RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO1B (Homo sapiens)

Ensembl gene IDs: ENSG00000128641

Ensembl transcript IDs: ENST00000304164.8, ENST00000339514.8, ENST00000392316.5, ENST00000392318.8, ENST00000418908.5, ENST00000420448.1, ENST00000427152.1, ENST00000438652.5, ENST00000451437.5, ENST00000461714.1, ENST00000471904.1, ENST00000490069.1, ENST00000494129.1, ENST00000634375.1

Found 453 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAACAGAAACCACATGTAGAGGGATTTAACCTGGTCATTCATTTCTaGCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGTTAAA +
Preference number: 1 (lower is better)
Translates to: KQKPHVEGFNLVIHF*PLLGPALLEAYIVK
Trigger: TTTAACAATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAGGTTAAATCCCTCTACATGTGGTTTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
3UTR-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCTGGTCATTCATTTCTaGCCCCTCTTAGGACCAGCC +
Preference number: 2 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCLVIHF*PLLGPA
Trigger: GGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
3UTR GCA 72 bp CCACATGTAGAGGGATTTAACCTGGTCATTCATTTCTaGCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTAT +
Preference number: 3 (lower is better)
Translates to: PHVEGFNLVIHF*PLLGPALLEAY
Trigger: ATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAGGTTAAATCCCTCTACATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTCCACGCGCCGCGGTTaGGGCTCCCGTGCGCACCCA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISTRRG*GSRAHP
Trigger: TGGGTGCGCACGGGAGCCTCAACCGCGGCGCGTGGA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCCGCCGCGGCTGTTCTaGCAAGGCTGTCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIPPRLF*QGCPAA
Trigger: AGCCGCGGGACAGCCTTGGCAGAACAGCCGCGGCGG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGTTCATAGGCCTGCCTaGAGGCGTAGCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIVHRPA*RRSLPS
Trigger: GGAGGGCAGGCTACGCCTTCAGGCAGGCCTATGAAC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCCTGAAGGCGTAGCCTaGCCTCCGCACTCGGACGTT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIPEGVA*PPHSDV
Trigger: AACGTCCGAGTGCGGAGGGCAGGCTACGCCTTCAGG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGGATGCCTTGAACTGTaGGCCTGCTGTAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIGCLEL*ACCRRP
Trigger: AGGCCTCCTACAGCAGGCTCACAGTTCAAGGCATCC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCTTCTGAGCCCTCTTTaGGGTGGACGGCGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILLSPL*GGRRRS
Trigger: GCTTCTTCGCCGTCCACCTCAAAGAGGGCTCAGAAG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTCCACGCGCCGCGGTTaGGGCTCCCGTGCGCACCCA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISTRRG*GSRAHP
Trigger: TGGGTGCGCACGGGAGCCTCAACCGCGGCGCGTGGA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCCGTGCGCACCCAGCTaGGGAGTGCTCAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIPCAPS*GVLSGG
Trigger: GCCGCCGCTGAGCACTCCGCAGCTGGGTGCGCACGG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGCAGAGACGTGTCATTaGGGAACCGAGAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIAETCH*GTESTC
Trigger: GCAAGTGCTCTCGGTTCCTCAATGACACGTCTCTGC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp TGTCAGGTACATGAGGTTGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCCTTCTGAGCCCTCTTTaGGGTGGACGGCGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CQVHEVGDLVSVIHCPFILLSPL*GGRRRS
Trigger: GCTTCTTCGCCGTCCACCTCAAAGAGGGCTCAGAAG...GATAAATGGGCAGTGAATGACACTGACCAAGTCTCCAACCTCATGTACCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCACCCAGCTGCGGAGTaGTCAGCGGCGGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIHPAAE*SAAAGG
Trigger: TCCTCCCGCCGCCGCTGAGCACTCCGCAGCTGGGTG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCGCGCGCTCTGGTACTaGCTCCACGCGCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCRALWY*LHAPRL
Trigger: CAACCGCGGCGCGTGGAGGCAGTACCAGAGCGCGCG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCGCGCGCTCTGGTACTaGCTCCACGCGCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIRALWY*LHAPRL
Trigger: CAACCGCGGCGCGTGGAGGCAGTACCAGAGCGCGCG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCCGCCGCGGCTGTTCTaGCAAGGCTGTCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCPPRLF*QGCPAA
Trigger: AGCCGCGGGACAGCCTTGGCAGAACAGCCGCGGCGG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGACTTGATGAGGGCATaGCTGGCCTTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIDLMRA*LAFHMA
Trigger: AGCCATGTGGAAGGCCAGCCATGCCCTCATCAAGTC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCACACCAGACCTGGCTaGTCCTTTCCAATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIHTRPG*SFPMRP
Trigger: TGGCCTCATTGGAAAGGACCAGCCAGGTCTGGTGTG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCCTCCACACCAGACCTaGCTGGTCCTTTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIPPHQT*LVLSNE
Trigger: CTCATTGGAAAGGACCAGCCAGGTCTGGTGTGGAGG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGAGCCCTCTTTGAGGTaGACGGCGAAGAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIEPSLR*TAKKPS
Trigger: TGATGGCTTCTTCGCCGTCCACCTCAAAGAGGGCTC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCTGCCACATAGGACATaGCAAGCTTACTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILPHRT*QAYWPL
Trigger: CAGAGGCCAGTAAGCTTGTCATGTCCTATGTGGCAG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTATCCTGAAGCAGCTGTaGGGCAGAGACGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIILKQL*GRDVSL
Trigger: CAATGACACGTCTCTGCCTCACAGCTGCTTCAGGAT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGAGGCCTTTTCAGGTTaGTCTTGGCGGGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIEAFSG*SWRDSL
Trigger: AAGGGAATCCCGCCAAGATCAACCTGAAAAGGCCTC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTATGCAGCAATGGTCGTaGCTGCTTCCTTACAGCGCT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIMQQWS*LLPYSA
Trigger: AGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCAT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCAGTTTCAACACTGCTaGCACCACCGCCAAGACAGA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIQFQHC*HHRQDR
Trigger: TCTGTCTTGGCGGTGGTGGCAGCAGTGTTGAAACTG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTTAGCAGGAAGTGTGTaGGGCATTTCCACCCCCGAT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILAGSV*GISTPD
Trigger: ATCGGGGGTGGAAATGCCGCACACACTTCCTGCTAA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGGTCCCATGCCAATATaGAGCAATGGTCGTGACTGC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIGPMPI*SNGRDC
Trigger: GCAGTCACGACCATTGCTGCATATTGGCATGGGACC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTATGACAGCAACTGCATaGTTACGCCTAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIMTATA*LRLASS
Trigger: GGAGGAGGCTAGGCGTAAGCATGCAGTTGCTGTCAT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304164.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCTGGTCATTCATTTCTaGCCCCTCTTAGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILVIHF*PLLGPA
Trigger: GGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCGGTTGAGGCTCCCGTaGGCACCCAGCTGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCRLRLP*APSCGV
Trigger: CACTCCGCAGCTGGGTGCGCACGGGAGCCTCAACCG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCGGTTGAGGCTCCCGTaGGCACCCAGCTGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIRLRLP*APSCGV
Trigger: CACTCCGCAGCTGGGTGCGCACGGGAGCCTCAACCG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAGTTCCCTTCGTGCCTaGGTCCCATGCCAATATGCA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISSLRA*VPCQYA
Trigger: TGCATATTGGCATGGGACCCAGGCACGAAGGGAACT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304164.8
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAAAGCCCCAGGTACCTaGTCTGATGACACACTAGAG +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIKAPGT*SDDTLE
Trigger: CTCTAGTGTGTCATCAGATCAGGTACCTGGGGCTTT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCCCCGATATATCTTCTaGATGAGAGTGGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIPRYIF*MRVAKS
Trigger: GGACTTGGCCACTCTCATTCAGAAGATATATCGGGG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTCCTTACAGCGCTTTTaGTGCTTCAGTTCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISLQRF*CFSSRR
Trigger: TCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCCAAATGACAGCAACTaGATGCTTACGCCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIPNDSN*MLTPSL
Trigger: GAGGCTAGGCGTAAGCATGCAGTTGCTGTCATTTGG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304164.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGCCCCTTGGAATGGTTaGCCAACACTAGATGGGTAT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIAPWNG*PTLDGY
Trigger: ATACCCATCTAGTGTTGGGCAACCATTCCAAGGGGC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTTTTCACCTCCATTTTaGCCATGGTCTCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIFSPPF*PWSPAR
Trigger: GCGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCCACTCCATTCACTTTaGCCGAATCCAGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIPLHSL*PNPDSG
Trigger: ACCTGAGTCTGGATTCGGCCAAAGTGAATGGAGTGG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCTGCTCTCAAAATGCTaGTGGGTGGCACATACTTGG +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILLSKC*WVAHTW
Trigger: CCAAGTATGTGCCACCCACCAGCATTTTGAGAGCAG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTACGAATCCTTCCACCTaGTACAGCACCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYITNPST*YSTFPA
Trigger: TGCTGGAAAGGTGCTGTACCAGGTGGAAGGATTCGT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGTTCATAGGCCTGCCTaGAGGCGTAGCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCVHRPA*RRSLPS
Trigger: GGAGGGCAGGCTACGCCTTCAGGCAGGCCTATGAAC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGTTCATAGGCCTGCCTaGAGGCGTAGCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIVHRPA*RRSLPS
Trigger: GGAGGGCAGGCTACGCCTTCAGGCAGGCCTATGAAC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTCTGTTTGGTTTGGCTaGGAGTTGTGCGATAGAGCT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISVWFG*ELCDRA
Trigger: AGCTCTATCGCACAACTCTCAGCCAAACCAAACAGA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGGCCTCTGTTTTTCCTaGTCCACTTTCCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIGLCFS*STFPSN
Trigger: ATTACTGGGGAAAGTGGAGCAGGAAAAACAGAGGCC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTATAAAGCCCACAATCTaGATGGCATTCCGCACGGTT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIIKPTI*MAFRTV
Trigger: AACCGTGCGGAATGCCATGCAGATTGTGGGCTTTAT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGGAACCGAGAGCACTTaGTCATCCTGCTCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIGTEST*SSCSQN
Trigger: ATTTTGAGAGCAGGATGAGCAAGTGCTCTCGGTTCC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCCTGAAGGCGTAGCCTaGCCTCCGCACTCGGACGTT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIPEGVA*PPHSDV
Trigger: AACGTCCGAGTGCGGAGGGCAGGCTACGCCTTCAGG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCCTGAAGGCGTAGCCTaGCCTCCGCACTCGGACGTT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCPEGVA*PPHSDV
Trigger: AACGTCCGAGTGCGGAGGGCAGGCTACGCCTTCAGG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAAGTCCTCCAGGCGTTaGTTCCTCAGGTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIKSSRR*FLRSSN
Trigger: ATTAGAAGACCTGAGGAAGCAACGCCTGGAGGACTT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGCGGAACTCTTTGTCTaGTGGTACCTCTTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIAELFV*WYLFCC
Trigger: GCAACAAAAGAGGTACCAGCAGACAAAGAGTTCCGC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAGCAATGGTCGTGACTaGTTCCTTACAGCGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISNGRD*FLTALL
Trigger: CAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCCTCCATTTTGGCCATaGTCTCCAGCTCGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIPPFWP*SPARRA
Trigger: CGCCCGGCGAGCTGGAGACCATGGCCAAAATGGAGG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304164.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCAAAATGCTGGTGGGTaGCACATACTTGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIQNAGG*HILGSA
Trigger: AGCTGAACCAAGTATGTGCCACCCACCAGCATTTTG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCTCTCAAAATGCTGGTaGGTGGCACATACTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILSKCW*VAHTWF
Trigger: GAACCAAGTATGTGCCACCCACCAGCATTTTGAGAG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTACAGACTCAGCTTCATaGTCCATAAAGCCCACAATC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYITDSAS*SIKPTI
Trigger: GATTGTGGGCTTTATGGATCATGAAGCTGAGTCTGT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCAACTGTTCGGAAACTaGATGCTCGTTCTAGAACTG +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIQLFGN*MLVLEL
Trigger: CAGTTCTAGAACGAGCATTCAGTTTCCGAACAGTTG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTACACTAGAGCCTCGTTaGAGATGTGTGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYITLEPR*RCVLLF
Trigger: AAAAAGCAGCACACATCTTCAACGAGGCTCTAGTGT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGCTGGTCCTTTCCAATaGGGCCATGTTTGTTTACAA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIAGPFQ*GHVCLQ
Trigger: TTGTAAACAAACATGGCCTCATTGGAAAGGACCAGC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGATATATCTTCTGAATaGGAGTGGCCAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIDISSE*EWPSPP
Trigger: TGGAGGACTTGGCCACTCTCATTCAGAAGATATATC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTAGGATGTCAGGTACATGAGGTTGGAGACTTGGTCAGTGTCATTCACTGCCCAATGGAACCTCTGACTTaGTTTGTCCAGACTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LGCQVHEVGDLVSVIHCPMEPLT*FVQTFG
Trigger: ACCAAAAGTCTGGACAAATCAAGTCAGAGGTTCCAT...TGGGCAGTGAATGACACTGACCAAGTCTCCAACCTCATGTACCTGACATCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTCAGGTGATCACTGCTaGAGAGAAAGTCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISGDHC*RESLLY
Trigger: GTAAAGGAGACTTTCTCTTCAGCAGTGATCACCTGA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTACTCTTCATCCAGCATaGCCAGGATTCCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYITLHPA*PGFHLC
