RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO18B (Homo sapiens)

Ensembl gene IDs: ENSG00000133454

Ensembl transcript IDs: ENST00000335473.12, ENST00000407587.6, ENST00000418374.6, ENST00000534908.5, ENST00000536101.5, ENST00000536204.1, ENST00000539302.5, ENST00000539544.1, ENST00000540454.1, ENST00000543971.1

Found 1721 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGGCCGCCCGGTCCTTGCCCTGGTGCCGGGGGTTCTGGAAGCCTaGAGAGTCCACCACCATGATGGAGGCCATGGAGAGATGGTGGGA +
Preference number: 1 (lower is better)
Translates to: GGRPVLALVPGVLEA*RVHHHDGGHGEMVG
Trigger: TCCCACCATCTCTCCATGGCCTCCATCATGGTGGTGGACTCTCCAGGCTTCCAGAACCCCCGGCACCAGGGCAAGGACCGGGCGGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp AGGACCTGGGGTGCATCCAGGGCCGAGAGGTTGGGCTTGGCTCTGTaGAGCCAGCCCGTGAGGTCGTACCGCACAGGGTCCCATCCCAAC +
Preference number: 1 (lower is better)
Translates to: RTWGASRAERLGLAL*SQPVRSYRTGSHPN
Trigger: GTTGGGATGGGACCCTGTGCGGTACGACCTCACGGGCTGGCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGGATGCACCCCAGGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTaGCTCTGGCCACCGGGGAGGCCTGGCCAGTCTCTCTGTCTCCAA +
Preference number: 1 (lower is better)
Translates to: CLCGLISPLEGGHAG*LWPPGRPGQSLCLQ
Trigger: TTGGAGACAGAGAGACTGGCCAGGCCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
3UTR TCA 90 bp GTACTGGCTGCTCTCCCGCTGCTGGGACTCGGAGGTGGCCGCCTGTaGAAGCTCCTCCCCCATCTTGATCAGGCTGTCCCGAAGCCGGAT +
Preference number: 1 (lower is better)
Translates to: VLAALPLLGLGGGRL*KLLPHLDQAVPKPD
Trigger: ATCCGGCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGCTTTCACAGGCGGCCACCTCCGAGTCCCAGCAGCGGGAGAGCAGCCAGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp TCCTCAAAGGTGGCCGCCCGGTCCTTGCCCTGGTGCCGGGGGTTCTaGAAGCCTGGAGAGTCCACCACCATGATGGAGGCCATGGAGAGA +
Preference number: 1 (lower is better)
Translates to: SSKVAARSLPWCRGF*KPGESTTMMEAMER
Trigger: TCTCTCCATGGCCTCCATCATGGTGGTGGACTCTCCAGGCTTCCAGAACCCCCGGCACCAGGGCAAGGACCGGGCGGCCACCTTTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp TCCAGGGCCAGAGGTCCACCTGCCCCAGGCTTGTCTCTACCAGGCTaGGGTGGTGGTGGAGATTCCTGCCCACTCCTGCTTTCCACCACA +
Preference number: 1 (lower is better)
Translates to: SRARGPPAPGLSLPG*GGGGDSCPLLLSTT
Trigger: TGTGGTGGAAAGCAGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGTAGAGACAAGCCTGGGGCAGGTGGACCTCTGGCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp ACGCAGAGCCTCCAGGATGTGGAACCCAGCAAGCTGGACCCTCAGTaGTGGGATATCCAGGGCCAGAGGTCCACCTGCCCCAGGCTTGTC +
Preference number: 1 (lower is better)
Translates to: TQSLQDVEPSKLDPQ*WDIQGQRSTCPRLV
Trigger: GACAAGCCTGGGGCAGGTGGACCTCTGGCCCTGGATATCCCAGCACTGAGGGTCCAGCTTGCTGGGTTCCACATCCTGGAGGCTCTGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp GGCCAGAGGTCCACCTGCCCCAGGCTTGTCTCTACCAGGCTGCGGTaGTGGTGGAGATTCCTGCCCACTCCTGCTTTCCACCACAGGGTT +
Preference number: 1 (lower is better)
Translates to: GQRSTCPRLVSTRLR*WWRFLPTPAFHHRV
Trigger: AACCCTGTGGTGGAAAGCAGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGTAGAGACAAGCCTGGGGCAGGTGGACCTCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp TCCCGGAAGGCCTGTAGCCGCTCTGCCCGCTCACTCTCCAGCACCTaGCAGGCCACATCACCTTTGAAGCGCTCATCGGCAAGGTCAGAG +
Preference number: 1 (lower is better)
Translates to: SRKACSRSARSLSST*QATSPLKRSSARSE
Trigger: CTCTGACCTTGCCGATGAGCGCTTCAAAGGTGATGTGGCCTGCCAGGTGCTGGAGAGTGAGCGGGCAGAGCGGCTACAGGCCTTCCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp GACACCGCCTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTaGGTGTGGTCGGAGAGCTCAGTTTTCTCCCCATGCTCGGTCTGG +
Preference number: 1 (lower is better)
Translates to: DTASEDAVWATTACP*VWSESSVFSPCSVW
Trigger: CCAGACCGAGCATGGGGAGAAAACTGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAGGCGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 90 bp CATCCAGGGCCGAGAGGTTGGGCTTGGCTCTGTGGAGCCAGCCCGTaGGGTCGTACCGCACAGGGTCCCATCCCAACTGGTGGAAAATCT +
Preference number: 1 (lower is better)
Translates to: HPGPRGWAWLCGASP*GRTAQGPIPTGGKS
Trigger: AGATTTTCCACCAGTTGGGATGGGACCCTGTGCGGTACGACCTCACGGGCTGGCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp TTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATaGCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGC +
Preference number: 1 (lower is better)
Translates to: LFRPTTLGAQHPRRI*LCGLISPLEGGHAG
Trigger: GCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR GCA 90 bp GCCCCAGGCTTGTCTCTACCAGGCTGCGGTGGTGGTGGAGATTCCTaGCCACTCCTGCTTTCCACCACAGGGTTTGGTACCAGGCAGTGG +
Preference number: 1 (lower is better)
Translates to: APGLSLPGCGGGGDS*PLLLSTTGFGTRQW
Trigger: CCACTGCCTGGTACCAAACCCTGTGGTGGAAAGCAGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGTAGAGACAAGCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp AAGCTGGACCCTCAGTGCTGGGATATCCAGGGCCAGAGGTCCACCTaGCCCAGGCTTGTCTCTACCAGGCTGCGGTGGTGGTGGAGATTC +
Preference number: 1 (lower is better)
Translates to: KLDPQCWDIQGQRST*PRLVSTRLRWWWRF
Trigger: GAATCTCCACCACCACCGCAGCCTGGTAGAGACAAGCCTGGGGCAGGTGGACCTCTGGCCCTGGATATCCCAGCACTGAGGGTCCAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp CAGAGGTCCACCTGCCCCAGGCTTGTCTCTACCAGGCTGCGGTGGTaGTGGAGATTCCTGCCCACTCCTGCTTTCCACCACAGGGTTTGG +
Preference number: 1 (lower is better)
Translates to: QRSTCPRLVSTRLRW*WRFLPTPAFHHRVW
Trigger: CCAAACCCTGTGGTGGAAAGCAGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGTAGAGACAAGCCTGGGGCAGGTGGACCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp CAGAGCCTCCAGGATGTGGAACCCAGCAAGCTGGACCCTCAGTGCTaGGATATCCAGGGCCAGAGGTCCACCTGCCCCAGGCTTGTCTCT +
Preference number: 1 (lower is better)
Translates to: QSLQDVEPSKLDPQC*DIQGQRSTCPRLVS
Trigger: AGAGACAAGCCTGGGGCAGGTGGACCTCTGGCCCTGGATATCCCAGCACTGAGGGTCCAGCTTGCTGGGTTCCACATCCTGGAGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp GTCCTATGCAGACGCAGAGCCTCCAGGATGTGGAACCCAGCAAGCTaGACCCTCAGTGCTGGGATATCCAGGGCCAGAGGTCCACCTGCC +
Preference number: 1 (lower is better)
Translates to: VLCRRRASRMWNPAS*TLSAGISRARGPPA
Trigger: GGCAGGTGGACCTCTGGCCCTGGATATCCCAGCACTGAGGGTCCAGCTTGCTGGGTTCCACATCCTGGAGGCTCTGCGTCTGCATAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp TTTCTTCATTATGCTCGCAACATCGTCGTCTTTCCTCCCCGTCCCTaGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGC +
Preference number: 1 (lower is better)
Translates to: FLHYARNIVVFPPRP*LSPLGGRSLATVTR
Trigger: GCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGGACGGGGAGGAAAGACGACGATGTTGCGAGCATAATGAAGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 90 bp TCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGCGGAAGCGAGTaGGCCCCATGTGGTCAGCATAGCCTGTCCTATGCAGACGCAGAG +
Preference number: 1 (lower is better)
Translates to: SGVERPAPGIAGGSE*APCGQHSLSYADAE
Trigger: CTCTGCGTCTGCATAGGACAGGCTATGCTGACCACATGGGGCTCACTCGCTTCCGCCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 90 bp GCTGGGACTCGGAGGTGGCCGCCTGTGAAAGCTCCTCCCCCATCTTaGTCAGGCTGTCCCGAAGCCGGATCACCAGGACCTCAAATCTCT +
Preference number: 1 (lower is better)
Translates to: AGTRRWPPVKAPPPS*SGCPEAGSPGPQIS
Trigger: AGAGATTTGAGGTCCTGGTGATCCGGCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGCTTTCACAGGCGGCCACCTCCGAGTCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp ACAGGGTCCCATCCCAACTGGTGGAAAATCTCACACTGGAGGGGCTaGTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCT +
Preference number: 1 (lower is better)
Translates to: TGSHPNWWKISHWRG*SQVRRAEDPSVPAP
Trigger: AGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCTCCAGTGTGAGATTTTCCACCAGTTGGGATGGGACCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp TCCTCCAGTTCCTCCTCCTGGTCCTCACGGTCCTTCTGGTGCATCTaGTTCATCCGCTCGATCTCCAGCTCAAACCGCTGGCGGAGCTGC +
Preference number: 1 (lower is better)
Translates to: SSSSSSWSSRSFWCI*FIRSISSSNRWRSC
Trigger: GCAGCTCCGCCAGCGGTTTGAGCTGGAGATCGAGCGGATGAAGCAGATGCACCAGAAGGACCGTGAGGACCAGGAGGAGGAACTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp CGGACATCCTCCAGTTCCTCCTCCTGGTCCTCACGGTCCTTCTGGTaGATCTGCTTCATCCGCTCGATCTCCAGCTCAAACCGCTGGCGG +
Preference number: 1 (lower is better)
Translates to: RTSSSSSSWSSRSFW*ICFIRSISSSNRWR
Trigger: CCGCCAGCGGTTTGAGCTGGAGATCGAGCGGATGAAGCAGATGCACCAGAAGGACCGTGAGGACCAGGAGGAGGAACTGGAGGATGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp AGGTCCACCTGCCCCAGGCTTGTCTCTACCAGGCTGCGGTGGTGGTaGAGATTCCTGCCCACTCCTGCTTTCCACCACAGGGTTTGGTAC +
Preference number: 1 (lower is better)
Translates to: RSTCPRLVSTRLRWW*RFLPTPAFHHRVWY
Trigger: GTACCAAACCCTGTGGTGGAAAGCAGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGTAGAGACAAGCCTGGGGCAGGTGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp TCCTCCGGAGCCCTTCCACGAACTCCGAGAGGGCCGCTGAAGGACTaGGCAGCTTTTCCCTCGACAGCGGGGATGTATTTGTACTCCGAG +
Preference number: 1 (lower is better)
Translates to: SSGALPRTPRGPLKD*AAFPSTAGMYLYSE
Trigger: CTCGGAGTACAAATACATCCCCGCTGTCGAGGGAAAAGCTGCCCAGTCCTTCAGCGGCCCTCTCGGAGTTCGTGGAAGGGCTCCGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp GGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTTCCAAGGTCTaGACAGCCCGCATCGTCCACAGAGGACTCCAGACACCGCCTCCG +
Preference number: 1 (lower is better)
Translates to: GKLAVLENKRLLSKV*TARIVHRGLQTPPP
Trigger: CGGAGGCGGTGTCTGGAGTCCTCTGTGGACGATGCGGGCTGTCCAGACCTTGGAAAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp TCCAGCTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTaGGTCTTCAAGGCCTCCTCACACTTGGCTTCACTCTGCTCCAGC +
Preference number: 1 (lower is better)
Translates to: SSSLCMLSRSAVSTF*VFKASSHLASLCSS
Trigger: GCTGGAGCAGAGTGAAGCCAAGTGTGAGGAGGCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAGCTGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp GCCTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTaGTCGGAGAGCTCAGTTTTCTCCCCATGCTCGGTCTGGATTCTA +
Preference number: 1 (lower is better)
Translates to: ASEDAVWATTACPWV*SESSVFSPCSVWIL
Trigger: TAGAATCCAGACCGAGCATGGGGAGAAAACTGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 90 bp GCTCCTCCACGGCCTTCCTTTCATCTATTCCCTCGGAGGTCGACATaGGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGC +
Preference number: 1 (lower is better)
Translates to: APPRPSFHLFPRRST*ASSGVERPAPGIAG
Trigger: GCCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTCCGAGGGAATAGATGAAAGGAAGGCCGTGGAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 90 bp GCTCTGCCCGCTCACTCTCCAGCACCTGGCAGGCCACATCACCTTTaGAGCGCTCATCGGCAAGGTCAGAGGTCAAGTCAGCAATCTTGC +
Preference number: 1 (lower is better)
Translates to: ALPAHSPAPGRPHHL*SAHRQGQRSSQQSC
Trigger: GCAAGATTGCTGACTTGACCTCTGACCTTGCCGATGAGCGCTTCAAAGGTGATGTGGCCTGCCAGGTGCTGGAGAGTGAGCGGGCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp AGGCTGGAGGGAACCAAGCAGCTGCCACCATGGCCAGTCCTTGACTaGGAGGAACACAGCCACATTCTTCTGGATGCACTGTGCAGCCAG +
Preference number: 1 (lower is better)
Translates to: RLEGTKQLPPWPVLD*EEHSHILLDALCSQ
Trigger: CTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGTGGCAGCTGCTTGGTTCCCTCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp TCCTGGTCCTCATCGATGCGCTTCAGGAGGTCCGCCTTCTCAAACTaGAGCCTGTACAGCTGCTCATCCACCAGGCTCTTGTTCCGCGTC +
Preference number: 1 (lower is better)
Translates to: SWSSSMRFRRSAFSN*SLYSCSSTRLLFRV
Trigger: GACGCGGAACAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATCGATGAGGACCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp CCTTTCATCTATTCCCTCGGAGGTCGACATGAGCTTCTTCAGGAGTaGAGCGTCCAGCACCTGGAATTGCCGGCGGAAGCGAGTGAGCCC +
Preference number: 1 (lower is better)
Translates to: PFIYSLGGRHELLQE*SVQHLELPAEASEP
Trigger: GGGCTCACTCGCTTCCGCCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTCCGAGGGAATAGATGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp GCCTGCAGGTCGGCAATCCGCCGAATGGATGTCTCCAGGTCTGTCTaGAGGGTTTGCCTCACTGCTGCAAGTTCCTCCACGTACTTCTCC +
Preference number: 1 (lower is better)
Translates to: ACRSAIRRMDVSRSV*RVCLTAASSSTYFS
Trigger: GGAGAAGTACGTGGAGGAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGACCTGGAGACATCCATTCGGCGGATTGCCGACCTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 90 bp GTAGAGGCTGGAGGGAACCAAGCAGCTGCCACCATGGCCAGTCCTTaGCTGCGAGGAACACAGCCACATTCTTCTGGATGCACTGTGCAG +
Preference number: 1 (lower is better)
Translates to: VEAGGNQAAATMASP*LRGTQPHSSGCTVQ
Trigger: CTGCACAGTGCATCCAGAAGAATGTGGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGTGGCAGCTGCTTGGTTCCCTCCAGCCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 90 bp TCAGCTCCGAGTCCAGCCTCTCCTCGCATTGCTGCAGACGCTTTCTaGGGAACTCGTTCTCCATCTGAGCACAGTCGAAGCGCATCTGCC +
Preference number: 1 (lower is better)
Translates to: SAPSPASPRIAADAF*GTRSPSEHSRSASA
Trigger: GGCAGATGCGCTTCGACTGTGCTCAGATGGAGAACGAGTTCCTCAGAAAGCGTCTGCAGCAATGCGAGGAGAGGCTGGACTCGGAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 90 bp GTACTTTTGCCGGCGGACAAAGTGGGGAGAAACAGGCTTGTCTCCTaGGGTCTTGCTGTGGACATTGGTGGACCGGGCTCTGCTCAGTGC +
Preference number: 1 (lower is better)
Translates to: VLLPADKVGRNRLVS*GLAVDIGGPGSAQC
Trigger: GCACTGAGCAGAGCCCGGTCCACCAATGTCCACAGCAAGACCTCAGGAGACAAGCCTGTTTCTCCCCACTTTGTCCGCCGGCAAAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 90 bp TTGAAGGACACGATGGAGCCGGAGGATGAGGACGAGTCAGACAGGTaGGCGGGATCCTCCTTGGGCTCCGGGCTCTTCTTCAAAATGGTC +
Preference number: 1 (lower is better)
Translates to: LKDTMEPEDEDESDR*AGSSLGSGLFFKMV
Trigger: GACCATTTTGAAGAAGAGCCCGGAGCCCAAGGAGGATCCCGCTCACCTGTCTGACTCGTCCTCATCCTCCGGCTCCATCGTGTCCTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 90 bp TTTGATGCTGTCAGCACTTTTGAAGGACACGATGGAGCCGGAGGATaGGGACGAGTCAGACAGGTGAGCGGGATCCTCCTTGGGCTCCGG +
Preference number: 1 (lower is better)
Translates to: FDAVSTFEGHDGAGG*GRVRQVSGILLGLR
Trigger: CCGGAGCCCAAGGAGGATCCCGCTCACCTGTCTGACTCGTCCTCATCCTCCGGCTCCATCGTGTCCTTCAAAAGTGCTGACAGCATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp CGGCTTGGCCCAAACGTCATTTGCTGGATGATCTGTCGAAGGTGGTaGTTGAAGGTGGCCGTGTTCAGCTCCTCATACTCGCAGCCCAGG +
Preference number: 1 (lower is better)
Translates to: RLGPNVICWMICRRW*LKVAVFSSSYSQPR
Trigger: CCTGGGCTGCGAGTATGAGGAGCTGAACACGGCCACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp TCATCCACCAGGCTCTTGTTCCGCGTCATGTTCTCCAGCTCGCTGTaGATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAG +
Preference number: 1 (lower is better)
Translates to: SSTRLLFRVMFSSSL*MLSRSAVSTFCVFK
Trigger: CTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAGCTGGAGAACATGACGCGGAACAAGAGCCTGGTGGATGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp TCCTCATCCTCGAGGCCCCATCGGCTTGGCCCAAACGTCATTTGCTaGATGATCTGTCGAAGGTGGTGCTTGAAGGTGGCCGTGTTCAGC +
Preference number: 1 (lower is better)
Translates to: SSSSRPHRLGPNVIC*MICRRWCLKVAVFS
Trigger: GCTGAACACGGCCACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTCGAGGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp ATGCCACTTCTTCCAAGGCAGCCTGCAGGTCGGCAATCCGCCGAATaGATGTCTCCAGGTCTGTCTGGAGGGTTTGCCTCACTGCTGCAA +
Preference number: 1 (lower is better)
Translates to: MPLLPRQPAGRQSAE*MSPGLSGGFASLLQ
Trigger: TTGCAGCAGTGAGGCAAACCCTCCAGACAGACCTGGAGACATCCATTCGGCGGATTGCCGACCTGCAGGCTGCCTTGGAAGAAGTGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp TCACTGCCTAGAGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTaGAAAACAAGCGGCTCCTTTCCAAGGTCTGGACAGCCCGCATCG +
Preference number: 1 (lower is better)
Translates to: SLPRGSSIRWANWRF*KTSGSFPRSGQPAS
Trigger: CGATGCGGGCTGTCCAGACCTTGGAAAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCTCTAGGCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp CCGTCTTGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTaGGGCTTCCGGATAGCTGGGAGGAAGTCATCGAAGTCCACTTTG +
Preference number: 1 (lower is better)
Translates to: PSCPPLADPAKEVGV*GFRIAGRKSSKSTL
Trigger: CAAAGTGGACTTCGATGACTTCCTCCCAGCTATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp GTTTCCTCATCCTCGAGGCCCCATCGGCTTGGCCCAAACGTCATTTaGTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTGGCCGTGTTC +
Preference number: 1 (lower is better)
Translates to: VSSSSRPHRLGPNVI*WMICRRWCLKVAVF
Trigger: GAACACGGCCACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTCGAGGATGAGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp CTCTCAGTATCACTGTCACTGGATGCCACTTCTTCCAAGGCAGCCTaGAGGTCGGCAATCCGCCGAATGGATGTCTCCAGGTCTGTCTGG +
Preference number: 1 (lower is better)
Translates to: LSVSLSLDATSSKAA*RSAIRRMDVSRSVW
Trigger: CCAGACAGACCTGGAGACATCCATTCGGCGGATTGCCGACCTGCAGGCTGCCTTGGAAGAAGTGGCATCCAGTGACAGTGATACTGAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTaGCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGC +
Preference number: 1 (lower is better)
Translates to: ASSVSKWMLERCEPS*PPLADPAKEVGVWG
Trigger: GCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp GAAAAGGATCTGTTGATGAGTGAGACCACAGCCGCAAAGAGTTCCTaGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTC +
Preference number: 1 (lower is better)
Translates to: EKDLLMSETTAAKSS*YRPEAIPSTQSTPV
Trigger: GACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTCTTTGCGGCTGTGGTCTCACTCATCAACAGATCCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp CTCCTGCTTTCCACCACAGGGTTTGGTACCAGGCAGTGGATAAAGTaGAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGC +
Preference number: 1 (lower is better)
Translates to: LLLSTTGFGTRQWIK*SRDLLIMLVSASIC
Trigger: GCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCAAACCCTGTGGTGGAAAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp TTCTGGAACTCTGTCTTGTTCTCTAGGTCACAGATGACCGCCTCCTaGCTGCTGACGATGGCTCGATCCACGGTGGACTGTTCCAGGTAC +
Preference number: 1 (lower is better)
Translates to: FWNSVLFSRSQMTAS*LLTMARSTVDCSRY
Trigger: GTACCTGGAACAGTCCACCGTGGATCGAGCCATCGTCAGCAGGCAGGAGGCGGTCATCTGTGACCTAGAGAACAAGACAGAGTTCCAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp ACAATCCACTGCCGTCTGGACACTCTCAGTATCACTGTCACTGGATaGCACTTCTTCCAAGGCAGCCTGCAGGTCGGCAATCCGCCGAAT +
Preference number: 1 (lower is better)
Translates to: TIHCRLDTLSITVTG*HFFQGSLQVGNPPN
Trigger: ATTCGGCGGATTGCCGACCTGCAGGCTGCCTTGGAAGAAGTGGCATCCAGTGACAGTGATACTGAGAGTGTCCAGACGGCAGTGGATTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp TTTGCTTCAGCTGCTGCTGAAGCTGGCCTAGCTCCCACCGGACACTaGTGTTCTCCTGGGTCACTTTCTCACGGAGACCCTTCTCAAACA +
Preference number: 1 (lower is better)
Translates to: FASAAAEAGLAPTGH*CSPGSLSHGDPSQT
Trigger: TGTTTGAGAAGGGTCTCCGTGAGAAAGTGACCCAGGAGAACACCAGTGTCCGGTGGGAGCTAGGCCAGCTTCAGCAGCAGCTGAAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp TGGCGGAGCTGCTCCAGCTGCTTGATGGTGTTTTCCTGCTGGCTCTaGATTTTCTGTTGCTCAAGGGCGCTGGATTCCAACTTCCAGAGC +
Preference number: 1 (lower is better)
Translates to: WRSCSSCLMVFSCWL*IFCCSRALDSNFQS
Trigger: GCTCTGGAAGTTGGAATCCAGCGCCCTTGAGCAACAGAAAATCCAGAGCCAGCAGGAAAACACCATCAAGCAGCTGGAGCAGCTCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp CTGAATGGGTCACTGCCTAGAGGTTCCTCCATCAGGTGGGCAAACTaGCGGTTCTGGAAAACAAGCGGCTCCTTTCCAAGGTCTGGACAG +
Preference number: 1 (lower is better)
Translates to: LNGSLPRGSSIRWAN*RFWKTSGSFPRSGQ
Trigger: CTGTCCAGACCTTGGAAAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCTCTAGGCAGTGACCCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 90 bp CCACTTTGGTCTTGCGTTCGTAGTCGAGGCTTGGGAGTTTCCAGCTaGATGGGTCACTGCCTAGAGGTTCCTCCATCAGGTGGGCAAACT +
Preference number: 1 (lower is better)
Translates to: PLWSCVRSRGLGVSS*MGHCLEVPPSGGQT
Trigger: AGTTTGCCCACCTGATGGAGGAACCTCTAGGCAGTGACCCATTCAGCTGGAAACTCCCAAGCCTCGACTACGAACGCAAGACCAAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp TGTGCTTCTGCATCAGCTCATTCAGGTCATCCTGGTCCTCATCGATaGGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCT +
Preference number: 1 (lower is better)
Translates to: CASASAHSGHPGPHR*ASGGPPSQTAACTA
Trigger: AGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATCGATGAGGACCAGGATGACCTGAATGAGCTGATGCAGAAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp AGATGCCCAGGAGTCAACACTTTATTTTGTTCAGGCCAACCACACTaGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCT +
Preference number: 1 (lower is better)
Translates to: RCPGVNTLFCSGQPH*EPSIPAGYASVGSS
Trigger: AGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAAATAAAGTGTTGACTCCTGGGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
3UTR CCA 90 bp TGGTGGTGGAGATTCCTGCCCACTCCTGCTTTCCACCACAGGGTTTaGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCAT +
Preference number: 1 (lower is better)
Translates to: WWWRFLPTPAFHHRV*YQAVDKVQPGPFDH
Trigger: ATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCAAACCCTGTGGTGGAAAGCAGGAGTGGGCAGGAATCTCCACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp AGTTTCCAGCTGAATGGGTCACTGCCTAGAGGTTCCTCCATCAGGTaGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTTCCAAGG +
Preference number: 1 (lower is better)
Translates to: SFQLNGSLPRGSSIR*ANWRFWKTSGSFPR
Trigger: CCTTGGAAAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCTCTAGGCAGTGACCCATTCAGCTGGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp CACCATGGCCAGTCCTTGACTGCGAGGAACACAGCCACATTCTTCTaGATGCACTGTGCAGCCAGTCGGCGAATCTTCAGCTTCTTGAAT +
Preference number: 1 (lower is better)
Translates to: HHGQSLTARNTATFF*MHCAASRRIFSFLN
Trigger: ATTCAAGAAGCTGAAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp TCCAGCTGCTTGATGGTGTTTTCCTGCTGGCTCTGGATTTTCTGTTaGTCAAGGGCGCTGGATTCCAACTTCCAGAGCCTCTCCTTCAAG +
Preference number: 1 (lower is better)
Translates to: SSCLMVFSCWLWIFC*SRALDSNFQSLSFK
Trigger: CTTGAAGGAGAGGCTCTGGAAGTTGGAATCCAGCGCCCTTGAGCAACAGAAAATCCAGAGCCAGCAGGAAAACACCATCAAGCAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp AAGGAGGCTGAACTGGTTCCTACTTCTGGAGGTATTTCTTCATTATaGTCGCAACATCGTCGTCTTTCCTCCCCGTCCCTGGCTCTCTCC +
Preference number: 1 (lower is better)
Translates to: KEAELVPTSGGISSL*SQHRRLSSPSLALS
Trigger: GGAGAGAGCCAGGGACGGGGAGGAAAGACGACGATGTTGCGAGCATAATGAAGAAATACCTCCAGAAGTAGGAACCAGTTCAGCCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp TGGTGTTTTCCTGCTGGCTCTGGATTTTCTGTTGCTCAAGGGCGCTaGATTCCAACTTCCAGAGCCTCTCCTTCAAGCCAGCAACGCAAT +
Preference number: 1 (lower is better)
Translates to: WCFPAGSGFSVAQGR*IPTSRASPSSQQRN
Trigger: ATTGCGTTGCTGGCTTGAAGGAGAGGCTCTGGAAGTTGGAATCCAGCGCCCTTGAGCAACAGAAAATCCAGAGCCAGCAGGAAAACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp CGAAGCCGGATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTaGAACTCTGTCTTGTTCTCTAGGTCACAGATGACCGCCTCCTGC +
Preference number: 1 (lower is better)
Translates to: RSRITRTSNLLICTF*NSVLFSRSQMTASC
Trigger: GCAGGAGGCGGTCATCTGTGACCTAGAGAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGATCCGGCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 90 bp TTGATCCCCGAGAGAAAGGAACGGTTAGCCTCTTCCGTTTCAAAGTaGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTTTGGCTGAT +
Preference number: 1 (lower is better)
Translates to: LIPERKERLASSVSK*MLERCEPSCPPLAD
Trigger: ATCAGCCAAAGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGCTAACCGTTCCTTTCTCTCGGGGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp TGGCCAATCTGGTCACAGAGGGTTCCGATCAAGCCTTCCAAATCTTaGTTCTCATGGAGGACCATCTGCTTCTCTTCATACTCTTGCTCC +
Preference number: 1 (lower is better)
Translates to: WPIWSQRVPIKPSKS*FSWRTICFSSYSCS
Trigger: GGAGCAAGAGTATGAAGAGAAGCAGATGGTCCTCCATGAGAAGCAAGATTTGGAAGGCTTGATCGGAACCCTCTGTGACCAGATTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp CAAGTGGACTCCACTATTCTGAAGGTCTCTTCCAACTTGGCCCTTTaGATGTCTGTGATCCCACCACGGATCTTCTGTCATTATGTGGAC +
Preference number: 1 (lower is better)
Translates to: QVDSTILKVSSNLAL*MSVIPPRIFCHYVD
Trigger: GTCCACATAATGACAGAAGATCCGTGGTGGGATCACAGACATGCAAAGGGCCAAGTTGGAAGAGACCTTCAGAATAGTGGAGTCCACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
3UTR TCA 90 bp CACTCGTCTGCTCCTCCAGTGGGATTCCTTTCCAAGTCATTCAACTaGATTTTCTGCTGGGCTTCTTCCAACTGTTTATTCACATCTCCC +
Preference number: 1 (lower is better)
Translates to: HSSAPPVGFLSKSFN*IFCWASSNCLFTSP
Trigger: GGGAGATGTGAATAAACAGTTGGAAGAAGCCCAGCAGAAAATTCAGTTGAATGACTTGGAAAGGAATCCCACTGGAGGAGCAGACGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 90 bp TCAGAGGTCAAGTCAGCAATCTTGCTTTCTAGCAGATCTGTGTTCTaGCGGAGTTCATTCCGCAACTTCTCTGATTTTTCTAGCTTCCGT +
Preference number: 1 (lower is better)
Translates to: SEVKSAILLSSRSVF*RSSFRNFSDFSSFR
Trigger: ACGGAAGCTAGAAAAATCAGAGAAGTTGCGGAATGAACTCCGGCAGAACACAGATCTGCTAGAAAGCAAGATTGCTGACTTGACCTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp CCCTGGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGCCTCTAGGCCCAGCGTaGACCCCTGGCCTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PWLSPLGGRSLATVTRKSPLGPA*TPGLSG
Trigger: CCCAGAGAGGCCAGGGGTCCACGCTGGGCCTAGAGG...CGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp CCCTGGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGGCCGGCGGAAGCGAGTaGGCCCCATGTGGTCAGCAT +
Preference number: 2 (lower is better)
Translates to: PWLSPLGGRSLATVTRKSAGGSE*APCGQH
Trigger: ATGCTGACCACATGGGGCTCACTCGCTTCCGCCGGC...CGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp CCCTGGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGCAGCTCAACCAGGACTaGAGGCTGCCCTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PWLSPLGGRSLATVTRKSQLNQD*RLPSGW
Trigger: CCAGCCAGAGGGCAGCCTGCAGTCCTGGTTGAGCTG...CGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp CCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTaGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: PSIPAGYASVGSSRL*RVAMLAGSGHRGGL
Trigger: CAGGCCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR-3UTR CCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACATGCTGGCTGGCTCTaGCCACCGGGGAGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSHAGWL*PPGRPG
Trigger: GCCAGGCCTCCCCGGTGGCCAGAGCCAGCCAGCATG...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR-3UTR CCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGGTGGCCATGCTGGCTaGCTCTGGCCACCGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSGGHAG*LWPPGR
Trigger: CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACC...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR-3UTR TCA 90 bp CCCTGGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGCATCCATCTGCAGCTTaGTCTGGGAGCACGGGGCTT +
Preference number: 2 (lower is better)
Translates to: PWLSPLGGRSLATVTRKSHPSAA*SGSTGL
Trigger: AAGCCCCGTGCTCCCAGATCAAGCTGCAGATGGATG...CGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGTGGCCATGCTGGCTaGCTCTGGCCACCGGGGAGG +
Preference number: 2 (lower is better)
Translates to: PRRICLCGLISPLEGGHAGGHAG*LWPPGR
Trigger: CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACC...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR-3UTR TCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGTGTGGAGCCAGCCCGTaGGGTCGTACCGCACAGGGT +
Preference number: 2 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGECGASP*GRTAQG
Trigger: ACCCTGTGCGGTACGACCTCACGGGCTGGCTCCACA...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCGCCACCGGGGAGGCCTaGCCAGTCTCTCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLATGEA*PVSLSP
Trigger: TGGAGACAGAGAGACTGGCCAGGCCTCCCCGGTGGC...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR-3UTR CCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGCCACCGGGGAGGCCTaGCCAGTCTCTCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSATGEA*PVSLSP
Trigger: TGGAGACAGAGAGACTGGCCAGGCCTCCCCGGTGGC...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR-3UTR GCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCATCACACTGGAGGGGCTaGTCACAGGTCCGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: VDRALLSANADWVLSVSPSHWRG*SQVRRA
Trigger: TGCCCTGCGGACCTGTGAGCAGCCCCTCCAGTGTGA...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp CCCTGGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGTGGCCAGTCCTTGACTaGGAGGAACACAGCCACATT +
Preference number: 2 (lower is better)
Translates to: PWLSPLGGRSLATVTRKSWPVLD*EEHSHI
Trigger: AATGTGGCTGTGTTCCTCGCAGTCAAGGACTGGCCA...CGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp CTTTTTGACTGGTGCAGGACCTGGGGTGCATCCAGGGCCGAGAGGTaGGGCTTGGCTCTGTGGAGCCAGCCCGTGAGGTCGTACCGCACA +
Preference number: 2 (lower is better)
Translates to: LFDWCRTWGASRAER*GLALWSQPVRSYRT
Trigger: TGTGCGGTACGACCTCACGGGCTGGCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGGATGCACCCCAGGTCCTGCACCAGTCAAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp CTCAGTGCTGGGATATCCAGGGCCAGAGGTCCACCTGCCCCAGGCTaGTCTCTACCAGGCTGCGGTGGTGGTGGAGATTCCTGCCCACTC +
Preference number: 2 (lower is better)
Translates to: LSAGISRARGPPAPG*SLPGCGGGGDSCPL
Trigger: GAGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGTAGAGACAAGCCTGGGGCAGGTGGACCTCTGGCCCTGGATATCCCAGCACTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCATGCTTCAGCTGCTGCTaGAGCTGGCCTAGCTCCCAC +
Preference number: 2 (lower is better)
Translates to: VDRALLSANADWVLSVSPCFSCC*SWPSSH
Trigger: GTGGGAGCTAGGCCAGCTTCAGCAGCAGCTGAAGCA...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCACCGGGCTCTGCTCAGTaGCAATGCCGACTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: EDAVWATTACPWVWSESSPGSAQ*QCRLGP
Trigger: AGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGG...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATGCCACCGGGGAGGCCTaGCCAGTCTCTCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHATGEA*PVSLSP
Trigger: TGGAGACAGAGAGACTGGCCAGGCCTCCCCGGTGGC...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCCACCGGGGAGGCCTaGCCAGTCTCTCTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: HPRRICLCGLISPLEGGHATGEA*PVSLSP
Trigger: TGGAGACAGAGAGACTGGCCAGGCCTCCCCGGTGGC...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR-3UTR CCA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCAGGTGGCCATGCTGGCTaGCTCTGGCCACCGGGGAGG +
Preference number: 2 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPGGHAG*LWPPGR
Trigger: CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACC...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATAGCCCGGTCCTTGCCCTaGTGCCGGGGGTTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: CPPLADPAKEVGVWGFRIARSLP*CRGFWK
Trigger: CTTCCAGAACCCCCGGCACCAGGGCAAGGACCGGGC...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCGCTCATCTCGCCTCTTaGGGGTGGCCATGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGAHLAS*GWPCWL
Trigger: CAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGC...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGCCCAGGGCCTCAGCTaGGTAGTTTGCCCACTCAAA +
Preference number: 2 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWAQGLS*VVCPLK
Trigger: TTTGAGTGGGCAAACTACGCAGCTGAGGCCCTGGGC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCGTGCAGGACCTGGGGTaGATCCAGGGCCGAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGVQDLG*IQGREV
Trigger: AACCTCTCGGCCCTGGATGCACCCCAGGTCCTGCAC...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCACTCCTCTGCAGGGCCTaGTGGGAGGTGCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPLLCRA*WEVPSR
Trigger: CCTGGAGGGCACCTCCCAGCAGGCCCTGCAGAGGAG...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCAGTCGAAGCGCATCTaGCACTCGTCTGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGEQSKRI*HSSAPP
Trigger: TGGAGGAGCAGACGAGTGGCAGATGCGCTTCGACTG...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGTTCTCCAGCTCGCTGTaGATGCTCTCCAGGTCCGCT +
Preference number: 2 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGEFSSSL*MLSRSA
Trigger: AGCGGACCTGGAGAGCATGCACAGCGAGCTGGAGAA...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAGAGGCCCCATCGGCTTaGCCCAAACGTCATTTGCTG +
Preference number: 2 (lower is better)
Translates to: VDRALLSANADWVLSVSPEAPSA*PKRHLL
Trigger: CAGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTC...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGCCAGGGCCGAGAGGTTaGGCTTGGCTCTGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRPGPRG*AWLCGA
Trigger: GGCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGG...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCAACACAGGAGGCAGCTTaGCCCGGGCCTGGAATAGAC +
Preference number: 2 (lower is better)
Translates to: EDAVWATTACPWVWSESSTQEAA*PGPGID
Trigger: GTCTATTCCAGGCCCGGGCCAAGCTGCCTCCTGTGT...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAGCTCCAGCTCTTTCCTaGCTGTCAGCTCCGAGTCCA +
Preference number: 2 (lower is better)
Translates to: VDRALLSANADWVLSVSPAPALS*LSAPSP
Trigger: TGGACTCGGAGCTGACAGCCAGGAAAGAGCTGGAGC...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCATGCCCCTCCTTAGTGTaGAGGCCCCAGTCGTCTGGT +
Preference number: 2 (lower is better)
Translates to: EDAVWATTACPWVWSESSCPSLV*RPQSSG
Trigger: ACCAGACGACTGGGGCCTCCACACTAAGGAGGGGCA...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp TGCTGGGACTCGGAGGTGGCCGCCTGTGAAAGCTCCTCCCCCATCTaGATCAGGCTGTCCCGAAGCCGGATCACCAGGACCTCAAATCTC +
Preference number: 2 (lower is better)
Translates to: CWDSEVAACESSSPI*IRLSRSRITRTSNL
Trigger: GAGATTTGAGGTCCTGGTGATCCGGCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGCTTTCACAGGCGGCCACCTCCGAGTCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCACCACTCCTGTCATCTTaGGCCCTGAGCTGGTTTCCT +
Preference number: 2 (lower is better)
Translates to: VDRALLSANADWVLSVSPPLLSS*ALSWFP
Trigger: AGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGG...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATACTCCGAGAGGGCCGCTaGAGGACTGGGCAGCTTTTC +
Preference number: 2 (lower is better)
Translates to: CPPLADPAKEVGVWGFRILREGR*RTGQLF
Trigger: GAAAAGCTGCCCAGTCCTTCAGCGGCCCTCTCGGAG...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGGGGGTTCTGGAAGCCTaGAGAGTCCACCACCATGAT +
Preference number: 2 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGEGVLEA*RVHHHD
Trigger: ATCATGGTGGTGGACTCTCCAGGCTTCCAGAACCCC...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATAAGGCCTCTGGCATCCTaGGCACCTCCTCCAGCTGGT +
Preference number: 2 (lower is better)
Translates to: CPPLADPAKEVGVWGFRIRPLAS*APPPAG
Trigger: ACCAGCTGGAGGAGGTGCCCAGGATGCCAGAGGCCT...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCACGGCAATCCGCCGAATaGATGTCTCCAGGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: VDRALLSANADWVLSVSPRQSAE*MSPGLS
Trigger: AGACAGACCTGGAGACATCCATTCGGCGGATTGCCG...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCCCCTTTGCATGTCTGTaGTCCCACCACGGATCTTCT +
Preference number: 2 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLPFACL*SHHGSS
Trigger: AGAAGATCCGTGGTGGGATCACAGACATGCAAAGGG...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540454.1
3UTR-3UTR TCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCGTCGAAGGTGGTGCTTaGAGGTGGCCGTGTTCAGCT +
Preference number: 2 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLVEGGA*RWPCSA
Trigger: AGCTGAACACGGCCACCTTCAAGCACCACCTTCGAC...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCGGAACACCTTCCTCTTaGTATCGCTGTAGCGTGGAG +
Preference number: 2 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFGTPSS*YRCSVE
Trigger: CTCCACGCTACAGCGATATCAAGAGGAAGGTGTTCC...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGAGTCCACTTTGGTCTTaGGTTCGTAGTCGAGGCTTG +
Preference number: 2 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPSPLWS*VRSRGL
Trigger: CAAGCCTCGACTACGAACGCAAGACCAAAGTGGACT...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAATGATCTGTCGAAGGTaGTGCTTGAAGGTGGCCGTG +
Preference number: 2 (lower is better)
Translates to: VDRALLSANADWVLSVSPMICRR*CLKVAV
Trigger: CACGGCCACCTTCAAGCACCACCTTCGACAGATCAT...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGTGGTGCCGGGGGTTCTaGAAGCCTGGAGAGTCCACC +
Preference number: 2 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVWCRGF*KPGEST
Trigger: GGTGGACTCTCCAGGCTTCCAGAACCCCCGGCACCA...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATCCGAGAGGTTGGGCTTaGCTCTGTGGAGCCAGCCCG +
Preference number: 2 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDPRGWA*LCGASP
Trigger: CGGGCTGGCTCCACAGAGCCAAGCCCAACCTCTCGG...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTGACTGGTGCAGGACCTaGGGTGCATCCAGGGCCGAG +
Preference number: 2 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLDWCRT*GASRAE
Trigger: CTCGGCCCTGGATGCACCCCAGGTCCTGCACCAGTC...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGGGAGCGTCCAGCACCTaGAATTGCCGGCGGAAGCGA +
Preference number: 2 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVGASST*NCRRKR
Trigger: TCGCTTCCGCCGGCAATTCCAGGTGCTGGACGCTCC...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGTCCAGCTCAAACCGCTaGCGGAGCTGCTCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVSSSNR*RSCSSC
Trigger: GCAGCTGGAGCAGCTCCGCCAGCGGTTTGAGCTGGA...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCATCACTCTGCTCCAGCTaGCTGTGCACTTTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: EDAVWATTACPWVWSESSSLCSS*LCTFSS
Trigger: GCTGGAGAAAGTGCACAGCCAGCTGGAGCAGAGTGA...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp CGCTCTGCCCGCTCACTCTCCAGCACCTGGCAGGCCACATCACCTTaGAAGCGCTCATCGGCAAGGTCAGAGGTCAAGTCAGCAATCTTG +
Preference number: 2 (lower is better)
Translates to: RSARSLSSTWQATSP*KRSSARSEVKSAIL
Trigger: CAAGATTGCTGACTTGACCTCTGACCTTGCCGATGAGCGCTTCAAAGGTGATGTGGCCTGCCAGGTGCTGGAGAGTGAGCGGGCAGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATAGCAGCCGGGACCTTTTaGTCATGCTGGTCAGCGCAT +
Preference number: 2 (lower is better)
Translates to: CPPLADPAKEVGVWGFRIAAGTF*SCWSAH
Trigger: ATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGC...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATCCGCCTCCTGCCTGCTaGCGATGGCTCGATCCACGG +
Preference number: 2 (lower is better)
Translates to: SGDVFVLREARGEEAGSNPPPAC*RWLDPR
Trigger: CCGTGGATCGAGCCATCGTCAGCAGGCAGGAGGCGG...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTGGCCAGAGGTCCACCTaGCCCAGGCTTGTCTCTACC +
Preference number: 2 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLGQRST*PRLVST
Trigger: GGTAGAGACAAGCCTGGGGCAGGTGGACCTCTGGCC...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATAAGGGCCTGGGCCAGCTaGAGGTCAAACTTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: CPPLADPAKEVGVWGFRIRAWAS*RSNFFC
Trigger: GCAGAAGAAGTTTGACCTGCAGCTGGCCCAGGCCCT...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCAACCGCTGGCGGAGCTaGTCCAGCTGCTTGATGGTG +
Preference number: 2 (lower is better)
Translates to: DALQEVRLLKLQPVQLLINRWRS*SSCLMV
Trigger: CACCATCAAGCAGCTGGAGCAGCTCCGCCAGCGGTT...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTCTTCTGTCATTATGTaGACAGAACGCCATCACAGC +
Preference number: 2 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRSSVIM*TERHHS
Trigger: GCTGTGATGGCGTTCTGTCCACATAATGACAGAAGA...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540454.1
3UTR-3UTR CCA 90 bp CTCCTTTCTTCTCGAAAGCAGCACACAGACGCTCGAGCACCACACTGTCACTGGACAGCTCCTCAAAGGTaGCCGCCCGGTCCTTGCCCT +
Preference number: 2 (lower is better)
Translates to: LLSSRKQHTDARAPHCHWTAPQR*PPGPCP
Trigger: AGGGCAAGGACCGGGCGGCCACCTTTGAGGAGCTGT...CCAGTGACAGTGTGGTGCTCGAGCGTCTGTGTGCTGCTTTCGAGAAGAAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCATCCTCTCTTTTTGACTaGTGCAGGACCTGGGGTGCA +
Preference number: 2 (lower is better)
Translates to: EDAVWATTACPWVWSESSSSLFD*CRTWGA
Trigger: TGCACCCCAGGTCCTGCACCAGTCAAAAAGAGAGGA...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGAGAGCCTCCAGGATGTaGAACCCAGCAAGCTGGACC +
Preference number: 2 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRRASRM*NPASWT
Trigger: GGTCCAGCTTGCTGGGTTCCACATCCTGGAGGCTCT...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGAGGTCACAGGTAAGATaGTGGCACTTCCTCTTCAGT +
Preference number: 2 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPRSQVR*WHFLFS
Trigger: ACTGAAGAGGAAGTGCCACCATCTTACCTGTGACCT...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGACACTGGTGTTCTCCTaGGTCACTTTCTCACGGAGA +
Preference number: 2 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGETLVFS*VTFSRR
Trigger: TCTCCGTGAGAAAGTGACCCAGGAGAACACCAGTGT...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATACTCCTTTCCAAGGTCTaGACAGCCCGCATCGTCCAC +
Preference number: 2 (lower is better)
Translates to: CPPLADPAKEVGVWGFRILLSKV*TARIVH
Trigger: GTGGACGATGCGGGCTGTCCAGACCTTGGAAAGGAG...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp CTTGGCCCAAACGTCATTTGCTGGATGATCTGTCGAAGGTGGTGCTaGAAGGTGGCCGTGTTCAGCTCCTCATACTCGCAGCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: LGPNVICWMICRRWC*KVAVFSSSYSQPRA
Trigger: GGCCCTGGGCTGCGAGTATGAGGAGCTGAACACGGCCACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp GCTTCACTCTGCTCCAGCTGGCTGTGCACTTTCTCCAGCTCCTCCTaGCTGACTGATGTCTTGCCATCCTCCATGGTGCCCAGAAGGAGC +
Preference number: 2 (lower is better)
Translates to: ASLCSSWLCTFSSSS*LTDVLPSSMVPRRS
Trigger: GCTCCTTCTGGGCACCATGGAGGATGGCAAGACATCAGTCAGCAAGGAGGAGCTGGAGAAAGTGCACAGCCAGCTGGAGCAGAGTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp CGCTCGCCACCGTCACCCGCAAGTCGTGGGATTCCTGGTCGACTTTaGATGCTGTCAGCACTTTTGAAGGACACGATGGAGCCGGAGGAT +
Preference number: 2 (lower is better)
Translates to: RSPPSPASRGIPGRL*MLSALLKDTMEPED
Trigger: ATCCTCCGGCTCCATCGTGTCCTTCAAAAGTGCTGACAGCATCAAAAGTCGACCAGGAATCCCACGACTTGCGGGTGACGGTGGCGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGCCTCGGAGGTCGACATaGGCTTCTTCAGGAGTGGAG +
Preference number: 2 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVPRRST*ASSGVE
Trigger: CTCCACTCCTGAAGAAGCTCATGTCGACCTCCGAGG...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATAGCCCCCAACACCGTCTaGAGAGATGCATTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: CPPLADPAKEVGVWGFRIAPNTV*RDAFEA
Trigger: AGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGC...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATTCACCGCGGCAAGGCTaGTGGCAAAGGTCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDSPRQG*WQRSSS
Trigger: TGAGGAGGACCTTTGCCAGCAGCCTTGCCGCGGTGA...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATATCCTTGGCTCGGAGCTaGTCAGTTCCAATGGTGGCA +
Preference number: 2 (lower is better)
Translates to: CPPLADPAKEVGVWGFRISLARS*SVPMVA
Trigger: TGCCACCATTGGAACTGAGCAGCTCCGAGCCAAGGA...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCTGCCATCCTCCATGGTaGCCAGAAGGAGCTGCACGT +
Preference number: 2 (lower is better)
Translates to: DALQEVRLLKLQPVQLLICHPPW*PEGAAR
Trigger: ACGTGCAGCTCCTTCTGGGCACCATGGAGGATGGCA...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCGGGTCCCATCCCAACTaGTGGAAAATCTCACACTGG +
Preference number: 2 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGGSHPN*WKISHW
Trigger: CCAGTGTGAGATTTTCCACCAGTTGGGATGGGACCC...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCACCAGGCTCTTGTTCCGCAAGCAGCTGCCACCATaGCCAGTCCTTGACTGCGAG +
Preference number: 2 (lower is better)
Translates to: AFSNCSLYSCSSTRLLFRKQLPP*PVLDCE
Trigger: CTCGCAGTCAAGGACTGGCCATGGTGGCAGCTGCTT...GCGGAACAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTGGGCCGCTGAAGGACTaGGCAGCTTTTCCCTCGACA +
Preference number: 2 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLGPLKD*AAFPST
Trigger: TGTCGAGGGAAAAGCTGCCCAGTCCTTCAGCGGCCC...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp GGTTTCCTCATCCTCGAGGCCCCATCGGCTTGGCCCAAACGTCATTaGCTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTGGCCGTGTT +
Preference number: 2 (lower is better)
Translates to: GFLILEAPSAWPKRH*LDDLSKVVLEGGRV
Trigger: AACACGGCCACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTCGAGGATGAGGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp AGTAGAGGCTGGAGGGAACCAAGCAGCTGCCACCATGGCCAGTCCTaGACTGCGAGGAACACAGCCACATTCTTCTGGATGCACTGTGCA +
Preference number: 2 (lower is better)
Translates to: SRGWREPSSCHHGQS*TARNTATFFWMHCA
Trigger: TGCACAGTGCATCCAGAAGAATGTGGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGTGGCAGCTGCTTGGTTCCCTCCAGCCTCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp GTCGGCAATCCGCCGAATGGATGTCTCCAGGTCTGTCTGGAGGGTTaGCCTCACTGCTGCAAGTTCCTCCACGTACTTCTCCAGCTCCAT +
Preference number: 2 (lower is better)
Translates to: VGNPPNGCLQVCLEG*PHCCKFLHVLLQLH
Trigger: ATGGAGCTGGAGAAGTACGTGGAGGAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGACCTGGAGACATCCATTCGGCGGATTGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGGAGAGTCCACCACCATaGTGGAGGCCATGGAGAGAT +
Preference number: 2 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVESPPP*WRPWRD
Trigger: ATCTCTCCATGGCCTCCATCATGGTGGTGGACTCTC...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTAGGGAACCAAGCAGCTaGCACCATGGCCAGTCCTTG +
Preference number: 2 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLREPSS*HHGQSL
Trigger: CAAGGACTGGCCATGGTGGCAGCTGCTTGGTTCCCT...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGTTGATGGTGTTTTCCTaGTGGCTCTGGATTTTCTGT +
Preference number: 2 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPLMVFS*WLWIFC
Trigger: ACAGAAAATCCAGAGCCAGCAGGAAAACACCATCAA...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp GCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCACCAGGCTCTTGTTCCGCTCACGGTCCTTCTGGTaGATCTGCTTCATCCGCTCG +
Preference number: 2 (lower is better)
Translates to: AFSNCSLYSCSSTRLLFRSRSFW*ICFIRS
Trigger: CGAGCGGATGAAGCAGATGCACCAGAAGGACCGTGA...GCGGAACAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTAGGCTGCGGTGGTGGTaGAGATTCCTGCCCACTCCT +
Preference number: 2 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPRLRWW*RFLPTP
Trigger: AGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCT...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGTCCCGATGGCCAATCTaGTCACAGAGGGTTCCGATC +
Preference number: 2 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVSRWPI*SQRVPI
Trigger: GATCGGAACCCTCTGTGACCAGATTGGCCATCGGGA...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTACCATGGCCAGTCCTTaGCTGCGAGGAACACAGCCA +
Preference number: 2 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPTMASP*LRGTQP
Trigger: TGGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGT...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTGTTCATGCTTGCTCTTaGGCTCCTGGACCTCCCGGA +
Preference number: 2 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPVHACS*APGPPG
Trigger: TCCGGGAGGTCCAGGAGCTCAAGAGCAAGCATGAAC...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCAGCTTCTTGAATTCCTaGCGAGACAGAAAGCCCTTG +
Preference number: 2 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGSFLNS*RDRKPL
Trigger: CAAGGGCTTTCTGTCTCGCCAGGAATTCAAGAAGCT...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTGGTTCCTCCATCAGGTaGGCAAACTGGCGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPGSSIR*ANWRFW
Trigger: CCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACC...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp ACAGGGTTTGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTaGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATCTGGGAG +
Preference number: 2 (lower is better)
Translates to: TGFGTRQWIKCSRDL*IMLVSASICSLIWE
Trigger: CTCCCAGATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCAAACCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp GTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTTaGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATA +
Preference number: 2 (lower is better)
Translates to: VSKWMLERCEPSCPP*ADPAKEVGVWGFRI
Trigger: TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTAGCATCTCCACCTGCTaGTTCAGCTGTGAGGCTTCC +
Preference number: 2 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPSISTC*FSCEAS
Trigger: GGAAGCCTCACAGCTGAAGCAGCAGGTGGAGATGCT...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCCCACAACAGCCACGGTaGTCCCTGGGGAGGGGTCCG +
Preference number: 2 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFPQQPR*SLGRGP
Trigger: CGGACCCCTCCCCAGGGACCACCGTGGCTGTTGTGG...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGTTCCACCACAGGGTTTaGTACCAGGCAGTGGATAAA +
Preference number: 2 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRFHHRV*YQAVDK
Trigger: TTTATCCACTGCCTGGTACCAAACCCTGTGGTGGAA...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp ACAGCCACATTCTTCTGGATGCACTGTGCAGCCAGTCGGCGAATCTTCAGCTTCTGGAACCCAGCAAGCTaGACCCTCAGTGCTGGGATA +
Preference number: 2 (lower is better)
Translates to: TATFFWMHCAASRRIFSFWNPAS*TLSAGI
Trigger: TATCCCAGCACTGAGGGTCCAGCTTGCTGGGTTCCA...GAAGCTGAAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp GCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCACCAGGCTCTTGTTCCGCACATCAAAGTCCCGATaGCCAATCTGGTCACAGAGG +
Preference number: 2 (lower is better)
Translates to: AFSNCSLYSCSSTRLLFRTSKSR*PIWSQR
Trigger: CCTCTGTGACCAGATTGGCCATCGGGACTTTGATGT...GCGGAACAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATAGCCTCTCCTCGCATTaGTGCAGACGCTTTCTGAGG +
Preference number: 2 (lower is better)
Translates to: SGDVFVLREARGEEAGSNSLSSH*CRRFLR
Trigger: CCTCAGAAAGCGTCTGCAGCAATGCGAGGAGAGGCT...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATTGCAGCCTGTACAGCTaGTCATCCACCAGGCTCTTG +
Preference number: 2 (lower is better)
Translates to: SGDVFVLREARGEEAGSNCSLYS*SSTRLL
Trigger: CAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCA...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGAGGTCCTTGTGCTTCTaGATCAGCTCATTCAGGTCA +
Preference number: 2 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVRSLCF*ISSFRS
Trigger: TGACCTGAATGAGCTGATGCAGAAGCACAAGGACCT...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATTCCTCACGGTCCTTCTaGTGCATCTGCTTCATCCGC +
Preference number: 2 (lower is better)
Translates to: SGDVFVLREARGEEAGSNSSRSF*CICFIR
Trigger: GCGGATGAAGCAGATGCACCAGAAGGACCGTGAGGA...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGGAATCTTCAGCTTCTTaGATTCCTGGCGAGACAGAA +
Preference number: 2 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVESSAS*IPGETE
Trigger: TTCTGTCTCGCCAGGAATTCAAGAAGCTGAAGATTC...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATGCTGCAGACGCTTTCTaGGGAACTCGTTCTCCATCT +
Preference number: 2 (lower is better)
Translates to: SGDVFVLREARGEEAGSNAADAF*GTRSPS
Trigger: AGATGGAGAACGAGTTCCTCAGAAAGCGTCTGCAGC...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTCATCCCCGCAGGATATaGCTCTGTGGGCTCATCTCG +
Preference number: 2 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSHPRRI*LCGLIS
Trigger: CGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
3UTR-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACATCCCCGCAGGATATaGCTCTGTGGGCTCATCTCG +
Preference number: 2 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASHPRRI*LCGLIS
Trigger: CGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR-3UTR GCA 90 bp TGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCATGCTGGTCAGGGCCCAAACGTCATTTaGTGGATGATCTGTCGAAGG +
