RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO1D (Homo sapiens)

Ensembl gene IDs: ENSG00000176658

Ensembl transcript IDs: ENST00000318217.10, ENST00000394649.8, ENST00000577252.5, ENST00000577352.5, ENST00000577576.1, ENST00000579584.5, ENST00000580538.5, ENST00000580547.1, ENST00000581059.5, ENST00000582217.1, ENST00000582751.1, ENST00000583611.5, ENST00000583621.1, ENST00000584232.5, ENST00000585094.1, ENST00000623444.1

Found 850 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCATCCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTaGCCCGCTTCCTGCTTCCCGTCATCCCGTGTCTTGACCCCGCCC +
Preference number: 1 (lower is better)
Translates to: ASWPGLQCQDPTLCC*PASCFPSSRVLTPP
Trigger: GGGCGGGGTCAAGACACGGGATGACGGGAAGCAGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGGATGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 90 bp CCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAGCAGCTaGACTGGGACCCAGGACTCGGAGTGTGGCCGGGCTCCGGGCCAG +
Preference number: 1 (lower is better)
Translates to: PSQQVSSGHGLGGSS*TGTQDSECGRAPGQ
Trigger: CTGGCCCGGAGCCCGGCCACACTCCGAGTCCTGGGTCCCAGTCCAGCTGCTGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR TCA 90 bp CACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTGGCTaGGGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTG +
Preference number: 1 (lower is better)
Translates to: HSAGWAVPLLPLAPG*GAGPVGDSAHPVAL
Trigger: CAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCCTCAGCCAGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 90 bp GCCACGGGGCATCCGCACCAACTAAAGGCACCATCCAGTTGCCTCTaGGGTGAGATTGGTCTGGACGTCAGCCCAGGGGTCTGGGCGGGG +
Preference number: 1 (lower is better)
Translates to: ATGHPHQLKAPSSCL*GEIGLDVSPGVWAG
Trigger: CCCCGCCCAGACCCCTGGGCTGACGTCCAGACCAATCTCACCCCAGAGGCAACTGGATGGTGCCTTTAGTTGGTGCGGATGCCCCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 90 bp GGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTCTGCTaGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTGGCTGAGGGGC +
Preference number: 1 (lower is better)
Translates to: GSLPGENLGRMDSLC*MGCSAPATGSWLRG
Trigger: GCCCCTCAGCCAGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 90 bp CACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTaGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGA +
Preference number: 1 (lower is better)
Translates to: HCPLQSGGQRPWWGP*WQRESPRGEPGKDG
Trigger: TCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR TCA 90 bp TGCTTCCCGTCATCCCGTGTCTTGACCCCGCCCTTGCTGTTTCTCTaGGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGGCCG +
Preference number: 1 (lower is better)
Translates to: CFPSSRVLTPPLLFL*VGNAAGGGPEGKRP
Trigger: CGGCCGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAGGGCGGGGTCAAGACACGGGATGACGGGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 90 bp AAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTCTaGTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTGGCTGAGG +
Preference number: 1 (lower is better)
Translates to: KGSLPGENLGRMDSL*WMGCSAPATGSWLR
Trigger: CCTCAGCCAGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 90 bp GCCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATaGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCT +
Preference number: 1 (lower is better)
Translates to: ALVAKGVSQGRTWEG*THSAGWAVPLLPLA
Trigger: AGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 90 bp CAGGAGGCTGCACACAGGCACTTGGTGGGTTCTGCCGGGTCAGGGTaGGAAGGCAGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTC +
Preference number: 1 (lower is better)
Translates to: QEAAHRHLVGSAGSG*EGRRSVCGRTGRSF
Trigger: GAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCTGCCTTCCCACCCTGACCCGGCAGAACCCACCAAGTGCCTGTGTGCAGCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 90 bp TGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCTCTaGCCACTCCACCTGAGGCGTTGGCTCCCTCCCCCTCATCCTCTC +
Preference number: 1 (lower is better)
Translates to: WQDGKKLQYIPLLHL*PLHLRRWLPPPHPL
Trigger: GAGAGGATGAGGGGGAGGGAGCCAACGCCTCAGGTGGAGTGGGCAGAGGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 90 bp TCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTaGCAAGCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGG +
Preference number: 1 (lower is better)
Translates to: SQKAPEAYVLLLGRN*QAGSAPWHQFHGRR
Trigger: CCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGCTTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 90 bp ACCACAGCCACAGGCTGCGAGTTAAGTAAGATGATCCTTGGAGCATaGCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGG +
Preference number: 1 (lower is better)
Translates to: TTATGCELSKMILGA*HTVLSRAVVRGPGG
Trigger: CCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGCATGCTCCAAGGATCATCTTACTTAACTCGCAGCCTGTGGCTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 90 bp TCTTTGTTGCAAACTGCACACAGTGCAATTTTTGGGAAGCAGGGATaGGGAGTGGGCATGAGACCGGGTTGTTGGGACCACTCTGGGGTC +
Preference number: 1 (lower is better)
Translates to: SLLQTAHSAIFGKQG*GVGMRPGCWDHSGV
Trigger: GACCCCAGAGTGGTCCCAACAACCCGGTCTCATGCCCACTCCCCATCCCTGCTTCCCAAAAATTGCACTGTGTGCAGTTTGCAACAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR TCA 90 bp TCTACAATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTaGCCGAGATCATACCCTAAATTCCTGATCCTTTTGCAGTTGCCA +
Preference number: 1 (lower is better)
Translates to: STIMPASFPLSARDT*PRSYPKFLILLQLP
Trigger: TGGCAACTGCAAAAGGATCAGGAATTTAGGGTATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATTGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 90 bp AGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTaGACACAGTGCAATTTTTGGGAAGCAGGGATGGGGAGTGGGCAT +
Preference number: 1 (lower is better)
Translates to: RVPKDRMPAGFFVAN*TQCNFWEAGMGSGH
Trigger: ATGCCCACTCCCCATCCCTGCTTCCCAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 90 bp GTCTGGGCGGGGCACCAGGGTCTTTGGCTTATTGAACAGGGACCGTaGACAGTAAGGACAGAGGAAGATGATACCAAAGGCAGAAAACCA +
Preference number: 1 (lower is better)
Translates to: VWAGHQGLWLIEQGP*TVRTEEDDTKGRKP
Trigger: TGGTTTTCTGCCTTTGGTATCATCTTCCTCTGTCCTTACTGTCCACGGTCCCTGTTCAATAAGCCAAAGACCCTGGTGCCCCGCCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 90 bp TTGCATTTCATTACATCAAGAGAACCCCCTCATTGTCTACAATCATaGCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGAT +
Preference number: 1 (lower is better)
Translates to: LHFITSREPPHCLQS*PLPFPSAPGTRDRD
Trigger: ATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGATGTAATGAAATGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 90 bp ATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTaGAAACTGCACACAGTGCAATTTTTGGGAAGCAGGGATGGGGAG +
Preference number: 1 (lower is better)
Translates to: MRKGSQGQDASGILC*KLHTVQFLGSRDGE
Trigger: CTCCCCATCCCTGCTTCCCAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR TCA 90 bp CCCTCAGCGCCCGGGACACGTGACCGAGATCATACCCTAAATTCCTaGTCCTTTTGCAGTTGCCACATACTGTGGCTTTTAGTACATCAT +
Preference number: 1 (lower is better)
Translates to: PSAPGTRDRDHTLNS*SFCSCHILWLLVHH
Trigger: ATGATGTACTAAAAGCCACAGTATGTGGCAACTGCAAAAGGATCAGGAATTTAGGGTATGATCTCGGTCACGTGTCCCGGGCGCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 90 bp CCTGCAAACGGTGAAAGTATCTATAAGAGGACCACAGCCACAGGCTaGGAGTTAAGTAAGATGATCCTTGGAGCATGCCACACTGTCCTC +
Preference number: 1 (lower is better)
Translates to: PANGESIYKRTTATG*ELSKMILGACHTVL
Trigger: GAGGACAGTGTGGCATGCTCCAAGGATCATCTTACTTAACTCGCAGCCTGTGGCTGTGGTCCTCTTATAGATACTTTCACCGTTTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR TCA 90 bp GTTCTCATTAGGGTTCCTGACCCAAGTGTGGTGACAGCAGGTATCTaGTTAGCAACCCTGCAAACGGTGAAAGTATCTATAAGAGGACCA +
Preference number: 1 (lower is better)
Translates to: VLIRVPDPSVVTAGI*LATLQTVKVSIRGP
Trigger: TGGTCCTCTTATAGATACTTTCACCGTTTGCAGGGTTGCTAATCAGATACCTGCTGTCACCACACTTGGGTCAGGAACCCTAATGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGCCAGGACTCGGAGTGTaGCCGGGCTCCGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLPGLGV*PGSGPG
Trigger: GCCTGGCCCGGAGCCCGGCCACACTCCGAGTCCTGG...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTCCTCTCCAGAGCGGTaGTCAGAGGCCCTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVSSPER*SEALVG
Trigger: CCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGA...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGGTGGGCATCCTGGCCTaGCCTGCAGTGCCAGGACCC +
Preference number: 2 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGVGILA*PAVPGP
Trigger: GGGTCCTGGCACTGCAGGCCAGGCCAGGATGCCCAC...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGGGCTGGGAGTTGGGTTaGGGTGGGTCCGCCGAACTC +
Preference number: 2 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGGWELG*GGSAEL
Trigger: GAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCC...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CAA 90 bp CTCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTaGGGAGGCAGCAGCTGGACTGGGACCCAGGACTCGGAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: LLWEGPSQQVSSGHG*GGSSWTGTQDSECG
Trigger: GCCACACTCCGAGTCCTGGGTCCCAGTCCAGCTGCTGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR TCA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTCGTCATCCCGTGTCTTaGCCCCGCCCTTGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: PGLACSARTPRCAAAPLPRHPVS*PRPCCF
Trigger: GAAACAGCAAGGGCGGGGTCAAGACACGGGATGACG...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGCCAGGACTCGGAGTGTaGCCGGGCTCCGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVPGLGV*PGSGPG
Trigger: GCCTGGCCCGGAGCCCGGCCACACTCCGAGTCCTGG...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGCTTGGGCAAGAGAGGTaGCTATGGGGCTCCCGCAGA +
Preference number: 2 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVLGQER*LWGSRR
Trigger: TCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAG...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGCCCAGTGGCTTTGGCTaGCGGCTGGGAGTTGGGTTG +
Preference number: 2 (lower is better)
Translates to: ATLSSPERWSEALVGALVPSGFG*RLGVGL
Trigger: CAACCCAACTCCCAGCCGCCAGCCAAAGCCACTGGG...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGACTCACTCTGCTGGATaGGCTGTTCCGCTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGTHSAG*AVPLLP
Trigger: TGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGT...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CAA 90 bp ACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTaGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGG +
Preference number: 2 (lower is better)
Translates to: TLSSPERWSEALVGA*VAKGVSQGRTWEGW
Trigger: CCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR TCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGGAAAGCGGCCGACCCTaGGGGCTGCCCTCACCCTGG +
Preference number: 2 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRESGRP*GLPSPW
Trigger: CCAGGGTGAGGGCAGCCCTCAGGGTCGGCCGCTTTC...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR TCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGCCCTTGCTGTTTCTCTaGGTAGGAAACGCAGCGGGA +
Preference number: 2 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGPLLFL*VGNAAG
Trigger: TCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAGGG...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGGGACACCTGTCCAGGTaGTCTGACTTGACCTGGCCA +
Preference number: 2 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLGHLSR*SDLTWP
Trigger: TGGCCAGGTCAAGTCAGAGCACCTGGACAGGTGTCC...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCTAGCGGGCATGGGTTaGGAGGCAGCAGCTGGACTG +
Preference number: 2 (lower is better)
Translates to: HLGQERWLWGSRRVGSCILAGMG*EAAAGL
Trigger: CAGTCCAGCTGCTGCCTCCCAACCCATGCCCGCTAG...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCTGCTCTGACTTGACCTaGCCACGGGGCATCCGCACC +
Preference number: 2 (lower is better)
Translates to: HLGQERWLWGSRRVGSCICSDLT*PRGIRT
Trigger: GGTGCGGATGCCCCGTGGCCAGGTCAAGTCAGAGCA...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATACAGGACCCCACGCTGTaGTGCTGCCCCGCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIQDPTL*CCPASC
Trigger: GCAGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTG...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGCTGGGTCCCCAGGGCTaGCTCACCTTGGGCAAGAGA +
Preference number: 2 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVLGPQG*LTLGKR
Trigger: TCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCCAG...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGGGCTGGGAGTTGGGTTaGGGTGGGTCCGCCGAACTC +
Preference number: 2 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRGWELG*GGSAEL
Trigger: GAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCC...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTACTCTGCTCACCCAGTaGCTTTGGCTGGCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPTLLTQ*LWLAAG
Trigger: CCCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGT...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR TCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCTGCCCTCCAGCCTTTaGCAGGCAACTCATTTGGCA +
Preference number: 2 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTLPSSL*QATHLA
Trigger: TGCCAAATGAGTTGCCTGTCAAAGGCTGGAGGGCAG...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAGGGGCTCCCGCAGAGTaGGGTCCTGCATCCCCACCC +
Preference number: 2 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQGAPAE*GPASPP
Trigger: GGGTGGGGATGCAGGACCCCACTCTGCGGGAGCCCC...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCGGGGCTCCCGCAGAGTaGGGTCCTGCATCCCCACCC +
Preference number: 2 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTGAPAE*GPASPP
Trigger: GGGTGGGGATGCAGGACCCCACTCTGCGGGAGCCCC...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CAA 90 bp CAGTGGGGAAGGTGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTaGCTGGGCAGAAACTGGCAAGCTGGCAGTGCTCCCTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: QWGRWSQKAPEAYVL*LGRNWQAGSAPWHQ
Trigger: CTGGTGCCAGGGAGCACTGCCAGCTTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCACCTTCCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR TCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCACCAGGCTTGGAGAATaGGAAAGGGTTCCCAAGGAC +
Preference number: 2 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTTRLGE*ERVPKD
Trigger: GTCCTTGGGAACCCTTTCTCATTCTCCAAGCCTGGT...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCAAGGCACCATCCAGTTaGCTCTGGGGTGAGATTGGT +
Preference number: 2 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTKAPSS*LWGEIG
Trigger: ACCAATCTCACCCCAGAGGCAACTGGATGGTGCCTT...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCCAGGACCCCACGCTGTaGTGCTGCCCCGCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCQDPTL*CCPASC
Trigger: GCAGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTG...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGCCTCTCTTGCACCTCTaGCCACTCCACCTGAGGCGT +
Preference number: 2 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRPLLHL*PLHLRR
Trigger: ACGCCTCAGGTGGAGTGGGCAGAGGTGCAAGAGAGG...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGGGAGTTGGGTTGGGGTaGGTCCGCCGAACTCTGAGC +
Preference number: 2 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKAGVGLG*VRRTLS
Trigger: GCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCC...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGCTCACCCAGTGGCTTTaGCTGGCGGCTGGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKALTQWL*LAAGSW
Trigger: CCAACTCCCAGCCGCCAGCCAAAGCCACTGGGTGAG...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATATCTGCCGGGTCAGGGTaGGAAGGCAGGAGAAGTGTC +
Preference number: 2 (lower is better)
Translates to: NHARFLSPQRPGHVTEIISAGSG*EGRRSV
Trigger: GACACTTCTCCTGCCTTCCCACCCTGACCCGGCAGA...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAGACCCCACGCTGTGCTaGTGCCCCGCTTCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSADPTLC*CPASCF
Trigger: GAAGCAGGAAGCGGGGCAGCAGCACAGCGTGGGGTC...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGAGTACATCCCTCTCTTaGACCTCTGCCCACTCCACC +
Preference number: 2 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRSTSLS*TSAHST
Trigger: GGTGGAGTGGGCAGAGGTGCAAGAGAGGGATGTACT...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAATGGTGGGGGCCTTGGTaGCAAAGGGAGTCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQWWGPW*QRESPR
Trigger: CCTGGGAGACTCCCTTTGCCACCAAGGCCCCCACCA...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAGGTGGTCAGAGGCCCTaGTGGGGGCCTTGGTGGCAA +
Preference number: 2 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSAGGQRP*WGPWWQ
Trigger: TTGCCACCAAGGCCCCCACCAGGGCCTCTGACCACC...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAGCTGGCAGTGCTCCCTaGCACCAGTTTCACGGGCGC +
Preference number: 2 (lower is better)
Translates to: SQGQDASGILCCKLHTVQAGSAP*HQFHGR
Trigger: GCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR TCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCAAGGACAGAGGAAGATaGTACCAAAGGCAGAAAACC +
Preference number: 2 (lower is better)
Translates to: HLGQERWLWGSRRVGSCIKDRGR*YQRQKT
Trigger: GGTTTTCTGCCTTTGGTATCATCTTCCTCTGTCCTT...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTAAGGCACCATCCAGTTaGCTCTGGGGTGAGATTGGT +
Preference number: 2 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTKAPSS*LWGEIG
Trigger: ACCAATCTCACCCCAGAGGCAACTGGATGGTGCCTT...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTGGGCTGTTCCGCTCCTaGCACTGGCTCCTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIGLFRS*HWLLAE
Trigger: CTCAGCCAGGAGCCAGTGGCAGGAGCGGAACAGCCC...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCCATCCTCTCACCACATaGCTGAGGCGTAGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCHPLTT*LRRRLP
Trigger: GGGGAGCCTACGCCTCAGGCATGTGGTGAGAGGATG...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCTGCTCTGACTTGACCTaGCCACGGGGCATCCGCACC +
Preference number: 2 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSCSDLT*PRGIRT
Trigger: GGTGCGGATGCCCCGTGGCCAGGTCAAGTCAGAGCA...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAGGAGTTGGGTTGGGGTaGGTCCGCCGAACTCTGAGC +
Preference number: 2 (lower is better)
Translates to: SQGQDASGILCCKLHTVQGVGLG*VRRTLS
Trigger: GCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCC...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAACTCTGCTCACCCAGTaGCTTTGGCTGGCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSATLLTQ*LWLAAG
Trigger: CCCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGT...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR TCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAACAGTTGCCTCTGGGGTaGGATTGGTCTGGACGTCAG +
Preference number: 2 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQQLPLG*DWSGRQ
Trigger: CTGACGTCCAGACCAATCTCACCCCAGAGGCAACTG...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTGCTGCCCCGCTTCCTaGTTCCCGTCATCCCGTGTC +
Preference number: 2 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAICCPAS*FPSSRV
Trigger: GACACGGGATGACGGGAAGCAGGAAGCGGGGCAGCA...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGCCCCTGAAGCATACGTaGTTTTGCTGGGCAGAAACT +
Preference number: 2 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRPLKHT*FCWAET
Trigger: AGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGG...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCGCATGGGGCATTTaGTCCCAGCCTCTACTTCCC +
Preference number: 2 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCTAWGI*SQPLLP
Trigger: GGGAAGTAGAGGCTGGGAGCAAATGCCCCATGCGGT...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATATTCCCAAGGACAGGATaGCAGCGGGATTCTTTGTTG +
Preference number: 2 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIFPRTG*QRDSLL
Trigger: CAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAACTAGCGGGCATGGGTTaGGAGGCAGCAGCTGGACTG +
Preference number: 2 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQLAGMG*EAAAGL
Trigger: CAGTCCAGCTGCTGCCTCCCAACCCATGCCCGCTAG...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAGGGGTGAGATTGGTCTaGACGTCAGCCCAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: SQGQDASGILCCKLHTVQGVRLV*TSAQGS
Trigger: AGACCCCTGGGCTGACGTCCAGACCAATCTCACCCC...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTCTGGGTCCCCAGGGCTaGCTCACCTTGGGCAAGAGA +
Preference number: 2 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAILGPQG*LTLGKR
Trigger: TCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCCAG...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTGGGCTGCCCTCACCCTaGCAGCTCCCCGTTCTCATT +
Preference number: 2 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIGLPSP*QLPVLI
Trigger: AATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCCC...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAACTCCACCTGAGGCGTTaGCTCCCTCCCCCTCATCCT +
Preference number: 2 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQLHLRR*LPPPHP
Trigger: AGGATGAGGGGGAGGGAGCCAACGCCTCAGGTGGAG...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCACTGCACACAGGCACTTaGTGGGTTCTGCCGGGTCAG +
Preference number: 2 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSALHTGT*WVLPGQ
Trigger: CTGACCCGGCAGAACCCACCAAGTGCCTGTGTGCAG...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCGGACACCTGTCCAGGTaGTCTGACTTGACCTGGCCA +
Preference number: 2 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSGHLSR*SDLTWP
Trigger: TGGCCAGGTCAAGTCAGAGCACCTGGACAGGTGTCC...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAAGGATGGACTCACTCTaGTGGATGGGCTGTTCCGCT +
Preference number: 2 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQRMDSL*WMGCSA
Trigger: AGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCT...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGACCACAGCCACAGGCTaGGAGTTAAGTAAGATGATC +
Preference number: 2 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRTTATG*ELSKMI
Trigger: GATCATCTTACTTAACTCGCAGCCTGTGGCTGTGGT...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAACATCCTCTCACCACATaGCTGAGGCGTAGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQHPLTT*LRRRLP
Trigger: GGGGAGCCTACGCCTCAGGCATGTGGTGAGAGGATG...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAACCATCCAGTTGCCTCTaGGGTGAGATTGGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQPSSCL*GEIGLD
Trigger: GTCCAGACCAATCTCACCCCAGAGGCAACTGGATGG...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTCTTGGGCAAGAGAGGTaGCTATGGGGCTCCCGCAGA +
Preference number: 2 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAILGQER*LWGSRR
Trigger: TCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAG...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGCCCAGTGGCTTTGGCTaGCGGCTGGGAGTTGGGTTG +
Preference number: 2 (lower is better)
Translates to: GQDASGILCCKLHTVQFLPSGFG*RLGVGL
Trigger: CAACCCAACTCCCAGCCGCCAGCCAAAGCCACTGGG...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCATTGCTGGGCAGAAACTaGCAAGCTGGCAGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSALLGRN*QAGSAP
Trigger: GGGAGCACTGCCAGCTTGCCAGTTTCTGCCCAGCAA...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR TCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTCAGTTGCCTCTGGGGTaGGATTGGTCTGGACGTCAG +
Preference number: 2 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIQLPLG*DWSGRQ
Trigger: CTGACGTCCAGACCAATCTCACCCCAGAGGCAACTG...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR TCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGCGTCATCCCGTGTCTTaGCCCCGCCCTTGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: GQDASGILCCKLHTVQFLRHPVS*PRPCCF
Trigger: GAAACAGCAAGGGCGGGGTCAAGACACGGGATGACG...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAGGGCACCAGGGTCTTTaGCTTATTGAACAGGGACCG +
Preference number: 2 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSAGHQGL*LIEQGP
Trigger: CGGTCCCTGTTCAATAAGCCAAAGACCCTGGTGCCC...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAATGGACTCACTCTGCTaGATGGGCTGTTCCGCTCCT +
Preference number: 2 (lower is better)
Translates to: SQGQDASGILCCKLHTVQMDSLC*MGCSAP
Trigger: AGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCAT...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATCCCAGGGGAGAACCTaGGAAGGATGGACTCACTCT +
Preference number: 2 (lower is better)
Translates to: SQGQDASGILCCKLHTVQSQGRT*EGWTHS
Trigger: AGAGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGA...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGCACACAGGCACTTGGTaGGTTCTGCCGGGTCAGGGT +
Preference number: 2 (lower is better)
Translates to: GQDASGILCCKLHTVQFLHTGTW*VLPGQG
Trigger: ACCCTGACCCGGCAGAACCCACCAAGTGCCTGTGTG...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR TCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAGTGACAGCAGGTATCTaGTTAGCAACCCTGCAAACG +
Preference number: 2 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQVTAGI*LATLQT
Trigger: CGTTTGCAGGGTTGCTAATCAGATACCTGCTGTCAC...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCATGATCCTTGGAGCATaGCACACTGTCCTCTCCAGA +
Preference number: 2 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTMILGA*HTVLSR
Trigger: TCTGGAGAGGACAGTGTGGCATGCTCCAAGGATCAT...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTCCATCCAGTTGCCTCTaGGGTGAGATTGGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIPSSCL*GEIGLD
Trigger: GTCCAGACCAATCTCACCCCAGAGGCAACTGGATGG...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAAGAACCTGGGAAGGATaGACTCACTCTGCTGGATGG +
Preference number: 2 (lower is better)
Translates to: SQGQDASGILCCKLHTVQRTWEG*THSAGW
Trigger: CCATCCAGCAGAGTGAGTCCATCCTTCCCAGGTTCT...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CAA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTaGTTGCAAACTGCACACAGTGCAATTTTTGGGAAGCAGGGATGG +
Preference number: 2 (lower is better)
Translates to: ENEKGFPRTGCQRDS*LQTAHSAIFGKQGW
Trigger: CCATCCCTGCTTCCCAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGAGAACCTGGGAAGGATaGACTCACTCTGCTGGATGG +
Preference number: 2 (lower is better)
Translates to: GQDASGILCCKLHTVQFLRTWEG*THSAGW
Trigger: CCATCCAGCAGAGTGAGTCCATCCTTCCCAGGTTCT...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACCACAGCCACAGGCTaGGAGTTAAGTAAGATGATC +
Preference number: 2 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQTTATG*ELSKMI
Trigger: GATCATCTTACTTAACTCGCAGCCTGTGGCTGTGGT...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTAAGCATACGTGCTTTTaGTGGGCAGAAACTGGCAAG +
Preference number: 2 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIKHTCF*WAETGK
Trigger: CTTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTT...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR GCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCAGCGGGATTCTTTGTTaGAAACTGCACACAGTGCAA +
Preference number: 2 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSSGILC*KLHTVQ
Trigger: TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCT...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR TCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAAAGGACAGAGGAAGATaGTACCAAAGGCAGAAAACC +