Trigger: ACACAAATGGAATCCTGGCCATGCTGGATGAAGAGT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTAGGATGTCAGGTACATGAGGTTGGAGACTTGGTCAGTGTCATTCACTGCCCAAGCTCATTGATACCTTaGTCACATCCACCAATGGAA +
Preference number: 4 (lower is better)
Translates to: LGCQVHEVGDLVSVIHCPSSLIP*SHPPME
Trigger: TTCCATTGGTGGATGTGACCAAGGTATCAATGAGCT...TGGGCAGTGAATGACACTGACCAAGTCTCCAACCTCATGTACCTGACATCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTTGTGCGATAGAGCTTaGTGGCCATTTCAATCAGGT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILCDRA*WPFQSG
Trigger: ACCTGATTGAAATGGCCACCAAGCTCTATCGCACAA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCATTGGTCCTTATCTTaGTCTCGTAGGGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIHWSLS*SRRDLY
Trigger: ATACAGATCCCTACGAGATCAAGATAAGGACCAATG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCGTTCTAGAACTGATTaGTCAATGCCGGTCAATTCA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIRSRTD*SMPVNS
Trigger: TGAATTGACCGGCATTGATCAATCAGTTCTAGAACG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCACATTCAGTGTAGTTaGAACTTTCTCCTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIHIQCS*NFLLFG
Trigger: GCCAAACAGGAGAAAGTTTCAACTACACTGAATGTG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTCGATTTACCAACCATaGAAACAACCTGCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISIYQP*KQPAVE
Trigger: CTCTACAGCAGGTTGTTTTCATGGTTGGTAAATCGA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGGATGCCTTGAACTGTaGGCCTGCTGTAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCGCLEL*ACCRRP
Trigger: AGGCCTCCTACAGCAGGCTCACAGTTCAAGGCATCC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGTTTCTGCTGGTCTGTaGATTGGTCCCTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIVSAGL*IGPCIF
Trigger: AAAAATACAGGGACCAATTCACAGACCAGCAGAAAC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAAGCCTTCTTGTCTTTaGAGAGTTCACTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIKPSCL*RVHWLL
Trigger: TAGAAGCCAGTGAACTCTTCAAAGACAAGAAGGCTT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCTTCTGAGCCCTCTTTaGGGTGGACGGCGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILLSPL*GGRRRS
Trigger: GCTTCTTCGCCGTCCACCTCAAAGAGGGCTCAGAAG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCCCCAGTTTCAACACTaGTGCCACCACCGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIPQFQH*CHHRQD
Trigger: GTCTTGGCGGTGGTGGCAGCAGTGTTGAAACTGGGG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCCCCAGTTTCAACACTaGTGCCACCACCGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCPQFQH*CHHRQD
Trigger: GTCTTGGCGGTGGTGGCAGCAGTGTTGAAACTGGGG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGTGTATATTTCACTGTaGTCAAAGCGCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIVYISL*SKRFLR
Trigger: CCTCAAGAAGCGCTTTGACCACAGTGAAATATACAC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTCTCTGGTGAATAAATaGGTAAAGACCGGTATGGGT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISLVNK*VKTGMG
Trigger: ACCCATACCGGTCTTTACCCATTTATTCACCAGAGA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGTTTCTTTCACCTCTTaGCTGTTTAACAACCCGAGA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIVSFTS*LFNNPR
Trigger: TCTCGGGTTGTTAAACAGCCAAGAGGTGAAAGAAAC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTGGGTGGCACATACTTaGTTCAGCTTTTCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIWVAHT*FSFSKK
Trigger: CTTCTTAGAAAAGCTGAACCAAGTATGTGCCACCCA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAGCTCATTGATACCTTaGTCACATCCACCAATGGAA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISSLIP*SHPPME
Trigger: TTCCATTGGTGGATGTGACCAAGGTATCAATGAGCT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCATATTGTCCAGAAGTaGGGTTTTCACCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIHIVQK*GFHLHF
Trigger: AAAATGGAGGTGAAAACCTCACTTCTGGACAATATG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGCAGAGACGTGTCATTaGGGAACCGAGAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIAETCH*GTESTC
Trigger: GCAAGTGCTCTCGGTTCCTCAATGACACGTCTCTGC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGCAGAGACGTGTCATTaGGGAACCGAGAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCAETCH*GTESTC
Trigger: GCAAGTGCTCTCGGTTCCTCAATGACACGTCTCTGC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp TTGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCATGTGGAACAACTACTTCTGTTTGGTTTGGCTaGGAGTTGTGCGATAGAGCT +
Preference number: 4 (lower is better)
Translates to: LETWSVSFTAHLSCGTTTSVWFG*ELCDRA
Trigger: AGCTCTATCGCACAACTCTCAGCCAAACCAAACAGA...AGTAGTTGTTCCACATGATAAATGGGCAGTGAATGACACTGACCAAGTCTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGGTTCTAAAATTTGCTaGATCATCCACTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIGSKIC*IIHSIH
Trigger: GTGAATGGAGTGGATGATGCAGCAAATTTTAGAACC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCACGGTTCTAAAATTTaGTGCATCATCCACTCCATT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIHGSKI*CIIHSI
Trigger: AATGGAGTGGATGATGCAGCAAATTTTAGAACCGTG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCGTGCCTGGGTCCCATaGCAATATGCAGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCRAWVP*QYAAMV
Trigger: GACCATTGCTGCATATTGGCATGGGACCCAGGCACG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304164.8
ENST00000392318.8
CDS-3UTR GCA 90 bp CATTCACTGCCCATTTATCATGTGGAACAACTACTAGACACATACCTGGTACTTGCCCCTTGGAATGGTTaGCCAACACTAGATGGGTAT +
Preference number: 4 (lower is better)
Translates to: HSLPIYHVEQLLDTYLVLAPWNG*PTLDGY
Trigger: ATACCCATCTAGTGTTGGGCAACCATTCCAAGGGGC...AAGTACCAGGTATGTGTCTAGTAGTTGTTCCACATGATAAATGGGCAGTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCGAGCCTGGGTCCCATaGCAATATGCAGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCRAWVP*QYAAMV
Trigger: GACCATTGCTGCATATTGGCATGGGACCCAGGCTCG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392316.5
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGACTTGATGAGGGCATaGCTGGCCTTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIDLMRA*LAFHMA
Trigger: AGCCATGTGGAAGGCCAGCCATGCCCTCATCAAGTC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGACTTGATGAGGGCATaGCTGGCCTTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCDLMRA*LAFHMA
Trigger: AGCCATGTGGAAGGCCAGCCATGCCCTCATCAAGTC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCACACCAGACCTGGCTaGTCCTTTCCAATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIHTRPG*SFPMRP
Trigger: TGGCCTCATTGGAAAGGACCAGCCAGGTCTGGTGTG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCCTCCACACCAGACCTaGCTGGTCCTTTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCPPHQT*LVLSNE
Trigger: CTCATTGGAAAGGACCAGCCAGGTCTGGTGTGGAGG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCCTCCACACCAGACCTaGCTGGTCCTTTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIPPHQT*LVLSNE
Trigger: CTCATTGGAAAGGACCAGCCAGGTCTGGTGTGGAGG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGAGCCCTCTTTGAGGTaGACGGCGAAGAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIEPSLR*TAKKPS
Trigger: TGATGGCTTCTTCGCCGTCCACCTCAAAGAGGGCTC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGAGCCCTCTTTGAGGTaGACGGCGAAGAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCEPSLR*TAKKPS
Trigger: TGATGGCTTCTTCGCCGTCCACCTCAAAGAGGGCTC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp TGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCATGTGGAACAACTACTAATGAGGTTGGAGACTTaGTCAGTGTCATTCACTGCC +
Preference number: 4 (lower is better)
Translates to: WRLGQCHSLPIYHVEQLLMRLET*SVSFTA
Trigger: GGCAGTGAATGACACTGACCAAGTCTCCAACCTCAT...TAGTAGTTGTTCCACATGATAAATGGGCAGTGAATGACACTGACCAAGTCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCTGCCACATAGGACATaGCAAGCTTACTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILPHRT*QAYWPL
Trigger: CAGAGGCCAGTAAGCTTGTCATGTCCTATGTGGCAG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCTGCCACATAGGACATaGCAAGCTTACTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCLPHRT*QAYWPL
Trigger: CAGAGGCCAGTAAGCTTGTCATGTCCTATGTGGCAG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTATCCTGAAGCAGCTGTaGGGCAGAGACGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCILKQL*GRDVSL
Trigger: CAATGACACGTCTCTGCCTCACAGCTGCTTCAGGAT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTATCCTGAAGCAGCTGTaGGGCAGAGACGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIILKQL*GRDVSL
Trigger: CAATGACACGTCTCTGCCTCACAGCTGCTTCAGGAT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCATAATGCTGGATCCTaGAGCAGCTGTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCHNAGS*SSCEAE
Trigger: CTCTGCCTCACAGCTGCTTCAGGATCCAGCATTATG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCATAATGCTGGATCCTaGAGCAGCTGTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIHNAGS*SSCEAE
Trigger: CTCTGCCTCACAGCTGCTTCAGGATCCAGCATTATG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGAGGCCTTTTCAGGTTaGTCTTGGCGGGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCEAFSG*SWRDSL
Trigger: AAGGGAATCCCGCCAAGATCAACCTGAAAAGGCCTC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGAGGCCTTTTCAGGTTaGTCTTGGCGGGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIEAFSG*SWRDSL
Trigger: AAGGGAATCCCGCCAAGATCAACCTGAAAAGGCCTC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTATGCAGCAATGGTCGTaGCTGCTTCCTTACAGCGCT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCMQQWS*LLPYSA
Trigger: AGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCAT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTATGCAGCAATGGTCGTaGCTGCTTCCTTACAGCGCT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIMQQWS*LLPYSA
Trigger: AGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCAT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCTTTTTAGCTCCTTGTaGGTAGAATCCAAGAATAAG +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILFSSL*VESKNK
Trigger: CTTATTCTTGGATTCTACTCACAAGGAGCTAAAAAG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GTGTCATTCACTGCCCATTTATCATGTGGAACAACTACTAGACACATACCTGGTCACCAATGGAACCTCTaGCTTGATTTGTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: VSFTAHLSCGTTTRHIPGHQWNL*LDLSRL
Trigger: AAGTCTGGACAAATCAAGTCAGAGGTTCCATTGGTG...ACCAGGTATGTGTCTAGTAGTTGTTCCACATGATAAATGGGCAGTGAATGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR TCA 90 bp GTGTCATTCACTGCCCATTTATCATGTGGAACAACTACTAGACACATACCTGGTTCAGGTGATCACTGCTaGAGAGAAAGTCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: VSFTAHLSCGTTTRHIPGSGDHC*RESLLY
Trigger: GTAAAGGAGACTTTCTCTTCAGCAGTGATCACCTGA...ACCAGGTATGTGTCTAGTAGTTGTTCCACATGATAAATGGGCAGTGAATGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTGTTTTACTGCTATCTaGATGGCTTTTAGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYICFTAI*MAFSPL
Trigger: TAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTACAAAAATACAGTTGTaGTTCAGGAAATGGCACCAA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYITKIQL*FRKWHQ
Trigger: TTGGTGCCATTTCCTGAATCACAACTGTATTTTTGT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAACTTGATTAACTTCTaGTCCTTTTCCACAAACAGC +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYINLINF*SFSTNS
Trigger: GCTGTTTGTGGAAAAGGAGCAGAAGTTAATCAAGTT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCAGTTTCAACACTGCTaGCACCACCGCCAAGACAGA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIQFQHC*HHRQDR
Trigger: TCTGTCTTGGCGGTGGTGGCAGCAGTGTTGAAACTG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCAGTTTCAACACTGCTaGCACCACCGCCAAGACAGA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCQFQHC*HHRQDR
Trigger: TCTGTCTTGGCGGTGGTGGCAGCAGTGTTGAAACTG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCGTATATACTCCTCCTaGTCTTCTTTAAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIRIYSS*SSLRVS
Trigger: ACTTACTCTTAAAGAAGAGCAGGAGGAGTATATACG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTTAGCAGGAAGTGTGTaGGGCATTTCCACCCCCGAT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCLAGSV*GISTPD
Trigger: ATCGGGGGTGGAAATGCCGCACACACTTCCTGCTAA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTAGCAGGAAGTGTGTaGGGCATTTCCACCCCCGAT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILAGSV*GISTPD
Trigger: ATCGGGGGTGGAAATGCCGCACACACTTCCTGCTAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGGTCCCATGCCAATATaGAGCAATGGTCGTGACTGC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCGPMPI*SNGRDC
Trigger: GCAGTCACGACCATTGCTGCATATTGGCATGGGACC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTATGACAGCAACTGCATaGTTACGCCTAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCMTATA*LRLASS
Trigger: GGAGGAGGCTAGGCGTAAGCATGCAGTTGCTGTCAT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304164.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTATGACAGCAACTGCATaGTTACGCCTAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIMTATA*LRLASS
Trigger: GGAGGAGGCTAGGCGTAAGCATGCAGTTGCTGTCAT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304164.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCTGGTCATTCATTTCTaGCCCCTCTTAGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILVIHF*PLLGPA
Trigger: GGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCGTACCTGGGTCCCATaGCAATATGCAGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIRTWVP*QYAAMV
Trigger: GACCATTGCTGCATATTGGCATGGGACCCAGGTACG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAGTTCCCTTCGTGCCTaGGTCCCATGCCAATATGCA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCSSLRA*VPCQYA
Trigger: TGCATATTGGCATGGGACCCAGGCACGAAGGGAACT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304164.8
ENST00000392318.8
CDS-3UTR CCA 90 bp TTTCATCATTTTATTTGTACATACTGGTCTCTTCCACTAGGATGTCAGGTACATGAGCCCTCTTTGAGGTaGACGGCGAAGAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: FHHFICTYWSLPLGCQVHEPSLR*TAKKPS
Trigger: TGATGGCTTCTTCGCCGTCCACCTCAAAGAGGGCTC...ATGTACCTGACATCCTAGTGGAAGAGACCAGTATGTACAAATAAAATGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCTCGAGATTCGGGCTTaGACTCAATGTTCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCLEIRA*TQCSPV
Trigger: AACTGGGGAACATTGAGTTCAAGCCCGAATCTCGAG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCTCGAGATTCGGGCTTaGACTCAATGTTCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILEIRA*TQCSPV