Preference number: 2 (lower is better)
Translates to: WYQAVDKVQPGPFDHAGQGPNVI*WMICRR
Trigger: CCTTCGACAGATCATCCAGCAAATGACGTTTGGGCC...CTGACCAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGCCAAACGTCATTTGCTaGATGATCTGTCGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: STQSTPVILSPELVSSSSPNVIC*MICRRW
Trigger: CCACCTTCGACAGATCATCCAGCAAATGACGTTTGG...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCTTGGGCTTGGCTCTGTaGAGCCAGCCCGTGAGGTCG +
Preference number: 2 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFLGLAL*SQPVRS
Trigger: CGACCTCACGGGCTGGCTCCACAGAGCCAAGCCCAA...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp GGTATCCTCAAGGTCACAGGTAAGATGGTGGCACTTCCTCTTCAGTaGGTGAGCCATCTTCTTGGCCCCGTCATAAGCACTTTGCAACTC +
Preference number: 2 (lower is better)
Translates to: GILKVTGKMVALPLQ*VSHLLGPVISTLQL
Trigger: GAGTTGCAAAGTGCTTATGACGGGGCCAAGAAGATGGCTCACCAACTGAAGAGGAAGTGCCACCATCTTACCTGTGACCTTGAGGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATAGCAGATCTGTGTTCTaGCGGAGTTCATTCCGCAAC +
Preference number: 2 (lower is better)
Translates to: SGDVFVLREARGEEAGSNSRSVF*RSSFRN
Trigger: GTTGCGGAATGAACTCCGGCAGAACACAGATCTGCT...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATGGTGAGCCATCTTCTTaGCCCCGTCATAAGCACTTT +
Preference number: 2 (lower is better)
Translates to: SGDVFVLREARGEEAGSNGEPSS*PRHKHF
Trigger: AAAGTGCTTATGACGGGGCCAAGAAGATGGCTCACC...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp CTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGGCTTGTCCAACTTGGCCCTTTaGATGTCTGTGATCCCACCA +
Preference number: 2 (lower is better)
Translates to: LQVIVESGSLQGQLQGGLSNLAL*MSVIPP
Trigger: TGGTGGGATCACAGACATGCAAAGGGCCAAGTTGGA...CAAGCCTCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
3UTR-3UTR GCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATTTCTGGACTTGTTCATaGTTGCTCTTGAGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: SGDVFVLREARGEEAGSNFWTCS*LLLSSW
Trigger: CCAGGAGCTCAAGAGCAAGCATGAACAAGTCCAGAA...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATTCACAGGTAAGATGGTaGCACTTCCTCTTCAGTTGG +
Preference number: 2 (lower is better)
Translates to: SGDVFVLREARGEEAGSNSQVRW*HFLFSW
Trigger: CCAACTGAAGAGGAAGTGCCACCATCTTACCTGTGA...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp GCAAGTGGACTCCACTATTCTGAAGGTCTCTTCCAACTTGGCCCTTaGCATGTCTGTGATCCCACCACGGATCTTCTGTCATTATGTGGA +
Preference number: 2 (lower is better)
Translates to: ASGLHYSEGLFQLGP*HVCDPTTDLLSLCG
Trigger: TCCACATAATGACAGAAGATCCGTGGTGGGATCACAGACATGCAAAGGGCCAAGTTGGAAGAGACCTTCAGAATAGTGGAGTCCACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
3UTR-3UTR TCA 90 bp CAAGTAGTTACTTATCCTGCATTGTTGCTCTGTGATTTTTGTACTTGTTCCCTCGCTCATCTCGCCTCTTaGGGGTGGCCATGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: QVVTYPALLLCDFCTCSLAHLAS*GWPCWL
Trigger: CAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGC...GAGGGAACAAGTACAAAAATCACAGAGCAACAATGCAGGATAAGTAACTACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540454.1
3UTR-3UTR CCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCGCCTTGAGAAAAACTTaGCTGTGCCCCACAGCCACC +
Preference number: 2 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFALRKT*LCPTAT
Trigger: GGTGGCTGTGGGGCACAGCCAAGTTTTTCTCAAGGC...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 90 bp TATGCAATGCAAGTGGACTCCACTATTCTGAAGGTCTCTTCCAACTaGGCCCTTTGCATGTCTGTGATCCCACCACGGATCTTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: YAMQVDSTILKVSSN*ALCMSVIPPRIFCH
Trigger: ATGACAGAAGATCCGTGGTGGGATCACAGACATGCAAAGGGCCAAGTTGGAAGAGACCTTCAGAATAGTGGAGTCCACTTGCATTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
3UTR-3UTR CCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCAGCAGCTCCCGTTTATaGTCCTGTAGCATCTCCACC +
Preference number: 2 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFSSSRL*SCSIST
Trigger: GGTGGAGATGCTACAGGACCATAAACGGGAGCTGCT...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR TCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCACGTCATTTGCTGGATaGTCTGTCGAAGGTGGTGCT +
Preference number: 2 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFTSFAG*SVEGGA
Trigger: AGCACCACCTTCGACAGATCATCCAGCAAATGACGT...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR GCA 90 bp TCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGGCTTCTTATCCTGCATTGTTaGTCTGTGATTTTTGTACTT +
Preference number: 2 (lower is better)
Translates to: SPSYCRVGKSSRAASRRLLILHC*SVIFVL
Trigger: AAGTACAAAAATCACAGAGCAACAATGCAGGATAAG...AAGCCTCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540454.1
3UTR-3UTR CCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGACACACAGTTTGGGTTaGTTCTATTCTAACAGTCCT +
Preference number: 2 (lower is better)
Translates to: SFISFLNACTHLYIHRIETHSLG*FYSNSP
Trigger: AGGACTGTTAGAATAGAACCAACCCAAACTGTGTGT...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
3UTR CCA 72 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTaGCTCTGGCCACCGGGGAGGCCTGGCCAGTCTCTC +
Preference number: 3 (lower is better)
Translates to: GLISPLEGGHAG*LWPPGRPGQSL
Trigger: GAGAGACTGGCCAGGCCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
3UTR CCA 72 bp GTGGCCGCCCGGTCCTTGCCCTGGTGCCGGGGGTTCTaGAAGCCTGGAGAGTCCACCACCATGATGGAGGCC +
Preference number: 3 (lower is better)
Translates to: VAARSLPWCRGF*KPGESTTMMEA
Trigger: GGCCTCCATCATGGTGGTGGACTCTCCAGGCTTCCAGAACCCCCGGCACCAGGGCAAGGACCGGGCGGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp CCTTCAGCTCTTCCAGGCGCCGCTGGTAGTACTGGCTaGTCTCCCGCTGCTGGGACTCGGAGGTGGCCGCCT +
Preference number: 3 (lower is better)
Translates to: PSALPGAAGSTG*SPAAGTRRWPP
Trigger: AGGCGGCCACCTCCGAGTCCCAGCAGCGGGAGAGCAGCCAGTACTACCAGCGGCGCCTGGAAGAGCTGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp GGTGCATCCAGGGCCGAGAGGTTGGGCTTGGCTCTGTaGAGCCAGCCCGTGAGGTCGTACCGCACAGGGTCC +
Preference number: 3 (lower is better)
Translates to: GASRAERLGLAL*SQPVRSYRTGS
Trigger: GGACCCTGTGCGGTACGACCTCACGGGCTGGCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGGATGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp CCCTGGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGCGAGACAGAAAGCCCTaGCAAGCCGCCTGGAAGAGA +
Preference number: 3 (lower is better)
Translates to: PWLSPLGGRSLATVTRKSRDRKP*QAAWKR
Trigger: TCTCTTCCAGGCGGCTTGCAAGGGCTTTCTGTCTCG...CGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp CCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTaGGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGG +
Preference number: 3 (lower is better)
Translates to: PQDMPLWAHLAS*GWPCWLALATG
Trigger: CCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
3UTR TCA 72 bp GCTCTCCCGCTGCTGGGACTCGGAGGTGGCCGCCTGTaGAAGCTCCTCCCCCATCTTGATCAGGCTGTCCCG +
Preference number: 3 (lower is better)
Translates to: ALPLLGLGGGRL*KLLPHLDQAVP
Trigger: CGGGACAGCCTGATCAAGATGGGGGAGGAGCTTTCACAGGCGGCCACCTCCGAGTCCCAGCAGCGGGAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp CCTCCGGAGCCCTTCCACGAACTCCGAGAGGGCCGCTaGAGGACTGGGCAGCTTTTCCCTCGACAGCGGGGA +
Preference number: 3 (lower is better)
Translates to: PPEPFHELREGR*RTGQLFPRQRG
Trigger: TCCCCGCTGTCGAGGGAAAAGCTGCCCAGTCCTTCAGCGGCCCTCTCGGAGTTCGTGGAAGGGCTCCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp GGGAGCACGGGGCTTTCCTCCTCACCGCGGCAAGGCTaGTGGCAAAGGTCCTCCTCACCATGCGGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: GSTGLSSSPRQG*WQRSSSPCGSS
Trigger: AGAGGAGCCGCATGGTGAGGAGGACCTTTGCCAGCAGCCTTGCCGCGGTGAGGAGGAAAGCCCCGTGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp CCTCAGTGCTGGGATATCCAGGGCCAGAGGTCCACCTaGCCCAGGCTTGTCTCTACCAGGCTGCGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: PQCWDIQGQRST*PRLVSTRLRWW
Trigger: CCACCACCGCAGCCTGGTAGAGACAAGCCTGGGGCAGGTGGACCTCTGGCCCTGGATATCCCAGCACTGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp AGCACGGGGCTTTCCTCCTCACCGCGGCAAGGCTGCTaGCAAAGGTCCTCCTCACCATGCGGCTCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: STGLSSSPRQGC*QRSSSPCGSSA
Trigger: TGCAGAGGAGCCGCATGGTGAGGAGGACCTTTGCCAGCAGCCTTGCCGCGGTGAGGAGGAAAGCCCCGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp CAGAGGACTCCAGACACCGCCTCCGAGGACGCAGTGTaGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAG +
Preference number: 3 (lower is better)
Translates to: QRTPDTASEDAV*ATTACPWVWSE
Trigger: CTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAGGCGGTGTCTGGAGTCCTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp TATGCTCGCAACATCGTCGTCTTTCCTCCCCGTCCCTaGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACC +
Preference number: 3 (lower is better)
Translates to: YARNIVVFPPRP*LSPLGGRSLAT
Trigger: GGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGGACGGGGAGGAAAGACGACGATGTTGCGAGCATA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCGGCTCATCTCGCCTCTaGAGGGTGGCCATGCTGGCT +
Preference number: 3 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFGSSRL*RVAMLA
Trigger: AGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCC...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp CGGAGGTGGCCGCCTGTGAAAGCTCCTCCCCCATCTTaGTCAGGCTGTCCCGAAGCCGGATCACCAGGACCT +
Preference number: 3 (lower is better)
Translates to: RRWPPVKAPPPS*SGCPEAGSPGP
Trigger: AGGTCCTGGTGATCCGGCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGCTTTCACAGGCGGCCACCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATaGCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGC +
Preference number: 3 (lower is better)
Translates to: PTTLGAQHPRRI*LCGLISPLEGG
Trigger: GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR GCA 72 bp CTCCAGGATGTGGAACCCAGCAAGCTGGACCCTCAGTaGTGGGATATCCAGGGCCAGAGGTCCACCTGCCCC +
Preference number: 3 (lower is better)
Translates to: LQDVEPSKLDPQ*WDIQGQRSTCP
Trigger: GGGGCAGGTGGACCTCTGGCCCTGGATATCCCAGCACTGAGGGTCCAGCTTGCTGGGTTCCACATCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCATGTCGAAGGTGGTGCTaGAAGGTGGCCGTGTTCAGC +
Preference number: 3 (lower is better)
Translates to: VDRALLSANADWVLSVSPCRRWC*KVAVFS
Trigger: GCTGAACACGGCCACCTTCAAGCACCACCTTCGACA...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCACACCATGGCCAGTCCTaGACTGCGAGGAACACAGCC +
Preference number: 3 (lower is better)
Translates to: EDAVWATTACPWVWSESSHHGQS*TARNTA
Trigger: GGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGTG...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp ACGATGGAGCCGGAGGATGAGGACGAGTCAGACAGGTaGGCGGGATCCTCCTTGGGCTCCGGGCTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: TMEPEDEDESDR*AGSSLGSGLFF
Trigger: GAAGAAGAGCCCGGAGCCCAAGGAGGATCCCGCTCACCTGTCTGACTCGTCCTCATCCTCCGGCTCCATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp AGAGGTCCACCTGCCCCAGGCTTGTCTCTACCAGGCTaGGGTGGTGGTGGAGATTCCTGCCCACTCCTGCTT +
Preference number: 3 (lower is better)
Translates to: RGPPAPGLSLPG*GGGGDSCPLLL
Trigger: AAGCAGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGTAGAGACAAGCCTGGGGCAGGTGGACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp CTTGCTGTGGACATTGGTGGACCGGGCTCTGCTCAGTaGCAATGCCGACTGGGTCCTCTCAGTGTCCCCAGC +
Preference number: 3 (lower is better)
Translates to: LAVDIGGPGSAQ*QCRLGPLSVPS
Trigger: GCTGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCACCAATGTCCACAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp CTCCGCAGCTCCTCTCTTTTTGACTGGTGCAGGACCTaGGGTGCATCCAGGGCCGAGAGGTTGGGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: LRSSSLFDWCRT*GASRAERLGLA
Trigger: AGCCAAGCCCAACCTCTCGGCCCTGGATGCACCCCAGGTCCTGCACCAGTCAAAAAGAGAGGAGCTGCGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp TGCCCCAGGCTTGTCTCTACCAGGCTGCGGTGGTGGTaGAGATTCCTGCCCACTCCTGCTTTCCACCACAGG +
Preference number: 3 (lower is better)
Translates to: CPRLVSTRLRWW*RFLPTPAFHHR
Trigger: CCTGTGGTGGAAAGCAGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGTAGAGACAAGCCTGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp ACCTGCCCCAGGCTTGTCTCTACCAGGCTGCGGTGGTaGTGGAGATTCCTGCCCACTCCTGCTTTCCACCAC +
Preference number: 3 (lower is better)
Translates to: TCPRLVSTRLRW*WRFLPTPAFHH
Trigger: GTGGTGGAAAGCAGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGTAGAGACAAGCCTGGGGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp GAGCGTCCAGCACCTGGAATTGCCGGCGGAAGCGAGTaGGCCCCATGTGGTCAGCATAGCCTGTCCTATGCA +
Preference number: 3 (lower is better)
Translates to: ERPAPGIAGGSE*APCGQHSLSYA
Trigger: TGCATAGGACAGGCTATGCTGACCACATGGGGCTCACTCGCTTCCGCCGGCAATTCCAGGTGCTGGACGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp GGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTaGGGCTGGTGGACCTCAAGAGACCACCAGCGGCCC +
Preference number: 3 (lower is better)
Translates to: GLCPQHRLKRCI*GWWTSRDHQRP
Trigger: GGGCCGCTGGTGGTCTCTTGAGGTCCACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp ATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATCTaGGAGCACGGGGCTTTCCTCCTCACCGCGGCAAGG +
Preference number: 3 (lower is better)
Translates to: IMLVSASICSLI*EHGAFLLTAAR
Trigger: CCTTGCCGCGGTGAGGAGGAAAGCCCCGTGCTCCCAGATCAAGCTGCAGATGGATGCGCTGACCAGCATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp GCCCTTCCACGAACTCCGAGAGGGCCGCTGAAGGACTaGGCAGCTTTTCCCTCGACAGCGGGGATGTATTTG +
Preference number: 3 (lower is better)
Translates to: ALPRTPRGPLKD*AAFPSTAGMYL
Trigger: CAAATACATCCCCGCTGTCGAGGGAAAAGCTGCCCAGTCCTTCAGCGGCCCTCTCGGAGTTCGTGGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp GACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTaGTCGGAGAGCTCAGTTTTCTCCCCATGCTCGGTC +
Preference number: 3 (lower is better)
Translates to: DAVWATTACPWV*SESSVFSPCSV
Trigger: GACCGAGCATGGGGAGAAAACTGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp TCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTaGGTGTGGTCGGAGAGCTCAGTTTTCTCCCCATGC +
Preference number: 3 (lower is better)
Translates to: SEDAVWATTACP*VWSESSVFSPC
Trigger: GCATGGGGAGAAAACTGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp GGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGTaGGATTCCTGGTCGACTTTTGATGCTGTCAGCACT +
Preference number: 3 (lower is better)
Translates to: GGRSLATVTRKS*DSWSTFDAVST
Trigger: AGTGCTGACAGCATCAAAAGTCGACCAGGAATCCCACGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGAGGAAAAGGATCTGTaGATGAGTGAGACCACAGCC +
Preference number: 3 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPEEKDL*MSETTA
Trigger: GGCTGTGGTCTCACTCATCAACAGATCCTTTTCCTC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTTCCAGGGCCGAGAGGTaGGGCTTGGCTCTGTGGAGC +
Preference number: 3 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLSRAER*GLALWS
Trigger: GCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGGA...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCACACACAGGAGGCAGCTaGGCCCGGGCCTGGAATAGA +
Preference number: 3 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPHTGGS*ARAWNR
Trigger: TCTATTCCAGGCCCGGGCCAAGCTGCCTCCTGTGTG...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp TCCTCCTCCTGGTCCTCACGGTCCTTCTGGTGCATCTaGTTCATCCGCTCGATCTCCAGCTCAAACCGCTGG +
Preference number: 3 (lower is better)
Translates to: SSSWSSRSFWCI*FIRSISSSNRW
Trigger: CCAGCGGTTTGAGCTGGAGATCGAGCGGATGAAGCAGATGCACCAGAAGGACCGTGAGGACCAGGAGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp AGGCTCTTGTTCCGCGTCATGTTCTCCAGCTCGCTGTaGATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGC +
Preference number: 3 (lower is better)
Translates to: RLLFRVMFSSSL*MLSRSAVSTFC
Trigger: GCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAGCTGGAGAACATGACGCGGAACAAGAGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp CTGAGGTCTTGCTGTGGACATTGGTGGACCGGGCTCTaGTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGT +
Preference number: 3 (lower is better)
Translates to: LRSCCGHWWTGL*SVPMPTGSSQC
Trigger: ACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCACCAATGTCCACAGCAAGACCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp TATTCCCTCGGAGGTCGACATGAGCTTCTTCAGGAGTaGAGCGTCCAGCACCTGGAATTGCCGGCGGAAGCG +
Preference number: 3 (lower is better)
Translates to: YSLGGRHELLQE*SVQHLELPAEA
Trigger: CGCTTCCGCCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTCCGAGGGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp CTTCCAAGGCAGCCTGCAGGTCGGCAATCCGCCGAATaGATGTCTCCAGGTCTGTCTGGAGGGTTTGCCTCA +
Preference number: 3 (lower is better)
Translates to: LPRQPAGRQSAE*MSPGLSGGFAS
Trigger: TGAGGCAAACCCTCCAGACAGACCTGGAGACATCCATTCGGCGGATTGCCGACCTGCAGGCTGCCTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp GGAGGGAACCAAGCAGCTGCCACCATGGCCAGTCCTTaGCTGCGAGGAACACAGCCACATTCTTCTGGATGC +
Preference number: 3 (lower is better)
Translates to: GGNQAAATMASP*LRGTQPHSSGC
Trigger: GCATCCAGAAGAATGTGGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGTGGCAGCTGCTTGGTTCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp GCTCACTCTCCAGCACCTGGCAGGCCACATCACCTTTaGAGCGCTCATCGGCAAGGTCAGAGGTCAAGTCAG +
Preference number: 3 (lower is better)
Translates to: AHSPAPGRPHHL*SAHRQGQRSSQ
Trigger: CTGACTTGACCTCTGACCTTGCCGATGAGCGCTTCAAAGGTGATGTGGCCTGCCAGGTGCTGGAGAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp CTGGCTGTCAGCTCCGAGTCCAGCCTCTCCTCGCATTaGTGCAGACGCTTTCTGAGGAACTCGTTCTCCATC +
Preference number: 3 (lower is better)
Translates to: LAVSSESSLSSH*CRRFLRNSFSI
Trigger: GATGGAGAACGAGTTCCTCAGAAAGCGTCTGCAGCAATGCGAGGAGAGGCTGGACTCGGAGCTGACAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp CTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTaGGTCTTCAAGGCCTCCTCACACTTGGCTTCACTC +
Preference number: 3 (lower is better)
Translates to: LCMLSRSAVSTF*VFKASSHLASL
Trigger: GAGTGAAGCCAAGTGTGAGGAGGCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp TCGAGGCCCCATCGGCTTGGCCCAAACGTCATTTGCTaGATGATCTGTCGAAGGTGGTGCTTGAAGGTGGCC +
Preference number: 3 (lower is better)
Translates to: SRPHRLGPNVIC*MICRRWCLKVA
Trigger: GGCCACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp TCGGCAATCCGCCGAATGGATGTCTCCAGGTCTGTCTaGAGGGTTTGCCTCACTGCTGCAAGTTCCTCCACG +
Preference number: 3 (lower is better)
Translates to: SAIRRMDVSRSV*RVCLTAASSST
Trigger: CGTGGAGGAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGACCTGGAGACATCCATTCGGCGGATTGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp GCGGTTCTGGAAAACAAGCGGCTCCTTTCCAAGGTCTaGACAGCCCGCATCGTCCACAGAGGACTCCAGACA +
Preference number: 3 (lower is better)
Translates to: AVLENKRLLSKV*TARIVHRGLQT
Trigger: TGTCTGGAGTCCTCTGTGGACGATGCGGGCTGTCCAGACCTTGGAAAGGAGCCGCTTGTTTTCCAGAACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp CCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTaGGGCTTCCGGATAGCTGGGAGGAAGTCATCGAAG +
Preference number: 3 (lower is better)
Translates to: PPLADPAKEVGV*GFRIAGRKSSK
Trigger: CTTCGATGACTTCCTCCCAGCTATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATGTCCAGCACCTGGAATaGCCGGCGGAAGCGAGTGAG +
Preference number: 3 (lower is better)
Translates to: SGDVFVLREARGEEAGSNVQHLE*PAEASE
Trigger: CTCACTCGCTTCCGCCGGCAATTCCAGGTGCTGGAC...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGTGGGGAGAAACAGGCTaGTCTCCTGAGGTCTTGCTG +
Preference number: 3 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVWGETG*SPEVLL
Trigger: CAGCAAGACCTCAGGAGACAAGCCTGTTTCTCCCCA...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp CGGCCTTCCTTTCATCTATTCCCTCGGAGGTCGACATaGGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGA +
Preference number: 3 (lower is better)
Translates to: RPSFHLFPRRST*ASSGVERPAPG
Trigger: TCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTCCGAGGGAATAGATGAAAGGAAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp CCAGCTGGCTGTGCACTTTCTCCAGCTCCTCCTTGCTaGCTGATGTCTTGCCATCCTCCATGGTGCCCAGAA +
Preference number: 3 (lower is better)
Translates to: PAGCALSPAPPC*LMSCHPPWCPE
Trigger: TTCTGGGCACCATGGAGGATGGCAAGACATCAGTCAGCAAGGAGGAGCTGGAGAAAGTGCACAGCCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp GTCAGCACTTTTGAAGGACACGATGGAGCCGGAGGATaGGGACGAGTCAGACAGGTGAGCGGGATCCTCCTT +
Preference number: 3 (lower is better)
Translates to: VSTFEGHDGAGG*GRVRQVSGILL
Trigger: AAGGAGGATCCCGCTCACCTGTCTGACTCGTCCTCATCCTCCGGCTCCATCGTGTCCTTCAAAAGTGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp TCCTCGAGGCCCCATCGGCTTGGCCCAAACGTCATTTaGTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: SSRPHRLGPNVI*WMICRRWCLKV
Trigger: CACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTCGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp TCCAGTTCCTCCTCCTGGTCCTCACGGTCCTTCTGGTaGATCTGCTTCATCCGCTCGATCTCCAGCTCAAAC +
Preference number: 3 (lower is better)
Translates to: SSSSSWSSRSFW*ICFIRSISSSN
Trigger: GTTTGAGCTGGAGATCGAGCGGATGAAGCAGATGCACCAGAAGGACCGTGAGGACCAGGAGGAGGAACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp TCATCGATGCGCTTCAGGAGGTCCGCCTTCTCAAACTaGAGCCTGTACAGCTGCTCATCCACCAGGCTCTTG +
Preference number: 3 (lower is better)
Translates to: SSMRFRRSAFSN*SLYSCSSTRLL
Trigger: CAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATCGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp GCATCAGCTCATTCAGGTCATCCTGGTCCTCATCGATaGGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCC +
Preference number: 3 (lower is better)
Translates to: ASAHSGHPGPHR*ASGGPPSQTAA
Trigger: GGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATCGATGAGGACCAGGATGACCTGAATGAGCTGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp TCTGTCTTGTTCTCTAGGTCACAGATGACCGCCTCCTaGCTGCTGACGATGGCTCGATCCACGGTGGACTGT +
Preference number: 3 (lower is better)
Translates to: SVLFSRSQMTAS*LLTMARSTVDC
Trigger: ACAGTCCACCGTGGATCGAGCCATCGTCAGCAGGCAGGAGGCGGTCATCTGTGACCTAGAGAACAAGACAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp AGATTCCTGCCCACTCCTGCTTTCCACCACAGGGTTTaGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCT +
Preference number: 3 (lower is better)
Translates to: RFLPTPAFHHRV*YQAVDKVQPGP
Trigger: AGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCAAACCCTGTGGTGGAAAGCAGGAGTGGGCAGGAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp GCAGCCAGTCGGCGAATCTTCAGCTTCTTGAATTCCTaGCGAGACAGAAAGCCCTTGCAAGCCGCCTGGAAG +
Preference number: 3 (lower is better)
Translates to: AASRRIFSFLNS*RDRKPLQAAWK
Trigger: CTTCCAGGCGGCTTGCAAGGGCTTTCTGTCTCGCCAGGAATTCAAGAAGCTGAAGATTCGCCGACTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp AGCTGGCCTAGCTCCCACCGGACACTGGTGTTCTCCTaGGTCACTTTCTCACGGAGACCCTTCTCAAACACT +
Preference number: 3 (lower is better)
Translates to: SWPSSHRTLVFS*VTFSRRPFSNT
Trigger: AGTGTTTGAGAAGGGTCTCCGTGAGAAAGTGACCCAGGAGAACACCAGTGTCCGGTGGGAGCTAGGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp CTGAATGGGTCACTGCCTAGAGGTTCCTCCATCAGGTaGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCC +
Preference number: 3 (lower is better)
Translates to: LNGSLPRGSSIR*ANWRFWKTSGS
Trigger: GGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCTCTAGGCAGTGACCCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATAGAGATCACACCTGCCTaGAGAAAAACTTGGCTGTGC +
Preference number: 3 (lower is better)
Translates to: CPPLADPAKEVGVWGFRIEITPA*RKTWLC
Trigger: GCACAGCCAAGTTTTTCTCAAGGCAGGTGTGATCTC...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGGCACTTCCTCTTCAGTaGGTGAGCCATCTTCTTGGC +
Preference number: 3 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVALPLQ*VSHLLG
Trigger: GCCAAGAAGATGGCTCACCAACTGAAGAGGAAGTGC...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTGTCTGTCTGGAGGGTTaGCCTCACTGCTGCAAGTTC +
Preference number: 3 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLVCLEG*PHCCKF
Trigger: GAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGAC...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp TGCTGCAGACGCTTTCTGAGGAACTCGTTCTCCATCTaGGCACAGTCGAAGCGCATCTGCCACTCGTCTGCT +
Preference number: 3 (lower is better)
Translates to: CCRRFLRNSFSI*AQSKRICHSSA
Trigger: AGCAGACGAGTGGCAGATGCGCTTCGACTGTGCTCAGATGGAGAACGAGTTCCTCAGAAAGCGTCTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp CTTAGCGTTGTAAGCTCCTCCTCCTTGGCTCGGAGCTaGTCAGTTCCAATGGTGGCACTAAGTAGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: LSVVSSSSLARS*SVPMVALSRGW
Trigger: CCAGCCTCTACTTAGTGCCACCATTGGAACTGAGCAGCTCCGAGCCAAGGAGGAGGAGCTTACAACGCTAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp TGGCTCGATCCACGGTGGACTGTTCCAGGTACTCGATaGGCATCTGAGCCACCTGCAGTTGTTCTTGTAGCT +
Preference number: 3 (lower is better)
Translates to: WLDPRWTVPGTR*ASEPPAVVLVA
Trigger: AGCTACAAGAACAACTGCAGGTGGCTCAGATGCGCATCGAGTACCTGGAACAGTCCACCGTGGATCGAGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp TGCCGTCTGGACACTCTCAGTATCACTGTCACTGGATaGCACTTCTTCCAAGGCAGCCTGCAGGTCGGCAAT +
Preference number: 3 (lower is better)
Translates to: CRLDTLSITVTG*HFFQGSLQVGN
Trigger: ATTGCCGACCTGCAGGCTGCCTTGGAAGAAGTGGCATCCAGTGACAGTGATACTGAGAGTGTCCAGACGGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp CAGTCCTTGACTGCGAGGAACACAGCCACATTCTTCTaGATGCACTGTGCAGCCAGTCGGCGAATCTTCAGC +
Preference number: 3 (lower is better)
Translates to: QSLTARNTATFF*MHCAASRRIFS
Trigger: GCTGAAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGTGTTCCTCGCAGTCAAGGACTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp CGGAGACCCTTCTCAAACACTGACTCACCTAGGGCCTaGGCCAGCTGCAGGTCAAACTTCTTCTGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: RRPFSNTDSPRA*ASCRSNFFCFF
Trigger: GAAGAAGCAGAAGAAGTTTGACCTGCAGCTGGCCCAGGCCCTAGGTGAGTCAGTGTTTGAGAAGGGTCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp TCACTGCCTAGAGGTTCCTCCATCAGGTGGGCAAACTaGCGGTTCTGGAAAACAAGCGGCTCCTTTCCAAGG +
Preference number: 3 (lower is better)
Translates to: SLPRGSSIRWAN*RFWKTSGSFPR
Trigger: CCTTGGAAAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCTCTAGGCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp TCGCTCGCCACCGTCACCCGCAAGTCGTGGGATTCCTaGTCGACTTTTGATGCTGTCAGCACTTTTGAAGGA +
Preference number: 3 (lower is better)
Translates to: SLATVTRKSWDS*STFDAVSTFEG
Trigger: TCCTTCAAAAGTGCTGACAGCATCAAAAGTCGACCAGGAATCCCACGACTTGCGGGTGACGGTGGCGAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp GCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCACCAGGCTCTTGTTCCGCTGGCCCAAACGTCATTaGCTGGATGATCTGTCGAAG +
Preference number: 3 (lower is better)
Translates to: AFSNCSLYSCSSTRLLFRWPKRH*LDDLSK
Trigger: CTTCGACAGATCATCCAGCAAATGACGTTTGGGCCA...GCGGAACAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGCCCGTCATAAGCACTTaGCAACTCCCCAAGCTTTTG +
Preference number: 3 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVPVIST*QLPKLL
Trigger: CAAAAGCTTGGGGAGTTGCAAAGTGCTTATGACGGG...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp TCCACGGTGGACTGTTCCAGGTACTCGATGCGCATCTaGGCCACCTGCAGTTGTTCTTGTAGCTTGTGCTTC +
Preference number: 3 (lower is better)
Translates to: STVDCSRYSMRI*ATCSCSCSLCF
Trigger: GAAGCACAAGCTACAAGAACAACTGCAGGTGGCTCAGATGCGCATCGAGTACCTGGAACAGTCCACCGTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp TCTTGCGTTCGTAGTCGAGGCTTGGGAGTTTCCAGCTaGATGGGTCACTGCCTAGAGGTTCCTCCATCAGGT +
Preference number: 3 (lower is better)
Translates to: SCVRSRGLGVSS*MGHCLEVPPSG
Trigger: ACCTGATGGAGGAACCTCTAGGCAGTGACCCATTCAGCTGGAAACTCCCAAGCCTCGACTACGAACGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp ATCCATCTCTTTTCGGCCGCTGCTGCCACAATCCACTaGCGTCTGGACACTCTCAGTATCACTGTCACTGGA +
Preference number: 3 (lower is better)
Translates to: IHLFSAAAATIH*RLDTLSITVTG
Trigger: TCCAGTGACAGTGATACTGAGAGTGTCCAGACGGCAGTGGATTGTGGCAGCAGCGGCCGAAAAGAGATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp GGATGGAGACGTTATCCATCTCTTTTCGGCCGCTGCTaGCACAATCCACTGCCGTCTGGACACTCTCAGTAT +
Preference number: 3 (lower is better)
Translates to: GWRRYPSLFGRC*HNPLPSGHSQY
Trigger: ATACTGAGAGTGTCCAGACGGCAGTGGATTGTGGCAGCAGCGGCCGAAAAGAGATGGATAACGTCTCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp GCACAGGAACACCTTCCTCTTGATATCGCTGTAGCGTaGAGACAAAGGTCCGCTGGTAGAACAGCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: AQEHLPLDIAVA*RQRSAGRTAAA
Trigger: TGCAGCTGCTGTTCTACCAGCGGACCTTTGTCTCCACGCTACAGCGATATCAAGAGGAAGGTGTTCCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp GGTGGCACTTCCTCTTCAGTTGGTGAGCCATCTTCTTaGCCCCGTCATAAGCACTTTGCAACTCCCCAAGCT +
Preference number: 3 (lower is better)
Translates to: GGTSSSVGEPSS*PRHKHFATPQA
Trigger: AGCTTGGGGAGTTGCAAAGTGCTTATGACGGGGCCAAGAAGATGGCTCACCAACTGAAGAGGAAGTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCAGTCAACACTTTATTTaGTTCAGGCCAACCACACTG +
Preference number: 3 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLSQHFI*FRPTTL
Trigger: CAGTGTGGTTGGCCTGAACAAAATAAAGTGTTGACT...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR-3UTR CAA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATAGCTGCTCCAGCTGCTaGATGGTGTTTTCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: SGDVFVLREARGEEAGSNSCSSC*MVFSCW
Trigger: CCAGCAGGAAAACACCATCAAGCAGCTGGAGCAGCT...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp ACAGAAAGCCCTTGCAAGCCGCCTGGAAGAGAACGATaGTCTGAGATACCAGCTTCTCTCGCTGCTTCTCAA +
Preference number: 3 (lower is better)
Translates to: TESPCKPPGRER*SEIPASLAASQ
Trigger: TTGAGAAGCAGCGAGAGAAGCTGGTATCTCAGAGCATCGTTCTCTTCCAGGCGGCTTGCAAGGGCTTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp TGTAGCTTGTGCTTCTCCTTCTTGGCTTCCTCCAGCTaGAGCTGCAGTTCTTGGATCTGCCCAATGTCAGCA +
Preference number: 3 (lower is better)
Translates to: CSLCFSFLASSS*SCSSWICPMSA
Trigger: TGCTGACATTGGGCAGATCCAAGAACTGCAGCTGCAGCTGGAGGAAGCCAAGAAGGAGAAGCACAAGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp GTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTaGCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGT +
Preference number: 3 (lower is better)
Translates to: VSKWMLERCEPS*PPLADPAKEVG
Trigger: ACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp TGCTCCAGCTGCTTGATGGTGTTTTCCTGCTGGCTCTaGATTTTCTGTTGCTCAAGGGCGCTGGATTCCAAC +
Preference number: 3 (lower is better)
Translates to: CSSCLMVFSCWL*IFCCSRALDSN
Trigger: GTTGGAATCCAGCGCCCTTGAGCAACAGAAAATCCAGAGCCAGCAGGAAAACACCATCAAGCAGCTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR-3UTR CAA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGTCCACTCCTGTCATCTaGAGCCCTGAGCTGGTTTCC +
Preference number: 3 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRSTPVI*SPELVS
Trigger: GGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGA...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp TGCGAGGAACACAGCCACATTCTTCTGGATGCACTGTaGAGCCAGTCGGCGAATCTTCAGCTTCTTGAATTC +
Preference number: 3 (lower is better)
Translates to: CEEHSHILLDAL*SQSANLQLLEF
Trigger: GAATTCAAGAAGCTGAAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGTGTTCCTCGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp GAGAGAAAGGAACGGTTAGCCTCTTCCGTTTCAAAGTaGATGCTTGAACGCTGTGAACCGTCTTGCCCACCT +
Preference number: 3 (lower is better)
Translates to: ERKERLASSVSK*MLERCEPSCPP
Trigger: AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGCTAACCGTTCCTTTCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR GCA 72 bp GAACTGGTTCCTACTTCTGGAGGTATTTCTTCATTATaGTCGCAACATCGTCGTCTTTCCTCCCCGTCCCTG +
Preference number: 3 (lower is better)
Translates to: ELVPTSGGISSL*SQHRRLSSPSL
Trigger: CAGGGACGGGGAGGAAAGACGACGATGTTGCGAGCATAATGAAGAAATACCTCCAGAAGTAGGAACCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR TCA 72 bp TCTCTCCATATGCAATGCAAGTGGACTCCACTATTCTaGAGGTCTCTTCCAACTTGGCCCTTTGCATGTCTG +
Preference number: 3 (lower is better)
Translates to: SLHMQCKWTPLF*RSLPTWPFACL
Trigger: CAGACATGCAAAGGGCCAAGTTGGAAGAGACCTTCAGAATAGTGGAGTCCACTTGCATTGCATATGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
3UTR-3UTR CAA 90 bp TCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGGCTTAGTCAACACTTTATTTaGTTCAGGCCAACCACACTG +
Preference number: 3 (lower is better)
Translates to: SPSYCRVGKSSRAASRRLSQHFI*FRPTTL
Trigger: CAGTGTGGTTGGCCTGAACAAAATAAAGTGTTGACT...AAGCCTCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
3UTR GCA 72 bp AAGTCAGCAATCTTGCTTTCTAGCAGATCTGTGTTCTaGCGGAGTTCATTCCGCAACTTCTCTGATTTTTCT +
Preference number: 3 (lower is better)
Translates to: KSAILLSSRSVF*RSSFRNFSDFS
Trigger: AGAAAAATCAGAGAAGTTGCGGAATGAACTCCGGCAGAACACAGATCTGCTAGAAAGCAAGATTGCTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CCA 72 bp AGAAATGAATTGGCAAAGGAATATAATCGACAAGCATaGGGATTAAGGGAGCATGGAGGAGGAGCATTTGTT +
Preference number: 3 (lower is better)
Translates to: RNELAKEYNRQA*GLREHGGGAFV
Trigger: AACAAATGCTCCTCCTCCATGCTCCCTTAATCCCCATGCTTGTCGATTATATTCCTTTGCCAATTCATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
3UTR CCA 72 bp AGAAATAGAAGTATACACCCCAAACTACACACAGTTTaGGTTGGTTCTATTCTAACAGTCCTACCCCTATCT +
Preference number: 3 (lower is better)
Translates to: RNRSIHPKLHTV*VGSILTVLPLS
Trigger: AGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATACTTCTATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp CCCTGGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGCCGAGAGGTTGGGCTTaGCTCTGTGGAGCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PWLSPLGGRSLATVTRKSPRGWA*LCGASP
Trigger: CGGGCTGGCTCCACAGAGCCAAGCCCAACCTCTCGG...CGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGGCCGGCGGAAGCGAGTaGGCCCCATGTGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGAGGSE*APCGQH
Trigger: ATGCTGACCACATGGGGCTCACTCGCTTCCGCCGGC...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCCCGCCGGCTGGCCTCTaGCTCCCGCTGCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLPPAGL*LPLHQL
Trigger: GAGCTGGTGCAGCGGGAGGCAGAGGCCAGCCGGCGG...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCCGCCGGCTGGCCTCTaGCTCCCGCTGCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHPPAGL*LPLHQL
Trigger: GAGCTGGTGCAGCGGGAGGCAGAGGCCAGCCGGCGG...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGCATGCTGGCTGGCTCTaGCCACCGGGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPHAGWL*PPGRPG
Trigger: GCCAGGCCTCCCCGGTGGCCAGAGCCAGCCAGCATG...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCATGCTGGCTGGCTCTaGCCACCGGGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGHAGWL*PPGRPG
Trigger: GCCAGGCCTCCCCGGTGGCCAGAGCCAGCCAGCATG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGTGGCCATGCTGGCTaGCTCTGGCCACCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPGGHAG*LWPPGR
Trigger: CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTGTGGAGCCAGCCCGTaGGGTCGTACCGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRCGASP*GRTAQG
Trigger: ACCCTGTGCGGTACGACCTCACGGGCTGGCTCCACA...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCCGCCTCCTGCCTGCTaGCGATGGCTCGATCCACGG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGPPPAC*RWLDPR
Trigger: CCGTGGATCGAGCCATCGTCAGCAGGCAGGAGGCGG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGGCGGCTGCTGGTGGCTaGCTGTCGAGAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGAAAGG*LSRRSP
Trigger: AGGACTCCTTCTCGACAGTCAGCCACCAGCAGCCGC...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGCTCCTCTGCAGGGCCTaGTGGGAGGTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPLLCRA*WEVPSR
Trigger: CCTGGAGGGCACCTCCCAGCAGGCCCTGCAGAGGAG...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCCGCCGGCTGGCCTCTaGCTCCCGCTGCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGPPAGL*LPLHQL
Trigger: GAGCTGGTGCAGCGGGAGGCAGAGGCCAGCCGGCGG...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGTGGCACTGCGGCTGTaGGCCATGGACACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRVALRL*AMDTEP
Trigger: CGGCTCTGTGTCCATGGCCCACAGCCGCAGTGCCAC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGCCACGGTGGTCCCTaGGGAGGGGTCCGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLSHGGP*GGVREV
Trigger: GACCTCCCGGACCCCTCCCCAGGGACCACCGTGGCT...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGAGCCACGGTGGTCCCTaGGGAGGGGTCCGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWSHGGP*GGVREV
Trigger: GACCTCCCGGACCCCTCCCCAGGGACCACCGTGGCT...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCCATGCTGGCTGGCTCTaGCCACCGGGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFHAGWL*PPGRPG
Trigger: GCCAGGCCTCCCCGGTGGCCAGAGCCAGCCAGCATG...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCATGCTGGCTGGCTCTaGCCACCGGGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHHAGWL*PPGRPG
Trigger: GCCAGGCCTCCCCGGTGGCCAGAGCCAGCCAGCATG...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCGGTGGCCATGCTGGCTaGCTCTGGCCACCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLGGHAG*LWPPGR
Trigger: CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACC...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCCCGGAGGACAGTaGAGGTGGCTCGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGRPGGQ*RWLGSS
Trigger: AGAAGATCCGAGCCACCTTCACTGTCCTCCGGGCCT...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTGCTTCAGCTGCTGCTaGAGCTGGCCTAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGCFSCC*SWPSSH
Trigger: GTGGGAGCTAGGCCAGCTTCAGCAGCAGCTGAAGCA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGCTCCTCCCCCATCTTaGTCAGGCTGTCCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRAPPPS*SGCPEA
Trigger: GGCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCGTTTATCCTGGGGCTaGGGATGCGGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRRLSWG*GCGCWW
Trigger: CCACCAGCAGCCGCATCCTCAGCCCCAGGATAAACG...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR TCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGACGAGTCAGACAGGTaGGCGGGATCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRDESDR*AGSSLG
Trigger: GCCCAAGGAGGATCCCGCTCACCTGTCTGACTCGTC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACCTTTGCCCTCCTCCTaGGGGGCTGGCCCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSPLPSS*GAGPSW
Trigger: CCAAGACGGGCCAGCCCCGCAGGAGGAGGGCAAAGG...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCTTGGGCACCTTCCCTaGAGAAGGCACCGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGLGHLP*RRHRGP
Trigger: GGGCCCTCGGTGCCTTCTGCAGGGAAGGTGCCCAAG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGCCCAGGGCCACAATaGTCTGGTCTCTCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGSPGPQ*SGLSAG
Trigger: ACCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCT...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTCACACTGGAGGGGCTaGTCACAGGTCCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRSHWRG*SQVRRA
Trigger: TGCCCTGCGGACCTGTGAGCAGCCCCTCCAGTGTGA...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCCTCCTCTGCAGGGCCTaGTGGGAGGTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLLLCRA*WEVPSR
Trigger: CCTGGAGGGCACCTCCCAGCAGGCCCTGCAGAGGAG...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGGCCAGAGGTCCACCTaGCCCAGGCTTGTCTCTACC +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRGQRST*PRLVST
Trigger: GGTAGAGACAAGCCTGGGGCAGGTGGACCTCTGGCC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTGGCTGCTCTCCCGCTaGTGGGACTCGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLWLLSR*WDSEVA
Trigger: GGCCACCTCCGAGTCCCAGCAGCGGGAGAGCAGCCA...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGCGGGGAGTAGGGTTGTaGCCCCAACACCGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGRGVGL*PQHRLK
Trigger: CTTCAGACGGTGTTGGGGGCACAACCCTACTCCCCG...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCTTGGGCTTGGGGCCTaGTCCCCTGCCTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRLGLGA*SPACLC
Trigger: GCAAAGACAGGCAGGGGACCAGGCCCCAAGCCCAAG...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGCATCCCGGCGGCCCTTaGGCACCTTCCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPHPGGP*APSLQK
Trigger: CTTCTGCAGGGAAGGTGCCCAAGGGCCGCCGGGATG...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGTGGCACTGCGGCTGTaGGCCATGGACACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPVALRL*AMDTEP
Trigger: CGGCTCTGTGTCCATGGCCCACAGCCGCAGTGCCAC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGAGCTTGGCCCGGGCCTaGAATAGACTCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRSLARA*NRLRSS
Trigger: GGAGCTGCGGAGTCTATTCCAGGCCCGGGCCAAGCT...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTCTACCAGGCTGCGGTaGTGGTGGAGATTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGSTRLR*WWRFLP
Trigger: GGGCAGGAATCTCCACCACCACCGCAGCCTGGTAGA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGGTGGCCATGCTGGCTaGCTCTGGCCACCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGGGHAG*LWPPGR
Trigger: CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR CAA 72 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTaGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGG +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRL*RVAMLAGSGHR
Trigger: CCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCATGAGATGGCCATGCTaGGGCAGTGCCAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGMRWPC*GSARAV
Trigger: CACGGCCCTGGCACTGCCTCAGCATGGCCATCTCAT...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGATGAGATGGCCATGCTaGGGCAGTGCCAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPMRWPC*GSARAV
Trigger: CACGGCCCTGGCACTGCCTCAGCATGGCCATCTCAT...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGGCTCCCAGGAGAGCTTaGCTGGTCGTCCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGAPRRA*LVVLRD
Trigger: ATCTCTCAGGACGACCAGTCAAGCTCTCCTGGGAGC...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCTTCTCTGGCTTGGCTaGGTCCGGGTCCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGLLWLG*VRVQLG
Trigger: GCCAAGCTGGACCCGGACTCAGCCAAGCCAGAGAAG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGTGGAGCCAGCCCGTaGGGTCGTACCGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGCGASP*GRTAQG
Trigger: ACCCTGTGCGGTACGACCTCACGGGCTGGCTCCACA...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCGCCGGCGGAAGCGAGTaGGCCCCATGTGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFAGGSE*APCGQH
Trigger: ATGCTGACCACATGGGGCTCACTCGCTTCCGCCGGC...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGCCTCGGAGGTCGACATaGGCTTCTTCAGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGPRRST*ASSGVE
Trigger: CTCCACTCCTGAAGAAGCTCATGTCGACCTCCGAGG...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCGCTTCTGGCAGGACTaGCGGACATCCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRRFWQD*RTSSSS
Trigger: GGAACTGGAGGATGTCCGTCAGTCCTGCCAGAAGCG...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGCGGCTGCTGGTGGCTaGCTGTCGAGAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPAAAGG*LSRRSP
Trigger: AGGACTCCTTCTCGACAGTCAGCCACCAGCAGCCGC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR TCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGCTCCGAGAGGGCCGCTaGAGGACTGGGCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPLREGR*RTGQLF
Trigger: GAAAAGCTGCCCAGTCCTTCAGCGGCCCTCTCGGAG...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCATGCTCTGGCCTCCTTTaGCCTCCTCCTGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPCSGLL*PPPAGL
Trigger: CAGCCCCGCAGGAGGAGGGCAAAGGAGGCCAGAGCA...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACAGCAGCGCCCAGTATaGCCGCTGTGCCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPQQRPV*PLCHGA
Trigger: GGCTCCATGGCACAGCGGGCATACTGGGCGCTGCTG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTTTCCCCTTCCGGCTaGCGTGCCACGCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPLSPSG*RATRLF
Trigger: GAAGAGCCGCGTGGCACGGCAGCCGGAAGGGGAAAG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATGCTTCCGACCCACTTTaGAGGCCCCCGCCGCACCCA +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHASDPL*RPPPHP
Trigger: TGGGTGCGGCGGGGGCCTGCAAAGTGGGTCGGAAGC...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATTGGCCGCCCGGTCCTTaGCCTGGTGCCGGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHWPPGP*PGAGGS
Trigger: AGAACCCCCGGCACCAGGGCAAGGACCGGGCGGCCA...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCGCCCGGTCCTTaGCCTGGTGCCGGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLWPPGP*PGAGGS
Trigger: AGAACCCCCGGCACCAGGGCAAGGACCGGGCGGCCA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACACCATGCGGCTCCTCTaGAGGGCCTGCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHTMRLL*RACWEV
Trigger: CACCTCCCAGCAGGCCCTGCAGAGGAGCCGCATGGT...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCAGATGACCGCCTCCTaGCTGCTGACGATGGCTCGA +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRQMTAS*LLTMAR
Trigger: TCGAGCCATCGTCAGCAGGCAGGAGGCGGTCATCTG...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTGGCTGCTCTCCCGCTaGTGGGACTCGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIWLLSR*WDSEVA
Trigger: GGCCACCTCCGAGTCCCAGCAGCGGGAGAGCAGCCA...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGCATCCCCGCAGGATATaGCTCTGTGGGCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGHPRRI*LCGLIS
Trigger: CGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTAGACGTCTCCCCGGGTaGCCGCGAAGGGACCCCACC +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSRRLPG*PRRDPT
Trigger: GGTGGGGTCCCTTCGCGGCCACCCGGGGAGACGTCT...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTTCTCCAGAGCAGGCTaGCTGGGTCCTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGFSRAG*LGPSSS
Trigger: AGAGCTGGAAGGACCCAGCCAGCCTGCTCTGGAGAA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTCTCACCCTTCCTGCTaGCAGGTCTGCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGSHPSC*QVCCSL
Trigger: GAGGGAACAGCAGACCTGCCAGCAGGAAGGGTGAGA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGCCAGGTCCTCGACCTaGTCCAGCTCAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPARSST*SSSGGL
Trigger: CAACCCTCCTGAGCTGGACCAGGTCGAGGACCTGGC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGGAGGGCCCCCGGGGCTaGAGGACAATCAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGEEGPRG*RTIRSG
Trigger: GCCTGATCTGATTGTCCTCCAGCCCCGGGGGCCCTC...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCGCCATGGAGCCAATGTaGGCAGGCAGGCCATCCCGG +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLAMEPM*AGRPSR
Trigger: CCGGGATGGCCTGCCTGCCCACATTGGCTCCATGGC...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGCTCTGGTCTCTCCGCTaGTTCAGCAGCGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGLWSLR*FSSAQY
Trigger: ATACTGGGCGCTGCTGAACCAGCGGAGAGACCAGAG...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCGTGGCACTGCGGCTGTaGGCCATGGACACAGAGCCG +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFVALRL*AMDTEP
Trigger: CGGCTCTGTGTCCATGGCCCACAGCCGCAGTGCCAC...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACCGAGAGGTTGGGCTTaGCTCTGTGGAGCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSPRGWA*LCGASP
Trigger: CGGGCTGGCTCCACAGAGCCAAGCCCAACCTCTCGG...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCCAGGGCCGAGAGGTTaGGCTTGGCTCTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAPGPRG*AWLCGA
Trigger: GGCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGG...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGACTCACCTAGGGCCTaGGCCAGCTGCAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRDSPRA*ASCRSN
Trigger: GTTTGACCTGCAGCTGGCCCAGGCCCTAGGTGAGTC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTCCTCTAGGCCCAGCGTaGACCCCTGGCCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAPLGPA*TPGLSG
Trigger: CCCAGAGAGGCCAGGGGTCCACGCTGGGCCTAGAGG...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCCTCTAGGCCCAGCGTaGACCCCTGGCCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIPLGPA*TPGLSG
Trigger: CCCAGAGAGGCCAGGGGTCCACGCTGGGCCTAGAGG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTCCGAGGACGCAGTGTaGGCGACAACAGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRSEDAV*ATTACP
Trigger: GGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGA...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGAGCGGGATCCTCCTTaGGCTCCGGGCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRERDPP*APGSSS
Trigger: TGAAGAAGAGCCCGGAGCCCAAGGAGGATCCCGCTC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCATTTCCTCCCCGTCCCTaGCTCTCTCCGCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPFPPRP*LSPLGG
Trigger: TCCCCCGAGCGGAGAGAGCCAGGGACGGGGAGGAAA...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTTTTCCTCCCCGTCCCTaGCTCTCTCCGCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAFPPRP*LSPLGG
Trigger: TCCCCCGAGCGGAGAGAGCCAGGGACGGGGAGGAAA...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCGCCACCGGGGAGGCCTaGCCAGTCTCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGATGEA*PVSLSP
Trigger: TGGAGACAGAGAGACTGGCCAGGCCTCCCCGGTGGC...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGCCACCGGGGAGGCCTaGCCAGTCTCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAATGEA*PVSLSP
Trigger: TGGAGACAGAGAGACTGGCCAGGCCTCCCCGGTGGC...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACTTCTCTGGCTTGGCTaGGTCCGGGTCCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSLLWLG*VRVQLG
Trigger: GCCAAGCTGGACCCGGACTCAGCCAAGCCAGAGAAG...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGCCAGCTCCTCCTTGCTaGCTGATGTCTTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGPAPPC*LMSCHP
Trigger: AGGATGGCAAGACATCAGTCAGCAAGGAGGAGCTGG...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCCGCCTCCTGCCTGCTaGCGATGGCTCGATCCACGG +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHPPPAC*RWLDPR
Trigger: CCGTGGATCGAGCCATCGTCAGCAGGCAGGAGGCGG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGCTCCTCCCCCATCTTaGTCAGGCTGTCCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSAPPPS*SGCPEA
Trigger: GGCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGC...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCGCTCCTCCCCCATCTTaGTCAGGCTGTCCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLAPPPS*SGCPEA
Trigger: GGCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGC...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGGAGGTGGCCGCCTGTaGAAGCTCCTCCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWGGGRL*KLLPHL
Trigger: AAGATGGGGGAGGAGCTTTCACAGGCGGCCACCTCC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCCTCTGGCTGGGAGCTaGGGATGGAGACGTTATCCA +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRPLAGS*GWRRYP
Trigger: TGGATAACGTCTCCATCCTCAGCTCCCAGCCAGAGG...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCGCGGCTGCTGGTGGCTaGCTGTCGAGAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLAAAGG*LSRRSP
Trigger: AGGACTCCTTCTCGACAGTCAGCCACCAGCAGCCGC...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR TCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCTCCGAGAGGGCCGCTaGAGGACTGGGCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHLREGR*RTGQLF