Preference number: 2 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQKDRGR*YQRQKT
Trigger: GGTTTTCTGCCTTTGGTATCATCTTCCTCTGTCCTT...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp TCCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTaGTGCTGCCCCGCTTCCTGCTTCCCGTCATCCCGT +
Preference number: 3 (lower is better)
Translates to: SWPGLQCQDPTL*CCPASCFPSSR
Trigger: ACGGGATGACGGGAAGCAGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp CCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTaGCCCGCTTCCTGCTTCCCGTCATCCCGTGTCTTG +
Preference number: 3 (lower is better)
Translates to: PGLQCQDPTLCC*PASCFPSSRVL
Trigger: CAAGACACGGGATGACGGGAAGCAGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 72 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATaGGGCTCCCGCAGAGTGGGGTCCTGCATCCCCACC +
Preference number: 3 (lower is better)
Translates to: PGLAHLGQERWL*GSRRVGSCIPT
Trigger: GGTGGGGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 72 bp TTGCTGGGCAGAAACTGGCAAGCTGGCAGTGCTCCCTaGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCC +
Preference number: 3 (lower is better)
Translates to: LLGRNWQAGSAP*HQFHGRRPQGA
Trigger: GGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGCTTGCCAGTTTCTGCCCAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGCGGCTGGGAGTTGGGTaGGGGTGGGTCCGCCGAACT +
Preference number: 3 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVRLGVG*GWVRRT
Trigger: AGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp AGGCGTTGGCTCCCTCCCCCTCATCCTCTCACCACATaGCTGAGGCGTAGGCTCCCCTCATCCTCTCACCGC +
Preference number: 3 (lower is better)
Translates to: RRWLPPPHPLTT*LRRRLPSSSHR
Trigger: GCGGTGAGAGGATGAGGGGAGCCTACGCCTCAGGCATGTGGTGAGAGGATGAGGGGGAGGGAGCCAACGCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp CTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTCTaGTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCC +
Preference number: 3 (lower is better)
Translates to: LPGENLGRMDSL*WMGCSAPATGS
Trigger: GGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 72 bp TCCTTGGAGCATGCCACACTGTCCTCTCCAGAGCGGTaGTCAGAGGCCCTGGTGGGGGCCTTGGTGGCAAAG +
Preference number: 3 (lower is better)
Translates to: SLEHATLSSPER*SEALVGALVAK
Trigger: CTTTGCCACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGCATGCTCCAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTGCCTCTGGGGTGAGATaGGTCTGGACGTCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPASGVR*VWTSAQ
Trigger: CTGGGCTGACGTCCAGACCAATCTCACCCCAGAGGC...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR TCA 72 bp GCACCAACTAAAGGCACCATCCAGTTGCCTCTGGGGTaGGATTGGTCTGGACGTCAGCCCAGGGGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: APTKGTIQLPLG*DWSGRQPRGLG
Trigger: GCCCAGACCCCTGGGCTGACGTCCAGACCAATCTCACCCCAGAGGCAACTGGATGGTGCCTTTAGTTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp GGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCTCTaGCCACTCCACCTGAGGCGTTGGCTCCCTCCCCCT +
Preference number: 3 (lower is better)
Translates to: GKKLQYIPLLHL*PLHLRRWLPPP
Trigger: AGGGGGAGGGAGCCAACGCCTCAGGTGGAGTGGGCAGAGGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 72 bp GCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATaGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTG +
Preference number: 3 (lower is better)
Translates to: AKGVSQGRTWEG*THSAGWAVPLL
Trigger: CAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATACACCGCATGGGGCATTaGCTCCCAGCCTCTACTTCC +
Preference number: 3 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIHRMGH*LPASTS
Trigger: GGAAGTAGAGGCTGGGAGCAAATGCCCCATGCGGTG...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATACATGAGACCGGGTTGTaGGGACCACTCTGGGGTCAG +
Preference number: 3 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIHETGL*GPLWGQ
Trigger: CTGACCCCAGAGTGGTCCCAACAACCCGGTCTCATG...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGCATGAGACCGGGTTGTaGGGACCACTCTGGGGTCAG +
Preference number: 3 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRHETGL*GPLWGQ
Trigger: CTGACCCCAGAGTGGTCCCAACAACCCGGTCTCATG...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR TCA 72 bp TCATCCCGTGTCTTGACCCCGCCCTTGCTGTTTCTCTaGGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGA +
Preference number: 3 (lower is better)
Translates to: SSRVLTPPLLFL*VGNAAGGGPEG
Trigger: TCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAGGGCGGGGTCAAGACACGGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp ACGGGGCATCCGCACCAACTAAAGGCACCATCCAGTTaGCTCTGGGGTGAGATTGGTCTGGACGTCAGCCCA +
Preference number: 3 (lower is better)
Translates to: TGHPHQLKAPSS*LWGEIGLDVSP
Trigger: TGGGCTGACGTCCAGACCAATCTCACCCCAGAGGCAACTGGATGGTGCCTTTAGTTGGTGCGGATGCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 72 bp CATCCGCACCAACTAAAGGCACCATCCAGTTGCCTCTaGGGTGAGATTGGTCTGGACGTCAGCCCAGGGGTC +
Preference number: 3 (lower is better)
Translates to: HPHQLKAPSSCL*GEIGLDVSPGV
Trigger: GACCCCTGGGCTGACGTCCAGACCAATCTCACCCCAGAGGCAACTGGATGGTGCCTTTAGTTGGTGCGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 72 bp GGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTaGGCAGAAACTGGCAAGCTGGCAGTGCTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: GLRRPLKHTCFC*AETGKLAVLPG
Trigger: GCCAGGGAGCACTGCCAGCTTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCGCTCACCCAGTGGCTTaGGCTGGCGGCTGGGAGTTG +
Preference number: 3 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCAHPVA*AGGWEL
Trigger: CAACTCCCAGCCGCCAGCCAAAGCCACTGGGTGAGC...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCGAAGCATACGTGCTTTaGCTGGGCAGAAACTGGCAA +
Preference number: 3 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTEAYVL*LGRNWQ
Trigger: TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTC...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCGCCTCTGGGGTGAGATaGGTCTGGACGTCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTASGVR*VWTSAQ
Trigger: CTGGGCTGACGTCCAGACCAATCTCACCCCAGAGGC...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCTCCAGGTGCTCTGACTaGACCTGGCCACGGGGCATC +
Preference number: 3 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTSRCSD*TWPRGI
Trigger: GATGCCCCGTGGCCAGGTCAAGTCAGAGCACCTGGA...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR TCA 72 bp AGGGGTCTGGGCGGGGCACCAGGGTCTTTGGCTTATTaGACAGGGACCGTGGACAGTAAGGACAGAGGAAGA +
Preference number: 3 (lower is better)
Translates to: RGLGGAPGSLAY*TGTVDSKDRGR
Trigger: TCTTCCTCTGTCCTTACTGTCCACGGTCCCTGTTCAATAAGCCAAAGACCCTGGTGCCCCGCCCAGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp GGTGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTaGTGGGCAGAAACTGGCAAGCTGGCAGTGCTCCCT +
Preference number: 3 (lower is better)
Translates to: GGLRRPLKHTCF*WAETGKLAVLP
Trigger: AGGGAGCACTGCCAGCTTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATCCAGGTGCTCTGACTaGACCTGGCCACGGGGCATC +
Preference number: 3 (lower is better)
Translates to: SQGQDASGILCCKLHTVQSRCSD*TWPRGI
Trigger: GATGCCCCGTGGCCAGGTCAAGTCAGAGCACCTGGA...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCCAGGGCTGGCTCACCTaGGGCAAGAGAGGTGGCTAT +
Preference number: 3 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTQGWLT*GKRGGY
Trigger: ATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTG...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAGCTCACCCAGTGGCTTaGGCTGGCGGCTGGGAGTTG +
Preference number: 3 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQAHPVA*AGGWEL
Trigger: CAACTCCCAGCCGCCAGCCAAAGCCACTGGGTGAGC...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCGCTGCACACAGGCACTaGGTGGGTTCTGCCGGGTCA +
Preference number: 3 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSAAHRH*VGSAGS
Trigger: TGACCCGGCAGAACCCACCAAGTGCCTGTGTGCAGC...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAGCTGCACACAGGCACTaGGTGGGTTCTGCCGGGTCA +
Preference number: 3 (lower is better)
Translates to: SQGQDASGILCCKLHTVQAAHRH*VGSAGS
Trigger: TGACCCGGCAGAACCCACCAAGTGCCTGTGTGCAGC...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR TCA 72 bp ATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTaGCCGAGATCATACCCTAAATTCCTGATCCTTTTG +
Preference number: 3 (lower is better)
Translates to: MPASFPLSARDT*PRSYPKFLILL
Trigger: CAAAAGGATCAGGAATTTAGGGTATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 72 bp CAAACTGCACACAGTGCAATTTTTGGGAAGCAGGGATaGGGAGTGGGCATGAGACCGGGTTGTTGGGACCAC +
Preference number: 3 (lower is better)
Translates to: QTAHSAIFGKQG*GVGMRPGCWDH
Trigger: GTGGTCCCAACAACCCGGTCTCATGCCCACTCCCCATCCCTGCTTCCCAAAAATTGCACTGTGTGCAGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCACAGTACATCCCTCTCTaGCACCTCTGCCCACTCCAC +
Preference number: 3 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSAQYIPL*HLCPLH
Trigger: GTGGAGTGGGCAGAGGTGCAAGAGAGGGATGTACTG...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGGGGCATGAGACCGGGTaGTTGGGACCACTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: GQDASGILCCKLHTVQFLGHETG*LGPLWG
Trigger: ACCCCAGAGTGGTCCCAACAACCCGGTCTCATGCCC...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp ATTACATCAAGAGAACCCCCTCATTGTCTACAATCATaGCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGT +
Preference number: 3 (lower is better)
Translates to: ITSREPPHCLQS*PLPFPSAPGTR
Trigger: ACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGATGTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CCA 72 bp GGGCACCAGGGTCTTTGGCTTATTGAACAGGGACCGTaGACAGTAAGGACAGAGGAAGATGATACCAAAGGC +
Preference number: 3 (lower is better)
Translates to: GHQGLWLIEQGP*TVRTEEDDTKG
Trigger: GCCTTTGGTATCATCTTCCTCTGTCCTTACTGTCCACGGTCCCTGTTCAATAAGCCAAAGACCCTGGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAACACACAGTGCAATTTTaGGGAAGCAGGGATGGGGAG +
Preference number: 3 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQHTVQF*GSRDGE
Trigger: CTCCCCATCCCTGCTTCCCAAAAATTGCACTGTGTG...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp ATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTaGAATTTTTGGGAAGCAGGGATGGGGAGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: MPAGFFVANCTQ*NFWEAGMGSGH
Trigger: ATGCCCACTCCCCATCCCTGCTTCCCAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp AAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTaGACACAGTGCAATTTTTGGGAAGCAGGGATGGGG +
Preference number: 3 (lower is better)
Translates to: KDRMPAGFFVAN*TQCNFWEAGMG
Trigger: CCCCATCCCTGCTTCCCAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp GGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTaGAAACTGCACACAGTGCAATTTTTGGGAAGCAGG +
Preference number: 3 (lower is better)
Translates to: GSQGQDASGILC*KLHTVQFLGSR
Trigger: CCTGCTTCCCAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR GCA 72 bp GGCTTGGAGAATGAGAAAGGGTTCCCAAGGACAGGATaGCAGCGGGATTCTTTGTTGCAAACTGCACACAGT +
Preference number: 3 (lower is better)
Translates to: GLENEKGFPRTG*QRDSLLQTAHS
Trigger: ACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTCCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR TCA 72 bp AGGGTTCCTGACCCAAGTGTGGTGACAGCAGGTATCTaGTTAGCAACCCTGCAAACGGTGAAAGTATCTATA +
Preference number: 3 (lower is better)
Translates to: RVPDPSVVTAGI*LATLQTVKVSI
Trigger: TATAGATACTTTCACCGTTTGCAGGGTTGCTAATCAGATACCTGCTGTCACCACACTTGGGTCAGGAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR-3UTR CAA 90 bp AGAGCAATCATAGAATTCTTAAACAAGGTAGCAGCAGTCAGAGGTCGCTTGGTCTCTGTAATGCTCAGTTaGCCTTCAGGCCACATATTC +
Preference number: 3 (lower is better)
Translates to: RAIIEFLNKVAAVRGRLVSVMLS*PSGHIF
Trigger: GAATATGTGGCCTGAAGGCAAACTGAGCATTACAGA...GACCAAGCGACCTCTGACTGCTGCTACCTTGTTTAAGAATTCTATGATTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
3UTR CCA 72 bp TACTTGGTGCCGGCAGCGTTCATCATCAAATATCTGTaGAGATTTCTTGTCATTGGGTTTGATGCAACGAAC +
Preference number: 3 (lower is better)
Translates to: YLVPAAFIIKYL*RFLVIGFDATN
Trigger: GTTCGTTGCATCAAACCCAATGACAAGAAATCTCCACAGATATTTGATGATGAACGCTGCCGGCACCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
3UTR TCA 72 bp AACATGTTGCCCATTATAACAGTAAATTCTGCACACTaGGAGACTTCAAACTTTCCTTTCACATCAATTCTA +
Preference number: 3 (lower is better)
Translates to: NMLPIITVNSAH*ETSNFPFTSIL
Trigger: TAGAATTGATGTGAAAGGAAAGTTTGAAGTCTCTCAGTGTGCAGAATTTACTGTTATAATGGGCAACATGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCGAAAGCGGCCGACCCTaGGGGCTGCCCTCACCCTGG +
Preference number: 4 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRESGRP*GLPSPW
Trigger: CCAGGGTGAGGGCAGCCCTCAGGGTCGGCCGCTTTC...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGGGGGCTCCCGCAGAGTaGGGTCCTGCATCCCCACCC +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGGAPAE*GPASPP
Trigger: GGGTGGGGATGCAGGACCCCACTCTGCGGGAGCCCC...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGGGGGCTCCCGCAGAGTaGGGTCCTGCATCCCCACCC +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWGAPAE*GPASPP
Trigger: GGGTGGGGATGCAGGACCCCACTCTGCGGGAGCCCC...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGTCCTGTGGCCTCAGCTaGGAGGCCCTGGCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGSCGLS*EALALG
Trigger: CCCCAGCGCCAGGGCCTCCCAGCTGAGGCCACAGGA...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGCAGGACCCCACGCTGTaGTGCTGCCCCGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGQDPTL*CCPASC
Trigger: GCAGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTG...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGCCCTCCCAGGCCCTCTaGAGCCCGAGGTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWPSQAL*SPRSAL
Trigger: AAGGGCTGACCTCGGGCTCCAGAGGGCCTGGGAGGG...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCACCAGGACTCGGAGTGTaGCCGGGCTCCGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAPGLGV*PGSGPG
Trigger: GCCTGGCCCGGAGCCCGGCCACACTCCGAGTCCTGG...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGCACGGCTGCAACCTTTaGCCTGACCTGGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVHGCNL*PDLGQV
Trigger: GACCTGCCCCAGGTCAGGGCAAAGGTTGCAGCCGTG...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGCTAGCGGGCATGGGTTaGGAGGCAGCAGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVLAGMG*EAAAGL
Trigger: CAGTCCAGCTGCTGCCTCCCAACCCATGCCCGCTAG...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGGTTGCTAATCTGGGCTaGGGGCACCTCTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVVANLG*GHLCLC
Trigger: GCACAGGCAGAGGTGCCCTCAGCCCAGATTAGCAAC...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCACATCCTGGCCTGGCCTaGAGTGCCAGGACCCCACGC +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAHPGLA*SARTPR
Trigger: GCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGGATG...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGACCTTTGCCCTGACCTaGGGCAGGTCTGAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGTFALT*GRSEAG
Trigger: TCCGGCCTCAGACCTGCCCCAGGTCAGGGCAAAGGT...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCACCCTCCCAGGCCCTCTaGAGCCCGAGGTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAPSQAL*SPRSAL
Trigger: AAGGGCTGACCTCGGGCTCCAGAGGGCCTGGGAGGG...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCTTGGTGAAGTCGGGCTaGGGCTGGTTGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRLVKSG*GWLSRV
Trigger: GACGCGGCTCAACCAGCCCCAGCCCGACTTCACCAA...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGCTAGCGGGCATGGGTTaGGAGGCAGCAGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWLAGMG*EAAAGL
Trigger: CAGTCCAGCTGCTGCCTCCCAACCCATGCCCGCTAG...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGCTGGGTCCCCAGGGCTaGCTCACCTTGGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWLGPQG*LTLGKR
Trigger: TCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCCAG...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGCTCACCCAGTGGCTTTaGCTGGCGGCTGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGLTQWL*LAAGSW
Trigger: CCAACTCCCAGCCGCCAGCCAAAGCCACTGGGTGAG...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCTGGTGGGGGCCTTGGTaGCAAAGGGAGTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRWWGPW*QRESPR
Trigger: CCTGGGAGACTCCCTTTGCCACCAAGGCCCCCACCA...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGCTCCACCTGAGGCGTTaGCTCCCTCCCCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWLHLRR*LPPPHP
Trigger: AGGATGAGGGGGAGGGAGCCAACGCCTCAGGTGGAG...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGAGCGCCCGGGACACGTaGCCGAGATCATACCCTAAA +
Preference number: 4 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVSARDT*PRSYPK
Trigger: TTTAGGGTATGATCTCGGTCACGTGTCCCGGGCGCT...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGCTGTTCCGCTCCTaGCACTGGCTCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSGLFRS*HWLLAE
Trigger: CTCAGCCAGGAGCCAGTGGCAGGAGCGGAACAGCCC...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGACCGCATGGGGCATTTaGTCCCAGCCTCTACTTCCC +
Preference number: 4 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVTAWGI*SQPLLP
Trigger: GGGAAGTAGAGGCTGGGAGCAAATGCCCCATGCGGT...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAAAGTCGGGCTGGGGCTaGTTGAGCCGCGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAKSGWG*LSRVST
Trigger: CGTGGAGACGCGGCTCAACCAGCCCCAGCCCGACTT...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGGGGGTGAGATTGGTCTaGACGTCAGCCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWGVRLV*TSAQGS
Trigger: AGACCCCTGGGCTGACGTCCAGACCAATCTCACCCC...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCGTGGGCATCCTGGCCTaGCCTGCAGTGCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASVGILA*PAVPGP
Trigger: GGGTCCTGGCACTGCAGGCCAGGCCAGGATGCCCAC...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGTTGTTGGGACCACTCTaGGGTCAGGCCCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWLLGPL*GQALGE
Trigger: CTCACCCAGGGCCTGACCCCAGAGTGGTCCCAACAA...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGCAGTTGCCTCTGGGGTaGGATTGGTCTGGACGTCAG +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWQLPLG*DWSGRQ
Trigger: CTGACGTCCAGACCAATCTCACCCCAGAGGCAACTG...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTTGGCAAAGGCGTCTCTaGCGTAGCTGGCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: PGLACSARTPRCAAAPLPWQRRL*RSWPLV
Trigger: AACAAGAGGCCAGCTACGGCAGAGACGCCTTTGCCA...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGATGGTCTTGACGCCATaGAAGCGTCTGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGMVLTP*KRLATS
Trigger: CGAGGTGGCCAGACGCTTCCATGGCGTCAAGACCAT...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTTTGGTGAAGTCGGGCTaGGGCTGGTTGAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSLVKSG*GWLSRV
Trigger: GACGCGGCTCAACCAGCCCCAGCCCGACTTCACCAA...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTCCAGGACTCGGAGTGTaGCCGGGCTCCGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTPGLGV*PGSGPG
Trigger: GCCTGGCCCGGAGCCCGGCCACACTCCGAGTCCTGG...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCATGCTCTGACTTGACCTaGCCACGGGGCATCCGCACC +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEACSDLT*PRGIRT
Trigger: GGTGCGGATGCCCCGTGGCCAGGTCAAGTCAGAGCA...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCGGCTGGGAGTTGGGTTaGGGTGGGTCCGCCGAACTC +
Preference number: 4 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTGWELG*GGSAEL
Trigger: GAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCC...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGCCCAGTGGCTTTGGCTaGCGGCTGGGAGTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVPSGFG*RLGVGL
Trigger: CAACCCAACTCCCAGCCGCCAGCCAAAGCCACTGGG...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAGGGCTGCCCTCACCCTaGCAGCTCCCCGTTCTCATT +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAGLPSP*QLPVLI
Trigger: AATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCCC...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGGCTCAGTGGGGAAGGTaGTCTCAGAAGGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGAQWGR*SQKAPE
Trigger: TTCAGGGGCCTTCTGAGACCACCTTCCCCACTGAGC...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGTCTGCCGGGTCAGGGTaGGAAGGCAGGAGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLSAGSG*EGRRSV
Trigger: GACACTTCTCCTGCCTTCCCACCCTGACCCGGCAGA...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCGCACTTGGTGGGTTCTaGCGGGTCAGGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASALGGF*RVRVGR
Trigger: CCTTCCCACCCTGACCCGGCAGAACCCACCAAGTGC...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTTCTCCTGCTCCGCCATaGCGCCAGCGCGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTSPAPP*RQRGGS
Trigger: TGAGCCCCCGCGCTGGCGCCATGGCGGAGCAGGAGA...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318217.10
CDS-3UTR CCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCACCTTTGCCCTGACCTaGGGCAGGTCTGAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: HLGQERWLWGSRRVGSCITFALT*GRSEAG
Trigger: TCCGGCCTCAGACCTGCCCCAGGTCAGGGCAAAGGT...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCGGGCACCAGGGTCTTTaGCTTATTGAACAGGGACCG +
Preference number: 4 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRGHQGL*LIEQGP
Trigger: CGGTCCCTGTTCAATAAGCCAAAGACCCTGGTGCCC...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGGTGAGATTGGTCTaGACGTCAGCCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVGVRLV*TSAQGS
Trigger: AGACCCCTGGGCTGACGTCCAGACCAATCTCACCCC...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGAGGGCTGGCTCACCTTaGGCAAGAGAGGTGGCTATG +
Preference number: 4 (lower is better)
Translates to: ATLSSPERWSEALVGALVRAGSP*AREVAM
Trigger: CATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCT...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCGGAGTTGGGTTGGGGTaGGTCCGCCGAACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HLGQERWLWGSRRVGSCIGVGLG*VRRTLS
Trigger: GCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCC...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCACTCTGCTCACCCAGTaGCTTTGGCTGGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTTLLTQ*LWLAAG
Trigger: CCCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGT...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCACTCTGCTCACCCAGTaGCTTTGGCTGGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HLGQERWLWGSRRVGSCITLLTQ*LWLAAG
Trigger: CCCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGT...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGTCCCAGGGGAGAACCTaGGAAGGATGGACTCACTCT +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWSQGRT*EGWTHS
Trigger: AGAGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGA...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGCATCCTCTCACCGCATaGGGCATTTGCTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ATLSSPERWSEALVGALVHPLTA*GICSQP
Trigger: AGGCTGGGAGCAAATGCCCCATGCGGTGAGAGGATG...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGTCTGCCGGGTCAGGGTaGGAAGGCAGGAGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVSAGSG*EGRRSV
Trigger: GACACTTCTCCTGCCTTCCCACCCTGACCCGGCAGA...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATATCCTGTGGCCTCAGCTaGGAGGCCCTGGCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NHARFLSPQRPGHVTEIISCGLS*EALALG
Trigger: CCCCAGCGCCAGGGCCTCCCAGCTGAGGCCACAGGA...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGGACAGCCTCTTTGTCTaGAGGAAGGTCATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGDSLFV*RKVMVG
Trigger: CCCAACCATGACCTTCCTTCAGACAAAGAGGCTGTC...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCGTCATCCCGTGTCTTaGCCCCGCCCTTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTRHPVS*PRPCCF
Trigger: GAAACAGCAAGGGCGGGGTCAAGACACGGGATGACG...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCGTCTCAGAAGGCCCCTaGAGCATACGTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRVSEGP*SIRAFA
Trigger: AGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGAC...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCCTCTCACCACATGCCTaGGGCGTAGGCTCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASLSPHA*GVGSPH
Trigger: ATGAGGGGAGCCTACGCCTCAGGCATGTGGTGAGAG...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCACCAGGCTTGGAGAATaGGAAAGGGTTCCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRTRLGE*ERVPKD
Trigger: GTCCTTGGGAACCCTTTCTCATTCTCCAAGCCTGGT...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGGCATGCGGGCCAGGGTaGCCCGCCACACCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVACGPG*PATPFV
Trigger: TACAAAAGGTGTGGCGGGGCACCCTGGCCCGCATGC...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTGGGCTGTTCCGCTCCTaGCACTGGCTCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPGLFRS*HWLLAE
Trigger: CTCAGCCAGGAGCCAGTGGCAGGAGCGGAACAGCCC...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCGCCATGGAAGCGTCTaGCCACCTCGTGGATGTACG +
Preference number: 4 (lower is better)
Translates to: HLGQERWLWGSRRVGSCIRHGSV*PPRGCT
Trigger: CGTACATCCACGAGGTGGCCAGACGCTTCCATGGCG...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCGCCATGGAAGCGTCTaGCCACCTCGTGGATGTACG +
Preference number: 4 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTRHGSV*PPRGCT
Trigger: CGTACATCCACGAGGTGGCCAGACGCTTCCATGGCG...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAACTTTAGGAGGGCTTaGCCACTTCACGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRNFRRA*PLHVLP
Trigger: GGGAAGCACGTGAAGTGGCCAAGCCCTCCTAAAGTT...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTAAGTCGGGCTGGGGCTaGTTGAGCCGCGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPKSGWG*LSRVST
Trigger: CGTGGAGACGCGGCTCAACCAGCCCCAGCCCGACTT...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGCCATCCAGTTGCCTCTaGGGTGAGATTGGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: ATLSSPERWSEALVGALVPSSCL*GEIGLD
Trigger: GTCCAGACCAATCTCACCCCAGAGGCAACTGGATGG...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTAGGGCTGGCTCACCTTaGGCAAGAGAGGTGGCTATG +
Preference number: 4 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSRAGSP*AREVAM
Trigger: CATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCT...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGCCCAGTGGCTTTGGCTaGCGGCTGGGAGTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVPSGFG*RLGVGL
Trigger: CAACCCAACTCCCAGCCGCCAGCCAAAGCCACTGGG...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGATGGACTCACTCTGCTaGATGGGCTGTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLMDSLC*MGCSAP
Trigger: AGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCAT...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCTGCACACAGGCACTTaGTGGGTTCTGCCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HLGQERWLWGSRRVGSCILHTGT*WVLPGQ
Trigger: CTGACCCGGCAGAACCCACCAAGTGCCTGTGTGCAG...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGATGAGACCGGGTTGTTaGGACCACTCTGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVMRPGC*DHSGVR
Trigger: CCTGACCCCAGAGTGGTCCCAACAACCCGGTCTCAT...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGGCACCATCCAAAGGCTaGGAGGAAAGAACCCAAACC +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGAPSKG*EERTQT