Trigger: AACTGGGGAACATTGAGTTCAAGCCCGAATCTCGAG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAAAGCCCCAGGTACCTaGTCTGATGACACACTAGAG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCKAPGT*SDDTLE
Trigger: CTCTAGTGTGTCATCAGATCAGGTACCTGGGGCTTT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCCCCGATATATCTTCTaGATGAGAGTGGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCPRYIF*MRVAKS
Trigger: GGACTTGGCCACTCTCATTCAGAAGATATATCGGGG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTCCTTACAGCGCTTTTaGTGCTTCAGTTCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCSLQRF*CFSSRR
Trigger: TCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTCCTTACAGCGCTTTTaGTGCTTCAGTTCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISLQRF*CFSSRR
Trigger: TCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp TTGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCATGTGGAACAACTACTGTTTCTGCTGGTCTGTaGATTGGTCCCTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: LETWSVSFTAHLSCGTTTVSAGL*IGPCIF
Trigger: AAAAATACAGGGACCAATTCACAGACCAGCAGAAAC...AGTAGTTGTTCCACATGATAAATGGGCAGTGAATGACACTGACCAAGTCTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCCAAATGACAGCAACTaGATGCTTACGCCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIPNDSN*MLTPSL
Trigger: GAGGCTAGGCGTAAGCATGCAGTTGCTGTCATTTGG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304164.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGCCCCTTGGAATGGTTaGCCAACACTAGATGGGTAT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCAPWNG*PTLDGY
Trigger: ATACCCATCTAGTGTTGGGCAACCATTCCAAGGGGC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTTTCACCTCCATTTTaGCCATGGTCTCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIFSPPF*PWSPAR
Trigger: GCGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCCACTCCATTCACTTTaGCCGAATCCAGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCPLHSL*PNPDSG
Trigger: ACCTGAGTCTGGATTCGGCCAAAGTGAATGGAGTGG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCCACTCCATTCACTTTaGCCGAATCCAGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIPLHSL*PNPDSG
Trigger: ACCTGAGTCTGGATTCGGCCAAAGTGAATGGAGTGG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCTGCTCTCAAAATGCTaGTGGGTGGCACATACTTGG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCLLSKC*WVAHTW
Trigger: CCAAGTATGTGCCACCCACCAGCATTTTGAGAGCAG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCTGCTCTCAAAATGCTaGTGGGTGGCACATACTTGG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILLSKC*WVAHTW
Trigger: CCAAGTATGTGCCACCCACCAGCATTTTGAGAGCAG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTACGAATCCTTCCACCTaGTACAGCACCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCTNPST*YSTFPA
Trigger: TGCTGGAAAGGTGCTGTACCAGGTGGAAGGATTCGT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTACGAATCCTTCCACCTaGTACAGCACCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTITNPST*YSTFPA
Trigger: TGCTGGAAAGGTGCTGTACCAGGTGGAAGGATTCGT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTATAGTTTGGGTTCTTaGTCTGTAGGTTTTTCATCA +
Preference number: 4 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIYSLGS*SVGFSS
Trigger: TGATGAAAAACCTACAGACCAAGAACCCAAACTATA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAATTCCCTTCGAGCCTaGGTCCCATGCCAATATGCA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCNSLRA*VPCQYA
Trigger: TGCATATTGGCATGGGACCCAGGCTCGAAGGGAATT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392316.5
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTCTGTTTGGTTTGGCTaGGAGTTGTGCGATAGAGCT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISVWFG*ELCDRA
Trigger: AGCTCTATCGCACAACTCTCAGCCAAACCAAACAGA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTCTGTTTGGTTTGGCTaGGAGTTGTGCGATAGAGCT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCSVWFG*ELCDRA
Trigger: AGCTCTATCGCACAACTCTCAGCCAAACCAAACAGA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGGCCTCTGTTTTTCCTaGTCCACTTTCCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIGLCFS*STFPSN
Trigger: ATTACTGGGGAAAGTGGAGCAGGAAAAACAGAGGCC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGGCCTCTGTTTTTCCTaGTCCACTTTCCCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCGLCFS*STFPSN
Trigger: ATTACTGGGGAAAGTGGAGCAGGAAAAACAGAGGCC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTATAAAGCCCACAATCTaGATGGCATTCCGCACGGTT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIIKPTI*MAFRTV
Trigger: AACCGTGCGGAATGCCATGCAGATTGTGGGCTTTAT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTATCCTGCTCTCAAAATaGTGGTGGGTGGCACATACT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCILLSK*WWVAHT
Trigger: AGTATGTGCCACCCACCAGCATTTTGAGAGCAGGAT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTATCCTGCTCTCAAAATaGTGGTGGGTGGCACATACT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIILLSK*WWVAHT
Trigger: AGTATGTGCCACCCACCAGCATTTTGAGAGCAGGAT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGGAACCGAGAGCACTTaGTCATCCTGCTCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIGTEST*SSCSQN
Trigger: ATTTTGAGAGCAGGATGAGCAAGTGCTCTCGGTTCC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGGAACCGAGAGCACTTaGTCATCCTGCTCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCGTEST*SSCSQN
Trigger: ATTTTGAGAGCAGGATGAGCAAGTGCTCTCGGTTCC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAAGTCCTCCAGGCGTTaGTTCCTCAGGTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIKSSRR*FLRSSN
Trigger: ATTAGAAGACCTGAGGAAGCAACGCCTGGAGGACTT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAAGTCCTCCAGGCGTTaGTTCCTCAGGTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCKSSRR*FLRSSN
Trigger: ATTAGAAGACCTGAGGAAGCAACGCCTGGAGGACTT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGCGGAACTCTTTGTCTaGTGGTACCTCTTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIAELFV*WYLFCC
Trigger: GCAACAAAAGAGGTACCAGCAGACAAAGAGTTCCGC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGCGGAACTCTTTGTCTaGTGGTACCTCTTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCAELFV*WYLFCC
Trigger: GCAACAAAAGAGGTACCAGCAGACAAAGAGTTCCGC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAGCAATGGTCGTGACTaGTTCCTTACAGCGCTTTTG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISNGRD*FLTALL
Trigger: CAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCAAAATGCTGGTGGGTaGCACATACTTGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIQNAGG*HILGSA
Trigger: AGCTGAACCAAGTATGTGCCACCCACCAGCATTTTG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCAAAATGCTGGTGGGTaGCACATACTTGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCQNAGG*HILGSA
Trigger: AGCTGAACCAAGTATGTGCCACCCACCAGCATTTTG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCTCTCAAAATGCTGGTaGGTGGCACATACTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILSKCW*VAHTWF
Trigger: GAACCAAGTATGTGCCACCCACCAGCATTTTGAGAG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CATTTTATTTGTACATACTGGTCTCTTCCACTAGGATGTCAGGTACATGAGGTTTTGTGCGATAGAGCTTaGTGGCCATTTCAATCAGGT +
Preference number: 4 (lower is better)
Translates to: HFICTYWSLPLGCQVHEVLCDRA*WPFQSG
Trigger: ACCTGATTGAAATGGCCACCAAGCTCTATCGCACAA...AACCTCATGTACCTGACATCCTAGTGGAAGAGACCAGTATGTACAAATAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTACAGACTCAGCTTCATaGTCCATAAAGCCCACAATC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCTDSAS*SIKPTI
Trigger: GATTGTGGGCTTTATGGATCATGAAGCTGAGTCTGT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCAACTGTTCGGAAACTaGATGCTCGTTCTAGAACTG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCQLFGN*MLVLEL
Trigger: CAGTTCTAGAACGAGCATTCAGTTTCCGAACAGTTG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTGTCCAGAACACCCATaGCCTTCTTTCTCACTTTTG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCCPEHP*PSFSLL
Trigger: CAAAAGTGAGAAAGAAGGTCATGGGTGTTCTGGACA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTGTCCAGAACACCCATaGCCTTCTTTCTCACTTTTG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTICPEHP*PSFSLL
Trigger: CAAAAGTGAGAAAGAAGGTCATGGGTGTTCTGGACA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTACACTAGAGCCTCGTTaGAGATGTGTGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCTLEPR*RCVLLF
Trigger: AAAAAGCAGCACACATCTTCAACGAGGCTCTAGTGT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTACACTAGAGCCTCGTTaGAGATGTGTGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTITLEPR*RCVLLF
Trigger: AAAAAGCAGCACACATCTTCAACGAGGCTCTAGTGT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGCTGGTCCTTTCCAATaGGGCCATGTTTGTTTACAA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIAGPFQ*GHVCLQ
Trigger: TTGTAAACAAACATGGCCTCATTGGAAAGGACCAGC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGCTGGTCCTTTCCAATaGGGCCATGTTTGTTTACAA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCAGPFQ*GHVCLQ
Trigger: TTGTAAACAAACATGGCCTCATTGGAAAGGACCAGC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGATATATCTTCTGAATaGGAGTGGCCAAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIDISSE*EWPSPP
Trigger: TGGAGGACTTGGCCACTCTCATTCAGAAGATATATC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CATTTTATTTGTACATACTGGTCTCTTCCACTAGGATGTCAGGTACATGAGGTTAAGCCTTCTTGTCTTTaGAGAGTTCACTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: HFICTYWSLPLGCQVHEVKPSCL*RVHWLL
Trigger: TAGAAGCCAGTGAACTCTTCAAAGACAAGAAGGCTT...AACCTCATGTACCTGACATCCTAGTGGAAGAGACCAGTATGTACAAATAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCACCAATGGAACCTCTaGCTTGATTTGTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCHQWNL*LDLSRL
Trigger: AAGTCTGGACAAATCAAGTCAGAGGTTCCATTGGTG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCACCAATGGAACCTCTaGCTTGATTTGTCCAGACTT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIHQWNL*LDLSRL
Trigger: AAGTCTGGACAAATCAAGTCAGAGGTTCCATTGGTG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTCAGGTGATCACTGCTaGAGAGAAAGTCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISGDHC*RESLLY
Trigger: GTAAAGGAGACTTTCTCTTCAGCAGTGATCACCTGA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTCAGGTGATCACTGCTaGAGAGAAAGTCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCSGDHC*RESLLY
Trigger: GTAAAGGAGACTTTCTCTTCAGCAGTGATCACCTGA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTACTCTTCATCCAGCATaGCCAGGATTCCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCTLHPA*PGFHLC
Trigger: ACACAAATGGAATCCTGGCCATGCTGGATGAAGAGT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTACTCTTCATCCAGCATaGCCAGGATTCCATTTGTGT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTITLHPA*PGFHLC
Trigger: ACACAAATGGAATCCTGGCCATGCTGGATGAAGAGT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTGTGCGATAGAGCTTaGTGGCCATTTCAATCAGGT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILCDRA*WPFQSG
Trigger: ACCTGATTGAAATGGCCACCAAGCTCTATCGCACAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTATTCTCTACGTACCTaGGTCCCATGCCAATATGCA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCYSLRT*VPCQYA
Trigger: TGCATATTGGCATGGGACCCAGGTACGTAGAGAATA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCATTGGTCCTTATCTTaGTCTCGTAGGGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIHWSLS*SRRDLY
Trigger: ATACAGATCCCTACGAGATCAAGATAAGGACCAATG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCATTGGTCCTTATCTTaGTCTCGTAGGGATCTGTAT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCHWSLS*SRRDLY
Trigger: ATACAGATCCCTACGAGATCAAGATAAGGACCAATG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCGTTCTAGAACTGATTaGTCAATGCCGGTCAATTCA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCRSRTD*SMPVNS
Trigger: TGAATTGACCGGCATTGATCAATCAGTTCTAGAACG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCGTTCTAGAACTGATTaGTCAATGCCGGTCAATTCA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIRSRTD*SMPVNS
Trigger: TGAATTGACCGGCATTGATCAATCAGTTCTAGAACG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCACATTCAGTGTAGTTaGAACTTTCTCCTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCHIQCS*NFLLFG
Trigger: GCCAAACAGGAGAAAGTTTCAACTACACTGAATGTG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTCGATTTACCAACCATaGAAACAACCTGCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCSIYQP*KQPAVE
Trigger: CTCTACAGCAGGTTGTTTTCATGGTTGGTAAATCGA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGTTTCTGCTGGTCTGTaGATTGGTCCCTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCVSAGL*IGPCIF
Trigger: AAAAATACAGGGACCAATTCACAGACCAGCAGAAAC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAAGCCTTCTTGTCTTTaGAGAGTTCACTGGCTTCTA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCKPSCL*RVHWLL
Trigger: TAGAAGCCAGTGAACTCTTCAAAGACAAGAAGGCTT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTATGGAACCTCTGACTTaGTTTGTCCAGACTTTTGGT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCMEPLT*FVQTFG
Trigger: ACCAAAAGTCTGGACAAATCAAGTCAGAGGTTCCAT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTATGGAACCTCTGACTTaGTTTGTCCAGACTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIMEPLT*FVQTFG
Trigger: ACCAAAAGTCTGGACAAATCAAGTCAGAGGTTCCAT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTTTTCCACAAACAGCTaGCACATAGGACATGACAAG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCFSTNS*HIGHDK
Trigger: CTTGTCATGTCCTATGTGGCAGCTGTTTGTGGAAAA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTTTCCACAAACAGCTaGCACATAGGACATGACAAG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIFSTNS*HIGHDK
Trigger: CTTGTCATGTCCTATGTGGCAGCTGTTTGTGGAAAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGTGTATATTTCACTGTaGTCAAAGCGCTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIVYISL*SKRFLR
Trigger: CCTCAAGAAGCGCTTTGACCACAGTGAAATATACAC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTCTCTGGTGAATAAATaGGTAAAGACCGGTATGGGT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISLVNK*VKTGMG
Trigger: ACCCATACCGGTCTTTACCCATTTATTCACCAGAGA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGTTTCTTTCACCTCTTaGCTGTTTAACAACCCGAGA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIVSFTS*LFNNPR
Trigger: TCTCGGGTTGTTAAACAGCCAAGAGGTGAAAGAAAC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAAACTTTCTCCTGTTTaGCCTCAACTGTTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIKLSPV*PQLFGN