Trigger: GAAAAGCTGCCCAGTCCTTCAGCGGCCCTCTCGGAG...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR TCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCCTCCGAGAGGGCCGCTaGAGGACTGGGCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLLREGR*RTGQLF
Trigger: GAAAAGCTGCCCAGTCCTTCAGCGGCCCTCTCGGAG...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR TCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGATGGAGCCGGAGGATaGGGACGAGTCAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPDGAGG*GRVRQV
Trigger: CACCTGTCTGACTCGTCCTCATCCTCCGGCTCCATC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAGCTCATCTCGCCTCTTaGGGGTGGCCATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPAHLAS*GWPCWL
Trigger: CAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGC...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCGCTCATCTCGCCTCTTaGGGGTGGCCATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLAHLAS*GWPCWL
Trigger: CAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGC...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGCGCCATCACAGCTCCTaGACTGGTTCCTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGRHHSS*TGSYFW
Trigger: CCAGAAGTAGGAACCAGTTCAGGAGCTGTGATGGCG...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTTGATGCTTGTCATCTaGTCAGGGTCGGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRLMLVI*SGSGLR
Trigger: CCGCAGCCCCGACCCTGAGCAGATGACAAGCATCAA...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCTCCCCTGCCTGTCTTTaGCCTGGGGCTCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGSPACL*PGAQPL
Trigger: AAGAGGCTGAGCCCCAGGGCAAAGACAGGCAGGGGA...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCGCTTCCGACCCACTTTaGAGGCCCCCGCCGCACCCA +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLASDPL*RPPPHP
Trigger: TGGGTGCGGCGGGGGCCTGCAAAGTGGGTCGGAAGC...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCTCACACTGGAGGGGCTaGTCACAGGTCCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFSHWRG*SQVRRA
Trigger: TGCCCTGCGGACCTGTGAGCAGCCCCTCCAGTGTGA...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCGTGCAGGACCTGGGGTaGATCCAGGGCCGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGVQDLG*IQGREV
Trigger: AACCTCTCGGCCCTGGATGCACCCCAGGTCCTGCAC...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGTGCAGGACCTGGGGTaGATCCAGGGCCGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAVQDLG*IQGREV
Trigger: AACCTCTCGGCCCTGGATGCACCCCAGGTCCTGCAC...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTTGTCTCTACCAGGCTaGGGTGGTGGTGGAGATTCC +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGLSLPG*GGGGDS
Trigger: GGAATCTCCACCACCACCGCAGCCTGGTAGAGACAA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAGGCCAGAGGTCCACCTaGCCCAGGCTTGTCTCTACC +
Preference number: 4 (lower is better)
Translates to: VDRALLSANADWVLSVSPGQRST*PRLVST
Trigger: GGTAGAGACAAGCCTGGGGCAGGTGGACCTCTGGCC...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGAAAAACTTGGCTGTaGCCCACAGCCACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGRKTWL*PTATAF
Trigger: GAAGGCGGTGGCTGTGGGGCACAGCCAAGTTTTTCT...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCAGTCGAAGCGCATCTaGCACTCGTCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRQSKRI*HSSAPP
Trigger: TGGAGGAGCAGACGAGTGGCAGATGCGCTTCGACTG...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGGTGCCCAGAAGGAGCTaGACGTCTGACAACAGTGCA +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGVPRRS*TSDNSA
Trigger: TGCACTGTTGTCAGACGTGCAGCTCCTTCTGGGCAC...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTTCTCCAGCTCGCTGTaGATGCTCTCCAGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRFSSSL*MLSRSA
Trigger: AGCGGACCTGGAGAGCATGCACAGCGAGCTGGAGAA...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCACTTCTCCAGCTCCATaGACCGCCGGCTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGTSPAP*TAGWPL
Trigger: CAGAGGCCAGCCGGCGGTGCATGGAGCTGGAGAAGT...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCAGGGGGCGAGGATGGTaGAGGGCTCTTGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGRGRGW*RALVLF
Trigger: GAAGAGGACAAGAGCCCTCCACCATCCTCGCCCCCT...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGAGTCTTCTCTGGCTTaGCTGAGTCCGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRESSLA*LSPGPA
Trigger: AGCTGGACCCGGACTCAGCCAAGCCAGAGAAGACTC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTTGGGCTTGGGGCCTaGTCCCCTGCCTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPLGLGA*SPACLC
Trigger: GCAAAGACAGGCAGGGGACCAGGCCCCAAGCCCAAG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCGGGGCTGGCCCGTCTTaGTTCTCCTTCCGTATCCGA +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGGAGPS*FSFRIR
Trigger: TCGGATACGGAAGGAGAACCAAGACGGGCCAGCCCC...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCCTCCTCCTGCGGGGCTaGCCCGTCTTGGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLLLLRG*PVLVLL
Trigger: AAGGAGAACCAAGACGGGCCAGCCCCGCAGGAGGAG...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCTCCTCCTGCGGGGCTaGCCCGTCTTGGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHLLLRG*PVLVLL
Trigger: AAGGAGAACCAAGACGGGCCAGCCCCGCAGGAGGAG...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCACTCCTCCTGCGGGGCTaGCCCGTCTTGGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VDRALLSANADWVLSVSPLLLRG*PVLVLL
Trigger: AAGGAGAACCAAGACGGGCCAGCCCCGCAGGAGGAG...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCCATGGAGAACCGGGTaGCACTGCGGCTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGPWRTG*HCGCGP
Trigger: TGGCCCACAGCCGCAGTGCCACCCGGTTCTCCATGG...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCCATGGAGAACCGGGTaGCACTGCGGCTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIPWRTG*HCGCGP
Trigger: TGGCCCACAGCCGCAGTGCCACCCGGTTCTCCATGG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGCTGCTATCTGCCATCTaGTGCAGGTTCAGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGLLSAI*CRFSSV
Trigger: GACGGAGCTGAACCTGCACCAGATGGCAGATAGCAG...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCATGGCACCCTGGAGCTaGGCAAAGGCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIMAPWS*AKAAAA
Trigger: GGCGGCAGCTGCCTTTGCCCAGCTCCAGGGTGCCAT...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATCCACAACAGCCACGGTaGTCCCTGGGGAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHPQQPR*SLGRGP
Trigger: CGGACCCCTCCCCAGGGACCACCGTGGCTGTTGTGG...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGGCCTCTGGCATCCTaGGCACCTCCTCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLRPLAS*APPPAG
Trigger: ACCAGCTGGAGGAGGTGCCCAGGATGCCAGAGGCCT...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTGGGCTTGGCTCTGTaGAGCCAGCCCGTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSLGLAL*SQPVRS
Trigger: CGACCTCACGGGCTGGCTCCACAGAGCCAAGCCCAA...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCCGAGAGGTTGGGCTTaGCTCTGTGGAGCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIPRGWA*LCGASP
Trigger: CGGGCTGGCTCCACAGAGCCAAGCCCAACCTCTCGG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGACTGGTGCAGGACCTaGGGTGCATCCAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLDWCRT*GASRAE
Trigger: CTCGGCCCTGGATGCACCCCAGGTCCTGCACCAGTC...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGACACAGGAGGCAGCTTaGCCCGGGCCTGGAATAGAC +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPTQEAA*PGPGID
Trigger: GTCTATTCCAGGCCCGGGCCAAGCTGCCTCCTGTGT...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CCCTGGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGTTTGGTACCAGGCAGTaGATAAAGTGCAGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PWLSPLGGRSLATVTRKSFGTRQ*IKCSRD
Trigger: GTCCCGGCTGCACTTTATCCACTGCCTGGTACCAAA...CGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGTCTACCAGGCTGCGGTaGTGGTGGAGATTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPSTRLR*WWRFLP
Trigger: GGGCAGGAATCTCCACCACCACCGCAGCCTGGTAGA...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGGAGCGTCCAGCACCTaGAATTGCCGGCGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWGASST*NCRRKR
Trigger: TCGCTTCCGCCGGCAATTCCAGGTGCTGGACGCTCC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAGGAGCGTCCAGCACCTaGAATTGCCGGCGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: VDRALLSANADWVLSVSPGASST*NCRRKR
Trigger: TCGCTTCCGCCGGCAATTCCAGGTGCTGGACGCTCC...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGGTTGCTCAAGGGCGCTaGATTCCAACTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGVAQGR*IPTSRA
Trigger: GGCTCTGGAAGTTGGAATCCAGCGCCCTTGAGCAAC...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTCTTGCCATCCTCCATaGTGCCCAGAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGSCHPP*CPEGAA
Trigger: TGCAGCTCCTTCTGGGCACCATGGAGGATGGCAAGA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACGCTGGGACTCGGAGGTaGCCGCCTGTGAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHAGTRR*PPVKAP
Trigger: AGGAGCTTTCACAGGCGGCCACCTCCGAGTCCCAGC...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTCTTGCTGTGGACATTaGTGGACCGGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGSCCGH*WTGLCS
Trigger: TGAGCAGAGCCCGGTCCACCAATGTCCACAGCAAGA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTCCCCATGCTCGGTCTaGATTCTAAGAGGGACTCGC +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGSPCSV*ILRGTR
Trigger: GCGAGTCCCTCTTAGAATCCAGACCGAGCATGGGGA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGGCATGTCCCTGGGTGTaGTCGGAGAGCTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGACPWV*SESSVF
Trigger: GAAAACTGAGCTCTCCGACCACACCCAGGGACATGC...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGGTTCCTCCATCAGGTaGGCAAACTGGCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRGSSIR*ANWRFW
Trigger: CCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGTTTCCTCCCCGTCCCTaGCTCTCTCCGCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLFPPRP*LSPLGG
Trigger: TCCCCCGAGCGGAGAGAGCCAGGGACGGGGAGGAAA...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTTTCCTCCCCGTCCCTaGCTCTCTCCGCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIFPPRP*LSPLGG
Trigger: TCCCCCGAGCGGAGAGAGCCAGGGACGGGGAGGAAA...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGCCACCGGGGAGGCCTaGCCAGTCTCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLEATGEA*PVSLSP
Trigger: TGGAGACAGAGAGACTGGCCAGGCCTCCCCGGTGGC...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTCAGGCCAACCACACTaGGAGCCCAGCATCCCCGCA +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLSGQPH*EPSIPA
Trigger: TGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTCAGGCCAACCACACTaGGAGCCCAGCATCCCCGCA +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWSGQPH*EPSIPA
Trigger: TGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTCAGGCCAACCACACTaGGAGCCCAGCATCCCCGCA +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLSGQPH*EPSIPA
Trigger: TGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
3UTR CAA 72 bp TCGGAGGTGGCCGCCTGTGAAAGCTCCTCCCCCATCTaGATCAGGCTGTCCCGAAGCCGGATCACCAGGACC +
Preference number: 4 (lower is better)
Translates to: SEVAACESSSPI*IRLSRSRITRT
Trigger: GGTCCTGGTGATCCGGCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGCTTTCACAGGCGGCCACCTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCGCTGCTCGCTCTCTaGGATGCCGAGCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWPLLAL*DAEHLH
Trigger: ATGGAGATGCTCGGCATCTCAGAGAGCGAGCAGCGG...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCCACTCCTGTCATCTTaGGCCCTGAGCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRPLLSS*ALSWFP
Trigger: AGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGG...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGGGATCTGTTGATGAGTaGGACCACAGCCGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGGSVDE*DHSRKE
Trigger: CTCTTTGCGGCTGTGGTCTCACTCATCAACAGATCC...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGAGAGTCCACCACCATaGTGGAGGCCATGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRESPPP*WRPWRD
Trigger: ATCTCTCCATGGCCTCCATCATGGTGGTGGACTCTC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAGCTCCTCTCTTTTTaGCTGGTGCAGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGQLLSF*LVQDLG
Trigger: CCCCAGGTCCTGCACCAGTCAAAAAGAGAGGAGCTG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGCATCCATCTGCAGCTTaGTCTGGGAGCACGGGGCTT +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPHPSAA*SGSTGL
Trigger: AAGCCCCGTGCTCCCAGATCAAGCTGCAGATGGATG...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGAGGCCACATCACCTTTaGAGCGCTCATCGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRRPHHL*SAHRQG
Trigger: ACCTTGCCGATGAGCGCTTCAAAGGTGATGTGGCCT...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGTTCATGCTTGCTCTTaGGCTCCTGGACCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPVHACS*APGPPG
Trigger: TCCGGGAGGTCCAGGAGCTCAAGAGCAAGCATGAAC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACGCTTCTGGCAGGACTaGCGGACATCCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPRFWQD*RTSSSS
Trigger: GGAACTGGAGGATGTCCGTCAGTCCTGCCAGAAGCG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCGTGCATGTGTCCTCCTaGGGTCTCTCCGAAGTCGCT +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGVHVSS*GLSEVA
Trigger: AGCGACTTCGGAGAGACCTCAGGAGGACACATGCAC...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCGTTTATCCTGGGGCTaGGGATGCGGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGRLSWG*GCGCWW
Trigger: CCACCAGCAGCCGCATCCTCAGCCCCAGGATAAACG...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR TCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGGACGAGTCAGACAGGTaGGCGGGATCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGDESDR*AGSSLG
Trigger: GCCCAAGGAGGATCCCGCTCACCTGTCTGACTCGTC...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGCTCATCTCGCCTCTTaGGGGTGGCCATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGAHLAS*GWPCWL
Trigger: CAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGCCATGCTGAGGCAGTaGCAGGGCCGTGAGATGATG +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWAMLRQ*QGREMM
Trigger: CATCATCTCACGGCCCTGGCACTGCCTCAGCATGGC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCTCTTCCCGAATCTTCTaGTCCCACAGGGCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGSSRIF*SHRARR
Trigger: ACGCCTCGCCCTGTGGGAGCAGAAGATTCGGGAAGA...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCTTGATGCTTGTCATCTaGTCAGGGTCGGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGLMLVI*SGSGLR
Trigger: CCGCAGCCCCGACCCTGAGCAGATGACAAGCATCAA...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGGGCCAAGATCTCGGTaGTGGCCTGGGAGCCACAAG +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLGPRSR*WPGSHK
Trigger: CTTGTGGCTCCCAGGCCAGCACCGAGATCTTGGCCC...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGCCCCTTCCCCACTATaGTTTGACCCTCCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPAPSPL*FDPPRL
Trigger: AAGGCGAGGAGGGTCAAAGCATAGTGGGGAAGGGGC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTGCTCCCTCCTTCTCTaGTTTCCCTGGTCGCACCCC +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLCSLLL*FPWSHP
Trigger: GGGGTGCGACCAGGGAAAGCAGAGAAGGAGGGAGCA...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCATCCCAGGACTCACCTaGCTTCCCAGTCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLIPGLT*LPSRAP
Trigger: CGGAGCACGACTGGGAAGGCAGGTGAGTCCTGGGAT...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAATCCCAGGACTCACCTaGCTTCCCAGTCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSIPGLT*LPSRAP
Trigger: CGGAGCACGACTGGGAAGGCAGGTGAGTCCTGGGAT...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTGCTCTGGCCTCCTTTaGCCTCCTCCTGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMCSGLL*PPPAGL
Trigger: CAGCCCCGCAGGAGGAGGGCAAAGGAGGCCAGAGCA...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATTGCTCTGGCCTCCTTTaGCCTCCTCCTGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHCSGLL*PPPAGL
Trigger: CAGCCCCGCAGGAGGAGGGCAAAGGAGGCCAGAGCA...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCCCAGTATGCCCGCTGTaGCATGGAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGPVCPL*HGANVG
Trigger: GCCCACATTGGCTCCATGGCACAGCGGGCATACTGG...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCCCAGTATGCCCGCTGTaGCATGGAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLPVCPL*HGANVG
Trigger: GCCCACATTGGCTCCATGGCACAGCGGGCATACTGG...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGCCATCCACACTGCCTaGCATCCCCACCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAAIHTA*HPHQVF
Trigger: GAACACCTGGTGGGGATGGCAGGCAGTGTGGATGGC...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTAGAACCGGGTGGCACTaGGGCTGTGGGCCATGGACA +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHARTGWH*GCGPWT
Trigger: TGTCCATGGCCCACAGCCGCAGTGCCACCCGGTTCT...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCGCCAAACAGCCCGCTaGTCGCTCTCTGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHRQTAR*SLSEMP
Trigger: CGGCATCTCAGAGAGCGAGCAGCGGGCTGTTTGGCG...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTACCATGCGGCTCCTCTaGAGGGCCTGCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSTMRLL*RACWEV
Trigger: CACCTCCCAGCAGGCCCTGCAGAGGAGCCGCATGGT...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCATCACCGCGGCAAGGCTaGTGGCAAAGGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPSPRQG*WQRSSS
Trigger: TGAGGAGGACCTTTGCCAGCAGCCTTGCCGCGGTGA...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATGGCCAGAGGTCCACCTaGCCCAGGCTTGTCTCTACC +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHGQRST*PRLVST
Trigger: GGTAGAGACAAGCCTGGGGCAGGTGGACCTCTGGCC...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCAAGCTGGACCCTCAGTaGTGGGATATCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGKLDPQ*WDIQGQ
Trigger: CTGGCCCTGGATATCCCAGCACTGAGGGTCCAGCTT...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTCCAGCACCTGGAATTaGCGGCGGAAGCGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHSSTWN*RRKRVS
Trigger: GCTCACTCGCTTCCGCCGGCAATTCCAGGTGCTGGA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCTGGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGAACTCCCCAAGCTTTTaGTCCAGCTCTTTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PWLSPLGGRSLATVTRKSNSPSF*SSSFLA
Trigger: AGCCAGGAAAGAGCTGGAGCAAAAGCTTGGGGAGTT...CGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGAACCGCTGGCGGAGCTaGTCCAGCTGCTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWNRWRS*SSCLMV
Trigger: CACCATCAAGCAGCTGGAGCAGCTCCGCCAGCGGTT...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCTGGTCCTCATCGATaGGCTTCAGGAGGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWPGPHR*ASGGPP
Trigger: AGGCGGACCTCCTGAAGCGCATCGATGAGGACCAGG...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACAGATGACCGCCTCCTaGCTGCTGACGATGGCTCGA +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPQMTAS*LLTMAR
Trigger: TCGAGCCATCGTCAGCAGGCAGGAGGCGGTCATCTG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGCTGGTAGTACTGGCTaGTCTCCCGCTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWAGSTG*SPAAGT
Trigger: AGTCCCAGCAGCGGGAGAGCAGCCAGTACTACCAGC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATCCGCCGGCTGGCCTCTaGCTCCCGCTGCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDPPAGL*LPLHQL
Trigger: GAGCTGGTGCAGCGGGAGGCAGAGGCCAGCCGGCGG...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGACTTCTCCAGCTCCATaGACCGCCGGCTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLTSPAP*TAGWPL
Trigger: CAGAGGCCAGCCGGCGGTGCATGGAGCTGGAGAAGT...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCAACTTCTCCAGCTCCATaGACCGCCGGCTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: EDAVWATTACPWVWSESSTSPAP*TAGWPL
Trigger: CAGAGGCCAGCCGGCGGTGCATGGAGCTGGAGAAGT...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTCTTCCAAGGCAGCCTaGAGGTCGGCAATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLSSKAA*RSAIRR
Trigger: TCGGCGGATTGCCGACCTGCAGGCTGCCTTGGAAGA...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGCTGCCACAATCCACTaGCGTCTGGACACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRAATIH*RLDTLS
Trigger: ACTGAGAGTGTCCAGACGGCAGTGGATTGTGGCAGC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCAGCTCAACCAGGACTaGAGGCTGCCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGQLNQD*RLPSGW
Trigger: CCAGCCAGAGGGCAGCCTGCAGTCCTGGTTGAGCTG...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCCGGGCTCTGCTCAGTaGCAATGCCGACTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGPGSAQ*QCRLGP
Trigger: AGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGG...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCGCTGTGAACCGTCTTaGCCACCTTTGGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRRCEPS*PPLADP
Trigger: TGGATCAGCCAAAGGTGGGCAAGACGGTTCACAGCG...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCAGGGGGCGAGGATGGTaGAGGGCTCTTGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLRGRGW*RALVLF
Trigger: GAAGAGGACAAGAGCCCTCCACCATCCTCGCCCCCT...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGAGTCTTCTCTGGCTTaGCTGAGTCCGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPESSLA*LSPGPA
Trigger: AGCTGGACCCGGACTCAGCCAAGCCAGAGAAGACTC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCGAGTCTTCTCTGGCTTaGCTGAGTCCGGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGESSLA*LSPGPA
Trigger: AGCTGGACCCGGACTCAGCCAAGCCAGAGAAGACTC...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAAGATCTCGGTGCTaGCCTGGGAGCCACAAGGAG +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWPRSRC*PGSHKE
Trigger: CTCCTTGTGGCTCCCAGGCCAGCACCGAGATCTTGG...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCCAAGATCTCGGTGCTaGCCTGGGAGCCACAAGGAG +
Preference number: 4 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGEPRSRC*PGSHKE
Trigger: CTCCTTGTGGCTCCCAGGCCAGCACCGAGATCTTGG...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCCACAGTTCCTTGGCCTaGGTCCCCAAGACCCCCAGT +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLHSSLA*VPKTPS
Trigger: ACTGGGGGTCTTGGGGACCCAGGCCAAGGAACTGTG...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACACAGTTCCTTGGCCTaGGTCCCCAAGACCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPHSSLA*VPKTPS
Trigger: ACTGGGGGTCTTGGGGACCCAGGCCAAGGAACTGTG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCCTCTTTCAGCTCTGTaGTCTTGGGGGTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGPLSAL*SWGSQA
Trigger: GGCTTGGGACCCCCAAGACCACAGAGCTGAAAGAGG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCTTCTCTGCTTTCCCTaGTCGCACCCCCTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLLLCFP*SHPLAG
Trigger: CCCGGCGAGGGGGTGCGACCAGGGAAAGCAGAGAAG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTTTCTCCCAGGGATTTaGGGCCTTACGTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGFLPGI*GLTCFP
Trigger: AGGGAAGCACGTAAGGCCCCAAATCCCTGGGAGAAA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTGTGCTCACCTCCTTTaGGGCTTCACAGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRCAHLL*GFTALL
Trigger: GAGAAGGGCTGTGAAGCCCCAAAGGAGGTGAGCACA...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGCTTCCCAGGAGCTGCTaGCGACTCCACCATTGTGCT +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPLPRSC*RLHHCA
Trigger: AGCACAATGGTGGAGTCGCCAGCAGCTCCTGGGAAG...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCTGTCCTCAGGAGCCTaGTCTGAGTCTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGLSSGA*SESLLW
Trigger: CCAGAGCAGAGACTCAGACCAGGCTCCTGAGGACAG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGTCTCACCCTTCCTGCTaGCAGGTCTGCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPSHPSC*QVCCSL
Trigger: GAGGGAACAGCAGACCTGCCAGCAGGAAGGGTGAGA...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCATCCCGGCGGCCCTTaGGCACCTTCCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLHPGGP*APSLQK
Trigger: CTTCTGCAGGGAAGGTGCCCAAGGGCCGCCGGGATG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGATGCCCGCTGTGCCATaGAGCCAATGTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWMPAVP*SQCGQA
Trigger: TGCCTGCCCACATTGGCTCCATGGCACAGCGGGCAT...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCTCTGGTCTCTCCGCTaGTTCAGCAGCGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGLWSLR*FSSAQY
Trigger: ATACTGGGCGCTGCTGAACCAGCGGAGAGACCAGAG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCAGGGCCACAATGCTCTaGTCTCTCCGCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGRATML*SLRWFS
Trigger: GCTGAACCAGCGGAGAGACCAGAGCATTGTGGCCCT...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCCAGCGACATCACCATaGAGAACCGGGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAPATSP*RTGWHC
Trigger: GCAGTGCCACCCGGTTCTCCATGGTGATGTCGCTGG...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAGCGACATCACCATaGAGAACCGGGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWPATSP*RTGWHC
Trigger: GCAGTGCCACCCGGTTCTCCATGGTGATGTCGCTGG...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCCACCCAGGTGGTAGATaGCTGCCAGGACCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLHPGGR*LPGPAK
Trigger: TTTGGCGGGTCCTGGCAGCCATCTACCACCTGGGTG...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCATGGTGCCGGGGGTTCTaGAAGCCTGGAGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: EDAVWATTACPWVWSESSWCRGF*KPGEST
Trigger: GGTGGACTCTCCAGGCTTCCAGAACCCCCGGCACCA...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGACAGCTCCTCAAAGGTaGCCGCCCGGTCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGTAPQR*PPGPCP
Trigger: AGGGCAAGGACCGGGCGGCCACCTTTGAGGAGCTGT...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGCCACAACAGCCACGGTaGTCCCTGGGGAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLPQQPR*SLGRGP
Trigger: CGGACCCCTCCCCAGGGACCACCGTGGCTGTTGTGG...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTTGGGCTTGGCTCTGTaGAGCCAGCCCGTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHLGLAL*SQPVRS
Trigger: CGACCTCACGGGCTGGCTCCACAGAGCCAAGCCCAA...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCCAGGGCCGAGAGGTTaGGCTTGGCTCTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMPGPRG*AWLCGA
Trigger: GGCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGG...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCAGCTTGGCCCGGGCCTaGAATAGACTCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLISLARA*NRLRSS
Trigger: GGAGCTGCGGAGTCTATTCCAGGCCCGGGCCAAGCT...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCCGCGGCAAGGCTGCTaGCAAAGGTCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIPRQGC*QRSSSP
Trigger: TGGTGAGGAGGACCTTTGCCAGCAGCCTTGCCGCGG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACCAGGCTGCGGTGGTaGTGGAGATTCCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLTRLRW*WRFLPT
Trigger: AGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGT...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCAGAGCCTCCAGGATGTaGAACCCAGCAAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGRASRM*NPASWT
Trigger: GGTCCAGCTTGCTGGGTTCCACATCCTGGAGGCTCT...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGGAGCGTCCAGCACCTaGAATTGCCGGCGGAAGCGA +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGGASST*NCRRKR
Trigger: TCGCTTCCGCCGGCAATTCCAGGTGCTGGACGCTCC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCGCTCCAGCTCTTTCCTaGCTGTCAGCTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGAPALS*LSAPSP
Trigger: TGGACTCGGAGCTGACAGCCAGGAAAGAGCTGGAGC...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTTCCAGCTCAAACCGCTaGCGGAGCTGCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHASSSNR*RSCSSC
Trigger: GCAGCTGGAGCAGCTCCGCCAGCGGTTTGAGCTGGA...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCATCCAGCTCAAACCGCTaGCGGAGCTGCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EDAVWATTACPWVWSESSSSSNR*RSCSSC
Trigger: GCAGCTGGAGCAGCTCCGCCAGCGGTTTGAGCTGGA...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGAGGCCTCCTCACACTTaGCTTCACTCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRRPPHT*LHSAPA
Trigger: AGCTGGAGCAGAGTGAAGCCAAGTGTGAGGAGGCCT...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCGGATGCGGCTGCTGGTaGCTGACTGTCGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLGCGCW*LTVEKE
Trigger: CTCCTTCTCGACAGTCAGCCACCAGCAGCCGCATCC...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACGGATGCGGCTGCTGGTaGCTGACTGTCGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHGCGCW*LTVEKE
Trigger: CTCCTTCTCGACAGTCAGCCACCAGCAGCCGCATCC...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCTGCTGTGGACATTGGTaGACCGGGCTCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGCCGHW*TGLCSV
Trigger: CACTGAGCAGAGCCCGGTCCACCAATGTCCACAGCA...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCCCAGCGTGGACCCCTaGCCTCTCTGGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLPSVDP*PLWALF
Trigger: GAAGAGAGCCCAGAGAGGCCAGGGGTCCACGCTGGG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCGGTAAATGGGGAGAGTaGGCCAGTCCTCTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGGKWGE*ASPLGP
Trigger: TGGGCCTAGAGGACTGGCCCACTCTCCCCATTTACC...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTCCGAGGACGCAGTGTaGGCGACAACAGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWSEDAV*ATTACP
Trigger: GGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGA...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCCGAGGACGCAGTGTaGGCGACAACAGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGSEDAV*ATTACP
Trigger: GGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGA...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGCTCCTTTCCAAGGTCTaGACAGCCCGCATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPLLSKV*TARIVH
Trigger: GTGGACGATGCGGGCTGTCCAGACCTTGGAAAGGAG...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCGTCTTGCCCACCTTTaGCTGATCCAGCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGRLAHL*LIQPRR
Trigger: CCTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATTTTCCTCCCCGTCCCTaGCTCTCTCCGCTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHFPPRP*LSPLGG
Trigger: TCCCCCGAGCGGAGAGAGCCAGGGACGGGGAGGAAA...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCGCCACCGGGGAGGCCTaGCCAGTCTCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGATGEA*PVSLSP
Trigger: TGGAGACAGAGAGACTGGCCAGGCCTCCCCGGTGGC...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGGCAGTGCCAGGGCCGTaGGATGATGAGATGAGATGG +
Preference number: 4 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGEAVPGP*DDEMRW
Trigger: CCATCTCATCTCATCATCTCACGGCCCTGGCACTGC...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGCTCCCAGGAGAGCTTaGCTGGTCGTCCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAAPRRA*LVVLRD
Trigger: ATCTCTCAGGACGACCAGTCAAGCTCTCCTGGGAGC...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCCTTCTCTGGCTTGGCTaGGTCCGGGTCCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGLLWLG*VRVQLG
Trigger: GCCAAGCTGGACCCGGACTCAGCCAAGCCAGAGAAG...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCAGGCCCGGAGGACAGTaGAGGTGGCTCGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGRPGGQ*RWLGSS
Trigger: AGAAGATCCGAGCCACCTTCACTGTCCTCCGGGCCT...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCAGCATTGTCTGGAGCTaGGCAGCTGTGATGCGGCCT +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLSIVWS*AAVMRP
Trigger: AGGCCGCATCACAGCTGCTCAGCTCCAGACAATGCT...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGTCGAAGGTGGTGCTTaGAGGTGGCCGTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSVEGGA*RWPCSA
Trigger: AGCTGAACACGGCCACCTTCAAGCACCACCTTCGAC...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGTCGAAGGTGGTGCTTaGAGGTGGCCGTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWVEGGA*RWPCSA
Trigger: AGCTGAACACGGCCACCTTCAAGCACCACCTTCGAC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCCAGCTCCTCTCTTTTTaGCTGGTGCAGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLQLLSF*LVQDLG
Trigger: CCCCAGGTCCTGCACCAGTCAAAAAGAGAGGAGCTG...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAACCATGGCCAGTCCTTaGCTGCGAGGAACACAGCCA +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSTMASP*LRGTQP
Trigger: TGGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGT...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGTTCATGCTTGCTCTTaGGCTCCTGGACCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWVHACS*APGPPG
Trigger: TCCGGGAGGTCCAGGAGCTCAAGAGCAAGCATGAAC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGTTCATGCTTGCTCTTaGGCTCCTGGACCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSVHACS*APGPPG
Trigger: TCCGGGAGGTCCAGGAGCTCAAGAGCAAGCATGAAC...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACGCTGCTCCAGCTGCTTaGTGGTGTTTTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHAAPAA*WCFPAG
Trigger: GCCAGCAGGAAAACACCATCAAGCAGCTGGAGCAGC...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAGTGCATGTGTCCTCCTaGGGTCTCTCCGAAGTCGCT +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPVHVSS*GLSEVA
Trigger: AGCGACTTCGGAGAGACCTCAGGAGGACACATGCAC...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTCCAGGTCCGCTGTaGGCACCTTCTGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGSPGPL*APSASS
Trigger: TGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGA...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGAGGTGGCCGCCTGTaGAAGCTCCTCCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSGGGRL*KLLPHL
Trigger: AAGATGGGGGAGGAGCTTTCACAGGCGGCCACCTCC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTGCCCACCTTTGGCTaGTCCAGCCAAGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSLPTFG*SSQGGR
Trigger: CCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCAA...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGGACGAGTCAGACAGGTaGGCGGGATCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMDESDR*AGSSLG
Trigger: GCCCAAGGAGGATCCCGCTCACCTGTCTGACTCGTC...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGATGGAGCCGGAGGATaGGGACGAGTCAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGDGAGG*GRVRQV
Trigger: CACCTGTCTGACTCGTCCTCATCCTCCGGCTCCATC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCTGCTGTCAGCACTTTTaGAGGACACGATGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGCCQHF*RTRWSR
Trigger: CCGGCTCCATCGTGTCCTTCAAAAGTGCTGACAGCA...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCCTCTGGCTGGGAGCTaGGGATGGAGACGTTATCCC +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGPLAGS*GWRRYP
Trigger: GGGATAACGTCTCCATCCTCAGCTCCCAGCCAGAGG...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543971.1
CDS-3UTR GCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGCCATGCTGAGGCAGTaGCAGGGCCGTGAGATGATG +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLEAMLRQ*QGREMM
Trigger: CATCATCTCACGGCCCTGGCACTGCCTCAGCATGGC...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGCTTCCAGATCTGGTaGCACTGCTGGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPGFQIW*HCWTCC
Trigger: ACAGCAAGTCCAGCAGTGGCACCAGATCTGGAAGCC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAACCCCTCGCTCTCCTTaGCCAGAATGTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VDRALLSANADWVLSVSPTPRSP*PECLSS
Trigger: GGAGCTCAGACATTCTGGGCAAGGAGAGCGAGGGGT...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGCCAAGATCTCGGTaGTGGCCTGGGAGCCACAAG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSGPRSR*WPGSHK
Trigger: CTTGTGGCTCCCAGGCCAGCACCGAGATCTTGGCCC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGCTCCGAAGCTCACCTaGTTTCTCCCCCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPAPKLT*FLPHSQ
Trigger: CTGAGAATGGGGGAGAAAGCAGGTGAGCTTCGGAGC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCCTGCCTTCCCAGTCGTaGTCCGAAGCTCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLLPSQS*SEAHLL
Trigger: AAGCAGGTGAGCTTCGGAGCACGACTGGGAAGGCAG...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGCTTTCCCCTTCCGGCTaGCGTGCCACGCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLLSPSG*RATRLF
Trigger: GAAGAGCCGCGTGGCACGGCAGCCGGAAGGGGAAAG...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAAAGGAGCTGCTATCTaGCATCTGGTGCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGKGAAI*HLVQVQ
Trigger: CTGAACCTGCACCAGATGGCAGATAGCAGCTCCTTT...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTCAGGTGGTAGATGGCTaGCAGGACCCGCCAAACAGC +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAQVVDG*QDPPNS
Trigger: GCTGTTTGGCGGGTCCTGGCAGCCATCTACCACCTG...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCGCCCAGGGCCTCAGCTaGGTAGTTTGCCCACTCAAA +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGAQGLS*VVCPLK
Trigger: TTTGAGTGGGCAAACTACGCAGCTGAGGCCCTGGGC...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAGGTGGTGGAGATTCCTaGCCACTCCTGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPGGGDS*PLLLST
Trigger: GGTGGAAAGCAGGAGTGGGCAGGAATCTCCACCACC...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGTCCAGCACCTGGAATTaGCGGCGGAAGCGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLESSTWN*RRKRVS
Trigger: GCTCACTCGCTTCCGCCGGCAATTCCAGGTGCTGGA...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCTTCTGGATGCACTGTaGAGCCAGTCGGCGAATCTT +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRLLDAL*SQSANL
Trigger: AAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAG...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGTCCTTGGCTCGGAGCTaGTCAGTTCCAATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPSLARS*SVPMVA
Trigger: TGCCACCATTGGAACTGAGCAGCTCCGAGCCAAGGA...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTAACCGCTGGCGGAGCTaGTCCAGCTGCTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHANRWRS*SSCLMV
Trigger: CACCATCAAGCAGCTGGAGCAGCTCCGCCAGCGGTT...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTTGGCTTCACTCTaGTCCAGCTGGCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGHLASL*SSWLCT
Trigger: AGTGCACAGCCAGCTGGAGCAGAGTGAAGCCAAGTG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTTCTCCAGCTCGCTGTaGATGCTCTCCAGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLFSSSL*MLSRSA
Trigger: AGCGGACCTGGAGAGCATGCACAGCGAGCTGGAGAA...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCTGCAGCCTGTACAGCTaGTCATCCACCAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGCSLYS*SSTRLL
Trigger: CAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCA...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTTCTTCCAAGGCAGCCTaGAGGTCGGCAATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHASSKAA*RSAIRR
Trigger: TCGGCGGATTGCCGACCTGCAGGCTGCCTTGGAAGA...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCTTCCAAGGCAGCCTaGAGGTCGGCAATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLISSKAA*RSAIRR
Trigger: TCGGCGGATTGCCGACCTGCAGGCTGCCTTGGAAGA...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCTCTCTTTTCGGCCGCTaGTGCCACAATCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFSLFGR*CHNPLP
Trigger: CGGCAGTGGATTGTGGCAGCAGCGGCCGAAAAGAGA...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTTGGTGGACCGGGCTCTaGTCAGTGCCAATGCCGACT +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAWWTGL*SVPMPT
Trigger: AGTCGGCATTGGCACTGAGCAGAGCCCGGTCCACCA...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCGGGGAGTAGGGTTGTaGCCCCAACACCGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIRGVGL*PQHRLK
Trigger: CTTCAGACGGTGTTGGGGGCACAACCCTACTCCCCG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCATCCCCGCAGGATATaGCTCTGTGGGCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWHPRRI*LCGLIS
Trigger: CGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCGCTGGCTTCCAGATCTaGTGCCACTGCTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGAGFQI*CHCWTC
Trigger: GCAAGTCCAGCAGTGGCACCAGATCTGGAAGCCAGC...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGGTGCTGGCCTaGGAGCCACAAGGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLISVLA*EPQGVL
Trigger: TAGGACTCCTTGTGGCTCCCAGGCCAGCACCGAGAT...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCAAGATCTCGGTGCTaGCCTGGGAGCCACAAGGAG +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHPRSRC*PGSHKE
Trigger: CTCCTTGTGGCTCCCAGGCCAGCACCGAGATCTTGG...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCACAGTTCCTTGGCCTaGGTCCCCAAGACCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIHSSLA*VPKTPS
Trigger: ACTGGGGGTCTTGGGGACCCAGGCCAAGGAACTGTG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGCTTCTCTGCTTTCCCTaGTCGCACCCCCTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRLLCFP*SHPLAG
Trigger: CCCGGCGAGGGGGTGCGACCAGGGAAAGCAGAGAAG...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCCAGAGCAGGCTGGCTaGGTCCTTCCAGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIPEQAG*VLPALS
Trigger: AGACAGAGCTGGAAGGACCCAGCCAGCCTGCTCTGG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCATTCTCCAGAGCAGGCTaGCTGGGTCCTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPFSRAG*LGPSSS
Trigger: AGAGCTGGAAGGACCCAGCCAGCCTGCTCTGGAGAA...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGGGGCTGGCCCGTCTTaGTTCTCCTTCCGTATCCGA +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGGAGPS*FSFRIR
Trigger: TCGGATACGGAAGGAGAACCAAGACGGGCCAGCCCC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTGTCCTCAGGAGCCTaGTCTGAGTCTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGELSSGA*SESLLW
Trigger: CCAGAGCAGAGACTCAGACCAGGCTCCTGAGGACAG...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATGGAGGGTTGGCCCGATaGACATGCTCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHGGLAR*TCSSST
Trigger: GGTGGATGAGGAGCATGTCCATCGGGCCAACCCTCC...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGGAGGGTTGGCCCGATaGACATGCTCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLGGLAR*TCSSST
Trigger: GGTGGATGAGGAGCATGTCCATCGGGCCAACCCTCC...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCAGGAGGGTTGGCCCGATaGACATGCTCCTCATCCACC +
Preference number: 4 (lower is better)
Translates to: EDAVWATTACPWVWSESSGGLAR*TCSSST
Trigger: GGTGGATGAGGAGCATGTCCATCGGGCCAACCCTCC...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCCAGGTCCTCGACCTaGTCCAGCTCAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHARSST*SSSGGL
Trigger: CAACCCTCCTGAGCTGGACCAGGTCGAGGACCTGGC...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGGAGGGCCCCCGGGGCTaGAGGACAATCAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLEGPRG*RTIRSG
Trigger: GCCTGATCTGATTGTCCTCCAGCCCCGGGGGCCCTC...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGCATCCCGGCGGCCCTTaGGCACCTTCCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLHPGGP*APSLQK
Trigger: CTTCTGCAGGGAAGGTGCCCAAGGGCCGCCGGGATG...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGGGCCACAATGCTCTaGTCTCTCCGCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLRATML*SLRWFS
Trigger: GCTGAACCAGCGGAGAGACCAGAGCATTGTGGCCCT...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAGAGGCCCCATCGGCTTaGCCCAAACGTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPEAPSA*PKRHLL
Trigger: CAGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTC...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTGGTGCCGGGGGTTCTaGAAGCCTGGAGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSWCRGF*KPGEST
Trigger: GGTGGACTCTCCAGGCTTCCAGAACCCCCGGCACCA...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTGGTGCCGGGGGTTCTaGAAGCCTGGAGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMWCRGF*KPGEST
Trigger: GGTGGACTCTCCAGGCTTCCAGAACCCCCGGCACCA...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCGCCCGGTCCTTGCCCTaGTGCCGGGGGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKAARSLP*CRGFWK
Trigger: CTTCCAGAACCCCCGGCACCAGGGCAAGGACCGGGC...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGGCCCGGTCCTTGCCCTaGTGCCGGGGGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVARSLP*CRGFWK
Trigger: CTTCCAGAACCCCCGGCACCAGGGCAAGGACCGGGC...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGAGCCACGGTGGTCCCTaGGGAGGGGTCCGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSSHGGP*GGVREV
Trigger: GACCTCCCGGACCCCTCCCCAGGGACCACCGTGGCT...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATAGGCCTCTGGCATCCTaGGCACCTCCTCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHRPLAS*APPPAG
Trigger: ACCAGCTGGAGGAGGTGCCCAGGATGCCAGAGGCCT...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTTGGGCTTGGCTCTGTaGAGCCAGCCCGTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSLGLAL*SQPVRS
Trigger: CGACCTCACGGGCTGGCTCCACAGAGCCAAGCCCAA...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTAGCTTGGCCCGGGCCTaGAATAGACTCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSSLARA*NRLRSS
Trigger: GGAGCTGCGGAGTCTATTCCAGGCCCGGGCCAAGCT...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCCGCGGCAAGGCTGCTaGCAAAGGTCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSPRQGC*QRSSSP
Trigger: TGGTGAGGAGGACCTTTGCCAGCAGCCTTGCCGCGG...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGAGGCTGCGGTGGTGGTaGAGATTCCTGCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGRLRWW*RFLPTP
Trigger: AGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCT...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGGACCCTCAGTGCTaGGATATCCAGGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGLDPQC*DIQGQR
Trigger: CCTCTGGCCCTGGATATCCCAGCACTGAGGGTCCAG...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGAGAGCCTCCAGGATGTaGAACCCAGCAAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWRASRM*NPASWT
Trigger: GGTCCAGCTTGCTGGGTTCCACATCCTGGAGGCTCT...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCGCTCCAGCTCTTTCCTaGCTGTCAGCTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLAPALS*LSAPSP
Trigger: TGGACTCGGAGCTGACAGCCAGGAAAGAGCTGGAGC...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGACTCACCTAGGGCCTaGGCCAGCTGCAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLDSPRA*ASCRSN
Trigger: GTTTGACCTGCAGCTGGCCCAGGCCCTAGGTGAGTC...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGCTCCCACCGGACACTaGTGTTCTCCTGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWAPTGH*CSPGSL
Trigger: AAGTGACCCAGGAGAACACCAGTGTCCGGTGGGAGC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCGCTCCCACCGGACACTaGTGTTCTCCTGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGAPTGH*CSPGSL
Trigger: AAGTGACCCAGGAGAACACCAGTGTCCGGTGGGAGC...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTCCAGCTCAAACCGCTaGCGGAGCTGCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSSSSNR*RSCSSC
Trigger: GCAGCTGGAGCAGCTCCGCCAGCGGTTTGAGCTGGA...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAAGTGCCAATGCCGACTaGGTCCTCTCAGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSSANAD*VLSVSP
Trigger: TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACT...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATGCTGTGGACATTGGTaGACCGGGCTCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSCCGHW*TGLCSV
Trigger: CACTGAGCAGAGCCCGGTCCACCAATGTCCACAGCA...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCACCTGAGGTCTTGCTGTaGACATTGGTGGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: VDRALLSANADWVLSVSPPEVLL*TLVDRA
Trigger: AGCCCGGTCCACCAATGTCCACAGCAAGACCTCAGG...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGTGCCGGCGGACAAAGTaGGGAGAAACAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPCRRTK*GETGLS
Trigger: AGACAAGCCTGTTTCTCCCCACTTTGTCCGCCGGCA...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGGGCCGCTGAAGGACTaGGCAGCTTTTCCCTCGACA +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGGPLKD*AAFPST
Trigger: TGTCGAGGGAAAAGCTGCCCAGTCCTTCAGCGGCCC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGGTAAATGGGGAGAGTaGGCCAGTCCTCTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWGKWGE*ASPLGP
Trigger: TGGGCCTAGAGGACTGGCCCACTCTCCCCATTTACC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAGTCGTCTGGTAAATaGGGAGAGTGGGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGQSSGK*GEWASP
Trigger: AGGACTGGCCCACTCTCCCCATTTACCAGACGACTG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTCCTTTCCAAGGTCTaGACAGCCCGCATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWALLSKV*TARIVH
Trigger: GTGGACGATGCGGGCTGTCCAGACCTTGGAAAGGAG...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCCTCCTTTCCAAGGTCTaGACAGCCCGCATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFLLSKV*TARIVH
Trigger: GTGGACGATGCGGGCTGTCCAGACCTTGGAAAGGAG...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGATCAGGTGGGCAAACTaGCGGTTCTGGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGIRWAN*RFWKTS
Trigger: GCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGAT...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCGGTTCCTCCATCAGGTaGGCAAACTGGCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGGSSIR*ANWRFW
Trigger: CCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACC...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCAAGGAGGTAGGTGTCTaGGGCTTCCGGATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLKEVGV*GFRIAG
Trigger: CCCAGCTATCCGGAAGCCCCAGACACCTACCTCCTT...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACAAGGAGGTAGGTGTCTaGGGCTTCCGGATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHKEVGV*GFRIAG
Trigger: CCCAGCTATCCGGAAGCCCCAGACACCTACCTCCTT...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACGTCTTGCCCACCTTTaGCTGATCCAGCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSRLAHL*LIQPRR
Trigger: CCTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACG...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGAGCGGGATCCTCCTTaGGCTCCGGGCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLERDPP*APGSSS
Trigger: TGAAGAAGAGCCCGGAGCCCAAGGAGGATCCCGCTC...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCATGCTTCCGACCCACTTaGACCACACGCCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: VDRALLSANADWVLSVSPCFRPT*TTRPCQ
Trigger: TTGGCATGGGCGTGTGGTCCAAGTGGGTCGGAAGCA...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACCAGACAGCACGGAATaGGGCTTTACAGACACACGC +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSPDSTE*GFTDTR
Trigger: GCGTGTGTCTGTAAAGCCTCATTCCGTGCTGTCTGG...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGCCTTCTCACCATTaGTGCTTGTCATCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPGPSHH*CLSSAQ