Trigger: GGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGC...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCGCACCATCCAAAGGCTaGGAGGAAAGAACCCAAACC +
Preference number: 4 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRAPSKG*EERTQT
Trigger: GGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGC...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCTCAACCTCTGCTCTCTaGCTGGGGTTGGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTSTSAL*LGLVMA
Trigger: GGCCATCACCAACCCCAGTCAGAGAGCAGAGGTTGA...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGAAAGTGCCTGAGGTCTaGGGTGTATCTGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVKVPEV*GVSGFE
Trigger: TTCAAAGCCAGATACACCTCAGACCTCAGGCACTTT...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTATCCCTTTGTGCTGTTaGTCCACGAGGTCAACAATG +
Preference number: 4 (lower is better)
Translates to: PGLACSARTPRCAAAPLPIPLCC*STRSTM
Trigger: CATTGTTGACCTCGTGGAGCAACAGCACAAAGGGAT...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGGCAATGATCCCTTTGTaGTGTTGCTCCACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWAMIPL*CCSTRS
Trigger: TGACCTCGTGGAGCAACAGCACAAAGGGATCATTGC...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGCGGAAGGCAAATCCTaGCCGACGCACTCTCACATT +
Preference number: 4 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSAEGKS*PTHSHI
Trigger: AATGTGAGAGTGCGTCGGGCAGGATTTGCCTTCCGC...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGTTGAAGCAAGATAGTTaGCCTCCCAGGCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLLKQDS*PPRPSG
Trigger: TCCAGAGGGCCTGGGAGGGCAACTATCTTGCTTCAA...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCGTGCACTTCTTCCCGTaGAGGCTGCACTGTACTGGG +
Preference number: 4 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTVHFFP*RLHCTG
Trigger: CCCAGTACAGTGCAGCCTGCACGGGAAGAAGTGCAC...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGAAGGCACCATCCAGTTaGCTCTGGGGTGAGATTGGT +
Preference number: 4 (lower is better)
Translates to: ATLSSPERWSEALVGALVKAPSS*LWGEIG
Trigger: ACCAATCTCACCCCAGAGGCAACTGGATGGTGCCTT...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTACCACAGCCACAGGCTaGGAGTTAAGTAAGATGATC +
Preference number: 4 (lower is better)
Translates to: PGLACSARTPRCAAAPLPTTATG*ELSKMI
Trigger: GATCATCTTACTTAACTCGCAGCCTGTGGCTGTGGT...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGCAGGACCCCACGCTGTaGTGCTGCCCCGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKAQDPTL*CCPASC
Trigger: GCAGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTG...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAAGTACATCCCTCTCTTaGACCTCTGCCCACTCCACC +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEASTSLS*TSAHST
Trigger: GGTGGAGTGGGCAGAGGTGCAAGAGAGGGATGTACT...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGTTCCCAAGGACAGGATaGCAGCGGGATTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGFPRTG*QRDSLL
Trigger: CAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTCATTGTCTACAATCATaGCCGCTTCCTTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PGLACSARTPRCAAAPLPHCLQS*PLPFPS
Trigger: TGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATG...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTCCAATTCGACTCTCATaGGTTGGCTGTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PGLACSARTPRCAAAPLPPIRLS*VGCLLK
Trigger: CTTCAGCAAACAGCCAACCCATGAGAGTCGAATTGG...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTTGCTCTGACTTGACCTaGCCACGGGGCATCCGCACC +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPCSDLT*PRGIRT
Trigger: GGTGCGGATGCCCCGTGGCCAGGTCAAGTCAGAGCA...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGCTTGGGCAAGAGAGGTaGCTATGGGGCTCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVLGQER*LWGSRR
Trigger: TCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAG...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGAGAACCTGGGAAGGATaGACTCACTCTGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: ATLSSPERWSEALVGALVRTWEG*THSAGW
Trigger: CCATCCAGCAGAGTGAGTCCATCCTTCCCAGGTTCT...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATAGGTGGTCAGAGGCCCTaGTGGGGGCCTTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIGGQRP*WGPWWQ
Trigger: TTGCCACCAAGGCCCCCACCAGGGCCTCTGACCACC...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGCAGGAGAAGTGTCTGTaGCAGGACGGGAAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: ATLSSPERWSEALVGALVQEKCL*QDGKKL
Trigger: AAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCTG...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGCACACAGGCACTTGGTaGGTTCTGCCGGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVHTGTW*VLPGQG
Trigger: ACCCTGACCCGGCAGAACCCACCAAGTGCCTGTGTG...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGGCAGCTGACCAGGCTTaGAGAATGAGAAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLAADQA*RMRKGS
Trigger: GGAACCCTTTCTCATTCTCCAAGCCTGGTCAGCTGC...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCTGTGCTGCTTGTCAATaGTGTCACGGCCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASCAACQ*CHGLWP
Trigger: TGGCCACAGGCCGTGACATCATTGACAAGCAGCACA...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTCATCAAGGATTGCAATaGTCCCTTTGTGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PGLACSARTPRCAAAPLPHQGLQ*SLCAVA
Trigger: AGCAACAGCACAAAGGGATCATTGCAATCCTTGATG...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCCGAGGTCAGCCCTTTaGCCCTTCAACATTTCCACG +
Preference number: 4 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTPRSAL*PFNIST
Trigger: CGTGGAAATGTTGAAGGGTCAAAGGGCTGACCTCGG...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGACAGGTGACGGTCAGTaGCAAAAATTGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVTGDGQ*QKLLCL
Trigger: AAGACAGAGCAATTTTTGTCACTGACCGTCACCTGT...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGTTGGTGACGTTCACTTaGAGGTGGCGCTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVLVTFT*RWRFSL
Trigger: GAGTGAGAAGCGCCACCTTCAAGTGAACGTCACCAA...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTACTGTACTGGGTTGGTaGCGTTCACTTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSTVLGW*RSLEGG
Trigger: GCCACCTTCAAGTGAACGTCACCAACCCAGTACAGT...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGCCGAGCGATTCTTGGTaGAGTCGGGCTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRPSDSW*SRAGAG
Trigger: ACCAGCCCCAGCCCGACTTCACCAAGAATCGCTCGG...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCCCCTTGCTGTTTCTCTaGGTAGGAAACGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASPLLFL*VGNAAG
Trigger: TCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAGGG...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTCGTCATCCCGTGTCTTaGCCCCGCCCTTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPRHPVS*PRPCCF
Trigger: GAAACAGCAAGGGCGGGGTCAAGACACGGGATGACG...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTGTTGCTAATCTGGGCTaGGGGCACCTCTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPVANLG*GHLCLC
Trigger: GCACAGGCAGAGGTGCCCTCAGCCCAGATTAGCAAC...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGCACTCTTTCAACCTCTaGTCTCTGACTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLHSFNL*SLTGVG
Trigger: ACCAACCCCAGTCAGAGAGCAGAGGTTGAAAGAGTG...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTTCTTGTTCTGTGTGCTaGTTGTCAATGATGTCACGG +
Preference number: 4 (lower is better)
Translates to: PGLACSARTPRCAAAPLPSCSVC*LSMMSR
Trigger: CCGTGACATCATTGACAAGCAGCACACAGAACAAGA...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGCTATTGAAAATCGTCTaGAGGGCCTCCTCAAAACGG +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGLLKIV*RASSKR
Trigger: CCGTTTTGAGGAGGCCCTGCAGACGATTTTCAATAG...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGCAACAGGGACAAAAGTaGCTGAGGTCTGAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWQQGQK*LRSEVY
Trigger: ATACACCTCAGACCTCAGGCACTTTTGTCCCTGTTG...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTTGCTGCCCCGCTTCCTaGTTCCCGTCATCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTCCPAS*FPSSRV
Trigger: GACACGGGATGACGGGAAGCAGGAAGCGGGGCAGCA...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGGCACTTGGTGGGTTCTaGCGGGTCAGGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRALGGF*RVRVGR
Trigger: CCTTCCCACCCTGACCCGGCAGAACCCACCAAGTGC...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAAACTTTAGGAGGGCTTaGCCACTTCACGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEANFRRA*PLHVLP
Trigger: GGGAAGCACGTGAAGTGGCCAAGCCCTCCTAAAGTT...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTCAGGCTGCACTGTACTaGGTTGGTGACGTTCACTTG +
Preference number: 4 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSQAALY*VGDVHL
Trigger: CAAGTGAACGTCACCAACCCAGTACAGTGCAGCCTG...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCGGGCACCAGGGTCTTTaGCTTATTGAACAGGGACCG +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASGHQGL*LIEQGP
Trigger: CGGTCCCTGTTCAATAAGCCAAAGACCCTGGTGCCC...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTCTGGGTCCCCAGGGCTaGCTCACCTTGGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTLGPQG*LTLGKR
Trigger: TCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCCAG...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGGGAGTTGGGTTGGGGTaGGTCCGCCGAACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRGVGLG*VRRTLS
Trigger: GCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCC...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTGGGCTGCCCTCACCCTaGCAGCTCCCCGTTCTCATT +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTGLPSP*QLPVLI
Trigger: AATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCCC...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCGACAGCCTCTTTGTCTaGAGGAAGGTCATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: HLGQERWLWGSRRVGSCIDSLFV*RKVMVG
Trigger: CCCAACCATGACCTTCCTTCAGACAAAGAGGCTGTC...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCTTGGTGACGTTCACTTaGAGGTGGCGCTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASLVTFT*RWRFSL
Trigger: GAGTGAGAAGCGCCACCTTCAAGTGAACGTCACCAA...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGTGACAGCAGGTATCTaGTTAGCAACCCTGCAAACG +
Preference number: 4 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSVTAGI*LATLQT
Trigger: CGTTTGCAGGGTTGCTAATCAGATACCTGCTGTCAC...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCGAAAGCGGCCGACCCTaGGGGCTGCCCTCACCCTGG +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSESGRP*GLPSPW
Trigger: CCAGGGTGAGGGCAGCCCTCAGGGTCGGCCGCTTTC...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGCTCTCACCACATGCCTaGGGCGTAGGCTCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRLSPHA*GVGSPH
Trigger: ATGAGGGGAGCCTACGCCTCAGGCATGTGGTGAGAG...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTCACGGCCTTTATACTaGTCAATTGTGTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVSRPLY*SIVSLP
Trigger: TGGAAGAGACACAATTGAGCAGTATAAAGGCCGTGA...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTTCTCCACGGAGACGGTaGACTTCTTCCCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTSPRRR*TSSRAG
Trigger: GCCTGCACGGGAAGAAGTGCACCGTCTCCGTGGAGA...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGATGATCCTTGGAGCATaGCACACTGTCCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVMILGA*HTVLSR
Trigger: TCTGGAGAGGACAGTGTGGCATGCTCCAAGGATCAT...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAATGATCCTTGGAGCATaGCACACTGTCCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAMILGA*HTVLSR
Trigger: TCTGGAGAGGACAGTGTGGCATGCTCCAAGGATCAT...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGTGCTGCCCCGCTTCCTaGTTCCCGTCATCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKACCPAS*FPSSRV
Trigger: GACACGGGATGACGGGAAGCAGGAAGCGGGGCAGCA...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTCCCCTGAAGCATACGTaGTTTTGCTGGGCAGAAACT +
Preference number: 4 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSPLKHT*FCWAET
Trigger: AGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGG...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATACATCCTCTCACCACATaGCTGAGGCGTAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIHPLTT*LRRRLP
Trigger: GGGGAGCCTACGCCTCAGGCATGTGGTGAGAGGATG...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCATTCCCAAGGACAGGATaGCAGCGGGATTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAFPRTG*QRDSLL
Trigger: CAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAAAGCTTCTTTCTCCTaGCTGTTGCACAATCACTCG +
Preference number: 4 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRKASFS*LLHNHS
Trigger: CGAGTGATTGTGCAACAGCCAGGAGAAAGAAGCTTT...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCACACAGAGCTTTCGGCTaGAAAAATGGGCGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAHRAFG*KNGRVC
Trigger: GCAAACACGCCCATTTTTCCAGCCGAAAGCTCTGTG...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGTTGTCAGAGCTGCCTTaGTTCTTTTGTACCGCATGC +
Preference number: 4 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLLSELP*FFCTAC
Trigger: GCATGCGGTACAAAAGAACCAAGGCAGCTCTGACAA...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCAGAACCTGGGAAGGATaGACTCACTCTGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASRTWEG*THSAGW
Trigger: CCATCCAGCAGAGTGAGTCCATCCTTCCCAGGTTCT...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGCTCCACCTGAGGCGTTaGCTCCCTCCCCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKALHLRR*LPPPHP
Trigger: AGGATGAGGGGGAGGGAGCCAACGCCTCAGGTGGAG...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTCTGCACACAGGCACTTaGTGGGTTCTGCCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTLHTGT*WVLPGQ
Trigger: CTGACCCGGCAGAACCCACCAAGTGCCTGTGTGCAG...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCGCAGCTGACCAGGCTTaGAGAATGAGAAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASAADQA*RMRKGS
Trigger: GGAACCCTTTCTCATTCTCCAAGCCTGGTCAGCTGC...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CAA 72 bp TGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTaGCACCTCTGCCCACTCCACCTGAGGCGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: WQDGKKLQYIPL*HLCPLHLRRWL
Trigger: GAGCCAACGCCTCAGGTGGAGTGGGCAGAGGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGACTGTACTGGGTTGGTaGCGTTCACTTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVTVLGW*RSLEGG
Trigger: GCCACCTTCAAGTGAACGTCACCAACCCAGTACAGT...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATCTGCCCACTCCACCTaGGGCGTTGGCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQSAHST*GVGSLP
Trigger: GGGGAGGGAGCCAACGCCTCAGGTGGAGTGGGCAGA...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGCATACCCTAAATTCCTaGTCCTTTTGCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: ATLSSPERWSEALVGALVHTLNS*SFCSCH
Trigger: GTGGCAACTGCAAAAGGATCAGGAATTTAGGGTATG...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTGCACGAAGTCTGCCTTaGCGAATTCCAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPARSLP*RIPGSP
Trigger: AGGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGC...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318217.10
CDS-3UTR GCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAAAGGCGCTCATATATTaGCTTGGCAAAGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAKALIY*LGKGVS
Trigger: AGAGACGCCTTTGCCAAGGCAATATATGAGCGCCTT...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCGCAATGATCCCTTTGTaGTGTTGCTCCACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HLGQERWLWGSRRVGSCIAMIPL*CCSTRS
Trigger: TGACCTCGTGGAGCAACAGCACAAAGGGATCATTGC...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATAGGACACCTGTCCAGGTaGTCTGACTTGACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIGHLSR*SDLTWP
Trigger: TGGCCAGGTCAAGTCAGAGCACCTGGACAGGTGTCC...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAACATCCTGGCCTGGCCTaGAGTGCCAGGACCCCACGC +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQHPGLA*SARTPR
Trigger: GCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGGATG...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGCCAAGATATTCTACTTaGTGCCGGCAGCGTTCATCA +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVPRYST*CRQRSS
Trigger: TGATGAACGCTGCCGGCACCAAGTAGAATATCTTGG...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCATCTGAAGGAAGGTCATaGTTGGGCCAGGTGAATTCA +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEASEGRS*LGQVNS
Trigger: TGAATTCACCTGGCCCAACCATGACCTTCCTTCAGA...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCTCGACTCTCATGGGTTaGCTGTTTGCTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: HLGQERWLWGSRRVGSCISTLMG*LFAEEA
Trigger: TGCCTCTTCAGCAAACAGCCAACCCATGAGAGTCGA...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGACTCACTCTGCTGGATaGGCTGTTCCGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRTHSAG*AVPLLP
Trigger: TGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGT...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGGCTCAGTGGGGAAGGTaGTCTCAGAAGGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRAQWGR*SQKAPE
Trigger: TTCAGGGGCCTTCTGAGACCACCTTCCCCACTGAGC...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGAAACATTTCATCGGTaGCTTTGCCGACATTCATGC +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVETFHR*LCRHSC
Trigger: GCATGAATGTCGGCAAAGTCACCGATGAAATGTTTC...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGCTTGAGCACAGGATTTaGACTGTTATACATAAGGCG +
Preference number: 4 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLLEHRI*TVIHKA
Trigger: CGCCTTATGTATAACAGTTCAAATCCTGTGCTCAAG...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCACAGGCCACATATTCTTaGGCACAGGATTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAQATYS*AQDLNC
Trigger: ACAGTTCAAATCCTGTGCTCAAGAATATGTGGCCTG...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGCCGAGGTCAGCCCTTTaGCCCTTCAACATTTCCACG +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRPRSAL*PFNIST
Trigger: CGTGGAAATGTTGAAGGGTCAAAGGGCTGACCTCGG...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGTTTACCTTACGGACGTaGCAGGAAAAGAGGACATTC +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVFTLRT*QEKRTF
Trigger: GAATGTCCTCTTTTCCTGTCACGTCCGTAAGGTAAA...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTCCATTTTATACAGGTaGCGGTCAGTGACAAAAATT +
Preference number: 4 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVSILYR*RSVTKI
Trigger: AATTTTTGTCACTGACCGTCACCTGTATAAAATGGA...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGGTGACAGCAGGTATCTaGTTAGCAACCCTGCAAACG +
Preference number: 4 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVVTAGI*LATLQT
Trigger: CGTTTGCAGGGTTGCTAATCAGATACCTGCTGTCAC...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGCCCTTGCTGTTTCTCTaGGTAGGAAACGCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRPLLFL*VGNAAG
Trigger: TCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAGGG...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTCTGCCCACTCCACCTaGGGCGTTGGCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAISAHST*GVGSLP
Trigger: GGGGAGGGAGCCAACGCCTCAGGTGGAGTGGGCAGA...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGCCTCTTGTTCTGTGTaGTGCTTGTCAATGATGTCA +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVASCSV*CLSMMS
Trigger: TGACATCATTGACAAGCAGCACACAGAACAAGAGGC...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGCTTGATGAGCTGGGATaGTCTCCATCTATTGAAAAT +
Preference number: 4 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGLDELG*SPSIEN
Trigger: ATTTTCAATAGATGGAGAGCATCCCAGCTCATCAAG...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTAGGATGGACTCACTCTaGTGGATGGGCTGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTRMDSL*WMGCSA
Trigger: AGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCT...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGATCTTATACACTGTTTaGATCTCCTCAGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVILYTV*ISSGLK
Trigger: CTTCAAACCTGAGGAGATCCAAACAGTGTATAAGAT...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCTCTGAAGGAAGGTCATaGTTGGGCCAGGTGAATTCA +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASSEGRS*LGQVNS
Trigger: TGAATTCACCTGGCCCAACCATGACCTTCCTTCAGA...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCATCCTTATGAGCATCTaGGCACGGAGTTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASILMSI*ARSSSK
Trigger: CTTGGAAGAACTCCGTGCCCAGATGCTCATAAGGAT...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAGTGGGCATCCTGGCCTaGCCTGCAGTGCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQVGILA*PAVPGP
Trigger: GGGTCCTGGCACTGCAGGCCAGGCCAGGATGCCCAC...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTCAGGAGAAGTGTCTGTaGCAGGACGGGAAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPQEKCL*QDGKKL
Trigger: AAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCTG...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCGCGTATTTTAAAAGCTaGGTGATCATGACACAAAGC +
Preference number: 4 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRAYFKS*VIMTQS
Trigger: GCTTTGTGTCATGATCACCCAGCTTTTAAAATACGC...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394649.8
3UTR CAA 72 bp AGGTGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTaGCTGGGCAGAAACTGGCAAGCTGGCAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: RWSQKAPEAYVL*LGRNWQAGSAP
Trigger: GGGAGCACTGCCAGCTTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTGCAATAGCAAAAAGGTaGGGCGGTCTCTCATACAGC +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPAIAKR*GGLSYS
Trigger: GCTGTATGAGAGACCGCCTCACCTTTTTGCTATTGC...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATATCTGACTGGGGTTGGTaGTGGCCGCAATATACTGCA +
Preference number: 4 (lower is better)
Translates to: NHARFLSPQRPGHVTEIISDWGW*WPQYTA
Trigger: TGCAGTATATTGCGGCCATCACCAACCCCAGTCAGA...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCCATCAAGGATTGCAATaGTCCCTTTGTGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASHQGLQ*SLCAVA
Trigger: AGCAACAGCACAAAGGGATCATTGCAATCCTTGATG...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTCTTGAGCACAGGATTTaGACTGTTATACATAAGGCG +
Preference number: 4 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSLEHRI*TVIHKA
Trigger: CGCCTTATGTATAACAGTTCAAATCCTGTGCTCAAG...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTAGGGACAAAAGTGCCTaGGGTCTGAGGTGTATCTGG +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTRDKSA*GLRCIW
Trigger: CCAGATACACCTCAGACCTCAGGCACTTTTGTCCCT...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAACCGAGCGATTCTTGGTaGAGTCGGGCTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQPSDSW*SRAGAG
Trigger: ACCAGCCCCAGCCCGACTTCACCAAGAATCGCTCGG...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCCATACCCTAAATTCCTaGTCCTTTTGCAGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASHTLNS*SFCSCH
Trigger: GTGGCAACTGCAAAAGGATCAGGAATTTAGGGTATG...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGGGTGGATTAAATGACTaGCGTTGTGACTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: ATLSSPERWSEALVGALVGGLND*RCDFIS
Trigger: AGAAATGAAGTCACAACGTCAGTCATTTAATCCACC...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS-3UTR GCA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTTTAAATTTCCCAAGTaGAGAATAGCAGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVFKFPK*RIAAKI
Trigger: GATTTTGGCTGCTATTCTGCACTTGGGAAATTTAAA...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCTCTTGTTCTGTGTGCTaGTTGTCAATGATGTCACGG +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASSCSVC*LSMMSR
Trigger: CCGTGACATCATTGACAAGCAGCACACAGAACAAGA...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATACAACATTTCCACGGCTaGAACCTTTGCCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIQHFHG*NLCPDL
Trigger: CAGGTCAGGGCAAAGGTTGCAGCCGTGGAAATGTTG...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAGACCCCACGCTGTGCTaGTGCCCCGCTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQDPTLC*CPASCF
Trigger: GAAGCAGGAAGCGGGGCAGCAGCACAGCGTGGGGTC...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCAGCGGGATTCTTTGTTaGAAACTGCACACAGTGCAA +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASSGILC*KLHTVQ
Trigger: TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCT...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTCTCCTGCTCCGCCATaGCGCCAGCGCGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMSPAPP*RQRGGS
Trigger: TGAGCCCCCGCGCTGGCGCCATGGCGGAGCAGGAGA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCATCTTATACACTGTTTaGATCTCCTCAGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRILYTV*ISSGLK
Trigger: CTTCAAACCTGAGGAGATCCAAACAGTGTATAAGAT...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGCGTCTCTGCCGTAGCTaGCCTCTTGTTCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKARLCRS*PLVLCA
Trigger: AGCACACAGAACAAGAGGCCAGCTACGGCAGAGACG...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAGGCTGGGAGTTGGGTTaGGGTGGGTCCGCCGAACTC +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQGWELG*GGSAEL
Trigger: GAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCC...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAACTCACCCAGTGGCTTTaGCTGGCGGCTGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQLTQWL*LAAGSW
Trigger: CCAACTCCCAGCCGCCAGCCAAAGCCACTGGGTGAG...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCTGGTGGGGGCCTTGGTaGCAAAGGGAGTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSWWGPW*QRESPR
Trigger: CCTGGGAGACTCCCTTTGCCACCAAGGCCCCCACCA...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAGGTGGTCAGAGGCCCTaGTGGGGGCCTTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQGGQRP*WGPWWQ
Trigger: TTGCCACCAAGGCCCCCACCAGGGCCTCTGACCACC...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTCCTCTCCAGAGCGGTaGTCAGAGGCCCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAISSPER*SEALVG
Trigger: CCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGA...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAGCTGGCAGTGCTCCCTaGCACCAGTTTCACGGGCGC +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQAGSAP*HQFHGR
Trigger: GCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCCACACAGGCACTTGGTaGGTTCTGCCGGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTHTGTW*VLPGQG
Trigger: ACCCTGACCCGGCAGAACCCACCAAGTGCCTGTGTG...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGTCTGACTGGGGTTGGTaGTGGCCGCAATATACTGCA +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKASDWGW*WPQYTA
Trigger: TGCAGTATATTGCGGCCATCACCAACCCCAGTCAGA...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCTCAACCTCTGCTCTCTaGCTGGGGTTGGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTSTSAL*LGLVMA
Trigger: GGCCATCACCAACCCCAGTCAGAGAGCAGAGGTTGA...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGTCTTGTCATTGGGTTTaGTGCAACGAACGTAATATG +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVSCHWV*CNERNM
Trigger: CATATTACGTTCGTTGCATCAAACCCAATGACAAGA...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTAGAGGACAATCCTTATaGGCATCTGGGCACGGAGTT +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTRGQSL*ASGHGV