Trigger: GTTTCCGAACAGTTGAGGCCAAACAGGAGAAAGTTT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAAACTTTCTCCTGTTTaGCCTCAACTGTTCGGAAAC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCKLSPV*PQLFGN
Trigger: GTTTCCGAACAGTTGAGGCCAAACAGGAGAAAGTTT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTGGGTGGCACATACTTaGTTCAGCTTTTCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIWVAHT*FSFSKK
Trigger: CTTCTTAGAAAAGCTGAACCAAGTATGTGCCACCCA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTGGGTGGCACATACTTaGTTCAGCTTTTCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCWVAHT*FSFSKK
Trigger: CTTCTTAGAAAAGCTGAACCAAGTATGTGCCACCCA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAGCTCATTGATACCTTaGTCACATCCACCAATGGAA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCSSLIP*SHPPME
Trigger: TTCCATTGGTGGATGTGACCAAGGTATCAATGAGCT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp ACTTGGTCAGTGTCATTCACTGCCCATTTATCATGTGGAACAACTACTAGACACTTTATTTGTACATACTaGTCTCTTCCACTAGGATGT +
Preference number: 4 (lower is better)
Translates to: TWSVSFTAHLSCGTTTRHFICTY*SLPLGC
Trigger: ACATCCTAGTGGAAGAGACCAGTATGTACAAATAAA...GTGTCTAGTAGTTGTTCCACATGATAAATGGGCAGTGAATGACACTGACCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCATATTGTCCAGAAGTaGGGTTTTCACCTCCATTTT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCHIVQK*GFHLHF
Trigger: AAAATGGAGGTGAAAACCTCACTTCTGGACAATATG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGGTTCTAAAATTTGCTaGATCATCCACTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCGSKIC*IIHSIH
Trigger: GTGAATGGAGTGGATGATGCAGCAAATTTTAGAACC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGGTTCTAAAATTTGCTaGATCATCCACTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIGSKIC*IIHSIH
Trigger: GTGAATGGAGTGGATGATGCAGCAAATTTTAGAACC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCACGGTTCTAAAATTTaGTGCATCATCCACTCCATT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIHGSKI*CIIHSI
Trigger: AATGGAGTGGATGATGCAGCAAATTTTAGAACCGTG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp TTTCATCATTTTATTTGTACATACTGGTCTCTTCCACTAGGATGTCAGGTACATGTCAGTGTCATTCACTaGCCATTTATCATGTGGAAC +
Preference number: 4 (lower is better)
Translates to: FHHFICTYWSLPLGCQVHVSVIH*PFIMWN
Trigger: GTTCCACATGATAAATGGGCAGTGAATGACACTGAC...ATGTACCTGACATCCTAGTGGAAGAGACCAGTATGTACAAATAAAATGATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTTACACCTCCACAAGTaGAAAATCCTTTTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCLHLHK*KILFSS
Trigger: GGAGCTAAAAAGGATTTTCCACTTGTGGAGGTGTAA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTACACCTCCACAAGTaGAAAATCCTTTTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILHLHK*KILFSS
Trigger: GGAGCTAAAAAGGATTTTCCACTTGTGGAGGTGTAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTTCTTGGGTTTCGGATaGATATCTTTGATCTACCAA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCFLGFG*ISLIYQ
Trigger: TTGGTAGATCAAAGATATTCATCCGAAACCCAAGAA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTCTTGGGTTTCGGATaGATATCTTTGATCTACCAA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIFLGFG*ISLIYQ
Trigger: TTGGTAGATCAAAGATATTCATCCGAAACCCAAGAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCTTTTTAGCTCCTTGTaGGTAGAATCCAAGAATAAG +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILFSSL*VESKNK
Trigger: CTTATTCTTGGATTCTACTCACAAGGAGCTAAAAAG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTGTTTTACTGCTATCTaGATGGCTTTTAGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCCFTAI*MAFSPL
Trigger: TAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTACAAAAATACAGTTGTaGTTCAGGAAATGGCACCAA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCTKIQL*FRKWHQ
Trigger: TTGGTGCCATTTCCTGAATCACAACTGTATTTTTGT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR TCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTACAAAAATACAGTTGTaGTTCAGGAAATGGCACCAA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTITKIQL*FRKWHQ
Trigger: TTGGTGCCATTTCCTGAATCACAACTGTATTTTTGT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAACTTGATTAACTTCTaGTCCTTTTCCACAAACAGC +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCNLINF*SFSTNS
Trigger: GCTGTTTGTGGAAAAGGAGCAGAAGTTAATCAAGTT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCGTATATACTCCTCCTaGTCTTCTTTAAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCRIYSS*SSLRVS
Trigger: ACTTACTCTTAAAGAAGAGCAGGAGGAGTATATACG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCGTATATACTCCTCCTaGTCTTCTTTAAGAGTAAGT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIRIYSS*SSLRVS
Trigger: ACTTACTCTTAAAGAAGAGCAGGAGGAGTATATACG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGAACTGATTGATCAATaGCGGTCAATTCACAAATTT +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCELIDQ*RSIHKF
Trigger: AAATTTGTGAATTGACCGGCATTGATCAATCAGTTC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR GCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGAACTGATTGATCAATaGCGGTCAATTCACAAATTT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIELIDQ*RSIHKF
Trigger: AAATTTGTGAATTGACCGGCATTGATCAATCAGTTC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTATAGTTTGGGTTCTTaGTCTGTAGGTTTTTCATCA +
Preference number: 4 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCYSLGS*SVGFSS
Trigger: TGATGAAAAACCTACAGACCAAGAACCCAAACTATA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTATAGTTTGGGTTCTTaGTCTGTAGGTTTTTCATCA +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIYSLGS*SVGFSS
Trigger: TGATGAAAAACCTACAGACCAAGAACCCAAACTATA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CCA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTACTGCTATCTGAATaGCTTTTAGCCCTTTACTTT +
Preference number: 4 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILLLSE*LLALYF
Trigger: AAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS GCA 90 bp CTGTCCCGCGGCTGCCGGCCGACTGCGCGCCGCGCGCTCTGGTACTaGCTCCACGCGCCGCGGTTGAGGCTCCCGTGCGCACCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSRGCRPTARRALWY*LHAPRLRLPCAPSC
Trigger: GCAGCTGGGTGCGCACGGGAGCCTCAACCGCGGCGCGTGGAGGCAGTACCAGAGCGCGCGGCGCGCAGTCGGCCGGCAGCCGCGGGACAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS GCA 90 bp TGCGGGGCTCCCGCCGCGGCTGTTCTGCCAAGGCTGTCCCGCGGCTaGCGGCCGACTGCGCGCCGCGCGCTCTGGTACTGCCTCCACGCG +
Preference number: 5 (lower is better)
Translates to: CGAPAAAVLPRLSRG*RPTARRALWYCLHA
Trigger: CGCGTGGAGGCAGTACCAGAGCGCGCGGCGCGCAGTCGGCCGGCAGCCGCGGGACAGCCTTGGCAGAACAGCCGCGGCGGGAGCCCCGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS TCA 90 bp CGACTGCGCGCCGCGCGCTCTGGTACTGCCTCCACGCGCCGCGGTTaGGGCTCCCGTGCGCACCCAGCTGCGGAGTGCTCAGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: RLRAARSGTASTRRG*GSRAHPAAECSAAA
Trigger: CGCCGCCGCTGAGCACTCCGCAGCTGGGTGCGCACGGGAGCCTCAACCGCGGCGCGTGGAGGCAGTACCAGAGCGCGCGGCGCGCAGTCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS GCA 90 bp CGCGCGCTCTGGTACTGCCTCCACGCGCCGCGGTTGAGGCTCCCGTaGGCACCCAGCTGCGGAGTGCTCAGCGGCGGCGGGAGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: RALWYCLHAPRLRLP*APSCGVLSGGGRSP
Trigger: CGGGCTCCTCCCGCCGCCGCTGAGCACTCCGCAGCTGGGTGCGCACGGGAGCCTCAACCGCGGCGCGTGGAGGCAGTACCAGAGCGCGCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS GCA 90 bp CGCCGCGGCTGTTCTGCCAAGGCTGTCCCGCGGCTGCCGGCCGACTaGGCGCCGCGCGCTCTGGTACTGCCTCCACGCGCCGCGGTTGAG +
Preference number: 5 (lower is better)
Translates to: RRGCSAKAVPRLPAD*APRALVLPPRAAVE
Trigger: CTCAACCGCGGCGCGTGGAGGCAGTACCAGAGCGCGCGGCGCGCAGTCGGCCGGCAGCCGCGGGACAGCCTTGGCAGAACAGCCGCGGCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS GCA 90 bp TACTGCCTCCACGCGCCGCGGTTGAGGCTCCCGTGCGCACCCAGCTaGGGAGTGCTCAGCGGCGGCGGGAGGAGCCCGGCCACTCCCCTC +
Preference number: 5 (lower is better)
Translates to: YCLHAPRLRLPCAPS*GVLSGGGRSPATPL
Trigger: GAGGGGAGTGGCCGGGCTCCTCCCGCCGCCGCTGAGCACTCCGCAGCTGGGTGCGCACGGGAGCCTCAACCGCGGCGCGTGGAGGCAGTA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCTCCACGCGCCGCGGTaGAGGCTCCCGTGCGCACCC +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILHAPR*RLPCAP
Trigger: GGGTGCGCACGGGAGCCTCAACCGCGGCGCGTGGAG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS CCA 90 bp CAACTCCAATCATATTGTCCAGAAGTGAGGTTTTCACCTCCATTTTaGCCATGGTCTCCAGCTCTGTCCGCCCGGTGCCGGCTTCACAGC +
Preference number: 5 (lower is better)
Translates to: QLQSYCPEVRFSPPF*PWSPALSARCRLHS
Trigger: GCTGTGAAGCCGGCACCGGGCGGACAGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAACCTCACTTCTGGACAATATGATTGGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418908.5
CDS TCA 90 bp GTTCCCTTCGTGCCTGGGTCCCATGCCAATATGCAGCAATGGTCGTaGCTGCTTCCTTACAGCGCTTTTGATGCTTCAGTTCCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: VPFVPGSHANMQQWS*LLPYSAFDASVPAE
Trigger: TTCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTGGCATGGGACCCAGGCACGAAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304164.8
ENST00000392318.8
CDS TCA 90 bp TACAAAGCATTTTGTATCTTTCTAGGCAAGGTTCATAGGCCTGCCTaGAGGCGTAGCCTGCCCTCCGCACTCGGACGTTCTCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: YKAFCIFLGKVHRPA*RRSLPSALGRSPKA
Trigger: GGCTTTTGGAGAACGTCCGAGTGCGGAGGGCAGGCTACGCCTTCAGGCAGGCCTATGAACCTTGCCTAGAAAGATACAAAATGCTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 90 bp ATTAGCAGGAAGTGTGTGCGGCATTTCCACCCCCGATATATCTTCTaGATGAGAGTGGCCAAGTCCTCCAGGCGTTGCTTCCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ISRKCVRHFHPRYIF*MRVAKSSRRCFLRS
Trigger: AGACCTGAGGAAGCAACGCCTGGAGGACTTGGCCACTCTCATTCAGAAGATATATCGGGGGTGGAAATGCCGCACACACTTCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 90 bp ATTCCCTTCGAGCCTGGGTCCCATGCCAATATGCAGCAATGGTCGTaGCTGCTTCCTTACAGCGCTTTTGATGCTTCAGTTCCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: IPFEPGSHANMQQWS*LLPYSAFDASVPAE
Trigger: TTCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTGGCATGGGACCCAGGCTCGAAGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392316.5
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTCGGGGAACAAAGACTaGATGAGGGCATGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISGNKD*MRAWLA
Trigger: GGCCAGCCATGCCCTCATCAAGTCTTTGTTCCCCGA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGCTTCTGAGCCCTCTTaGAGGTGGACGGCGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIASEPS*RWTAKK
Trigger: CTTCTTCGCCGTCCACCTCAAAGAGGGCTCAGAAGC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 90 bp AGTTTCAACACTGCTGCCACCACCGCCAAGACAGACTCAGCTTCATaGTCCATAAAGCCCACAATCTGCATGGCATTCCGCACGGTTCTA +
Preference number: 5 (lower is better)
Translates to: SFNTAATTAKTDSAS*SIKPTICMAFRTVL
Trigger: TAGAACCGTGCGGAATGCCATGCAGATTGTGGGCTTTATGGATCATGAAGCTGAGTCTGTCTTGGCGGTGGTGGCAGCAGTGTTGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000451437.5
CDS GCA 90 bp TCGAGATTCGGGCTTGAACTCAATGTTCCCCAGTTTCAACACTGCTaGCACCACCGCCAAGACAGACTCAGCTTCATGATCCATAAAGCC +
Preference number: 5 (lower is better)
Translates to: SRFGLELNVPQFQHC*HHRQDRLSFMIHKA
Trigger: GGCTTTATGGATCATGAAGCTGAGTCTGTCTTGGCGGTGGTGGCAGCAGTGTTGAAACTGGGGAACATTGAGTTCAAGCCCGAATCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000451437.5
CDS GCA 90 bp CCTTCGTGCCTGGGTCCCATGCCAATATGCAGCAATGGTCGTGACTaGTTCCTTACAGCGCTTTTGATGCTTCAGTTCCCGCAGAATTTT +
Preference number: 5 (lower is better)
Translates to: PSCLGPMPICSNGRD*FLTALLMLQFPQNF
Trigger: AAAATTCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTGGCATGGGACCCAGGCACGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304164.8
ENST00000392318.8
CDS GCA 90 bp CCTTCGAGCCTGGGTCCCATGCCAATATGCAGCAATGGTCGTGACTaGTTCCTTACAGCGCTTTTGATGCTTCAGTTCCCGCAGAATTTT +
Preference number: 5 (lower is better)
Translates to: PSSLGPMPICSNGRD*FLTALLMLQFPQNF
Trigger: AAAATTCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTGGCATGGGACCCAGGCTCGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392316.5
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGGCAGAGACGTGTCATaGAGGAACCGAGAGCACTTG +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIGRDVS*RNREHL
Trigger: CAAGTGCTCTCGGTTCCTCAATGACACGTCTCTGCC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCTTTTCAGGTTGATCTaGGCGGGATTCCCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILFRLI*AGFPSG
Trigger: CCCCGAAGGGAATCCCGCCAAGATCAACCTGAAAAG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGGAGGCCTTTTCAGGTaGATCTTGGCGGGATTCCCT +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIGGLFR*ILAGFP
Trigger: AGGGAATCCCGCCAAGATCAACCTGAAAAGGCCTCC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 90 bp ATTCTCTACGTACCTGGGTCCCATGCCAATATGCAGCAATGGTCGTaGCTGCTTCCTTACAGCGCTTTTGATGCTTCAGTTCCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: ILYVPGSHANMQQWS*LLPYSAFDASVPAE
Trigger: TTCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTGGCATGGGACCCAGGTACGTAGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS GCA 90 bp CACTCGAGATTCGGGCTTGAACTCAATGTTCCCCAGTTTCAACACTaGTGCCACCACCGCCAAGACAGACTCAGCTTCATGATCCATAAA +
Preference number: 5 (lower is better)
Translates to: HSRFGLELNVPQFQH*CHHRQDRLSFMIHK
Trigger: TTTATGGATCATGAAGCTGAGTCTGTCTTGGCGGTGGTGGCAGCAGTGTTGAAACTGGGGAACATTGAGTTCAAGCCCGAATCTCGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000451437.5
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGTTTTCACCTCCATTTaGGCCATGGTCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIVFTSI*AMVSSS
Trigger: CGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAAC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGCTTCCAGGACCGGGTaGGACTGTAAAAGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIASRTG*DCKSCS
Trigger: AGAACAGCTTTTACAGTCCAACCCGGTCCTGGAAGC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTCCACTCCATTCACTTaGGCCGAATCCAGACTCAGG +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISTPFT*AESRLR
Trigger: CCTGAGTCTGGATTCGGCCAAAGTGAATGGAGTGGA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAGCCCCTTGGAATGGTaGCCCAACACTAGATGGGTA +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISPLEW*PNTRWV
Trigger: TACCCATCTAGTGTTGGGCAACCATTCCAAGGGGCT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GTTGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCATGTGGAACAACTACGCTTCTGAGCCCTCTTaGAGGTGGACGGCGAAGAAG +