Trigger: CTGAGCAGATGACAAGCATCAATGGTGAGAAGGCCC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGGGGGCGTCATGGGGATaGGTCTTCTCTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMGASWG*VFSGLA
Trigger: AGCCAAGCCAGAGAAGACTCATCCCCATGACGCCCC...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCGGGGCGTCATGGGGATaGGTCTTCTCTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGGASWG*VFSGLA
Trigger: AGCCAAGCCAGAGAAGACTCATCCCCATGACGCCCC...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGGTAAATCCATCCTTCTaGGCCAGCCAGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGVNPSF*ASQTFS
Trigger: AGAGAAAGTCTGGCTGGCTCAGAAGGATGGATTTAC...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTCGGATCTTCTCCACTaGGACCCTGCCATCCACACT +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWSDLLH*DPAIHT
Trigger: AGTGTGGATGGCAGGGTCTCAGTGGAGAAGATCCGA...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCCGCTGCTCGCTCTCTaGGATGCCGAGCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHPLLAL*DAEHLH
Trigger: ATGGAGATGCTCGGCATCTCAGAGAGCGAGCAGCGG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCGGATCTGTTGATGAGTaGGACCACAGCCGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGGSVDE*DHSRKE
Trigger: CTCTTTGCGGCTGTGGTCTCACTCATCAACAGATCC...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCACCAGGCTCTTGTTCCGCTGTGGAGCCAGCCCGTaGGGTCGTACCGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: AFSNCSLYSCSSTRLLFRCGASP*GRTAQG
Trigger: ACCCTGTGCGGTACGACCTCACGGGCTGGCTCCACA...GCGGAACAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGCAGCCGGGACCTTTTaGTCATGCTGGTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAAAGTF*SCWSAH
Trigger: ATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGC...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCGCTGCAGACGCTTTCTaGGGAACTCGTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGAADAF*GTRSPS
Trigger: AGATGGAGAACGAGTTCCTCAGAAAGCGTCTGCAGC...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGCTTCAGCTGCTGCTaGAGCTGGCCTAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLCFSCC*SWPSSH
Trigger: GTGGGAGCTAGGCCAGCTTCAGCAGCAGCTGAAGCA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGTGCATGTGTCCTCCTaGGGTCTCTCCGAAGTCGCT +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGVHVSS*GLSEVA
Trigger: AGCGACTTCGGAGAGACCTCAGGAGGACACATGCAC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGTCTCCAGGTCCGCTGTaGGCACCTTCTGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGSPGPL*APSASS
Trigger: TGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGA...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGCCTCTGGCTGGGAGCTaGGGATGGAGACGTTATCCA +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLPLAGS*GWRRYP
Trigger: TGGATAACGTCTCCATCCTCAGCTCCCAGCCAGAGG...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGCGTTTATCCTGGGGCTaGGGATGCGGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRRLSWG*GCGCWW
Trigger: CCACCAGCAGCCGCATCCTCAGCCCCAGGATAAACG...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGCCCCCAACACCGTCTaGAGAGATGCATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSAPNTV*RDAFEA
Trigger: AGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGC...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR TCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGGGGACTCGCAGGAACTaGATTGGGTTTTCGACTTTT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGGTRRN*IGFSTF
Trigger: AAAAGTCGAAAACCCAATTCAGTTCCTGCGAGTCCC...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR TCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTTGCCCACCTTTGGCTaGTCCAGCCAAGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLILPTFG*SSQGGR
Trigger: CCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCAA...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGATGGAGCCGGAGGATaGGGACGAGTCAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSDGAGG*GRVRQV
Trigger: CACCTGTCTGACTCGTCCTCATCCTCCGGCTCCATC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCATGCTGTCAGCACTTTTaGAGGACACGATGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPCCQHF*RTRWSR
Trigger: CCGGCTCCATCGTGTCCTTCAAAAGTGCTGACAGCA...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGTCTTCCCGAATCTTCTaGTCCCACAGGGCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLSSRIF*SHRARR
Trigger: ACGCCTCGCCCTGTGGGAGCAGAAGATTCGGGAAGA...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGTCCCCCGGACCAGTTaGTTAATGAAGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSVPRTS*LMKPPG
Trigger: CCCAGGGGGCTTCATTAAGCAACTGGTCCGGGGGAC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATGTCCCCCGGACCAGTTaGTTAATGAAGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHVPRTS*LMKPPG
Trigger: CCCAGGGGGCTTCATTAAGCAACTGGTCCGGGGGAC...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCTTGATGCTTGTCATCTaGTCAGGGTCGGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGLMLVI*SGSGLR
Trigger: CCGCAGCCCCGACCCTGAGCAGATGACAAGCATCAA...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATTCCCCTGCCTGTCTTTaGCCTGGGGCTCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHSPACL*PGAQPL
Trigger: AAGAGGCTGAGCCCCAGGGCAAAGACAGGCAGGGGA...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTGCTCCCTCCTTCTCTaGTTTCCCTGGTCGCACCCC +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSCSLLL*FPWSHP
Trigger: GGGGTGCGACCAGGGAAAGCAGAGAAGGAGGGAGCA...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGCTCCGAAGCTCACCTaGTTTCTCCCCCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWAPKLT*FLPHSQ
Trigger: CTGAGAATGGGGGAGAAAGCAGGTGAGCTTCGGAGC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGACTCCGAGCTTCACCTaGGTTCCCGGACTTACCCTG +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGTPSFT*VPGLTL
Trigger: CAGGGTAAGTCCGGGAACGCAGGTGAAGCTCGGAGT...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTCCTGCTGGCAGGTCTaGTGTTCCCTCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHSCWQV*CSLIWL
Trigger: AAGCCAGATGAGGGAACAGCAGACCTGCCAGCAGGA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCTCCTGCTGGCAGGTCTaGTGTTCCCTCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFSCWQV*CSLIWL
Trigger: AAGCCAGATGAGGGAACAGCAGACCTGCCAGCAGGA...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACAAGTCTCACCCTTCCTaGTGGCAGGTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHKSHPS*WQVCCS
Trigger: GGAACAGCAGACCTGCCAGCAGGAAGGGTGAGACTT...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGGCCCGATGGACATaGTCCTCATCCACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLLARWT*SSSTSV
Trigger: CACTGAGGTGGATGAGGAGCATGTCCATCGGGCCAA...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTTGGCCCGATGGACATaGTCCTCATCCACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGLARWT*SSSTSV
Trigger: CACTGAGGTGGATGAGGAGCATGTCCATCGGGCCAA...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGTCTCCACTGAGACCCTaGCATCCACACTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLESPLRP*HPHCLP
Trigger: TGGCAGGCAGTGTGGATGGCAGGGTCTCAGTGGAGA...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACTATCTGCCATCTGGTaGAGGTTCAGCTCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSLSAIW*RFSSVL
Trigger: CAGGACGGAGCTGAACCTGCACCAGATGGCAGATAG...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCCTATCTGCCATCTGGTaGAGGTTCAGCTCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLLSAIW*RFSSVL
Trigger: CAGGACGGAGCTGAACCTGCACCAGATGGCAGATAG...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTATCTGCCATCTGGTaGAGGTTCAGCTCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGELSAIW*RFSSVL
Trigger: CAGGACGGAGCTGAACCTGCACCAGATGGCAGATAG...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCAGGTGGTAGATGGCTaGCAGGACCCGCCAAACAGC +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHQVVDG*QDPPNS
Trigger: GCTGTTTGGCGGGTCCTGGCAGCCATCTACCACCTG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGGCCCAAACGTCATTTaGTGGATGATCTGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRGPNVI*WMICRR
Trigger: CCTTCGACAGATCATCCAGCAAATGACGTTTGGGCC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGTCAGCGCATCCATCTaGAGCTTGATCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAVSASI*SLIWEH
Trigger: GTGCTCCCAGATCAAGCTGCAGATGGATGCGCTGAC...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAGTCAGCGCATCCATCTaGAGCTTGATCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: VDRALLSANADWVLSVSPVSASI*SLIWEH
Trigger: GTGCTCCCAGATCAAGCTGCAGATGGATGCGCTGAC...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTTGTCTCTACCAGGCTaGGGTGGTGGTGGAGATTCC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHLSLPG*GGGGDS
Trigger: GGAATCTCCACCACCACCGCAGCCTGGTAGAGACAA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAAGAAAAACTTGGCTGTaGCCCACAGCCACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPRKTWL*PTATAF
Trigger: GAAGGCGGTGGCTGTGGGGCACAGCCAAGTTTTTCT...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGTGGCCAGTCCTTGACTaGGAGGAACACAGCCACATT +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPWPVLD*EEHSHI
Trigger: AATGTGGCTGTGTTCCTCGCAGTCAAGGACTGGCCA...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTAGGGAACCAAGCAGCTaGCACCATGGCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAREPSS*HHGQSL
Trigger: CAAGGACTGGCCATGGTGGCAGCTGCTTGGTTCCCT...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTTCCTTGGCTCGGAGCTaGTCAGTTCCAATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWASLARS*SVPMVA
Trigger: TGCCACCATTGGAACTGAGCAGCTCCGAGCCAAGGA...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAAGCCTCTCCTCGCATTaGTGCAGACGCTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPSLSSH*CRRFLR
Trigger: CCTCAGAAAGCGTCTGCAGCAATGCGAGGAGAGGCT...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGAGGGCCTGGGCCAGCTaGAGGTCAAACTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLERAWAS*RSNFFC
Trigger: GCAGAAGAAGTTTGACCTGCAGCTGGCCCAGGCCCT...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGCTCTGGATTTTCTGTTaGTCAAGGGCGCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRLWIFC*SRALDS
Trigger: GGAATCCAGCGCCCTTGAGCAACAGAAAATCCAGAG...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTCACGGTCCTTCTGGTaGATCTGCTTCATCCGCTCG +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLSRSFW*ICFIRS
Trigger: CGAGCGGATGAAGCAGATGCACCAGAAGGACCGTGA...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTCACGGTCCTTCTGGTaGATCTGCTTCATCCGCTCG +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHSRSFW*ICFIRS
Trigger: CGAGCGGATGAAGCAGATGCACCAGAAGGACCGTGA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCTGCCATCCTCCATGGTaGCCAGAAGGAGCTGCACGT +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGCHPPW*PEGAAR
Trigger: ACGTGCAGCTCCTTCTGGGCACCATGGAGGATGGCA...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCTGCTCCAGCTGGCTGTaGACTTTCTCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGCSSWL*TFSSSS
Trigger: GGAGGAGCTGGAGAAAGTGCACAGCCAGCTGGAGCA...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACACTTGGCTTCACTCTaGTCCAGCTGGCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPHLASL*SSWLCT
Trigger: AGTGCACAGCCAGCTGGAGCAGAGTGAAGCCAAGTG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCACTTGGCTTCACTCTaGTCCAGCTGGCTGTGCACT +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHHLASL*SSWLCT
Trigger: AGTGCACAGCCAGCTGGAGCAGAGTGAAGCCAAGTG...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGTTCTCCAGCTCGCTGTaGATGCTCTCCAGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLEFSSSL*MLSRSA
Trigger: AGCGGACCTGGAGAGCATGCACAGCGAGCTGGAGAA...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTGCAGCCTGTACAGCTaGTCATCCACCAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWCSLYS*SSTRLL
Trigger: CAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCA...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGCAGCCTGTACAGCTaGTCATCCACCAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGCSLYS*SSTRLL
Trigger: CAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCA...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTCCTCCAGCTGCAGCTaGAGTTCTTGGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWSSSCS*SSWICP
Trigger: TGGGCAGATCCAAGAACTGCAGCTGCAGCTGGAGGA...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCTGGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGTGTTCTTGTAGCTTGTaGTTCTCCTTCTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PWLSPLGGRSLATVTRKSCSCSL*FSFLAS
Trigger: GGAAGCCAAGAAGGAGAAGCACAAGCTACAAGAACA...CGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGTTCCAGGTACTCGATaGGCATCTGAGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSVPGTR*ASEPPA
Trigger: TGCAGGTGGCTCAGATGCGCATCGAGTACCTGGAAC...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGTCTCTTTTCGGCCGCTaGTGCCACAATCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGSLFGR*CHNPLP
Trigger: CGGCAGTGGATTGTGGCAGCAGCGGCCGAAAAGAGA...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTGGTGGACCGGGCTCTaGTCAGTGCCAATGCCGACT +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMWWTGL*SVPMPT
Trigger: AGTCGGCATTGGCACTGAGCAGAGCCCGGTCCACCA...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCGGGGAGTAGGGTTGTaGCCCCAACACCGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMRGVGL*PQHRLK
Trigger: CTTCAGACGGTGTTGGGGGCACAACCCTACTCCCCG...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCCGCTGTGAACCGTCTTaGCCACCTTTGGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLRCEPS*PPLADP
Trigger: TGGATCAGCCAAAGGTGGGCAAGACGGTTCACAGCG...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACGCTGTGAACCGTCTTaGCCACCTTTGGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSRCEPS*PPLADP
Trigger: TGGATCAGCCAAAGGTGGGCAAGACGGTTCACAGCG...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGCCGTTTCAAAGTGGATaGTTGAACGCTGTGAACCGT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGPFQSG*LNAVNR
Trigger: ACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGG...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCATCCCCGCAGGATATaGCTCTGTGGGCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIHPRRI*LCGLIS
Trigger: CGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGACAGTCTTTTTGGTTaGTGTCGCACTGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPDSLFG*CRTGAQ
Trigger: CTGGGCTCCAGTGCGACACCAACCAAAAAGACTGTC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATAGTGCCACAGTTCCTTaGCCTGGGTCCCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHSATVP*PGSPRP
Trigger: GGGTCTTGGGGACCCAGGCCAAGGAACTGTGGCACT...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCCTCTTTCAGCTCTGTaGTCTTGGGGGTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGPLSAL*SWGSQA
Trigger: GGCTTGGGACCCCCAAGACCACAGAGCTGAAAGAGG...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTTGTCCTTCTTATTCTaGGGACCGTCCCACTTACTC +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGLSFLF*GPSHLL
Trigger: GAGTAAGTGGGACGGTCCCCAGAATAAGAAGGACAA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTTCCCGGACTTACCCTaGGGTTGCCCCATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHFPDLP*GCPIFS
Trigger: GGAAAAGATGGGGCAACCCCAGGGTAAGTCCGGGAA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCATTCCCGGACTTACCCTaGGGTTGCCCCATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPFPDLP*GCPIFS
Trigger: GGAAAAGATGGGGCAACCCCAGGGTAAGTCCGGGAA...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCCAGAGCAGGCTGGCTaGGTCCTTCCAGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHPEQAG*VLPALS
Trigger: AGACAGAGCTGGAAGGACCCAGCCAGCCTGCTCTGG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTTCTCCAGAGCAGGCTaGCTGGGTCCTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHFSRAG*LGPSSS
Trigger: AGAGCTGGAAGGACCCAGCCAGCCTGCTCTGGAGAA...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTCTCACCCTTCCTGCTaGCAGGTCTGCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHSHPSC*QVCCSL
Trigger: GAGGGAACAGCAGACCTGCCAGCAGGAAGGGTGAGA...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCAGACTGGTGCAGGACCTaGGGTGCATCCAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPDWCRT*GASRAE
Trigger: CTCGGCCCTGGATGCACCCCAGGTCCTGCACCAGTC...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCACCAGGCTGCGGTGGTaGTGGAGATTCCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLTRLRW*WRFLPT
Trigger: AGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGT...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCTGGACCCTCAGTGCTaGGATATCCAGGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLLDPQC*DIQGQR
Trigger: CCTCTGGCCCTGGATATCCCAGCACTGAGGGTCCAG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTGGAACCCAGCAAGCTaGACCCTCAGTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLWNPAS*TLSAGI
Trigger: TATCCCAGCACTGAGGGTCCAGCTTGCTGGGTTCCA...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGGAACCCAGCAAGCTaGACCCTCAGTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGWNPAS*TLSAGI
Trigger: TATCCCAGCACTGAGGGTCCAGCTTGCTGGGTTCCA...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCTGGAACCCAGCAAGCTaGACCCTCAGTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFWNPAS*TLSAGI
Trigger: TATCCCAGCACTGAGGGTCCAGCTTGCTGGGTTCCA...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGAGAGCCTCCAGGATGTaGAACCCAGCAAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGRASRM*NPASWT
Trigger: GGTCCAGCTTGCTGGGTTCCACATCCTGGAGGCTCT...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGCCTTGAGAAAAACTTaGCTGTGCCCCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSALRKT*LCPTAT
Trigger: GGTGGCTGTGGGGCACAGCCAAGTTTTTCTCAAGGC...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCGCACTAAGTAGAGGCTaGAGGGAACCAAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGALSRG*REPSSC
Trigger: GCAGCTGCTTGGTTCCCTCCAGCCTCTACTTAGTGC...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAGCACTAAGTAGAGGCTaGAGGGAACCAAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VDRALLSANADWVLSVSPALSRG*REPSSC
Trigger: GCAGCTGCTTGGTTCCCTCCAGCCTCTACTTAGTGC...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGTTGCTCTTGAGCTCCTaGACCTCCCGGAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGLLLSS*TSRKAC
Trigger: ACAGGCCTTCCGGGAGGTCCAGGAGCTCAAGAGCAA...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCAGCTCCAGCTCTTTCCTaGCTGTCAGCTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: EDAVWATTACPWVWSESSAPALS*LSAPSP
Trigger: TGGACTCGGAGCTGACAGCCAGGAAAGAGCTGGAGC...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGGTGAGCCATCTTCTTaGCCCCGTCATAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRGEPSS*PRHKHF
Trigger: AAAGTGCTTATGACGGGGCCAAGAAGATGGCTCACC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTCACAGGTAAGATaGTGGCACTTCCTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGRSQVR*WHFLFS
Trigger: ACTGAAGAGGAAGTGCCACCATCTTACCTGTGACCT...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTCCTCACGGTCCTTCTaGTGCATCTGCTTCATCCGC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHSSRSF*CICFIR
Trigger: GCGGATGAAGCAGATGCACCAGAAGGACCGTGAGGA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTCCCGATGGCCAATCTaGTCACAGAGGGTTCCGATC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHSRWPI*SQRVPI
Trigger: GATCGGAACCCTCTGTGACCAGATTGGCCATCGGGA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGTCTCCAGGTCTGTCTaGAGGGTTTGCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWVSRSV*RVCLTA
Trigger: AGCAGTGAGGCAAACCCTCCAGACAGACCTGGAGAC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGATGCGGCTGCTGGTaGCTGACTGTCGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSGCGCW*LTVEKE
Trigger: CTCCTTCTCGACAGTCAGCCACCAGCAGCCGCATCC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGTGCTGTGGACATTGGTaGACCGGGCTCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLECCGHW*TGLCSV
Trigger: CACTGAGCAGAGCCCGGTCCACCAATGTCCACAGCA...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCCTGAGGTCTTGCTGTaGACATTGGTGGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGPEVLL*TLVDRA
Trigger: AGCCCGGTCCACCAATGTCCACAGCAAGACCTCAGG...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTGCCGGCGGACAAAGTaGGGAGAAACAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHCRRTK*GETGLS
Trigger: AGACAAGCCTGTTTCTCCCCACTTTGTCCGCCGGCA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTCTGTGGACTTTCTCTaGACGGCAAGCACTTCGCCG +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLSVDFL*TASTSP
Trigger: CGGCGAAGTGCTTGCCGTCCAGAGAAAGTCCACAGA...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGCCGCTGAAGGACTaGGCAGCTTTTCCCTCGACA +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSGPLKD*AAFPST
Trigger: TGTCGAGGGAAAAGCTGCCCAGTCCTTCAGCGGCCC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCCCAGCGTGGACCCCTaGCCTCTCTGGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: DALQEVRLLKLQPVQLLIPSVDP*PLWALF
Trigger: GAAGAGAGCCCAGAGAGGCCAGGGGTCCACGCTGGG...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGGCATGTCCCTGGGTGTaGTCGGAGAGCTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGEACPWV*SESSVF
Trigger: GAAAACTGAGCTCTCCGACCACACCCAGGGACATGC...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCGCATGTCCCTGGGTGTaGTCGGAGAGCTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLACPWV*SESSVF
Trigger: GAAAACTGAGCTCTCCGACCACACCCAGGGACATGC...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTACAACAGCATGTCCCTaGGTGTGGTCGGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWATTACP*VWSESS
Trigger: TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGT...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCTCCTTTCCAAGGTCTaGACAGCCCGCATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLILLSKV*TARIVH
Trigger: GTGGACGATGCGGGCTGTCCAGACCTTGGAAAGGAG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGGGTTCCTCCATCAGGTaGGCAAACTGGCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGGSSIR*ANWRFW
Trigger: CCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACC...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGCATCGAAGTCCACTTTaGTCTTGCGTTCGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGHRSPL*SCVRSR
Trigger: TCGACTACGAACGCAAGACCAAAGTGGACTTCGATG...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGAAGGAGGTAGGTGTCTaGGGCTTCCGGATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLKEVGV*GFRIAG
Trigger: CCCAGCTATCCGGAAGCCCCAGACACCTACCTCCTT...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATAAGGAGGTAGGTGTCTaGGGCTTCCGGATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHKEVGV*GFRIAG
Trigger: CCCAGCTATCCGGAAGCCCCAGACACCTACCTCCTT...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGAGCGGGATCCTCCTTaGGCTCCGGGCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHERDPP*APGSSS
Trigger: TGAAGAAGAGCCCGGAGCCCAAGGAGGATCCCGCTC...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTCAAGGAGGCTGAACTaGTTCCTACTTCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGSRRLN*FLLLEV
Trigger: TACCTCCAGAAGTAGGAACCAGTTCAGCCTCCTTGA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR TCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGCCAGACAGCACGGAATaGGGCTTTACAGACACACGC +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLEPDSTE*GFTDTR
Trigger: GCGTGTGTCTGTAAAGCCTCATTCCGTGCTGTCTGG...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCAGTGCCAGGGCCGTaGGATGATGAGATGAGATGG +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHAVPGP*DDEMRW
Trigger: CCATCTCATCTCATCATCTCACGGCCCTGGCACTGC...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTGCTGTTGGGTTGGCTaGTGGAAATTTCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRCCWVG*WKFLGS
Trigger: AGATCCCAGAAATTTCCATCAGCCAACCCAACAGCA...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTCTCCATCTGGGTCTaGGGCTCACCTGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLFSIWV*GSPVFS
Trigger: AGAGAAGACAGGTGAGCCTCAGACCCAGATGGAGAA...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGTCGGATCTTCTCCACTaGGACCCTGCCATCCACACT +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLSDLLH*DPAIHT
Trigger: AGTGTGGATGGCAGGGTCTCAGTGGAGAAGATCCGA...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATAGCATTGTCTGGAGCTaGGCAGCTGTGATGCGGCCT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHSIVWS*AAVMRP
Trigger: AGGCCGCATCACAGCTGCTCAGCTCCAGACAATGCT...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTGTCATCTTGAGCCCTaGGCTGGTTTCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHCHLEP*AGFLIL
Trigger: GAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCCACTCCTGTCATCTTaGGCCCTGAGCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIPLLSS*ALSWFP
Trigger: AGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCATCCATCTGCAGCTTaGTCTGGGAGCACGGGGCTT +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSHPSAA*SGSTGL
Trigger: AAGCCCCGTGCTCCCAGATCAAGCTGCAGATGGATG...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCCTCGGAGGTCGACATaGGCTTCTTCAGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMPRRST*ASSGVE
Trigger: CTCCACTCCTGAAGAAGCTCATGTCGACCTCCGAGG...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCAAGAGAACGATGCTCTaGGATACCAGCTTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGKRTML*DTSFSR
Trigger: GCGAGAGAAGCTGGTATCTCAGAGCATCGTTCTCTT...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCAGCTCCTCCTTGCTaGCTGATGTCTTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHPAPPC*LMSCHP
Trigger: AGGATGGCAAGACATCAGTCAGCAAGGAGGAGCTGG...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCCAGCAGACTGAGCAATaGGGTCCTTGTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFQQTEQ*GPCASA
Trigger: TGCAGAAGCACAAGGACCTCATTGCTCAGTCTGCTG...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATGTCAGCAGCAGACTaGGCAATGAGGTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLMSAAD*AMRSLC
Trigger: GCACAAGGACCTCATTGCTCAGTCTGCTGCTGACAT...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGCCCCCAACACCGTCTaGAGAGATGCATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGAPNTV*RDAFEA
Trigger: AGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR TCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTTGCCCACCTTTGGCTaGTCCAGCCAAGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSLPTFG*SSQGGR
Trigger: CCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCAA...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATTTGCCCACCTTTGGCTaGTCCAGCCAAGGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHLPTFG*SSQGGR
Trigger: CCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCAA...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTGCTGTCAGCACTTTTaGAGGACACGATGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLICCQHF*RTRWSR
Trigger: CCGGCTCCATCGTGTCCTTCAAAAGTGCTGACAGCA...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTTGCTGTCAGCACTTTTaGAGGACACGATGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHACCQHF*RTRWSR
Trigger: CCGGCTCCATCGTGTCCTTCAAAAGTGCTGACAGCA...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGCTTCAAGGAGGCTaGACTGGTTCCTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAQLQGG*TGSYFW
Trigger: CCAGAAGTAGGAACCAGTTCAGCCTCCTTGAAGCTG...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR TCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCCTGGAGGAAGTGAGCTaGAACTGGCCAAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLLEEVS*NWPSEE
Trigger: CTCTTCACTTGGCCAGTTTCAGCTCACTTCCTCCAG...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCTTCCCGAATCTTCTaGTCCCACAGGGCGAGGCGT +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLSSRIF*SHRARR
Trigger: ACGCCTCGCCCTGTGGGAGCAGAAGATTCGGGAAGA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGGAGGCGACAGCTAACTaGTTCCTCTGTCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGEATAN*FLCLAS
Trigger: GGAAGCGAGACAGAGGAAGCAGTTAGCTGTCGCCTC...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGATCTGGTGCCACTaGTGGACTTGCTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAQIWCH*WTCCWV
Trigger: AACCCAACAGCAAGTCCAGCAGTGGCACCAGATCTG...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCACCCCTCGCTCTCCTTaGCCAGAATGTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLTPRSP*PECLSS
Trigger: GGAGCTCAGACATTCTGGGCAAGGAGAGCGAGGGGT...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCTGCCTTCCCAGTCGTaGTCCGAAGCTCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLLPSQS*SEAHLL
Trigger: AAGCAGGTGAGCTTCGGAGCACGACTGGGAAGGCAG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCTCCTGCTGGCAGGTCTaGTGTTCCCTCATCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGSCWQV*CSLIWL
Trigger: AAGCCAGATGAGGGAACAGCAGACCTGCCAGCAGGA...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCAGAACCGGGTGGCACTaGGGCTGTGGGCCATGGACA +
Preference number: 4 (lower is better)
Translates to: DALQEVRLLKLQPVQLLIRTGWH*GCGPWT
Trigger: TGTCCATGGCCCACAGCCGCAGTGCCACCCGGTTCT...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCCTTTCTTCTCGAAAGCAGCACACAGACGCTCGAGCACCACACTGTCACTGGCCCTTCCGGCTGCCGTaGCACGCGGCTCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LLSSRKQHTDARAPHCHWPFRLP*HAALLQ
Trigger: TTGGAGAAGAGCCGCGTGGCACGGCAGCCGGAAGGG...CCAGTGACAGTGTGGTGCTCGAGCGTCTGTGTGCTGCTTTCGAGAAGAAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTTGGACCACACGCCCATaGCAAAGGAGCTGCTATCTG +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAWTTRP*QRSCYL
Trigger: CAGATAGCAGCTCCTTTGGCATGGGCGTGTGGTCCA...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTGGACCACACGCCCATaGCAAAGGAGCTGCTATCTG +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIWTTRP*QRSCYL
Trigger: CAGATAGCAGCTCCTTTGGCATGGGCGTGTGGTCCA...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCATGGACCACACGCCCATaGCAAAGGAGCTGCTATCTG +
Preference number: 4 (lower is better)
Translates to: EDAVWATTACPWVWSESSWTTRP*QRSCYL
Trigger: CAGATAGCAGCTCCTTTGGCATGGGCGTGTGGTCCA...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCCCAGGGCCTCAGCTaGGTAGTTTGCCCACTCAAA +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHAQGLS*VVCPLK
Trigger: TTTGAGTGGGCAAACTACGCAGCTGAGGCCCTGGGC...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCAGTGCAGGACCTGGGGTaGATCCAGGGCCGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPVQDLG*IQGREV
Trigger: AACCTCTCGGCCCTGGATGCACCCCAGGTCCTGCAC...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTACCATGCGGCTCCTCTaGAGGGCCTGCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLTMRLL*RACWEV
Trigger: CACCTCCCAGCAGGCCCTGCAGAGGAGCCGCATGGT...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTGGTGGAGATTCCTaGCCACTCCTGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSGGGDS*PLLLST
Trigger: GGTGGAAAGCAGGAGTGGGCAGGAATCTCCACCACC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTAAGCTGGACCCTCAGTaGTGGGATATCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSKLDPQ*WDIQGQ
Trigger: CTGGCCCTGGATATCCCAGCACTGAGGGTCCAGCTT...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCTTCTGGATGCACTGTaGAGCCAGTCGGCGAATCTT +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHLLDAL*SQSANL
Trigger: AAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAG...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTTCTGGATGCACTGTaGAGCCAGTCGGCGAATCTT +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPLLDAL*SQSANL
Trigger: AAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCCACATTCTTCTGGATaGACTGTGCAGCCAGTCGGC +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGPHSSG*TVQPVG
Trigger: GCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGG...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTGGCCAGTCCTTGACTaGGAGGAACACAGCCACATT +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLWPVLD*EEHSHI
Trigger: AATGTGGCTGTGTTCCTCGCAGTCAAGGACTGGCCA...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCAGGGAACCAAGCAGCTaGCACCATGGCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGREPSS*HHGQSL
Trigger: CAAGGACTGGCCATGGTGGCAGCTGCTTGGTTCCCT...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCAGTCGAAGCGCATCTaGCACTCGTCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLQSKRI*HSSAPP
Trigger: TGGAGGAGCAGACGAGTGGCAGATGCGCTTCGACTG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCAGGGCCTGGGCCAGCTaGAGGTCAAACTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGRAWAS*RSNFFC
Trigger: GCAGAAGAAGTTTGACCTGCAGCTGGCCCAGGCCCT...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCTCTGGATTTTCTGTTaGTCAAGGGCGCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGLWIFC*SRALDS
Trigger: GGAATCCAGCGCCCTTGAGCAACAGAAAATCCAGAG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTTCCTTCTGGTGCATCTaGTTCATCCGCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWASFWCI*FIRSIS
Trigger: GGAGATCGAGCGGATGAAGCAGATGCACCAGAAGGA...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGTCCTTCTGGTGCATCTaGTTCATCCGCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGESFWCI*FIRSIS
Trigger: GGAGATCGAGCGGATGAAGCAGATGCACCAGAAGGA...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGGTGCCCAGAAGGAGCTaGACGTCTGACAACAGTGCA +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGVPRRS*TSDNSA
Trigger: TGCACTGTTGTCAGACGTGCAGCTCCTTCTGGGCAC...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGTGCCCAGAAGGAGCTaGACGTCTGACAACAGTGCA +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAVPRRS*TSDNSA
Trigger: TGCACTGTTGTCAGACGTGCAGCTCCTTCTGGGCAC...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATTGCCATCCTCCATGGTaGCCAGAAGGAGCTGCACGT +
Preference number: 4 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHCHPPW*PEGAAR
Trigger: ACGTGCAGCTCCTTCTGGGCACCATGGAGGATGGCA...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGGCTGTGAGCACCTTCTaGGTCTTCAAGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGAVSTF*VFKASS
Trigger: TGAGGAGGCCTTGAAGACGCAGAAGGTGCTCACAGC...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTCCGCCTTCTCAAACTaGAGCCTGTACAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLSAFSN*SLYSCS
Trigger: TGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGA...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTCCTCCAGCTGCAGCTaGAGTTCTTGGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHSSSCS*SSWICP
Trigger: TGGGCAGATCCAAGAACTGCAGCTGCAGCTGGAGGA...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTTGGCTTCCTCCAGCTaGAGCTGCAGTTCTTGGATC +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGLASSS*SCSSWI
Trigger: GATCCAAGAACTGCAGCTGCAGCTGGAGGAAGCCAA...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACGAGGGTTTGCCTCACTaGTGCAAGTTCCTCCACGTA +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHEGLPH*CKFLHV
Trigger: TACGTGGAGGAACTTGCAGCAGTGAGGCAAACCCTC...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCGAGGGTTTGCCTCACTaGTGCAAGTTCCTCCACGTA +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLEGLPH*CKFLHV
Trigger: TACGTGGAGGAACTTGCAGCAGTGAGGCAAACCCTC...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTGTCTGGAGGGTTTaGCTCACTGCTGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGSVWRV*LTAASS
Trigger: GGAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGA...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCTTTTCGGCCGCTGCTaGCACAATCCACTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHLFGRC*HNPLPS
Trigger: AGACGGCAGTGGATTGTGGCAGCAGCGGCCGAAAAG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTTCTGCTCAGTGCCAATaGCGACTGGGTCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHASAQCQ*RLGPLS
Trigger: ACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGA...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCCCGGGCTCTGCTCAGTaGCAATGCCGACTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKAPGSAQ*QCRLGP
Trigger: AGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGG...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGCCGGGCTCTGCTCAGTaGCAATGCCGACTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVPGSAQ*QCRLGP
Trigger: AGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGG...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGTGGACCGGGCTCTaGTCAGTGCCAATGCCGACT +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLWWTGL*SVPMPT
Trigger: AGTCGGCATTGGCACTGAGCAGAGCCCGGTCCACCA...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCATGTCTCCTGAGGTCTTaGTGTGGACATTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPCLLRS*CGHWWT
Trigger: GGTCCACCAATGTCCACAGCAAGACCTCAGGAGACA...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GTAAGCGGACCTGAGAGGGATTTTGATCCACAACAGCCACGGTGGTCCCTGGGGAGGGGGCGAGGATGGTaGAGGGCTCTTGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VSGPERDFDPQQPRWSLGRGRGW*RALVLF
Trigger: GAAGAGGACAAGAGCCCTCCACCATCCTCGCCCCCT...CCCCAGGGACCACCGTGGCTGTTGTGGATCAAAATCCCTCTCAGGTCCGCTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTCTGTCTCGCTTCCTTaGCCTCTTTTTCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLSVSLP*PLFQSP
Trigger: GGGGGACTGAAAAAGAGGCCAAGGAAGCGAGACAGA...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGCTGGCTTCCAGATCTaGTGCCACTGCTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSAGFQI*CHCWTC
Trigger: GCAAGTCCAGCAGTGGCACCAGATCTGGAAGCCAGC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCATCTCGGTGCTGGCCTaGGAGCCACAAGGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLISVLA*EPQGVL
Trigger: TAGGACTCCTTGTGGCTCCCAGGCCAGCACCGAGAT...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGAACTCGCCCTGCACTTaGCTTGTCTTCTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWNSPCT*LVFSIW
Trigger: CCAGATGGAGAAGACAAGCCAAGTGCAGGGCGAGTT...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACAACTCGCCCTGCACTTaGCTTGTCTTCTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHNSPCT*LVFSIW
Trigger: CCAGATGGAGAAGACAAGCCAAGTGCAGGGCGAGTT...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCTTCCCAGGAGCTGCTaGCGACTCCACCATTGTGCT +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLLPRSC*RLHHCA
Trigger: AGCACAATGGTGGAGTCGCCAGCAGCTCCTGGGAAG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTGCCATGGAGCCAATGTaGGCAGGCAGGCCATCCCGG +
Preference number: 4 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLAMEPM*AGRPSR
Trigger: CCGGGATGGCCTGCCTGCCCACATTGGCTCCATGGC...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAATCCAGCCAGCATCTaGGAGAAAACCAGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGNPASI*EKTRKL
Trigger: TAACTTCCTGGTTTTCTCCCAGATGCTGGCTGGATT...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCTGCTATCTGCCATCTaGTGCAGGTTCAGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGLLSAI*CRFSSV
Trigger: GACGGAGCTGAACCTGCACCAGATGGCAGATAGCAG...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCATGATCTGTCGAAGGTaGTGCTTGAAGGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFMICRR*CLKVAV
Trigger: CACGGCCACCTTCAAGCACCACCTTCGACAGATCAT...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGGAGGCCCCATCGGCTTaGCCCAAACGTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMEAPSA*PKRHLL
Trigger: CAGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTC...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATGAGGCCCCATCGGCTTaGCCCAAACGTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHEAPSA*PKRHLL
Trigger: CAGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTC...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCAGGCCTCTGGCATCCTaGGCACCTCCTCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: DALQEVRLLKLQPVQLLIRPLAS*APPPAG
Trigger: ACCAGCTGGAGGAGGTGCCCAGGATGCCAGAGGCCT...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTCCAGGGCCGAGAGGTTaGGCTTGGCTCTGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLPGPRG*AWLCGA
Trigger: GGCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGG...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTCCTCTCTTTTTGACTaGTGCAGGACCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLSSLFD*CRTWGA
Trigger: TGCACCCCAGGTCCTGCACCAGTCAAAAAGAGAGGA...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTATCTGCAGCTTGATCTaGGAGCACGGGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAICSLI*EHGAFL
Trigger: GAGGAAAGCCCCGTGCTCCCAGATCAAGCTGCAGAT...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTTTGGTACCAGGCAGTaGATAAAGTGCAGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWFGTRQ*IKCSRD
Trigger: GTCCCGGCTGCACTTTATCCACTGCCTGGTACCAAA...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGAGCTTCTTCAGGAGTaGAGCGTCCAGCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLELLQE*SVQHLE
Trigger: TTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTC...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCGTTGCTCAAGGGCGCTaGATTCCAACTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIVAQGR*IPTSRA
Trigger: GGCTCTGGAAGTTGGAATCCAGCGCCCTTGAGCAAC...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTTCCTCACGGTCCTTCTaGTGCATCTGCTTCATCCGC +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHASSRSF*CICFIR
Trigger: GCGGATGAAGCAGATGCACCAGAAGGACCGTGAGGA...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGACATCAAAGTCCCGATaGCCAATCTGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPTSKSR*PIWSQR
Trigger: CCTCTGTGACCAGATTGGCCATCGGGACTTTGATGT...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGTCTTGCCATCCTCCATaGTGCCCAGAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLSCHPP*CPEGAA
Trigger: TGCAGCTCCTTCTGGGCACCATGGAGGATGGCAAGA...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATAGGCCTCCTCACACTTaGCTTCACTCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHRPPHT*LHSAPA
Trigger: AGCTGGAGCAGAGTGAAGCCAAGTGTGAGGAGGCCT...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCTGCAGCTGCAGTTCTTaGATCTGCCCAATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGCSCSS*ICPMSA
Trigger: TGCTGACATTGGGCAGATCCAAGAACTGCAGCTGCA...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGTCTCCAGGTCTGTCTaGAGGGTTTGCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGVSRSV*RVCLTA
Trigger: AGCAGTGAGGCAAACCCTCCAGACAGACCTGGAGAC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAATCCACTGCCGTCTaGACACTCTCAGTATCACTG +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGQSTAV*TLSVSL
Trigger: CAGTGATACTGAGAGTGTCCAGACGGCAGTGGATTG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGCTGTGGACATTGGTaGACCGGGCTCTGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLCCGHW*TGLCSV
Trigger: CACTGAGCAGAGCCCGGTCCACCAATGTCCACAGCA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGTCTTGCTGTGGACATTaGTGGACCGGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLESCCGH*WTGLCS
Trigger: TGAGCAGAGCCCGGTCCACCAATGTCCACAGCAAGA...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGTGCCGGCGGACAAAGTaGGGAGAAACAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLCRRTK*GETGLS
Trigger: AGACAAGCCTGTTTCTCCCCACTTTGTCCGCCGGCA...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTAAATGGGGAGAGTaGGCCAGTCCTCTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSGKWGE*ASPLGP
Trigger: TGGGCCTAGAGGACTGGCCCACTCTCCCCATTTACC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGTCCCCATGCTCGGTCTaGATTCTAAGAGGGACTCGC +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLESPCSV*ILRGTR
Trigger: GCGAGTCCCTCTTAGAATCCAGACCGAGCATGGGGA...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGCATGTCCCTGGGTGTaGTCGGAGAGCTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGACPWV*SESSVF
Trigger: GAAAACTGAGCTCTCCGACCACACCCAGGGACATGC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCATGTCCCTGGGTGTaGTCGGAGAGCTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLACPWV*SESSVF
Trigger: GAAAACTGAGCTCTCCGACCACACCCAGGGACATGC...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTACAACAGCATGTCCCTaGGTGTGGTCGGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHATTACP*VWSESS
Trigger: TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGT...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGACAACAGCATGTCCCTaGGTGTGGTCGGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLTTACP*VWSESS
Trigger: TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGT...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCTCCTTTCCAAGGTCTaGACAGCCCGCATCGTCCAC +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLLLSKV*TARIVH
Trigger: GTGGACGATGCGGGCTGTCCAGACCTTGGAAAGGAG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGATCAGGTGGGCAAACTaGCGGTTCTGGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPIRWAN*RFWKTS
Trigger: GCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGAT...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCGGTTCCTCCATCAGGTaGGCAAACTGGCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLGSSIR*ANWRFW
Trigger: CCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACC...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGGGCTTCCGGATAGCTaGGAGGAAGTCATCGAAGTC +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLGLPDS*EEVIEV
Trigger: GACTTCGATGACTTCCTCCCAGCTATCCGGAAGCCC...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATGGGCTTCCGGATAGCTaGGAGGAAGTCATCGAAGTC +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHGLPDS*EEVIEV
Trigger: GACTTCGATGACTTCCTCCCAGCTATCCGGAAGCCC...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCGTCTTGCCCACCTTTaGCTGATCCAGCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSRLAHL*LIQPRR
Trigger: CCTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACG...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTCAAGGAGGCTGAACTaGTTCCTACTTCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRSRRLN*FLLLEV
Trigger: TACCTCCAGAAGTAGGAACCAGTTCAGCCTCCTTGA...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR TCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGACACACGCAGCACATaGGATGGACACAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWDTRST*DGHRTS
Trigger: AGAAGTTCTGTGTCCATCTCATGTGCTGCGTGTGTC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGACACACGCAGCACATaGGATGGACACAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWADTRST*DGHRTS
Trigger: AGAAGTTCTGTGTCCATCTCATGTGCTGCGTGTGTC...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATATGAGATGGCCATGCTaGGGCAGTGCCAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDMRWPC*GSARAV
Trigger: CACGGCCCTGGCACTGCCTCAGCATGGCCATCTCAT...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCTTCTCCATCTGGGTCTaGGGCTCACCTGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGFSIWV*GSPVFS
Trigger: AGAGAAGACAGGTGAGCCTCAGACCCAGATGGAGAA...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTCGGATCTTCTCCACTaGGACCCTGCCATCCACACT +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMSDLLH*DPAIHT
Trigger: AGTGTGGATGGCAGGGTCTCAGTGGAGAAGATCCGA...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGAGCATTGTCTGGAGCTaGGCAGCTGTGATGCGGCCT +
Preference number: 4 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRSIVWS*AAVMRP
Trigger: AGGCCGCATCACAGCTGCTCAGCTCCAGACAATGCT...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCCCACTCAAACCTCATaGACTGCTTCCGACCCACTT +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIPTQTS*TASDPL
Trigger: AAGTGGGTCGGAAGCAGTTCATGAGGTTTGAGTGGG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAACGTCATTTGCTGGATaGTCTGTCGAAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPTSFAG*SVEGGA
Trigger: AGCACCACCTTCGACAGATCATCCAGCAAATGACGT...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGGGAACACCTTCCTCTTaGTATCGCTGTAGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGGTPSS*YRCSVE
Trigger: CTCCACGCTACAGCGATATCAAGAGGAAGGTGTTCC...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGAGGCCACATCACCTTTaGAGCGCTCATCGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMRPHHL*SAHRQG
Trigger: ACCTTGCCGATGAGCGCTTCAAAGGTGATGTGGCCT...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGAACTCGTTCTCCATCTaGGCACAGTCGAAGCGCATC +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLNSFSI*AQSKRI
Trigger: GATGCGCTTCGACTGTGCTCAGATGGAGAACGAGTT...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGAAGGAGCTGCACGTCTaGCAACAGTGCATGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLKELHV*QQCMCP
Trigger: AGGACACATGCACTGTTGTCAGACGTGCAGCTCCTT...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTATGTCAGCAGCAGACTaGGCAATGAGGTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAMSAAD*AMRSLC
Trigger: GCACAAGGACCTCATTGCTCAGTCTGCTGCTGACAT...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGTACTCGATGCGCATCTaGGCCACCTGCAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLYSMRI*ATCSCS
Trigger: AGAACAACTGCAGGTGGCTCAGATGCGCATCGAGTA...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCGGGACTCGCAGGAACTaGATTGGGTTTTCGACTTTT +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGGTRRN*IGFSTF
Trigger: AAAAGTCGAAAACCCAATTCAGTTCCTGCGAGTCCC...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR TCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCAGCTTCAAGGAGGCTaGACTGGTTCCTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGQLQGG*TGSYFW
Trigger: CCAGAAGTAGGAACCAGTTCAGCCTCCTTGAAGCTG...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGACCCCTCGCTCTCCTTaGCCAGAATGTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLTPRSP*PECLSS
Trigger: GGAGCTCAGACATTCTGGGCAAGGAGAGCGAGGGGT...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATATTTGGGGCCTTACGTaGTTCCCTTCACTCCCTACG +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHIWGLT*FPSLPT
Trigger: CGTAGGGAGTGAAGGGAAGCACGTAAGGCCCCAAAT...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGACTCCGAGCTTCACCTaGGTTCCCGGACTTACCCTG +
Preference number: 4 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRTPSFT*VPGLTL
Trigger: CAGGGTAAGTCCGGGAACGCAGGTGAAGCTCGGAGT...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTATCCGAGGCCTTTCTaGATCCTTCTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIYPRPF*ILLQSR
Trigger: CCTGCTCTGGAGAAGGATGCAGAAAGGCCTCGGATA...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCATATCCGAGGCCTTTCTaGATCCTTCTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: EDAVWATTACPWVWSESSYPRPF*ILLQSR
Trigger: CCTGCTCTGGAGAAGGATGCAGAAAGGCCTCGGATA...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGTCTCCACTGAGACCCTaGCATCCACACTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRSPLRP*HPHCLP
Trigger: TGGCAGGCAGTGTGGATGGCAGGGTCTCAGTGGAGA...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCCATGCCAAAGGAGCTaGTATCTGCCATCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGPCQRS*YLPSGA