Trigger: AACTCCGTGCCCAGATGCTCATAAGGATTGTCCTCT...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGGGCGCTTCTCACTCTTaGAATGATTCACCAGCACTC +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRGASHS*NDSPAL
Trigger: GAGTGCTGGTGAATCATTTCAAGAGTGAGAAGCGCC...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCCAGTTGCCTCTGGGGTaGGATTGGTCTGGACGTCAG +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTQLPLG*DWSGRQ
Trigger: CTGACGTCCAGACCAATCTCACCCCAGAGGCAACTG...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAAATTCCAGGCTCTCCTaGTCCGCCATGGCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQNSRLS*SAMAPA
Trigger: CGCTGGCGCCATGGCGGAGCAGGAGAGCCTGGAATT...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318217.10
CDS-3UTR GCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCTTTGCCGACATTCATaGAAGCATCATCAAGGATTG +
Preference number: 4 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTLCRHS*KHHQGL
Trigger: CAATCCTTGATGATGCTTGCATGAATGTCGGCAAAG...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAGCATGCGGGCCAGGGTaGCCCGCCACACCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQACGPG*PATPFV
Trigger: TACAAAAGGTGTGGCGGGGCACCCTGGCCCGCATGC...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTCTTGATGAGCTGGGATaGTCTCCATCTATTGAAAAT +
Preference number: 4 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSLDELG*SPSIEN
Trigger: ATTTTCAATAGATGGAGAGCATCCCAGCTCATCAAG...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAACACGGCTGCAACCTTTaGCCTGACCTGGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQHGCNL*PDLGQV
Trigger: GACCTGCCCCAGGTCAGGGCAAAGGTTGCAGCCGTG...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGAAGGCACCATCCAGTTaGCTCTGGGGTGAGATTGGT +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKAKAPSS*LWGEIG
Trigger: ACCAATCTCACCCCAGAGGCAACTGGATGGTGCCTT...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCGGACACCTGTCCAGGTaGTCTGACTTGACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCGHLSR*SDLTWP
Trigger: TGGCCAGGTCAAGTCAGAGCACCTGGACAGGTGTCC...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCCATCCTCTCACCACATaGCTGAGGCGTAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSHPLTT*LRRRLP
Trigger: GGGGAGCCTACGCCTCAGGCATGTGGTGAGAGGATG...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAACCTCTCTTGCACCTCTaGCCACTCCACCTGAGGCGT +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQPLLHL*PLHLRR
Trigger: ACGCCTCAGGTGGAGTGGGCAGAGGTGCAAGAGAGG...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGCCCTTTTTCAAATCTTaGCAGTTCTTAGATGAGAAT +
Preference number: 4 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWPFFKS*QFLDEN
Trigger: ATTCTCATCTAAGAACTGGCAAGATTTGAAAAAGGG...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS-3UTR CCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATACACAGAGCTTTCGGCTaGAAAAATGGGCGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIHRAFG*KNGRVC
Trigger: GCAAACACGCCCATTTTTCCAGCCGAAAGCTCTGTG...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAATGGTCTTGACGCCATaGAAGCGTCTGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQMVLTP*KRLATS
Trigger: CGAGGTGGCCAGACGCTTCCATGGCGTCAAGACCAT...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTTCGACTCTCATGGGTTaGCTGTTTGCTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTSTLMG*LFAEEA
Trigger: TGCCTCTTCAGCAAACAGCCAACCCATGAGAGTCGA...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCCTTGGGCAAGAGAGGTaGCTATGGGGCTCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSLGQER*LWGSRR
Trigger: TCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAG...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAACTCACTCTGCTGGATaGGCTGTTCCGCTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQTHSAG*AVPLLP
Trigger: TGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGT...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTCATACGTGCTTTTGCTaGGCAGAAACTGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTHTCFC*AETGKL
Trigger: CAGCTTGCCAGTTTCTGCCCAGCAAAAGCACGTATG...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTGTTGGGACCACTCTaGGGTCAGGCCCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQLLGPL*GQALGE
Trigger: CTCACCCAGGGCCTGACCCCAGAGTGGTCCCAACAA...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCATGAGACCGGGTTGTTaGGACCACTCTGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTMRPGC*DHSGVR
Trigger: CCTGACCCCAGAGTGGTCCCAACAACCCGGTCTCAT...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAATTTGGGAAGCAGGGATaGGGAGTGGGCATGAGACCG +
Preference number: 4 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQFGKQG*GVGMRP
Trigger: CGGTCTCATGCCCACTCCCCATCCCTGCTTCCCAAA...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGTGTCTACTGGTAATTaGCAAAACTATGAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSVSTGN*QNYECC
Trigger: GCAACACTCATAGTTTTGCCAATTACCAGTAGACAC...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGTTTCTTCATTTGAGCTaGGCACTAAGGAGGCTTAAT +
Preference number: 4 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVFLHLS*ALRRLN
Trigger: ATTAAGCCTCCTTAGTGCCCAGCTCAAATGAAGAAA...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS-3UTR TCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCAATACAAGTGTCTTTTaGTCGCCTCTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASNTSVF*SPLHSL
Trigger: AAGGCTATGAAGAGGCGATCAAAAGACACTTGTATT...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAAGTCTCGCATGGTCTTaGCGCCATGGAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQSLAWS*RHGSVW
Trigger: CCAGACGCTTCCATGGCGTCAAGACCATGCGAGACT...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCAGTCTCGCATGGTCTTaGCGCCATGGAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSSLAWS*RHGSVW
Trigger: CCAGACGCTTCCATGGCGTCAAGACCATGCGAGACT...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTGACCTGGGGCAGGTCTaGGGCCGGAATGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIDLGQV*GRNALD
Trigger: ATCAAGAGCATTCCGGCCTCAGACCTGCCCCAGGTC...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATAAGGTGTATCTGGCTTTaGAGCAAGATAGTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIRCIWL*SKIVAL
Trigger: GAGGGCAACTATCTTGCTTCAAAGCCAGATACACCT...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTACAGGTGACGGTCAGTaGCAAAAATTGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPTGDGQ*QKLLCL
Trigger: AAGACAGAGCAATTTTTGTCACTGACCGTCACCTGT...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCGCAACTCATTTGGCATaGTCTGTTTTGGTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTATHLA*SVLVCL
Trigger: TAAACACACCAAAACAGATCATGCCAAATGAGTTGC...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAACTGCCCTCCAGCCTTTaGCAGGCAACTCATTTGGCA +
Preference number: 4 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQLPSSL*QATHLA
Trigger: TGCCAAATGAGTTGCCTGTCAAAGGCTGGAGGGCAG...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAAGCGCCCGGGACACGTaGCCGAGATCATACCCTAAA +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQSARDT*PRSYPK
Trigger: TTTAGGGTATGATCTCGGTCACGTGTCCCGGGCGCT...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCTGGCAAAGGCGTCTCTaGCGTAGCTGGCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTWQRRL*RSWPLV
Trigger: AACAAGAGGCCAGCTACGGCAGAGACGCCTTTGCCA...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCGTGCACTTCTTCCCGTaGAGGCTGCACTGTACTGGG +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSVHFFP*RLHCTG
Trigger: CCCAGTACAGTGCAGCCTGCACGGGAAGAAGTGCAC...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTCTCCACGGAGACGGTaGACTTCTTCCCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAISPRRR*TSSRAG
Trigger: GCCTGCACGGGAAGAAGTGCACCGTCTCCGTGGAGA...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGCCCCTGAAGCATACGTaGTTTTGCTGGGCAGAAACT +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKAPLKHT*FCWAET
Trigger: AGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGG...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTCCTCTCTTGCACCTCTaGCCACTCCACCTGAGGCGT +
Preference number: 4 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIPLLHL*PLHLRR
Trigger: ACGCCTCAGGTGGAGTGGGCAGAGGTGCAAGAGAGG...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCAGTACATCCCTCTCTTaGACCTCTGCCCACTCCACC +
Preference number: 4 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCSTSLS*TSAHST
Trigger: GGTGGAGTGGGCAGAGGTGCAAGAGAGGGATGTACT...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTAGCGGGATTCTTTGTTaGAAACTGCACACAGTGCAA +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPSGILC*KLHTVQ
Trigger: TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCT...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp AACCTAACAGACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGTCTCCTGCTCCGCCATaGCGCCAGCGCGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: NLTDRYKPVSPRGSSHKVSPAPP*RQRGGS
Trigger: TGAGCCCCCGCGCTGGCGCCATGGCGGAGCAGGAGA...CACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTCTGTTAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATAGTTGGTCCTTTCCATTaGAGACACTCAGACCAGTCA +
Preference number: 4 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIVGPFH*RHSDQS
Trigger: TGACTGGTCTGAGTGTCTCCAATGGAAAGGACCAAC...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCTTTGGGAAGCAGGGATaGGGAGTGGGCATGAGACCG +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSFGKQG*GVGMRP
Trigger: CGGTCTCATGCCCACTCCCCATCCCTGCTTCCCAAA...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCGTGTCTACTGGTAATTaGCAAAACTATGAGTGTTGC +
Preference number: 4 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASVSTGN*QNYECC
Trigger: GCAACACTCATAGTTTTGCCAATTACCAGTAGACAC...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGAGTTGCCACATACTGTaGCTTTTAGTACATCATAAA +
Preference number: 4 (lower is better)
Translates to: ATLSSPERWSEALVGALVSCHIL*LLVHHK
Trigger: TTTATGATGTACTAAAAGCCACAGTATGTGGCAACT...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTTTTTCCAAACCTGCTTaGGTTGTCATTACGGTTGGT +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPFSKPA*VVITVG
Trigger: ACCAACCGTAATGACAACTCAAGCAGGTTTGGAAAA...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCTGTGCTGCTTGTCAATaGTGTCACGGCCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSCAACQ*CHGLWP
Trigger: TGGCCACAGGCCGTGACATCATTGACAAGCAGCACA...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTGAAACATTTCATCGGTaGCTTTGCCGACATTCATGC +
Preference number: 4 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTETFHR*LCRHSC
Trigger: GCATGAATGTCGGCAAAGTCACCGATGAAATGTTTC...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGTCTTGTCATTGGGTTTaGTGCAACGAACGTAATATG +
Preference number: 4 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVSCHWV*CNERNM
Trigger: CATATTACGTTCGTTGCATCAAACCCAATGACAAGA...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAAGCGCCGGTAGTACCTaGTTATTGTCAGAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQSAGST*LLSELP
Trigger: AGGCAGCTCTGACAATAATCAGGTACTACCGGCGCT...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCAGCGCCGGTAGTACCTaGTTATTGTCAGAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCSAGST*LLSELP
Trigger: AGGCAGCTCTGACAATAATCAGGTACTACCGGCGCT...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGGACCTGGGGCAGGTCTaGGGCCGGAATGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: GQDASGILCCKLHTVQFLDLGQV*GRNALD
Trigger: ATCAAGAGCATTCCGGCCTCAGACCTGCCCCAGGTC...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCTCCATTTTATACAGGTaGCGGTCAGTGACAAAAATT +
Preference number: 4 (lower is better)
Translates to: HLGQERWLWGSRRVGSCISILYR*RSVTKI
Trigger: AATTTTTGTCACTGACCGTCACCTGTATAAAATGGA...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTTTCTCACTCTTGAAATaGTTCACCAGCACTCCAACA +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPFSLLK*FTSTPT
Trigger: TGTTGGAGTGCTGGTGAATCATTTCAAGAGTGAGAA...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATAAAGGACAGAGGAAGATaGTACCAAAGGCAGAAAACC +
Preference number: 4 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIKDRGR*YQRQKT
Trigger: GGTTTTCTGCCTTTGGTATCATCTTCCTCTGTCCTT...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCACCAGGCTTGGAGAATaGGAAAGGGTTCCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTTRLGE*ERVPKD
Trigger: GTCCTTGGGAACCCTTTCTCATTCTCCAAGCCTGGT...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGAATTCCAGGCTCTCCTaGTCCGCCATGGCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMNSRLS*SAMAPA
Trigger: CGCTGGCGCCATGGCGGAGCAGGAGAGCCTGGAATT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAGCGGAAGGCAAATCCTaGCCGACGCACTCTCACATT +
Preference number: 4 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSAAEGKS*PTHSHI
Trigger: AATGTGAGAGTGCGTCGGGCAGGATTTGCCTTCCGC...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGGCATGCGGGCCAGGGTaGCCCGCCACACCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMACGPG*PATPFV
Trigger: TACAAAAGGTGTGGCGGGGCACCCTGGCCCGCATGC...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGCACGGCTGCAACCTTTaGCCTGACCTGGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMHGCNL*PDLGQV
Trigger: GACCTGCCCCAGGTCAGGGCAAAGGTTGCAGCCGTG...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCTTCTTTGTTGCAAACTaGACACAGTGCAATTTTTGG +
Preference number: 4 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTFFVAN*TQCNFW
Trigger: CCAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAA...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAACGTCTCTGCCGTAGCTaGCCTCTTGTTCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQRLCRS*PLVLCA
Trigger: AGCACACAGAACAAGAGGCCAGCTACGGCAGAGACG...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAATCATCAAATATCTGTaGAGATTTCTTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAIIKYL*RFLVIG
Trigger: CCCAATGACAAGAAATCTCCACAGATATTTGATGAT...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGATCCTTATGAGCATCTaGGCACGGAGTTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKAILMSI*ARSSSK
Trigger: CTTGGAAGAACTCCGTGCCCAGATGCTCATAAGGAT...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGTTGTCAGAGCTGCCTTaGTTCTTTTGTACCGCATGC +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKALSELP*FFCTAC
Trigger: GCATGCGGTACAAAAGAACCAAGGCAGCTCTGACAA...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTGCTGGGCAGAAACTaGCAAGCTGGCAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAILLGRN*QAGSAP
Trigger: GGGAGCACTGCCAGCTTGCCAGTTTCTGCCCAGCAA...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAACATCCTCTCACCGCATaGGGCATTTGCTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQHPLTA*GICSQP
Trigger: AGGCTGGGAGCAAATGCCCCATGCGGTGAGAGGATG...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCCGACGACTTCTCCAATaGACGTATAGATGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCRRLLQ*TYRCAL
Trigger: AAGGGCGCATCTATACGTTCATTGGAGAAGTCGTCG...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGTTCGGGGTGTTCGAATaGAAATTTTGGTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRFGVFE*KFWSSH
Trigger: ATGGGAAGACCAAAATTTTCATTCGAACACCCCGAA...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAAGAGGACAATCCTTATaGGCATCTGGGCACGGAGTT +
Preference number: 4 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQRGQSL*ASGHGV
Trigger: AACTCCGTGCCCAGATGCTCATAAGGATTGTCCTCT...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGGACCTGGGGCAGGTCTaGGGCCGGAATGCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMDLGQV*GRNALD
Trigger: ATCAAGAGCATTCCGGCCTCAGACCTGCCCCAGGTC...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAAGGGACAAAAGTGCCTaGGGTCTGAGGTGTATCTGG +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQRDKSA*GLRCIW
Trigger: CCAGATACACCTCAGACCTCAGGCACTTTTGTCCCT...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCGGCGCTTCTCACTCTTaGAATGATTCACCAGCACTC +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTGASHS*NDSPAL
Trigger: GAGTGCTGGTGAATCATTTCAAGAGTGAGAAGCGCC...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTGCAACTCATTTGGCATaGTCTGTTTTGGTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPATHLA*SVLVCL
Trigger: TAAACACACCAAAACAGATCATGCCAAATGAGTTGC...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCCATCAGCACGAAGTCTaGCTTGCCGAATTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSHQHEV*LAEFQA
Trigger: AGCCTGGAATTCGGCAAGGCAGACTTCGTGCTGATG...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318217.10
CDS-3UTR GCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGGCCTCTTGTTCTGTGTaGTGCTTGTCAATGATGTCA +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKAASCSV*CLSMMS
Trigger: TGACATCATTGACAAGCAGCACACAGAACAAGAGGC...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTGAAGCAAGATAGTTaGCCTCCCAGGCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQLKQDS*PPRPSG
Trigger: TCCAGAGGGCCTGGGAGGGCAACTATCTTGCTTCAA...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGACCGCATGGGGCATTTaGTCCCAGCCTCTACTTCCC +
Preference number: 4 (lower is better)
Translates to: GQDASGILCCKLHTVQFLTAWGI*SQPLLP
Trigger: GGGAAGTAGAGGCTGGGAGCAAATGCCCCATGCGGT...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCGCTCATATATTGCCTTaGCAAAGGCGTCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCAHILP*QRRLCR
Trigger: ACGGCAGAGACGCCTTTGCCAAGGCAATATATGAGC...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAGCTCATATATTGCCTTaGCAAAGGCGTCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQAHILP*QRRLCR
Trigger: ACGGCAGAGACGCCTTTGCCAAGGCAATATATGAGC...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAAACTTCTCGTATGTCTaGCGGAAGGCAAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQNFSYV*RKANPA
Trigger: GGCAGGATTTGCCTTCCGCCAGACATACGAGAAGTT...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCACGTCTGGCCACCTCGTaGATGTACGACTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSARLATS*MYDFTL
Trigger: CAAAGTGAAGTCGTACATCCACGAGGTGGCCAGACG...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGCGCCATGGAAGCGTCTaGCCACCTCGTGGATGTACG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMRHGSV*PPRGCT
Trigger: CGTACATCCACGAGGTGGCCAGACGCTTCCATGGCG...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCACAGGCTGCACTGTACTaGGTTGGTGACGTTCACTTG +
Preference number: 4 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSAQAALY*VGDVHL
Trigger: CAAGTGAACGTCACCAACCCAGTACAGTGCAGCCTG...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAATGGACTCACTCTGCTaGATGGGCTGTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQMDSLC*MGCSAP
Trigger: AGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCAT...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTCCCAGGGGAGAACCTaGGAAGGATGGACTCACTCT +
Preference number: 4 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAISQGRT*EGWTHS
Trigger: AGAGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGA...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCACACAAAGCTGGATTTaGGAACCCCAGCCTAGGGTA +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTTQSWI*EPQPRV
Trigger: TACCCTAGGCTGGGGTTCCCAAATCCAGCTTTGTGT...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS-3UTR TCA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCACGACGACTTCTCCAATaGACGTATAGATGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSARRLLQ*TYRCAL
Trigger: AAGGGCGCATCTATACGTTCATTGGAGAAGTCGTCG...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGAATACAAGTGTCTTTTaGTCGCCTCTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRNTSVF*SPLHSL
Trigger: AAGGCTATGAAGAGGCGATCAAAAGACACTTGTATT...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGGTTCAATTAGTTTCTTaGCAGCCTCTTTGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRVQLVS*QPLCLK
Trigger: CTTCAGACAAAGAGGCTGTCAAGAAACTAATTGAAC...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGTTCGGGGTGTTCGAATaGAAATTTTGGTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKAFGVFE*KFWSSH
Trigger: ATGGGAAGACCAAAATTTTCATTCGAACACCCCGAA...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCAGGTGTATCTGGCTTTaGAGCAAGATAGTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTRCIWL*SKIVAL
Trigger: GAGGGCAACTATCTTGCTTCAAAGCCAGATACACCT...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCAAAGTGCCTGAGGTCTaGGGTGTATCTGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCKVPEV*GVSGFE
Trigger: TTCAAAGCCAGATACACCTCAGACCTCAGGCACTTT...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAACAACATTTCCACGGCTaGAACCTTTGCCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQQHFHG*NLCPDL
Trigger: CAGGTCAGGGCAAAGGTTGCAGCCGTGGAAATGTTG...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGAGGATGGACTCACTCTaGTGGATGGGCTGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: GQDASGILCCKLHTVQFLRMDSL*WMGCSA
Trigger: AGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCT...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCAAGCATACGTGCTTTTaGTGGGCAGAAACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCKHTCF*WAETGK
Trigger: CTTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTT...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCCATTGTCTACAATCATaGCCGCTTCCTTTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCHCLQS*PLPFPS
Trigger: TGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATG...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAACGTCTGGCCACCTCGTaGATGTACGACTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQRLATS*MYDFTL
Trigger: CAAAGTGAAGTCGTACATCCACGAGGTGGCCAGACG...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGATGGTCTTGACGCCATaGAAGCGTCTGGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMMVLTP*KRLATS
Trigger: CGAGGTGGCCAGACGCTTCCATGGCGTCAAGACCAT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCCCTCCCAGGCCCTCTaGAGCCCGAGGTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLPSQAL*SPRSAL
Trigger: AAGGGCTGACCTCGGGCTCCAGAGGGCCTGGGAGGG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGTTGTTGTCTTTCGTATaGAACACTACAAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRLLSFV*NTTSWS
Trigger: GGACCAACTTGTAGTGTTCCATACGAAAGACAACAA...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGCCATCCAGTTGCCTCTaGGGTGAGATTGGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: GQDASGILCCKLHTVQFLPSSCL*GEIGLD
Trigger: GTCCAGACCAATCTCACCCCAGAGGCAACTGGATGG...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTGTGCTGCTTGTCAATaGTGTCACGGCCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMCAACQ*CHGLWP
Trigger: TGGCCACAGGCCGTGACATCATTGACAAGCAGCACA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCCAGGCCACATATTCTTaGGCACAGGATTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCQATYS*AQDLNC
Trigger: ACAGTTCAAATCCTGTGCTCAAGAATATGTGGCCTG...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAATGCTCTCCATCTATTaGAAATCGTCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQMLSIY*KSSAGP
Trigger: AGGCCCTGCAGACGATTTTCAATAGATGGAGAGCAT...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAATTTACCTTACGGACGTaGCAGGAAAAGAGGACATTC +
Preference number: 4 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQFTLRT*QEKRTF
Trigger: GAATGTCCTCTTTTCCTGTCACGTCCGTAAGGTAAA...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAAAGGACAGAGGAAGATaGTACCAAAGGCAGAAAACC +
Preference number: 4 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQKDRGR*YQRQKT
Trigger: GGTTTTCTGCCTTTGGTATCATCTTCCTCTGTCCTT...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGGTCTCAGAAGGCCCCTaGAGCATACGTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GQDASGILCCKLHTVQFLVSEGP*SIRAFA
Trigger: AGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGAC...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CTAACAGACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAAATTCCAGGCTCTCCTaGTCCGCCATGGCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LTDRYKPVSPRGSSHKVKNSRLS*SAMAPA
Trigger: CGCTGGCGCCATGGCGGAGCAGGAGAGCCTGGAATT...TTTCACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTCTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR GCA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTCACTCTTTCAACCTCTaGTCTCTGACTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIHSFNL*SLTGVG
Trigger: ACCAACCCCAGTCAGAGAGCAGAGGTTGAAAGAGTG...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAAAGGCGCTCATATATTaGCTTGGCAAAGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQKALIY*LGKGVS
Trigger: AGAGACGCCTTTGCCAAGGCAATATATGAGCGCCTT...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAATCCCTTTGTGCTGTTaGTCCACGAGGTCAACAATG +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQIPLCC*STRSTM
Trigger: CATTGTTGACCTCGTGGAGCAACAGCACAAAGGGAT...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATAATAGACTACATCGCCTaGATAATGTCGAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIIDYIA*IMSNSK
Trigger: TTTCGAATTCGACATTATGCAGGCGATGTAGTCTAT...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCCTATTGAAAATCGTCTaGAGGGCCTCCTCAAAACGG +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSLLKIV*RASSKR
Trigger: CCGTTTTGAGGAGGCCCTGCAGACGATTTTCAATAG...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGTGTTTCTGCTTCTCTTaGCAAAAATCATGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRCFCFS*QKSWFP
Trigger: TGGAAACCATGATTTTTGCCAAGAGAAGCAGAAACA...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTCTGACTGGGGTTGGTaGTGGCCGCAATATACTGCA +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMSDWGW*WPQYTA
Trigger: TGCAGTATATTGCGGCCATCACCAACCCCAGTCAGA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGATCATCTTATACCTGTaGAGAAACTTCTCGTATGTC +
Preference number: 4 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKAIILYL*RNFSYV
Trigger: GACATACGAGAAGTTTCTTCACAGGTATAAGATGAT...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGGACAGCCTCTTTGTCTaGAGGAAGGTCATGGTTGGG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMDSLFV*RKVMVG
Trigger: CCCAACCATGACCTTCCTTCAGACAAAGAGGCTGTC...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCTCACGGCCTTTATACTaGTCAATTGTGTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTSRPLY*SIVSLP
Trigger: TGGAAGAGACACAATTGAGCAGTATAAAGGCCGTGA...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTTTACTGGTTCTAACTCAGTGGCAAAGGCGTCTCTaGCGTAGCTGGCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SPRGSSHKVKTGLLVLTQWQRRL*RSWPLV
Trigger: AACAAGAGGCCAGCTACGGCAGAGACGCCTTTGCCA...CTGAGTTAGAACCAGTAAACCTGTTTTCACTTTATGGCTGCTACCACGTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR GCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCCTTTGCCGACATTCATaGAAGCATCATCAAGGATTG +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTLCRHS*KHHQGL
Trigger: CAATCCTTGATGATGCTTGCATGAATGTCGGCAAAG...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCAGATATTCTACTTGGTaGCGGCAGCGTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSRYSTW*RQRSSS
Trigger: TGATGATGAACGCTGCCGGCACCAAGTAGAATATCT...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGCAACATTTCCACGGCTaGAACCTTTGCCCTGACCTG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMQHFHG*NLCPDL