Preference number: 5 (lower is better)
Translates to: VGDLVSVIHCPFIMWNNYASEPS*RWTAKK
Trigger: CTTCTTCGCCGTCCACCTCAAAGAGGGCTCAGAAGC...GTAGTTGTTCCACATGATAAATGGGCAGTGAATGACACTGACCAAGTCTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS TCA 90 bp GCTCCACAATCTCTGTCACCAAGTTCTGAATCTCCCATTCTCAGGTaGAACTTCAGAGCTCAAGGAAGTCCCCCTGAACTGACCCCTTAT +
Preference number: 5 (lower is better)
Translates to: APQSLSPSSESPILR*NFRAQGSPPELTPY
Trigger: ATAAGGGGTCAGTTCAGGGGGACTTCCTTGAGCTCTGAAGTTTCACCTGAGAATGGGAGATTCAGAACTTGGTGACAGAGATTGTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494129.1
CDS GCA 90 bp GTGTCATTGAGGAACCGAGAGCACTTGCTCATCCTGCTCTCAAAATaGTGGTGGGTGGCACATACTTGGTTCAGCTTTTCTAAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: VSLRNREHLLILLSK*WWVAHTWFSFSKKV
Trigger: GACCTTCTTAGAAAAGCTGAACCAAGTATGTGCCACCCACCAGCATTTTGAGAGCAGGATGAGCAAGTGCTCTCGGTTCCTCAATGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000494129.1
ENST00000634375.1
CDS GCA 90 bp TCTACGTACCTGGGTCCCATGCCAATATGCAGCAATGGTCGTGACTaGTTCCTTACAGCGCTTTTGATGCTTCAGTTCCCGCAGAATTTT +
Preference number: 5 (lower is better)
Translates to: STYLGPMPICSNGRD*FLTALLMLQFPQNF
Trigger: AAAATTCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTGGCATGGGACCCAGGTACGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS CCA 90 bp CACTTGCTCATCCTGCTCTCAAAATGCTGGTGGGTGGCACATACTTaGTTCAGCTTTTCTAAGAAGGTCTCATCAGTGACTGTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: HLLILLSKCWWVAHT*FSFSKKVSSVTVPG
Trigger: ACCTGGCACAGTCACTGATGAGACCTTCTTAGAAAAGCTGAACCAAGTATGTGCCACCCACCAGCATTTTGAGAGCAGGATGAGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000494129.1
ENST00000634375.1
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTACTCGAGATTCGGGCTaGAACTCAATGTTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYITRDSG*NSMFPS
Trigger: ACTGGGGAACATTGAGTTCAAGCCCGAATCTCGAGT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAGGAACCGAGAGCACTaGCTCATCCTGCTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIRNREH*LILLSK
Trigger: TTTTGAGAGCAGGATGAGCAAGTGCTCTCGGTTCCT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS GCA 90 bp ACCCAAAGAATTGGTGTCAGGCTGGTGCAGCGCTTATATTTTCAGTaGACTGAGATTCTGTTCCAGAGAAGGACAATCTGTGTGGTTCCC +
Preference number: 5 (lower is better)
Translates to: TQRIGVRLVQRLYFQ*TEILFQRRTICVVP
Trigger: GGGAACCACACAGATTGTCCTTCTCTGGAACAGAATCTCAGTGCACTGAAAATATAAGCGCTGCACCAGCCTGACACCAATTCTTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490069.1
CDS CCA 90 bp TTGAGGAACCGAGAGCACTTGCTCATCCTGCTCTCAAAATGCTGGTaGGTGGCACATACTTGGTTCAGCTTTTCTAAGAAGGTCTCATCA +
Preference number: 5 (lower is better)
Translates to: LRNREHLLILLSKCW*VAHTWFSFSKKVSS
Trigger: TGATGAGACCTTCTTAGAAAAGCTGAACCAAGTATGTGCCACCCACCAGCATTTTGAGAGCAGGATGAGCAAGTGCTCTCGGTTCCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000494129.1
ENST00000634375.1
CDS CCA 90 bp TCATTGAGGAACCGAGAGCACTTGCTCATCCTGCTCTCAAAATGCTaGTGGGTGGCACATACTTGGTTCAGCTTTTCTAAGAAGGTCTCA +
Preference number: 5 (lower is better)
Translates to: SLRNREHLLILLSKC*WVAHTWFSFSKKVS
Trigger: TGAGACCTTCTTAGAAAAGCTGAACCAAGTATGTGCCACCCACCAGCATTTTGAGAGCAGGATGAGCAAGTGCTCTCGGTTCCTCAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000494129.1
ENST00000634375.1
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAAGCGCTTCTTGAGGTaGTTGATGAAGGTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIKRFLR*LMKVSS
Trigger: TGAGGAGACCTTCATCAACAACCTCAAGAAGCGCTT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTGGTCAAAGCGCTTCTaGAGGTTGTTGATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIWSKRF*RLLMKV
Trigger: GACCTTCATCAACAACCTCAAGAAGCGCTTTGACCA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCTGCTGGTACCTCTTTaGTTGCGCATATCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILLVPL*LRISPV
Trigger: TACAGGAGATATGCGCAACAAAAGAGGTACCAGCAG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCTAAGGCGGAACTCTTaGTCTGCTGGTACCTCTTTT +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILRRNS*SAGTSF
Trigger: AAAAGAGGTACCAGCAGACAAAGAGTTCCGCCTTAG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGAGCTCATTGATACCTaGGTCACATCCACCAATGGA +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIELIDT*VTSTNG
Trigger: TCCATTGGTGGATGTGACCAAGGTATCAATGAGCTC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGAGCTTCTGTTTGGTTaGGCTGAGAGTTGTGCGATA +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIELLFG*AESCAI
Trigger: TATCGCACAACTCTCAGCCAAACCAAACAGAAGCTC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 90 bp AAGAATTGGTGTCAGGCTGGTGCAGCGCTTATATTTTCAGTGCACTaGGATTCTGTTCCAGAGAAGGACAATCTGTGTGGTTCCCAAGGT +
Preference number: 5 (lower is better)
Translates to: KNWCQAGAALIFSVH*DSVPEKDNLCGSQG
Trigger: ACCTTGGGAACCACACAGATTGTCCTTCTCTGGAACAGAATCTCAGTGCACTGAAAATATAAGCGCTGCACCAGCCTGACACCAATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490069.1
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGAAACTTTCTCCTGTTaGGCCTCAACTGTTCGGAAA +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIETFSC*ASTVRK
Trigger: TTTCCGAACAGTTGAGGCCAAACAGGAGAAAGTTTC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp TGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCATGTGGAACAACTACTAAGCCCCTTGGAATGGTaGCCCAACACTAGATGGGTA +
Preference number: 5 (lower is better)
Translates to: WRLGQCHSLPIYHVEQLLSPLEW*PNTRWV
Trigger: TACCCATCTAGTGTTGGGCAACCATTCCAAGGGGCT...TAGTAGTTGTTCCACATGATAAATGGGCAGTGAATGACACTGACCAAGTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CAA 90 bp TGTCAGGTACATGAGGTTGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCGAGCTCATTGATACCTaGGTCACATCCACCAATGGA +
Preference number: 5 (lower is better)
Translates to: CQVHEVGDLVSVIHCPFIELIDT*VTSTNG
Trigger: TCCATTGGTGGATGTGACCAAGGTATCAATGAGCTC...GATAAATGGGCAGTGAATGACACTGACCAAGTCTCCAACCTCATGTACCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CAA 90 bp CCACTAGGATGTCAGGTACATGAGGTTGGAGACTTGGTCAGTGTCATTCACTGCCATTTTGTGAGCTCATaGATACCTTGGTCACATCCA +
Preference number: 5 (lower is better)
Translates to: PLGCQVHEVGDLVSVIHCHFVSS*IPWSHP
Trigger: TGGATGTGACCAAGGTATCAATGAGCTCACAAAATG...GCAGTGAATGACACTGACCAAGTCTCCAACCTCATGTACCTGACATCCTAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS TCA 90 bp CCTGCTCCACTTTCCCCAGTAATGAGAATACATTGGTCCTTATCTTaGTCTCGTAGGGATCTGTATGCTTCATCCGAAAGGGCAAAGATG +
Preference number: 5 (lower is better)
Translates to: PAPLSPVMRIHWSLS*SRRDLYASSERAKM
Trigger: CATCTTTGCCCTTTCGGATGAAGCATACAGATCCCTACGAGATCAAGATAAGGACCAATGTATTCTCATTACTGGGGAAAGTGGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000418908.5
ENST00000438652.5
ENST00000451437.5
ENST00000471904.1
CDS TCA 90 bp AAGTTGATCGAGAGTCCATCATGGATACATGCTGGACTCTTCTGTTaGCAACCTCCCACTCTGACCCATGCTACTGGTATACAAACAGTA +
Preference number: 5 (lower is better)
Translates to: KLIESPSWIHAGLFC*QPPTLTHATGIQTV
Trigger: TACTGTTTGTATACCAGTAGCATGGGTCAGAGTGGGAGGTTGTCAACAGAAGAGTCCAGCATGTATCCATGATGGACTCTCGATCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451437.5
CDS TCA 90 bp GCCTTCTCCACACTCTTTCACTCCCATATCAAAGCCTTCAAACTCTaGGTAACAGCCCTAATGATGTCATTAGACTCCCCTTTGCTGACA +
Preference number: 5 (lower is better)
Translates to: AFSTLFHSHIKAFKL*VTALMMSLDSPLLT
Trigger: TGTCAGCAAAGGGGAGTCTAATGACATCATTAGGGCTGTTACTCAGAGTTTGAAGGCTTTGATATGGGAGTGAAAGAGTGTGGAGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490069.1
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCCAACTCCAATCATATaGTCCAGAAGTGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIPTPII*SRSEVF
Trigger: GAAAACCTCACTTCTGGACAATATGATTGGAGTTGG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTATGAAGGTCTCCTCATaGAGAGGTTCTAAAAGAACC +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIMKVSS*RGSKRT
Trigger: GGTTCTTTTAGAACCTCTCAATGAGGAGACCTTCAT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTCAAGCTTAAGTTTATaGAGGAGCTCTTCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISSLSL*RSSSEA
Trigger: TGCCTCTGAAGAGCTCCTCAATAAACTTAAGCTTGA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAGAAGGTCATTGTTTTaGTCAACGAATCCTTCCACC +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIRRSLF*STNPST
Trigger: GGTGGAAGGATTCGTTGACAAAAACAATGACCTTCT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTCGGGGAACAAAGACTaGATGAGGGCATGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISGNKD*MRAWLA
Trigger: GGCCAGCCATGCCCTCATCAAGTCTTTGTTCCCCGA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTCGGGGAACAAAGACTaGATGAGGGCATGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCSGNKD*MRAWLA
Trigger: GGCCAGCCATGCCCTCATCAAGTCTTTGTTCCCCGA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGCCAATTCTTGTCTATaGGAGATAAGGAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIANSCL*EIRKAS
Trigger: AGATGCCTTCCTTATCTCCAATAGACAAGAATTGGC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTGATTTGTCCAGACTTTaGGTCAGCAAGAAGGAGATT +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIDLSRL*VSKKEI
Trigger: AATCTCCTTCTTGCTGACCAAAAGTCTGGACAAATC...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCATTTTGTGAGCTCATaGATACCTTGGTCACATCCA +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIHFVSS*IPWSHP
Trigger: TGGATGTGACCAAGGTATCAATGAGCTCACAAAATG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGCTTCTGAGCCCTCTTaGAGGTGGACGGCGAAGAAG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCASEPS*RWTAKK
Trigger: CTTCTTCGCCGTCCACCTCAAAGAGGGCTCAGAAGC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTATATTGAGCTTCTGTTaGGTTTGGCTGAGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIILSFC*VWLRVV
Trigger: CACAACTCTCAGCCAAACCAAACAGAAGCTCAATAT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAACTTCACACATACTTaGTCCTGTCTGAACTGTACC +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYINFTHT*SCLNCT
Trigger: GGTACAGTTCAGACAGGACAAAGTATGTGTGAAGTT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 90 bp AGAAACAATCTCACTTCCTTTGCTGAAGGATCAGCAAAGACACAGTaGGCTCCACAATCTCTGTCACCAAGTTCTGAATCTCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: RNNLTSFAEGSAKTQ*APQSLSPSSESPIL
Trigger: GAGAATGGGAGATTCAGAACTTGGTGACAGAGATTGTGGAGCTCACTGTGTCTTTGCTGATCCTTCAGCAAAGGAAGTGAGATTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494129.1
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTCCAAATCTAGAGGAGTaGTCATTCCTTACAGTTTTG +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIPNLEE*SFLTVL
Trigger: CAAAACTGTAAGGAATGACAACTCCTCTAGATTTGG...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGGCAGAGACGTGTCATaGAGGAACCGAGAGCACTTG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIGRDVS*RNREHL
Trigger: CAAGTGCTCTCGGTTCCTCAATGACACGTCTCTGCC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCTTTTCAGGTTGATCTaGGCGGGATTCCCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILFRLI*AGFPSG
Trigger: CCCCGAAGGGAATCCCGCCAAGATCAACCTGAAAAG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCTTTTCAGGTTGATCTaGGCGGGATTCCCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCLFRLI*AGFPSG
Trigger: CCCCGAAGGGAATCCCGCCAAGATCAACCTGAAAAG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGGAGGCCTTTTCAGGTaGATCTTGGCGGGATTCCCT +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCGGLFR*ILAGFP
Trigger: AGGGAATCCCGCCAAGATCAACCTGAAAAGGCCTCC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAGAATAAGTAAGGTCTaGAGGGCCAATTCTTGTCTA +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIRISKV*RANSCL
Trigger: TAGACAAGAATTGGCCCTCAAGACCTTACTTATTCT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTCTTCAATGGCATCTTaGAGTTTCTTATACTTGGGG +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISSMAS*SFLYLG
Trigger: CCCCAAGTATAAGAAACTCAAAGATGCCATTGAAGA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTTAGCACGGTTAATTTaGTTCACGACTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILARLI*FTTSAM
Trigger: CATTGCTGAAGTCGTGAACAAAATTAACCGTGCTAA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGGTACATGAGGTTGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCATGGATTTGTCCAGACTTTaGGTCAGCAAGAAGGAGATT +
Preference number: 5 (lower is better)
Translates to: QVHEVGDLVSVIHCPFIMDLSRL*VSKKEI
Trigger: AATCTCCTTCTTGCTGACCAAAAGTCTGGACAAATC...CATGATAAATGGGCAGTGAATGACACTGACCAAGTCTCCAACCTCATGTACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CAA 90 bp TGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCATGTGGAACAACTACTAGAGCTTCTGTTTGGTTaGGCTGAGAGTTGTGCGATA +
Preference number: 5 (lower is better)
Translates to: WRLGQCHSLPIYHVEQLLELLFG*AESCAI
Trigger: TATCGCACAACTCTCAGCCAAACCAAACAGAAGCTC...TAGTAGTTGTTCCACATGATAAATGGGCAGTGAATGACACTGACCAAGTCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTCGGAAATCTCAATATaGAGCTTCTGTTTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISEISI*SFCLVW
Trigger: CCAAACCAAACAGAAGCTCAATATTGAGATTTCCGA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 90 bp TTACCCTCTGCTTGGGCTACACTCAGATTGAAGCAAAGGGAAAAATaGTATTCCTTCGGGGTGCTCTCACATTTGAACTGTGAAAGTTTC +
Preference number: 5 (lower is better)
Translates to: LPSAWATLRLKQREK*YSFGVLSHLNCESF
Trigger: GAAACTTTCACAGTTCAAATGTGAGAGCACCCCGAAGGAATATCATTTTTCCCTTTGCTTCAATCTGAGTGTAGCCCAAGCAGAGGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494129.1
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGTTTTCACCTCCATTTaGGCCATGGTCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCVFTSI*AMVSSS
Trigger: CGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAAC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGTTTTCACCTCCATTTaGGCCATGGTCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIVFTSI*AMVSSS
Trigger: CGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAAC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTAGTAATGAGAATACATaGGTCCTTATCTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYISNENT*VLILIS
Trigger: CGAGATCAAGATAAGGACCAATGTATTCTCATTACT...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGCTTCCAGGACCGGGTaGGACTGTAAAAGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIASRTG*DCKSCS
Trigger: AGAACAGCTTTTACAGTCCAACCCGGTCCTGGAAGC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTCCACTCCATTCACTTaGGCCGAATCCAGACTCAGG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISTPFT*AESRLR