Trigger: TGCACCAGATGGCAGATAGCAGCTCCTTTGGCATGG...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTGTCTCTACCAGGCTaGGGTGGTGGTGGAGATTCC +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLLSLPG*GGGGDS
Trigger: GGAATCTCCACCACCACCGCAGCCTGGTAGAGACAA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCCTGGAGATCACACCTaGCTTGAGAAAAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGPGDHT*LEKNLA
Trigger: AGCCAAGTTTTTCTCAAGGCAGGTGTGATCTCCAGG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGCAGATCTGTGTTCTaGCGGAGTTCATTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLSRSVF*RSSFRN
Trigger: GTTGCGGAATGAACTCCGGCAGAACACAGATCTGCT...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCAGCATCTCCACCTGCTaGTTCAGCTGTGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLSISTC*FSCEAS
Trigger: GGAAGCCTCACAGCTGAAGCAGCAGGTGGAGATGCT...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCAGCATCTCCACCTGCTaGTTCAGCTGTGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGSISTC*FSCEAS
Trigger: GGAAGCCTCACAGCTGAAGCAGCAGGTGGAGATGCT...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTCTGGATTTTCTGTTaGTCAAGGGCGCTGGATTCC +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPLWIFC*SRALDS
Trigger: GGAATCCAGCGCCCTTGAGCAACAGAAAATCCAGAG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTTGATGGTGTTTTCCTaGTGGCTCTGGATTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGLMVFS*WLWIFC
Trigger: ACAGAAAATCCAGAGCCAGCAGGAAAACACCATCAA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTCACGGTCCTTCTGGTaGATCTGCTTCATCCGCTCG +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMSRSFW*ICFIRS
Trigger: CGAGCGGATGAAGCAGATGCACCAGAAGGACCGTGA...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTTGGCTTCCTCCAGCTaGAGCTGCAGTTCTTGGATC +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHLASSS*SCSSWI
Trigger: GATCCAAGAACTGCAGCTGCAGCTGGAGGAAGCCAA...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTGTTCTTGTAGCTTGTaGTTCTCCTTCTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRCSCSL*FSFLAS
Trigger: GGAAGCCAAGAAGGAGAAGCACAAGCTACAAGAACA...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTCTGTCTGGAGGGTTTaGCTCACTGCTGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHSVWRV*LTAASS
Trigger: GGAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGA...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCATCACTGTCACTGGATaGCACTTCTTCCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGITVTG*HFFQGS
Trigger: GCTGCCTTGGAAGAAGTGGCATCCAGTGACAGTGAT...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGCTGCCACAATCCACTaGCGTCTGGACACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSAATIH*RLDTLS
Trigger: ACTGAGAGTGTCCAGACGGCAGTGGATTGTGGCAGC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATTCTGCTCAGTGCCAATaGCGACTGGGTCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHSAQCQ*RLGPLS
Trigger: ACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGA...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCCGGGGAGTAGGGTTGTaGCCCCAACACCGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKARGVGL*PQHRLK
Trigger: CTTCAGACGGTGTTGGGGGCACAACCCTACTCCCCG...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGTCCACTTTGGTCTTaGGTTCGTAGTCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLSPLWS*VRSRGL
Trigger: CAAGCCTCGACTACGAACGCAAGACCAAAGTGGACT...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCAGTCCACTTTGGTCTTaGGTTCGTAGTCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGSPLWS*VRSRGL
Trigger: CAAGCCTCGACTACGAACGCAAGACCAAAGTGGACT...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGACTTGCTGTTGGGTTaGCTGATGGAAATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPDLLLG*LMEISG
Trigger: CCCAGAAATTTCCATCAGCCAACCCAACAGCAAGTC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGACAGTCTTTTTGGTTaGTGTCGCACTGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGDSLFG*CRTGAQ
Trigger: CTGGGCTCCAGTGCGACACCAACCAAAAAGACTGTC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGAGTCCGGGTCCAGCTTaGCCACCATCAACAACACAT +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLSPGPA*PPSTTH
Trigger: ATGTGTTGTTGATGGTGGCCAAGCTGGACCCGGACT...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATAATCTCGGTGCTGGCCTaGGAGCCACAAGGAGTCCTA +
Preference number: 4 (lower is better)
Translates to: CPPLADPAKEVGVWGFRIISVLA*EPQGVL
Trigger: TAGGACTCCTTGTGGCTCCCAGGCCAGCACCGAGAT...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGTTTCCACCGTGTTTGTaGGCTCTGCTCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGFPPCL*ALLPPS
Trigger: AGAAGGAGGGAGCAGAGCCCACAAACACGGTGGAAA...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGTTTCTCCCAGGGATTTaGGGCCTTACGTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLEFLPGI*GLTCFP
Trigger: AGGGAAGCACGTAAGGCCCCAAATCCCTGGGAGAAA...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATTGTGCTCACCTCCTTTaGGGCTTCACAGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHCAHLL*GFTALL
Trigger: GAGAAGGGCTGTGAAGCCCCAAAGGAGGTGAGCACA...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGGCCAGGTCCTCGACCTaGTCCAGCTCAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSARSST*SSSGGL
Trigger: CAACCCTCCTGAGCTGGACCAGGTCGAGGACCTGGC...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGCTCTGGTCTCTCCGCTaGTTCAGCAGCGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLLWSLR*FSSAQY
Trigger: ATACTGGGCGCTGCTGAACCAGCGGAGAGACCAGAG...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGTTTATCTTCAGGCTTaGACCACACGCCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWVYLQA*TTRPCQ
Trigger: TTGGCATGGGCGTGTGGTCCAAGCCTGAAGATAAAC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGGTTCTGGAAGCCTaGAGAGTCCACCACCATGAT +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSGVLEA*RVHHHD
Trigger: ATCATGGTGGTGGACTCTCCAGGCTTCCAGAACCCC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATACAGCTCCTCAAAGGTaGCCGCCCGGTCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDTAPQR*PPGPCP
Trigger: AGGGCAAGGACCGGGCGGCCACCTTTGAGGAGCTGT...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCGATATCGCTGTAGCGTaGAGACAAAGGTCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIDIAVA*RQRSAG
Trigger: ACCAGCGGACCTTTGTCTCCACGCTACAGCGATATC...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CTCCGAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTGGAGCCCTCTACATaGACTTCCTCATCTAAGACC +
Preference number: 4 (lower is better)
Translates to: LRGRSVGDNSMSLGVVGELEPST*TSSSKT
Trigger: GGTCTTAGATGAGGAAGTCCATGTAGAGGGCTCCAG...CTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCATCCCATCCCAACTGGTaGAAAATCTCACACTGGAGG +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPSHPNW*KISHWR
Trigger: CCTCCAGTGTGAGATTTTCCACCAGTTGGGATGGGA...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGGTCCCATCCCAACTaGTGGAAAATCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLEGSHPN*WKISHW
Trigger: CCAGTGTGAGATTTTCCACCAGTTGGGATGGGACCC...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTTTTGGTACCAGGCAGTaGATAAAGTGCAGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAFGTRQ*IKCSRD
Trigger: GTCCCGGCTGCACTTTATCCACTGCCTGGTACCAAA...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCACATCAAAGTCCCGATaGCCAATCTGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGTSKSR*PIWSQR
Trigger: CCTCTGTGACCAGATTGGCCATCGGGACTTTGATGT...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCACATCAAAGTCCCGATaGCCAATCTGGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLTSKSR*PIWSQR
Trigger: CCTCTGTGACCAGATTGGCCATCGGGACTTTGATGT...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATAGGCCTCCTCACACTTaGCTTCACTCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHRPPHT*LHSAPA
Trigger: AGCTGGAGCAGAGTGAAGCCAAGTGTGAGGAGGCCT...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGGTCTCCAGGTCTGTCTaGAGGGTTTGCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMVSRSV*RVCLTA
Trigger: AGCAGTGAGGCAAACCCTCCAGACAGACCTGGAGAC...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCGGCAATCCGCCGAATaGATGTCTCCAGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHRQSAE*MSPGLS
Trigger: AGACAGACCTGGAGACATCCATTCGGCGGATTGCCG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAATCCACTGCCGTCTaGACACTCTCAGTATCACTG +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAQSTAV*TLSVSL
Trigger: CAGTGATACTGAGAGTGTCCAGACGGCAGTGGATTG...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGCCTGAGGTCTTGCTGTaGACATTGGTGGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLPEVLL*TLVDRA
Trigger: AGCCCGGTCCACCAATGTCCACAGCAAGACCTCAGG...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGCCGGCGGACAAAGTaGGGAGAAACAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLCRRTK*GETGLS
Trigger: AGACAAGCCTGTTTCTCCCCACTTTGTCCGCCGGCA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATCCTCTAGGCCCAGCGTaGACCCCTGGCCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNPLGPA*TPGLSG
Trigger: CCCAGAGAGGCCAGGGGTCCACGCTGGGCCTAGAGG...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCAGTCGTCTGGTAAATaGGGAGAGTGGGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMQSSGK*GEWASP
Trigger: AGGACTGGCCCACTCTCCCCATTTACCAGACGACTG...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCAGTCGTCTGGTAAATaGGGAGAGTGGGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHQSSGK*GEWASP
Trigger: AGGACTGGCCCACTCTCCCCATTTACCAGACGACTG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTCCCCATGCTCGGTCTaGATTCTAAGAGGGACTCGC +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSSPCSV*ILRGTR
Trigger: GCGAGTCCCTCTTAGAATCCAGACCGAGCATGGGGA...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATTCCCCATGCTCGGTCTaGATTCTAAGAGGGACTCGC +
Preference number: 4 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHSPCSV*ILRGTR
Trigger: GCGAGTCCCTCTTAGAATCCAGACCGAGCATGGGGA...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGACAACAGCATGTCCCTaGGTGTGGTCGGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMTTACP*VWSESS
Trigger: TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGT...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTCGTAGTCGAGGCTTaGGAGTTTCCAGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSFVVEA*EFPAEW
Trigger: CCATTCAGCTGGAAACTCCCAAGCCTCGACTACGAA...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGGCTTGGGTGGCCATGCTGGCTaGCTCTGGCCACCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LQVIVESGSLQGQLQGGLGGHAG*LWPPGR
Trigger: CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACC...CAAGCCTCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCTCACAGCTCCTGAACTaGTTCCTACTTCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGSQLLN*FLLLEV
Trigger: TACCTCCAGAAGTAGGAACCAGTTCAGGAGCTGTGA...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR TCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCGTGAGATGATGAGATaGGATGGAGCTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLREMMR*DGASCQ
Trigger: CTGGCAGGAAGCTCCATCTCATCTCATCATCTCACG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACGTAAATCCATCCTTCTaGGCCAGCCAGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHVNPSF*ASQTFS
Trigger: AGAGAAAGTCTGGCTGGCTCAGAAGGATGGATTTAC...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACCTCATCCACCTCAGTaGTGGTTTTGTCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSPHPPQ*WFCQHQ
Trigger: TTGATGCTGACAAAACCATCACTGAGGTGGATGAGG...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCCCACTCAAACCTCATaGACTGCTTCCGACCCACTT +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMPTQTS*TASDPL
Trigger: AAGTGGGTCGGAAGCAGTTCATGAGGTTTGAGTGGG...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATACGTCATTTGCTGGATaGTCTGTCGAAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHTSFAG*SVEGGA
Trigger: AGCACCACCTTCGACAGATCATCCAGCAAATGACGT...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGTCATCTTGAGCCCTaGGCTGGTTTCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLCHLEP*AGFLIL
Trigger: GAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGATCTGTTGATGAGTaGGACCACAGCCGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSGSVDE*DHSRKE
Trigger: CTCTTTGCGGCTGTGGTCTCACTCATCAACAGATCC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCGCAGCCGGGACCTTTTaGTCATGCTGGTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKAAAGTF*SCWSAH
Trigger: ATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGC...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCACCTCGGAGGTCGACATaGGCTTCTTCAGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPPRRST*ASSGVE
Trigger: CTCCACTCCTGAAGAAGCTCATGTCGACCTCCGAGG...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCGAATCTTCAGCTTCTTaGATTCCTGGCGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGESSAS*IPGETE
Trigger: TTCTGTCTCGCCAGGAATTCAAGAAGCTGAAGATTC...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGCGCTTCTGGCAGGACTaGCGGACATCCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSRFWQD*RTSSSS
Trigger: GGAACTGGAGGATGTCCGTCAGTCCTGCCAGAAGCG...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTAAGGAGCTGCACGTCTaGCAACAGTGCATGTGTCCT +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSKELHV*QQCMCP
Trigger: AGGACACATGCACTGTTGTCAGACGTGCAGCTCCTT...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCAAGGAGCTGCACGTCTaGCAACAGTGCATGTGTCCT +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLKELHV*QQCMCP
Trigger: AGGACACATGCACTGTTGTCAGACGTGCAGCTCCTT...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGCTGTCAGCACTTTTaGAGGACACGATGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLCCQHF*RTRWSR
Trigger: CCGGCTCCATCGTGTCCTTCAAAAGTGCTGACAGCA...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCAGCTTCAAGGAGGCTaGACTGGTTCCTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLQLQGG*TGSYFW
Trigger: CCAGAAGTAGGAACCAGTTCAGCCTCCTTGAAGCTG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCAGATCTGGTGCCACTaGTGGACTTGCTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHQIWCH*WTCCWV
Trigger: AACCCAACAGCAAGTCCAGCAGTGGCACCAGATCTG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCCAGATCTGGTGCCACTaGTGGACTTGCTGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGQIWCH*WTCCWV
Trigger: AACCCAACAGCAAGTCCAGCAGTGGCACCAGATCTG...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGGGCTTCCAGATCTGGTaGCACTGCTGGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLGFQIW*HCWTCC
Trigger: ACAGCAAGTCCAGCAGTGGCACCAGATCTGGAAGCC...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATTGCTCCCTCCTTCTCTaGTTTCCCTGGTCGCACCCC +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDCSLLL*FPWSHP
Trigger: GGGGTGCGACCAGGGAAAGCAGAGAAGGAGGGAGCA...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGATCCCAGGACTCACCTaGCTTCCCAGTCGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSIPGLT*LPSRAP
Trigger: CGGAGCACGACTGGGAAGGCAGGTGAGTCCTGGGAT...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCGACTTACCCTGGGGTTaGCCCATCTTTTCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLDLPWG*PIFSFL
Trigger: TAAGAAGGAAAAGATGGGGCAACCCCAGGGTAAGTC...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCGACTTACCCTGGGGTTaGCCCATCTTTTCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFDLPWG*PIFSFL
Trigger: TAAGAAGGAAAAGATGGGGCAACCCCAGGGTAAGTC...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGCAGCCAGACTTTCTCTaGCTCATACCATCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLQPDFL*LIPSVL
Trigger: GAGGACAGATGGTATGAGGCAGAGAAAGTCTGGCTG...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTCAGCCAGACTTTCTCTaGCTCATACCATCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAQPDFL*LIPSVL
Trigger: GAGGACAGATGGTATGAGGCAGAGAAAGTCTGGCTG...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGCCAGTATGCCCGCTGTaGCATGGAGCCAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSPVCPL*HGANVG
Trigger: GCCCACATTGGCTCCATGGCACAGCGGGCATACTGG...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATCTTTCCCCTTCCGGCTaGCGTGCCACGCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNLSPSG*RATRLF
Trigger: GAAGAGCCGCGTGGCACGGCAGCCGGAAGGGGAAAG...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCACTCAGCTGCGTAGTTTaGCCACTCAAACCTCATGAA +
Preference number: 4 (lower is better)
Translates to: VDRALLSANADWVLSVSPLSCVV*PLKPHE
Trigger: TTCATGAGGTTTGAGTGGGCAAACTACGCAGCTGAG...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCAGCCCAGGGCCTCAGCTaGGTAGTTTGCCCACTCAAA +
Preference number: 4 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPAQGLS*VVCPLK
Trigger: TTTGAGTGGGCAAACTACGCAGCTGAGGCCCTGGGC...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGGCCCAAACGTCATTTaGTGGATGATCTGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLGPNVI*WMICRR
Trigger: CCTTCGACAGATCATCCAGCAAATGACGTTTGGGCC...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATGGCCGCCCGGTCCTTaGCCTGGTGCCGGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGWPPGP*PGAGGS
Trigger: AGAACCCCCGGCACCAGGGCAAGGACCGGGCGGCCA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGAGGCAGTGGATAAAGTaGAGCCGGGACCTTTTGATC +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLRQWIK*SRDLLI
Trigger: GATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCT...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATAGGCAGTGGATAAAGTaGAGCCGGGACCTTTTGATC +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHRQWIK*SRDLLI
Trigger: GATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCT...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGGGTGGTGGAGATTCCTaGCCACTCCTGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVGGGDS*PLLLST
Trigger: GGTGGAAAGCAGGAGTGGGCAGGAATCTCCACCACC...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCCTGGAAGAGAACGATaGTCTGAGATACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHPGRER*SEIPAS
Trigger: AGAAGCTGGTATCTCAGAGCATCGTTCTCTTCCAGG...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATTGGCCAGTCCTTGACTaGGAGGAACACAGCCACATT +
Preference number: 4 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHWPVLD*EEHSHI
Trigger: AATGTGGCTGTGTTCCTCGCAGTCAAGGACTGGCCA...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTCTGGACTTGTTCATaGTTGCTCTTGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSFWTCS*LLLSSW
Trigger: CCAGGAGCTCAAGAGCAAGCATGAACAAGTCCAGAA...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCTCTCCTCGCATTGCTaGAGACGCTTTCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHLSSHC*RRFLRN
Trigger: GTTCCTCAGAAAGCGTCTGCAGCAATGCGAGGAGAG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGTAGCATCTCCACCTaGTGCTTCAGCTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLCSIST*CFSCEA
Trigger: AGCCTCACAGCTGAAGCAGCAGGTGGAGATGCTACA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGCAATGAGGTCCTTGTaGTTCTGCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: QANHTGSPASPQDMPLWAAMRSL*FCISSF
Trigger: GAATGAGCTGATGCAGAAGCACAAGGACCTCATTGC...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCGCAATGAGGTCCTTGTaGTTCTGCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLAMRSL*FCISSF
Trigger: GAATGAGCTGATGCAGAAGCACAAGGACCTCATTGC...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAGCAATGAGGTCCTTGTaGTTCTGCATCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: VDRALLSANADWVLSVSPAMRSL*FCISSF
Trigger: GAATGAGCTGATGCAGAAGCACAAGGACCTCATTGC...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCTGCAGTTCTTGGATCTaGCCAATGTCAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGCSSWI*PMSAAD
Trigger: GTCTGCTGCTGACATTGGGCAGATCCAAGAACTGCA...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCGAGGGTTTGCCTCACTaGTGCAAGTTCCTCCACGTA +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLEGLPH*CKFLHV
Trigger: TACGTGGAGGAACTTGCAGCAGTGAGGCAAACCCTC...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGTCTCCTGAGGTCTTaGTGTGGACATTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLCLLRS*CGHWWT
Trigger: GGTCCACCAATGTCCACAGCAAGACCTCAGGAGACA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTGTCTCCTGAGGTCTTaGTGTGGACATTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMCLLRS*CGHWWT
Trigger: GGTCCACCAATGTCCACAGCAAGACCTCAGGAGACA...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGTCCAACTTGGCCCTTTaGATGTCTGTGATCCCACCA +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLSNLAL*MSVIPP
Trigger: TGGTGGGATCACAGACATGCAAAGGGCCAAGTTGGA...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CCA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGCTGATGGAAATTTCTaGGATCTCTCGTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPADGNF*DLSFWR
Trigger: TCTCCAGAACGAGAGATCCCAGAAATTTCCATCAGC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCGCTGGCTTCCAGATCTaGTGCCACTGCTGGACTTGC +
Preference number: 4 (lower is better)
Translates to: DALQEVRLLKLQPVQLLIAGFQI*CHCWTC
Trigger: GCAAGTCCAGCAGTGGCACCAGATCTGGAAGCCAGC...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGAGTCCGGGTCCAGCTTaGCCACCATCAACAACACAT +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMSPGPA*PPSTTH
Trigger: ATGTGTTGTTGATGGTGGCCAAGCTGGACCCGGACT...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATCCAGAGCAGGCTGGCTaGGTCCTTCCAGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDPEQAG*VLPALS
Trigger: AGACAGAGCTGGAAGGACCCAGCCAGCCTGCTCTGG...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGATGATCTGTCGAAGGTaGTGCTTGAAGGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMMICRR*CLKVAV
Trigger: CACGGCCACCTTCAAGCACCACCTTCGACAGATCAT...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGGAGCCCTCTACATaGACTTCCTCATCTAAGACC +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGLEPST*TSSSKT
Trigger: GGTCTTAGATGAGGAAGTCCATGTAGAGGGCTCCAG...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATGGGTCCCATCCCAACTaGTGGAAAATCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHGSHPN*WKISHW
Trigger: CCAGTGTGAGATTTTCCACCAGTTGGGATGGGACCC...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTTCCACCACAGGGTTTaGTACCAGGCAGTGGATAAA +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLFHHRV*YQAVDK
Trigger: TTTATCCACTGCCTGGTACCAAACCCTGTGGTGGAA...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGAGCTTCTTGAATTCCTaGCGAGACAGAAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWSFLNS*RDRKPL
Trigger: CAAGGGCTTTCTGTCTCGCCAGGAATTCAAGAAGCT...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCAAGCAGCTGCCACCATaGCCAGTCCTTGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKAKQLPP*PVLDCE
Trigger: CTCGCAGTCAAGGACTGGCCATGGTGGCAGCTGCTT...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGAAGCAGCTGCCACCATaGCCAGTCCTTGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVKQLPP*PVLDCE
Trigger: CTCGCAGTCAAGGACTGGCCATGGTGGCAGCTGCTT...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGGCACTAAGTAGAGGCTaGAGGGAACCAAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLALSRG*REPSSC
Trigger: GCAGCTGCTTGGTTCCCTCCAGCCTCTACTTAGTGC...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCTTGCTCTTGAGCTCCTaGACCTCCCGGAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: DALQEVRLLKLQPVQLLILLLSS*TSRKAC
Trigger: ACAGGCCTTCCGGGAGGTCCAGGAGCTCAAGAGCAA...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACAGGTAAGATGGTaGCACTTCCTCTTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGSQVRW*HFLFSW
Trigger: CCAACTGAAGAGGAAGTGCCACCATCTTACCTGTGA...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTCACAGGTAAGATGGTaGCACTTCCTCTTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHSQVRW*HFLFSW
Trigger: CCAACTGAAGAGGAAGTGCCACCATCTTACCTGTGA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAAGGTCACAGGTAAGATaGTGGCACTTCCTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSRSQVR*WHFLFS
Trigger: ACTGAAGAGGAAGTGCCACCATCTTACCTGTGACCT...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGAGCAGCTCCCGTTTATaGTCCTGTAGCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMSSSRL*SCSIST
Trigger: GGTGGAGATGCTACAGGACCATAAACGGGAGCTGCT...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTCACTCTGCTCCAGCTaGCTGTGCACTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLSLCSS*LCTFSS
Trigger: GCTGGAGAAAGTGCACAGCCAGCTGGAGCAGAGTGA...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCATTCAGGTCATCCTaGTCCTCATCGATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLISFRSS*SSSMRF
Trigger: GAAGCGCATCGATGAGGACCAGGATGACCTGAATGA...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGTGCAGCTGCAGTTCTTaGATCTGCCCAATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGCSCSS*ICPMSA
Trigger: TGCTGACATTGGGCAGATCCAAGAACTGCAGCTGCA...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATATGGCTCGATCCACGGTaGACTGTTCCAGGTACTCGA +
Preference number: 4 (lower is better)
Translates to: CPPLADPAKEVGVWGFRIWLDPR*TVPGTR
Trigger: TCGAGTACCTGGAACAGTCCACCGTGGATCGAGCCA...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACAGTATCACTGTCACTaGATGCCACTTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPQYHCH*MPLLPR
Trigger: CCTTGGAAGAAGTGGCATCCAGTGACAGTGATACTG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATGGATGCGGCTGCTGGTaGCTGACTGTCGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDGCGCW*LTVEKE
Trigger: CTCCTTCTCGACAGTCAGCCACCAGCAGCCGCATCC...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTCGCAGGAACTGAATTaGGTTTTCGACTTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHSQELN*VFDFSG
Trigger: CCCCGAAAAGTCGAAAACCCAATTCAGTTCCTGCGA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCCTTTCTTCTCGAAAGCAGCACACAGACGCTCGAGCACCACACTGTCACTGGTCCGAGGACGCAGTGTaGGCGACAACAGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: LLSSRKQHTDARAPHCHWSEDAV*ATTACP
Trigger: GGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGA...CCAGTGACAGTGTGGTGCTCGAGCGTCTGTGTGCTGCTTTCGAGAAGAAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATGCAAACTGGCGGTTCTaGAAAACAAGCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHANWRF*KTSGSF
Trigger: AAAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGC...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATATCAGGTGGGCAAACTaGCGGTTCTGGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHIRWAN*RFWKTS
Trigger: GCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGAT...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTTCGTAGTCGAGGCTTaGGAGTTTCCAGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHFVVEA*EFPAEW
Trigger: CCATTCAGCTGGAAACTCCCAAGCCTCGACTACGAA...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCCATCGAAGTCCACTTTaGTCTTGCGTTCGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGHRSPL*SCVRSR
Trigger: TCGACTACGAACGCAAGACCAAAGTGGACTTCGATG...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGGGGCTTCCGGATAGCTaGGAGGAAGTCATCGAAGTC +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLGLPDS*EEVIEV
Trigger: GACTTCGATGACTTCCTCCCAGCTATCCGGAAGCCC...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACAAGTCGTGGGATTCCTaGTCGACTTTTGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHKSWDS*STFDAV
Trigger: GACAGCATCAAAAGTCGACCAGGAATCCCACGACTT...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGTCACCCGCAAGTCGTaGGATTCCTGGTCGACTTTT +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSVTRKS*DSWSTF
Trigger: AAAAGTCGACCAGGAATCCCACGACTTGCGGGTGAC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGGTCACCCGCAAGTCGTaGGATTCCTGGTCGACTTTT +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMVTRKS*DSWSTF
Trigger: AAAAGTCGACCAGGAATCCCACGACTTGCGGGTGAC...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTCACCCGCAAGTCGTaGGATTCCTGGTCGACTTTT +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHVTRKS*DSWSTF
Trigger: AAAAGTCGACCAGGAATCCCACGACTTGCGGGTGAC...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCTCAAGGAGGCTGAACTaGTTCCTACTTCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFSRRLN*FLLLEV
Trigger: TACCTCCAGAAGTAGGAACCAGTTCAGCCTCCTTGA...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 72 bp CGCTCACTCTCCAGCACCTGGCAGGCCACATCACCTTaGAAGCGCTCATCGGCAAGGTCAGAGGTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: RSLSSTWQATSP*KRSSARSEVKS
Trigger: TGACTTGACCTCTGACCTTGCCGATGAGCGCTTCAAAGGTGATGTGGCCTGCCAGGTGCTGGAGAGTGAGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 72 bp TGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTTaGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WMLERCEPSCPP*ADPAKEVGVWG
Trigger: GCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTCCTCATCCACCTCAGTaGTGGTTTTGTCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAPHPPQ*WFCQHQ
Trigger: TTGATGCTGACAAAACCATCACTGAGGTGGATGAGG...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGCCCACTCAAACCTCATaGACTGCTTCCGACCCACTT +
Preference number: 4 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRPTQTS*TASDPL
Trigger: AAGTGGGTCGGAAGCAGTTCATGAGGTTTGAGTGGG...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGTGTCATCTTGAGCCCTaGGCTGGTTTCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRCHLEP*AGFLIL
Trigger: GAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACA...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGGGAACACCTTCCTCTTaGTATCGCTGTAGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLGTPSS*YRCSVE
Trigger: CTCCACGCTACAGCGATATCAAGAGGAAGGTGTTCC...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGGGAACACCTTCCTCTTaGTATCGCTGTAGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRGTPSS*YRCSVE
Trigger: CTCCACGCTACAGCGATATCAAGAGGAAGGTGTTCC...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCCTTTCTTCTCGAAAGCAGCACACAGACGCTCGAGCACCACACTGTCACTGGCAGCTCCTCTCTTTTTaGCTGGTGCAGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: LLSSRKQHTDARAPHCHWQLLSF*LVQDLG
Trigger: CCCCAGGTCCTGCACCAGTCAAAAAGAGAGGAGCTG...CCAGTGACAGTGTGGTGCTCGAGCGTCTGTGTGCTGCTTTCGAGAAGAAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATGCAGCCGGGACCTTTTaGTCATGCTGGTCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDAAGTF*SCWSAH
Trigger: ATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGC...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGAAGAGAACGATGCTCTaGGATACCAGCTTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMKRTML*DTSFSR
Trigger: GCGAGAGAAGCTGGTATCTCAGAGCATCGTTCTCTT...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGAATCTTCAGCTTCTTaGATTCCTGGCGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWESSAS*IPGETE
Trigger: TTCTGTCTCGCCAGGAATTCAAGAAGCTGAAGATTC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATTCTCCAGGTCCGCTGTaGGCACCTTCTGCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDSPGPL*APSASS
Trigger: TGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGA...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGTACTCGATGCGCATCTaGGCCACCTGCAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRYSMRI*ATCSCS
Trigger: AGAACAACTGCAGGTGGCTCAGATGCGCATCGAGTA...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACCGCCTCCTGCCTGCTaGCGATGGCTCGATCCACGG +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASPPPAC*RWLDPR
Trigger: CCGTGGATCGAGCCATCGTCAGCAGGCAGGAGGCGG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCTGAAGAGATGCATTTaGGGCTGGTGGACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHLKRCI*GWWTSR
Trigger: TCTTGAGGTCCACCAGCCTCAAATGCATCTCTTCAG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR TCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCTGAAGAGATGCATTTaGGGCTGGTGGACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLLKRCI*GWWTSR
Trigger: TCTTGAGGTCCACCAGCCTCAAATGCATCTCTTCAG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR TCA 90 bp GCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCACCAGGCTCTTGTTCCGCGCCCCCAACACCGTCTaGAGAGATGCATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: AFSNCSLYSCSSTRLLFRAPNTV*RDAFEA
Trigger: AGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGC...GCGGAACAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGGGACTCGCAGGAACTaGATTGGGTTTTCGACTTTT +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLGTRRN*IGFSTF
Trigger: AAAAGTCGAAAACCCAATTCAGTTCCTGCGAGTCCC...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR TCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATGACGAGTCAGACAGGTaGGCGGGATCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNDESDR*AGSSLG
Trigger: GCCCAAGGAGGATCCCGCTCACCTGTCTGACTCGTC...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGCAGCTTCAAGGAGGCTaGACTGGTTCCTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLQLQGG*TGSYFW
Trigger: CCAGAAGTAGGAACCAGTTCAGCCTCCTTGAAGCTG...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGGACACAGAACTTCTaGAAAGAGGACACAGATCAC +
Preference number: 4 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGWTQNF*KEDTDH
Trigger: GTGATCTGTGTCCTCTTTGCAGAAGTTCTGTGTCCA...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATGGGCCAAGATCTCGGTaGTGGCCTGGGAGCCACAAG +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNGPRSR*WPGSHK
Trigger: CTTGTGGCTCCCAGGCCAGCACCGAGATCTTGGCCC...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGACTTACCCTGGGGTTaGCCCATCTTTTCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGDLPWG*PIFSFL
Trigger: TAAGAAGGAAAAGATGGGGCAACCCCAGGGTAAGTC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTATCCGAGGCCTTTCTaGATCCTTCTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLYPRPF*ILLQSR
Trigger: CCTGCTCTGGAGAAGGATGCAGAAAGGCCTCGGATA...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCCCTTTGCCCTCCTCCTaGGGGGCTGGCCCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LGWFYSNSPTPICTPSTLPLPSS*GAGPSW
Trigger: CCAAGACGGGCCAGCCCCGCAGGAGGAGGGCAAAGG...GAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACCTTTGCCCTCCTCCTaGGGGGCTGGCCCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASPLPSS*GAGPSW
Trigger: CCAAGACGGGCCAGCCCCGCAGGAGGAGGGCAAAGG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCAAGTCTCACCCTTCCTaGTGGCAGGTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKAKSHPS*WQVCCS
Trigger: GGAACAGCAGACCTGCCAGCAGGAAGGGTGAGACTT...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCTTGGCCCGATGGACATaGTCCTCATCCACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: DALQEVRLLKLQPVQLLILARWT*SSSTSV
Trigger: CACTGAGGTGGATGAGGAGCATGTCCATCGGGCCAA...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGCCATGCCAAAGGAGCTaGTATCTGCCATCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLPCQRS*YLPSGA
Trigger: TGCACCAGATGGCAGATAGCAGCTCCTTTGGCATGG...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCAAACCTCATGAACTaGTTCCGACCCACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLISNLMN*FRPTLQ
Trigger: CTGCAAAGTGGGTCGGAAGCAGTTCATGAGGTTTGA...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGCTCAGCTGCGTAGTTTaGCCACTCAAACCTCATGAA +
Preference number: 4 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLLSCVV*PLKPHE
Trigger: TTCATGAGGTTTGAGTGGGCAAACTACGCAGCTGAG...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GTAAGCGGACCTGAGAGGGATTTTGATCCACAACAGCCACGGTGGTCCCTGGGGCTCTCCTCGCATTGCTaGAGACGCTTTCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: VSGPERDFDPQQPRWSLGLSSHC*RRFLRN
Trigger: GTTCCTCAGAAAGCGTCTGCAGCAATGCGAGGAGAG...CCCCAGGGACCACCGTGGCTGTTGTGGATCAAAATCCCTCTCAGGTCCGCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCAGCCTCTCCTCGCATTaGTGCAGACGCTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKASLSSH*CRRFLR
Trigger: CCTCAGAAAGCGTCTGCAGCAATGCGAGGAGAGGCT...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTCATGGAGGACCATCTaGTTCTCTTCATACTCTTGC +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWSWRTI*FSSYSC
Trigger: GCAAGAGTATGAAGAGAAGCAGATGGTCCTCCATGA...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGAAGCCTTCCAAATCTTaGTTCTCATGGAGGACCATC +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWKPSKS*FSWRTI
Trigger: GATGGTCCTCCATGAGAAGCAAGATTTGGAAGGCTT...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTCCTGGTCCTCATCGATaGGCTTCAGGAGGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPPGPHR*ASGGPP
Trigger: AGGCGGACCTCCTGAAGCGCATCGATGAGGACCAGG...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCAGGTCCTTGTGCTTCTaGATCAGCTCATTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIRSLCF*ISSFRS
Trigger: TGACCTGAATGAGCTGATGCAGAAGCACAAGGACCT...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTGCAGTTCTTGGATCTaGCCAATGTCAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMCSSWI*PMSAAD
Trigger: GTCTGCTGCTGACATTGGGCAGATCCAAGAACTGCA...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTGTTCTTGTAGCTTGTaGTTCTCCTTCTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLCSCSL*FSFLAS
Trigger: GGAAGCCAAGAAGGAGAAGCACAAGCTACAAGAACA...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGTCTGTCTGGAGGGTTTaGCTCACTGCTGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRSVWRV*LTAASS
Trigger: GGAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGA...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCAGTCCACTTTGGTCTTaGGTTCGTAGTCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGSPLWS*VRSRGL
Trigger: CAAGCCTCGACTACGAACGCAAGACCAAAGTGGACT...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTAGTCCACTTTGGTCTTaGGTTCGTAGTCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSSPLWS*VRSRGL
Trigger: CAAGCCTCGACTACGAACGCAAGACCAAAGTGGACT...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTCCGTTTCAAAGTGGATaGTTGAACGCTGTGAACCGT +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAPFQSG*LNAVNR
Trigger: ACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGG...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCTTAATGAAGCCCCCTaGGATGACAGAGAAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLILNEAP*DDREKR
Trigger: CCTCTTTTCTCTGTCATCCCAGGGGGCTTCATTAAG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGACTTGCTGTTGGGTTaGCTGATGGAAATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGDLLLG*LMEISG
Trigger: CCCAGAAATTTCCATCAGCCAACCCAACAGCAAGTC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATATTTCCACCGTGTTTGTaGGCTCTGCTCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CPPLADPAKEVGVWGFRIFPPCL*ALLPPS
Trigger: AGAAGGAGGGAGCAGAGCCCACAAACACGGTGGAAA...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCCAAACGTCATTTGCTaGATGATCTGTCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGPNVIC*MICRRW
Trigger: CCACCTTCGACAGATCATCCAGCAAATGACGTTTGG...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCCAAACGTCATTTGCTaGATGATCTGTCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGPNVIC*MICRRW
Trigger: CCACCTTCGACAGATCATCCAGCAAATGACGTTTGG...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGCCCGGTCCTTGCCCTaGTGCCGGGGGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRARSLP*CRGFWK
Trigger: CTTCCAGAACCCCCGGCACCAGGGCAAGGACCGGGC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTCCACAACAGCCACGGTaGTCCCTGGGGAGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSPQQPR*SLGRGP
Trigger: CGGACCCCTCCCCAGGGACCACCGTGGCTGTTGTGG...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCTGGAGCCCTCTACATaGACTTCCTCATCTAAGACC +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSLEPST*TSSSKT
Trigger: GGTCTTAGATGAGGAAGTCCATGTAGAGGGCTCCAG...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTCCCATCCCAACTGGTaGAAAATCTCACACTGGAGG +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMSHPNW*KISHWR
Trigger: CCTCCAGTGTGAGATTTTCCACCAGTTGGGATGGGA...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCTCCCATCCCAACTGGTaGAAAATCTCACACTGGAGG +
Preference number: 4 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGSHPNW*KISHWR
Trigger: CCTCCAGTGTGAGATTTTCCACCAGTTGGGATGGGA...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTCCTCTCTTTTTGACTaGTGCAGGACCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLSSLFD*CRTWGA
Trigger: TGCACCCCAGGTCCTGCACCAGTCAAAAAGAGAGGA...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GTAAGCGGACCTGAGAGGGATTTTGATCCACAACAGCCACGGTGGTCCCTGGGGTCCTCTCTTTTTGACTaGTGCAGGACCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: VSGPERDFDPQQPRWSLGSSLFD*CRTWGA
Trigger: TGCACCCCAGGTCCTGCACCAGTCAAAAAGAGAGGA...CCCCAGGGACCACCGTGGCTGTTGTGGATCAAAATCCCTCTCAGGTCCGCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCATGCTGGTCAGAGGCTGCGGTGGTGGTaGAGATTCCTGCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: WYQAVDKVQPGPFDHAGQRLRWW*RFLPTP
Trigger: AGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCT...CTGACCAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCGAGCTTCTTCAGGAGTaGAGCGTCCAGCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: DALQEVRLLKLQPVQLLIELLQE*SVQHLE
Trigger: TTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTC...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGACAGCCACATTCTTCTaGATGCACTGTGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMTATFF*MHCAAS
Trigger: ACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGT...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCACAGCCACATTCTTCTaGATGCACTGTGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLTATFF*MHCAAS
Trigger: ACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGT...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCAAGGTCACAGGTAAGATaGTGGCACTTCCTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: EDAVWATTACPWVWSESSRSQVR*WHFLFS
Trigger: ACTGAAGAGGAAGTGCCACCATCTTACCTGTGACCT...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ACAGCCACATTCTTCTGGATGCACTGTGCAGCCAGTCGGCGAATCTTCAGCTTCGACTCACCTAGGGCCTaGGCCAGCTGCAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: TATFFWMHCAASRRIFSFDSPRA*ASCRSN
Trigger: GTTTGACCTGCAGCTGGCCCAGGCCCTAGGTGAGTC...GAAGCTGAAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGATGGTGTTTTCCTGCTaGCTCTGGATTTTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWMVFSC*LWIFCC
Trigger: GCAACAGAAAATCCAGAGCCAGCAGGAAAACACCAT...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAATGGTGTTTTCCTGCTaGCTCTGGATTTTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPMVFSC*LWIFCC
Trigger: GCAACAGAAAATCCAGAGCCAGCAGGAAAACACCAT...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCTCATTCAGGTCATCCTaGTCCTCATCGATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGSFRSS*SSSMRF
Trigger: GAAGCGCATCGATGAGGACCAGGATGACCTGAATGA...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATGCTGGGACTCGGAGGTaGCCGCCTGTGAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNAGTRR*PPVKAP
Trigger: AGGAGCTTTCACAGGCGGCCACCTCCGAGTCCCAGC...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGCCTCTAGGCCCAGCGTaGACCCCTGGCCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRPLGPA*TPGLSG
Trigger: CCCAGAGAGGCCAGGGGTCCACGCTGGGCCTAGAGG...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTCGCAGGAACTGAATTaGGTTTTCGACTTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHSQELN*VFDFSG
Trigger: CCCCGAAAAGTCGAAAACCCAATTCAGTTCCTGCGA...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTTCGCAGGAACTGAATTaGGTTTTCGACTTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHASQELN*VFDFSG
Trigger: CCCCGAAAAGTCGAAAACCCAATTCAGTTCCTGCGA...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCATCGAAGTCCACTTTaGTCTTGCGTTCGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIHRSPL*SCVRSR
Trigger: TCGACTACGAACGCAAGACCAAAGTGGACTTCGATG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCCTTTCTTCTCGAAAGCAGCACACAGACGCTCGAGCACCACACTGTCACTGGCGTCTTGCCCACCTTTaGCTGATCCAGCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLSSRKQHTDARAPHCHWRLAHL*LIQPRR
Trigger: CCTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACG...CCAGTGACAGTGTGGTGCTCGAGCGTCTGTGTGCTGCTTTCGAGAAGAAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCTCAAGGAGGCTGAACTaGTTCCTACTTCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: QHPRRICLCGLISPLEGGSRRLN*FLLLEV
Trigger: TACCTCCAGAAGTAGGAACCAGTTCAGCCTCCTTGA...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTCATGCTGGCTGGCTCTaGCCACCGGGGAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPHAGWL*PPGRPG
Trigger: GCCAGGCCTCCCCGGTGGCCAGAGCCAGCCAGCATG...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
3UTR CAA 72 bp TGGAGGGAACCAAGCAGCTGCCACCATGGCCAGTCCTaGACTGCGAGGAACACAGCCACATTCTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: WREPSSCHHGQS*TARNTATFFWM
Trigger: CATCCAGAAGAATGTGGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGTGGCAGCTGCTTGGTTCCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 72 bp GTGAGCACCTTCTGCGTCTTCAAGGCCTCCTCACACTaGGCTTCACTCTGCTCCAGCTGGCTGTGCACTTTC +
Preference number: 4 (lower is better)
Translates to: VSTFCVFKASSH*ASLCSSWLCTF
Trigger: GAAAGTGCACAGCCAGCTGGAGCAGAGTGAAGCCAAGTGTGAGGAGGCCTTGAAGACGCAGAAGGTGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 72 bp CCGCCGAATGGATGTCTCCAGGTCTGTCTGGAGGGTTaGCCTCACTGCTGCAAGTTCCTCCACGTACTTCTC +
Preference number: 4 (lower is better)
Translates to: PPNGCLQVCLEG*PHCCKFLHVLL
Trigger: GAGAAGTACGTGGAGGAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGACCTGGAGACATCCATTCGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTGTCGAAGGTGGTGCTTaGAGGTGGCCGTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPVEGGA*RWPCSA
Trigger: AGCTGAACACGGCCACCTTCAAGCACCACCTTCGAC...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATGAGAGTCCACCACCATaGTGGAGGCCATGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDESPPP*WRPWRD
Trigger: ATCTCTCCATGGCCTCCATCATGGTGGTGGACTCTC...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp TTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCGCCGGCGGAAGCGAGTaGGCCCCATGTGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LGWFYSNSPTPICTPSTLAGGSE*APCGQH
Trigger: ATGCTGACCACATGGGGCTCACTCGCTTCCGCCGGC...GAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCGAATCTTCAGCTTCTTaGATTCCTGGCGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIESSAS*IPGETE
Trigger: TTCTGTCTCGCCAGGAATTCAAGAAGCTGAAGATTC...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR TCA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCAAACTCGTTCTCCATCTaGGCACAGTCGAAGCGCATC +
Preference number: 4 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPNSFSI*AQSKRI
Trigger: GATGCGCTTCGACTGTGCTCAGATGGAGAACGAGTT...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTGCTGCTCCAGCTGCTTaGTGGTGTTTTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPAAPAA*WCFPAG
Trigger: GCCAGCAGGAAAACACCATCAAGCAGCTGGAGCAGC...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp TCTGAAGGTCTCTTCCAACTTGGCCCTTTGCATGTCTGTGATCCCACCACGGATGATGGAGCCGGAGGATaGGGACGAGTCAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: SEGLFQLGPLHVCDPTTDDGAGG*GRVRQV
Trigger: CACCTGTCTGACTCGTCCTCATCCTCCGGCTCCATC...ATCCGTGGTGGGATCACAGACATGCAAAGGGCCAAGTTGGAAGAGACCTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR GCA 90 bp CTTGGCCCAAACGTCATTTGCTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTGGCCATGCTGAGGCAGTaGCAGGGCCGTGAGATGATG +
Preference number: 4 (lower is better)
Translates to: LGPNVICWMICRRWCLKVAMLRQ*QGREMM
Trigger: CATCATCTCACGGCCCTGGCACTGCCTCAGCATGGC...CACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACTTGGGCACCTTCCCTaGAGAAGGCACCGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGLGHLP*RRHRGP
Trigger: GGGCCCTCGGTGCCTTCTGCAGGGAAGGTGCCCAAG...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGCAGCAGCGCCCAGTATaGCCGCTGTGCCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRQQRPV*PLCHGA
Trigger: GGCTCCATGGCACAGCGGGCATACTGGGCGCTGCTG...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACCCTTCCGGCTGCCGTaGCACGCGGCTCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGPFRLP*HAALLQ
Trigger: TTGGAGAAGAGCCGCGTGGCACGGCAGCCGGAAGGG...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGAAAGGAGCTGCTATCTaGCATCTGGTGCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLKGAAI*HLVQVQ
Trigger: CTGAACCTGCACCAGATGGCAGATAGCAGCTCCTTT...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCAAACCTCATGAACTaGTTCCGACCCACTTTGCAG +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLSNLMN*FRPTLQ
Trigger: CTGCAAAGTGGGTCGGAAGCAGTTCATGAGGTTTGA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCCTGGAAGAGAACGATaGTCTGAGATACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLPGRER*SEIPAS
Trigger: AGAAGCTGGTATCTCAGAGCATCGTTCTCTTCCAGG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCTCAAGTCAGCAATCTTaGTTTCTAGCAGATCTGTGT +
Preference number: 4 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGSSQQS*FLADLC
Trigger: ACACAGATCTGCTAGAAAGCAAGATTGCTGACTTGA...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTAGCCTCTCCTCGCATTaGTGCAGACGCTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLSLSSH*CRRFLR
Trigger: CCTCAGAAAGCGTCTGCAGCAATGCGAGGAGAGGCT...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGAACTCCCCAAGCTTTTaGTCCAGCTCTTTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLNSPSF*SSSFLA
Trigger: AGCCAGGAAAGAGCTGGAGCAAAAGCTTGGGGAGTT...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTTGATGGTGTTTTCCTaGTGGCTCTGGATTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLLMVFS*WLWIFC
Trigger: ACAGAAAATCCAGAGCCAGCAGGAAAACACCATCAA...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATAACCGCTGGCGGAGCTaGTCCAGCTGCTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNNRWRS*SSCLMV
Trigger: CACCATCAAGCAGCTGGAGCAGCTCCGCCAGCGGTT...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp ACAGCCACATTCTTCTGGATGCACTGTGCAGCCAGTCGGCGAATCTTCAGCTTCTGCTCCAGCTGGCTGTaGACTTTCTCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TATFFWMHCAASRRIFSFCSSWL*TFSSSS
Trigger: GGAGGAGCTGGAGAAAGTGCACAGCCAGCTGGAGCA...GAAGCTGAAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGGCTGTGAGCACCTTCTaGGTCTTCAAGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSAVSTF*VFKASS
Trigger: TGAGGAGGCCTTGAAGACGCAGAAGGTGCTCACAGC...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATAGGTCCTTGTGCTTCTaGATCAGCTCATTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHRSLCF*ISSFRS
Trigger: TGACCTGAATGAGCTGATGCAGAAGCACAAGGACCT...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GTAAGCGGACCTGAGAGGGATTTTGATCCACAACAGCCACGGTGGTCCCTGGGGTGCAGTTCTTGGATCTaGCCAATGTCAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VSGPERDFDPQQPRWSLGCSSWI*PMSAAD