Trigger: CAGGTCAGGGCAAAGGTTGCAGCCGTGGAAATGTTG...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAACAACAGGGACAAAAGTaGCTGAGGTCTGAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQQQGQK*LRSEVY
Trigger: ATACACCTCAGACCTCAGGCACTTTTGTCCCTGTTG...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAAAAGCTTCTTTCTCCTaGCTGTTGCACAATCACTCG +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQKASFS*LLHNHS
Trigger: CGAGTGATTGTGCAACAGCCAGGAGAAAGAAGCTTT...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAACCAAGATATTCTACTTaGTGCCGGCAGCGTTCATCA +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQPRYST*CRQRSS
Trigger: TGATGAACGCTGCCGGCACCAAGTAGAATATCTTGG...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGAACTTCTCGTATGTCTaGCGGAAGGCAAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: GQDASGILCCKLHTVQFLNFSYV*RKANPA
Trigger: GGCAGGATTTGCCTTCCGCCAGACATACGAGAAGTT...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTACCTTTGCCCTGACCTaGGGCAGGTCTGAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLTFALT*GRSEAG
Trigger: TCCGGCCTCAGACCTGCCCCAGGTCAGGGCAAAGGT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAGTTGGTCCTTTCCATTaGAGACACTCAGACCAGTCA +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQVGPFH*RHSDQS
Trigger: TGACTGGTCTGAGTGTCTCCAATGGAAAGGACCAAC...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
3UTR CAA 72 bp AAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTaGTTGCAAACTGCACACAGTGCAATTTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: KGFPRTGCQRDS*LQTAHSAIFGK
Trigger: CTTCCCAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp AAAGTGAAAACAGGTTTACTGGTTCTAACTCAGGATGTTCTGGGCATCAACAAGTCAACCTCTGCTCTCTaGCTGGGGTTGGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: KVKTGLLVLTQDVLGINKSTSAL*LGLVMA
Trigger: GGCCATCACCAACCCCAGTCAGAGAGCAGAGGTTGA...CTTGTTGATGCCCAGAACATCCTGAGTTAGAACCAGTAAACCTGTTTTCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR TCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGATGCTCTCCATCTATTaGAAATCGTCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GQDASGILCCKLHTVQFLMLSIY*KSSAGP
Trigger: AGGCCCTGCAGACGATTTTCAATAGATGGAGAGCAT...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTCTCACTCTTGAAATaGTTCACCAGCACTCCAACA +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQFSLLK*FTSTPT
Trigger: TGTTGGAGTGCTGGTGAATCATTTCAAGAGTGAGAA...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTTTACTGGTTCTAACTCAGCATCAGCACGAAGTCTaGCTTGCCGAATTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SPRGSSHKVKTGLLVLTQHQHEV*LAEFQA
Trigger: AGCCTGGAATTCGGCAAGGCAGACTTCGTGCTGATG...CTGAGTTAGAACCAGTAAACCTGTTTTCACTTTATGGCTGCTACCACGTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR GCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGGCAATGATCCCTTTGTaGTGTTGCTCCACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMAMIPL*CCSTRS
Trigger: TGACCTCGTGGAGCAACAGCACAAAGGGATCATTGC...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAAGATATTCTACTTGGTaGCGGCAGCGTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQRYSTW*RQRSSS
Trigger: TGATGATGAACGCTGCCGGCACCAAGTAGAATATCT...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCGTCAGTGACAAAAATTaGTCTGTCTTCCACCTTACT +
Preference number: 4 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTVSDKN*SVFHLT
Trigger: AGTAAGGTGGAAGACAGAGCAATTTTTGTCACTGAC...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp AACCTAACAGACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGCGTCTCTGCCGTAGCTaGCCTCTTGTTCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: NLTDRYKPVSPRGSSHKVRLCRS*PLVLCA
Trigger: AGCACACAGAACAAGAGGCCAGCTACGGCAGAGACG...CACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTCTGTTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGCCAATTCGACTCTCATaGGTTGGCTGTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GQDASGILCCKLHTVQFLPIRLS*VGCLLK
Trigger: CTTCAGCAAACAGCCAACCCATGAGAGTCGAATTGG...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTTTACTGGTTCTACGACGACTTCTCCAATaGACGTATAGATGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: PVSPRGSSHKVKTGLLVLRRLLQ*TYRCAL
Trigger: AAGGGCGCATCTATACGTTCATTGGAGAAGTCGTCG...TAGAACCAGTAAACCTGTTTTCACTTTATGGCTGCTACCACGTGGACTTACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTTCAACCTCTGCTCTCTaGCTGGGGTTGGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLSTSAL*LGLVMA
Trigger: GGCCATCACCAACCCCAGTCAGAGAGCAGAGGTTGA...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp AAAGTGAAAACAGGTTTACTGGTTCTAACTCAGGATGTTCTGGGCATCAACAAGTGTGCTGCTTGTCAATaGTGTCACGGCCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KVKTGLLVLTQDVLGINKCAACQ*CHGLWP
Trigger: TGGCCACAGGCCGTGACATCATTGACAAGCAGCACA...CTTGTTGATGCCCAGAACATCCTGAGTTAGAACCAGTAAACCTGTTTTCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR TCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAGTTCAATTAGTTTCTTaGCAGCCTCTTTGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQVQLVS*QPLCLK
Trigger: CTTCAGACAAAGAGGCTGTCAAGAAACTAATTGAAC...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTAGTCTCGCATGGTCTTaGCGCCATGGAAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLSLAWS*RHGSVW
Trigger: CCAGACGCTTCCATGGCGTCAAGACCATGCGAGACT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGATGCTCTCCATCTATTaGAAATCGTCTGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMMLSIY*KSSAGP
Trigger: AGGCCCTGCAGACGATTTTCAATAGATGGAGAGCAT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGAGGTGTATCTGGCTTTaGAGCAAGATAGTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMRCIWL*SKIVAL
Trigger: GAGGGCAACTATCTTGCTTCAAAGCCAGATACACCT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGAAAGTGCCTGAGGTCTaGGGTGTATCTGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMKVPEV*GVSGFE
Trigger: TTCAAAGCCAGATACACCTCAGACCTCAGGCACTTT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGCTATTGAAAATCGTCTaGAGGGCCTCCTCAAAACGG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMLLKIV*RASSKR
Trigger: CCGTTTTGAGGAGGCCCTGCAGACGATTTTCAATAG...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAGTCAGTGACAAAAATTaGTCTGTCTTCCACCTTACT +
Preference number: 4 (lower is better)
Translates to: SQGQDASGILCCKLHTVQVSDKN*SVFHLT
Trigger: AGTAAGGTGGAAGACAGAGCAATTTTTGTCACTGAC...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGCCAAGATATTCTACTTaGTGCCGGCAGCGTTCATCA +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMPRYST*CRQRSS
Trigger: TGATGAACGCTGCCGGCACCAAGTAGAATATCTTGG...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTCTGAAGGAAGGTCATaGTTGGGCCAGGTGAATTCA +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMSEGRS*LGQVNS
Trigger: TGAATTCACCTGGCCCAACCATGACCTTCCTTCAGA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTTGTCAGAGCTGCCTTaGTTCTTTTGTACCGCATGC +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMLSELP*FFCTAC
Trigger: GCATGCGGTACAAAAGAACCAAGGCAGCTCTGACAA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCTTGTTGTCTTTCGTATaGAACACTACAAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSLLSFV*NTTSWS
Trigger: GGACCAACTTGTAGTGTTCCATACGAAAGACAACAA...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGCCAATTCGACTCTCATaGGTTGGCTGTTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMPIRLS*VGCLLK
Trigger: CTTCAGCAAACAGCCAACCCATGAGAGTCGAATTGG...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp CTAAACCTAACAGACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAATCTGACTGGGGTTGGTaGTGGCCGCAATATACTGCA +
Preference number: 4 (lower is better)
Translates to: LNLTDRYKPVSPRGSSHKSDWGW*WPQYTA
Trigger: TGCAGTATATTGCGGCCATCACCAACCCCAGTCAGA...TTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTCTGTTAGGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR TCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGTTTTCCAAACCTGCTTaGGTTGTCATTACGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GQDASGILCCKLHTVQFLFSKPA*VVITVG
Trigger: ACCAACCGTAATGACAACTCAAGCAGGTTTGGAAAA...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGCATCAAGGATTGCAATaGTCCCTTTGTGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMHQGLQ*SLCAVA
Trigger: AGCAACAGCACAAAGGGATCATTGCAATCCTTGATG...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGGAAACATTTCATCGGTaGCTTTGCCGACATTCATGC +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMETFHR*LCRHSC
Trigger: GCATGAATGTCGGCAAAGTCACCGATGAAATGTTTC...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGCAGGCCACATATTCTTaGGCACAGGATTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMQATYS*AQDLNC
Trigger: ACAGTTCAAATCCTGTGCTCAAGAATATGTGGCCTG...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCCGAGGTCAGCCCTTTaGCCCTTCAACATTTCCACG +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLPRSAL*PFNIST
Trigger: CGTGGAAATGTTGAAGGGTCAAAGGGCTGACCTCGG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTTTACCTTACGGACGTaGCAGGAAAAGAGGACATTC +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMFTLRT*QEKRTF
Trigger: GAATGTCCTCTTTTCCTGTCACGTCCGTAAGGTAAA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGCACGAAGTCTGCCTTaGCGAATTCCAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLARSLP*RIPGSP
Trigger: AGGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp GACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTCACTCTTTCAACCTCTaGTCTCTGACTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: DRYKPVSPRGSSHKVKTGHSFNL*SLTGVG
Trigger: ACCAACCCCAGTCAGAGAGCAGAGGTTGAAAGAGTG...ACCTGTTTTCACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR GCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTCTTGTTCTGTGTGCTaGTTGTCAATGATGTCACGG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMSCSVC*LSMMSR
Trigger: CCGTGACATCATTGACAAGCAGCACACAGAACAAGA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTTGGCAAAGGCGTCTCTaGCGTAGCTGGCCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLWQRRL*RSWPLV
Trigger: AACAAGAGGCCAGCTACGGCAGAGACGCCTTTGCCA...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGAGATATTCTACTTGGTaGCGGCAGCGTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMRYSTW*RQRSSS
Trigger: TGATGATGAACGCTGCCGGCACCAAGTAGAATATCT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGCGGAAGGCAAATCCTaGCCGACGCACTCTCACATT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLAEGKS*PTHSHI
Trigger: AATGTGAGAGTGCGTCGGGCAGGATTTGCCTTCCGC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCTTCTTTGTTGCAAACTaGACACAGTGCAATTTTTGG +
Preference number: 4 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSFFVAN*TQCNFW
Trigger: CCAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAA...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGCTCTTCATCTCAGTTTaGCATGTAATCTTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMLFISV*HVILGL
Trigger: CAGGCCCAAGATTACATGGCAAACTGAGATGAAGAG...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp AGAGCAATCATAGAATTCTTAAACAAGGTAGCAGCAGTCAGAGGTCGCTTGGTCGGAGGTCAAGTGACTTaGCTAAGGTTCACTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RAIIEFLNKVAAVRGRLVGGQVT*LRFTQC
Trigger: ACACTGAGTGAACCTTAGGCAAGTCACTTGACCTCC...GACCAAGCGACCTCTGACTGCTGCTACCTTGTTTAAGAATTCTATGATTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCGTCTCTGCCGTAGCTaGCCTCTTGTTCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLRLCRS*PLVLCA
Trigger: AGCACACAGAACAAGAGGCCAGCTACGGCAGAGACG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTTTTCCAAACCTGCTTaGGTTGTCATTACGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMFSKPA*VVITVG
Trigger: ACCAACCGTAATGACAACTCAAGCAGGTTTGGAAAA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGCTTGAGCACAGGATTTaGACTGTTATACATAAGGCG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMLEHRI*TVIHKA
Trigger: CGCCTTATGTATAACAGTTCAAATCCTGTGCTCAAG...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp CTTGGTCACCTCTGTAATGCTCAGTTTGCCTTCAGGCCACATATTCTTGAGCACTCTTGTCATTGGGTTTaGTGCAACGAACGTAATATG +
Preference number: 4 (lower is better)
Translates to: LGHLCNAQFAFRPHILEHSCHWV*CNERNM
Trigger: CATATTACGTTCGTTGCATCAAACCCAATGACAAGA...GTGCTCAAGAATATGTGGCCTGAAGGCAAACTGAGCATTACAGAGGTGACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTAGCGCCGGTAGTACCTaGTTATTGTCAGAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLSAGST*LLSELP
Trigger: AGGCAGCTCTGACAATAATCAGGTACTACCGGCGCT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTAGGGACAAAAGTGCCTaGGGTCTGAGGTGTATCTGG +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLRDKSA*GLRCIW
Trigger: CCAGATACACCTCAGACCTCAGGCACTTTTGTCCCT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCATCAGCACGAAGTCTaGCTTGCCGAATTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLHQHEV*LAEFQA
Trigger: AGCCTGGAATTCGGCAAGGCAGACTTCGTGCTGATG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp GGTTTACTGGTTCTAACTCAGGATGTTCTGGGCATCAACAAGGCAGTCTATCAAGCCTCTTGTTCTGTGTaGTGCTTGTCAATGATGTCA +
Preference number: 4 (lower is better)
Translates to: GLLVLTQDVLGINKAVYQASCSV*CLSMMS
Trigger: TGACATCATTGACAAGCAGCACACAGAACAAGAGGC...TTGATAGACTGCCTTGTTGATGCCCAGAACATCCTGAGTTAGAACCAGTAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR GCA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAATAGACTACATCGCCTaGATAATGTCGAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQIDYIA*IMSNSK
Trigger: TTTCGAATTCGACATTATGCAGGCGATGTAGTCTAT...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTTTGAAGCAAGATAGTTaGCCTCCCAGGCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLLKQDS*PPRPSG
Trigger: TCCAGAGGGCCTGGGAGGGCAACTATCTTGCTTCAA...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp CTAACAGACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAGCTCATATATTGCCTTaGCAAAGGCGTCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LTDRYKPVSPRGSSHKVKAHILP*QRRLCR
Trigger: ACGGCAGAGACGCCTTTGCCAAGGCAATATATGAGC...TTTCACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTCTGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCGTCTGGCCACCTCGTaGATGTACGACTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLRLATS*MYDFTL
Trigger: CAAAGTGAAGTCGTACATCCACGAGGTGGCCAGACG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTAACTTTAGGAGGGCTTaGCCACTTCACGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLNFRRA*PLHVLP
Trigger: GGGAAGCACGTGAAGTGGCCAAGCCCTCCTAAAGTT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAGTTGCCACATACTGTaGCTTTTAGTACATCATAAA +
Preference number: 4 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSASCHIL*LLVHHK
Trigger: TTTATGATGTACTAAAAGCCACAGTATGTGGCAACT...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCGACGACTTCTCCAATaGACGTATAGATGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLRRLLQ*TYRCAL
Trigger: AAGGGCGCATCTATACGTTCATTGGAGAAGTCGTCG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp GAAAACAGGTTTACTGGTTCTAACTCAGGATGTTCTGGGCATCAACAAGGCAGTTTTTCCAAACCTGCTTaGGTTGTCATTACGGTTGGT +
Preference number: 4 (lower is better)
Translates to: ENRFTGSNSGCSGHQQGSFSKPA*VVITVG
Trigger: ACCAACCGTAATGACAACTCAAGCAGGTTTGGAAAA...ACTGCCTTGTTGATGCCCAGAACATCCTGAGTTAGAACCAGTAAACCTGTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR TCA 90 bp TCTACTAGAGCAATCATAGAATTCTTAAACAAGGTAGCAGCAGTCAGAGGTCGCCAGGCCACATATTCTTaGGCACAGGATTTGAACTGT +
Preference number: 4 (lower is better)
Translates to: STRAIIEFLNKVAAVRGRQATYS*AQDLNC
Trigger: ACAGTTCAAATCCTGTGCTCAAGAATATGTGGCCTG...GCGACCTCTGACTGCTGCTACCTTGTTTAAGAATTCTATGATTGCTCTAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTCTTGTCATTGGGTTTaGTGCAACGAACGTAATATG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMSCHWV*CNERNM
Trigger: CATATTACGTTCGTTGCATCAAACCCAATGACAAGA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTAGAGGACAATCCTTATaGGCATCTGGGCACGGAGTT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLRGQSL*ASGHGV
Trigger: AACTCCGTGCCCAGATGCTCATAAGGATTGTCCTCT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp CCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTTTACTGGTTCTATCACGGCCTTTATACTaGTCAATTGTGTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PVSPRGSSHKVKTGLLVLSRPLY*SIVSLP
Trigger: TGGAAGAGACACAATTGAGCAGTATAAAGGCCGTGA...TAGAACCAGTAAACCTGTTTTCACTTTATGGCTGCTACCACGTGGACTTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCACTCTTTCAACCTCTaGTCTCTGACTGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLHSFNL*SLTGVG
Trigger: ACCAACCCCAGTCAGAGAGCAGAGGTTGAAAGAGTG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGGTCAGTGACAAAAATTaGTCTGTCTTCCACCTTACT +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMVSDKN*SVFHLT
Trigger: AGTAAGGTGGAAGACAGAGCAATTTTTGTCACTGAC...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGCTCATATATTGCCTTaGCAAAGGCGTCTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLAHILP*QRRLCR
Trigger: ACGGCAGAGACGCCTTTGCCAAGGCAATATATGAGC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCACAGAGCTTTCGGCTaGAAAAATGGGCGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLHRAFG*KNGRVC
Trigger: GCAAACACGCCCATTTTTCCAGCCGAAAGCTCTGTG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTAACTTCTCGTATGTCTaGCGGAAGGCAAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLNFSYV*RKANPA
Trigger: GGCAGGATTTGCCTTCCGCCAGACATACGAGAAGTT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTTCGACTCTCATGGGTTaGCTGTTTGCTGAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLSTLMG*LFAEEA
Trigger: TGCCTCTTCAGCAAACAGCCAACCCATGAGAGTCGA...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp TCTACTAGAGCAATCATAGAATTCTTAAACAAGGTAGCAGCAGTCAGAGGTCGCCTTGAGCACAGGATTTaGACTGTTATACATAAGGCG +
Preference number: 4 (lower is better)
Translates to: STRAIIEFLNKVAAVRGRLEHRI*TVIHKA
Trigger: CGCCTTATGTATAACAGTTCAAATCCTGTGCTCAAG...GCGACCTCTGACTGCTGCTACCTTGTTTAAGAATTCTATGATTGCTCTAGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR TCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTCCATTTTATACAGGTaGCGGTCAGTGACAAAAATT +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMSILYR*RSVTKI
Trigger: AATTTTTGTCACTGACCGTCACCTGTATAAAATGGA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGTTTAAATTTCCCAAGTaGAGAATAGCAGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: GQDASGILCCKLHTVQFLFKFPK*RIAAKI
Trigger: GATTTTGGCTGCTATTCTGCACTTGGGAAATTTAAA...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTAAGGCGCTCATATATTaGCTTGGCAAAGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLKALIY*LGKGVS
Trigger: AGAGACGCCTTTGCCAAGGCAATATATGAGCGCCTT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp GTAGAAGAGGAGAAAAAGGAGGAAAAAGGGAAGAAGAAACTAGATTCTGAAGCAAAGGCGCTCATATATTaGCTTGGCAAAGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: VEEEKKEEKGKKKLDSEAKALIY*LGKGVS
Trigger: AGAGACGCCTTTGCCAAGGCAATATATGAGCGCCTT...TGCTTCAGAATCTAGTTTCTTCTTCCCTTTTTCCTCCTTTTTCTCCTCTTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTATCCCTTTGTGCTGTTaGTCCACGAGGTCAACAATG +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLIPLCC*STRSTM
Trigger: CATTGTTGACCTCGTGGAGCAACAGCACAAAGGGAT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGATAGACTACATCGCCTaGATAATGTCGAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMIDYIA*IMSNSK
Trigger: TTTCGAATTCGACATTATGCAGGCGATGTAGTCTAT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCAACAGGGACAAAAGTaGCTGAGGTCTGAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLQQGQK*LRSEVY
Trigger: ATACACCTCAGACCTCAGGCACTTTTGTCCCTGTTG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGATCATCAAATATCTGTaGAGATTTCTTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: GQDASGILCCKLHTVQFLIIKYL*RFLVIG
Trigger: CCCAATGACAAGAAATCTCCACAGATATTTGATGAT...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CCA 90 bp GTCACCTCTGTAATGCTCAGTTTGCCTTCAGGCCACATATTCTTGAGCACAGGAATCATCAAATATCTGTaGAGATTTCTTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: VTSVMLSLPSGHIFLSTGIIKYL*RFLVIG
Trigger: CCCAATGACAAGAAATCTCCACAGATATTTGATGAT...TCCTGTGCTCAAGAATATGTGGCCTGAAGGCAAACTGAGCATTACAGAGGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTATCCTTATGAGCATCTaGGCACGGAGTTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLILMSI*ARSSSK
Trigger: CTTGGAAGAACTCCGTGCCCAGATGCTCATAAGGAT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGTTGGTCCTTTCCATTaGAGACACTCAGACCAGTCA +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLVGPFH*RHSDQS
Trigger: TGACTGGTCTGAGTGTCTCCAATGGAAAGGACCAAC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp GACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTAATACAAGTGTCTTTTaGTCGCCTCTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: DRYKPVSPRGSSHKVKTGNTSVF*SPLHSL
Trigger: AAGGCTATGAAGAGGCGATCAAAAGACACTTGTATT...ACCTGTTTTCACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTACAGGTGACGGTCAGTaGCAAAAATTGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLTGDGQ*QKLLCL
Trigger: AAGACAGAGCAATTTTTGTCACTGACCGTCACCTGT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGCAGATGGTTTCTCTTaGAATGATTCACCAGCACTC +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLADGFS*NDSPAL
Trigger: GAGTGCTGGTGAATCATTTCAAGAGAAACCATCTGC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp GGTTTACTGGTTCTAACTCAGGATGTTCTGGGCATCAACAAGGCAGTCTATCAAGAAGAAACTAGATTCTaGAGCAAAGTTCAGCCAATT +
Preference number: 4 (lower is better)
Translates to: GLLVLTQDVLGINKAVYQEETRF*SKVQPI
Trigger: AATTGGCTGAACTTTGCTTCAGAATCTAGTTTCTTC...TTGATAGACTGCCTTGTTGATGCCCAGAACATCCTGAGTTAGAACCAGTAAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR GCA 90 bp AGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTTTATCTTGTTCTGTGTGCTaGTTGTCAATGATGTCACGG +
Preference number: 4 (lower is better)
Translates to: RYKPVSPRGSSHKVKTGLSCSVC*LSMMSR
Trigger: CCGTGACATCATTGACAAGCAGCACACAGAACAAGA...TAAACCTGTTTTCACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGCCTCTTGTTCTGTGTaGTGCTTGTCAATGATGTCA +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLASCSV*CLSMMS
Trigger: TGACATCATTGACAAGCAGCACACAGAACAAGAGGC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp AGAGCAATCATAGAATTCTTAAACAAGGTAGCAGCAGTCAGAGGTCGCTTGGTCAGAAACTACATCGCCTaGATAATGTCGAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: RAIIEFLNKVAAVRGRLVRNYIA*IMSNSK
Trigger: TTTCGAATTCGACATTATGCAGGCGATGTAGTTTCT...GACCAAGCGACCTCTGACTGCTGCTACCTTGTTTAAGAATTCTATGATTGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR CCA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGATCATCAAATATCTGTaGAGATTTCTTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: SASILFISVCHVILGLFMIIKYL*RFLVIG
Trigger: CCCAATGACAAGAAATCTCCACAGATATTTGATGAT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTTTCGGGGTGTTCGAATaGAAATTTTGGTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLFGVFE*KFWSSH
Trigger: ATGGGAAGACCAAAATTTTCATTCGAACACCCCGAA...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTTCACGGCCTTTATACTaGTCAATTGTGTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLSRPLY*SIVSLP
Trigger: TGGAAGAGACACAATTGAGCAGTATAAAGGCCGTGA...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp CCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTTTACTGGTTCTATTTAAATTTCCCAAGTaGAGAATAGCAGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: PVSPRGSSHKVKTGLLVLFKFPK*RIAAKI
Trigger: GATTTTGGCTGCTATTCTGCACTTGGGAAATTTAAA...TAGAACCAGTAAACCTGTTTTCACTTTATGGCTGCTACCACGTGGACTTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCTTTGCCGACATTCATaGAAGCATCATCAAGGATTG +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLLCRHS*KHHQGL
Trigger: CAATCCTTGATGATGCTTGCATGAATGTCGGCAAAG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTAATACAAGTGTCTTTTaGTCGCCTCTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLNTSVF*SPLHSL
Trigger: AAGGCTATGAAGAGGCGATCAAAAGACACTTGTATT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGTTCAATTAGTTTCTTaGCAGCCTCTTTGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLVQLVS*QPLCLK
Trigger: CTTCAGACAAAGAGGCTGTCAAGAAACTAATTGAAC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCTTGATGAGCTGGGATaGTCTCCATCTATTGAAAAT +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLLDELG*SPSIEN
Trigger: ATTTTCAATAGATGGAGAGCATCCCAGCTCATCAAG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp CTAACAGACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAATCTTATACACTGTTTaGATCTCCTCAGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LTDRYKPVSPRGSSHKVKILYTV*ISSGLK
Trigger: CTTCAAACCTGAGGAGATCCAAACAGTGTATAAGAT...TTTCACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTCTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTTTGTTGTCTTTCGTATaGAACACTACAAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLLLSFV*NTTSWS
Trigger: GGACCAACTTGTAGTGTTCCATACGAAAGACAACAA...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR TCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTATCATCTTATACCTGTaGAGAAACTTCTCGTATGTC +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLIILYL*RNFSYV
Trigger: GACATACGAGAAGTTTCTTCACAGGTATAAGATGAT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTATCTTATACACTGTTTaGATCTCCTCAGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLILYTV*ISSGLK
Trigger: CTTCAAACCTGAGGAGATCCAAACAGTGTATAAGAT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR GCA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTTTTAAATTTCCCAAGTaGAGAATAGCAGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLFKFPK*RIAAKI
Trigger: GATTTTGGCTGCTATTCTGCACTTGGGAAATTTAAA...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS CCA 90 bp TGGGTTGGGAGGCAGCAGCTGGACTGGGACCCAGGACTCGGAGTGTaGCCGGGCTCCGGGCCAGGCCTCCGCGGGGCGTCAGTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: WVGRQQLDWDPGLGV*PGSGPGLRGASVPG
Trigger: CCCGGGAACTGACGCCCCGCGGAGGCCTGGCCCGGAGCCCGGCCACACTCCGAGTCCTGGGTCCCAGTCCAGCTGCTGCCTCCCAACCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577576.1
CDS-3UTR CAA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGCGGCTGGGAGTTGGGTaGGGGTGGGTCCGCCGAACT +
Preference number: 5 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGRLGVG*GWVRRT
Trigger: AGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCACTCCACCTGAGGCGTaGGCTCCCTCCCCCTCATCC +
Preference number: 5 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRTPPEA*APSPSS
Trigger: GGATGAGGGGGAGGGAGCCAACGCCTCAGGTGGAGT...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGGCCTCTGGGGTGAGATaGGTCTGGACGTCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGASGVR*VWTSAQ
Trigger: CTGGGCTGACGTCCAGACCAATCTCACCCCAGAGGC...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGCAGGGCTGGCTCACCTaGGGCAAGAGAGGTGGCTAT +
Preference number: 5 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVQGWLT*GKRGGY
Trigger: ATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTG...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTCGGCTGGGAGTTGGGTaGGGGTGGGTCCGCCGAACT +
Preference number: 5 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSRLGVG*GWVRRT