Trigger: CCTGAGTCTGGATTCGGCCAAAGTGAATGGAGTGGA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTGGCCAGGATTCCATTaGTGTTATTTTCTATTAGGT +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIWPGFH*CYFLLG
Trigger: ACCTAATAGAAAATAACACAAATGGAATCCTGGCCA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTTCCAAGAAGTATTTTaGCACAATTCTCTGAAGCGT +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIFQEVF*HNSLKR
Trigger: ACGCTTCAGAGAATTGTGCAAAAATACTTCTTGGAA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAGCCCCTTGGAATGGTaGCCCAACACTAGATGGGTA +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCSPLEW*PNTRWV
Trigger: TACCCATCTAGTGTTGGGCAACCATTCCAAGGGGCT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAGCCCCTTGGAATGGTaGCCCAACACTAGATGGGTA +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISPLEW*PNTRWV
Trigger: TACCCATCTAGTGTTGGGCAACCATTCCAAGGGGCT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTTGAGTTTCTTATACTaGGGGTTCTTGTTGATTTCC +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYILSFLY*GFLLIS
Trigger: GGAAATCAACAAGAACCCCAAGTATAAGAAACTCAA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGGTACATGAGGTTGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCATGTTAGCACGGTTAATTTaGTTCACGACTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: QVHEVGDLVSVIHCPFIMLARLI*FTTSAM
Trigger: CATTGCTGAAGTCGTGAACAAAATTAACCGTGCTAA...CATGATAAATGGGCAGTGAATGACACTGACCAAGTCTCCAACCTCATGTACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CAA 90 bp TGTCAGGTACATGAGGTTGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCTCGGAAATCTCAATATaGAGCTTCTGTTTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: CQVHEVGDLVSVIHCPFISEISI*SFCLVW
Trigger: CCAAACCAAACAGAAGCTCAATATTGAGATTTCCGA...GATAAATGGGCAGTGAATGACACTGACCAAGTCTCCAACCTCATGTACCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CAA 90 bp CTGGTCATTCATTTCTGCCCCCTCTTAGGACCAGCCCTTCTTGAAGCCTATATTTTTTTCGTTTACATGTaGGGACACTCCCATTTTTCT +
Preference number: 5 (lower is better)
Translates to: LVIHFCPLLGPALLEAYIFFVYM*GHSHFS
Trigger: AGAAAAATGGGAGTGTCCCAACATGTAAACGAAAAA...AATATAGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 90 bp AGCTCATTGATACCTTGGTCACATCCACCAATGGAACCTCTGACTTaGTTTGTCCAGACTTTTGGTCAGCAAGAAGGAGATTATTGTTTG +
Preference number: 5 (lower is better)
Translates to: SSLIPWSHPPMEPLT*FVQTFGQQEGDYCL
Trigger: CAAACAATAATCTCCTTCTTGCTGACCAAAAGTCTGGACAAATCAAGTCAGAGGTTCCATTGGTGGATGTGACCAAGGTATCAATGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000427152.1
ENST00000490069.1
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTACTCGAGATTCGGGCTaGAACTCAATGTTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCTRDSG*NSMFPS
Trigger: ACTGGGGAACATTGAGTTCAAGCCCGAATCTCGAGT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTACTCGAGATTCGGGCTaGAACTCAATGTTCCCCAGT +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTITRDSG*NSMFPS
Trigger: ACTGGGGAACATTGAGTTCAAGCCCGAATCTCGAGT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAGGAACCGAGAGCACTaGCTCATCCTGCTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCRNREH*LILLSK
Trigger: TTTTGAGAGCAGGATGAGCAAGTGCTCTCGGTTCCT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAGGAACCGAGAGCACTaGCTCATCCTGCTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIRNREH*LILLSK
Trigger: TTTTGAGAGCAGGATGAGCAAGTGCTCTCGGTTCCT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTCCTTACAGCGCTTTaGATGCTTCAGTTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIFLTAL*MLQFPQ
Trigger: CTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTTCCTTACAGCGCTTTaGATGCTTCAGTTCCCGCAG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCFLTAL*MLQFPQ
Trigger: CTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGAA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp TGTCAGGTACATGAGGTTGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCGAAGGAGATTATTGTTaGTTAAGAGGAAAATCCGAG +
Preference number: 5 (lower is better)
Translates to: CQVHEVGDLVSVIHCPFIEGDYC*LRGKSE
Trigger: CTCGGATTTTCCTCTTAACAAACAATAATCTCCTTC...GATAAATGGGCAGTGAATGACACTGACCAAGTCTCCAACCTCATGTACCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CAA 90 bp TGGAGACTTGGTCAGTGTCATTCACTGCCCATTTATCATGTGGAACAACTACTAAATGGAACCTCTGACTaGATTTGTCCAGACTTTTGG +
Preference number: 5 (lower is better)
Translates to: WRLGQCHSLPIYHVEQLLNGTSD*ICPDFW
Trigger: CCAAAAGTCTGGACAAATCAAGTCAGAGGTTCCATT...TAGTAGTTGTTCCACATGATAAATGGGCAGTGAATGACACTGACCAAGTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CAA 90 bp GTGTCATTCACTGCCCATTTATCATGTGGAACAACTACTAGACACATACCTGGTATATTGAGCTTCTGTTaGGTTTGGCTGAGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: VSFTAHLSCGTTTRHIPGILSFC*VWLRVV
Trigger: CACAACTCTCAGCCAAACCAAACAGAAGCTCAATAT...ACCAGGTATGTGTCTAGTAGTTGTTCCACATGATAAATGGGCAGTGAATGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCGCTTCTTGAGGTTGTaGATGAAGGTCTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCRFLRL*MKVSSL
Trigger: CAATGAGGAGACCTTCATCAACAACCTCAAGAAGCG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCGCTTCTTGAGGTTGTaGATGAAGGTCTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIRFLRL*MKVSSL
Trigger: CAATGAGGAGACCTTCATCAACAACCTCAAGAAGCG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAAGCGCTTCTTGAGGTaGTTGATGAAGGTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIKRFLR*LMKVSS
Trigger: TGAGGAGACCTTCATCAACAACCTCAAGAAGCGCTT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAAGCGCTTCTTGAGGTaGTTGATGAAGGTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCKRFLR*LMKVSS
Trigger: TGAGGAGACCTTCATCAACAACCTCAAGAAGCGCTT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTGGTCAAAGCGCTTCTaGAGGTTGTTGATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCWSKRF*RLLMKV
Trigger: GACCTTCATCAACAACCTCAAGAAGCGCTTTGACCA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTGGTCAAAGCGCTTCTaGAGGTTGTTGATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIWSKRF*RLLMKV
Trigger: GACCTTCATCAACAACCTCAAGAAGCGCTTTGACCA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCACACTAGAGCCTCGTaGAAGATGTGTGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCHTRAS*KMCAAF
Trigger: AAAAGCAGCACACATCTTCAACGAGGCTCTAGTGTG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCACACTAGAGCCTCGTaGAAGATGTGTGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIHTRAS*KMCAAF
Trigger: AAAAGCAGCACACATCTTCAACGAGGCTCTAGTGTG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCTGCTGGTACCTCTTTaGTTGCGCATATCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCLLVPL*LRISPV
Trigger: TACAGGAGATATGCGCAACAAAAGAGGTACCAGCAG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCTGCTGGTACCTCTTTaGTTGCGCATATCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILLVPL*LRISPV
Trigger: TACAGGAGATATGCGCAACAAAAGAGGTACCAGCAG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCTAAGGCGGAACTCTTaGTCTGCTGGTACCTCTTTT +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILRRNS*SAGTSF
Trigger: AAAAGAGGTACCAGCAGACAAAGAGTTCCGCCTTAG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGAGCTCATTGATACCTaGGTCACATCCACCAATGGA +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIELIDT*VTSTNG
Trigger: TCCATTGGTGGATGTGACCAAGGTATCAATGAGCTC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGAGCTCATTGATACCTaGGTCACATCCACCAATGGA +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCELIDT*VTSTNG
Trigger: TCCATTGGTGGATGTGACCAAGGTATCAATGAGCTC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGAGCTTCTGTTTGGTTaGGCTGAGAGTTGTGCGATA +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIELLFG*AESCAI
Trigger: TATCGCACAACTCTCAGCCAAACCAAACAGAAGCTC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGAGCTTCTGTTTGGTTaGGCTGAGAGTTGTGCGATA +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCELLFG*AESCAI
Trigger: TATCGCACAACTCTCAGCCAAACCAAACAGAAGCTC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGAAACTTTCTCCTGTTaGGCCTCAACTGTTCGGAAA +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCETFSC*ASTVRK
Trigger: TTTCCGAACAGTTGAGGCCAAACAGGAGAAAGTTTC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GTGTCATTCACTGCCCATTTATCATGTGGAACAACTACTAGACACATACCTGGTTTGAGTTTCTTATACTaGGGGTTCTTGTTGATTTCC +
Preference number: 5 (lower is better)
Translates to: VSFTAHLSCGTTTRHIPGLSFLY*GFLLIS
Trigger: GGAAATCAACAAGAACCCCAAGTATAAGAAACTCAA...ACCAGGTATGTGTCTAGTAGTTGTTCCACATGATAAATGGGCAGTGAATGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS CCA 90 bp TCCTGTATTCTCTACGTACCTTTAAAAAGAAGATGTAGGTTACAGTaGTTAATGTGTGGCTGGTACAGGTCCATAATGATACACCTCTAT +
Preference number: 5 (lower is better)
Translates to: SCILYVPLKRRCRLQ*LMCGWYRSIMIHLY
Trigger: ATAGAGGTGTATCATTATGGACCTGTACCAGCCACACATTAACCACTGTAACCTACATCTTCTTTTTAAAGGTACGTAGAGAATACAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461714.1
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCCAACTCCAATCATATaGTCCAGAAGTGAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIPTPII*SRSEVF
Trigger: GAAAACCTCACTTCTGGACAATATGATTGGAGTTGG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTATGAAGGTCTCCTCATaGAGAGGTTCTAAAAGAACC +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIMKVSS*RGSKRT
Trigger: GGTTCTTTTAGAACCTCTCAATGAGGAGACCTTCAT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTCAAGCTTAAGTTTATaGAGGAGCTCTTCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCSSLSL*RSSSEA
Trigger: TGCCTCTGAAGAGCTCCTCAATAAACTTAAGCTTGA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAACTGCTCAAAGCTGTaGTCCTCGAAAATCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTINCSKL*SSKISK
Trigger: CTTTGAGATTTTCGAGGACAACAGCTTTGAGCAGTT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAACTGCTCAAAGCTGTaGTCCTCGAAAATCTCAAAG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCNCSKL*SSKISK
Trigger: CTTTGAGATTTTCGAGGACAACAGCTTTGAGCAGTT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAGAAGGTCATTGTTTTaGTCAACGAATCCTTCCACC +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIRRSLF*STNPST
Trigger: GGTGGAAGGATTCGTTGACAAAAACAATGACCTTCT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGCCAATTCTTGTCTATaGGAGATAAGGAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIANSCL*EIRKAS
Trigger: AGATGCCTTCCTTATCTCCAATAGACAAGAATTGGC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGCCAATTCTTGTCTATaGGAGATAAGGAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCANSCL*EIRKAS
Trigger: AGATGCCTTCCTTATCTCCAATAGACAAGAATTGGC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGATTTGTCCAGACTTTaGGTCAGCAAGAAGGAGATT +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIDLSRL*VSKKEI
Trigger: AATCTCCTTCTTGCTGACCAAAAGTCTGGACAAATC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGATTTGTCCAGACTTTaGGTCAGCAAGAAGGAGATT +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCDLSRL*VSKKEI
Trigger: AATCTCCTTCTTGCTGACCAAAAGTCTGGACAAATC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAATGGAACCTCTGACTaGATTTGTCCAGACTTTTGG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCNGTSD*ICPDFW
Trigger: CCAAAAGTCTGGACAAATCAAGTCAGAGGTTCCATT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAATGGAACCTCTGACTaGATTTGTCCAGACTTTTGG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTINGTSD*ICPDFW
Trigger: CCAAAAGTCTGGACAAATCAAGTCAGAGGTTCCATT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCATTTTGTGAGCTCATaGATACCTTGGTCACATCCA +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIHFVSS*IPWSHP
Trigger: TGGATGTGACCAAGGTATCAATGAGCTCACAAAATG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTATATTGAGCTTCTGTTaGGTTTGGCTGAGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIILSFC*VWLRVV
Trigger: CACAACTCTCAGCCAAACCAAACAGAAGCTCAATAT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTATATTGAGCTTCTGTTaGGTTTGGCTGAGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCILSFC*VWLRVV
Trigger: CACAACTCTCAGCCAAACCAAACAGAAGCTCAATAT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAACTTCACACATACTTaGTCCTGTCTGAACTGTACC +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTINFTHT*SCLNCT
Trigger: GGTACAGTTCAGACAGGACAAAGTATGTGTGAAGTT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCCAAATCTAGAGGAGTaGTCATTCCTTACAGTTTTG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCPNLEE*SFLTVL
Trigger: CAAAACTGTAAGGAATGACAACTCCTCTAGATTTGG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCCAAATCTAGAGGAGTaGTCATTCCTTACAGTTTTG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIPNLEE*SFLTVL
Trigger: CAAAACTGTAAGGAATGACAACTCCTCTAGATTTGG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAGAATAAGTAAGGTCTaGAGGGCCAATTCTTGTCTA +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIRISKV*RANSCL
Trigger: TAGACAAGAATTGGCCCTCAAGACCTTACTTATTCT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTCTTCAATGGCATCTTaGAGTTTCTTATACTTGGGG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISSMAS*SFLYLG
Trigger: CCCCAAGTATAAGAAACTCAAAGATGCCATTGAAGA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTCTTCAATGGCATCTTaGAGTTTCTTATACTTGGGG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCSSMAS*SFLYLG
Trigger: CCCCAAGTATAAGAAACTCAAAGATGCCATTGAAGA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTAGCACGGTTAATTTaGTTCACGACTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILARLI*FTTSAM
Trigger: CATTGCTGAAGTCGTGAACAAAATTAACCGTGCTAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTTAGCACGGTTAATTTaGTTCACGACTTCAGCAATG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCLARLI*FTTSAM
Trigger: CATTGCTGAAGTCGTGAACAAAATTAACCGTGCTAA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTCGGAAATCTCAATATaGAGCTTCTGTTTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISEISI*SFCLVW
Trigger: CCAAACCAAACAGAAGCTCAATATTGAGATTTCCGA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTAGTAATGAGAATACATaGGTCCTTATCTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTISNENT*VLILIS
Trigger: CGAGATCAAGATAAGGACCAATGTATTCTCATTACT...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTAGTAATGAGAATACATaGGTCCTTATCTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCSNENT*VLILIS