Trigger: GTCTGCTGCTGACATTGGGCAGATCCAAGAACTGCA...CCCCAGGGACCACCGTGGCTGTTGTGGATCAAAATCCCTCTCAGGTCCGCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CTTGGCCCAAACGTCATTTGCTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTGTCTTCCAAGGCAGCCTaGAGGTCGGCAATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: LGPNVICWMICRRWCLKVSSKAA*RSAIRR
Trigger: TCGGCGGATTGCCGACCTGCAGGCTGCCTTGGAAGA...CACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGATCACTGTCACTGGATaGCACTTCTTCCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLITVTG*HFFQGS
Trigger: GCTGCCTTGGAAGAAGTGGCATCCAGTGACAGTGAT...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR GCA 90 bp CTTGGCCCAAACGTCATTTGCTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTGTGGTGGACCGGGCTCTaGTCAGTGCCAATGCCGACT +
Preference number: 4 (lower is better)
Translates to: LGPNVICWMICRRWCLKVWWTGL*SVPMPT
Trigger: AGTCGGCATTGGCACTGAGCAGAGCCCGGTCCACCA...CACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCCGTTTCAAAGTGGATaGTTGAACGCTGTGAACCGT +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSPFQSG*LNAVNR
Trigger: ACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGG...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGCTGATGGAAATTTCTaGGATCTCTCGTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAADGNF*DLSFWR
Trigger: TCTCCAGAACGAGAGATCCCAGAAATTTCCATCAGC...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATAGTGCCACAGTTCCTTaGCCTGGGTCCCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNSATVP*PGSPRP
Trigger: GGGTCTTGGGGACCCAGGCCAAGGAACTGTGGCACT...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACTTCTCTGCTTTCCCTaGTCGCACCCCCTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGLLCFP*SHPLAG
Trigger: CCCGGCGAGGGGGTGCGACCAGGGAAAGCAGAGAAG...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGTTCCCGGACTTACCCTaGGGTTGCCCCATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSFPDLP*GCPIFS
Trigger: GGAAAAGATGGGGCAACCCCAGGGTAAGTCCGGGAA...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GGGTTTGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCATGCTGCTTCCCAGGAGCTGCTaGCGACTCCACCATTGTGCT +
Preference number: 4 (lower is better)
Translates to: GFGTRQWIKCSRDLLIMLLPRSC*RLHHCA
Trigger: AGCACAATGGTGGAGTCGCCAGCAGCTCCTGGGAAG...CAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACCATGGAGAACCGGGTaGCACTGCGGCTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASPWRTG*HCGCGP
Trigger: TGGCCCACAGCCGCAGTGCCACCCGGTTCTCCATGG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGGTTTATCTTCAGGCTTaGACCACACGCCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLVYLQA*TTRPCQ
Trigger: TTGGCATGGGCGTGTGGTCCAAGCCTGAAGATAAAC...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTATCTGCAGCTTGATCTaGGAGCACGGGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLICSLI*EHGAFL
Trigger: GAGGAAAGCCCCGTGCTCCCAGATCAAGCTGCAGAT...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CTTGGCCCAAACGTCATTTGCTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTGACCAGGCTGCGGTGGTaGTGGAGATTCCTGCCCACT +
Preference number: 4 (lower is better)
Translates to: LGPNVICWMICRRWCLKVTRLRW*WRFLPT
Trigger: AGTGGGCAGGAATCTCCACCACCACCGCAGCCTGGT...CACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGAGCTTCTTGAATTCCTaGCGAGACAGAAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMSFLNS*RDRKPL
Trigger: CAAGGGCTTTCTGTCTCGCCAGGAATTCAAGAAGCT...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGACAGCCACATTCTTCTaGATGCACTGTGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRTATFF*MHCAAS
Trigger: ACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGT...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCACAGGTAAGATGGTaGCACTTCCTCTTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLSQVRW*HFLFSW
Trigger: CCAACTGAAGAGGAAGTGCCACCATCTTACCTGTGA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTTCCCGATGGCCAATCTaGTCACAGAGGGTTCCGATC +
Preference number: 4 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLSRWPI*SQRVPI
Trigger: GATCGGAACCCTCTGTGACCAGATTGGCCATCGGGA...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCAGTATCACTGTCACTaGATGCCACTTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMQYHCH*MPLLPR
Trigger: CCTTGGAAGAAGTGGCATCCAGTGACAGTGATACTG...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCAGTATCACTGTCACTaGATGCCACTTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSQYHCH*MPLLPR
Trigger: CCTTGGAAGAAGTGGCATCCAGTGACAGTGATACTG...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCAGTATCACTGTCACTaGATGCCACTTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHQYHCH*MPLLPR
Trigger: CCTTGGAAGAAGTGGCATCCAGTGACAGTGATACTG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTTCTTGCTGTGGACATTaGTGGACCGGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLSCCGH*WTGLCS
Trigger: TGAGCAGAGCCCGGTCCACCAATGTCCACAGCAAGA...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGCCCAGCGTGGACCCCTaGCCTCTCTGGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRPSVDP*PLWALF
Trigger: GAAGAGAGCCCAGAGAGGCCAGGGGTCCACGCTGGG...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTTCGTAGTCGAGGCTTaGGAGTTTCCAGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLFVVEA*EFPAEW
Trigger: CCATTCAGCTGGAAACTCCCAAGCCTCGACTACGAA...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCATCGAAGTCCACTTTaGTCTTGCGTTCGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: HPRRICLCGLISPLEGGHHRSPL*SCVRSR
Trigger: TCGACTACGAACGCAAGACCAAAGTGGACTTCGATG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTCTTCCGTTTCAAAGTaGATGCTTGAACGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHSSVSK*MLERCE
Trigger: TTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGA...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCGCCACCGGGGAGGCCTaGCCAGTCTCTCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FYSNSPTPICTPSTLWNPATGEA*PVSLSP
Trigger: TGGAGACAGAGAGACTGGCCAGGCCTCCCCGGTGGC...GGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
3UTR CAA 72 bp ATCCTCGAGGCCCCATCGGCTTGGCCCAAACGTCATTaGCTGGATGATCTGTCGAAGGTGGTGCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: ILEAPSAWPKRH*LDDLSKVVLEG
Trigger: ACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTCGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 72 bp GGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTaGATCATGCTGGTCAGCGCATCCATCTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GTRQWIKCSRDL*IMLVSASICSL
Trigger: CAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGTTCTCCATCTGGGTCTaGGGCTCACCTGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSFSIWV*GSPVFS
Trigger: AGAGAAGACAGGTGAGCCTCAGACCCAGATGGAGAA...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATACCATGGCCAGTCCTTaGCTGCGAGGAACACAGCCA +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNTMASP*LRGTQP
Trigger: TGGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGT...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGGAGGTGGCCGCCTGTaGAAGCTCCTCCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGGGGRL*KLLPHL
Trigger: AAGATGGGGGAGGAGCTTTCACAGGCGGCCACCTCC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCCGTTTATCCTGGGGCTaGGGATGCGGCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FYSNSPTPICTPSTLWNPRLSWG*GCGCWW
Trigger: CCACCAGCAGCCGCATCCTCAGCCCCAGGATAAACG...GGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACTCCGAGAGGGCCGCTaGAGGACTGGGCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASLREGR*RTGQLF
Trigger: GAAAAGCTGCCCAGTCCTTCAGCGGCCCTCTCGGAG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR TCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGGGGACTCGCAGGAACTaGATTGGGTTTTCGACTTTT +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLGTRRN*IGFSTF
Trigger: AAAAGTCGAAAACCCAATTCAGTTCCTGCGAGTCCC...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR TCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGACGAGTCAGACAGGTaGGCGGGATCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGDESDR*AGSSLG
Trigger: GCCCAAGGAGGATCCCGCTCACCTGTCTGACTCGTC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGCTCATCTCGCCTCTTaGGGGTGGCCATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRAHLAS*GWPCWL
Trigger: CAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp GGGTTTGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCATGCTGGGCTTCCAGATCTGGTaGCACTGCTGGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GFGTRQWIKCSRDLLIMLGFQIW*HCWTCC
Trigger: ACAGCAAGTCCAGCAGTGGCACCAGATCTGGAAGCC...CAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CTTGGCCCAAACGTCATTTGCTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTGGCCCCTTCCCCACTATaGTTTGACCCTCCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: LGPNVICWMICRRWCLKVAPSPL*FDPPRL
Trigger: AAGGCGAGGAGGGTCAAAGCATAGTGGGGAAGGGGC...CACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp ACAGCCACATTCTTCTGGATGCACTGTGCAGCCAGTCGGCGAATCTTCAGCTTCAAGTCTCACCCTTCCTaGTGGCAGGTCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TATFFWMHCAASRRIFSFKSHPS*WQVCCS
Trigger: GGAACAGCAGACCTGCCAGCAGGAAGGGTGAGACTT...GAAGCTGAAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTCTTGGGCACCTTCCCTaGAGAAGGCACCGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPLGHLP*RRHRGP
Trigger: GGGCCCTCGGTGCCTTCTGCAGGGAAGGTGCCCAAG...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp CCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCCAGCAGCGCCCAGTATaGCCGCTGTGCCATGGAGCC +
Preference number: 4 (lower is better)
Translates to: PQTTHSLGWFYSNSPTPIQQRPV*PLCHGA
Trigger: GGCTCCATGGCACAGCGGGCATACTGGGCGCTGCTG...GATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGAACCGGGTGGCACTaGGGCTGTGGGCCATGGACA +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASRTGWH*GCGPWT
Trigger: TGTCCATGGCCCACAGCCGCAGTGCCACCCGGTTCT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATCCATGCCAAAGGAGCTaGTATCTGCCATCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDPCQRS*YLPSGA
Trigger: TGCACCAGATGGCAGATAGCAGCTCCTTTGGCATGG...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACGCCAAACAGCCCGCTaGTCGCTCTCTGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGRQTAR*SLSEMP
Trigger: CGGCATCTCAGAGAGCGAGCAGCGGGCTGTTTGGCG...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGCTCAGCTGCGTAGTTTaGCCACTCAAACCTCATGAA +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLLSCVV*PLKPHE
Trigger: TTCATGAGGTTTGAGTGGGCAAACTACGCAGCTGAG...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTCACACTGGAGGGGCTaGTCACAGGTCCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LGWFYSNSPTPICTPSTLSHWRG*SQVRRA
Trigger: TGCCCTGCGGACCTGTGAGCAGCCCCTCCAGTGTGA...GAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGTGTAGCATCTCCACCTaGTGCTTCAGCTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSCSIST*CFSCEA
Trigger: AGCCTCACAGCTGAAGCAGCAGGTGGAGATGCTACA...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCCTTTCTTCTCGAAAGCAGCACACAGACGCTCGAGCACCACACTGTCACTGGTCCGCCTTCTCAAACTaGAGCCTGTACAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LLSSRKQHTDARAPHCHWSAFSN*SLYSCS
Trigger: TGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGA...CCAGTGACAGTGTGGTGCTCGAGCGTCTGTGTGCTGCTTTCGAGAAGAAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGTTGGCTTCCTCCAGCTaGAGCTGCAGTTCTTGGATC +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSLASSS*SCSSWI
Trigger: GATCCAAGAACTGCAGCTGCAGCTGGAGGAAGCCAA...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCTGGCTGCTCTCCCGCTaGTGGGACTCGGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFWLLSR*WDSEVA
Trigger: GGCCACCTCCGAGTCCCAGCAGCGGGAGAGCAGCCA...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAACTTCTCCAGCTCCATaGACCGCCGGCTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGTSPAP*TAGWPL
Trigger: CAGAGGCCAGCCGGCGGTGCATGGAGCTGGAGAAGT...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCATCACTGTCACTGGATaGCACTTCTTCCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKAITVTG*HFFQGS
Trigger: GCTGCCTTGGAAGAAGTGGCATCCAGTGACAGTGAT...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACAGCTCAACCAGGACTaGAGGCTGCCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASQLNQD*RLPSGW
Trigger: CCAGCCAGAGGGCAGCCTGCAGTCCTGGTTGAGCTG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACAGCTCAACCAGGACTaGAGGCTGCCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGQLNQD*RLPSGW
Trigger: CCAGCCAGAGGGCAGCCTGCAGTCCTGGTTGAGCTG...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTTCTGCTCAGTGCCAATaGCGACTGGGTCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPSAQCQ*RLGPLS
Trigger: ACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGA...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACCGGGCTCTGCTCAGTaGCAATGCCGACTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASPGSAQ*QCRLGP
Trigger: AGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp GGTCTCTTCCAACTTGGCCCTTTGCATGTCTGTGATCCCACCACGGATCTTCTGCGCTGTGAACCGTCTTaGCCACCTTTGGCTGATCCA +
Preference number: 4 (lower is better)
Translates to: GLFQLGPLHVCDPTTDLLRCEPS*PPLADP
Trigger: TGGATCAGCCAAAGGTGGGCAAGACGGTTCACAGCG...CAGAAGATCCGTGGTGGGATCACAGACATGCAAAGGGCCAAGTTGGAAGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGGCTGATGGAAATTTCTaGGATCTCTCGTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMADGNF*DLSFWR
Trigger: TCTCCAGAACGAGAGATCCCAGAAATTTCCATCAGC...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACTTGGGCTTGGGGCCTaGTCCCCTGCCTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGLGLGA*SPACLC
Trigger: GCAAAGACAGGCAGGGGACCAGGCCCCAAGCCCAAG...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGAACTCGCCCTGCACTTaGCTTGTCTTCTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSNSPCT*LVFSIW
Trigger: CCAGATGGAGAAGACAAGCCAAGTGCAGGGCGAGTT...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTGAGGGCCCCCGGGGCTaGAGGACAATCAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPEGPRG*RTIRSG
Trigger: GCCTGATCTGATTGTCCTCCAGCCCCGGGGGCCCTC...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATACCAAACGTCATTTGCTaGATGATCTGTCGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: CPPLADPAKEVGVWGFRIPNVIC*MICRRW
Trigger: CCACCTTCGACAGATCATCCAGCAAATGACGTTTGG...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATGATATCGCTGTAGCGTaGAGACAAAGGTCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDDIAVA*RQRSAG
Trigger: ACCAGCGGACCTTTGTCTCCACGCTACAGCGATATC...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGACTGGTGCAGGACCTaGGGTGCATCCAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQDWCRT*GASRAE
Trigger: CTCGGCCCTGGATGCACCCCAGGTCCTGCACCAGTC...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATAAGCTTCTTGAATTCCTaGCGAGACAGAAAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: CPPLADPAKEVGVWGFRISFLNS*RDRKPL
Trigger: CAAGGGCTTTCTGTCTCGCCAGGAATTCAAGAAGCT...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCAACACTGGTGTTCTCCTaGGTCACTTTCTCACGGAGA +
Preference number: 4 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPTLVFS*VTFSRR
Trigger: TCTCCGTGAGAAAGTGACCCAGGAGAACACCAGTGT...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGAGCAGCTCCCGTTTATaGTCCTGTAGCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSSSSRL*SCSIST
Trigger: GGTGGAGATGCTACAGGACCATAAACGGGAGCTGCT...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCATGCTGGTCAGTCACTCTGCTCCAGCTaGCTGTGCACTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WYQAVDKVQPGPFDHAGQSLCSS*LCTFSS
Trigger: GCTGGAGAAAGTGCACAGCCAGCTGGAGCAGAGTGA...CTGACCAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATAGTGCCAATGCCGACTaGGTCCTCTCAGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNSANAD*VLSVSP
Trigger: TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACT...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCAGTCGTCTGGTAAATaGGGAGAGTGGGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: WYQAVDKVQPGPFDHAGQQSSGK*GEWASP
Trigger: AGGACTGGCCCACTCTCCCCATTTACCAGACGACTG...CTGACCAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ACAGCCACATTCTTCTGGATGCACTGTGCAGCCAGTCGGCGAATCTTCAGCTTCACAACAGCATGTCCCTaGGTGTGGTCGGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: TATFFWMHCAASRRIFSFTTACP*VWSESS
Trigger: TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGT...GAAGCTGAAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCAGCAAACTGGCGGTTCTaGAAAACAAGCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPANWRF*KTSGSF
Trigger: AAAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGC...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATGGTTCCTCCATCAGGTaGGCAAACTGGCGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNGSSIR*ANWRFW
Trigger: CCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACC...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGTTCGTAGTCGAGGCTTaGGAGTTTCCAGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVFVVEA*EFPAEW
Trigger: CCATTCAGCTGGAAACTCCCAAGCCTCGACTACGAA...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGTCTTCCGTTTCAAAGTaGATGCTTGAACGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLESSVSK*MLERCE
Trigger: TTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGA...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGGCTTGACTCCAGAGCGGGATCCTCCTTaGGCTCCGGGCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VIVESGSLQGQLQGGLTPERDPP*APGSSS
Trigger: TGAAGAAGAGCCCGGAGCCCAAGGAGGATCCCGCTC...TGGAGTCAAGCCTCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCGGTGGCCATGCTGGCTaGCTCTGGCCACCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTGGHAG*LWPPGR
Trigger: CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACC...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTTCAGGCCAACCACACTaGGAGCCCAGCATCCCCGCA +
Preference number: 4 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSSGQPH*EPSIPA
Trigger: TGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACACACAGTTTGGGTTaGTTCTATTCTAACAGTCCT +
Preference number: 4 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLTHSLG*FYSNSP
Trigger: AGGACTGTTAGAATAGAACCAACCCAAACTGTGTGT...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
3UTR CAA 72 bp GAGAAGGCACAGATGCCCAGGAGTCAACACTTTATTTaGTTCAGGCCAACCACACTGGGAGCCCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: EKAQMPRSQHFI*FRPTTLGAQHP
Trigger: GGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAAATAAAGTGTTGACTCCTGGGCATCTGTGCCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
3UTR CAA 72 bp TCCTCCTTGGGCTCCGGGCTCTTCTTCAAAATGGTCTaGATCCCCGAGAGAAAGGAACGGTTAGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSLGSGLFFKMV*IPERKERLASS
Trigger: GGAAGAGGCTAACCGTTCCTTTCTCTCGGGGATCAAGACCATTTTGAAGAAGAGCCCGGAGCCCAAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
3UTR CAA 72 bp CCGTCACCCGCAAGTCGTGGGATTCCTGGTCGACTTTaGATGCTGTCAGCACTTTTGAAGGACACGATGGAG +
Preference number: 4 (lower is better)
Translates to: PSPASRGIPGRL*MLSALLKDTME
Trigger: CTCCATCGTGTCCTTCAAAAGTGCTGACAGCATCAAAAGTCGACCAGGAATCCCACGACTTGCGGGTGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGGGGCGTCATGGGGATaGGTCTTCTCTGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGGASWG*VFSGLA
Trigger: AGCCAAGCCAGAGAAGACTCATCCCCATGACGCCCC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCACCAGGCTCTTGTTCCGCGTAAATCCATCCTTCTaGGCCAGCCAGACTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AFSNCSLYSCSSTRLLFRVNPSF*ASQTFS
Trigger: AGAGAAAGTCTGGCTGGCTCAGAAGGATGGATTTAC...GCGGAACAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGGCCCGGAGGACAGTaGAGGTGGCTCGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRRPGGQ*RWLGSS
Trigger: AGAAGATCCGAGCCACCTTCACTGTCCTCCGGGCCT...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CTTGGCCCAAACGTCATTTGCTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTGAGGCCACATCACCTTTaGAGCGCTCATCGGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LGPNVICWMICRRWCLKVRPHHL*SAHRQG
Trigger: ACCTTGCCGATGAGCGCTTCAAAGGTGATGTGGCCT...CACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAGATGGAGCCGGAGGATaGGGACGAGTCAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASDGAGG*GRVRQV
Trigger: CACCTGTCTGACTCGTCCTCATCCTCCGGCTCCATC...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGCTCATCTCGCCTCTTaGGGGTGGCCATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQAHLAS*GWPCWL
Trigger: CAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGC...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGTCCCCTGCCTGTCTTTaGCCTGGGGCTCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRSPACL*PGAQPL
Trigger: AAGAGGCTGAGCCCCAGGGCAAAGACAGGCAGGGGA...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTATTTGGGGCCTTACGTaGTTCCCTTCACTCCCTACG +
Preference number: 4 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPIWGLT*FPSLPT
Trigger: CGTAGGGAGTGAAGGGAAGCACGTAAGGCCCCAAAT...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGCCCAGGGCCACAATaGTCTGGTCTCTCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASSPGPQ*SGLSAG
Trigger: ACCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGCCATCCACACTGCCTaGCATCCCCACCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGAIHTA*HPHQVF
Trigger: GAACACCTGGTGGGGATGGCAGGCAGTGTGGATGGC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGCCATCCACACTGCCTaGCATCCCCACCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRAIHTA*HPHQVF
Trigger: GAACACCTGGTGGGGATGGCAGGCAGTGTGGATGGC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCTCCTCTGCAGGGCCTaGTGGGAGGTGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTLLCRA*WEVPSR
Trigger: CCTGGAGGGCACCTCCCAGCAGGCCCTGCAGAGGAG...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTAGGCAGTGGATAAAGTaGAGCCGGGACCTTTTGATC +
Preference number: 4 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLRQWIK*SRDLLI
Trigger: GATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCT...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAGCTGGTAGTACTGGCTaGTCTCCCGCTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASAGSTG*SPAAGT
Trigger: AGTCCCAGCAGCGGGAGAGCAGCCAGTACTACCAGC...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTGAGGGTTTGCCTCACTaGTGCAAGTTCCTCCACGTA +
Preference number: 4 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPEGLPH*CKFLHV
Trigger: TACGTGGAGGAACTTGCAGCAGTGAGGCAAACCCTC...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGTATTTCTTCATTATaGTCGCAACATCGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: PRRICLCGLISPLEGGHAGISSL*SQHRRL
Trigger: AAGACGACGATGTTGCGAGCATAATGAAGAAATACC...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGGGTATTTCTTCATTATaGTCGCAACATCGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGGISSL*SQHRRL
Trigger: AAGACGACGATGTTGCGAGCATAATGAAGAAATACC...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTCTCTCCATATGCAATaGAAGTGGACTCCACTATTC +
Preference number: 4 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSSLHMQ*KWTPLF
Trigger: GAATAGTGGAGTCCACTTGCATTGCATATGGAGAGA...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTAGGGGACAGTCTTTTTaGTTGGTGTCGCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPRGQSF*LVSHWS
Trigger: GCTCCAGTGCGACACCAACCAAAAAGACTGTCCCCT...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCAGTGCCACAGTTCCTTaGCCTGGGTCCCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: LGWFYSNSPTPICTPSTLSATVP*PGSPRP
Trigger: GGGTCTTGGGGACCCAGGCCAAGGAACTGTGGCACT...GAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp GCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCACCAGGCTCTTGTTCCGCTTGTCCTTCTTATTCTaGGGACCGTCCCACTTACTC +
Preference number: 4 (lower is better)
Translates to: AFSNCSLYSCSSTRLLFRLSFLF*GPSHLL
Trigger: GAGTAAGTGGGACGGTCCCCAGAATAAGAAGGACAA...GCGGAACAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CTTGGCCCAAACGTCATTTGCTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTGTGTGCTCACCTCCTTTaGGGCTTCACAGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LGPNVICWMICRRWCLKVCAHLL*GFTALL
Trigger: GAGAAGGGCTGTGAAGCCCCAAAGGAGGTGAGCACA...CACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGGGGCTGGCCCGTCTTaGTTCTCCTTCCGTATCCGA +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRGAGPS*FSFRIR
Trigger: TCGGATACGGAAGGAGAACCAAGACGGGCCAGCCCC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTATGCCCGCTGTGCCATaGAGCCAATGTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSMPAVP*SQCGQA
Trigger: TGCCTGCCCACATTGGCTCCATGGCACAGCGGGCAT...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp GTAAGCGGACCTGAGAGGGATTTTGATCCACAACAGCCACGGTGGTCCCTGGGGAATCCAGCCAGCATCTaGGAGAAAACCAGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: VSGPERDFDPQQPRWSLGNPASI*EKTRKL
Trigger: TAACTTCCTGGTTTTCTCCCAGATGCTGGCTGGATT...CCCCAGGGACCACCGTGGCTGTTGTGGATCAAAATCCCTCTCAGGTCCGCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCACAGCTCCTCAAAGGTaGCCGCCCGGTCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PQTTHSLGWFYSNSPTPITAPQR*PPGPCP
Trigger: AGGGCAAGGACCGGGCGGCCACCTTTGAGGAGCTGT...GATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCACACAGGAGGCAGCTTaGCCCGGGCCTGGAATAGAC +
Preference number: 4 (lower is better)
Translates to: FYSNSPTPICTPSTLWNPTQEAA*PGPGID
Trigger: GTCTATTCCAGGCCCGGGCCAAGCTGCCTCCTGTGT...GGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAACCGCGGCAAGGCTGCTaGCAAAGGTCCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQPRQGC*QRSSSP
Trigger: TGGTGAGGAGGACCTTTGCCAGCAGCCTTGCCGCGG...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGCTGGACCCTCAGTGCTaGGATATCCAGGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRLDPQC*DIQGQR
Trigger: CCTCTGGCCCTGGATATCCCAGCACTGAGGGTCCAG...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTTCTTCTCCAGCTCATaGTTTCGACTTTGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMFFSSS*FRLCWF
Trigger: GAACCAACAAAGTCGAAACCATGAGCTGGAGAAGAA...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGCTGGGACTCGGAGGTaGCCGCCTGTGAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQAGTRR*PPVKAP
Trigger: AGGAGCTTTCACAGGCGGCCACCTCCGAGTCCCAGC...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGGGCCGCTGAAGGACTaGGCAGCTTTTCCCTCGACA +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGGPLKD*AAFPST
Trigger: TGTCGAGGGAAAAGCTGCCCAGTCCTTCAGCGGCCC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGTGCCCCTCCTTAGTGTaGAGGCCCCAGTCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRCPSLV*RPQSSG
Trigger: ACCAGACGACTGGGGCCTCCACACTAAGGAGGGGCA...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATGCCCCTCCTTAGTGTaGAGGCCCCAGTCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGCPSLV*RPQSSG
Trigger: ACCAGACGACTGGGGCCTCCACACTAAGGAGGGGCA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATATCAGGTGGGCAAACTaGCGGTTCTGGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDIRWAN*RFWKTS
Trigger: GCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGAT...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGAGCGGGATCCTCCTTaGGCTCCGGGCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGERDPP*APGSSS
Trigger: TGAAGAAGAGCCCGGAGCCCAAGGAGGATCCCGCTC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCGGGATTAAGGGAGCATaGAGGAGGAGCATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKAGIKGA*RRSICF
Trigger: GAAACAAATGCTCCTCCTCCATGCTCCCTTAATCCC...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
3UTR CAA 72 bp AACGTCATTTGCTGGATGATCTGTCGAAGGTGGTGCTaGAAGGTGGCCGTGTTCAGCTCCTCATACTCGCAG +
Preference number: 4 (lower is better)
Translates to: NVICWMICRRWC*KVAVFSSSYSQ
Trigger: CTGCGAGTATGAGGAGCTGAACACGGCCACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp TTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCGCTCCCAGGAGAGCTTaGCTGGTCGTCCTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: FYSNSPTPICTPSTLWNPAPRRA*LVVLRD
Trigger: ATCTCTCAGGACGACCAGTCAAGCTCTCCTGGGAGC...GGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGCATCCATCTGCAGCTTaGTCTGGGAGCACGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRHPSAA*SGSTGL
Trigger: AAGCCCCGTGCTCCCAGATCAAGCTGCAGATGGATG...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCATGCTGGTCAGAAGAGAACGATGCTCTaGGATACCAGCTTCTCTCGC +
Preference number: 4 (lower is better)
Translates to: WYQAVDKVQPGPFDHAGQKRTML*DTSFSR
Trigger: GCGAGAGAAGCTGGTATCTCAGAGCATCGTTCTCTT...CTGACCAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAACCATGGCCAGTCCTTaGCTGCGAGGAACACAGCCA +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGTMASP*LRGTQP
Trigger: TGGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGT...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTTGCTTCAGCTGCTGCTaGAGCTGGCCTAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPCFSCC*SWPSSH
Trigger: GTGGGAGCTAGGCCAGCTTCAGCAGCAGCTGAAGCA...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATATGTCAGCAGCAGACTaGGCAATGAGGTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNMSAAD*AMRSLC
Trigger: GCACAAGGACCTCATTGCTCAGTCTGCTGCTGACAT...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACCTCTGGCTGGGAGCTaGGGATGGAGACGTTATCCA +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASPLAGS*GWRRYP
Trigger: TGGATAACGTCTCCATCCTCAGCTCCCAGCCAGAGG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTACTCCGAGCTTCACCTaGGTTCCCGGACTTACCCTG +
Preference number: 4 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSTPSFT*VPGLTL
Trigger: CAGGGTAAGTCCGGGAACGCAGGTGAAGCTCGGAGT...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCCTTCCGGCTGCCGTaGCACGCGGCTCTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTPFRLP*HAALLQ
Trigger: TTGGAGAAGAGCCGCGTGGCACGGCAGCCGGAAGGG...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GGGTTTGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCATGCTGAAAGGAGCTGCTATCTaGCATCTGGTGCAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GFGTRQWIKCSRDLLIMLKGAAI*HLVQVQ
Trigger: CTGAACCTGCACCAGATGGCAGATAGCAGCTCCTTT...CAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTTCACCGCGGCAAGGCTaGTGGCAAAGGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPSPRQG*WQRSSS
Trigger: TGAGGAGGACCTTTGCCAGCAGCCTTGCCGCGGTGA...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAATCACCGCGGCAAGGCTaGTGGCAAAGGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQSPRQG*WQRSSS
Trigger: TGAGGAGGACCTTTGCCAGCAGCCTTGCCGCGGTGA...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAAGCTGGACCCTCAGTaGTGGGATATCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASKLDPQ*WDIQGQ
Trigger: CTGGCCCTGGATATCCCAGCACTGAGGGTCCAGCTT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGCCTGGGCCAGCTaGAGGTCAAACTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASRAWAS*RSNFFC
Trigger: GCAGAAGAAGTTTGACCTGCAGCTGGCCCAGGCCCT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCTCATGGAGGACCATCTaGTTCTCTTCATACTCTTGC +
Preference number: 4 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKASWRTI*FSSYSC
Trigger: GCAAGAGTATGAAGAGAAGCAGATGGTCCTCCATGA...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCACCAGGCTCTTGTTCCGCTCATGGAGGACCATCTaGTTCTCTTCATACTCTTGC +
Preference number: 4 (lower is better)
Translates to: AFSNCSLYSCSSTRLLFRSWRTI*FSSYSC
Trigger: GCAAGAGTATGAAGAGAAGCAGATGGTCCTCCATGA...GCGGAACAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGTGCCATCCTCCATGGTaGCCAGAAGGAGCTGCACGT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRCHPPW*PEGAAR
Trigger: ACGTGCAGCTCCTTCTGGGCACCATGGAGGATGGCA...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGTGCTCCAGCTGGCTGTaGACTTTCTCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRCSSWL*TFSSSS
Trigger: GGAGGAGCTGGAGAAAGTGCACAGCCAGCTGGAGCA...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACTTTTCGGCCGCTGCTaGCACAATCCACTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASLFGRC*HNPLPS
Trigger: AGACGGCAGTGGATTGTGGCAGCAGCGGCCGAAAAG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGCTTTTCGGCCGCTGCTaGCACAATCCACTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRLFGRC*HNPLPS
Trigger: AGACGGCAGTGGATTGTGGCAGCAGCGGCCGAAAAG...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp AGGTTCCTCCATCAGGTGGGCAAACTGGCGGTTCTGGAAAACAAGCGGCTCCTTCCGTTTCAAAGTGGATaGTTGAACGCTGTGAACCGT +
Preference number: 4 (lower is better)
Translates to: RFLHQVGKLAVLENKRLLPFQSG*LNAVNR
Trigger: ACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGG...AAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGATGGAGGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GGGTTTGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCATGCTGTCAAACCTCATGAACTaGTTCCGACCCACTTGGACC +
Preference number: 4 (lower is better)
Translates to: GFGTRQWIKCSRDLLIMLSNLMN*FRPTWT
Trigger: GGTCCAAGTGGGTCGGAAGCAGTTCATGAGGTTTGA...CAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATTCTGTCTCGCTTCCTTaGCCTCTTTTTCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SGDVFVLREARGEEAGSNSVSLP*PLFQSP
Trigger: GGGGGACTGAAAAAGAGGCCAAGGAAGCGAGACAGA...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCGCCATGGAGCCAATGTaGGCAGGCAGGCCATCCCGG +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTAMEPM*AGRPSR
Trigger: CCGGGATGGCCTGCCTGCCCACATTGGCTCCATGGC...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAATGCCCGCTGTGCCATaGAGCCAATGTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQMPAVP*SQCGQA
Trigger: TGCCTGCCCACATTGGCTCCATGGCACAGCGGGCAT...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGCCACAATGCTCTaGTCTCTCCGCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASRATML*SLRWFS
Trigger: GCTGAACCAGCGGAGAGACCAGAGCATTGTGGCCCT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGTTCCACCACAGGGTTTaGTACCAGGCAGTGGATAAA +
Preference number: 4 (lower is better)
Translates to: STQSTPVILSPELVSSSSFHHRV*YQAVDK
Trigger: TTTATCCACTGCCTGGTACCAAACCCTGTGGTGGAA...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAAGGCTGCGGTGGTGGTaGAGATTCCTGCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQRLRWW*RFLPTP
Trigger: AGGAGTGGGCAGGAATCTCCACCACCACCGCAGCCT...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAAGCAGCTGCCACCATaGCCAGTCCTTGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRKQLPP*PVLDCE
Trigger: CTCGCAGTCAAGGACTGGCCATGGTGGCAGCTGCTT...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATTGCTCTTGAGCTCCTaGACCTCCCGGAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGLLLSS*TSRKAC
Trigger: ACAGGCCTTCCGGGAGGTCCAGGAGCTCAAGAGCAA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGCTCCCACCGGACACTaGTGTTCTCCTGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRAPTGH*CSPGSL
Trigger: AAGTGACCCAGGAGAACACCAGTGTCCGGTGGGAGC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTCAATCCACTGCCGTCTaGACACTCTCAGTATCACTG +
Preference number: 4 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPQSTAV*TLSVSL
Trigger: CAGTGATACTGAGAGTGTCCAGACGGCAGTGGATTG...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGTGCCAATGCCGACTaGGTCCTCTCAGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASSANAD*VLSVSP
Trigger: TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTTCCGAGGACGCAGTGTaGGCGACAACAGCATGTCCC +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPSEDAV*ATTACP
Trigger: GGGACATGCTGTTGTCGCCCACACTGCGTCCTCGGA...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATATCTTCCGTTTCAAAGTaGATGCTTGAACGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: CPPLADPAKEVGVWGFRISSVSK*MLERCE
Trigger: TTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGA...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATAAGTCGTGGGATTCCTaGTCGACTTTTGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDKSWDS*STFDAV
Trigger: GACAGCATCAAAAGTCGACCAGGAATCCCACGACTT...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCACTGGTTCCTACTTCTaGAGGTATTTCTTCATTATG +
Preference number: 4 (lower is better)
Translates to: PTTLGAQHPRRICLCGLITGSYF*RYFFIM
Trigger: CATAATGAAGAAATACCTCCAGAAGTAGGAACCAGT...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGACTGGTTCCTACTTCTaGAGGTATTTCTTCATTATG +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLETGSYF*RYFFIM
Trigger: CATAATGAAGAAATACCTCCAGAAGTAGGAACCAGT...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATACTGGTTCCTACTTCTaGAGGTATTTCTTCATTATG +
Preference number: 4 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHTGSYF*RYFFIM
Trigger: CATAATGAAGAAATACCTCCAGAAGTAGGAACCAGT...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGCAGTGCCAGGGCCGTaGGATGATGAGATGAGATGG +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQAVPGP*DDEMRW
Trigger: CCATCTCATCTCATCATCTCACGGCCCTGGCACTGC...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTTGCTGTTGGGTTGGCTaGTGGAAATTTCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPCCWVG*WKFLGS
Trigger: AGATCCCAGAAATTTCCATCAGCCAACCCAACAGCA...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGAGAGTCCACCACCATaGTGGAGGCCATGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGESPPP*WRPWRD
Trigger: ATCTCTCCATGGCCTCCATCATGGTGGTGGACTCTC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGCCAGCTCCTCCTTGCTaGCTGATGTCTTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRPAPPC*LMSCHP
Trigger: AGGATGGCAAGACATCAGTCAGCAAGGAGGAGCTGG...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCGCGGCTGCTGGTGGCTaGCTGTCGAGAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTAAAGG*LSRRSP
Trigger: AGGACTCCTTCTCGACAGTCAGCCACCAGCAGCCGC...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGCCCCCAACACCGTCTaGAGAGATGCATTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGAPNTV*RDAFEA
Trigger: AGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGAGGCGACAGCTAACTaGTTCCTCTGTCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASREATAN*FLCLAS
Trigger: GGAAGCGAGACAGAGGAAGCAGTTAGCTGTCGCCTC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTGCCCCTTCCCCACTATaGTTTGACCCTCCTCGCCTT +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPAPSPL*FDPPRL
Trigger: AAGGCGAGGAGGGTCAAAGCATAGTGGGGAAGGGGC...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGCTCCGAAGCTCACCTaGTTTCTCCCCCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRAPKLT*FLPHSQ
Trigger: CTGAGAATGGGGGAGAAAGCAGGTGAGCTTCGGAGC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCCTGCCTTCCCAGTCGTaGTCCGAAGCTCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: PQTTHSLGWFYSNSPTPILPSQS*SEAHLL
Trigger: AAGCAGGTGAGCTTCGGAGCACGACTGGGAAGGCAG...GATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp CCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTAGCCCAGGGCCACAATaGTCTGGTCTCTCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: PKLHTVWVGSILTVLPLSSPGPQ*SGLSAG
Trigger: ACCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCT...AGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAGTCAGCGCATCCATCTaGAGCTTGATCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASVSASI*SLIWEH
Trigger: GTGCTCCCAGATCAAGCTGCAGATGGATGCGCTGAC...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACCACATTCTTCTGGATaGACTGTGCAGCCAGTCGGC +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGPHSSG*TVQPVG
Trigger: GCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGG...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTTGGCCCAAACGTCATTTGCTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTGAGCAGATCTGTGTTCTaGCGGAGTTCATTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: LGPNVICWMICRRWCLKVSRSVF*RSSFRN
Trigger: GTTGCGGAATGAACTCCGGCAGAACACAGATCTGCT...CACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCCAGTCGAAGCGCATCTaGCACTCGTCTGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PQTTHSLGWFYSNSPTPIQSKRI*HSSAPP
Trigger: TGGAGGAGCAGACGAGTGGCAGATGCGCTTCGACTG...GATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGCATCTCCACCTGCTaGTTCAGCTGTGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASSISTC*FSCEAS
Trigger: GGAAGCCTCACAGCTGAAGCAGCAGGTGGAGATGCT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCCTTTCTTCTCGAAAGCAGCACACAGACGCTCGAGCACCACACTGTCACTGGAAGCCTTCCAAATCTTaGTTCTCATGGAGGACCATC +
Preference number: 4 (lower is better)
Translates to: LLSSRKQHTDARAPHCHWKPSKS*FSWRTI
Trigger: GATGGTCCTCCATGAGAAGCAAGATTTGGAAGGCTT...CCAGTGACAGTGTGGTGCTCGAGCGTCTGTGTGCTGCTTTCGAGAAGAAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGTTCCAGGTACTCGATaGGCATCTGAGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGVPGTR*ASEPPA
Trigger: TGCAGGTGGCTCAGATGCGCATCGAGTACCTGGAAC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATCTGCTCAGTGCCAATaGCGACTGGGTCCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGSAQCQ*RLGPLS
Trigger: ACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGGGTATTTCTTCATTATaGTCGCAACATCGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: FVQANHTGSPASPQDMPLGISSL*SQHRRL
Trigger: AAGACGACGATGTTGCGAGCATAATGAAGAAATACC...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTCCAGCGACATCACCATaGAGAACCGGGTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: PKLHTVWVGSILTVLPLSPATSP*RTGWHC
Trigger: GCAGTGCCACCCGGTTCTCCATGGTGATGTCGCTGG...AGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTGGGGTTCTGGAAGCCTaGAGAGTCCACCACCATGAT +
Preference number: 4 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSGVLEA*RVHHHD
Trigger: ATCATGGTGGTGGACTCTCCAGGCTTCCAGAACCCC...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGGGGTTCTGGAAGCCTaGAGAGTCCACCACCATGAT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRGVLEA*RVHHHD
Trigger: ATCATGGTGGTGGACTCTCCAGGCTTCCAGAACCCC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGAGCTTCTTCAGGAGTaGAGCGTCCAGCACCTGGAA +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGELLQE*SVQHLE
Trigger: TTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAGCCTTGAGAAAAACTTaGCTGTGCCCCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASALRKT*LCPTAT
Trigger: GGTGGCTGTGGGGCACAGCCAAGTTTTTCTCAAGGC...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCATTCTTCTCCAGCTCATaGTTTCGACTTTGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPFFSSS*FRLCWF
Trigger: GAACCAACAAAGTCGAAACCATGAGCTGGAGAAGAA...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAGTTGCTCAAGGGCGCTaGATTCCAACTTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASVAQGR*IPTSRA
Trigger: GGCTCTGGAAGTTGGAATCCAGCGCCCTTGAGCAAC...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATCTTGCCATCCTCCATaGTGCCCAGAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGSCHPP*CPEGAA
Trigger: TGCAGCTCCTTCTGGGCACCATGGAGGATGGCAAGA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCTGGCTCGATCCACGGTaGACTGTTCCAGGTACTCGA +
Preference number: 4 (lower is better)
Translates to: FYSNSPTPICTPSTLWNPWLDPR*TVPGTR
Trigger: TCGAGTACCTGGAACAGTCCACCGTGGATCGAGCCA...GGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGTGGCTCGATCCACGGTaGACTGTTCCAGGTACTCGA +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRWLDPR*TVPGTR
Trigger: TCGAGTACCTGGAACAGTCCACCGTGGATCGAGCCA...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACGGCAATCCGCCGAATaGATGTCTCCAGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASRQSAE*MSPGLS
Trigger: AGACAGACCTGGAGACATCCATTCGGCGGATTGCCG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAACCTGAGGTCTTGCTGTaGACATTGGTGGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQPEVLL*TLVDRA
Trigger: AGCCCGGTCCACCAATGTCCACAGCAAGACCTCAGG...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGTCTGTGGACTTTCTCTaGACGGCAAGCACTTCGCCG +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRSVDFL*TASTSP
Trigger: CGGCGAAGTGCTTGCCGTCCAGAGAAAGTCCACAGA...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGTAAATGGGGAGAGTaGGCCAGTCCTCTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQGKWGE*ASPLGP
Trigger: TGGGCCTAGAGGACTGGCCCACTCTCCCCATTTACC...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCTGCCCCTCCTTAGTGTaGAGGCCCCAGTCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFCPSLV*RPQSSG
Trigger: ACCAGACGACTGGGGCCTCCACACTAAGGAGGGGCA...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTTCGCAGGAACTGAATTaGGTTTTCGACTTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPSQELN*VFDFSG
Trigger: CCCCGAAAAGTCGAAAACCCAATTCAGTTCCTGCGA...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp TGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCATCGAAGTCCACTTTaGTCTTGCGTTCGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: WYQAVDKVQPGPFDHAGQHRSPL*SCVRSR
Trigger: TCGACTACGAACGCAAGACCAAAGTGGACTTCGATG...CTGACCAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAGGGCTTCCGGATAGCTaGGAGGAAGTCATCGAAGTC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASGLPDS*EEVIEV
Trigger: GACTTCGATGACTTCCTCCCAGCTATCCGGAAGCCC...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCACTGGTTCCTACTTCTaGAGGTATTTCTTCATTATG +
Preference number: 4 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGTGSYF*RYFFIM
Trigger: CATAATGAAGAAATACCTCCAGAAGTAGGAACCAGT...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGAAACTACACACAGTTTaGGTTGGTTCTATTCTAACA +
Preference number: 4 (lower is better)
Translates to: GAQHPRRICLCGLISPLEKLHTV*VGSILT
Trigger: TGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTT...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
3UTR CAA 72 bp CAAGTGGACTCCACTATTCTGAAGGTCTCTTCCAACTaGGCCCTTTGCATGTCTGTGATCCCACCACGGATC +
Preference number: 4 (lower is better)
Translates to: QVDSTILKVSSN*ALCMSVIPPRI
Trigger: GATCCGTGGTGGGATCACAGACATGCAAAGGGCCAAGTTGGAAGAGACCTTCAGAATAGTGGAGTCCACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR TCA 90 bp CCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCTGCTCCAGCTGCTTaGTGGTGTTTTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PKLHTVWVGSILTVLPLSAAPAA*WCFPAG
Trigger: GCCAGCAGGAAAACACCATCAAGCAGCTGGAGCAGC...AGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGCAGCAGACTGAGCAATaGGGTCCTTGTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRQQTEQ*GPCASA
Trigger: TGCAGAAGCACAAGGACCTCATTGCTCAGTCTGCTG...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTATTTGGGGCCTTACGTaGTTCCCTTCACTCCCTACG +
Preference number: 4 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSIWGLT*FPSLPT
Trigger: CGTAGGGAGTGAAGGGAAGCACGTAAGGCCCCAAAT...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp CCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTTCTCCACTGAGACCCTaGCATCCACACTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PKLHTVWVGSILTVLPLSSPLRP*HPHCLP
Trigger: TGGCAGGCAGTGTGGATGGCAGGGTCTCAGTGGAGA...AGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCATCAAGTCAGCAATCTTaGTTTCTAGCAGATCTGTGT +
Preference number: 4 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPSSQQS*FLADLC
Trigger: ACACAGATCTGCTAGAAAGCAAGATTGCTGACTTGA...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCCTCTCCTCGCATTGCTaGAGACGCTTTCTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGWFYSNSPTPICTPSTLLSSHC*RRFLRN
Trigger: GTTCCTCAGAAAGCGTCTGCAGCAATGCGAGGAGAG...GAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCATGTAGCATCTCCACCTaGTGCTTCAGCTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASCSIST*CFSCEA
Trigger: AGCCTCACAGCTGAAGCAGCAGGTGGAGATGCTACA...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATCCTTCTGGTGCATCTaGTTCATCCGCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGSFWCI*FIRSIS
Trigger: GGAGATCGAGCGGATGAAGCAGATGCACCAGAAGGA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTGCTGTGAGCACCTTCTaGGTCTTCAAGGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPAVSTF*VFKASS
Trigger: TGAGGAGGCCTTGAAGACGCAGAAGGTGCTCACAGC...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGTTCCAGGTACTCGATaGGCATCTGAGCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQVPGTR*ASEPPA
Trigger: TGCAGGTGGCTCAGATGCGCATCGAGTACCTGGAAC...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCAGATGACCGCCTCCTaGCTGCTGACGATGGCTCGA +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTQMTAS*LLTMAR
Trigger: TCGAGCCATCGTCAGCAGGCAGGAGGCGGTCATCTG...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCGCTGGTAGTACTGGCTaGTCTCCCGCTGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTAGSTG*SPAAGT
Trigger: AGTCCCAGCAGCGGGAGAGCAGCCAGTACTACCAGC...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATCTGTCTGGAGGGTTTaGCTCACTGCTGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGSVWRV*LTAASS
Trigger: GGAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCATGTCTCCTGAGGTCTTaGTGTGGACATTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASCLLRS*CGHWWT
Trigger: GGTCCACCAATGTCCACAGCAAGACCTCAGGAGACA...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCGGTATTTCTTCATTATaGTCGCAACATCGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKAGISSL*SQHRRL
Trigger: AAGACGACGATGTTGCGAGCATAATGAAGAAATACC...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCATCTGTCTCGCTTCCTTaGCCTCTTTTTCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASSVSLP*PLFQSP
Trigger: GGGGGACTGAAAAAGAGGCCAAGGAAGCGAGACAGA...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAGACAGTCTTTTTGGTTaGTGTCGCACTGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASDSLFG*CRTGAQ
Trigger: CTGGGCTCCAGTGCGACACCAACCAAAAAGACTGTC...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGGACAGTCTTTTTaGTTGGTGTCGCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASRGQSF*LVSHWS
Trigger: GCTCCAGTGCGACACCAACCAAAAAGACTGTCCCCT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAAGTCCGGGTCCAGCTTaGCCACCATCAACAACACAT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGSPGPA*PPSTTH
Trigger: ATGTGTTGTTGATGGTGGCCAAGCTGGACCCGGACT...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGTTTCCACCGTGTTTGTaGGCTCTGCTCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRFPPCL*ALLPPS
Trigger: AGAAGGAGGGAGCAGAGCCCACAAACACGGTGGAAA...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATTTCTCCCAGGGATTTaGGGCCTTACGTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGFLPGI*GLTCFP
Trigger: AGGGAAGCACGTAAGGCCCCAAATCCCTGGGAGAAA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTCTGTCCTCAGGAGCCTaGTCTGAGTCTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PKLHTVWVGSILTVLPLSLSSGA*SESLLW
Trigger: CCAGAGCAGAGACTCAGACCAGGCTCCTGAGGACAG...AGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTCTGCTATCTGCCATCTaGTGCAGGTTCAGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPLLSAI*CRFSSV