Trigger: AGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGAAGCCCGAGCGATTCTaGGTGAAGTCGGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: ATLSSPERWSEALVGALVKPERF*VKSGWG
Trigger: GCCCCAGCCCGACTTCACCAAGAATCGCTCGGGCTT...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGCTCACCCAGTGGCTTaGGCTGGCGGCTGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSAHPVA*AGGWEL
Trigger: CAACTCCCAGCCGCCAGCCAAAGCCACTGGGTGAGC...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS GCA 90 bp CGCTTCTCACCTCTCGTGTTCAGACAATCGGGGCATGCTCCTCCGTaGAGGGCTCTCCTGACTCCCGCTCAGCAGGGTGGCCCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RFSPLVFRQSGHAPP*RALLTPAQQGGPCL
Trigger: GAGGCAGGGGCCACCCTGCTGAGCGGGAGTCAGGAGAGCCCTGCACGGAGGAGCATGCCCCGATTGTCTGAACACGAGAGGTGAGAAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577576.1
CDS-3UTR CAA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGCCGTCATCCCGTGTCTaGACCCCGCCCTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: ATLSSPERWSEALVGALVPSSRV*TPPLLF
Trigger: AAACAGCAAGGGCGGGGTCAAGACACGGGATGACGG...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGGCCGTAGCTGGCCTCTaGTTCTGTGTGCTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLAVAGL*FCVLLV
Trigger: GACAAGCAGCACACAGAACAAGAGGCCAGCTACGGC...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCCGCTCATATATTGCCTaGGCAAAGGCGTCTCTGCCG +
Preference number: 5 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRRSYIA*AKASLP
Trigger: CGGCAGAGACGCCTTTGCCAAGGCAATATATGAGCG...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCTCCAGGTGCTCTGACTaGACCTGGCCACGGGGCATC +
Preference number: 5 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTSRCSD*TWPRGI
Trigger: GATGCCCCGTGGCCAGGTCAAGTCAGAGCACCTGGA...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGCACCGCATGGGGCATTaGCTCCCAGCCTCTACTTCC +
Preference number: 5 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVHRMGH*LPASTS
Trigger: GGAAGTAGAGGCTGGGAGCAAATGCCCCATGCGGTG...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS GCA 90 bp GGCCATGAACTCGGGCATGGAGACGGTGTCCATCAGCACGAAGTCTaGCTTGCCGAATTCCAGGCTCTCCTGCTCCGCCATGGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GHELGHGDGVHQHEV*LAEFQALLLRHGAS
Trigger: GCTGGCGCCATGGCGGAGCAGGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCTGATGGACACCGTCTCCATGCCCGAGTTCATGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000579584.5
ENST00000583621.1
CDS CCA 90 bp CTGAGGATGAAGCCCGAGCGATTCTTGGTGAAGTCGGGCTGGGGCTaGTTGAGCCGCGTCTCCACGGAGACGGTGCACTTCTTCCCGTGC +
Preference number: 5 (lower is better)
Translates to: LRMKPERFLVKSGWG*LSRVSTETVHFFPC
Trigger: GCACGGGAAGAAGTGCACCGTCTCCGTGGAGACGCGGCTCAACCAGCCCCAGCCCGACTTCACCAAGAATCGCTCGGGCTTCATCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000577576.1
CDS CCA 90 bp GGCACGCTGAGGATGAAGCCCGAGCGATTCTTGGTGAAGTCGGGCTaGGGCTGGTTGAGCCGCGTCTCCACGGAGACGGTGCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: GTLRMKPERFLVKSG*GWLSRVSTETVHFF
Trigger: GAAGAAGTGCACCGTCTCCGTGGAGACGCGGCTCAACCAGCCCCAGCCCGACTTCACCAAGAATCGCTCGGGCTTCATCCTCAGCGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000577576.1
CDS-3UTR CAA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGATTGCAATGATCCCTTaGTGCTGTTGCTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVIAMIP*CCCSTR
Trigger: CCTCGTGGAGCAACAGCACAAAGGGATCATTGCAAT...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCGCTGCCTTGGTTCTTTaGTACCGCATGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASAALVL*YRMRAR
Trigger: CCTGGCCCGCATGCGGTACAAAAGAACCAAGGCAGC...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTGCTCACCCAGTGGCTTaGGCTGGCGGCTGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPAHPVA*AGGWEL
Trigger: CAACTCCCAGCCGCCAGCCAAAGCCACTGGGTGAGC...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCACCGCATGGGGCATTaGCTCCCAGCCTCTACTTCC +
Preference number: 5 (lower is better)
Translates to: HLGQERWLWGSRRVGSCIHRMGH*LPASTS
Trigger: GGAAGTAGAGGCTGGGAGCAAATGCCCCATGCGGTG...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCATGAGACCGGGTTGTaGGGACCACTCTGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: HLGQERWLWGSRRVGSCIHETGL*GPLWGQ
Trigger: CTGACCCCAGAGTGGTCCCAACAACCCGGTCTCATG...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGCCTGCCCTCCAGCCTTaGACAGGCAACTCATTTGGC +
Preference number: 5 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVPALQP*TGNSFG
Trigger: GCCAAATGAGTTGCCTGTCAAAGGCTGGAGGGCAGG...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS GCA 90 bp TTGAAGGTGGCGCTTCTCACCTCTCGTGTTCAGACAATCGGGGCATaGTCCTCCGTGCAGGGCTCTCCTGACTCCCGCTCAGCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: LKVALLTSRVQTIGA*SSVQGSPDSRSAGW
Trigger: CCACCCTGCTGAGCGGGAGTCAGGAGAGCCCTGCACGGAGGAGCATGCCCCGATTGTCTGAACACGAGAGGTGAGAAGCGCCACCTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577576.1
CDS-3UTR CAA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCGCCGTAGCTGGCCTCTaGTTCTGTGTGCTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: HLGQERWLWGSRRVGSCIAVAGL*FCVLLV
Trigger: GACAAGCAGCACACAGAACAAGAGGCCAGCTACGGC...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTAAGCCCGAGCGATTCTaGGTGAAGTCGGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPKPERF*VKSGWG
Trigger: GCCCCAGCCCGACTTCACCAAGAATCGCTCGGGCTT...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGGAAGCATACGTGCTTTaGCTGGGCAGAAACTGGCAA +
Preference number: 5 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWEAYVL*LGRNWQ
Trigger: TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTC...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTACTCCACCTGAGGCGTaGGCTCCCTCCCCCTCATCC +
Preference number: 5 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTTPPEA*APSPSS
Trigger: GGATGAGGGGGAGGGAGCCAACGCCTCAGGTGGAGT...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGCATGAGACCGGGTTGTaGGGACCACTCTGGGGTCAG +
Preference number: 5 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVHETGL*GPLWGQ
Trigger: CTGACCCCAGAGTGGTCCCAACAACCCGGTCTCATG...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGTGCCAGCGGGATTCTTaGTTGCAAACTGCACACAGT +
Preference number: 5 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWCQRDS*LQTAHS
Trigger: ACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCA...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTCCAAACCTGCTTGAGTaGTCATTACGGTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: PGLACSARTPRCAAAPLPPNLLE*SLRLVL
Trigger: CAAAACCAACCGTAATGACAACTCAAGCAGGTTTGG...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCTCTTTCTCCTGGCTGTaGCACAATCACTCGAGACTT +
Preference number: 5 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRSFSWL*HNHSRL
Trigger: AAGTCTCGAGTGATTGTGCAACAGCCAGGAGAAAGA...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GCCACACTGTCCTCTCCAGAGCGGTGGTCAGAGGCCCTGGTGGGGGCCTTGGTGATTGCAATGATCCCTTaGTGCTGTTGCTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: ATLSSPERWSEALVGALVIAMIP*CCCSTR
Trigger: CCTCGTGGAGCAACAGCACAAAGGGATCATTGCAAT...CACCAAGGCCCCCACCAGGGCCTCTGACCACCGCTCTGGAGAGGACAGTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCTTCTTGACAGCCTCTTaGTCTGAAGGAAGGTCATGG +
Preference number: 5 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRFLTAS*SEGRSW
Trigger: CCATGACCTTCCTTCAGACAAAGAGGCTGTCAAGAA...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAGTTGGTGACGTTCACTaGAAGGTGGCGCTTCTCACT +
Preference number: 5 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAVGDVH*KVALLT
Trigger: AGTGAGAAGCGCCACCTTCAAGTGAACGTCACCAAC...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTTCCAGGTGCTCTGACTaGACCTGGCCACGGGGCATC +
Preference number: 5 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTSRCSD*TWPRGI
Trigger: GATGCCCCGTGGCCAGGTCAAGTCAGAGCACCTGGA...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTGCTGCACACAGGCACTaGGTGGGTTCTGCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTAAHRH*VGSAGS
Trigger: TGACCCGGCAGAACCCACCAAGTGCCTGTGTGCAGC...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGCAGCGGGATTCTTTGTaGCAAACTGCACACAGTGCA +
Preference number: 5 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLQRDSL*QTAHSA
Trigger: TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTG...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGTGGATCTCCTCAGGTTaGAAGCCAATGACTTTCATG +
Preference number: 5 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWWISSG*KPMTFM
Trigger: CATGAAAGTCATTGGCTTCAAACCTGAGGAGATCCA...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGAAAGGCGCTCATATATaGCCTTGGCAAAGGCGTCTC +
Preference number: 5 (lower is better)
Translates to: PGLAHLGQERWLWGSRRVKGAHI*PWQRRL
Trigger: GAGACGCCTTTGCCAAGGCAATATATGAGCGCCTTT...CACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAGATCCCTTTGTGCTGTaGCTCCACGAGGTCAACAAT +
Preference number: 5 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEADPFVL*LHEVNN
Trigger: ATTGTTGACCTCGTGGAGCAACAGCACAAAGGGATC...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGGGCTGGCCCTGTGGGTGACTCTGCTCACCCAGTGGCTTTGGCTGGCGGCTGGTCAGGCCACATATTCTaGAGCACAGGATTTGAACTG +
Preference number: 5 (lower is better)
Translates to: GAGPVGDSAHPVALAGGWSGHIF*STGFEL
Trigger: CAGTTCAAATCCTGTGCTCAAGAATATGTGGCCTGA...CCAGCCGCCAGCCAAAGCCACTGGGTGAGCAGAGTCACCCACAGGGCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTTCCAAGATATTCTACTaGGTGCCGGCAGCGTTCATC +
Preference number: 5 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSSKIFY*VPAAFI
Trigger: GATGAACGCTGCCGGCACCAAGTAGAATATCTTGGA...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCGAAGGAAGGTCATGGTaGGGCCAGGTGAATTCAGAG +
Preference number: 5 (lower is better)
Translates to: HLGQERWLWGSRRVGSCIEGRSW*GQVNSE
Trigger: CTCTGAATTCACCTGGCCCAACCATGACCTTCCTTC...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTATAGTCTTCATCACCTaGTACTGTTTAGTGGGATCC +
Preference number: 5 (lower is better)
Translates to: PGLACSARTPRCAAAPLPIVFIT*YCLVGS
Trigger: GGATCCCACTAAACAGTACAAGGTGATGAAGACTAT...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTCTCAGACCAGTCAAATaGTATAGAGGGATAGTCTTC +
Preference number: 5 (lower is better)
Translates to: PGLACSARTPRCAAAPLPLRPVK*YRGIVF
Trigger: GAAGACTATCCCTCTATACAATTTGACTGGTCTGAG...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCCACACAGTGCAATTTTaGGGAAGCAGGGATGGGGAG +
Preference number: 5 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASHTVQF*GSRDGE
Trigger: CTCCCCATCCCTGCTTCCCAAAAATTGCACTGTGTG...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS TCA 90 bp GAGGGCTTGGCCACTTCACGTGCTTCCCGTAGTCTCGCATGGTCTTaGCGCCATGGAAGCGTCTGGCCACCTCGTGGATGTACGACTTCA +
Preference number: 5 (lower is better)
Translates to: EGLATSRASRSLAWS*RHGSVWPPRGCTTS
Trigger: TGAAGTCGTACATCCACGAGGTGGCCAGACGCTTCCATGGCGTCAAGACCATGCGAGACTACGGGAAGCACGTGAAGTGGCCAAGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
ENST00000585094.1
CDS CCA 90 bp CGTCTGCAGGGCCTCCTCAAAACGGCGAAGAACTTTAGGAGGGCTTaGCCACTTCACGTGCTTCCCGTAGTCTCGCATGGTCTTGACGCC +
Preference number: 5 (lower is better)
Translates to: RLQGLLKTAKNFRRA*PLHVLPVVSHGLDA
Trigger: GGCGTCAAGACCATGCGAGACTACGGGAAGCACGTGAAGTGGCCAAGCCCTCCTAAAGTTCTTCGCCGTTTTGAGGAGGCCCTGCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
ENST00000585094.1
CDS CCA 90 bp CTCCACGGAGACGGTGCACTTCTTCCCGTGCAGGCTGCACTGTACTaGGTTGGTGACGTTCACTTGAAGGTGGCGCTTCTCACCTCTCGT +
Preference number: 5 (lower is better)
Translates to: LHGDGALLPVQAALY*VGDVHLKVALLTSR
Trigger: ACGAGAGGTGAGAAGCGCCACCTTCAAGTGAACGTCACCAACCCAGTACAGTGCAGCCTGCACGGGAAGAAGTGCACCGTCTCCGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577576.1
CDS-3UTR CAA 90 bp CCTGGCCTGGCCTGCAGTGCCAGGACCCCACGCTGTGCTGCTGCCCCGCTTCCTGCTTCCAAAACACAGTaGGACTTAAGCAACATATTC +
Preference number: 5 (lower is better)
Translates to: PGLACSARTPRCAAAPLPASKTQ*DLSNIF
Trigger: GAATATGTTGCTTAAGTCCAACTGTGTTTTGGAAGC...AGGAAGCGGGGCAGCAGCACAGCGTGGGGTCCTGGCACTGCAGGCCAGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGGTCCCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCTCATTACGGTTGGTTTaGGCATTTCCAAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GSPGLAHLGQERWLWGSRSLRLV*AFPKAS
Trigger: GGAAGCTTTTGGAAATGCCAAAACCAACCGTAATGA...GCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGCGTAATATGGTTCCTTaGATGCAAGGTTGTCTACTA +
Preference number: 5 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVRNMVP*MQGCLL
Trigger: TAGTAGACAACCTTGCATCAAAGGAACCATATTACG...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGCAGACAATGAGGTCTTaGTTGTCTTTCGTATGGAAC +
Preference number: 5 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGQTMRS*LSFVWN
Trigger: GTTCCATACGAAAGACAACAAAGACCTCATTGTCTG...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTCCTGCCCTCCAGCCTTaGACAGGCAACTCATTTGGC +
Preference number: 5 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTPALQP*TGNSFG
Trigger: GCCAAATGAGTTGCCTGTCAAAGGCTGGAGGGCAGG...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGCTGATCCTTTTGCAGTaGCCACATACTGTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLLILLQ*PHTVAF
Trigger: AAAAGCCACAGTATGTGGCAACTGCAAAAGGATCAG...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATACGCTCATATATTGCCTaGGCAAAGGCGTCTCTGCCG +
Preference number: 5 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIRSYIA*AKASLP
Trigger: CGGCAGAGACGCCTTTGCCAAGGCAATATATGAGCG...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GCTGGCAGTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGACCTCAATAATATCATaGATGCGAGTAACGATCCAA +
Preference number: 5 (lower is better)
Translates to: AGSAPWHQFHGRRPQGAVTSIIS*MRVTIQ
Trigger: TTGGATCGTTACTCGCATCAATGATATTATTGAGGT...CACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCACTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTTCTGTAATGCTCAGTTaGCCTTCAGGCCACATATTC +
Preference number: 5 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSSVMLS*PSGHIF
Trigger: GAATATGTGGCCTGAAGGCAAACTGAGCATTACAGA...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GTGCTCCCTGGCACCAGTTTCACGGGCGCAGGCCCCAAGGGGCCGTGTAGAGGGCGTAATATGGTTCCTTaGATGCAAGGTTGTCTACTA +
Preference number: 5 (lower is better)
Translates to: VLPGTSFTGAGPKGPCRGRNMVP*MQGCLL
Trigger: TAGTAGACAACCTTGCATCAAAGGAACCATATTACG...CCCTCTACACGGCCCCTTGGGGCCTGCGCCCGTGAAACTGGTGCCAGGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGGATGCTCTCCATCTATaGAAAATCGTCTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVDALHL*KIVCRA
Trigger: GGCCCTGCAGACGATTTTCAATAGATGGAGAGCATC...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGGAGGCCGGAATGCTCTaGATGAGCTGGGATGCTCTC +
Preference number: 5 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKAEAGML*MSWDAL
Trigger: GAGAGCATCCCAGCTCATCAAGAGCATTCCGGCCTC...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGATAGTCTTCATCACCTaGTACTGTTTAGTGGGATCC +
Preference number: 5 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLIVFIT*YCLVGS
Trigger: GGATCCCACTAAACAGTACAAGGTGATGAAGACTAT...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAGCCTCTGGGGTGAGATaGGTCTGGACGTCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQASGVR*VWTSAQ
Trigger: CTGGGCTGACGTCCAGACCAATCTCACCCCAGAGGC...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCGGGCATGAGACCGGGTaGTTGGGACCACTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTGHETG*LGPLWG
Trigger: ACCCCAGAGTGGTCCCAACAACCCGGTCTCATGCCC...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS GCA 90 bp CGACTTCACTTTGTAGCGCCGGTAGTACCTGATTATTGTCAGAGCTaGCTTGGTTCTTTTGTACCGCATGCGGGCCAGGGTGCCCCGCCA +
Preference number: 5 (lower is better)
Translates to: RLHFVAPVVPDYCQS*LGSFVPHAGQGAPP
Trigger: TGGCGGGGCACCCTGGCCCGCATGCGGTACAAAAGAACCAAGGCAGCTCTGACAATAATCAGGTACTACCGGCGCTACAAAGTGAAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
ENST00000585094.1
CDS GCA 90 bp TGCCCCGCCACACCTCAGATGGAAATGCAGAAATCACCCGTGTTCTaGGTAGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTC +
Preference number: 5 (lower is better)
Translates to: CPATPQMEMQKSPVF*VAHAGSCRPELFLF
Trigger: GAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCTACGCAGAACACGGGTGATTTCTGCATTTCCATCTGAGGTGTGGCGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582217.1
CDS GCA 90 bp TTGTCAGAGCTGCCTTGGTTCTTTTGTACCGCATGCGGGCCAGGGTaGCCCGCCACACCTCAGATGGAAATGCAGAAATCACCCGTGTTC +
Preference number: 5 (lower is better)
Translates to: LSELPWFFCTACGPG*PATPQMEMQKSPVF
Trigger: GAACACGGGTGATTTCTGCATTTCCATCTGAGGTGTGGCGGGGCACCCTGGCCCGCATGCGGTACAAAAGAACCAAGGCAGCTCTGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582217.1
CDS CCA 90 bp CTCCACGGAGACGGTGCACTTCTTCCCGTGCAGGCTGCACTGTACTaGGTTGGTGACGTTCACTTGAAGGTGGCGCTTCTCACTCTTGAA +
Preference number: 5 (lower is better)
Translates to: LHGDGALLPVQAALY*VGDVHLKVALLTLE
Trigger: TTCAAGAGTGAGAAGCGCCACCTTCAAGTGAACGTCACCAACCCAGTACAGTGCAGCCTGCACGGGAAGAAGTGCACCGTCTCCGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
CDS-3UTR CAA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCTGGATCTCCTCAGGTTaGAAGCCAATGACTTTCATG +
Preference number: 5 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTWISSG*KPMTFM
Trigger: CATGAAAGTCATTGGCTTCAAACCTGAGGAGATCCA...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAGTATTCCTCTTGTTCTaGCTTCAGAACCAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEAVFLLF*LQNQLN
Trigger: ATTCAGCTGGTTCTGAAGCAAGAACAAGAGGAATAC...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCCAGGGCTGGCTCACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGTATTCCTCTTGTTCTaGCTTCAGAACCAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: PRAGSPWAREVAMGLPQSVFLLF*LQNQLN
Trigger: ATTCAGCTGGTTCTGAAGCAAGAACAAGAGGAATAC...ACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCATTTCATCGGTGACTTaGCCGACATTCATGCAAGCA +
Preference number: 5 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTISSVT*PTFMQA
Trigger: TGCTTGCATGAATGTCGGCAAAGTCACCGATGAAAT...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGATTGTCAGAGCTGCCTaGGTTCTTTTGTACCGCATG +
Preference number: 5 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVIVRAA*VLLYRM
Trigger: CATGCGGTACAAAAGAACCAAGGCAGCTCTGACAAT...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCACTCAGACCAGTCAAATaGTATAGAGGGATAGTCTTC +
Preference number: 5 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEALRPVK*YRGIVF
Trigger: GAAGACTATCCCTCTATACAATTTGACTGGTCTGAG...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTAGTTGGTCCTTTCCATaGGAGACACTCAGACCAGTC +
Preference number: 5 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPSWSFP*ETLRPV
Trigger: GACTGGTCTGAGTGTCTCCAATGGAAAGGACCAACT...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCGGGCATGAGACCGGGTaGTTGGGACCACTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSGHETG*LGPLWG
Trigger: ACCCCAGAGTGGTCCCAACAACCCGGTCTCATGCCC...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCAAGGGTGAAAGCATCTaGTTTCTGCTTCTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: HLGQERWLWGSRRVGSCIKGESI*FLLLLA
Trigger: TGCCAAGAGAAGCAGAAACAAGATGCTTTCACCCTT...GATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS CCA 90 bp TGGCTCTTTGTGAGGCTGGGCACTGTTCCCTCTGGTCCTCTTAGCTaGTTCTTGCCTCAGCCTTGGGAAGTTTTGAGCCCTTTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: WLFVRLGTVPSGPLS*FLPQPWEVLSPFLP
Trigger: TGGGAGGAAAGGGCTCAAAACTTCCCAAGGCTGAGGCAAGAACCAGCTAAGAGGACCAGAGGGAACAGTGCCCAGCCTCACAAAGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580547.1
CDS-3UTR CAA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGATGATAGATACTACTTaGCCATTCTCAATAAGAGGC +
Preference number: 5 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLMIDTT*PFSIRG
Trigger: GCCTCTTATTGAGAATGGCAAAGTAGTATCTATCAT...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATAGATCCCTTTGTGCTGTaGCTCCACGAGGTCAACAAT +
Preference number: 5 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIDPFVL*LHEVNN
Trigger: ATTGTTGACCTCGTGGAGCAACAGCACAAAGGGATC...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTTCCAAGATATTCTACTaGGTGCCGGCAGCGTTCATC +
Preference number: 5 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTSKIFY*VPAAFI
Trigger: GATGAACGCTGCCGGCACCAAGTAGAATATCTTGGA...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CGGCTGGGAGTTGGGTTGGGGTGGGTCCGCCGAACTCTGAGCAGAGCCTCCCTGAGGACATTCATGTATTaGTCCTTCCGTTTCAATTCA +
Preference number: 5 (lower is better)
Translates to: RLGVGLGWVRRTLSRASLRTFMY*SFRFNS
Trigger: TGAATTGAAACGGAAGGACAAATACATGAATGTCCT...CAGGGAGGCTCTGCTCAGAGTTCGGCGGACCCACCCCAACCCAACTCCCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCCTCTGGGAGGGGCCCTCGCAGCAGGTTTCTAGCGGGCATGGGTTGGGAGGCAACAATGAGGTCTTTGTaGTCTTTCGTATGGAACACT +
Preference number: 5 (lower is better)
Translates to: SSGRGPRSRFLAGMGWEATMRSL*SFVWNT
Trigger: AGTGTTCCATACGAAAGACAACAAAGACCTCATTGT...TGCCTCCCAACCCATGCCCGCTAGAAACCTGCTGCGAGGGCCCCTCCCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCCAGACAATGAGGTCTTaGTTGTCTTTCGTATGGAAC +
Preference number: 5 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASQTMRS*LSFVWN
Trigger: GTTCCATACGAAAGACAACAAAGACCTCATTGTCTG...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAACAGTACATCCCTCTCTaGCACCTCTGCCCACTCCAC +
Preference number: 5 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQQYIPL*HLCPLH
Trigger: GTGGAGTGGGCAGAGGTGCAAGAGAGGGATGTACTG...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAGCTGCACACAGGCACTaGGTGGGTTCTGCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQAAHRH*VGSAGS
Trigger: TGACCCGGCAGAACCCACCAAGTGCCTGTGTGCAGC...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATATGCCAGCGGGATTCTTaGTTGCAAACTGCACACAGT +
Preference number: 5 (lower is better)
Translates to: NHARFLSPQRPGHVTEIICQRDS*LQTAHS
Trigger: ACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCA...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGAAGAGAACCCCCTCATaGTCTACAATCATGCCCGCT +
Preference number: 5 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRKRTPS*STIMPA
Trigger: AGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTT...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGGCAATATTTCTTCATTaGAGCTGGGCACTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVAIFLH*SWALRR
Trigger: CCTCCTTAGTGCCCAGCTCAAATGAAGAAATATTGC...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS-3UTR CAA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCAATCTGAGCCTGAGGTaGGCCATGAACTCGGGCATG +
Preference number: 5 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTNLSLR*AMNSGM
Trigger: CATGCCCGAGTTCATGGCCAACCTCAGGCTCAGATT...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318217.10
CDS-3UTR CAA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTATTTCATCGGTGACTTaGCCGACATTCATGCAAGCA +
Preference number: 5 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPISSVT*PTFMQA
Trigger: TGCTTGCATGAATGTCGGCAAAGTCACCGATGAAAT...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCGAAAAATGGGCGTGTTaGCCCAATTTACTGTTAAGT +
Preference number: 5 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTEKWAC*PNLLLS
Trigger: ACTTAACAGTAAATTGGGCAAACACGCCCATTTTTC...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp ACCTTGGGCAAGAGAGGTGGCTATGGGGCTCCCGCAGAGTGGGGTCCTGCATCCGAAAAATGGGCGTGTTaGCCCAATTTACTGTTAAGT +
Preference number: 5 (lower is better)
Translates to: TLGKRGGYGAPAEWGPASEKWAC*PNLLLS
Trigger: ACTTAACAGTAAATTGGGCAAACACGCCCATTTTTC...GGATGCAGGACCCCACTCTGCGGGAGCCCCATAGCCACCTCTCTTGCCCAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GAAGGATGGACTCACTCTGCTGGATGGGCTGTTCCGCTCCTGCCACTGGCTCCTTCAGGCCACATATTCTaGAGCACAGGATTTGAACTG +
Preference number: 5 (lower is better)
Translates to: EGWTHSAGWAVPLLPLAPSGHIF*STGFEL
Trigger: CAGTTCAAATCCTGTGCTCAAGAATATGTGGCCTGA...AGGAGCCAGTGGCAGGAGCGGAACAGCCCATCCAGCAGAGTGAGTCCATCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCATCTGTGGAGATTTCTaGTCATTGGGTTTGATGCAA +
Preference number: 5 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTICGDF*SLGLMQ
Trigger: TTGCATCAAACCCAATGACAAGAAATCTCCACAGAT...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTGCTGCCTTGGTTCTTTaGTACCGCATGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIAALVL*YRMRAR
Trigger: CCTGGCCCGCATGCGGTACAAAAGAACCAAGGCAGC...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp AATCATGCCCGCTTCCTTTCCCCTCAGCGCCCGGGACACGTGACCGAGATCATAATTGTCAGAGCTGCCTaGGTTCTTTTGTACCGCATG +
Preference number: 5 (lower is better)
Translates to: NHARFLSPQRPGHVTEIIIVRAA*VLLYRM
Trigger: CATGCGGTACAAAAGAACCAAGGCAGCTCTGACAAT...TATGATCTCGGTCACGTGTCCCGGGCGCTGAGGGGAAAGGAAGCGGGCATGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGCGCTGGGGCTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCACAATGAGGTCTTTGTaGTCTTTCGTATGGAACACT +
Preference number: 5 (lower is better)
Translates to: GAGAKGPKAPSKGWEERTTMRSL*SFVWNT
Trigger: AGTGTTCCATACGAAAGACAACAAAGACCTCATTGT...GGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAGCCCCAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTCAGGGCTGGCTCACCTaGGGCAAGAGAGGTGGCTAT +
Preference number: 5 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIQGWLT*GKRGGY
Trigger: ATAGCCACCTCTCTTGCCCAAGGTGAGCCAGCCCTG...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAACCGTCATCCCGTGTCTaGACCCCGCCCTTGCTGTTT +
Preference number: 5 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQPSSRV*TPPLLF
Trigger: AAACAGCAAGGGCGGGGTCAAGACACGGGATGACGG...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS CCA 90 bp GGCACTGTTCCCTCTGGTCCTCTTAGCTGGTTCTTGCCTCAGCCTTaGGAAGTTTTGAGCCCTTTCCTCCCAACTGCTGACAAGAACACA +
Preference number: 5 (lower is better)
Translates to: GTVPSGPLSWFLPQP*EVLSPFLPTADKNT
Trigger: TGTGTTCTTGTCAGCAGTTGGGAGGAAAGGGCTCAAAACTTCCCAAGGCTGAGGCAAGAACCAGCTAAGAGGACCAGAGGGAACAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580547.1
CDS-3UTR CAA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAAGCACGAAGTCTGCCTaGCCGAATTCCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQSTKSA*PNSRLS
Trigger: GGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCT...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318217.10
CDS-3UTR CAA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGCCAAACCTGCTTGAGTaGTCATTACGGTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRPNLLE*SLRLVL
Trigger: CAAAACCAACCGTAATGACAACTCAAGCAGGTTTGG...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGTCTTTCTCCTGGCTGTaGCACAATCACTCGAGACTT +
Preference number: 5 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKASFSWL*HNHSRL
Trigger: AAGTCTCGAGTGATTGTGCAACAGCCAGGAGAAAGA...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAGAAGGAAGGTCATGGTaGGGCCAGGTGAATTCAGAG +
Preference number: 5 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQEGRSW*GQVNSE
Trigger: CTCTGAATTCACCTGGCCCAACCATGACCTTCCTTC...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTGAGGCCGGAATGCTCTaGATGAGCTGGGATGCTCTC +