Trigger: CGAGATCAAGATAAGGACCAATGTATTCTCATTACT...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGCCTTAATGCTTTCATaGATTCGATTTACCAACCAT +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCALMLS*IRFTNH
Trigger: ATGGTTGGTAAATCGAATCAATGAAAGCATTAAGGC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGCCTTAATGCTTTCATaGATTCGATTTACCAACCAT +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIALMLS*IRFTNH
Trigger: ATGGTTGGTAAATCGAATCAATGAAAGCATTAAGGC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTGGCCAGGATTCCATTaGTGTTATTTTCTATTAGGT +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIWPGFH*CYFLLG
Trigger: ACCTAATAGAAAATAACACAAATGGAATCCTGGCCA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTCCAATGAGGCCATGTTaGTTTACAAAGCATTTTGTA +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCPMRPC*FTKHFV
Trigger: TACAAAATGCTTTGTAAACAAACATGGCCTCATTGG...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTCCAATGAGGCCATGTTaGTTTACAAAGCATTTTGTA +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIPMRPC*FTKHFV
Trigger: TACAAAATGCTTTGTAAACAAACATGGCCTCATTGG...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTTCCAAGAAGTATTTTaGCACAATTCTCTGAAGCGT +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCFQEVF*HNSLKR
Trigger: ACGCTTCAGAGAATTGTGCAAAAATACTTCTTGGAA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTCCAAGAAGTATTTTaGCACAATTCTCTGAAGCGT +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIFQEVF*HNSLKR
Trigger: ACGCTTCAGAGAATTGTGCAAAAATACTTCTTGGAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTGAGTTTCTTATACTaGGGGTTCTTGTTGATTTCC +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTILSFLY*GFLLIS
Trigger: GGAAATCAACAAGAACCCCAAGTATAAGAAACTCAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp TTTCATCATTTTATTTGTACATACTGGTCTCTTCCACTAGGATGTCAGGTACATTCTTCAATGGCATCTTaGAGTTTCTTATACTTGGGG +
Preference number: 5 (lower is better)
Translates to: FHHFICTYWSLPLGCQVHSSMAS*SFLYLG
Trigger: CCCCAAGTATAAGAAACTCAAAGATGCCATTGAAGA...ATGTACCTGACATCCTAGTGGAAGAGACCAGTATGTACAAATAAAATGATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTGAAGGAGATTATTGTTaGTTAAGAGGAAAATCCGAG +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIEGDYC*LRGKSE
Trigger: CTCGGATTTTCCTCTTAACAAACAATAATCTCCTTC...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTGAAGGAGATTATTGTTaGTTAAGAGGAAAATCCGAG +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCEGDYC*LRGKSE
Trigger: CTCGGATTTTCCTCTTAACAAACAATAATCTCCTTC...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp GGGTTCCTAATAATGCTGTCCATCATTAACAGTTATTGTTTTGGTCTCACCATTTTTTTCGTTTACATGTaGGGACACTCCCATTTTTCT +
Preference number: 5 (lower is better)
Translates to: GFLIMLSIINSYCFGLTIFFVYM*GHSHFS
Trigger: AGAAAAATGGGAGTGTCCCAACATGTAAACGAAAAA...AATGGTGAGACCAAAACAATAACTGTTAATGATGGACAGCATTATTAGGAACCC
37% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS-3UTR CAA 90 bp CAGAATGTTTTACTGCTATCTGAATGGCTTTTAGCCCTTTACTTTGTTAGGTGTTTTTTCGTTTACATGTaGGGACACTCCCATTTTTCT +
Preference number: 5 (lower is better)
Translates to: QNVLLLSEWLLALYFVRCFFVYM*GHSHFS
Trigger: AGAAAAATGGGAGTGTCCCAACATGTAAACGAAAAA...ACACCTAACAAAGTAAAGGGCTAAAAGCCATTCAGATAGCAGTAAAACATTCTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS GCA 72 bp CACGCGCCGCGGTTGAGGCTCCCGTGCGCACCCAGCTaGGGAGTGCTCAGCGGCGGCGGGAGGAGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: HAPRLRLPCAPS*GVLSGGGRSPA
Trigger: GGCCGGGCTCCTCCCGCCGCCGCTGAGCACTCCGCAGCTGGGTGCGCACGGGAGCCTCAACCGCGGCGCGTG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS GCA 72 bp GGCTGCCGGCCGACTGCGCGCCGCGCGCTCTGGTACTaGCTCCACGCGCCGCGGTTGAGGCTCCCGTGCGCA +
Preference number: 6 (lower is better)
Translates to: GCRPTARRALWY*LHAPRLRLPCA
Trigger: TGCGCACGGGAGCCTCAACCGCGGCGCGTGGAGGCAGTACCAGAGCGCGCGGCGCGCAGTCGGCCGGCAGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS GCA 72 bp CCCGCCGCGGCTGTTCTGCCAAGGCTGTCCCGCGGCTaGCGGCCGACTGCGCGCCGCGCGCTCTGGTACTGC +
Preference number: 6 (lower is better)
Translates to: PAAAVLPRLSRG*RPTARRALWYC
Trigger: GCAGTACCAGAGCGCGCGGCGCGCAGTCGGCCGGCAGCCGCGGGACAGCCTTGGCAGAACAGCCGCGGCGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS CAA 90 bp CCGACTGCGCGCCGCGCGCTCTGGTACTGCCTCCACGCGCCGCGGTaGAGGCTCCCGTGCGCACCCAGCTGCGGAGTGCTCAGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: PTARRALWYCLHAPR*RLPCAPSCGVLSGG
Trigger: GCCGCCGCTGAGCACTCCGCAGCTGGGTGCGCACGGGAGCCTCAACCGCGGCGCGTGGAGGCAGTACCAGAGCGCGCGGCGCGCAGTCGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS GCA 72 bp TGGTACTGCCTCCACGCGCCGCGGTTGAGGCTCCCGTaGGCACCCAGCTGCGGAGTGCTCAGCGGCGGCGGG +
Preference number: 6 (lower is better)
Translates to: WYCLHAPRLRLP*APSCGVLSGGG
Trigger: CCCGCCGCCGCTGAGCACTCCGCAGCTGGGTGCGCACGGGAGCCTCAACCGCGGCGCGTGGAGGCAGTACCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS GCA 72 bp TGTTCTGCCAAGGCTGTCCCGCGGCTGCCGGCCGACTaGGCGCCGCGCGCTCTGGTACTGCCTCCACGCGCC +
Preference number: 6 (lower is better)
Translates to: CSAKAVPRLPAD*APRALVLPPRA
Trigger: GGCGCGTGGAGGCAGTACCAGAGCGCGCGGCGCGCAGTCGGCCGGCAGCCGCGGGACAGCCTTGGCAGAACA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS CAA 72 bp CGCCGCGCGCTCTGGTACTGCCTCCACGCGCCGCGGTaGAGGCTCCCGTGCGCACCCAGCTGCGGAGTGCTC +
Preference number: 6 (lower is better)
Translates to: RRALWYCLHAPR*RLPCAPSCGVL
Trigger: GAGCACTCCGCAGCTGGGTGCGCACGGGAGCCTCAACCGCGGCGCGTGGAGGCAGTACCAGAGCGCGCGGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS TCA 72 bp GCCGCGCGCTCTGGTACTGCCTCCACGCGCCGCGGTTaGGGCTCCCGTGCGCACCCAGCTGCGGAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: AARSGTASTRRG*GSRAHPAAECS
Trigger: TGAGCACTCCGCAGCTGGGTGCGCACGGGAGCCTCAACCGCGGCGCGTGGAGGCAGTACCAGAGCGCGCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS GCA 72 bp ACTGTGGCCCAGCACACGGCTCCTAGGACAGACGCTTaGCCATTGCAGGCACTCGAGGAGTGGGTCATGAGT +
Preference number: 6 (lower is better)
Translates to: TVAQHTAPRTDA*PLQALEEWVMS
Trigger: ACTCATGACCCACTCCTCGAGTGCCTGCAATGGGCAAGCGTCTGTCCTAGGAGCCGTGTGCTGGGCCACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494129.1
CDS CCA 72 bp TCATATTGTCCAGAAGTGAGGTTTTCACCTCCATTTTaGCCATGGTCTCCAGCTCGCCGGGCGCCACTCCGC +
Preference number: 6 (lower is better)
Translates to: SYCPEVRFSPPF*PWSPARRAPLR
Trigger: GCGGAGTGGCGCCCGGCGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAACCTCACTTCTGGACAATATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304164.8
CDS CCA 72 bp TCATATTGTCCAGAAGTGAGGTTTTCACCTCCATTTTaGCCATGGTCTCCAGCTCTGTCCGCCCGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: SYCPEVRFSPPF*PWSPALSARCR
Trigger: CCGGCACCGGGCGGACAGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAACCTCACTTCTGGACAATATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418908.5
CDS CAA 72 bp ATCATATTGTCCAGAAGTGAGGTTTTCACCTCCATTTaGGCCATGGTCTCCAGCTCGCCGGGCGCCACTCCG +
Preference number: 6 (lower is better)
Translates to: IILSRSEVFTSI*AMVSSSPGATP
Trigger: CGGAGTGGCGCCCGGCGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAACCTCACTTCTGGACAATATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304164.8
CDS CAA 90 bp GCCTTGAACTGTGAGCCTGCTGTAGGAGGCCTTTTCAGGTTGATCTaGGCGGGATTCCCTTCGGGGAACAAAGACTTGATGAGGGCATGG +
Preference number: 6 (lower is better)
Translates to: ALNCEPAVGGLFRLI*AGFPSGNKDLMRAW
Trigger: CCATGCCCTCATCAAGTCTTTGTTCCCCGAAGGGAATCCCGCCAAGATCAACCTGAAAAGGCCTCCTACAGCAGGCTCACAGTTCAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000494129.1
CDS CAA 90 bp CCAACTCCAATCATATTGTCCAGAAGTGAGGTTTTCACCTCCATTTaGGCCATGGTCTCCAGCTCTGTCCGCCCGGTGCCGGCTTCACAG +
Preference number: 6 (lower is better)
Translates to: PTPIILSRSEVFTSI*AMVSSSVRPVPASQ
Trigger: CTGTGAAGCCGGCACCGGGCGGACAGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAACCTCACTTCTGGACAATATGATTGGAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418908.5
CDS TCA 72 bp ACTGCTGCCACCACCGCCAAGACAGACTCAGCTTCATaGTCCATAAAGCCCACAATCTGCATGGCATTCCGC +
Preference number: 6 (lower is better)
Translates to: TAATTAKTDSAS*SIKPTICMAFR
Trigger: GCGGAATGCCATGCAGATTGTGGGCTTTATGGATCATGAAGCTGAGTCTGTCTTGGCGGTGGTGGCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000451437.5
CDS TCA 72 bp TTTTGTATCTTTCTAGGCAAGGTTCATAGGCCTGCCTaGAGGCGTAGCCTGCCCTCCGCACTCGGACGTTCT +
Preference number: 6 (lower is better)
Translates to: FCIFLGKVHRPA*RRSLPSALGRS
Trigger: AGAACGTCCGAGTGCGGAGGGCAGGCTACGCCTTCAGGCAGGCCTATGAACCTTGCCTAGAAAGATACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS GCA 72 bp TCTCAGTTCCCTTCGTGCCTGGGTCCCATGCCAATATaGAGCAATGGTCGTGACTGCTTCCTTACAGCGCTT +
Preference number: 6 (lower is better)
Translates to: SQFPSCLGPMPI*SNGRDCFLTAL
Trigger: AAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTGGCATGGGACCCAGGCACGAAGGGAACTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304164.8
ENST00000392318.8
CDS CCA 72 bp TCATATTGTCCAGAAGTGAGGTTTTCACCTCCATTTTaGCCATGGTCTCCAGCTCGCCTGGCGCTACCTCGC +
Preference number: 6 (lower is better)
Translates to: SYCPEVRFSPPF*PWSPARLALPR
Trigger: GCGAGGTAGCGCCAGGCGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAACCTCACTTCTGGACAATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS CAA 90 bp ACGGATGCCTTGAACTGTGAGCCTGCTGTAGGAGGCCTTTTCAGGTaGATCTTGGCGGGATTCCCTTCGGGGAACAAAGACTTGATGAGG +
Preference number: 6 (lower is better)
Translates to: TDALNCEPAVGGLFR*ILAGFPSGNKDLMR
Trigger: CCTCATCAAGTCTTTGTTCCCCGAAGGGAATCCCGCCAAGATCAACCTGAAAAGGCCTCCTACAGCAGGCTCACAGTTCAAGGCATCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000494129.1
CDS TCA 72 bp AAGTGTGTGCGGCATTTCCACCCCCGATATATCTTCTaGATGAGAGTGGCCAAGTCCTCCAGGCGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: KCVRHFHPRYIF*MRVAKSSRRCF
Trigger: GAAGCAACGCCTGGAGGACTTGGCCACTCTCATTCAGAAGATATATCGGGGGTGGAAATGCCGCACACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS GCA 72 bp GGGCTTGAACTCAATGTTCCCCAGTTTCAACACTGCTaGCACCACCGCCAAGACAGACTCAGCTTCATGATC +
Preference number: 6 (lower is better)
Translates to: GLELNVPQFQHC*HHRQDRLSFMI
Trigger: GATCATGAAGCTGAGTCTGTCTTGGCGGTGGTGGCAGCAGTGTTGAAACTGGGGAACATTGAGTTCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000451437.5
CDS GCA 72 bp TTCGGGCTTGAACTCAATGTTCCCCAGTTTCAACACTaGTGCCACCACCGCCAAGACAGACTCAGCTTCATG +
Preference number: 6 (lower is better)
Translates to: FGLELNVPQFQH*CHHRQDRLSFM
Trigger: CATGAAGCTGAGTCTGTCTTGGCGGTGGTGGCAGCAGTGTTGAAACTGGGGAACATTGAGTTCAAGCCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000451437.5
CDS GCA 72 bp CTGGGTCCCATGCCAATATGCAGCAATGGTCGTGACTaGTTCCTTACAGCGCTTTTGATGCTTCAGTTCCCG +
Preference number: 6 (lower is better)
Translates to: LGPMPICSNGRD*FLTALLMLQFP
Trigger: CGGGAACTGAAGCATCAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTGGCATGGGACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS CAA 72 bp TGTGAGCCTGCTGTAGGAGGCCTTTTCAGGTTGATCTaGGCGGGATTCCCTTCGGGGAACAAAGACTTGATG +
Preference number: 6 (lower is better)
Translates to: CEPAVGGLFRLI*AGFPSGNKDLM
Trigger: CATCAAGTCTTTGTTCCCCGAAGGGAATCCCGCCAAGATCAACCTGAAAAGGCCTCCTACAGCAGGCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000494129.1
CDS CAA 72 bp TTGAACTGTGAGCCTGCTGTAGGAGGCCTTTTCAGGTaGATCTTGGCGGGATTCCCTTCGGGGAACAAAGAC +
Preference number: 6 (lower is better)
Translates to: LNCEPAVGGLFR*ILAGFPSGNKD
Trigger: GTCTTTGTTCCCCGAAGGGAATCCCGCCAAGATCAACCTGAAAAGGCCTCCTACAGCAGGCTCACAGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000494129.1
CDS CAA 72 bp ATCATATTGTCCAGAAGTGAGGTTTTCACCTCCATTTaGGCCATGGTCTCCAGCTCGCCTGGCGCTACCTCG +
Preference number: 6 (lower is better)
Translates to: IILSRSEVFTSI*AMVSSSPGATS
Trigger: CGAGGTAGCGCCAGGCGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAACCTCACTTCTGGACAATATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339514.8
ENST00000392318.8
CDS GCA 72 bp CCTGTATTCTCTACGTACCTGGGTCCCATGCCAATATaGAGCAATGGTCGTGACTGCTTCCTTACAGCGCTT +
Preference number: 6 (lower is better)
Translates to: PVFSTYLGPMPI*SNGRDCFLTAL
Trigger: AAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTGGCATGGGACCCAGGTACGTAGAGAATACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339514.8
CDS GCA 72 bp TTTCAATTCCCTTCGAGCCTGGGTCCCATGCCAATATaGAGCAATGGTCGTGACTGCTTCCTTACAGCGCTT +
Preference number: 6 (lower is better)
Translates to: FQFPSSLGPMPI*SNGRDCFLTAL
Trigger: AAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTGGCATGGGACCCAGGCTCGAAGGGAATTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392316.5
CDS CCA 72 bp TCATATTGTCCAGAAGTGAGGTTTTCACCTCCATTTTaGCCATGGTCTCCAGCTCTCCAGCGCGCTCTCATC +
Preference number: 6 (lower is better)
Translates to: SYCPEVRFSPPF*PWSPALQRALI
Trigger: GATGAGAGCGCGCTGGAGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAACCTCACTTCTGGACAATATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438652.5
CDS CAA 90 bp ATGCCAATATGCAGCAATGGTCGTGACTGCTTCCTTACAGCGCTTTaGATGCTTCAGTTCCCGCAGAATTTTTCGAGCCTTCCAACCCCG +
Preference number: 6 (lower is better)
Translates to: MPICSNGRDCFLTAL*MLQFPQNFSSLPTP
Trigger: CGGGGTTGGAAGGCTCGAAAAATTCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCATATTGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 72 bp GCAGCAATGGTCGTGACTGCTTCCTTACAGCGCTTTTaGTGCTTCAGTTCCCGCAGAATTTTTCGAGCCTTC +
Preference number: 6 (lower is better)
Translates to: AAMVVTASLQRF*CFSSRRIFRAF
Trigger: GAAGGCTCGAAAAATTCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS GCA 72 bp AGGAACCGAGAGCACTTGCTCATCCTGCTCTCAAAATaGTGGTGGGTGGCACATACTTGGTTCAGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: RNREHLLILLSK*WWVAHTWFSFS
Trigger: AGAAAAGCTGAACCAAGTATGTGCCACCCACCAGCATTTTGAGAGCAGGATGAGCAAGTGCTCTCGGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000494129.1
ENST00000634375.1
CDS CAA 72 bp ATCATATTGTCCAGAAGTGAGGTTTTCACCTCCATTTaGGCCATGGTCTCCAGCTCTCCAGCGCGCTCTCAT +
Preference number: 6 (lower is better)
Translates to: IILSRSEVFTSI*AMVSSSPARSH
Trigger: ATGAGAGCGCGCTGGAGAGCTGGAGACCATGGCCAAAATGGAGGTGAAAACCTCACTTCTGGACAATATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438652.5
CDS TCA 72 bp GAGAGTCCATCATGGATACATGCTGGACTCTTCTGTTaGCAACCTCCCACTCTGACCCATGCTACTGGTATA +
Preference number: 6 (lower is better)