Trigger: GACGGAGCTGAACCTGCACCAGATGGCAGATAGCAG...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCACCCAGGTGGTAGATaGCTGCCAGGACCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTHPGGR*LPGPAK
Trigger: TTTGGCGGGTCCTGGCAGCCATCTACCACCTGGGTG...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTATGATCTGTCGAAGGTaGTGCTTGAAGGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSMICRR*CLKVAV
Trigger: CACGGCCACCTTCAAGCACCACCTTCGACAGATCAT...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGCAGCTCCCGTTTATaGTCCTGTAGCATCTCCACC +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRSSSRL*SCSIST
Trigger: GGTGGAGATGCTACAGGACCATAAACGGGAGCTGCT...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp ACAGCCACATTCTTCTGGATGCACTGTGCAGCCAGTCGGCGAATCTTCAGCTTCATGGTGTTTTCCTGCTaGCTCTGGATTTTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TATFFWMHCAASRRIFSFMVFSC*LWIFCC
Trigger: GCAACAGAAAATCCAGAGCCAGCAGGAAAACACCAT...GAAGCTGAAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTTCCTCACGGTCCTTCTaGTGCATCTGCTTCATCCGC +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPSSRSF*CICFIR
Trigger: GCGGATGAAGCAGATGCACCAGAAGGACCGTGAGGA...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAATCCCGATGGCCAATCTaGTCACAGAGGGTTCCGATC +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQSRWPI*SQRVPI
Trigger: GATCGGAACCCTCTGTGACCAGATTGGCCATCGGGA...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTCACTCTGCTCCAGCTaGCTGTGCACTTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PQTTHSLGWFYSNSPTPISLCSS*LCTFSS
Trigger: GCTGGAGAAAGTGCACAGCCAGCTGGAGCAGAGTGA...GATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp CCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCGTCTCCAGGTCTGTCTaGAGGGTTTGCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: PQTTHSLGWFYSNSPTPIVSRSV*RVCLTA
Trigger: AGCAGTGAGGCAAACCCTCCAGACAGACCTGGAGAC...GATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAACGGCAATCCGCCGAATaGATGTCTCCAGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQRQSAE*MSPGLS
Trigger: AGACAGACCTGGAGACATCCATTCGGCGGATTGCCG...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTGGGCTTCCGGATAGCTaGGAGGAAGTCATCGAAGTC +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPGLPDS*EEVIEV
Trigger: GACTTCGATGACTTCCTCCCAGCTATCCGGAAGCCC...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp CAGTTTCTCTCCATATGCAATGCAAGTGGACTCCACTATTCTGAAGGTCTCTTCCGTCTTGCCCACCTTTaGCTGATCCAGCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QFLSICNASGLHYSEGLFRLAHL*LIQPRR
Trigger: CCTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACG...GAAGAGACCTTCAGAATAGTGGAGTCCACTTGCATTGCATATGGAGAGAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGTCACCCGCAAGTCGTaGGATTCCTGGTCGACTTTT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRVTRKS*DSWSTF
Trigger: AAAAGTCGACCAGGAATCCCACGACTTGCGGGTGAC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCCCACTCCTGTCATCTTaGGCCCTGAGCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFPLLSS*ALSWFP
Trigger: AGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGG...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTTACTCGATGCGCATCTaGGCCACCTGCAGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPYSMRI*ATCSCS
Trigger: AGAACAACTGCAGGTGGCTCAGATGCGCATCGAGTA...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTCTGAAGAGATGCATTTaGGGCTGGTGGACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSLKRCI*GWWTSR
Trigger: TCTTGAGGTCCACCAGCCTCAAATGCATCTCTTCAG...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACTGAAGAGATGCATTTaGGGCTGGTGGACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASLKRCI*GWWTSR
Trigger: TCTTGAGGTCCACCAGCCTCAAATGCATCTCTTCAG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACAGCCAGACTTTCTCTaGCTCATACCATCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASQPDFL*LIPSVL
Trigger: GAGGACAGATGGTATGAGGCAGAGAAAGTCTGGCTG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCCCACATTCTTCTGGATaGACTGTGCAGCCAGTCGGC +
Preference number: 4 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFPHSSG*TVQPVG
Trigger: GCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGG...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAACTCCCCAAGCTTTTaGTCCAGCTCTTTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASNSPSF*SSSFLA
Trigger: AGCCAGGAAAGAGCTGGAGCAAAAGCTTGGGGAGTT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTCCGCCTTCTCAAACTaGAGCCTGTACAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PQTTHSLGWFYSNSPTPISAFSN*SLYSCS
Trigger: TGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGA...GATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp CCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTTCCTCCAGCTGCAGCTaGAGTTCTTGGATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PKLHTVWVGSILTVLPLSSSSCS*SSWICP
Trigger: TGGGCAGATCCAAGAACTGCAGCTGCAGCTGGAGGA...AGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAATCACTGTCACTGGATaGCACTTCTTCCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASITVTG*HFFQGS
Trigger: GCTGCCTTGGAAGAAGTGGCATCCAGTGACAGTGAT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR GCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCGCTGCCACAATCCACTaGCGTCTGGACACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFAATIH*RLDTLS
Trigger: ACTGAGAGTGTCCAGACGGCAGTGGATTGTGGCAGC...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCTCTCTTTTCGGCCGCTaGTGCCACAATCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTSLFGR*CHNPLP
Trigger: CGGCAGTGGATTGTGGCAGCAGCGGCCGAAAAGAGA...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGATATCGCTGTAGCGTaGAGACAAAGGTCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQDIAVA*RQRSAG
Trigger: ACCAGCGGACCTTTGTCTCCACGCTACAGCGATATC...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACACTGGTGTTCTCCTaGGTCACTTTCTCACGGAGA +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRTLVFS*VTFSRR
Trigger: TCTCCGTGAGAAAGTGACCCAGGAGAACACCAGTGT...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAACACTGGTGTTCTCCTaGGTCACTTTCTCACGGAGA +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGTLVFS*VTFSRR
Trigger: TCTCCGTGAGAAAGTGACCCAGGAGAACACCAGTGT...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCATCATTCAGGTCATCCTaGTCCTCATCGATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASSFRSS*SSSMRF
Trigger: GAAGCGCATCGATGAGGACCAGGATGACCTGAATGA...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCTCTGTGGACTTTCTCTaGACGGCAAGCACTTCGCCG +
Preference number: 4 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFSVDFL*TASTSP
Trigger: CGGCGAAGTGCTTGCCGTCCAGAGAAAGTCCACAGA...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GTAGGAAGAGAAATAGAAGTATACACCCCAAACTACACACAGTTTGGGTTGGTTGGGCCGCTGAAGGACTaGGCAGCTTTTCCCTCGACA +
Preference number: 4 (lower is better)
Translates to: VGREIEVYTPNYTQFGLVGPLKD*AAFPST
Trigger: TGTCGAGGGAAAAGCTGCCCAGTCCTTCAGCGGCCC...AACCAACCCAAACTGTGTGTAGTTTGGGGTGTATACTTCTATTTCTCTTCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp GTAGGAAGAGAAATAGAAGTATACACCCCAAACTACACACAGTTTGGGTTGGTTTGCCCCTCCTTAGTGTaGAGGCCCCAGTCGTCTGGT +
Preference number: 4 (lower is better)
Translates to: VGREIEVYTPNYTQFGLVCPSLV*RPQSSG
Trigger: ACCAGACGACTGGGGCCTCCACACTAAGGAGGGGCA...AACCAACCCAAACTGTGTGTAGTTTGGGGTGTATACTTCTATTTCTCTTCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGCAAACTGGCGGTTCTaGAAAACAAGCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGANWRF*KTSGSF
Trigger: AAAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGCAAACTGGCGGTTCTaGAAAACAAGCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRANWRF*KTSGSF
Trigger: AAAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAATCAGGTGGGCAAACTaGCGGTTCTGGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGIRWAN*RFWKTS
Trigger: GCTTGTTTTCCAGAACCGCCAGTTTGCCCACCTGAT...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTTCGTAGTCGAGGCTTaGGAGTTTCCAGCTGAATGG +
Preference number: 4 (lower is better)
Translates to: LGWFYSNSPTPICTPSTLFVVEA*EFPAEW
Trigger: CCATTCAGCTGGAAACTCCCAAGCCTCGACTACGAA...GAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp CCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGGGCCTTCTCACCATTaGTGCTTGTCATCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PKLHTVWVGSILTVLPLSGPSHH*CLSSAQ
Trigger: CTGAGCAGATGACAAGCATCAATGGTGAGAAGGCCC...AGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCGGGCCTTCTCACCATTaGTGCTTGTCATCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFGPSHH*CLSSAQ
Trigger: CTGAGCAGATGACAAGCATCAATGGTGAGAAGGCCC...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR TCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCACCTCATCCACCTCAGTaGTGGTTTTGTCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASPHPPQ*WFCQHQ
Trigger: TTGATGCTGACAAAACCATCACTGAGGTGGATGAGG...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR TCA 90 bp CCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCTGCAGACGCTTTCTaGGGAACTCGTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: PKLHTVWVGSILTVLPLSAADAF*GTRSPS
Trigger: AGATGGAGAACGAGTTCCTCAGAAAGCGTCTGCAGC...AGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGCCTGGAGATCACACCTaGCTTGAGAAAAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRPGDHT*LEKNLA
Trigger: AGCCAAGTTTTTCTCAAGGCAGGTGTGATCTCCAGG...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCTCCTTGGCTCGGAGCTaGTCAGTTCCAATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTSLARS*SVPMVA
Trigger: TGCCACCATTGGAACTGAGCAGCTCCGAGCCAAGGA...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAAGCAGATCTGTGTTCTaGCGGAGTTCATTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQSRSVF*RSSFRN
Trigger: GTTGCGGAATGAACTCCGGCAGAACACAGATCTGCT...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACCGTTTCAAAGTGGATaGTTGAACGCTGTGAACCGT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGPFQSG*LNAVNR
Trigger: ACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGG...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR GCA 90 bp TGCATGTCTGTGATCCCACCACGGATCTTCTGTCATTATGTGGACAGAACGCCACAGTTTCTCTCCATATaGAATGCAAGTGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: CMSVIPPRIFCHYVDRTPQFLSI*NASGLH
Trigger: GTGGAGTCCACTTGCATTGCATATGGAGAGAAACTG...TGGCGTTCTGTCCACATAATGACAGAAGATCCGTGGTGGGATCACAGACATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CCA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTTTGTCCTTCTTATTCTaGGGACCGTCCCACTTACTC +
Preference number: 4 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSLSFLF*GPSHLL
Trigger: GAGTAAGTGGGACGGTCCCCAGAATAAGAAGGACAA...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATTCCACCACAGGGTTTaGTACCAGGCAGTGGATAAA +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGFHHRV*YQAVDK
Trigger: TTTATCCACTGCCTGGTACCAAACCCTGTGGTGGAA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCGCCTTGAGAAAAACTTaGCTGTGCCCCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTALRKT*LCPTAT
Trigger: GGTGGCTGTGGGGCACAGCCAAGTTTTTCTCAAGGC...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGTGAGCCATCTTCTTaGCCCCGTCATAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQGEPSS*PRHKHF
Trigger: AAAGTGCTTATGACGGGGCCAAGAAGATGGCTCACC...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGCAAACTGGCGGTTCTaGAAAACAAGCGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQANWRF*KTSGSF
Trigger: AAAGGAGCCGCTTGTTTTCCAGAACCGCCAGTTTGC...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAAGTCGTGGGATTCCTaGTCGACTTTTGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASKSWDS*STFDAV
Trigger: GACAGCATCAAAAGTCGACCAGGAATCCCACGACTT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAAGTCGTGGGATTCCTaGTCGACTTTTGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRKSWDS*STFDAV
Trigger: GACAGCATCAAAAGTCGACCAGGAATCCCACGACTT...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAATGCTGTTGGGTTGGCTaGTGGAAATTTCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQCCWVG*WKFLGS
Trigger: AGATCCCAGAAATTTCCATCAGCCAACCCAACAGCA...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATGGACACAGAACTTCTaGAAAGAGGACACAGATCAC +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGWTQNF*KEDTDH
Trigger: GTGATCTGTGTCCTCTTTGCAGAAGTTCTGTGTCCA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR GCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAACCTGGAAGAGAACGATaGTCTGAGATACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQPGRER*SEIPAS
Trigger: AGAAGCTGGTATCTCAGAGCATCGTTCTCTTCCAGG...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAATTCTGGACTTGTTCATaGTTGCTCTTGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQFWTCS*LLLSSW
Trigger: CCAGGAGCTCAAGAGCAAGCATGAACAAGTCCAGAA...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR GCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGCAGCTCAACCAGGACTaGAGGCTGCCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFISFLNACTHLYIHRIEQLNQD*RLPSGW
Trigger: CCAGCCAGAGGGCAGCCTGCAGTCCTGGTTGAGCTG...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTGACTTGCTGTTGGGTTaGCTGATGGAAATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPDLLLG*LMEISG
Trigger: CCCAGAAATTTCCATCAGCCAACCCAACAGCAAGTC...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TATACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCAGGGGACAGTCTTTTTaGTTGGTGTCGCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: YTPQTTHSLGWFYSNSPTRGQSF*LVSHWS
Trigger: GCTCCAGTGCGACACCAACCAAAAAGACTGTCCCCT...GGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCTGCAGCTGCAGTTCTTaGATCTGCCCAATGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFCSCSS*ICPMSA
Trigger: TGCTGACATTGGGCAGATCCAAGAACTGCAGCTGCA...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CCA 90 bp GTAGGAAGAGAAATAGAAGTATACACCCCAAACTACACACAGTTTGGGTTGGTTCGGCAATCCGCCGAATaGATGTCTCCAGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VGREIEVYTPNYTQFGLVRQSAE*MSPGLS
Trigger: AGACAGACCTGGAGACATCCATTCGGCGGATTGCCG...AACCAACCCAAACTGTGTGTAGTTTGGGGTGTATACTTCTATTTCTCTTCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp CAACTTGGCCCTTTGCATGTCTGTGATCCCACCACGGATCTTCTGTCATTATGTTCTTCTGTCATTATGTaGACAGAACGCCATCACAGC +
Preference number: 4 (lower is better)
Translates to: QLGPLHVCDPTTDLLSLCSSVIM*TERHHS
Trigger: GCTGTGATGGCGTTCTGTCCACATAATGACAGAAGA...ACATAATGACAGAAGATCCGTGGTGGGATCACAGACATGCAAAGGGCCAAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
3UTR CAA 72 bp AGGGAGGAAGGGCAGCAAGTAGTTACTTATCCTGCATaGTTGCTCTGTGATTTTTGTACTTGTTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: REEGQQVVTYPA*LLCDFCTCSLP
Trigger: GGGGAGGGAACAAGTACAAAAATCACAGAGCAACAATGCAGGATAAGTAACTACTTGCTGCCCTTCCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR TCA 90 bp GTAGGAAGAGAAATAGAAGTATACACCCCAAACTACACACAGTTTGGGTTGGTTAACTCGTTCTCCATCTaGGCACAGTCGAAGCGCATC +
Preference number: 4 (lower is better)
Translates to: VGREIEVYTPNYTQFGLVNSFSI*AQSKRI
Trigger: GATGCGCTTCGACTGTGCTCAGATGGAGAACGAGTT...AACCAACCCAAACTGTGTGTAGTTTGGGGTGTATACTTCTATTTCTCTTCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGGTCCCCCGGACCAGTTaGTTAATGAAGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SFISFLNACTHLYIHRIEVPRTS*LMKPPG
Trigger: CCCAGGGGGCTTCATTAAGCAACTGGTCCGGGGGAC...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGTCCAGCACCTGGAATTaGCGGCGGAAGCGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: SFISFLNACTHLYIHRIESSTWN*RRKRVS
Trigger: GCTCACTCGCTTCCGCCGGCAATTCCAGGTGCTGGA...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp CCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTCCTGGAGATCACACCTaGCTTGAGAAAAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: PKLHTVWVGSILTVLPLSPGDHT*LEKNLA
Trigger: AGCCAAGTTTTTCTCAAGGCAGGTGTGATCTCCAGG...AGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp ATCACCAGGACCTCAAATCTCTTAATCTGCACCTTCTGGAACTCTGTCTTGTTCTTCTGGACTTGTTCATaGTTGCTCTTGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ITRTSNLLICTFWNSVLFFWTCS*LLLSSW
Trigger: CCAGGAGCTCAAGAGCAAGCATGAACAAGTCCAGAA...GAACAAGACAGAGTTCCAGAAGGTGCAGATTAAGAGATTTGAGGTCCTGGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR GCA 90 bp CCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCAAGCCTTCCAAATCTTaGTTCTCATGGAGGACCATC +
Preference number: 4 (lower is better)
Translates to: PQTTHSLGWFYSNSPTPIKPSKS*FSWRTI
Trigger: GATGGTCCTCCATGAGAAGCAAGATTTGGAAGGCTT...GATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp CCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTAGGTCCTTGTGCTTCTaGATCAGCTCATTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PKLHTVWVGSILTVLPLSRSLCF*ISSFRS
Trigger: TGACCTGAATGAGCTGATGCAGAAGCACAAGGACCT...AGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATCTTCCGTTTCAAAGTaGATGCTTGAACGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGSSVSK*MLERCE
Trigger: TTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR TCA 90 bp CAAGTAGTTACTTATCCTGCATTGTTGCTCTGTGATTTTTGTACTTGTTCCCTCCCCTTTGCATGTCTGTaGTCCCACCACGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: QVVTYPALLLCDFCTCSLPFACL*SHHGSS
Trigger: AGAAGATCCGTGGTGGGATCACAGACATGCAAAGGG...GAGGGAACAAGTACAAAAATCACAGAGCAACAATGCAGGATAAGTAACTACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR GCA 90 bp GTAGGAAGAGAAATAGAAGTATACACCCCAAACTACACACAGTTTGGGTTGGTTGGCCCAAACGTCATTTaGTGGATGATCTGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: VGREIEVYTPNYTQFGLVGPNVI*WMICRR
Trigger: CCTTCGACAGATCATCCAGCAAATGACGTTTGGGCC...AACCAACCCAAACTGTGTGTAGTTTGGGGTGTATACTTCTATTTCTCTTCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGAGGGAACCAAGCAGCTaGCACCATGGCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SFISFLNACTHLYIHRIEREPSS*HHGQSL
Trigger: CAAGGACTGGCCATGGTGGCAGCTGCTTGGTTCCCT...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGGTATTTCTTCATTATaGTCGCAACATCGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGGISSL*SQHRRL
Trigger: AAGACGACGATGTTGCGAGCATAATGAAGAAATACC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGCCTCTTTCAGCTCTGTaGTCTTGGGGGTCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SFISFLNACTHLYIHRIEPLSAL*SWGSQA
Trigger: GGCTTGGGACCCCCAAGACCACAGAGCTGAAAGAGG...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp GTAGGAAGAGAAATAGAAGTATACACCCCAAACTACACACAGTTTGGGTTGGTTGGTGAGCCATCTTCTTaGCCCCGTCATAAGCACTTT +
Preference number: 4 (lower is better)
Translates to: VGREIEVYTPNYTQFGLVGEPSS*PRHKHF
Trigger: AAAGTGCTTATGACGGGGCCAAGAAGATGGCTCACC...AACCAACCCAAACTGTGTGTAGTTTGGGGTGTATACTTCTATTTCTCTTCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGGAGGCGACAGCTAACTaGTTCCTCTGTCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: SFISFLNACTHLYIHRIEEATAN*FLCLAS
Trigger: GGAAGCGAGACAGAGGAAGCAGTTAGCTGTCGCCTC...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAATCAAGTCAGCAATCTTaGTTTCTAGCAGATCTGTGT +
Preference number: 4 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQSSQQS*FLADLC
Trigger: ACACAGATCTGCTAGAAAGCAAGATTGCTGACTTGA...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGATCTGCAGCTTGATCTaGGAGCACGGGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SFISFLNACTHLYIHRIEICSLI*EHGAFL
Trigger: GAGGAAAGCCCCGTGCTCCCAGATCAAGCTGCAGAT...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGTCTTGCTGTGGACATTaGTGGACCGGGCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SFISFLNACTHLYIHRIESCCGH*WTGLCS
Trigger: TGAGCAGAGCCCGGTCCACCAATGTCCACAGCAAGA...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR TCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGACTTCCTGGAGGAAGTaGGCTGAAACTGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SFISFLNACTHLYIHRIETSWRK*AETGQV
Trigger: CACTTGGCCAGTTTCAGCTCACTTCCTCCAGGAAGT...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR GCA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACTTATCCTGCATTGTTaGTCTGTGATTTTTGTACTT +
Preference number: 4 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGLILHC*SVIFVL
Trigger: AAGTACAAAAATCACAGAGCAACAATGCAGGATAAG...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGGGGTCCCATCCCAACTaGTGGAAAATCTCACACTGG +
Preference number: 4 (lower is better)
Translates to: SFISFLNACTHLYIHRIEGSHPN*WKISHW
Trigger: CCAGTGTGAGATTTTCCACCAGTTGGGATGGGACCC...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp CAAGTAGTTACTTATCCTGCATTGTTGCTCTGTGATTTTTGTACTTGTTCCCTCAAGTCGTGGGATTCCTaGTCGACTTTTGATGCTGTC +
Preference number: 4 (lower is better)
Translates to: QVVTYPALLLCDFCTCSLKSWDS*STFDAV
Trigger: GACAGCATCAAAAGTCGACCAGGAATCCCACGACTT...GAGGGAACAAGTACAAAAATCACAGAGCAACAATGCAGGATAAGTAACTACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR TCA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGACGTCATTTGCTGGATaGTCTGTCGAAGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SFISFLNACTHLYIHRIETSFAG*SVEGGA
Trigger: AGCACCACCTTCGACAGATCATCCAGCAAATGACGT...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp GTAGGAAGAGAAATAGAAGTATACACCCCAAACTACACACAGTTTGGGTTGGTTTTCTTCTCCAGCTCATaGTTTCGACTTTGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: VGREIEVYTPNYTQFGLVFFSSS*FRLCWF
Trigger: GAACCAACAAAGTCGAAACCATGAGCTGGAGAAGAA...AACCAACCCAAACTGTGTGTAGTTTGGGGTGTATACTTCTATTTCTCTTCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CCA 90 bp CAAGTAGTTACTTATCCTGCATTGTTGCTCTGTGATTTTTGTACTTGTTCCCTCACTGGTTCCTACTTCTaGAGGTATTTCTTCATTATG +
Preference number: 4 (lower is better)
Translates to: QVVTYPALLLCDFCTCSLTGSYF*RYFFIM
Trigger: CATAATGAAGAAATACCTCCAGAAGTAGGAACCAGT...GAGGGAACAAGTACAAAAATCACAGAGCAACAATGCAGGATAAGTAACTACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CAA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACGTGGCCGCCCGGTCCTaGCCCTGGTGCCGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHVAARS*PWCRGF
Trigger: GAACCCCCGGCACCAGGGCAAGGACCGGGCGGCCAC...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS CCA 90 bp GGTCTCTCCGCTGGTTCAGCAGCGCCCAGTATGCCCGCTGTGCCATaGAGCCAATGTGGGCAGGCAGGCCATCCCGGCGGCCCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: GLSAGSAAPSMPAVP*SQCGQAGHPGGPWA
Trigger: TGCCCAAGGGCCGCCGGGATGGCCTGCCTGCCCACATTGGCTCCATGGCACAGCGGGCATACTGGGCGCTGCTGAACCAGCGGAGAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATGTGGCCGCCCGGTCCTaGCCCTGGTGCCGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHVAARS*PWCRGF
Trigger: GAACCCCCGGCACCAGGGCAAGGACCGGGCGGCCAC...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTCCAGGGCCGAGAGGTaGGGCTTGGCTCTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGSRAER*GLALWS
Trigger: GCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGGA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS CCA 90 bp TGGTTCAGCAGCGCCCAGTATGCCCGCTGTGCCATGGAGCCAATGTaGGCAGGCAGGCCATCCCGGCGGCCCTTGGGCACCTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: WFSSAQYARCAMEPM*AGRPSRRPLGTFPA
Trigger: TGCAGGGAAGGTGCCCAAGGGCCGCCGGGATGGCCTGCCTGCCCACATTGGCTCCATGGCACAGCGGGCATACTGGGCGCTGCTGAACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS-3UTR CAA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTGCTTCCGACCCACTTaGCAGGCCCCCGCCGCACCC +
Preference number: 5 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWCFRPT*QAPAAP
Trigger: GGGTGCGGCGGGGGCCTGCAAAGTGGGTCGGAAGCA...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS CCA 90 bp CAGGTGGTCTTCCCAGCGCCACTCCAGCCCAGGGCCACAATGCTCTaGTCTCTCCGCTGGTTCAGCAGCGCCCAGTATGCCCGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: QVVFPAPLQPRATML*SLRWFSSAQYARCA
Trigger: GGCACAGCGGGCATACTGGGCGCTGCTGAACCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCTGGAGTGGCGCTGGGAAGACCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS-3UTR CAA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGGACCCCTCGCTCTCCTaGCCCAGAATGTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGDPSLS*PRMSEL
Trigger: GAGCTCAGACATTCTGGGCAAGGAGAGCGAGGGGTC...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACTGCTCTGGCCTCCTTaGCCCTCCTCCTGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSLLWPP*PSSCGA
Trigger: AGCCCCGCAGGAGGAGGGCAAAGGAGGCCAGAGCAG...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCACTGCTCTGGCCTCCTTaGCCCTCCTCCTGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: VDRALLSANADWVLSVSPLLWPP*PSSCGA
Trigger: AGCCCCGCAGGAGGAGGGCAAAGGAGGCCAGAGCAG...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCCCATCCCGGCGGCCCTaGGGCACCTTCCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLPSRRP*GTFPAE
Trigger: TTCTGCAGGGAAGGTGCCCAAGGGCCGCCGGGATGG...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCTGCTTCCGACCCACTTaGCAGGCCCCCGCCGCACCC +
Preference number: 5 (lower is better)
Translates to: QHPRRICLCGLISPLEGGCFRPT*QAPAAP
Trigger: GGGTGCGGCGGGGGCCTGCAAAGTGGGTCGGAAGCA...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGTCCAGCACCTGGAATaGCCGGCGGAAGCGAGTGAG +
Preference number: 5 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRVQHLE*PAEASE
Trigger: CTCACTCGCTTCCGCCGGCAATTCCAGGTGCTGGAC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGCTCCTCCCCCATCTaGATCAGGCTGTCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGSSSPI*IRLSRS
Trigger: GCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGCT...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS GCA 90 bp GGCCACAATGCTCTGGTCTCTCCGCTGGTTCAGCAGCGCCCAGTATaGCCGCTGTGCCATGGAGCCAATGTGGGCAGGCAGGCCATCCCG +
Preference number: 5 (lower is better)
Translates to: GHNALVSPLVQQRPV*PLCHGANVGRQAIP
Trigger: CGGGATGGCCTGCCTGCCCACATTGGCTCCATGGCACAGCGGGCATACTGGGCGCTGCTGAACCAGCGGAGAGACCAGAGCATTGTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS GCA 90 bp CACAGCAGGTGGTCTTCCCAGCGCCACTCCAGCCCAGGGCCACAATaGTCTGGTCTCTCCGCTGGTTCAGCAGCGCCCAGTATGCCCGCT +
Preference number: 5 (lower is better)
Translates to: HSRWSSQRHSSPGPQ*SGLSAGSAAPSMPA
Trigger: AGCGGGCATACTGGGCGCTGCTGAACCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCTGGAGTGGCGCTGGGAAGACCACCTGCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 90 bp CCAGCGCCACTCCAGCCCAGGGCCACAATGCTCTGGTCTCTCCGCTaGTTCAGCAGCGCCCAGTATGCCCGCTGTGCCATGGAGCCAATG +
Preference number: 5 (lower is better)
Translates to: PAPLQPRATMLWSLR*FSSAQYARCAMEPM
Trigger: CATTGGCTCCATGGCACAGCGGGCATACTGGGCGCTGCTGAACCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCTGGAGTGGCGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS-3UTR CAA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGCGCCCTGCACTTGGCTaGTCTTCTCCATCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGRPALG*SSPSGS
Trigger: AGACCCAGATGGAGAAGACAAGCCAAGTGCAGGGCG...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGAGCTCCTCCCCCATCTaGATCAGGCTGTCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRSSSPI*IRLSRS
Trigger: GCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGCT...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CCCTGGCTCTCTCCGCTCGGGGGACGTTCGCTCGCCACCGTCACCCGCAAGTCGTGGGGAGAAACAGGCTaGTCTCCTGAGGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PWLSPLGGRSLATVTRKSWGETG*SPEVLL
Trigger: CAGCAAGACCTCAGGAGACAAGCCTGTTTCTCCCCA...CGACTTGCGGGTGACGGTGGCGAGCGAACGTCCCCCGAGCGGAGAGAGCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS TCA 90 bp TGGTTGGTGTCGCACTGGAGCCCAGCTCCTGGGCCTTCTCACCATTaGTGCTTGTCATCTGCTCAGGGTCGGGGCTGCGGGACCCCTCGC +
Preference number: 5 (lower is better)
Translates to: WLVSHWSPAPGPSHH*CLSSAQGRGCGTPR
Trigger: GCGAGGGGTCCCGCAGCCCCGACCCTGAGCAGATGACAAGCATCAATGGTGAGAAGGCCCAGGAGCTGGGCTCCAGTGCGACACCAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS TCA 90 bp GTAGATGGCTGCCAGGACCCGCCAAACAGCCCGCTGCTCGCTCTCTaGGATGCCGAGCATCTCCATGGCACCCTGGAGCTGGGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: VDGCQDPPNSPLLAL*DAEHLHGTLELGKG
Trigger: GCCTTTGCCCAGCTCCAGGGTGCCATGGAGATGCTCGGCATCTCAGAGAGCGAGCAGCGGGCTGTTTGGCGGGTCCTGGCAGCCATCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
CDS GCA 90 bp CTGGAGCCCAGCTCCTGGGCCTTCTCACCATTGATGCTTGTCATCTaGTCAGGGTCGGGGCTGCGGGACCCCTCGCTCTCCTTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: LEPSSWAFSPLMLVI*SGSGLRDPSLSLPR
Trigger: TCTGGGCAAGGAGAGCGAGGGGTCCCGCAGCCCCGACCCTGAGCAGATGACAAGCATCAATGGTGAGAAGGCCCAGGAGCTGGGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS GCA 90 bp GCACCGAGGGCCCCCGGGGCTGGAGGACAATCAGATCAGGCCCTGTaGAGGTGTGCAGCAGCTGAGCTTTGTAGCGCTGCAGAAGCGTGT +
Preference number: 5 (lower is better)
Translates to: APRAPGAGGQSDQAL*RCAAAELCSAAEAC
Trigger: ACACGCTTCTGCAGCGCTACAAAGCTCAGCTGCTGCACACCTGCACAGGGCCTGATCTGATTGTCCTCCAGCCCCGGGGGCCCTCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 90 bp GACACAGATCACAGGAACCACGACTGTCTAAGACGTCTCCCCGGGTaGCCGCGAAGGGACCCCACCGAGCCGGGAAAGCAGGAGCGAAGG +
Preference number: 5 (lower is better)
Translates to: DTDHRNHDCLRRLPG*PRRDPTEPGKQERR
Trigger: CCTTCGCTCCTGCTTTCCCGGCTCGGTGGGGTCCCTTCGCGGCCACCCGGGGAGACGTCTTAGACAGTCGTGGTTCCTGTGATCTGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000536101.5
CDS-3UTR CAA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCAGTCCCCCGGACCAGTaGCTTAATGAAGCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGSPPDQ*LNEAPW
Trigger: CCAGGGGGCTTCATTAAGCAACTGGTCCGGGGGACT...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCGGGGCTGGCCCGTCTaGGTTCTCCTTCCGTATCCG +
Preference number: 5 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHRGWPV*VLLPYP
Trigger: CGGATACGGAAGGAGAACCAAGACGGGCCAGCCCCG...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATCCATCCCGGCGGCCCTaGGGCACCTTCCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: HPRRICLCGLISPLEGGHPSRRP*GTFPAE
Trigger: TTCTGCAGGGAAGGTGCCCAAGGGCCGCCGGGATGG...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGATGCGGCCTGTAGCGTaGAAGTCCAGCGACATCACC +
Preference number: 5 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRMRPVA*KSSDIT
Trigger: GGTGATGTCGCTGGACTTCAACGCTACAGGCCGCAT...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCGAGGCCCCATCGGCTaGGCCCAAACGTCATTTGCT +
Preference number: 5 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGRGPIG*AQTSFA
Trigger: AGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTCG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTCCACTCCTGTCATCTaGAGCCCTGAGCTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGSTPVI*SPELVS
Trigger: GGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGTCCAGGGCCGAGAGGTaGGGCTTGGCTCTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGSRAER*GLALWS
Trigger: GCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGGA...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCCACACAGGAGGCAGCTaGGCCCGGGCCTGGAATAGA +
Preference number: 5 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLHTGGS*ARAWNR
Trigger: TCTATTCCAGGCCCGGGCCAAGCTGCCTCCTGTGTG...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACACAGGAGGCAGCTaGGCCCGGGCCTGGAATAGA +
Preference number: 5 (lower is better)
Translates to: QANHTGSPASPQDMPLWAHTGGS*ARAWNR
Trigger: TCTATTCCAGGCCCGGGCCAAGCTGCCTCCTGTGTG...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTGCCTTGAGAAAAACTaGGCTGTGCCCCACAGCCAC +
Preference number: 5 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGCLEKN*AVPHSH
Trigger: GTGGCTGTGGGGCACAGCCAAGTTTTTCTCAAGGCA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGCACCATGGCCAGTCCTaGACTGCGAGGAACACAGCC +
Preference number: 5 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPHHGQS*TARNTA
Trigger: GGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGTG...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCCTGCTTCCGACCCACTaGGACCACACGCCCATGCCA +
Preference number: 5 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFLLPTH*DHTPMP
Trigger: TGGCATGGGCGTGTGGTCCAAGTGGGTCGGAAGCAG...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS CCA 90 bp AAGTCCAGCGACATCACCATGGAGAACCGGGTGGCACTGCGGCTGTaGGCCATGGACACAGAGCCGAAGGCCCGGAGGACAGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: KSSDITMENRVALRL*AMDTEPKARRTVKV
Trigger: CACCTTCACTGTCCTCCGGGCCTTCGGCTCTGTGTCCATGGCCCACAGCCGCAGTGCCACCCGGTTCTCCATGGTGATGTCGCTGGACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS-3UTR CAA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAGACCCCTCGCTCTCCTaGCCCAGAATGTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: VDRALLSANADWVLSVSPDPSLS*PRMSEL
Trigger: GAGCTCAGACATTCTGGGCAAGGAGAGCGAGGGGTC...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCGGGGCTGGCCCGTCTaGGTTCTCCTTCCGTATCCG +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLRGWPV*VLLPYP
Trigger: CGGATACGGAAGGAGAACCAAGACGGGCCAGCCCCG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCGAGGCCCCATCGGCTaGGCCCAAACGTCATTTGCT +
Preference number: 5 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWRGPIG*AQTSFA
Trigger: AGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTCG...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGCATCCATCTGCAGCTaGATCTGGGAGCACGGGGCT +
Preference number: 5 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSASICS*IWEHGA
Trigger: AGCCCCGTGCTCCCAGATCAAGCTGCAGATGGATGC...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGTGCAGCCGGGACCTTTaGATCATGCTGGTCAGCGCA +
Preference number: 5 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPCSRDL*IMLVSA
Trigger: TGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCA...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAGCCTCTCCTCGCATaGCTGCAGACGCTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGQPLLA*LQTLSE
Trigger: CTCAGAAAGCGTCTGCAGCAATGCGAGGAGAGGCTG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTTTCGGGGAGTAGGGTaGTGCCCCCAACACCGTCTG +
Preference number: 5 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLFRGVG*CPQHRL
Trigger: CAGACGGTGTTGGGGGCACAACCCTACTCCCCGAAA...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CAA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTTTCGGGGAGTAGGGTaGTGCCCCCAACACCGTCTG +
Preference number: 5 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWFRGVG*CPQHRL
Trigger: CAGACGGTGTTGGGGGCACAACCCTACTCCCCGAAA...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CAA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCCGTCTTGCCCACCTTaGGCTGATCCAGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHPSCPP*ADPAKE
Trigger: CTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACGG...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGTCTTGCCCACCTTaGGCTGATCCAGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPPSCPP*ADPAKE
Trigger: CTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACGG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS CCA 90 bp CTGCTCTGGCCTCCTTTGCCCTCCTCCTGCGGGGCTGGCCCGTCTTaGTTCTCCTTCCGTATCCGAGGCCTTTCTGCATCCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LLWPPLPSSCGAGPS*FSFRIRGLSASFSR
Trigger: TCTGGAGAAGGATGCAGAAAGGCCTCGGATACGGAAGGAGAACCAAGACGGGCCAGCCCCGCAGGAGGAGGGCAAAGGAGGCCAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATAGTCCCCCGGACCAGTaGCTTAATGAAGCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHSPPDQ*LNEAPW
Trigger: CCAGGGGGCTTCATTAAGCAACTGGTCCGGGGGACT...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCGTGCCACTGCTGGACTaGCTGTTGGGTTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLVPLLD*LLGWLM
Trigger: CATCAGCCAACCCAACAGCAAGTCCAGCAGTGGCAC...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGTGCCACTGCTGGACTaGCTGTTGGGTTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSVPLLD*LLGWLM
Trigger: CATCAGCCAACCCAACAGCAAGTCCAGCAGTGGCAC...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGAGCTCCCAGGAGAGCTaGACTGGTCGTCCTGAGAGA +
Preference number: 5 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWSSQES*TGRPER
Trigger: TCTCTCAGGACGACCAGTCAAGCTCTCCTGGGAGCT...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGGACCCCTCGCTCTCCTaGCCCAGAATGTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGDPSLS*PRMSEL
Trigger: GAGCTCAGACATTCTGGGCAAGGAGAGCGAGGGGTC...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAGAGTCCGGGTCCAGCTaGGCCACCATCAACAACACA +
Preference number: 5 (lower is better)
Translates to: VDRALLSANADWVLSVSPESGSS*ATINNT
Trigger: TGTGTTGTTGATGGTGGCCAAGCTGGACCCGGACTC...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTGGCGACTCCACCATaGTGCTCACCTCCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ANHTGSPASPQDMPLWAHLATPP*CSPPLG
Trigger: CCCCAAAGGAGGTGAGCACAATGGTGGAGTCGCCAG...ATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGCCATCCCGGCGGCCCTaGGGCACCTTCCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVPSRRP*GTFPAE
Trigger: TTCTGCAGGGAAGGTGCCCAAGGGCCGCCGGGATGG...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGTGTTTATCTTCAGGCTaGGACCACACGCCCATGCCA +
Preference number: 5 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRCLSSG*DHTPMP
Trigger: TGGCATGGGCGTGTGGTCCAAGCCTGAAGATAAACA...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATGTGGCCGCCCGGTCCTaGCCCTGGTGCCGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: SGDVFVLREARGEEAGSNVAARS*PWCRGF
Trigger: GAACCCCCGGCACCAGGGCAAGGACCGGGCGGCCAC...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCGCAGCTCCTCTCTTTTaGACTGGTGCAGGACCTGGG +
Preference number: 5 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLAAPLF*TGAGPG
Trigger: CCCAGGTCCTGCACCAGTCAAAAAGAGAGGAGCTGC...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGGTCCAGCACCTGGAATaGCCGGCGGAAGCGAGTGAG +
Preference number: 5 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMVQHLE*PAEASE
Trigger: CTCACTCGCTTCCGCCGGCAATTCCAGGTGCTGGAC...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCCGAGACAGAAAGCCCTaGCAAGCCGCCTGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLRDRKP*QAAWKR
Trigger: TCTCTTCCAGGCGGCTTGCAAGGGCTTTCTGTCTCG...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCATGTTCATGCTTGCTCTaGAGCTCCTGGACCTCCCGG +
Preference number: 5 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPCSCLL*SSWTSR
Trigger: CCGGGAGGTCCAGGAGCTCAAGAGCAAGCATGAACA...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCAGCCTCTCCTCGCATaGCTGCAGACGCTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHQPLLA*LQTLSE
Trigger: CTCAGAAAGCGTCTGCAGCAATGCGAGGAGAGGCTG...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGGCTCTGGATTTTCTGTaGCTCAAGGGCGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRALDFL*LKGAGF
Trigger: GAATCCAGCGCCCTTGAGCAACAGAAAATCCAGAGC...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCAAGGCCTCCTCACACTaGGCTTCACTCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLKASSH*ASLCSS
Trigger: GCTGGAGCAGAGTGAAGCCAAGTGTGAGGAGGCCTT...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGTGGGGAGAAACAGGCTaGTCTCCTGAGGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPWGETG*SPEVLL
Trigger: CAGCAAGACCTCAGGAGACAAGCCTGTTTCTCCCCA...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CAA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGTTTCGGGGAGTAGGGTaGTGCCCCCAACACCGTCTG +
Preference number: 5 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGFRGVG*CPQHRL
Trigger: CAGACGGTGTTGGGGGCACAACCCTACTCCCCGAAA...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS GCA 90 bp ATCCCAGGACTCACCTGCCTTCCCAGTCGTGCTCCGAAGCTCACCTaGTTTCTCCCCCATTCTCAGATCGTCCCCCAACTCGCCCTGCAC +
Preference number: 5 (lower is better)
Translates to: IPGLTCLPSRAPKLT*FLPHSQIVPQLALH
Trigger: GTGCAGGGCGAGTTGGGGGACGATCTGAGAATGGGGGAGAAAGCAGGTGAGCTTCGGAGCACGACTGGGAAGGCAGGTGAGTCCTGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 90 bp GCCAAACAGCCCGCTGCTCGCTCTCTGAGATGCCGAGCATCTCCATaGCACCCTGGAGCTGGGCAAAGGCAGCTGCCGCCTTCTGTTTAT +
Preference number: 5 (lower is better)
Translates to: AKQPAARSLRCRASP*HPGAGQRQLPPSVY
Trigger: ATAAACAGAAGGCGGCAGCTGCCTTTGCCCAGCTCCAGGGTGCCATGGAGATGCTCGGCATCTCAGAGAGCGAGCAGCGGGCTGTTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
CDS-3UTR CAA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCAGATGGTGGAGGGCTCTaGTCCTCTTCCCGAATCTTC +
Preference number: 5 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSDGGGL*SSSRIF
Trigger: GAAGATTCGGGAAGAGGACAAGAGCCCTCCACCATC...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCGATGGTGGAGGGCTCTaGTCCTCTTCCCGAATCTTC +
Preference number: 5 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLDGGGL*SSSRIF
Trigger: GAAGATTCGGGAAGAGGACAAGAGCCCTCCACCATC...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCAGTGCCACTGCTGGACTaGCTGTTGGGTTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: EDAVWATTACPWVWSESSVPLLD*LLGWLM
Trigger: CATCAGCCAACCCAACAGCAAGTCCAGCAGTGGCAC...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTCTTTCTCCCAGGGATTaGGGGCCTTACGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: PRRICLCGLISPLEGGHALSPRD*GPYVLP
Trigger: GGGAAGCACGTAAGGCCCCAAATCCCTGGGAGAAAG...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCTTGTGCTCACCTCCTTaGGGGCTTCACAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLLCSPP*GLHSPS
Trigger: AGAAGGGCTGTGAAGCCCCAAAGGAGGTGAGCACAA...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCCTGGCGACTCCACCATaGTGCTCACCTCCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGLATPP*CSPPLG
Trigger: CCCCAAAGGAGGTGAGCACAATGGTGGAGTCGCCAG...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCAGGACACTGGATTCGTaGACACTGATGAGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGRTLDS*TLMREA
Trigger: GGCCTCTCTCATCAGTGTCAACGAATCCAGTGTCCT...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGATGCGGCCTGTAGCGTaGAAGTCCAGCGACATCACC +
Preference number: 5 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGMRPVA*KSSDIT
Trigger: GGTGATGTCGCTGGACTTCAACGCTACAGGCCGCAT...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCTGTCGAAGGTGGTGCTaGAAGGTGGCCGTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: QHPRRICLCGLISPLEGGCRRWC*KVAVFS
Trigger: GCTGAACACGGCCACCTTCAAGCACCACCTTCGACA...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGTGTCGAAGGTGGTGCTaGAAGGTGGCCGTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGCRRWC*KVAVFS
Trigger: GCTGAACACGGCCACCTTCAAGCACCACCTTCGACA...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGTCCACTCCTGTCATCTaGAGCCCTGAGCTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWSTPVI*SPELVS
Trigger: GGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGA...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGTGCAGCCGGGACCTTTaGATCATGCTGGTCAGCGCA +
Preference number: 5 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLCSRDL*IMLVSA
Trigger: TGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCA...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGCGAGACAGAAAGCCCTaGCAAGCCGCCTGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: GAQHPRRICLCGLISPLERDRKP*QAAWKR
Trigger: TCTCTTCCAGGCGGCTTGCAAGGGCTTTCTGTCTCG...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCACCATGGCCAGTCCTaGACTGCGAGGAACACAGCC +
Preference number: 5 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSHHGQS*TARNTA
Trigger: GGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGTG...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATCACCATGGCCAGTCCTaGACTGCGAGGAACACAGCC +
Preference number: 5 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHHHGQS*TARNTA
Trigger: GGCTGTGTTCCTCGCAGTCAAGGACTGGCCATGGTG...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCAGGCCACATCACCTTaGAAGCGCTCATCGGCAAGG +
Preference number: 5 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGQATSP*KRSSAR
Trigger: CCTTGCCGATGAGCGCTTCAAAGGTGATGTGGCCTG...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCAGGCCACATCACCTTaGAAGCGCTCATCGGCAAGG +
Preference number: 5 (lower is better)
Translates to: QHPRRICLCGLISPLEGGQATSP*KRSSAR
Trigger: CCTTGCCGATGAGCGCTTCAAAGGTGATGTGGCCTG...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGCACTTCCTCTTCAGTaGGTGAGCCATCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPALPLQ*VSHLLG
Trigger: GCCAAGAAGATGGCTCACCAACTGAAGAGGAAGTGC...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACAGCTGCTCCAGCTGCTaGATGGTGTTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHSCSSC*MVFSCW
Trigger: CCAGCAGGAAAACACCATCAAGCAGCTGGAGCAGCT...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp AGGGGCTGCTCACAGGTCCGCAGGGCAGAGGACCCTTCAGTCCCAGCTCCTTTCAGCTGCTCCAGCTGCTaGATGGTGTTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RGCSQVRRAEDPSVPAPFSCSSC*MVFSCW
Trigger: CCAGCAGGAAAACACCATCAAGCAGCTGGAGCAGCT...GAAAGGAGCTGGGACTGAAGGGTCCTCTGCCCTGCGGACCTGTGAGCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCTTTCCAGGGGTGACTTaGCCCCAACCCTCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: QHPRRICLCGLISPLEGGFPGVT*PQPSAR
Trigger: TCTCGCTGAGGGTTGGGGCAAAGTCACCCCTGGAAA...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCCGTCTTGCCCACCTTaGGCTGATCCAGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLPSCPP*ADPAKE
Trigger: CTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACGG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS GCA 90 bp GGTGGCCGTGTTCAGCTCCTCATACTCGCAGCCCAGGGCCTCAGCTaGGTAGTTTGCCCACTCAAACCTCATGAACTGCTTCCGACCCAC +
Preference number: 5 (lower is better)
Translates to: GGRVQLLILAAQGLS*VVCPLKPHELLPTH
Trigger: GTGGGTCGGAAGCAGTTCATGAGGTTTGAGTGGGCAAACTACGCAGCTGAGGCCCTGGGCTGCGAGTATGAGGAGCTGAACACGGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS-3UTR CAA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGAGCTCCCAGGAGAGCTaGACTGGTCGTCCTGAGAGA +
Preference number: 5 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMSSQES*TGRPER
Trigger: TCTCTCAGGACGACCAGTCAAGCTCTCCTGGGAGCT...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCGGACAGTCTTTTTGGTaGGTGTCGCACTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIGQSFW*VSHWSP
Trigger: TGGGCTCCAGTGCGACACCAACCAAAAAGACTGTCC...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGGAGTCCGGGTCCAGCTaGGCCACCATCAACAACACA +
Preference number: 5 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMESGSS*ATINNT
Trigger: TGTGTTGTTGATGGTGGCCAAGCTGGACCCGGACTC...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCGCCCTGCACTTGGCTaGTCTTCTCCATCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSRPALG*SSPSGS
Trigger: AGACCCAGATGGAGAAGACAAGCCAAGTGCAGGGCG...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGCAACTCGCCCTGCACTaGGCTTGTCTTCTCCATCTG +
Preference number: 5 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLQLALH*ACLLHL
Trigger: CAGATGGAGAAGACAAGCCAAGTGCAGGGCGAGTTG...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGTCTTCTCCAAAAGCATaGTCTGGAGCTGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPSSPKA*SGAEQL
Trigger: CAGCTGCTCAGCTCCAGACAATGCTTTTGGAGAAGA...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCTGGCCCAAACGTCATTaGCTGGATGATCTGTCGAAG +
Preference number: 5 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGWPKRH*LDDLSK
Trigger: CTTCGACAGATCATCCAGCAAATGACGTTTGGGCCA...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCAGCTCCTCTCTTTTaGACTGGTGCAGGACCTGGG +
Preference number: 5 (lower is better)
Translates to: HPRRICLCGLISPLEGGHAAPLF*TGAGPG
Trigger: CCCAGGTCCTGCACCAGTCAAAAAGAGAGGAGCTGC...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCGTCCAGCACCTGGAATaGCCGGCGGAAGCGAGTGAG +
Preference number: 5 (lower is better)
Translates to: DALQEVRLLKLQPVQLLIVQHLE*PAEASE
Trigger: CTCACTCGCTTCCGCCGGCAATTCCAGGTGCTGGAC...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCAGGCCACATCACCTTaGAAGCGCTCATCGGCAAGG +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLQATSP*KRSSAR
Trigger: CCTTGCCGATGAGCGCTTCAAAGGTGATGTGGCCTG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTGTTCATGCTTGCTCTaGAGCTCCTGGACCTCCCGG +
Preference number: 5 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMCSCLL*SSWTSR
Trigger: CCGGGAGGTCCAGGAGCTCAAGAGCAAGCATGAACA...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCGCTCTGGATTTTCTGTaGCTCAAGGGCGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLALDFL*LKGAGF
Trigger: GAATCCAGCGCCCTTGAGCAACAGAAAATCCAGAGC...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGCTGCAGCTGCAGTTCTaGGATCTGCCCAATGTCAGC +
Preference number: 5 (lower is better)
Translates to: GAQHPRRICLCGLISPLELQLQF*DLPNVS
Trigger: GCTGACATTGGGCAGATCCAAGAACTGCAGCTGCAG...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GTAAGCGGACCTGAGAGGGATTTTGATCCACAACAGCCACGGTGGTCCCTGGGGAGCTCCTCCCCCATCTaGATCAGGCTGTCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: VSGPERDFDPQQPRWSLGSSSPI*IRLSRS
Trigger: GCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGCT...CCCCAGGGACCACCGTGGCTGTTGTGGATCAAAATCCCTCTCAGGTCCGCTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGTGGGGAGAAACAGGCTaGTCTCCTGAGGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GAQHPRRICLCGLISPLEWGETG*SPEVLL
Trigger: CAGCAAGACCTCAGGAGACAAGCCTGTTTCTCCCCA...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CAA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCACAGCGGGGATGTATTaGTACTCCGAGAAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PTTLGAQHPRRICLCGLITAGMY*YSEKPG
Trigger: CCCTGGCTTCTCGGAGTACAAATACATCCCCGCTGT...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS TCA 90 bp ACCATTGTGCTCACCTCCTTTGGGGCTTCACAGCCCTTCTCTGTCTaGCTCCGAGCTTCACCTGCGTTCCCGGACTTACCCTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: TIVLTSFGASQPFSV*LRASPAFPDLPWGC
Trigger: GCAACCCCAGGGTAAGTCCGGGAACGCAGGTGAAGCTCGGAGTCAGACAGAGAAGGGCTGTGAAGCCCCAAAGGAGGTGAGCACAATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 90 bp GGCCAGGGACAGAGTACAGCTCAACCAGGACTGCAGGCTGCCCTCTaGCTGGGAGCTGAGGATGGAGACGTTATCCCTCTCAGTATCACT +
Preference number: 5 (lower is better)
Translates to: GQGQSTAQPGLQAAL*LGAEDGDVIPLSIT
Trigger: AGTGATACTGAGAGGGATAACGTCTCCATCCTCAGCTCCCAGCCAGAGGGCAGCCTGCAGTCCTGGTTGAGCTGTACTCTGTCCCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543971.1
CDS-3UTR CAA 90 bp TGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGGGACTTGCTGTTGGGTaGGCTGATGGAAATTTCTGG +
Preference number: 5 (lower is better)
Translates to: CLCGLISPLEGGHAGWLWGLAVG*ADGNFW
Trigger: CCAGAAATTTCCATCAGCCAACCCAACAGCAAGTCC...CCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACGGACTTGCTGTTGGGTaGGCTGATGGAAATTTCTGG +
Preference number: 5 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHGLAVG*ADGNFW
Trigger: CCAGAAATTTCCATCAGCCAACCCAACAGCAAGTCC...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCATGGGCCTTCTCACCATaGATGCTTGTCATCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPWAFSP*MLVICS