Preference number: 5 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIEAGML*MSWDAL
Trigger: GAGAGCATCCCAGCTCATCAAGAGCATTCCGGCCTC...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCGTTGGTGACGTTCACTaGAAGGTGGCGCTTCTCACT +
Preference number: 5 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCVGDVH*KVALLT
Trigger: AGTGAGAAGCGCCACCTTCAAGTGAACGTCACCAAC...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS TCA 90 bp CCACCTCGTGGATGTACGACTTCACTTTGTAGCGCCGGTAGTACCTaGTTATTGTCAGAGCTGCCTTGGTTCTTTTGTACCGCATGCGGG +
Preference number: 5 (lower is better)
Translates to: PPRGCTTSLCSAGST*LLSELPWFFCTACG
Trigger: CCCGCATGCGGTACAAAAGAACCAAGGCAGCTCTGACAATAATCAGGTACTACCGGCGCTACAAAGTGAAGTCGTACATCCACGAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
ENST00000585094.1
CDS GCA 90 bp TGGATGCAGCACACAGCAGCACGTTCTTACCTATTGAAAATCGTCTaGAGGGCCTCCTCAAAACGGCGAAGAACTTTAGGAGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: WMQHTAARSYLLKIV*RASSKRRRTLGGLG
Trigger: GCCAAGCCCTCCTAAAGTTCTTCGCCGTTTTGAGGAGGCCCTGCAGACGATTTTCAATAGGTAAGAACGTGCTGCTGTGTGCTGCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585094.1
CDS-3UTR CAA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGCTTTATACTGCTCAATaGTGTCTCTTCCATAGATGT +
Preference number: 5 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVLYTAQ*CLFHRC
Trigger: ACATCTATGGAAGAGACACAATTGAGCAGTATAAAG...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGATGATAGATACTACTTaGCCATTCTCAATAAGAGGC +
Preference number: 5 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVMIDTT*PFSIRG
Trigger: GCCTCTTATTGAGAATGGCAAAGTAGTATCTATCAT...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGCTGCCCTCACCCTGGCAGCTCCCCGTTCTCATTAGGGTTCCTGACCCAAGTGACCTCAATAATATCATaGATGCGAGTAACGATCCAA +
Preference number: 5 (lower is better)
Translates to: GCPHPGSSPFSLGFLTQVTSIIS*MRVTIQ
Trigger: TTGGATCGTTACTCGCATCAATGATATTATTGAGGT...CACTTGGGTCAGGAACCCTAATGAGAACGGGGAGCTGCCAGGGTGAGGGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGGCTGCCTTGGTTCTTTaGTACCGCATGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMAALVL*YRMRAR
Trigger: CCTGGCCCGCATGCGGTACAAAAGAACCAAGGCAGC...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCACACACAGTGCAATTTTaGGGAAGCAGGGATGGGGAG +
Preference number: 5 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSAHTVQF*GSRDGE
Trigger: CTCCCCATCCCTGCTTCCCAAAAATTGCACTGTGTG...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCCAGCGGGATTCTTTGTaGCAAACTGCACACAGTGCA +
Preference number: 5 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTQRDSL*QTAHSA
Trigger: TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTG...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TGGTCTCAGAAGGCCCCTGAAGCATACGTGCTTTTGCTGGGCAGAAACTGGCAAAAGAGAACCCCCTCATaGTCTACAATCATGCCCGCT +
Preference number: 5 (lower is better)
Translates to: WSQKAPEAYVLLLGRNWQKRTPS*STIMPA
Trigger: AGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTT...TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTCAGGGGCCTTCTGAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGAGCACGAAGTCTGCCTaGCCGAATTCCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMSTKSA*PNSRLS
Trigger: GGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCGAGGTGTATCTGGCTTaGAAGCAAGATAGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTEVYLA*KQDSCP
Trigger: AGGGCAACTATCTTGCTTCAAAGCCAGATACACCTC...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGAATCTGAGCCTGAGGTaGGCCATGAACTCGGGCATG +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMNLSLR*AMNSGM
Trigger: CATGCCCGAGTTCATGGCCAACCTCAGGCTCAGATT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CCTTGGTGGCAAAGGGAGTCTCCCAGGGGAGAACCTGGGAAGGATGGACTCACTAATCTTATACACTGTTaGGATCTCCTCAGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: PWWQRESPRGEPGKDGLTNLIHC*DLLRFE
Trigger: TTCAAACCTGAGGAGATCCAAACAGTGTATAAGATT...AGTGAGTCCATCCTTCCCAGGTTCTCCCCTGGGAGACTCCCTTTGCCACCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CTAAGGGGCCCAAGGCACCATCCAAAGGCTGGGAGGAAAGAACCCAAACCCAGGAATCTTATACACTGTTaGGATCTCCTCAGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: LRGPRHHPKAGRKEPKPRNLIHC*DLLRFE
Trigger: TTCAAACCTGAGGAGATCCAAACAGTGTATAAGATT...CCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTTGGGCCCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTAAAGGCGCTCATATATaGCCTTGGCAAAGGCGTCTC +
Preference number: 5 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIKGAHI*PWQRRL
Trigger: GAGACGCCTTTGCCAAGGCAATATATGAGCGCCTTT...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp ATCAAGAGAACCCCCTCATTGTCTACAATCATGCCCGCTTCCTTTCCCCTCAGCTTCTTGACAGCCTCTTaGTCTGAAGGAAGGTCATGG +
Preference number: 5 (lower is better)
Translates to: IKRTPSLSTIMPASFPLSFLTAS*SEGRSW
Trigger: CCATGACCTTCCTTCAGACAAAGAGGCTGTCAAGAA...GCTGAGGGGAAAGGAAGCGGGCATGATTGTAGACAATGAGGGGGTTCTCTTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGCGTTCAATTAGTTTCTaGACAGCCTCTTTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKARSISF*TASLSE
Trigger: TTCAGACAAAGAGGCTGTCAAGAAACTAATTGAACG...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAGAGGTGTATCTGGCTTaGAAGCAAGATAGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: SQGQDASGILCCKLHTVQEVYLA*KQDSCP
Trigger: AGGGCAACTATCTTGCTTCAAAGCCAGATACACCTC...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTAGTTGGTCCTTTCCATaGGAGACACTCAGACCAGTC +
Preference number: 5 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAISWSFP*ETLRPV
Trigger: GACTGGTCTGAGTGTCTCCAATGGAAAGGACCAACT...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp AGGAGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCATGGAACACTACAAGTaGGTCCTTTCCATTGGAGAC +
Preference number: 5 (lower is better)
Translates to: RRSVCGRTGRSFSTSLSCMEHYK*VLSIGD
Trigger: GTCTCCAATGGAAAGGACCAACTTGTAGTGTTCCAT...GCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAGAAGCATACGTGCTTTaGCTGGGCAGAAACTGGCAA +
Preference number: 5 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQEAYVL*LGRNWQ
Trigger: TTGCCAGTTTCTGCCCAGCAAAAGCACGTATGCTTC...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CTTGCTGTTTCTCTGAGTAGGAAACGCAGCGGGAGGTGGTCCAGAGGGAAAGCGCTTTATACTGCTCAATaGTGTCTCTTCCATAGATGT +
Preference number: 5 (lower is better)
Translates to: LAVSLSRKRSGRWSRGKALYTAQ*CLFHRC
Trigger: ACATCTATGGAAGAGACACAATTGAGCAGTATAAAG...CGCTTTCCCTCTGGACCACCTCCCGCTGCGTTTCCTACTCAGAGAAACAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp AGAAGTGTCTGTGGCAGGACGGGAAGAAGCTTCAGTACATCCCTCTCTTGCACCTCAAACTCCAGAATTTaGTCTGAGGCACAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: RSVCGRTGRSFSTSLSCTSNSRI*SEAQSF
Trigger: AAAGCTCTGTGCCTCAGACAAAATTCTGGAGTTTGA...GGTGCAAGAGAGGGATGTACTGAAGCTTCTTCCCGTCCTGCCACAGACACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGGAAGGAAGGTCATGGTaGGGCCAGGTGAATTCAGAG +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMEGRSW*GQVNSE
Trigger: CTCTGAATTCACCTGGCCCAACCATGACCTTCCTTC...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGGATGCTCTCCATCTATaGAAAATCGTCTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GQDASGILCCKLHTVQFLDALHL*KIVCRA
Trigger: GGCCCTGCAGACGATTTTCAATAGATGGAGAGCATC...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CTAAACCTAACAGACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAAGCACGAAGTCTGCCTaGCCGAATTCCAGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LNLTDRYKPVSPRGSSHKSTKSA*PNSRLS
Trigger: GGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCT...TTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTCTGTTAGGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGAAAGGCGCTCATATATaGCCTTGGCAAAGGCGTCTC +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMKGAHI*PWQRRL
Trigger: GAGACGCCTTTGCCAAGGCAATATATGAGCGCCTTT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGGATCCCTTTGTGCTGTaGCTCCACGAGGTCAACAAT +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMDPFVL*LHEVNN
Trigger: ATTGTTGACCTCGTGGAGCAACAGCACAAAGGGATC...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGATTGCAATGATCCCTTaGTGCTGTTGCTCCACGAGG +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMIAMIP*CCCSTR
Trigger: CCTCGTGGAGCAACAGCACAAAGGGATCATTGCAAT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATCAAACTCCAGAATTTaGTCTGAGGCACAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: SQGQDASGILCCKLHTVQSNSRI*SEAQSF
Trigger: AAAGCTCTGTGCCTCAGACAAAATTCTGGAGTTTGA...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAGGAGATTTCTTGTCATaGGGTTTGATGCAACGAACG +
Preference number: 5 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQGDFLS*GLMQRT
Trigger: CGTTCGTTGCATCAAACCCAATGACAAGAAATCTCC...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTGGAGATTTCTTGTCATaGGGTTTGATGCAACGAACG +
Preference number: 5 (lower is better)
Translates to: PRTGCQRDSLLQTAHSAIGDFLS*GLMQRT
Trigger: CGTTCGTTGCATCAAACCCAATGACAAGAAATCTCC...AATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTCCAAGATATTCTACTaGGTGCCGGCAGCGTTCATC +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMSKIFY*VPAAFI
Trigger: GATGAACGCTGCCGGCACCAAGTAGAATATCTTGGA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGAGTTGGTCCTTTCCATaGGAGACACTCAGACCAGTC +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMSWSFP*ETLRPV
Trigger: GACTGGTCTGAGTGTCTCCAATGGAAAGGACCAACT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS CCA 90 bp GCCCGACGCACTCTCACATTTTCCAGTAGTCCAAGATATTCTACTTaGTGCCGGCAGCGTTCATCATCAAATATCTGTGGAGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: ARRTLTFSSSPRYST*CRQRSSSNICGDFL
Trigger: CAAGAAATCTCCACAGATATTTGATGATGAACGCTGCCGGCACCAAGTAGAATATCTTGGACTACTGGAAAATGTGAGAGTGCGTCGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
CDS-3UTR CAA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAGCTTCCAAAACACAGTaGGACTTAAGCAACATATTC +
Preference number: 5 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSAASKTQ*DLSNIF
Trigger: GAATATGTTGCTTAAGTCCAACTGTGTTTTGGAAGC...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GAGAATGAGAAAGGGTTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAATCATTACGGTTGGTTTaGGCATTTCCAAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: ENEKGFPRTGCQRDSLLQSLRLV*AFPKAS
Trigger: GGAAGCTTTTGGAAATGCCAAAACCAACCGTAATGA...TTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAACCCTTTCTCATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTCTTTCTCCTGGCTGTaGCACAATCACTCGAGACTT +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMSFSWL*HNHSRL
Trigger: AAGTCTCGAGTGATTGTGCAACAGCCAGGAGAAAGA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGCCGTAGCTGGCCTCTaGTTCTGTGTGCTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLAVAGL*FCVLLV
Trigger: GACAAGCAGCACACAGAACAAGAGGCCAGCTACGGC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp AGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTTTAGCCGTAGCTGGCCTCTaGTTCTGTGTGCTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: RYKPVSPRGSSHKVKTGLAVAGL*FCVLLV
Trigger: GACAAGCAGCACACAGAACAAGAGGCCAGCTACGGC...TAAACCTGTTTTCACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGTCTGTAATGCTCAGTTaGCCTTCAGGCCACATATTC +
Preference number: 5 (lower is better)
Translates to: GQDASGILCCKLHTVQFLSVMLS*PSGHIF
Trigger: GAATATGTGGCCTGAAGGCAAACTGAGCATTACAGA...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CTTGGTCACCTCTGTAATGCTCAGTTTGCCTTCAGGCCACATATTCTTGAGCACTCTGTAATGCTCAGTTaGCCTTCAGGCCACATATTC +
Preference number: 5 (lower is better)
Translates to: LGHLCNAQFAFRPHILEHSVMLS*PSGHIF
Trigger: GAATATGTGGCCTGAAGGCAAACTGAGCATTACAGA...GTGCTCAAGAATATGTGGCCTGAAGGCAAACTGAGCATTACAGAGGTGACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR CAA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAATCTGTGGAGATTTCTaGTCATTGGGTTTGATGCAA +
Preference number: 5 (lower is better)
Translates to: SQGQDASGILCCKLHTVQICGDF*SLGLMQ
Trigger: TTGCATCAAACCCAATGACAAGAAATCTCCACAGAT...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGAGGCCGGAATGCTCTaGATGAGCTGGGATGCTCTC +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLEAGML*MSWDAL
Trigger: GAGAGCATCCCAGCTCATCAAGAGCATTCCGGCCTC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGGAGGTGTATCTGGCTTaGAAGCAAGATAGTTGCCCT +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMEVYLA*KQDSCP
Trigger: AGGGCAACTATCTTGCTTCAAAGCCAGATACACCTC...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGATGGAACACTACAAGTaGGTCCTTTCCATTGGAGAC +
Preference number: 5 (lower is better)
Translates to: GQDASGILCCKLHTVQFLMEHYK*VLSIGD
Trigger: GTCTCCAATGGAAAGGACCAACTTGTAGTGTTCCAT...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGCTGATCCTTTTGCAGTaGCCACATACTGTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: GQDASGILCCKLHTVQFLLILLQ*PHTVAF
Trigger: AAAAGCCACAGTATGTGGCAACTGCAAAAGGATCAG...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TTCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTAGTTTTATCCCCTaGTTAGACTGTGTGTTCCAC +
Preference number: 5 (lower is better)
Translates to: FPRTGCQRDSLLQTAHSAISFIP*LDCVFH
Trigger: GTGGAACACACAGTCTAACAAGGGGATAAAACTAAT...TGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS-3UTR CAA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTGTTTCTGCTTCTCTaGGCAAAAATCATGGTTTCC +
Preference number: 5 (lower is better)
Translates to: SQGQDASGILCCKLHTVQLFLLL*AKIMVS
Trigger: GGAAACCATGATTTTTGCCAAGAGAAGCAGAAACAA...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS-3UTR CAA 90 bp TCTACTAGAGCAATCATAGAATTCTTAAACAAGGTAGCAGCAGTCAGAGGTCGCGGGAGGTCAAGTGACTaGCCTAAGGTTCACTCAGTG +
Preference number: 5 (lower is better)
Translates to: STRAIIEFLNKVAAVRGRGRSSD*PKVHSV
Trigger: CACTGAGTGAACCTTAGGCAAGTCACTTGACCTCCC...GCGACCTCTGACTGCTGCTACCTTGTTTAAGAATTCTATGATTGCTCTAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCGCTCATATATTGCCTaGGCAAAGGCGTCTCTGCCG +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLRSYIA*AKASLP
Trigger: CGGCAGAGACGCCTTTGCCAAGGCAATATATGAGCG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp AGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTTTACGCTCATATATTGCCTaGGCAAAGGCGTCTCTGCCG +
Preference number: 5 (lower is better)
Translates to: RYKPVSPRGSSHKVKTGLRSYIA*AKASLP
Trigger: CGGCAGAGACGCCTTTGCCAAGGCAATATATGAGCG...TAAACCTGTTTTCACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGATTTCATCGGTGACTTaGCCGACATTCATGCAAGCA +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMISSVT*PTFMQA
Trigger: TGCTTGCATGAATGTCGGCAAAGTCACCGATGAAAT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTCTGTAATGCTCAGTTaGCCTTCAGGCCACATATTC +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMSVMLS*PSGHIF
Trigger: GAATATGTGGCCTGAAGGCAAACTGAGCATTACAGA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp TCCCAAGGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAAAGGACATTCATGTATTaGTCCTTCCGTTTCAATTCA +
Preference number: 5 (lower is better)
Translates to: SQGQDASGILCCKLHTVQRTFMY*SFRFNS
Trigger: TGAATTGAAACGGAAGGACAAATACATGAATGTCCT...TTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCCTTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS GCA 90 bp CGACGCACTCTCACATTTTCCAGTAGTCCAAGATATTCTACTTGGTaGCGGCAGCGTTCATCATCAAATATCTGTGGAGATTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: RRTLTFSSSPRYSTW*RQRSSSNICGDFLS
Trigger: TGACAAGAAATCTCCACAGATATTTGATGATGAACGCTGCCGGCACCAAGTAGAATATCTTGGACTACTGGAAAATGTGAGAGTGCGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTCATTACGGTTGGTTTaGGCATTTCCAAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMSLRLV*AFPKAS
Trigger: GGAAGCTTTTGGAAATGCCAAAACCAACCGTAATGA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp GACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTTCTTTCTCCTGGCTGTaGCACAATCACTCGAGACTT +
Preference number: 5 (lower is better)
Translates to: DRYKPVSPRGSSHKVKTGSFSWL*HNHSRL
Trigger: AAGTCTCGAGTGATTGTGCAACAGCCAGGAGAAAGA...ACCTGTTTTCACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp CTAAACCTAACAGACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAAAAGGCGCTCATATATaGCCTTGGCAAAGGCGTCTC +
Preference number: 5 (lower is better)
Translates to: LNLTDRYKPVSPRGSSHKKGAHI*PWQRRL
Trigger: GAGACGCCTTTGCCAAGGCAATATATGAGCGCCTTT...TTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTCTGTTAGGTTTAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTCAAACTCCAGAATTTaGTCTGAGGCACAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMSNSRI*SEAQSF
Trigger: AAAGCTCTGTGCCTCAGACAAAATTCTGGAGTTTGA...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTGGTCACCTCTGTAATGCTCAGTTTGCCTTCAGGCCACATATTCTTGAGCACCGTAATATGGTTCCTTaGATGCAAGGTTGTCTACTA +
Preference number: 5 (lower is better)
Translates to: LGHLCNAQFAFRPHILEHRNMVP*MQGCLL
Trigger: TAGTAGACAACCTTGCATCAAAGGAACCATATTACG...GTGCTCAAGAATATGTGGCCTGAAGGCAAACTGAGCATTACAGAGGTGACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR CAA 90 bp AGAGCAATCATAGAATTCTTAAACAAGGTAGCAGCAGTCAGAGGTCGCTTGGTCGGAGATTTCTTGTCATaGGGTTTGATGCAACGAACG +
Preference number: 5 (lower is better)
Translates to: RAIIEFLNKVAAVRGRLVGDFLS*GLMQRT
Trigger: CGTTCGTTGCATCAAACCCAATGACAAGAAATCTCC...GACCAAGCGACCTCTGACTGCTGCTACCTTGTTTAAGAATTCTATGATTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR CAA 90 bp CTTGGTCACCTCTGTAATGCTCAGTTTGCCTTCAGGCCACATATTCTTGAGCACATCTGTGGAGATTTCTaGTCATTGGGTTTGATGCAA +
Preference number: 5 (lower is better)
Translates to: LGHLCNAQFAFRPHILEHICGDF*SLGLMQ
Trigger: TTGCATCAAACCCAATGACAAGAAATCTCCACAGAT...GTGCTCAAGAATATGTGGCCTGAAGGCAAACTGAGCATTACAGAGGTGACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR CAA 90 bp GGACAGGATGCCAGCGGGATTCTTTGTTGCAAACTGCACACAGTGCAATTTTTGCGTTCAATTAGTTTCTaGACAGCCTCTTTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: GQDASGILCCKLHTVQFLRSISF*TASLSE
Trigger: TTCAGACAAAGAGGCTGTCAAGAAACTAATTGAACG...CAAAAATTGCACTGTGTGCAGTTTGCAACAAAGAATCCCGCTGGCATCCTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318217.10
ENST00000394649.8
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGATAGTCTTCATCACCTaGTACTGTTTAGTGGGATCC +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMIVFIT*YCLVGS
Trigger: GGATCCCACTAAACAGTACAAGGTGATGAAGACTAT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGCAGACAATGAGGTCTTaGTTGTCTTTCGTATGGAAC +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMQTMRS*LSFVWN
Trigger: GTTCCATACGAAAGACAACAAAGACCTCATTGTCTG...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS GCA 90 bp CTTTCGGCTGGAAAAATGGGCGTGTTTGCCCAATTTACTGTTAAGTaGTTCAAGAAACATTTCATCGGTGACTTTGCCGACATTCATGCA +
Preference number: 5 (lower is better)
Translates to: LSAGKMGVFAQFTVK*FKKHFIGDFADIHA
Trigger: TGCATGAATGTCGGCAAAGTCACCGATGAAATGTTTCTTGAAGCACTTAACAGTAAATTGGGCAAACACGCCCATTTTTCCAGCCGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000580538.5
ENST00000582751.1
ENST00000584232.5
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGGCTTCCAAAACACAGTaGGACTTAAGCAACATATTC +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMASKTQ*DLSNIF
Trigger: GAATATGTTGCTTAAGTCCAACTGTGTTTTGGAAGC...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp GGTTTACTGGTTCTAACTCAGGATGTTCTGGGCATCAACAAGGCAGTCTATCAATCATTACGGTTGGTTTaGGCATTTCCAAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GLLVLTQDVLGINKAVYQSLRLV*AFPKAS
Trigger: GGAAGCTTTTGGAAATGCCAAAACCAACCGTAATGA...TTGATAGACTGCCTTGTTGATGCCCAGAACATCCTGAGTTAGAACCAGTAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp GGTTTACTGGTTCTAACTCAGGATGTTCTGGGCATCAACAAGGCAGTCTATCAAGTATTCCTCTTGTTCTaGCTTCAGAACCAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: GLLVLTQDVLGINKAVYQVFLLF*LQNQLN
Trigger: ATTCAGCTGGTTCTGAAGCAAGAACAAGAGGAATAC...TTGATAGACTGCCTTGTTGATGCCCAGAACATCCTGAGTTAGAACCAGTAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp TCTACTAGAGCAATCATAGAATTCTTAAACAAGGTAGCAGCAGTCAGAGGTCGCTCAGGCCACATATTCTaGAGCACAGGATTTGAACTG +
Preference number: 5 (lower is better)
Translates to: STRAIIEFLNKVAAVRGRSGHIF*STGFEL
Trigger: CAGTTCAAATCCTGTGCTCAAGAATATGTGGCCTGA...GCGACCTCTGACTGCTGCTACCTTGTTTAAGAATTCTATGATTGCTCTAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGATCTGTGGAGATTTCTaGTCATTGGGTTTGATGCAA +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMICGDF*SLGLMQ
Trigger: TTGCATCAAACCCAATGACAAGAAATCTCCACAGAT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGATGCTCTCCATCTATaGAAAATCGTCTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLDALHL*KIVCRA
Trigger: GGCCCTGCAGACGATTTTCAATAGATGGAGAGCATC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp GGTTTACTGGTTCTAACTCAGGATGTTCTGGGCATCAACAAGGCAGTCTATCAAGCTTCCAAAACACAGTaGGACTTAAGCAACATATTC +
Preference number: 5 (lower is better)
Translates to: GLLVLTQDVLGINKAVYQASKTQ*DLSNIF
Trigger: GAATATGTTGCTTAAGTCCAACTGTGTTTTGGAAGC...TTGATAGACTGCCTTGTTGATGCCCAGAACATCCTGAGTTAGAACCAGTAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGAATCTTATACACTGTTaGGATCTCCTCAGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMNLIHC*DLLRFE
Trigger: TTCAAACCTGAGGAGATCCAAACAGTGTATAAGATT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp TCAGCCAGCATCCTCTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGACCTCAATAATATCATaGATGCGAGTAACGATCCAA +
Preference number: 5 (lower is better)
Translates to: SASILFISVCHVILGLFMTSIIS*MRVTIQ
Trigger: TTGGATCGTTACTCGCATCAATGATATTATTGAGGT...CATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAGAGGATGCTGGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp TCTACTAGAGCAATCATAGAATTCTTAAACAAGGTAGCAGCAGTCAGAGGTCGCTCAAACTCCAGAATTTaGTCTGAGGCACAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: STRAIIEFLNKVAAVRGRSNSRI*SEAQSF
Trigger: AAAGCTCTGTGCCTCAGACAAAATTCTGGAGTTTGA...GCGACCTCTGACTGCTGCTACCTTGTTTAAGAATTCTATGATTGCTCTAGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577252.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTTTCTTGACAGCCTCTTaGTCTGAAGGAAGGTCATGG +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLFLTAS*SEGRSW
Trigger: CCATGACCTTCCTTCAGACAAAGAGGCTGTCAAGAA...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTATTGTCAGAGCTGCCTaGGTTCTTTTGTACCGCATG +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLIVRAA*VLLYRM
Trigger: CATGCGGTACAAAAGAACCAAGGCAGCTCTGACAAT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS TCA 90 bp TGTTCAACAACTTGTAAGGGTTCACAGAAACGACGACTTCTCCAATaGACGTATAGATGCGCCCTTTTTCAAATCTTGCCAGTTCTTAGA +
Preference number: 5 (lower is better)
Translates to: CSTTCKGSQKRRLLQ*TYRCALFQILPVLR
Trigger: TCTAAGAACTGGCAAGATTTGAAAAAGGGCGCATCTATACGTTCATTGGAGAAGTCGTCGTTTCTGTGAACCCTTACAAGTTGTTGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS GCA 90 bp TTTAGTGGGATCCATTTTATACAGGTGACGGTCAGTGACAAAAATTaGTCTGTCTTCCACCTTACTAAATCGATTTACCTTACGGACGTG +
Preference number: 5 (lower is better)
Translates to: FSGIHFIQVTVSDKN*SVFHLTKSIYLTDV
Trigger: CACGTCCGTAAGGTAAATCGATTTAGTAAGGTGGAAGACAGAGCAATTTTTGTCACTGACCGTCACCTGTATAAAATGGATCCCACTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS CCA 90 bp AAGATATTCTACTTGGTGCCGGCAGCGTTCATCATCAAATATCTGTaGAGATTTCTTGTCATTGGGTTTGATGCAACGAACGTAATATGG +
Preference number: 5 (lower is better)
Translates to: KIFYLVPAAFIIKYL*RFLVIGFDATNVIW
Trigger: CCATATTACGTTCGTTGCATCAAACCCAATGACAAGAAATCTCCACAGATATTTGATGATGAACGCTGCCGGCACCAAGTAGAATATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
CDS CCA 90 bp CAGACAATGAGGTCTTTGTTGTCTTTCGTATGGAACACTACAAGTTaGTCCTTTCCATTGGAGACACTCAGACCAGTCAAATTGTATAGA +
Preference number: 5 (lower is better)
Translates to: QTMRSLLSFVWNTTS*SFPLETLRPVKLYR
Trigger: TCTATACAATTTGACTGGTCTGAGTGTCTCCAATGGAAAGGACCAACTTGTAGTGTTCCATACGAAAGACAACAAAGACCTCATTGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCCAAACCTGCTTGAGTaGTCATTACGGTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLPNLLE*SLRLVL
Trigger: CAAAACCAACCGTAATGACAACTCAAGCAGGTTTGG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp GTAGAAGAGGAGAAAAAGGAGGAAAAAGGGAAGAAGAAACTAGATTCTGAAGCACCAAACCTGCTTGAGTaGTCATTACGGTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: VEEEKKEEKGKKKLDSEAPNLLE*SLRLVL
Trigger: CAAAACCAACCGTAATGACAACTCAAGCAGGTTTGG...TGCTTCAGAATCTAGTTTCTTCTTCCCTTTTTCCTCCTTTTTCTCCTCTTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTTGGATCTCCTCAGGTTaGAAGCCAATGACTTTCATG +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLWISSG*KPMTFM
Trigger: CATGAAAGTCATTGGCTTCAAACCTGAGGAGATCCA...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp GTAGAAGAGGAGAAAAAGGAGGAAAAAGGGAAGAAGAAACTAGATTCTGAAGCATGGATCTCCTCAGGTTaGAAGCCAATGACTTTCATG +
Preference number: 5 (lower is better)
Translates to: VEEEKKEEKGKKKLDSEAWISSG*KPMTFM
Trigger: CATGAAAGTCATTGGCTTCAAACCTGAGGAGATCCA...TGCTTCAGAATCTAGTTTCTTCTTCCCTTTTTCCTCCTTTTTCTCCTCTTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp AGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTTTACTGGTTCTAACTCAGAATCTTATACACTGTTaGGATCTCCTCAGGTTTGAA +
Preference number: 5 (lower is better)
Translates to: SPRGSSHKVKTGLLVLTQNLIHC*DLLRFE
Trigger: TTCAAACCTGAGGAGATCCAAACAGTGTATAAGATT...CTGAGTTAGAACCAGTAAACCTGTTTTCACTTTATGGCTGCTACCACGTGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTTCAGGCCACATATTCTaGAGCACAGGATTTGAACTG +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLSGHIF*STGFEL
Trigger: CAGTTCAAATCCTGTGCTCAAGAATATGTGGCCTGA...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGGAGATTTCTTGTCATaGGGTTTGATGCAACGAACG +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLGDFLS*GLMQRT
Trigger: CGTTCGTTGCATCAAACCCAATGACAAGAAATCTCC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTATGGAACACTACAAGTaGGTCCTTTCCATTGGAGAC +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLMEHYK*VLSIGD
Trigger: GTCTCCAATGGAAAGGACCAACTTGTAGTGTTCCAT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS TCA 90 bp GTCTTCATCACCTTGTACTGTTTAGTGGGATCCATTTTATACAGGTaGCGGTCAGTGACAAAAATTGCTCTGTCTTCCACCTTACTAAAT +
Preference number: 5 (lower is better)
Translates to: VFITLYCLVGSILYR*RSVTKIALSSTLLN
Trigger: ATTTAGTAAGGTGGAAGACAGAGCAATTTTTGTCACTGACCGTCACCTGTATAAAATGGATCCCACTAAACAGTACAAGGTGATGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS GCA 90 bp AAGAAGGGCTTTCTCAACCATATCTGTCTTAGTAGAGAGCAATTCTaGTATGATAGATACTACTTTGCCATTCTCAATAAGAGGCGTGTC +
Preference number: 5 (lower is better)
Translates to: KKGFLNHICLSREQF*YDRYYFAILNKRRV
Trigger: GACACGCCTCTTATTGAGAATGGCAAAGTAGTATCTATCATAGCAGAATTGCTCTCTACTAAGACAGATATGGTTGAGAAAGCCCTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000583621.1
CDS-3UTR CAA 90 bp GACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAAACAGGTATGATAGATACTACTTaGCCATTCTCAATAAGAGGC +
Preference number: 5 (lower is better)
Translates to: DRYKPVSPRGSSHKVKTGMIDTT*PFSIRG
Trigger: GCCTCTTATTGAGAATGGCAAAGTAGTATCTATCAT...ACCTGTTTTCACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGTATTCCTCTTGTTCTaGCTTCAGAACCAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLVFLLF*LQNQLN