Translates to: ESPSWIHAGLFC*QPPTLTHATGI
Trigger: TATACCAGTAGCATGGGTCAGAGTGGGAGGTTGTCAACAGAAGAGTCCAGCATGTATCCATGATGGACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451437.5
CDS TCA 72 bp TCTCTGTCACCAAGTTCTGAATCTCCCATTCTCAGGTaGAACTTCAGAGCTCAAGGAAGTCCCCCTGAACTG +
Preference number: 6 (lower is better)
Translates to: SLSPSSESPILR*NFRAQGSPPEL
Trigger: CAGTTCAGGGGGACTTCCTTGAGCTCTGAAGTTTCACCTGAGAATGGGAGATTCAGAACTTGGTGACAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494129.1
CDS TCA 72 bp CACTCAGACATCTCAATCCATGAGAAATGCCACACATaGTCTCTCAGATTTAACTGTGGCCCAGCACACGGC +
Preference number: 6 (lower is better)
Translates to: HSDISIHEKCHT*SLRFNCGPAHG
Trigger: GCCGTGTGCTGGGCCACAGTTAAATCTGAGAGATCATGTGTGGCATTTCTCATGGATTGAGATGTCTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494129.1
CDS CCA 72 bp AACCGAGAGCACTTGCTCATCCTGCTCTCAAAATGCTaGTGGGTGGCACATACTTGGTTCAGCTTTTCTAAG +
Preference number: 6 (lower is better)
Translates to: NREHLLILLSKC*WVAHTWFSFSK
Trigger: CTTAGAAAAGCTGAACCAAGTATGTGCCACCCACCAGCATTTTGAGAGCAGGATGAGCAAGTGCTCTCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000494129.1
ENST00000634375.1
CDS CAA 72 bp TGCAGCAATGGTCGTGACTGCTTCCTTACAGCGCTTTaGATGCTTCAGTTCCCGCAGAATTTTTCGAGCCTT +
Preference number: 6 (lower is better)
Translates to: CSNGRDCFLTAL*MLQFPQNFSSL
Trigger: AAGGCTCGAAAAATTCTGCGGGAACTGAAGCATCAAAAGCGCTGTAAGGAAGCAGTCACGACCATTGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS CAA 90 bp TCTTTGATTTTGCTTTCATCTAGACCATTCACTCGAGATTCGGGCTaGAACTCAATGTTCCCCAGTTTCAACACTGCTGCCACCACCGCC +
Preference number: 6 (lower is better)
Translates to: SLILLSSRPFTRDSG*NSMFPSFNTAATTA
Trigger: GGCGGTGGTGGCAGCAGTGTTGAAACTGGGGAACATTGAGTTCAAGCCCGAATCTCGAGTGAATGGTCTAGATGAAAGCAAAATCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000451437.5
CDS CAA 90 bp CCTTCCAACCCCGGATATAAGACTGAATTACTAAGGCGGAACTCTTaGTCTGCTGGTACCTCTTTTGTTGCGCATATCTCCTGTACCAGG +
Preference number: 6 (lower is better)
Translates to: PSNPGYKTELLRRNS*SAGTSFVAHISCTR
Trigger: CCTGGTACAGGAGATATGCGCAACAAAAGAGGTACCAGCAGACAAAGAGTTCCGCCTTAGTAATTCAGTCTTATATCCGGGGTTGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 72 bp TGCTTTCATCTAGACCATTCACTCGAGATTCGGGCTTaGACTCAATGTTCCCCAGTTTCAACACTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: CFHLDHSLEIRA*TQCSPVSTLLP
Trigger: TGGCAGCAGTGTTGAAACTGGGGAACATTGAGTTCAAGCCCGAATCTCGAGTGAATGGTCTAGATGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000451437.5
CDS GCA 72 bp AATCTGCATGGCATTCCGCACGGTTCTAAAATTTGCTaGATCATCCACTCCATTCACTTTGGCCGAATCCAG +
Preference number: 6 (lower is better)
Translates to: NLHGIPHGSKIC*IIHSIHFGRIQ
Trigger: CTGGATTCGGCCAAAGTGAATGGAGTGGATGATGCAGCAAATTTTAGAACCGTGCGGAATGCCATGCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000451437.5
CDS GCA 72 bp CACAATCTGCATGGCATTCCGCACGGTTCTAAAATTTaGTGCATCATCCACTCCATTCACTTTGGCCGAATC +
Preference number: 6 (lower is better)
Translates to: HNLHGIPHGSKI*CIIHSIHFGRI
Trigger: GATTCGGCCAAAGTGAATGGAGTGGATGATGCAGCAAATTTTAGAACCGTGCGGAATGCCATGCAGATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000451437.5
CDS CAA 72 bp TTGCTTTCATCTAGACCATTCACTCGAGATTCGGGCTaGAACTCAATGTTCCCCAGTTTCAACACTGCTGCC +
Preference number: 6 (lower is better)
Translates to: LLSSRPFTRDSG*NSMFPSFNTAA
Trigger: GGCAGCAGTGTTGAAACTGGGGAACATTGAGTTCAAGCCCGAATCTCGAGTGAATGGTCTAGATGAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000451437.5
CDS CAA 72 bp ATCATATTGTCCAGAAGTGAGGTTTTCACCTCCATTTaGGCCATGGTCTCCAGCTTGACCACGTATGGAGCA +
Preference number: 6 (lower is better)
Translates to: IILSRSEVFTSI*AMVSSLTTYGA
Trigger: TGCTCCATACGTGGTCAAGCTGGAGACCATGGCCAAAATGGAGGTGAAAACCTCACTTCTGGACAATATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420448.1
CDS TCA 72 bp ACGGGCATAATAAGCCTGAGCCACATTCAGTGTAGTTaGAACTTTCTCCTGTTTGGCCTCAACTGTTCGGAA +
Preference number: 6 (lower is better)
Translates to: TGIISLSHIQCS*NFLLFGLNCSE
Trigger: TTCCGAACAGTTGAGGCCAAACAGGAGAAAGTTTCAACTACACTGAATGTGGCTCAGGCTTATTATGCCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 72 bp AGGACCTCCACACCAGACCTGGCTGGTCCTTTCCAATaGGGCCATGTTTGTTTACAAAGCATTTTGTATCTT +
Preference number: 6 (lower is better)
Translates to: RTSTPDLAGPFQ*GHVCLQSILYL
Trigger: AAGATACAAAATGCTTTGTAAACAAACATGGCCTCATTGGAAAGGACCAGCCAGGTCTGGTGTGGAGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 72 bp CTCACTTCCTTTGCTGAAGGATCAGCAAAGACACAGTaGGCTCCACAATCTCTGTCACCAAGTTCTGAATCT +
Preference number: 6 (lower is better)
Translates to: LTSFAEGSAKTQ*APQSLSPSSES
Trigger: AGATTCAGAACTTGGTGACAGAGATTGTGGAGCTCACTGTGTCTTTGCTGATCCTTCAGCAAAGGAAGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494129.1
CDS GCA 72 bp ATTGGTGTCAGGCTGGTGCAGCGCTTATATTTTCAGTaGACTGAGATTCTGTTCCAGAGAAGGACAATCTGT +
Preference number: 6 (lower is better)
Translates to: IGVRLVQRLYFQ*TEILFQRRTIC
Trigger: ACAGATTGTCCTTCTCTGGAACAGAATCTCAGTGCACTGAAAATATAAGCGCTGCACCAGCCTGACACCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490069.1
CDS CCA 72 bp ATCCTGCTCTCAAAATGCTGGTGGGTGGCACATACTTaGTTCAGCTTTTCTAAGAAGGTCTCATCAGTGACT +
Preference number: 6 (lower is better)
Translates to: ILLSKCWWVAHT*FSFSKKVSSVT
Trigger: AGTCACTGATGAGACCTTCTTAGAAAAGCTGAACCAAGTATGTGCCACCCACCAGCATTTTGAGAGCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000494129.1
ENST00000634375.1
CDS CAA 72 bp CCCGGATATAAGACTGAATTACTAAGGCGGAACTCTTaGTCTGCTGGTACCTCTTTTGTTGCGCATATCTCC +
Preference number: 6 (lower is better)
Translates to: PGYKTELLRRNS*SAGTSFVAHIS
Trigger: GGAGATATGCGCAACAAAAGAGGTACCAGCAGACAAAGAGTTCCGCCTTAGTAATTCAGTCTTATATCCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS CAA 72 bp GATACCTTGGTCACATCCACCAATGGAACCTCTGACTaGATTTGTCCAGACTTTTGGTCAGCAAGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: DTLVTSTNGTSD*ICPDFWSARRR
Trigger: TCTCCTTCTTGCTGACCAAAAGTCTGGACAAATCAAGTCAGAGGTTCCATTGGTGGATGTGACCAAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000427152.1
ENST00000490069.1
CDS CAA 72 bp CTCATCGGAAATCTCAATATTGAGCTTCTGTTTGGTTaGGCTGAGAGTTGTGCGATAGAGCTTGGTGGCCAT +
Preference number: 6 (lower is better)
Translates to: LIGNLNIELLFG*AESCAIELGGH
Trigger: ATGGCCACCAAGCTCTATCGCACAACTCTCAGCCAAACCAAACAGAAGCTCAATATTGAGATTTCCGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000427152.1
ENST00000490069.1
CDS CAA 72 bp CCCCAAACAGAAAAGCTAGAAACAATCTCACTTCCTTaGCTGAAGGATCAGCAAAGACACAGTGAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: PQTEKLETISLP*LKDQQRHSELH
Trigger: GTGGAGCTCACTGTGTCTTTGCTGATCCTTCAGCAAAGGAAGTGAGATTGTTTCTAGCTTTTCTGTTTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494129.1
CDS CAA 90 bp TACCAGGAACTCATCGGAAATCTCAATATTGAGCTTCTGTTTGGTTaGGCTGAGAGTTGTGCGATAGAGCTTGGTGGCCATTTCAATCAG +
Preference number: 6 (lower is better)
Translates to: YQELIGNLNIELLFG*AESCAIELGGHFNQ
Trigger: CTGATTGAAATGGCCACCAAGCTCTATCGCACAACTCTCAGCCAAACCAAACAGAAGCTCAATATTGAGATTTCCGATGAGTTCCTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000490069.1
CDS CAA 90 bp AGAGAAGCACCCCAAACAGAAAAGCTAGAAACAATCTCACTTCCTTaGCTGAAGGATCAGCAAAGACACAGTGAGCTCCACAATCTCTGT +
Preference number: 6 (lower is better)
Translates to: REAPQTEKLETISLP*LKDQQRHSELHNLC
Trigger: ACAGAGATTGTGGAGCTCACTGTGTCTTTGCTGATCCTTCAGCAAAGGAAGTGAGATTGTTTCTAGCTTTTCTGTTTGGGGTGCTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494129.1
CDS TCA 72 bp AGGACCGGGTTGGACTGTAAAAGCTGTTCTTTAACTTaGTTAACTTCTGCTCCTTTTCCACAAACAGCTGCC +
Preference number: 6 (lower is better)
Translates to: RTGLDCKSCSLT*LTSAPFPQTAA
Trigger: GGCAGCTGTTTGTGGAAAAGGAGCAGAAGTTAATCAAGTTAAAGAACAGCTTTTACAGTCCAACCCGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000418908.5
ENST00000438652.5
ENST00000451437.5
ENST00000471904.1
CDS TCA 72 bp AAACTTTCTCCTGTTTGGCCTCAACTGTTCGGAAACTaGATGCTCGTTCTAGAACTGATTGATCAATGCCGG +
Preference number: 6 (lower is better)
Translates to: KLSPVWPQLFGN*MLVLELIDQCR
Trigger: CCGGCATTGATCAATCAGTTCTAGAACGAGCATTCAGTTTCCGAACAGTTGAGGCCAAACAGGAGAAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
CDS TCA 72 bp ATACCTTGGTCACATCCACCAATGGAACCTCTGACTTaGTTTGTCCAGACTTTTGGTCAGCAAGAAGGAGAT +
Preference number: 6 (lower is better)
Translates to: IPWSHPPMEPLT*FVQTFGQQEGD
Trigger: ATCTCCTTCTTGCTGACCAAAAGTCTGGACAAATCAAGTCAGAGGTTCCATTGGTGGATGTGACCAAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000427152.1
ENST00000490069.1
CDS GCA 72 bp TCATATAAAGTTGATCGAGAGTCCATCATGGATACATaGTGGACTCTTCTGTTGACAACCTCCCACTCTGAC +
Preference number: 6 (lower is better)
Translates to: SYKVDRESIMDT*WTLLLTTSHSD
Trigger: GTCAGAGTGGGAGGTTGTCAACAGAAGAGTCCAGCATGTATCCATGATGGACTCTCGATCAACTTTATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451437.5
CDS CAA 72 bp AAGCGCTTCTTGAGGTTGTTGATGAAGGTCTCCTCATaGAGAGGTTCTAAAAGAACCATATCCCCAACTCCA +
Preference number: 6 (lower is better)
Translates to: KRFLRLLMKVSS*RGSKRTISPTP
Trigger: TGGAGTTGGGGATATGGTTCTTTTAGAACCTCTCAATGAGGAGACCTTCATCAACAACCTCAAGAAGCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000418908.5
ENST00000420448.1
ENST00000438652.5
ENST00000451437.5
ENST00000471904.1
CDS CAA 72 bp CTGAACTGTACCAGGAACTCATCGGAAATCTCAATATaGAGCTTCTGTTTGGTTTGGCTGAGAGTTGTGCGA +
Preference number: 6 (lower is better)
Translates to: LNCTRNSSEISI*SFCLVWLRVVR
Trigger: TCGCACAACTCTCAGCCAAACCAAACAGAAGCTCAATATTGAGATTTCCGATGAGTTCCTGGTACAGTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000490069.1
CDS CAA 90 bp CTGTGGTCAAAGCGCTTCTTGAGGTTGTTGATGAAGGTCTCCTCATaGAGAGGTTCTAAAAGAACCATATCCCCAACTCCAATCATATTG +
Preference number: 6 (lower is better)
Translates to: LWSKRFLRLLMKVSS*RGSKRTISPTPIIL
Trigger: CAATATGATTGGAGTTGGGGATATGGTTCTTTTAGAACCTCTCAATGAGGAGACCTTCATCAACAACCTCAAGAAGCGCTTTGACCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000418908.5
ENST00000420448.1
ENST00000438652.5
ENST00000451437.5
ENST00000471904.1
CDS CAA 90 bp ATGAACGTACTCATCGGAAATCTCAATATTGAGCTTCTGTTTGGTTaGGCTGAGAGTTGTGCGATAGAGCTTGGTGGCCATTTCAATCAG +
Preference number: 6 (lower is better)
Translates to: MNVLIGNLNIELLFG*AESCAIELGGHFNQ
Trigger: CTGATTGAAATGGCCACCAAGCTCTATCGCACAACTCTCAGCCAAACCAAACAGAAGCTCAATATTGAGATTTCCGATGAGTACGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427152.1
CDS TCA 72 bp CTTTCCCCAGTAATGAGAATACATTGGTCCTTATCTTaGTCTCGTAGGGATCTGTATGCTTCATCCGAAAGG +
Preference number: 6 (lower is better)
Translates to: LSPVMRIHWSLS*SRRDLYASSER
Trigger: CCTTTCGGATGAAGCATACAGATCCCTACGAGATCAAGATAAGGACCAATGTATTCTCATTACTGGGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000418908.5
ENST00000438652.5
ENST00000451437.5
ENST00000471904.1
CDS TCA 72 bp ACACTCTTTCACTCCCATATCAAAGCCTTCAAACTCTaGGTAACAGCCCTAATGATGTCATTAGACTCCCCT +
Preference number: 6 (lower is better)
Translates to: TLFHSHIKAFKL*VTALMMSLDSP
Trigger: AGGGGAGTCTAATGACATCATTAGGGCTGTTACTCAGAGTTTGAAGGCTTTGATATGGGAGTGAAAGAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490069.1
CDS CAA 90 bp GAGCTCATTGATACCTTGGTCACATCCACCAATGGAACCTCTGACTaGATTTGTCCAGACTTTTGGTCAGCAAGAAGGAGATTATTGTTT +
Preference number: 6 (lower is better)
Translates to: ELIDTLVTSTNGTSD*ICPDFWSARRRLLF
Trigger: AAACAATAATCTCCTTCTTGCTGACCAAAAGTCTGGACAAATCAAGTCAGAGGTTCCATTGGTGGATGTGACCAAGGTATCAATGAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000427152.1
ENST00000490069.1
CDS TCA 72 bp GAGGCAGCCTCAGCTTCCATACAGGGCTGTTTTATATaGGTTAATCATATAAAGTTGATCGAGAGTCCATCA +
Preference number: 6 (lower is better)
Translates to: EAASASIQGCFI*VNHIKLIESPS
Trigger: TGATGGACTCTCGATCAACTTTATATGATTAACTCATATAAAACAGCCCTGTATGGAAGCTGAGGCTGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451437.5
CDS CCA 72 bp ATTATAGTACTGAGACTGGGAAATGAACTCACTGGATaGAGAAATCTTAGCAAGACCCACCTAAGAGTCCTT +
Preference number: 6 (lower is better)
Translates to: IIVLRLGNELTG*RNLSKTHLRVL
Trigger: AAGGACTCTTAGGTGGGTCTTGCTAAGATTTCTCCATCCAGTGAGTTCATTTCCCAGTCTCAGTACTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490069.1
CDS CAA 90 bp ATGTATGTGTATATTTCACTGTGGTCAAAGCGCTTCTTGAGGTTGTaGATGAAGGTCTCCTCATTGAGAGGTTCTAAAAGAACCATATCC +
Preference number: 6 (lower is better)
Translates to: MYVYISLWSKRFLRL*MKVSSLRGSKRTIS
Trigger: GGATATGGTTCTTTTAGAACCTCTCAATGAGGAGACCTTCATCAACAACCTCAAGAAGCGCTTTGACCACAGTGAAATATACACATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000418908.5
ENST00000420448.1
ENST00000438652.5
ENST00000451437.5
ENST00000471904.1
CDS CAA 90 bp ACACTTCCAATGTATGTGTATATTTCACTGTGGTCAAAGCGCTTCTaGAGGTTGTTGATGAAGGTCTCCTCATTGAGAGGTTCTAAAAGA +
Preference number: 6 (lower is better)
Translates to: TLPMYVYISLWSKRF*RLLMKVSSLRGSKR
Trigger: TCTTTTAGAACCTCTCAATGAGGAGACCTTCATCAACAACCTCAAGAAGCGCTTTGACCACAGTGAAATATACACATACATTGGAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000418908.5
ENST00000420448.1
ENST00000438652.5
ENST00000451437.5
ENST00000471904.1
CDS TCA 72 bp GAGTCCTTTTGCTTCTGCTATGACATTTCCCTCAGTTaGCTAGAGGAACAAGTTTGTTCTTCACAGATTTTC +
Preference number: 6 (lower is better)
Translates to: ESFCFCYDISLS*LEEQVCSSQIF
Trigger: GAAAATCTGTGAAGAACAAACTTGTTCCTCTAGTCAACTGAGGGAAATGTCATAGCAGAAGCAAAAGGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490069.1
CDS CAA 72 bp TATATTTCACTGTGGTCAAAGCGCTTCTTGAGGTTGTaGATGAAGGTCTCCTCATTGAGAGGTTCTAAAAGA +
Preference number: 6 (lower is better)
Translates to: YISLWSKRFLRL*MKVSSLRGSKR
Trigger: TCTTTTAGAACCTCTCAATGAGGAGACCTTCATCAACAACCTCAAGAAGCGCTTTGACCACAGTGAAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000418908.5
ENST00000420448.1
ENST00000438652.5
ENST00000451437.5
ENST00000471904.1
CDS CAA 72 bp ATCCGAGATGTACTCTTCCCATTAGCACGGTTAATTTaGTTCACGACTTCAGCAATGATGATCTTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: IRDVLFPLARLI*FTTSAMMIFSS
Trigger: TGAAGAAAAGATCATCATTGCTGAAGTCGTGAACAAAATTAACCGTGCTAATGGGAAGAGTACATCTCGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8
ENST00000427152.1
ENST00000490069.1
CDS TCA 72 bp ACTGTTCGGAAACTGAATGCTCGTTCTAGAACTGATTaGTCAATGCCGGTCAATTCACAAATTTCTTTTAAC +
Preference number: 6 (lower is better)
Translates to: TVRKLNARSRTD*SMPVNSQISFN
Trigger: GTTAAAAGAAATTTGTGAATTGACCGGCATTGATCAATCAGTTCTAGAACGAGCATTCAGTTTCCGAACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304164.8
ENST00000339514.8
ENST00000392316.5
ENST00000392318.8