Trigger: ATTCAGCTGGTTCTGAAGCAAGAACAAGAGGAATAC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCTCAGACCAGTCAAATaGTATAGAGGGATAGTCTTC +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLLRPVK*YRGIVF
Trigger: GAAGACTATCCCTCTATACAATTTGACTGGTCTGAG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS TCA 90 bp TTTTTCAAATCTTGCCAGTTCTTAGATGAGAATCTCTCCCAAGGGTaGAAGCATCTTGTTTCTGCTTCTCTTGGCAAAAATCATGGTTTC +
Preference number: 5 (lower is better)
Translates to: FFKSCQFLDENLSQG*KHLVSASLGKNHGF
Trigger: GAAACCATGATTTTTGCCAAGAGAAGCAGAAACAAGATGCTTTCACCCTTGGGAGAGATTCTCATCTAAGAACTGGCAAGATTTGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS GCA 90 bp CCTAAACTCCTTGTTATTCTAAGGTGCAGCAGAATTGAGAACCACTaGTTTGAAAGGATTAATGGATTTTCTAGTTTGAGTTATGCGTGG +
Preference number: 5 (lower is better)
Translates to: PKLLVILRCSRIENH*FERINGFSSLSYAW
Trigger: CCACGCATAACTCAAACTAGAAAATCCATTAATCCTTTCAAAGCAGTGGTTCTCAATTCTGCTGCACCTTAGAATAACAAGGAGTTTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623444.1
CDS-3UTR CAA 90 bp CTAACAGACAGATATAAACCAGTAAGTCCACGTGGTAGCAGCCATAAAGTGAAACTTTATACTGCTCAATaGTGTCTCTTCCATAGATGT +
Preference number: 5 (lower is better)
Translates to: LTDRYKPVSPRGSSHKVKLYTAQ*CLFHRC
Trigger: ACATCTATGGAAGAGACACAATTGAGCAGTATAAAG...TTTCACTTTATGGCTGCTACCACGTGGACTTACTGGTTTATATCTGTCTGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp AAAGTGAAAACAGGTTTACTGGTTCTAACTCAGGATGTTCTGGGCATCAACAAGACCTCAATAATATCATaGATGCGAGTAACGATCCAA +
Preference number: 5 (lower is better)
Translates to: KVKTGLLVLTQDVLGINKTSIIS*MRVTIQ
Trigger: TTGGATCGTTACTCGCATCAATGATATTATTGAGGT...CTTGTTGATGCCCAGAACATCCTGAGTTAGAACCAGTAAACCTGTTTTCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583621.1
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTGAAAAATGGGCGTGTTaGCCCAATTTACTGTTAAGT +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLEKWAC*PNLLLS
Trigger: ACTTAACAGTAAATTGGGCAAACACGCCCATTTTTC...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCGTAATATGGTTCCTTaGATGCAAGGTTGTCTACTA +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLRNMVP*MQGCLL
Trigger: TAGTAGACAACCTTGCATCAAAGGAACCATATTACG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCGTTCAATTAGTTTCTaGACAGCCTCTTTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLRSISF*TASLSE
Trigger: TTCAGACAAAGAGGCTGTCAAGAAACTAATTGAACG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTACAATGAGGTCTTTGTaGTCTTTCGTATGGAACACT +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLTMRSL*SFVWNT
Trigger: AGTGTTCCATACGAAAGACAACAAAGACCTCATTGT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTCTTTATACTGCTCAATaGTGTCTCTTCCATAGATGT +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLLYTAQ*CLFHRC
Trigger: ACATCTATGGAAGAGACACAATTGAGCAGTATAAAG...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTATGATAGATACTACTTaGCCATTCTCAATAAGAGGC +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLMIDTT*PFSIRG
Trigger: GCCTCTTATTGAGAATGGCAAAGTAGTATCTATCAT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS-3UTR CAA 90 bp CTTCATCTCAGTTTGCCATGTAATCTTGGGCCTGTTTATGTAGAATCTATGCTTAGGACATTCATGTATTaGTCCTTCCGTTTCAATTCA +
Preference number: 5 (lower is better)
Translates to: LHLSLPCNLGPVYVESMLRTFMY*SFRFNS
Trigger: TGAATTGAAACGGAAGGACAAATACATGAATGTCCT...AAGCATAGATTCTACATAAACAGGCCCAAGATTACATGGCAAACTGAGATGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579584.5
CDS GCA 72 bp AGCACGAAGTCTGCCTTGCCGAATTCCAGGCTCTCCTaGTCCGCCATGGCGCCAGCGCGGGGGCTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: STKSALPNSRLS*SAMAPARGLRW
Trigger: CCACCTGAGCCCCCGCGCTGGCGCCATGGCGGAGCAGGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000579584.5
ENST00000583621.1
CDS CAA 90 bp GGGCGTCAGTTCCCGGGCACGCTGAGGATGAAGCCCGAGCGATTCTaGGTGAAGTCGGGCTGGGGCTGGTTGAGCCGCGTCTCCACGGAG +
Preference number: 6 (lower is better)
Translates to: GRQFPGTLRMKPERF*VKSGWGWLSRVSTE
Trigger: CTCCGTGGAGACGCGGCTCAACCAGCCCCAGCCCGACTTCACCAAGAATCGCTCGGGCTTCATCCTCAGCGTGCCCGGGAACTGACGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000577576.1
CDS GCA 72 bp CCTCTCGTGTTCAGACAATCGGGGCATGCTCCTCCGTaGAGGGCTCTCCTGACTCCCGCTCAGCAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: PLVFRQSGHAPP*RALLTPAQQGG
Trigger: GCCACCCTGCTGAGCGGGAGTCAGGAGAGCCCTGCACGGAGGAGCATGCCCCGATTGTCTGAACACGAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577576.1
CDS CAA 72 bp TTCCCGGGCACGCTGAGGATGAAGCCCGAGCGATTCTaGGTGAAGTCGGGCTGGGGCTGGTTGAGCCGCGTC +
Preference number: 6 (lower is better)
Translates to: FPGTLRMKPERF*VKSGWGWLSRV
Trigger: GACGCGGCTCAACCAGCCCCAGCCCGACTTCACCAAGAATCGCTCGGGCTTCATCCTCAGCGTGCCCGGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000577576.1
CDS CCA 72 bp AAGCCCGAGCGATTCTTGGTGAAGTCGGGCTGGGGCTaGTTGAGCCGCGTCTCCACGGAGACGGTGCACTTC +
Preference number: 6 (lower is better)
Translates to: KPERFLVKSGWG*LSRVSTETVHF
Trigger: GAAGTGCACCGTCTCCGTGGAGACGCGGCTCAACCAGCCCCAGCCCGACTTCACCAAGAATCGCTCGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000577576.1
CDS CCA 72 bp AGGATGAAGCCCGAGCGATTCTTGGTGAAGTCGGGCTaGGGCTGGTTGAGCCGCGTCTCCACGGAGACGGTG +
Preference number: 6 (lower is better)
Translates to: RMKPERFLVKSG*GWLSRVSTETV
Trigger: CACCGTCTCCGTGGAGACGCGGCTCAACCAGCCCCAGCCCGACTTCACCAAGAATCGCTCGGGCTTCATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000577576.1
CDS CAA 90 bp ATGAACTCGGGCATGGAGACGGTGTCCATCAGCACGAAGTCTGCCTaGCCGAATTCCAGGCTCTCCTGCTCCGCCATGGCGCCAGCGCGG +
Preference number: 6 (lower is better)
Translates to: MNSGMETVSISTKSA*PNSRLSCSAMAPAR
Trigger: CCGCGCTGGCGCCATGGCGGAGCAGGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCTGATGGACACCGTCTCCATGCCCGAGTTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000579584.5
ENST00000583621.1
CDS CAA 90 bp AGGATGAAGCCCGAGCGATTCTTGGTGAAGTCGGGCTGGGGCTGGTaGAGCCGCGTCTCCACGGAGACGGTGCACTTCTTCCCGTGCAGG +
Preference number: 6 (lower is better)
Translates to: RMKPERFLVKSGWGW*SRVSTETVHFFPCR
Trigger: CCTGCACGGGAAGAAGTGCACCGTCTCCGTGGAGACGCGGCTCAACCAGCCCCAGCCCGACTTCACCAAGAATCGCTCGGGCTTCATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000577576.1
CDS GCA 72 bp GCATGGAGACGGTGTCCATCAGCACGAAGTCTGCCTTaGCGAATTCCAGGCTCTCCTGCTCCGCCATGGCGC +
Preference number: 6 (lower is better)
Translates to: AWRRCPSARSLP*RIPGSPAPPWR
Trigger: GCGCCATGGCGGAGCAGGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCTGATGGACACCGTCTCCATGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000579584.5
ENST00000583621.1
CDS CAA 72 bp GGCATGGAGACGGTGTCCATCAGCACGAAGTCTGCCTaGCCGAATTCCAGGCTCTCCTGCTCCGCCATGGCG +
Preference number: 6 (lower is better)
Translates to: GMETVSISTKSA*PNSRLSCSAMA
Trigger: CGCCATGGCGGAGCAGGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCTGATGGACACCGTCTCCATGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000579584.5
ENST00000583621.1
CDS CAA 72 bp GCCCTCCCAGGCCCTCTGGAGCCCGAGGTCAGCCCTTaGACCCTTCAACATTTCCACGGCTGCAACCTTTGC +
Preference number: 6 (lower is better)
Translates to: ALPGPLEPEVSP*TLQHFHGCNLC
Trigger: GCAAAGGTTGCAGCCGTGGAAATGTTGAAGGGTCAAAGGGCTGACCTCGGGCTCCAGAGGGCCTGGGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
CDS GCA 72 bp CTCGGGCATGGAGACGGTGTCCATCAGCACGAAGTCTaGCTTGCCGAATTCCAGGCTCTCCTGCTCCGCCAT +
Preference number: 6 (lower is better)
Translates to: LGHGDGVHQHEV*LAEFQALLLRH
Trigger: ATGGCGGAGCAGGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCTGATGGACACCGTCTCCATGCCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000579584.5
ENST00000583621.1
CDS GCA 72 bp AGCCGCGTCTCCACGGAGACGGTGCACTTCTTCCCGTaGAGGCTGCACTGTACTGGGTTGGTGACGTTCACT +
Preference number: 6 (lower is better)
Translates to: SRVSTETVHFFP*RLHCTGLVTFT
Trigger: AGTGAACGTCACCAACCCAGTACAGTGCAGCCTGCACGGGAAGAAGTGCACCGTCTCCGTGGAGACGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000577576.1
CDS TCA 72 bp GCCACTTCACGTGCTTCCCGTAGTCTCGCATGGTCTTaGCGCCATGGAAGCGTCTGGCCACCTCGTGGATGT +
Preference number: 6 (lower is better)
Translates to: ATSRASRSLAWS*RHGSVWPPRGC
Trigger: ACATCCACGAGGTGGCCAGACGCTTCCATGGCGTCAAGACCATGCGAGACTACGGGAAGCACGTGAAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
ENST00000585094.1
CDS CAA 90 bp AAGATAGTTGCCCTCCCAGGCCCTCTGGAGCCCGAGGTCAGCCCTTaGACCCTTCAACATTTCCACGGCTGCAACCTTTGCCCTGACCTG +
Preference number: 6 (lower is better)
Translates to: KIVALPGPLEPEVSP*TLQHFHGCNLCPDL
Trigger: CAGGTCAGGGCAAAGGTTGCAGCCGTGGAAATGTTGAAGGGTCAAAGGGCTGACCTCGGGCTCCAGAGGGCCTGGGAGGGCAACTATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
CDS CCA 72 bp GACGGTGCACTTCTTCCCGTGCAGGCTGCACTGTACTaGGTTGGTGACGTTCACTTGAAGGTGGCGCTTCTC +
Preference number: 6 (lower is better)
Translates to: DGALLPVQAALY*VGDVHLKVALL
Trigger: GAGAAGCGCCACCTTCAAGTGAACGTCACCAACCCAGTACAGTGCAGCCTGCACGGGAAGAAGTGCACCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000577576.1
CDS GCA 72 bp CTGCCTTGGTTCTTTTGTACCGCATGCGGGCCAGGGTaGCCCGCCACACCTCAGATGGAAATGCAGAAATCA +
Preference number: 6 (lower is better)
Translates to: LPWFFCTACGPG*PATPQMEMQKS
Trigger: TGATTTCTGCATTTCCATCTGAGGTGTGGCGGGGCACCCTGGCCCGCATGCGGTACAAAAGAACCAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582217.1
CDS CCA 72 bp GGCCTCCTCAAAACGGCGAAGAACTTTAGGAGGGCTTaGCCACTTCACGTGCTTCCCGTAGTCTCGCATGGT +
Preference number: 6 (lower is better)
Translates to: GLLKTAKNFRRA*PLHVLPVVSHG
Trigger: ACCATGCGAGACTACGGGAAGCACGTGAAGTGGCCAAGCCCTCCTAAAGTTCTTCGCCGTTTTGAGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
ENST00000585094.1
CDS CCA 72 bp TTCAACATTTCCACGGCTGCAACCTTTGCCCTGACCTaGGGCAGGTCTGAGGCCGGAATGCTCTTGATGAGC +
Preference number: 6 (lower is better)
Translates to: FNISTAATFALT*GRSEAGMLLMS
Trigger: GCTCATCAAGAGCATTCCGGCCTCAGACCTGCCCCAGGTCAGGGCAAAGGTTGCAGCCGTGGAAATGTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
CDS CCA 72 bp GTGAGGCTGGGCACTGTTCCCTCTGGTCCTCTTAGCTaGTTCTTGCCTCAGCCTTGGGAAGTTTTGAGCCCT +
Preference number: 6 (lower is better)
Translates to: VRLGTVPSGPLS*FLPQPWEVLSP
Trigger: AGGGCTCAAAACTTCCCAAGGCTGAGGCAAGAACCAGCTAAGAGGACCAGAGGGAACAGTGCCCAGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580547.1
CDS GCA 72 bp ACACCTCAGATGGAAATGCAGAAATCACCCGTGTTCTaGGTAGCTCACGCTGGGAGCTGTAGACCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: TPQMEMQKSPVF*VAHAGSCRPEL
Trigger: CAGCTCCGGTCTACAGCTCCCAGCGTGAGCTACGCAGAACACGGGTGATTTCTGCATTTCCATCTGAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582217.1
CDS CAA 72 bp GTGCAGGCTGCACTGTACTGGGTTGGTGACGTTCACTaGAAGGTGGCGCTTCTCACCTCTCGTGTTCAGACA +
Preference number: 6 (lower is better)
Translates to: VQAALYWVGDVH*KVALLTSRVQT
Trigger: TGTCTGAACACGAGAGGTGAGAAGCGCCACCTTCAAGTGAACGTCACCAACCCAGTACAGTGCAGCCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577576.1
CDS CAA 72 bp CTGGGCACTGTTCCCTCTGGTCCTCTTAGCTGGTTCTaGCCTCAGCCTTGGGAAGTTTTGAGCCCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: LGTVPSGPLSWF*PQPWEVLSPFL
Trigger: GAGGAAAGGGCTCAAAACTTCCCAAGGCTGAGGCAAGAACCAGCTAAGAGGACCAGAGGGAACAGTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580547.1
CDS CAA 90 bp TTTGTGAGGCTGGGCACTGTTCCCTCTGGTCCTCTTAGCTGGTTCTaGCCTCAGCCTTGGGAAGTTTTGAGCCCTTTCCTCCCAACTGCT +
Preference number: 6 (lower is better)
Translates to: FVRLGTVPSGPLSWF*PQPWEVLSPFLPTA
Trigger: AGCAGTTGGGAGGAAAGGGCTCAAAACTTCCCAAGGCTGAGGCAAGAACCAGCTAAGAGGACCAGAGGGAACAGTGCCCAGCCTCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580547.1
CDS TCA 72 bp TGCAGGCTGCACTGTACTGGGTTGGTGACGTTCACTTaGAGGTGGCGCTTCTCACCTCTCGTGTTCAGACAA +
Preference number: 6 (lower is better)
Translates to: CRLHCTGLVTFT*RWRFSPLVFRQ
Trigger: TTGTCTGAACACGAGAGGTGAGAAGCGCCACCTTCAAGTGAACGTCACCAACCCAGTACAGTGCAGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577576.1
CDS GCA 72 bp TTTGTAGCGCCGGTAGTACCTGATTATTGTCAGAGCTaGCTTGGTTCTTTTGTACCGCATGCGGGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: FVAPVVPDYCQS*LGSFVPHAGQG
Trigger: ACCCTGGCCCGCATGCGGTACAAAAGAACCAAGGCAGCTCTGACAATAATCAGGTACTACCGGCGCTACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
ENST00000585094.1
CDS CAA 72 bp GTGCAGGCTGCACTGTACTGGGTTGGTGACGTTCACTaGAAGGTGGCGCTTCTCACTCTTGAAATGATTCAC +
Preference number: 6 (lower is better)
Translates to: VQAALYWVGDVH*KVALLTLEMIH
Trigger: GTGAATCATTTCAAGAGTGAGAAGCGCCACCTTCAAGTGAACGTCACCAACCCAGTACAGTGCAGCCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
CDS TCA 72 bp AATGGATGCAGCACACAGCAGCACGTTCTTACCTATTaGAAATCGTCTGCAGGGCCTCCTCAAAACGGCGAA +
Preference number: 6 (lower is better)
Translates to: NGCSTQQHVLTY*KSSAGPPQNGE
Trigger: TTCGCCGTTTTGAGGAGGCCCTGCAGACGATTTTCAATAGGTAAGAACGTGCTGCTGTGTGCTGCATCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585094.1
CDS CCA 72 bp ACCAGCACTCCAACAAGTTCTCCAATTCGACTCTCATaGGTTGGCTGTTTGCTGAAGAGGCAGACAATGAGG +
Preference number: 6 (lower is better)
Translates to: TSTPTSSPIRLS*VGCLLKRQTMR
Trigger: CCTCATTGTCTGCCTCTTCAGCAAACAGCCAACCCATGAGAGTCGAATTGGAGAACTTGTTGGAGTGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS CAA 72 bp AAATGGATGCAGCACACAGCAGCACGTTCTTACCTATaGAAAATCGTCTGCAGGGCCTCCTCAAAACGGCGA +
Preference number: 6 (lower is better)
Translates to: KWMQHTAARSYL*KIVCRASSKRR
Trigger: TCGCCGTTTTGAGGAGGCCCTGCAGACGATTTTCAATAGGTAAGAACGTGCTGCTGTGTGCTGCATCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585094.1
CDS GCA 72 bp ATGAGCTGGGATGCTCTCCATCTATTGAAAATCGTCTaGAGGGCCTCCTCAAAACGGCGAAGAACTTTAGGA +
Preference number: 6 (lower is better)
Translates to: MSWDALHLLKIV*RASSKRRRTLG
Trigger: TCCTAAAGTTCTTCGCCGTTTTGAGGAGGCCCTGCAGACGATTTTCAATAGATGGAGAGCATCCCAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
CDS GCA 72 bp CACACAGCAGCACGTTCTTACCTATTGAAAATCGTCTaGAGGGCCTCCTCAAAACGGCGAAGAACTTTAGGA +
Preference number: 6 (lower is better)
Translates to: HTAARSYLLKIV*RASSKRRRTLG
Trigger: TCCTAAAGTTCTTCGCCGTTTTGAGGAGGCCCTGCAGACGATTTTCAATAGGTAAGAACGTGCTGCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585094.1
CDS CAA 90 bp TGCCACCATAAATGGATGCAGCACACAGCAGCACGTTCTTACCTATaGAAAATCGTCTGCAGGGCCTCCTCAAAACGGCGAAGAACTTTA +
Preference number: 6 (lower is better)
Translates to: CHHKWMQHTAARSYL*KIVCRASSKRRRTL
Trigger: TAAAGTTCTTCGCCGTTTTGAGGAGGCCCTGCAGACGATTTTCAATAGGTAAGAACGTGCTGCTGTGTGCTGCATCCATTTATGGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585094.1
CDS CAA 90 bp GGTGAGGCGGTCTCTCATACAGCTCACGGCCTTTATACTGCTCAATaGTGTCTCTTCCATAGATGTTCAACAACTTGTAAGGGTTCACAG +
Preference number: 6 (lower is better)
Translates to: GEAVSHTAHGLYTAQ*CLFHRCSTTCKGSQ
Trigger: CTGTGAACCCTTACAAGTTGTTGAACATCTATGGAAGAGACACAATTGAGCAGTATAAAGGCCGTGAGCTGTATGAGAGACCGCCTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000583621.1
CDS TCA 72 bp TGCCGACATTCATGCAAGCATCATCAAGGATTGCAATaGTCCCTTTGTGCTGTTGCTCCACGAGGTCAACAA +
Preference number: 6 (lower is better)
Translates to: CRHSCKHHQGLQ*SLCAVAPRGQQ
Trigger: TTGTTGACCTCGTGGAGCAACAGCACAAAGGGATCATTGCAATCCTTGATGATGCTTGCATGAATGTCGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000580538.5
ENST00000582751.1
ENST00000584232.5
CDS TCA 72 bp GGATGTACGACTTCACTTTGTAGCGCCGGTAGTACCTaGTTATTGTCAGAGCTGCCTTGGTTCTTTTGTACC +
Preference number: 6 (lower is better)
Translates to: GCTTSLCSAGST*LLSELPWFFCT
Trigger: GGTACAAAAGAACCAAGGCAGCTCTGACAATAATCAGGTACTACCGGCGCTACAAAGTGAAGTCGTACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
ENST00000581059.5
ENST00000582217.1
ENST00000585094.1
CDS CCA 72 bp CACTCCAACAAGTTCTCCAATTCGACTCTCATGGGTTaGCTGTTTGCTGAAGAGGCAGACAATGAGGTCTTT +
Preference number: 6 (lower is better)
Translates to: HSNKFSNSTLMG*LFAEEADNEVF
Trigger: AAAGACCTCATTGTCTGCCTCTTCAGCAAACAGCCAACCCATGAGAGTCGAATTGGAGAACTTGTTGGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS CAA 72 bp AGAAACAGCATGCTAGTAGCTTATCTTAACTATGGCTaGTGTCCAGGGGTTGTGGCACATTGCTGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: RNSMLVAYLNYG*CPGVVAHCCQL
Trigger: CAGCTGACAGCAATGTGCCACAACCCCTGGACACAAGCCATAGTTAAGATAAGCTACTAGCATGCTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623444.1
CDS TCA 72 bp AGCAACATATTCTTCACTCTTTCAACCTCTGCTCTCTaGCTGGGGTTGGTGATGGCCGCAATATACTGCATA +
Preference number: 6 (lower is better)
Translates to: SNIFFTLSTSAL*LGLVMAAIYCI
Trigger: TATGCAGTATATTGCGGCCATCACCAACCCCAGTCAGAGAGCAGAGGTTGAAAGAGTGAAGAATATGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000583621.1
CDS CAA 72 bp TTCTTGACAGCCTCTTTGTCTGAAGGAAGGTCATGGTaGGGCCAGGTGAATTCAGAGATCATCTTATACCTG +
Preference number: 6 (lower is better)
Translates to: FLTASLSEGRSW*GQVNSEIILYL
Trigger: CAGGTATAAGATGATCTCTGAATTCACCTGGCCCAACCATGACCTTCCTTCAGACAAAGAGGCTGTCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000585094.1
CDS CAA 90 bp AAAGTAAGTAGAAACAGCATGCTAGTAGCTTATCTTAACTATGGCTaGTGTCCAGGGGTTGTGGCACATTGCTGTCAGCTGCTACAGGAA +
Preference number: 6 (lower is better)
Translates to: KVSRNSMLVAYLNYG*CPGVVAHCCQLLQE
Trigger: TTCCTGTAGCAGCTGACAGCAATGTGCCACAACCCCTGGACACAAGCCATAGTTAAGATAAGCTACTAGCATGCTGTTTCTACTTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623444.1
CDS TCA 72 bp CATCATCCTGAAAACCACACCGTTCAATTAGTTTCTTaGCAGCCTCTTTGTCTGAAGGAAGGTCATGGTTGG +
Preference number: 6 (lower is better)
Translates to: HHPENHTVQLVS*QPLCLKEGHGW
Trigger: CCAACCATGACCTTCCTTCAGACAAAGAGGCTGTCAAGAAACTAATTGAACGGTGTGGTTTTCAGGATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000585094.1
CDS CCA 72 bp AGTTTCTTGACAGCCTCTTTGTCTGAAGGAAGGTCATaGTTGGGCCAGGTGAATTCAGAGATCATCTTATAC +
Preference number: 6 (lower is better)
Translates to: SFLTASLSEGRS*LGQVNSEIILY
Trigger: GTATAAGATGATCTCTGAATTCACCTGGCCCAACCATGACCTTCCTTCAGACAAAGAGGCTGTCAAGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000585094.1
CDS CCA 72 bp ACCTTTTGTAGAAAGAGGACAATCCTTATGAGCATCTaGGCACGGAGTTCTTCCAAGGTAAACAATGTTCGG +
Preference number: 6 (lower is better)
Translates to: TFCRKRTILMSI*ARSSSKVNNVR
Trigger: CCGAACATTGTTTACCTTGGAAGAACTCCGTGCCCAGATGCTCATAAGGATTGTCCTCTTTCTACAAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000585094.1
CDS CAA 72 bp GAGGCACAGAGCTTTCGGCTGGAAAAATGGGCGTGTTaGCCCAATTTACTGTTAAGTGCTTCAAGAAACATT +
Preference number: 6 (lower is better)
Translates to: EAQSFRLEKWAC*PNLLLSASRNI
Trigger: AATGTTTCTTGAAGCACTTAACAGTAAATTGGGCAAACACGCCCATTTTTCCAGCCGAAAGCTCTGTGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000580538.5
ENST00000582751.1
ENST00000584232.5
CDS CAA 72 bp GAGGTCTTTGTTGTCTTTCGTATGGAACACTACAAGTaGGTCCTTTCCATTGGAGACACTCAGACCAGTCAA +
Preference number: 6 (lower is better)
Translates to: EVFVVFRMEHYK*VLSIGDTQTSQ
Trigger: TTGACTGGTCTGAGTGTCTCCAATGGAAAGGACCAACTTGTAGTGTTCCATACGAAAGACAACAAAGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS CAA 72 bp GGCTGTTTGCTGAAGAGGCAGACAATGAGGTCTTTGTaGTCTTTCGTATGGAACACTACAAGTTGGTCCTTT +
Preference number: 6 (lower is better)
Translates to: GCLLKRQTMRSL*SFVWNTTSWSF
Trigger: AAAGGACCAACTTGTAGTGTTCCATACGAAAGACAACAAAGACCTCATTGTCTGCCTCTTCAGCAAACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS CAA 90 bp ATTTTGTCTGAGGCACAGAGCTTTCGGCTGGAAAAATGGGCGTGTTaGCCCAATTTACTGTTAAGTGCTTCAAGAAACATTTCATCGGTG +
Preference number: 6 (lower is better)
Translates to: ILSEAQSFRLEKWAC*PNLLLSASRNISSV
Trigger: CACCGATGAAATGTTTCTTGAAGCACTTAACAGTAAATTGGGCAAACACGCCCATTTTTCCAGCCGAAAGCTCTGTGCCTCAGACAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000580538.5
ENST00000582751.1
ENST00000584232.5
CDS TCA 72 bp ACCTTGTACTGTTTAGTGGGATCCATTTTATACAGGTaGCGGTCAGTGACAAAAATTGCTCTGTCTTCCACC +
Preference number: 6 (lower is better)
Translates to: TLYCLVGSILYR*RSVTKIALSST
Trigger: GGTGGAAGACAGAGCAATTTTTGTCACTGACCGTCACCTGTATAAAATGGATCCCACTAAACAGTACAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS TCA 72 bp AGATGCGCCCTTTTTCAAATCTTGCCAGTTCTTAGATaGGAATCTCTCCCAAGGGTGAAAGCATCTTGTTTC +
Preference number: 6 (lower is better)
Translates to: RCALFQILPVLR*ESLPRVKASCF
Trigger: GAAACAAGATGCTTTCACCCTTGGGAGAGATTCTCATCTAAGAACTGGCAAGATTTGAAAAAGGGCGCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS TCA 72 bp ACTTGTAAGGGTTCACAGAAACGACGACTTCTCCAATaGACGTATAGATGCGCCCTTTTTCAAATCTTGCCA +
Preference number: 6 (lower is better)
Translates to: TCKGSQKRRLLQ*TYRCALFQILP
Trigger: TGGCAAGATTTGAAAAAGGGCGCATCTATACGTTCATTGGAGAAGTCGTCGTTTCTGTGAACCCTTACAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394649.8
CDS CCA 72 bp CTTTCGTATGGAACACTACAAGTTGGTCCTTTCCATTaGAGACACTCAGACCAGTCAAATTGTATAGAGGGA +
Preference number: 6 (lower is better)
Translates to: LSYGTLQVGPFH*RHSDQSNCIEG
Trigger: TCCCTCTATACAATTTGACTGGTCTGAGTGTCTCCAATGGAAAGGACCAACTTGTAGTGTTCCATACGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS CCA 72 bp AGGTCTTTGTTGTCTTTCGTATGGAACACTACAAGTTaGTCCTTTCCATTGGAGACACTCAGACCAGTCAAA +
Preference number: 6 (lower is better)
Translates to: RSLLSFVWNTTS*SFPLETLRPVK
Trigger: TTTGACTGGTCTGAGTGTCTCCAATGGAAAGGACCAACTTGTAGTGTTCCATACGAAAGACAACAAAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS CCA 72 bp AAGAGGCAGACAATGAGGTCTTTGTTGTCTTTCGTATaGAACACTACAAGTTGGTCCTTTCCATTGGAGACA +
Preference number: 6 (lower is better)
Translates to: KRQTMRSLLSFV*NTTSWSFPLET
Trigger: TGTCTCCAATGGAAAGGACCAACTTGTAGTGTTCCATACGAAAGACAACAAAGACCTCATTGTCTGCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS CAA 72 bp AGCATCATCAAGGATTGCAATGATCCCTTTGTGCTGTaGCTCCACGAGGTCAACAATGATCTGATTGTTGAA +
Preference number: 6 (lower is better)
Translates to: SIIKDCNDPFVL*LHEVNNDLIVE
Trigger: TTCAACAATCAGATCATTGTTGACCTCGTGGAGCAACAGCACAAAGGGATCATTGCAATCCTTGATGATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000580538.5
ENST00000582751.1
ENST00000584232.5
CDS CAA 72 bp TGTCGAATTCGAAAATCTCGATCAAACTCCAGAATTTaGTCTGAGGCACAGAGCTTTCGGCTGGAAAAATGG +
Preference number: 6 (lower is better)
Translates to: CRIRKSRSNSRI*SEAQSFRLEKW
Trigger: CCATTTTTCCAGCCGAAAGCTCTGTGCCTCAGACAAAATTCTGGAGTTTGATCGAGATTTTCGAATTCGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577252.5
ENST00000579584.5
ENST00000580538.5
ENST00000582751.1
ENST00000584232.5
CDS CAA 72 bp TCTTTCGTATGGAACACTACAAGTTGGTCCTTTCCATaGGAGACACTCAGACCAGTCAAATTGTATAGAGGG +
Preference number: 6 (lower is better)
Translates to: SFVWNTTSWSFP*ETLRPVKLYRG
Trigger: CCCTCTATACAATTTGACTGGTCTGAGTGTCTCCAATGGAAAGGACCAACTTGTAGTGTTCCATACGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS CAA 72 bp GTCTCTCATACAGCTCACGGCCTTTATACTGCTCAATaGTGTCTCTTCCATAGATGTTCAACAACTTGTAAG +
Preference number: 6 (lower is better)
Translates to: VSHTAHGLYTAQ*CLFHRCSTTCK
Trigger: CTTACAAGTTGTTGAACATCTATGGAAGAGACACAATTGAGCAGTATAAAGGCCGTGAGCTGTATGAGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000583621.1
CDS CAA 72 bp GCCAAAATCTTATACACTGTTTGGATCTCCTCAGGTTaGAAGCCAATGACTTTCATGGCATCAGCAACAACT +
Preference number: 6 (lower is better)
Translates to: AKILYTVWISSG*KPMTFMASATT
Trigger: AGTTGTTGCTGATGCCATGAAAGTCATTGGCTTCAAACCTGAGGAGATCCAAACAGTGTATAAGATTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000583621.1
CDS CAA 72 bp CTGTTAAGTGCTTCAAGAAACATTTCATCGGTGACTTaGCCGACATTCATGCAAGCATCATCAAGGATTGCA +
Preference number: 6 (lower is better)
Translates to: LLSASRNISSVT*PTFMQASSRIA
Trigger: TGCAATCCTTGATGATGCTTGCATGAATGTCGGCAAAGTCACCGATGAAATGTTTCTTGAAGCACTTAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000580538.5
ENST00000582751.1
ENST00000584232.5
CDS CAA 90 bp AGAATAGCAGCCAAAATCTTATACACTGTTTGGATCTCCTCAGGTTaGAAGCCAATGACTTTCATGGCATCAGCAACAACTCTGAATTCG +
Preference number: 6 (lower is better)
Translates to: RIAAKILYTVWISSG*KPMTFMASATTLNS
Trigger: CGAATTCAGAGTTGTTGCTGATGCCATGAAAGTCATTGGCTTCAAACCTGAGGAGATCCAAACAGTGTATAAGATTTTGGCTGCTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000583621.1
CDS CAA 90 bp ATTCATGCAAGCATCATCAAGGATTGCAATGATCCCTTTGTGCTGTaGCTCCACGAGGTCAACAATGATCTGATTGTTGAAGTAGTCAAT +
Preference number: 6 (lower is better)
Translates to: IHASIIKDCNDPFVL*LHEVNNDLIVEVVN
Trigger: ATTGACTACTTCAACAATCAGATCATTGTTGACCTCGTGGAGCAACAGCACAAAGGGATCATTGCAATCCTTGATGATGCTTGCATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000580538.5
ENST00000582751.1
ENST00000584232.5
CDS CAA 90 bp CCCAATTTACTGTTAAGTGCTTCAAGAAACATTTCATCGGTGACTTaGCCGACATTCATGCAAGCATCATCAAGGATTGCAATGATCCCT +
Preference number: 6 (lower is better)
Translates to: PNLLLSASRNISSVT*PTFMQASSRIAMIP
Trigger: AGGGATCATTGCAATCCTTGATGATGCTTGCATGAATGTCGGCAAAGTCACCGATGAAATGTTTCTTGAAGCACTTAACAGTAAATTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000580538.5
ENST00000582751.1
ENST00000584232.5
CDS CAA 90 bp TCTTTGTTGTCTTTCGTATGGAACACTACAAGTTGGTCCTTTCCATaGGAGACACTCAGACCAGTCAAATTGTATAGAGGGATAGTCTTC +
Preference number: 6 (lower is better)
Translates to: SLLSFVWNTTSWSFP*ETLRPVKLYRGIVF
Trigger: GAAGACTATCCCTCTATACAATTTGACTGGTCTGAGTGTCTCCAATGGAAAGGACCAACTTGTAGTGTTCCATACGAAAGACAACAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS CAA 72 bp CAAGTGCAGAATAGCAGCCAAAATCTTATACACTGTTaGGATCTCCTCAGGTTTGAAGCCAATGACTTTCAT +
Preference number: 6 (lower is better)
Translates to: QVQNSSQNLIHC*DLLRFEANDFH
Trigger: ATGAAAGTCATTGGCTTCAAACCTGAGGAGATCCAAACAGTGTATAAGATTTTGGCTGCTATTCTGCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000583621.1
CDS CAA 72 bp TTAGTAGAGAGCAATTCTGCTATGATAGATACTACTTaGCCATTCTCAATAAGAGGCGTGTCACCATCTACT +
Preference number: 6 (lower is better)
Translates to: LVESNSAMIDTT*PFSIRGVSPST
Trigger: AGTAGATGGTGACACGCCTCTTATTGAGAATGGCAAAGTAGTATCTATCATAGCAGAATTGCTCTCTACTAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000583621.1
CDS GCA 72 bp ATCCATTTTATACAGGTGACGGTCAGTGACAAAAATTaGTCTGTCTTCCACCTTACTAAATCGATTTACCTT +
Preference number: 6 (lower is better)
Translates to: IHFIQVTVSDKN*SVFHLTKSIYL
Trigger: AAGGTAAATCGATTTAGTAAGGTGGAAGACAGAGCAATTTTTGTCACTGACCGTCACCTGTATAAAATGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000577352.5
ENST00000579584.5
CDS CAA 72 bp AACATGGTGAAACCCCATCTGTACTTTGATGCAAGGTaGTCTACTAGAGCAATCATAGAATTCTTAAACAAG +
Preference number: 6 (lower is better)
Translates to: NMVKPHLYFDAR*STRAIIEFLNK
Trigger: CTTGTTTAAGAATTCTATGATTGCTCTAGTAGACAACCTTGCATCAAAGTACAGATGGGGTTTCACCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583611.5
CDS CAA 90 bp ATATCTGTCTTAGTAGAGAGCAATTCTGCTATGATAGATACTACTTaGCCATTCTCAATAAGAGGCGTGTCACCATCTACTACAAATTTT +
Preference number: 6 (lower is better)
Translates to: ISVLVESNSAMIDTT*PFSIRGVSPSTTNF
Trigger: AAAATTTGTAGTAGATGGTGACACGCCTCTTATTGAGAATGGCAAAGTAGTATCTATCATAGCAGAATTGCTCTCTACTAAGACAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000583621.1
CDS GCA 72 bp CTTGTTATTCTAAGGTGCAGCAGAATTGAGAACCACTaGTTTGAAAGGATTAATGGATTTTCTAGTTTGAGT +
Preference number: 6 (lower is better)
Translates to: LVILRCSRIENH*FERINGFSSLS
Trigger: ACTCAAACTAGAAAATCCATTAATCCTTTCAAAGCAGTGGTTCTCAATTCTGCTGCACCTTAGAATAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623444.1
CDS GCA 72 bp TTTCTCAACCATATCTGTCTTAGTAGAGAGCAATTCTaGTATGATAGATACTACTTTGCCATTCTCAATAAG +
Preference number: 6 (lower is better)
Translates to: FLNHICLSREQF*YDRYYFAILNK
Trigger: CTTATTGAGAATGGCAAAGTAGTATCTATCATAGCAGAATTGCTCTCTACTAAGACAGATATGGTTGAGAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318217.10
ENST00000394649.8
ENST00000579584.5
ENST00000583621.1