Trigger: TGAGCAGATGACAAGCATCAATGGTGAGAAGGCCCA...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGACAGTCTTTTTGGTaGGTGTCGCACTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSGQSFW*VSHWSP
Trigger: TGGGCTCCAGTGCGACACCAACCAAAAAGACTGTCC...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCAAGGGGACAGTCTTTTaGGTTGGTGTCGCACTGGAG +
Preference number: 5 (lower is better)
Translates to: QHPRRICLCGLISPLEGGKGTVF*VGVALE
Trigger: CTCCAGTGCGACACCAACCAAAAAGACTGTCCCCTT...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCAAGGGGACAGTCTTTTaGGTTGGTGTCGCACTGGAG +
Preference number: 5 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIKGTVF*VGVALE
Trigger: CTCCAGTGCGACACCAACCAAAAAGACTGTCCCCTT...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATACTTTCTCCCAGGGATTaGGGGCCTTACGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: CPPLADPAKEVGVWGFRILSPRD*GPYVLP
Trigger: GGGAAGCACGTAAGGCCCCAAATCCCTGGGAGAAAG...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGAAGAGCACCCCTTCTTaGTCCTTCTTATTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPKSTPS*SFLFWG
Trigger: TCCCCAGAATAAGAAGGACAAAGAAGGGGTGCTCTT...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GTAAGCGGACCTGAGAGGGATTTTGATCCACAACAGCCACGGTGGTCCCTGGGGCGCCCTGCACTTGGCTaGTCTTCTCCATCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: VSGPERDFDPQQPRWSLGRPALG*SSPSGS
Trigger: AGACCCAGATGGAGAAGACAAGCCAAGTGCAGGGCG...CCCCAGGGACCACCGTGGCTGTTGTGGATCAAAATCCCTCTCAGGTCCGCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCAACTCGCCCTGCACTaGGCTTGTCTTCTCCATCTG +
Preference number: 5 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMQLALH*ACLLHL
Trigger: CAGATGGAGAAGACAAGCCAAGTGCAGGGCGAGTTG...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTTGTGCTCACCTCCTTaGGGGCTTCACAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSLCSPP*GLHSPS
Trigger: AGAAGGGCTGTGAAGCCCCAAAGGAGGTGAGCACAA...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTGTGCTCACCTCCTTaGGGGCTTCACAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLLCSPP*GLHSPS
Trigger: AGAAGGGCTGTGAAGCCCCAAAGGAGGTGAGCACAA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCTGTTTATCTTCAGGCTaGGACCACACGCCCATGCCA +
Preference number: 5 (lower is better)
Translates to: QHPRRICLCGLISPLEGGCLSSG*DHTPMP
Trigger: TGGCATGGGCGTGTGGTCCAAGCCTGAAGATAAACA...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GAGGTCGACATGAGCTTCTTCAGGAGTGGAGCGTCCAGCACCTGGAATTGCCGGTGTCGAAGGTGGTGCTaGAAGGTGGCCGTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: EVDMSFFRSGASSTWNCRCRRWC*KVAVFS
Trigger: GCTGAACACGGCCACCTTCAAGCACCACCTTCGACA...CCGGCAATTCCAGGTGCTGGACGCTCCACTCCTGAAGAAGCTCATGTCGACCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTGGCCCAAACGTCATTaGCTGGATGATCTGTCGAAG +
Preference number: 5 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGWPKRH*LDDLSK
Trigger: CTTCGACAGATCATCCAGCAAATGACGTTTGGGCCA...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATCACACAGGAGGCAGCTaGGCCCGGGCCTGGAATAGA +
Preference number: 5 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDHTGGS*ARAWNR
Trigger: TCTATTCCAGGCCCGGGCCAAGCTGCCTCCTGTGTG...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp TGCCCACCTTTGGCTGATCCAGCCAAGGAGGTAGGTGTCTGGGGCTTCCGGATATGCAGCCGGGACCTTTaGATCATGCTGGTCAGCGCA +
Preference number: 5 (lower is better)
Translates to: CPPLADPAKEVGVWGFRICSRDL*IMLVSA
Trigger: TGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCA...TATCCGGAAGCCCCAGACACCTACCTCCTTGGCTGGATCAGCCAAAGGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCGAATCTTCAGCTTCTaGAATTCCTGGCGAGACAGA +
Preference number: 5 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGRIFSF*NSWRDR
Trigger: TCTGTCTCGCCAGGAATTCAAGAAGCTGAAGATTCG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGTGGACTTGTTCATGCTaGCTCTTGAGCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: FRPTTLGAQHPRRICLCGWTCSC*LLSSWT
Trigger: GGTCCAGGAGCTCAAGAGCAAGCATGAACAAGTCCA...CCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCCCGTCATAAGCACTTaGCAACTCCCCAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: QANHTGSPASPQDMPLWAPVIST*QLPKLL
Trigger: CAAAAGCTTGGGGAGTTGCAAAGTGCTTATGACGGG...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATAGCTGCTCCAGCTGCTaGATGGTGTTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: HPRRICLCGLISPLEGGHSCSSC*MVFSCW
Trigger: CCAGCAGGAAAACACCATCAAGCAGCTGGAGCAGCT...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTCATCCACCAGGCTCTaGTTCCGCGTCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSSSTRL*FRVMFS
Trigger: GGAGAACATGACGCGGAACAAGAGCCTGGTGGATGA...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCCTGCAGCTGCAGTTCTaGGATCTGCCCAATGTCAGC +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLLQLQF*DLPNVS
Trigger: GCTGACATTGGGCAGATCCAAGAACTGCAGCTGCAG...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTCTGCAGCTGCAGTTCTaGGATCTGCCCAATGTCAGC +
Preference number: 5 (lower is better)
Translates to: YASVGSSRLLRVAMLAGSLQLQF*DLPNVS
Trigger: GCTGACATTGGGCAGATCCAAGAACTGCAGCTGCAG...AGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTAAAATGACAGTACTTTaGCCGGCGGACAAAGTGGGG +
Preference number: 5 (lower is better)
Translates to: QANHTGSPASPQDMPLWAKMTVL*PADKVG
Trigger: CCCCACTTTGTCCGCCGGCAAAAGTACTGTCATTTT...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CAA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGACAGCGGGGATGTATTaGTACTCCGAGAAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMTAGMY*YSEKPG
Trigger: CCCTGGCTTCTCGGAGTACAAATACATCCCCGCTGT...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCACAGCGGGGATGTATTaGTACTCCGAGAAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLTAGMY*YSEKPG
Trigger: CCCTGGCTTCTCGGAGTACAAATACATCCCCGCTGT...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CAA 90 bp TCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCTCGCAGGAACTGAATaGGGTTTTCGACTTTTCGGG +
Preference number: 5 (lower is better)
Translates to: SVGSSRLLRVAMLAGSGHLAGTE*GFRLFG
Trigger: CCCGAAAAGTCGAAAACCCAATTCAGTTCCTGCGAG...GTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CAA 90 bp CTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACTCGCAGGAACTGAATaGGGTTTTCGACTTTTCGGG +
Preference number: 5 (lower is better)
Translates to: LCGLISPLEGGHAGWLWPLAGTE*GFRLFG
Trigger: CCCGAAAAGTCGAAAACCCAATTCAGTTCCTGCGAG...TGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CAA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCCGTCTTGCCCACCTTaGGCTGATCCAGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: DALQEVRLLKLQPVQLLIPSCPP*ADPAKE
Trigger: CTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACGG...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGTTCTTCAAAATGGTCTaGATCCCCGAGAGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: GLISPLEGGHAGWLWPPGFFKMV*IPERKE
Trigger: TTCCTTTCTCTCGGGGATCAAGACCATTTTGAAGAA...CCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATGGCTCATCTCGCCTCTaGAGGGTGGCCATGCTGGCT +
Preference number: 5 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDGSSRL*RVAMLA
Trigger: AGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCC...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS GCA 90 bp GTTCAGCTCCTCATACTCGCAGCCCAGGGCCTCAGCTGCGTAGTTTaGCCACTCAAACCTCATGAACTGCTTCCGACCCACTTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: VQLLILAAQGLSCVV*PLKPHELLPTHFAG
Trigger: GCCTGCAAAGTGGGTCGGAAGCAGTTCATGAGGTTTGAGTGGGCAAACTACGCAGCTGAGGCCCTGGGCTGCGAGTATGAGGAGCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
CDS GCA 90 bp TCCGACCCACTTGGACCACACGCCCATGCCAAAGGAGCTGCTATCTaGCATCTGGTGCAGGTTCAGCTCCGTCCTGAGATCCAAGTCCAA +
Preference number: 5 (lower is better)
Translates to: SDPLGPHAHAKGAAI*HLVQVQLRPEIQVQ
Trigger: TTGGACTTGGATCTCAGGACGGAGCTGAACCTGCACCAGATGGCAGATAGCAGCTCCTTTGGCATGGGCGTGTGGTCCAAGTGGGTCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS GCA 90 bp GTTCAGCTCCTCATACTCGCAGCCCAGGGCCTCAGCTGCGTAGTTTaGCCACTCAAACCTCATGAACTGCTTCCGACCCACTTGGACCAC +
Preference number: 5 (lower is better)
Translates to: VQLLILAAQGLSCVV*PLKPHELLPTHLDH
Trigger: GTGGTCCAAGTGGGTCGGAAGCAGTTCATGAGGTTTGAGTGGGCAAACTACGCAGCTGAGGCCCTGGGCTGCGAGTATGAGGAGCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATAAGGGGACAGTCTTTTaGGTTGGTGTCGCACTGGAG +
Preference number: 5 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHKGTVF*VGVALE
Trigger: CTCCAGTGCGACACCAACCAAAAAGACTGTCCCCTT...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GTGGACCGGGCTCTGCTCAGTGCCAATGCCGACTGGGTCCTCTCAGTGTCCCCAAAGAGCACCCCTTCTTaGTCCTTCTTATTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: VDRALLSANADWVLSVSPKSTPS*SFLFWG
Trigger: TCCCCAGAATAAGAAGGACAAAGAAGGGGTGCTCTT...TGGGGACACTGAGAGGACCCAGTCGGCATTGGCACTGAGCAGAGCCCGGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCAGGACACTGGATTCGTaGACACTGATGAGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLRTLDS*TLMREA
Trigger: GGCCTCTCTCATCAGTGTCAACGAATCCAGTGTCCT...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGATGCGGCCTGTAGCGTaGAAGTCCAGCGACATCACC +
Preference number: 5 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVMRPVA*KSSDIT
Trigger: GGTGATGTCGCTGGACTTCAACGCTACAGGCCGCAT...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGTCTTCTCCAAAAGCATaGTCTGGAGCTGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GAQHPRRICLCGLISPLESSPKA*SGAEQL
Trigger: CAGCTGCTCAGCTCCAGACAATGCTTTTGGAGAAGA...CTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCGAGGAAAAGGATCTGTaGATGAGTGAGACCACAGCC +
Preference number: 5 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIEEKDL*MSETTA
Trigger: GGCTGTGGTCTCACTCATCAACAGATCCTTTTCCTC...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCAGAGGAAAAGGATCTGTaGATGAGTGAGACCACAGCC +
Preference number: 5 (lower is better)
Translates to: EDAVWATTACPWVWSESSEEKDL*MSETTA
Trigger: GGCTGTGGTCTCACTCATCAACAGATCCTTTTCCTC...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCCACCAGGCTCTTGTTCCGCGCAGCTCCTCTCTTTTaGACTGGTGCAGGACCTGGG +
Preference number: 5 (lower is better)
Translates to: AFSNCSLYSCSSTRLLFRAAPLF*TGAGPG
Trigger: CCCAGGTCCTGCACCAGTCAAAAAGAGAGGAGCTGC...GCGGAACAAGAGCCTGGTGGATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGGCATCCATCTGCAGCTaGATCTGGGAGCACGGGGCT +
Preference number: 5 (lower is better)
Translates to: STQSTPVILSPELVSSSSASICS*IWEHGA
Trigger: AGCCCCGTGCTCCCAGATCAAGCTGCAGATGGATGC...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGCCTTGAGAAAAACTaGGCTGTGCCCCACAGCCAC +
Preference number: 5 (lower is better)
Translates to: FVQANHTGSPASPQDMPLCLEKN*AVPHSH
Trigger: GTGGCTGTGGGGCACAGCCAAGTTTTTCTCAAGGCA...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGACTTGTTCATGCTaGCTCTTGAGCTCCTGGACC +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLWTCSC*LLSSWT
Trigger: GGTCCAGGAGCTCAAGAGCAAGCATGAACAAGTCCA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGGCACTTCCTCTTCAGTaGGTGAGCCATCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMALPLQ*VSHLLG
Trigger: GCCAAGAAGATGGCTCACCAACTGAAGAGGAAGTGC...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGGGCTTCCTGCTCCTTTaGCTTCAGCTGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: FVQANHTGSPASPQDMPLGFLLL*LQLLLK
Trigger: CTTCAGCAGCAGCTGAAGCAAAAGGAGCAGGAAGCC...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCGCTCTGGATTTTCTGTaGCTCAAGGGCGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLALDFL*LKGAGF
Trigger: GAATCCAGCGCCCTTGAGCAACAGAAAATCCAGAGC...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCAAAATGACAGTACTTTaGCCGGCGGACAAAGTGGGG +
Preference number: 5 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIKMTVL*PADKVG
Trigger: CCCCACTTTGTCCGCCGGCAAAAGTACTGTCATTTT...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CAA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATTTTCGGGGAGTAGGGTaGTGCCCCCAACACCGTCTG +
Preference number: 5 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDFRGVG*CPQHRL
Trigger: CAGACGGTGTTGGGGGCACAACCCTACTCCCCGAAA...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCCTCGCAGGAACTGAATaGGGTTTTCGACTTTTCGGG +
Preference number: 5 (lower is better)
Translates to: PTTLGAQHPRRICLCGLILAGTE*GFRLFG
Trigger: CCCGAAAAGTCGAAAACCCAATTCAGTTCCTGCGAG...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTTCCAACTTGGCCCTTaGCATGTCTGTGATCCCACC +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLFQLGP*HVCDPT
Trigger: GGTGGGATCACAGACATGCAAAGGGCCAAGTTGGAA...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CAA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGCAGCTTCAAGGAGGCTaGACTCCAGATGAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: FVQANHTGSPASPQDMPLQLQGG*TPDEWQ
Trigger: CTGCCACTCATCTGGAGTCAAGCCTCCTTGAAGCTG...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS TCA 90 bp GAGATGGCCATGCTGAGGCAGTGCCAGGGCCGTGAGATGATGAGATaGGATGGAGCTTCCTGCCAGACAGCACGGAATGAGGCTTTACAG +
Preference number: 5 (lower is better)
Translates to: EMAMLRQCQGREMMR*DGASCQTARNEALQ
Trigger: CTGTAAAGCCTCATTCCGTGCTGTCTGGCAGGAAGCTCCATCTCATCTCATCATCTCACGGCCCTGGCACTGCCTCAGCATGGCCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
CDS TCA 90 bp TTGCCCAGAATGTCTGAGCTCCCAGGAGAGCTTGACTGGTCGTCCTaGGAGATCTGCTGGCTTCCAGATCTGGTGCCACTGCTGGACTTG +
Preference number: 5 (lower is better)
Translates to: LPRMSELPGELDWSS*EICWLPDLVPLLDL
Trigger: CAAGTCCAGCAGTGGCACCAGATCTGGAAGCCAGCAGATCTCTCAGGACGACCAGTCAAGCTCTCCTGGGAGCTCAGACATTCTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 90 bp AGGTTCAGCTCCGTCCTGAGATCCAAGTCCAATCCAGCCAGCATCTaGGAGAAAACCAGGAAGTTACTTTCCCCTTCCGGCTGCCGTGCC +
Preference number: 5 (lower is better)
Translates to: RFSSVLRSKSNPASI*EKTRKLLSPSGCRA
Trigger: GGCACGGCAGCCGGAAGGGGAAAGTAACTTCCTGGTTTTCTCCCAGATGCTGGCTGGATTGGACTTGGATCTCAGGACGGAGCTGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 90 bp GCCCTCCTGCCCTTCTGTGATGACCACTGGGTGAGAAGCCCCTCCTaGATGTTATGTCACTCTGTTCAGTTGTCTCAGCCTCCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: ALLPFCDDHWVRSPS*MLCHSVQLSQPPGS
Trigger: ACTGCCAGGAGGCTGAGACAACTGAACAGAGTGACATAACATCCAGGAGGGGCTTCTCACCCAGTGGTCATCACAGAAGGGCAGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534908.5
ENST00000536204.1
CDS-3UTR CAA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACTGCTCTGGCCTCCTTaGCCCTCCTCCTGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGLLWPP*PSSCGA
Trigger: AGCCCCGCAGGAGGAGGGCAAAGGAGGCCAGAGCAG...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCACCTCAGTGATGGTTTaGTCAGCATCAATCCAAAGT +
Preference number: 5 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGTSVMV*SASIQS
Trigger: ACTTTGGATTGATGCTGACAAAACCATCACTGAGGT...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGCGAATCTTCAGCTTCTaGAATTCCTGGCGAGACAGA +
Preference number: 5 (lower is better)
Translates to: PAGYASVGSSRLLRVAMLRIFSF*NSWRDR
Trigger: TCTGTCTCGCCAGGAATTCAAGAAGCTGAAGATTCG...CAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp GAGGACGCAGTGTGGGCGACAACAGCATGTCCCTGGGTGTGGTCGGAGAGCTCACGAATCTTCAGCTTCTaGAATTCCTGGCGAGACAGA +
Preference number: 5 (lower is better)
Translates to: EDAVWATTACPWVWSESSRIFSF*NSWRDR
Trigger: TCTGTCTCGCCAGGAATTCAAGAAGCTGAAGATTCG...TGAGCTCTCCGACCACACCCAGGGACATGCTGTTGTCGCCCACACTGCGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCAGGTAGCAAGGCCGGCTTCCTGCTCCTTTaGCTTCAGCTGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: VLPLSAPHQLSGIPGSKAGFLLL*LQLLLK
Trigger: CTTCAGCAGCAGCTGAAGCAAAAGGAGCAGGAAGCC...GGCCTTGCTACCTGGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp GATGCGCTTCAGGAGGTCCGCCTTCTCAAACTGCAGCCTGTACAGCTGCTCATCGTCTGTCTGGAGGGTTaGCCTCACTGCTGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: DALQEVRLLKLQPVQLLIVCLEG*PHCCKF
Trigger: GAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGAC...GATGAGCAGCTGTACAGGCTGCAGTTTGAGAAGGCGGACCTCCTGAAGCGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATAAAATGACAGTACTTTaGCCGGCGGACAAAGTGGGG +
Preference number: 5 (lower is better)
Translates to: HPRRICLCGLISPLEGGHKMTVL*PADKVG
Trigger: CCCCACTTTGTCCGCCGGCAAAAGTACTGTCATTTT...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000543971.1
CDS-3UTR CAA 90 bp CACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTTCAAAGTGGATGCTaGAACGCTGTGAACCGTCTT +
Preference number: 5 (lower is better)
Translates to: HWEPSIPAGYASVGSSRLFQSGC*NAVNRL
Trigger: AAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAA...GAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp TGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGTTCTTCAAAATGGTCTaGATCCCCGAGAGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: CGLISPLEGGHAGWLWPPFFKMV*IPERKE
Trigger: TTCCTTTCTCTCGGGGATCAAGACCATTTTGAAGAA...CGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCATTCCTGGTCGACTTTaGATGCTGTCAGCACTTTTG +
Preference number: 5 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGIPGRL*MLSALL
Trigger: CAAAAGTGCTGACAGCATCAAAAGTCGACCAGGAAT...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS GCA 90 bp CCATCTTTTCCTTCTTATCCCAGGACTCACCTGCCTTCCCAGTCGTaGTCCGAAGCTCACCTGCTTTCTCCCCCATTCTCAGATCGTCCC +
Preference number: 5 (lower is better)
Translates to: PSFPSYPRTHLPSQS*SEAHLLSPPFSDRP
Trigger: GGGACGATCTGAGAATGGGGGAGAAAGCAGGTGAGCTTCGGAGCACGACTGGGAAGGCAGGTGAGTCCTGGGATAAGAAGGAAAAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS GCA 90 bp ATCTTCAGGCTTGGACCACACGCCCATGCCAAAGGAGCTGCTATCTaGCATCTGGTGCAGGTTCAGCTCCGTCCTGAGATCCAAGTCCAA +
Preference number: 5 (lower is better)
Translates to: IFRLGPHAHAKGAAI*HLVQVQLRPEIQVQ
Trigger: TTGGACTTGGATCTCAGGACGGAGCTGAACCTGCACCAGATGGCAGATAGCAGCTCCTTTGGCATGGGCGTGTGGTCCAAGCCTGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
CDS GCA 90 bp GCTGAGGATGGAGACGTTATCCCTCTCAGTATCACTGTCACTGGATaGCACTTCTTCCAAGGCAGCCTGCAGGTCGGCAATCCGCCGAAT +
Preference number: 5 (lower is better)
Translates to: AEDGDVIPLSITVTG*HFFQGSLQVGNPPN
Trigger: ATTCGGCGGATTGCCGACCTGCAGGCTGCCTTGGAAGAAGTGGCATCCAGTGACAGTGATACTGAGAGGGATAACGTCTCCATCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543971.1
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCAAGAGCACCCCTTCTTaGTCCTTCTTATTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLKSTPS*SFLFWG
Trigger: TCCCCAGAATAAGAAGGACAAAGAAGGGGTGCTCTT...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGCAACTCGCCCTGCACTaGGCTTGTCTTCTCCATCTG +
Preference number: 5 (lower is better)
Translates to: STQSTPVILSPELVSSSSQLALH*ACLLHL
Trigger: CAGATGGAGAAGACAAGCCAAGTGCAGGGCGAGTTG...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp TTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCCGGGGCTGGCCCGTCTaGGTTCTCCTTCCGTATCCG +
Preference number: 5 (lower is better)
Translates to: FYSNSPTPICTPSTLWNPRGWPV*VLLPYP
Trigger: CGGATACGGAAGGAGAACCAAGACGGGCCAGCCCCG...GGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp AGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCACCTCAGTGATGGTTTaGTCAGCATCAATCCAAAGT +
Preference number: 5 (lower is better)
Translates to: RPTTLGAQHPRRICLCGLTSVMV*SASIQS
Trigger: ACTTTGGATTGATGCTGACAAAACCATCACTGAGGT...GAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp TGGTACCAGGCAGTGGATAAAGTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGAGACAGAAAGCCCTaGCAAGCCGCCTGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: WYQAVDKVQPGPFDHAGQRDRKP*QAAWKR
Trigger: TCTCTTCCAGGCGGCTTGCAAGGGCTTTCTGTCTCG...CTGACCAGCATGATCAAAAGGTCCCGGCTGCACTTTATCCACTGCCTGGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTTTCAAAGTGGATGCTaGAACGCTGTGAACCGTCTT +
Preference number: 5 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIFQSGC*NAVNRL
Trigger: AAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAA...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTTTTCAAAGTGGATGCTaGAACGCTGTGAACCGTCTT +
Preference number: 5 (lower is better)
Translates to: PRRICLCGLISPLEGGHAFQSGC*NAVNRL
Trigger: AAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAA...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp GGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATTCTTCAAAATGGTCTaGATCCCCGAGAGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: GQPHWEPSIPAGYASVGSFFKMV*IPERKE
Trigger: TTCCTTTCTCTCGGGGATCAAGACCATTTTGAAGAA...TGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTATTCCTGGTCGACTTTaGATGCTGTCAGCACTTTTG +
Preference number: 5 (lower is better)
Translates to: PRRICLCGLISPLEGGHAIPGRL*MLSALL
Trigger: CAAAAGTGCTGACAGCATCAAAAGTCGACCAGGAAT...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCATTCCTGGTCGACTTTaGATGCTGTCAGCACTTTTG +
Preference number: 5 (lower is better)
Translates to: QHPRRICLCGLISPLEGGIPGRL*MLSALL
Trigger: CAAAAGTGCTGACAGCATCAAAAGTCGACCAGGAAT...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp CAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTAGTCAACACTTTATTTaGTTCAGGCCAACCACACTG +
Preference number: 5 (lower is better)
Translates to: QANHTGSPASPQDMPLWASQHFI*FRPTTL
Trigger: CAGTGTGGTTGGCCTGAACAAAATAAAGTGTTGACT...AGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp TCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCAGTCAACACTTTATTTaGTTCAGGCCAACCACACTG +
Preference number: 5 (lower is better)
Translates to: SGQPHWEPSIPAGYASVGSQHFI*FRPTTL
Trigger: CAGTGTGGTTGGCCTGAACAAAATAAAGTGTTGACT...GCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp GCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCAAACTACACACAGTTaGGGTTGGTTCTATTCTAAC +
Preference number: 5 (lower is better)
Translates to: ASVGSSRLLRVAMLAGSGQTTHS*GWFYSN
Trigger: GTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTG...GCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp CTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCTGGCCACCGGGGAGGATGGAGGAGGAGCATTaGTTTCAGTTTGATATATCA +
Preference number: 5 (lower is better)
Translates to: LISPLEGGHAGWLWPPGRMEEEH*FQFDIS
Trigger: TGATATATCAAACTGAAACAAATGCTCCTCCTCCAT...CCTCCCCGGTGGCCAGAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS TCA 90 bp GCTCAGGAGGGTTGGCCCGATGGACATGCTCCTCATCCACCTCAGTaGTGGTTTTGTCAGCATCAATCCAAAGTCTCACCCTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: AQEGWPDGHAPHPPQ*WFCQHQSKVSPFLL
Trigger: CAGCAGGAAGGGTGAGACTTTGGATTGATGCTGACAAAACCATCACTGAGGTGGATGAGGAGCATGTCCATCGGGCCAACCCTCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 90 bp GGTCAAACCTTGTTAGGGGCCCTCCTGCCCTTCTGTGATGACCACTaGGTGAGAAGCCCCTCCTGGATGTTATGTCACTCTGTTCAGTTG +
Preference number: 5 (lower is better)
Translates to: GQTLLGALLPFCDDH*VRSPSWMLCHSVQL
Trigger: CAACTGAACAGAGTGACATAACATCCAGGAGGGGCTTCTCACCCAGTGGTCATCACAGAAGGGCAGGAGGGCCCCTAACAAGGTTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536204.1
CDS-3UTR CAA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGGGACTTGCTGTTGGGTaGGCTGATGGAAATTTCTGG +
Preference number: 5 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVGLAVG*ADGNFW
Trigger: CCAGAAATTTCCATCAGCCAACCCAACAGCAAGTCC...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATAGCTCCCAGGAGAGCTaGACTGGTCGTCCTGAGAGA +
Preference number: 5 (lower is better)
Translates to: SGDVFVLREARGEEAGSNSSQES*TGRPER
Trigger: TCTCTCAGGACGACCAGTCAAGCTCTCCTGGGAGCT...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GGGAGTAGGGTTGTGCCCCCAACACCGTCTGAAGAGATGCATTTGAGGCTGGTGTGGGCCTTCTCACCATaGATGCTTGTCATCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GSRVVPPTPSEEMHLRLVWAFSP*MLVICS
Trigger: TGAGCAGATGACAAGCATCAATGGTGAGAAGGCCCA...CACCAGCCTCAAATGCATCTCTTCAGACGGTGTTGGGGGCACAACCCTACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GTCCTCCTGAGGTCTCTCCGAAGTCGCTTCTCCACATCAAAGTCCCGATGGCCATGGCCCAAACGTCATTaGCTGGATGATCTGTCGAAG +
Preference number: 5 (lower is better)
Translates to: VLLRSLRSRFSTSKSRWPWPKRH*LDDLSK
Trigger: CTTCGACAGATCATCCAGCAAATGACGTTTGGGCCA...TGGCCATCGGGACTTTGATGTGGAGAAGCGACTTCGGAGAGACCTCAGGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAATCCAGGGCCGAGAGGTaGGGCTTGGCTCTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQSRAER*GLALWS
Trigger: GCTCCACAGAGCCAAGCCCAACCTCTCGGCCCTGGA...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGTCAAGTCAGCAATCTaGCTTTCTAGCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: HPRRICLCGLISPLEGGHVKSAI*LSSRSV
Trigger: CACAGATCTGCTAGAAAGCAAGATTGCTGACTTGAC...ATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp ATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTGGCTGGCTCGTCAAGTCAGCAATCTaGCTTTCTAGCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: ICLCGLISPLEGGHAGWLVKSAI*LSSRSV
Trigger: CACAGATCTGCTAGAAAGCAAGATTGCTGACTTGAC...GAGCCAGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CTTGGCCCAAACGTCATTTGCTGGATGATCTGTCGAAGGTGGTGCTTGAAGGTGCAGCCTCTCCTCGCATaGCTGCAGACGCTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: LGPNVICWMICRRWCLKVQPLLA*LQTLSE
Trigger: CTCAGAAAGCGTCTGCAGCAATGCGAGGAGAGGCTG...CACCTTCAAGCACCACCTTCGACAGATCATCCAGCAAATGACGTTTGGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATAAGGCCTCCTCACACTaGGCTTCACTCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SGDVFVLREARGEEAGSNKASSH*ASLCSS
Trigger: GCTGGAGCAGAGTGAAGCCAAGTGTGAGGAGGCCTT...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp ATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGAGTTGTTCTTGTAGCTaGTGCTTCTCCTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: IPAGYASVGSSRLLRVAMSCSCS*CFSFLA
Trigger: AGCCAAGAAGGAGAAGCACAAGCTACAAGAACAACT...CATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CTCGCTGTGCATGCTCTCCAGGTCCGCTGTGAGCACCTTCTGCGTCTTCAAGGCAGTTGTTCTTGTAGCTaGTGCTTCTCCTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LAVHALQVRCEHLLRLQGSCSCS*CFSFLA
Trigger: AGCCAAGAAGGAGAAGCACAAGCTACAAGAACAACT...GCCTTGAAGACGCAGAAGGTGCTCACAGCGGACCTGGAGAGCATGCACAGCGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp AGCGGGGATGTATTTGTACTCCGAGAAGCCAGGGGAGAGGAAGCAGGTTCTAATTTTCCAGGGGTGACTTaGCCCCAACCCTCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: SGDVFVLREARGEEAGSNFPGVT*PQPSAR
Trigger: TCTCGCTGAGGGTTGGGGCAAAGTCACCCCTGGAAA...ATTAGAACCTGCTTCCTCTCCCCTGGCTTCTCGGAGTACAAATACATCCCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp CCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTTCTTCAAAATGGTCTaGATCCCCGAGAGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: PTTLGAQHPRRICLCGLIFFKMV*IPERKE
Trigger: TTCCTTTCTCTCGGGGATCAAGACCATTTTGAAGAA...GATGAGCCCACAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAGGCTCATCTCGCCTCTaGAGGGTGGCCATGCTGGCT +
Preference number: 5 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASGSSRL*RVAMLA
Trigger: AGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCC...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp CCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCCATGCTAGTCAACACTTTATTTaGTTCAGGCCAACCACACTG +
Preference number: 5 (lower is better)
Translates to: PRRICLCGLISPLEGGHASQHFI*FRPTTL
Trigger: CAGTGTGGTTGGCCTGAACAAAATAAAGTGTTGACT...AGCATGGCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCAGTCAACACTTTATTTaGTTCAGGCCAACCACACTG +
Preference number: 5 (lower is better)
Translates to: QHPRRICLCGLISPLEGGSQHFI*FRPTTL
Trigger: CAGTGTGGTTGGCCTGAACAAAATAAAGTGTTGACT...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000540454.1
ENST00000543971.1
CDS GCA 90 bp ATGGAAATTTCTGGGATCTCTCGTTCTGGAGAGGCGACAGCTAACTaGTTCCTCTGTCTCGCTTCCTTGGCCTCTTTTTCAGTCCCCCGG +
Preference number: 5 (lower is better)
Translates to: MEISGISRSGEATAN*FLCLASLASFSVPR
Trigger: CCGGGGGACTGAAAAAGAGGCCAAGGAAGCGAGACAGAGGAAGCAGTTAGCTGTCGCCTCTCCAGAACGAGAGATCCCAGAAATTTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS-3UTR CAA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGCATCCATCTGCAGCTaGATCTGGGAGCACGGGGCT +
Preference number: 5 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRASICS*IWEHGA
Trigger: AGCCCCGTGCTCCCAGATCAAGCTGCAGATGGATGC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TTTGTTCAGGCCAACCACACTGGGAGCCCAGCATCCCCGCAGGATATGCCTCTGAGTTGTTCTTGTAGCTaGTGCTTCTCCTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: FVQANHTGSPASPQDMPLSCSCS*CFSFLA
Trigger: AGCCAAGAAGGAGAAGCACAAGCTACAAGAACAACT...CAGAGGCATATCCTGCGGGGATGCTGGGCTCCCAGTGTGGTTGGCCTGAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000407587.6
CDS-3UTR CAA 90 bp CTCCTTTCTTCTCGAAAGCAGCACACAGACGCTCGAGCACCACACTGTCACTGGAAAATGACAGTACTTTaGCCGGCGGACAAAGTGGGG +
Preference number: 5 (lower is better)
Translates to: LLSSRKQHTDARAPHCHWKMTVL*PADKVG
Trigger: CCCCACTTTGTCCGCCGGCAAAAGTACTGTCATTTT...CCAGTGACAGTGTGGTGCTCGAGCGTCTGTGTGCTGCTTTCGAGAAGAAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GAGTTCCTGGTACAGGCCCGAGGCCATCCCCTCCACACAGTCCACTCCTGTCATTTCTTCAAAATGGTCTaGATCCCCGAGAGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: EFLVQARGHPLHTVHSCHFFKMV*IPERKE
Trigger: TTCCTTTCTCTCGGGGATCAAGACCATTTTGAAGAA...ATGACAGGAGTGGACTGTGTGGAGGGGATGGCCTCGGGCCTGTACCAGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS GCA 90 bp ACAGCTCCTGAACTGGTTCCTACTTCTGGAGGTATTTCTTCATTATaGTCGCAACATCGTCGTCTTTCCTCCCCGTCCCTGGCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: TAPELVPTSGGISSL*SQHRRLSSPSLALS
Trigger: GGAGAGAGCCAGGGACGGGGAGGAAAGACGACGATGTTGCGAGCATAATGAAGAAATACCTCCAGAAGTAGGAACCAGTTCAGGAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS CCA 90 bp ATTAATGCCTTGTTAGGGGCCCTCCTGCCCTTCTGTGATGACCACTaGGTGAGAAGCCCCTCCTGGATGTTATGTCACTCTGTTCAGTTG +
Preference number: 5 (lower is better)
Translates to: INALLGALLPFCDDH*VRSPSWMLCHSVQL
Trigger: CAACTGAACAGAGTGACATAACATCCAGGAGGGGCTTCTCACCCAGTGGTCATCACAGAAGGGCAGGAGGGCCCCTAACAAGGCATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534908.5
CDS-3UTR CAA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTCTTTCTCCCAGGGATTaGGGGCCTTACGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSLSPRD*GPYVLP
Trigger: GGGAAGCACGTAAGGCCCCAAATCCCTGGGAGAAAG...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp CCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCCTGGCGACTCCACCATaGTGCTCACCTCCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: PQTTHSLGWFYSNSPTPILATPP*CSPPLG
Trigger: CCCCAAAGGAGGTGAGCACAATGGTGGAGTCGCCAG...GATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAACGAGGCCCCATCGGCTaGGCCCAAACGTCATTTGCT +
Preference number: 5 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQRGPIG*AQTSFA
Trigger: AGCAAATGACGTTTGGGCCAAGCCGATGGGGCCTCG...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GCCTCTTCCGTTTCAAAGTGGATGCTTGAACGCTGTGAACCGTCTTGCCCACCTGAGATCACACCTGCCTaGAGAAAAACTTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: ASSVSKWMLERCEPSCPPEITPA*RKTWLC
Trigger: GCACAGCCAAGTTTTTCTCAAGGCAGGTGTGATCTC...AGGTGGGCAAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAACGGAAGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAAGGCCTCCTCACACTaGGCTTCACTCTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRKASSH*ASLCSS
Trigger: GCTGGAGCAGAGTGAAGCCAAGTGTGAGGAGGCCTT...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CAGTTTCTCTCCATATGCAATGCAAGTGGACTCCACTATTCTGAAGGTCTCTTCGGCTCATCTCGCCTCTaGAGGGTGGCCATGCTGGCT +
Preference number: 5 (lower is better)
Translates to: QFLSICNASGLHYSEGLFGSSRL*RVAMLA
Trigger: AGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCC...GAAGAGACCTTCAGAATAGTGGAGTCCACTTGCATTGCATATGGAGAGAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CAA 90 bp CAGCATCCCCGCAGGATATGCCTCTGTGGGCTCATCTCGCCTCTTGAGGGTGGCGTTACTTATCCTGCATaGTTGCTCTGTGATTTTTGT +
Preference number: 5 (lower is better)
Translates to: QHPRRICLCGLISPLEGGVTYPA*LLCDFC
Trigger: ACAAAAATCACAGAGCAACAATGCAGGATAAGTAAC...GCCACCCTCAAGAGGCGAGATGAGCCCACAGAGGCATATCCTGCGGGGATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS TCA 90 bp GCCAGCCAGACTTTCTCTGCCTCATACCATCTGTCCTCAGGAGCCTaGGAACCAACATCACGTAAATTAAACCAGCAAATGGCACCGCTG +
Preference number: 5 (lower is better)
Translates to: ASQTFSASYHLSSGA*EPTSRKLNQQMAPL
Trigger: CAGCGGTGCCATTTGCTGGTTTAATTTACGTGATGTTGGTTCTCAGGCTCCTGAGGACAGATGGTATGAGGCAGAGAAAGTCTGGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418374.6
CDS TCA 90 bp GTGAGGAAACCGATAGAGAAGGCTTTGCCAAGCCTCAGTAAGGTGTaGCTTTCAGTCACTTCCCCTTGGCCCAAACAGGAAGTCCCATTG +
Preference number: 5 (lower is better)
Translates to: VRKPIEKALPSLSKV*LSVTSPWPKQEVPL
Trigger: CAATGGGACTTCCTGTTTGGGCCAAGGGGAAGTGACTGAAAGTCACACCTTACTGAGGCTTGGCAAAGCCTTCTCTATCGGTTTCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534908.5
ENST00000536204.1
CDS GCA 90 bp CGTAGCAAGAGTAAATCCATCCTTCTGAGCCAGCCAGACTTTCTCTaGCTCATACCATCTGTCCTCAGGAGCCTGAGAACCAACATCACG +
Preference number: 5 (lower is better)
Translates to: RSKSKSILLSQPDFL*LIPSVLRSLRTNIT
Trigger: CGTGATGTTGGTTCTCAGGCTCCTGAGGACAGATGGTATGAGGCAGAGAAAGTCTGGCTGGCTCAGAAGGATGGATTTACTCTTGCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418374.6
CDS-3UTR CAA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAGATGGTGGAGGGCTCTaGTCCTCTTCCCGAATCTTC +
Preference number: 5 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASDGGGL*SSSRIF
Trigger: GAAGATTCGGGAAGAGGACAAGAGCCCTCCACCATC...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAGGACAGTCTTTTTGGTaGGTGTCGCACTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASGQSFW*VSHWSP
Trigger: TGGGCTCCAGTGCGACACCAACCAAAAAGACTGTCC...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGAGTCCGGGTCCAGCTaGGCCACCATCAACAACACA +
Preference number: 5 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQESGSS*ATINNT
Trigger: TGTGTTGTTGATGGTGGCCAAGCTGGACCCGGACTC...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTGGAATCCCTCCACTCCTGTCATCTaGAGCCCTGAGCTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: FYSNSPTPICTPSTLWNPSTPVI*SPELVS
Trigger: GGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGA...GGGATTCCAGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp TCCACACAGTCCACTCCTGTCATCTTGAGCCCTGAGCTGGTTTCCTCATCCTCGGTCAAGTCAGCAATCTaGCTTTCTAGCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: STQSTPVILSPELVSSSSVKSAI*LSSRSV
Trigger: CACAGATCTGCTAGAAAGCAAGATTGCTGACTTGAC...CGAGGATGAGGAAACCAGCTCAGGGCTCAAGATGACAGGAGTGGACTGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAGGCTTCCTGCTCCTTTaGCTTCAGCTGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASGFLLL*LQLLLK
Trigger: CTTCAGCAGCAGCTGAAGCAAAAGGAGCAGGAAGCC...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATCATCCACCAGGCTCTaGTTCCGCGTCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGSSTRL*FRVMFS
Trigger: GGAGAACATGACGCGGAACAAGAGCCTGGTGGATGA...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGTCTGTCTGGAGGGTTaGCCTCACTGCTGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRVCLEG*PHCCKF
Trigger: GAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGAC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CAA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGTCTGTCTGGAGGGTTaGCCTCACTGCTGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGVCLEG*PHCCKF
Trigger: GAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGAC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CAA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAATTTCCAGGGGTGACTTaGCCCCAACCCTCAGCGAGA +
Preference number: 5 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQFPGVT*PQPSAR
Trigger: TCTCGCTGAGGGTTGGGGCAAAGTCACCCCTGGAAA...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CAA 90 bp GTGCAGCCGGGACCTTTTGATCATGCTGGTCAGCGCATCCATCTGCAGCTTGATATTCCTGGTCGACTTTaGATGCTGTCAGCACTTTTG +
Preference number: 5 (lower is better)
Translates to: VQPGPFDHAGQRIHLQLDIPGRL*MLSALL
Trigger: CAAAAGTGCTGACAGCATCAAAAGTCGACCAGGAAT...ATCAAGCTGCAGATGGATGCGCTGACCAGCATGATCAAAAGGTCCCGGCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS GCA 90 bp CTTTTACCTGAACTGGTTCCTACTTCTGGAGGTATTTCTTCATTATaGTCGCAACATCGTCGTCTTTCCTCCCCGTCCCTGGCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: LLPELVPTSGGISSL*SQHRRLSSPSLALS
Trigger: GGAGAGAGCCAGGGACGGGGAGGAAAGACGACGATGTTGCGAGCATAATGAAGAAATACCTCCAGAAGTAGGAACCAGTTCAGGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418374.6
ENST00000536101.5
CDS CCA 90 bp CGAAGCCGGATCACCAGGACCTTGAGGGATCCCTTGAGCAATTTCTaGGAACCACTGAGGGTCAAAGCAAAGAAGAATTTCTCTCTGTTC +
Preference number: 5 (lower is better)
Translates to: RSRITRTLRDPLSNF*EPLRVKAKKNFSLF
Trigger: GAACAGAGAGAAATTCTTCTTTGCTTTGACCCTCAGTGGTTCCCAGAAATTGCTCAAGGGATCCCTCAAGGTCCTGGTGATCCGGCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539544.1
CDS-3UTR CAA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTTGCCTTGAGAAAAACTaGGCTGTGCCCCACAGCCAC +
Preference number: 5 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPCLEKN*AVPHSH
Trigger: GTGGCTGTGGGGCACAGCCAAGTTTTTCTCAAGGCA...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGGCACTTCCTCTTCAGTaGGTGAGCCATCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRALPLQ*VSHLLG
Trigger: GCCAAGAAGATGGCTCACCAACTGAAGAGGAAGTGC...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCGTCTGTCTGGAGGGTTaGCCTCACTGCTGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: PQTTHSLGWFYSNSPTPIVCLEG*PHCCKF
Trigger: GAACTTGCAGCAGTGAGGCAAACCCTCCAGACAGAC...GATAGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTTGGGGAGAAACAGGCTaGTCTCCTGAGGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPWGETG*SPEVLL
Trigger: CAGCAAGACCTCAGGAGACAAGCCTGTTTCTCCCCA...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAACAGCGGGGATGTATTaGTACTCCGAGAAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQTAGMY*YSEKPG
Trigger: CCCTGGCTTCTCGGAGTACAAATACATCCCCGCTGT...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS-3UTR CAA 90 bp ACAGCCACATTCTTCTGGATGCACTGTGCAGCCAGTCGGCGAATCTTCAGCTTCTTTCAAAGTGGATGCTaGAACGCTGTGAACCGTCTT +
Preference number: 5 (lower is better)
Translates to: TATFFWMHCAASRRIFSFFQSGC*NAVNRL
Trigger: AAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAA...GAAGCTGAAGATTCGCCGACTGGCTGCACAGTGCATCCAGAAGAATGTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS-3UTR CAA 90 bp GTAGGAAGAGAAATAGAAGTATACACCCCAAACTACACACAGTTTGGGTTGGTTGGCTCATCTCGCCTCTaGAGGGTGGCCATGCTGGCT +
Preference number: 5 (lower is better)
Translates to: VGREIEVYTPNYTQFGLVGSSRL*RVAMLA
Trigger: AGCCAGCATGGCCACCCTCAAGAGGCGAGATGAGCC...AACCAACCCAAACTGTGTGTAGTTTGGGGTGTATACTTCTATTTCTCTTCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp TGCATGTCTGTGATCCCACCACGGATCTTCTGTCATTATGTGGACAGAACGCCAAAGGTCTCTTCCAACTaGGCCCTTTGCATGTCTGTG +
Preference number: 5 (lower is better)
Translates to: CMSVIPPRIFCHYVDRTPKVSSN*ALCMSV
Trigger: CACAGACATGCAAAGGGCCAAGTTGGAAGAGACCTT...TGGCGTTCTGTCCACATAATGACAGAAGATCCGTGGTGGGATCACAGACATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CAA 90 bp TTGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTGGGCCTTCTCACCATaGATGCTTGTCATCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LGWFYSNSPTPICTPSTLWAFSP*MLVICS
Trigger: TGAGCAGATGACAAGCATCAATGGTGAGAAGGCCCA...GAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp ACACCCCAAACTACACACAGTTTGGGTTGGTTCTATTCTAACAGTCCTACCCCTAGGACACTGGATTCGTaGACACTGATGAGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: TPQTTHSLGWFYSNSPTPRTLDS*TLMREA
Trigger: GGCCTCTCTCATCAGTGTCAACGAATCCAGTGTCCT...AGGGGTAGGACTGTTAGAATAGAACCAACCCAAACTGTGTGTAGTTTGGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGAGGAAAAGGATCTGTaGATGAGTGAGACCACAGCC +
Preference number: 5 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGEEKDL*MSETTA
Trigger: GGCTGTGGTCTCACTCATCAACAGATCCTTTTCCTC...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TGGGTTGGTTCTATTCTAACAGTCCTACCCCTATCTGCACCCCATCAACTCTCTGAGATCACACCTGCCTaGAGAAAAACTTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: WVGSILTVLPLSAPHQLSEITPA*RKTWLC
Trigger: GCACAGCCAAGTTTTTCTCAAGGCAGGTGTGATCTC...AGAGAGTTGATGGGGTGCAGATAGGGGTAGGACTGTTAGAATAGAACCAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGCCCGTCATAAGCACTTaGCAACTCCCCAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRPVIST*QLPKLL
Trigger: CAAAAGCTTGGGGAGTTGCAAAGTGCTTATGACGGG...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp CTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGACTCGCAGGAACTGAATaGGGTTTTCGACTTTTCGGG +
Preference number: 5 (lower is better)
Translates to: LCLQVIVESGSLQGQLQGLAGTE*GFRLFG
Trigger: CCCGAAAAGTCGAAAACCCAATTCAGTTCCTGCGAG...TCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000543971.1
CDS CCA 90 bp CAAACAGGAAGTCCCATTGTTCCAGAGATCTTGATATGGCAGAAGTaGGCATGGGGTTTGGCCTTTGGTGGCAAGAAAGTCTCGCTTATT +
Preference number: 5 (lower is better)
Translates to: QTGSPIVPEILIWQK*AWGLAFGGKKVSLI
Trigger: AATAAGCGAGACTTTCTTGCCACCAAAGGCCAAACCCCATGCCCACTTCTGCCATATCAAGATCTCTGGAACAATGGGACTTCCTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534908.5
ENST00000536204.1
CDS-3UTR CAA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAATCTTCTCCAAAAGCATaGTCTGGAGCTGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQSSPKA*SGAEQL
Trigger: CAGCTGCTCAGCTCCAGACAATGCTTTTGGAGAAGA...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGAGATCACACCTGCCTaGAGAAAAACTTGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: SLCLQVIVESGSLQGQLQEITPA*RKTWLC
Trigger: GCACAGCCAAGTTTTTCTCAAGGCAGGTGTGATCTC...TTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TGCATGTCTGTGATCCCACCACGGATCTTCTGTCATTATGTGGACAGAACGCCATTTCAAAGTGGATGCTaGAACGCTGTGAACCGTCTT +
Preference number: 5 (lower is better)
Translates to: CMSVIPPRIFCHYVDRTPFQSGC*NAVNRL
Trigger: AAGACGGTTCACAGCGTTCAAGCATCCACTTTGAAA...TGGCGTTCTGTCCACATAATGACAGAAGATCCGTGGTGGGATCACAGACATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS CCA 90 bp TCCAGAGATCTTGATATGGCAGAAGTGGGCATGGGGTTTGGCCTTTaGTGGCAAGAAAGTCTCGCTTATTATAAGACTATCCAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: SRDLDMAEVGMGFGL*WQESLAYYKTIQCS
Trigger: GGAACACTGGATAGTCTTATAATAAGCGAGACTTTCTTGCCACCAAAGGCCAAACCCCATGCCCACTTCTGCCATATCAAGATCTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534908.5
ENST00000536204.1
CDS-3UTR CAA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGATTCCTGGTCGACTTTaGATGCTGTCAGCACTTTTG +
Preference number: 5 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRIPGRL*MLSALL
Trigger: CAAAAGTGCTGACAGCATCAAAAGTCGACCAGGAAT...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
ENST00000540454.1
ENST00000543971.1
CDS-3UTR CAA 90 bp GTCTCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAACCTCAGTGATGGTTTaGTCAGCATCAATCCAAAGT +
Preference number: 5 (lower is better)
Translates to: VSLSPSYCRVGKSSRAASTSVMV*SASIQS
Trigger: ACTTTGGATTGATGCTGACAAAACCATCACTGAGGT...TGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000539302.5
CDS-3UTR CAA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGCCGTCTTGCCCACCTTaGGCTGATCCAGCCAAGGAG +
Preference number: 5 (lower is better)
Translates to: SFISFLNACTHLYIHRIEPSCPP*ADPAKE
Trigger: CTCCTTGGCTGGATCAGCCAAAGGTGGGCAAGACGG...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp GTAGGAAGAGAAATAGAAGTATACACCCCAAACTACACACAGTTTGGGTTGGTTCCCGTCATAAGCACTTaGCAACTCCCCAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: VGREIEVYTPNYTQFGLVPVIST*QLPKLL
Trigger: CAAAAGCTTGGGGAGTTGCAAAGTGCTTATGACGGG...AACCAACCCAAACTGTGTGTAGTTTGGGGTGTATACTTCTATTTCTCTTCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp CTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGAGGCTTGACTTATCCTGCATTGTaGCTCTGTGATTTTTGTACT +
Preference number: 5 (lower is better)
Translates to: LQVIVESGSLQGQLQGGLTYPAL*LCDFCT
Trigger: AGTACAAAAATCACAGAGCAACAATGCAGGATAAGT...CAAGCCTCCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540454.1
CDS-3UTR CAA 90 bp TCATTCATCAGTTTCTTGAATGCTTGTACACACTTATACATACACAGGATAGAGTCATCCACCAGGCTCTaGTTCCGCGTCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SFISFLNACTHLYIHRIESSTRL*FRVMFS
Trigger: GGAGAACATGACGCGGAACAAGAGCCTGGTGGATGA...CTCTATCCTGTGTATGTATAAGTGTGTACAAGCATTCAAGAAACTGATGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS-3UTR CAA 90 bp TCTCTGTCTCCAAGTTATTGTAGAGTCGGGAAGTCTTCAAGGGCAGCTTCAAGGTGTGGGCTCATTTATTaGTTCTTTGGCTCATTCATT +
Preference number: 5 (lower is better)
Translates to: SLSPSYCRVGKSSRAASRCGLIY*FFGSFI
Trigger: AATGAATGAGCCAAAGAACAAATAAATGAGCCCACA...CCTTGAAGCTGCCCTTGAAGACTTCCCGACTCTACAATAACTTGGAGACAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335473.12
CDS CCA 72 bp AGCGCCCAGTATGCCCGCTGTGCCATGGAGCCAATGTaGGCAGGCAGGCCATCCCGGCGGCCCTTGGGCACC +
Preference number: 6 (lower is better)
Translates to: SAQYARCAMEPM*AGRPSRRPLGT
Trigger: GGTGCCCAAGGGCCGCCGGGATGGCCTGCCTGCCCACATTGGCTCCATGGCACAGCGGGCATACTGGGCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 72 bp GCTGGTTCAGCAGCGCCCAGTATGCCCGCTGTGCCATaGAGCCAATGTGGGCAGGCAGGCCATCCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: AGSAAPSMPAVP*SQCGQAGHPGG
Trigger: GCCGCCGGGATGGCCTGCCTGCCCACATTGGCTCCATGGCACAGCGGGCATACTGGGCGCTGCTGAACCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS GCA 72 bp TCTCCGCTGGTTCAGCAGCGCCCAGTATGCCCGCTGTaGCATGGAGCCAATGTGGGCAGGCAGGCCATCCCG +
Preference number: 6 (lower is better)
Translates to: SPLVQQRPVCPL*HGANVGRQAIP
Trigger: CGGGATGGCCTGCCTGCCCACATTGGCTCCATGGCACAGCGGGCATACTGGGCGCTGCTGAACCAGCGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 72 bp CACAGGAACCACGACTGTCTAAGACGTCTCCCCGGGTaGCCGCGAAGGGACCCCACCGAGCCGGGAAAGCAG +
Preference number: 6 (lower is better)
Translates to: HRNHDCLRRLPG*PRRDPTEPGKQ
Trigger: CTGCTTTCCCGGCTCGGTGGGGTCCCTTCGCGGCCACCCGGGGAGACGTCTTAGACAGTCGTGGTTCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335473.12
ENST00000536101.5
CDS TCA 72 bp TGCCAGGACCCGCCAAACAGCCCGCTGCTCGCTCTCTaGGATGCCGAGCATCTCCATGGCACCCTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: CQDPPNSPLLAL*DAEHLHGTLEL
Trigger: CAGCTCCAGGGTGCCATGGAGATGCTCGGCATCTCAGAGAGCGAGCAGCGGGCTGTTTGGCGGGTCCTGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
CDS GCA 72 bp GCTCTGGTCTCTCCGCTGGTTCAGCAGCGCCCAGTATaGCCGCTGTGCCATGGAGCCAATGTGGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: ALVSPLVQQRPV*PLCHGANVGRQ
Trigger: CTGCCTGCCCACATTGGCTCCATGGCACAGCGGGCATACTGGGCGCTGCTGAACCAGCGGAGAGACCAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS GCA 72 bp TGGTCTTCCCAGCGCCACTCCAGCCCAGGGCCACAATaGTCTGGTCTCTCCGCTGGTTCAGCAGCGCCCAGT +
Preference number: 6 (lower is better)
Translates to: WSSQRHSSPGPQ*SGLSAGSAAPS
Trigger: ACTGGGCGCTGCTGAACCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCTGGAGTGGCGCTGGGAAGACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 72 bp TCTGCTCTGGCCTCCTTTGCCCTCCTCCTGCGGGGCTaGCCCGTCTTGGTTCTCCTTCCGTATCCGAGGCCT +
Preference number: 6 (lower is better)
Translates to: SALASFALLLRG*PVLVLLPYPRP
Trigger: AGGCCTCGGATACGGAAGGAGAACCAAGACGGGCCAGCCCCGCAGGAGGAGGGCAAAGGAGGCCAGAGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 72 bp CTCCAGCCCAGGGCCACAATGCTCTGGTCTCTCCGCTaGTTCAGCAGCGCCCAGTATGCCCGCTGTGCCATG +
Preference number: 6 (lower is better)
Translates to: LQPRATMLWSLR*FSSAQYARCAM
Trigger: CATGGCACAGCGGGCATACTGGGCGCTGCTGAACCAGCGGAGAGACCAGAGCATTGTGGCCCTGGGCTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 72 bp GACATCACCATGGAGAACCGGGTGGCACTGCGGCTGTaGGCCATGGACACAGAGCCGAAGGCCCGGAGGACA +
Preference number: 6 (lower is better)
Translates to: DITMENRVALRL*AMDTEPKARRT
Trigger: TGTCCTCCGGGCCTTCGGCTCTGTGTCCATGGCCCACAGCCGCAGTGCCACCCGGTTCTCCATGGTGATGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 72 bp TCAGGAGCCTGGTCTGAGTCTCTGCTCTGGCCTCCTTaGCCCTCCTCCTGCGGGGCTGGCCCGTCTTGGTTC +
Preference number: 6 (lower is better)
Translates to: SGAWSESLLWPP*PSSCGAGPSWF
Trigger: GAACCAAGACGGGCCAGCCCCGCAGGAGGAGGGCAAAGGAGGCCAGAGCAGAGACTCAGACCAGGCTCCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS TCA 72 bp TCGCACTGGAGCCCAGCTCCTGGGCCTTCTCACCATTaGTGCTTGTCATCTGCTCAGGGTCGGGGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: SHWSPAPGPSHH*CLSSAQGRGCG
Trigger: CCCGCAGCCCCGACCCTGAGCAGATGACAAGCATCAATGGTGAGAAGGCCCAGGAGCTGGGCTCCAGTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS GCA 72 bp AGCTCCTGGGCCTTCTCACCATTGATGCTTGTCATCTaGTCAGGGTCGGGGCTGCGGGACCCCTCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SSWAFSPLMLVI*SGSGLRDPSLS
Trigger: GGAGAGCGAGGGGTCCCGCAGCCCCGACCCTGAGCAGATGACAAGCATCAATGGTGAGAAGGCCCAGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS GCA 72 bp GCCCCCGGGGCTGGAGGACAATCAGATCAGGCCCTGTaGAGGTGTGCAGCAGCTGAGCTTTGTAGCGCTGCA +
Preference number: 6 (lower is better)
Translates to: APGAGGQSDQAL*RCAAAELCSAA
Trigger: TGCAGCGCTACAAAGCTCAGCTGCTGCACACCTGCACAGGGCCTGATCTGATTGTCCTCCAGCCCCGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 72 bp CCTCCTTTGCCCTCCTCCTGCGGGGCTGGCCCGTCTTaGTTCTCCTTCCGTATCCGAGGCCTTTCTGCATCC +
Preference number: 6 (lower is better)
Translates to: PPLPSSCGAGPS*FSFRIRGLSAS
Trigger: GGATGCAGAAAGGCCTCGGATACGGAAGGAGAACCAAGACGGGCCAGCCCCGCAGGAGGAGGGCAAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 72 bp GTCGCACTGGAGCCCAGCTCCTGGGCCTTCTCACCATaGATGCTTGTCATCTGCTCAGGGTCGGGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: VALEPSSWAFSP*MLVICSGSGLR
Trigger: CCGCAGCCCCGACCCTGAGCAGATGACAAGCATCAATGGTGAGAAGGCCCAGGAGCTGGGCTCCAGTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 72 bp GCCTCCTTTGCCCTCCTCCTGCGGGGCTGGCCCGTCTaGGTTCTCCTTCCGTATCCGAGGCCTTTCTGCATC +
Preference number: 6 (lower is better)
Translates to: ASFALLLRGWPV*VLLPYPRPFCI
Trigger: GATGCAGAAAGGCCTCGGATACGGAAGGAGAACCAAGACGGGCCAGCCCCGCAGGAGGAGGGCAAAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp CTTGTCATCTGCTCAGGGTCGGGGCTGCGGGACCCCTCGCTCTCCTaGCCCAGAATGTCTGAGCTCCCAGGAGAGCTTGACTGGTCGTCC +
Preference number: 6 (lower is better)
Translates to: LVICSGSGLRDPSLS*PRMSELPGELDWSS
Trigger: GGACGACCAGTCAAGCTCTCCTGGGAGCTCAGACATTCTGGGCAAGGAGAGCGAGGGGTCCCGCAGCCCCGACCCTGAGCAGATGACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp TTGGTTGGTGTCGCACTGGAGCCCAGCTCCTGGGCCTTCTCACCATaGATGCTTGTCATCTGCTCAGGGTCGGGGCTGCGGGACCCCTCG +
Preference number: 6 (lower is better)
Translates to: LVGVALEPSSWAFSP*MLVICSGSGLRDPS
Trigger: CGAGGGGTCCCGCAGCCCCGACCCTGAGCAGATGACAAGCATCAATGGTGAGAAGGCCCAGGAGCTGGGCTCCAGTGCGACACCAACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp TCTGCTCTGGCCTCCTTTGCCCTCCTCCTGCGGGGCTGGCCCGTCTaGGTTCTCCTTCCGTATCCGAGGCCTTTCTGCATCCTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: SALASFALLLRGWPV*VLLPYPRPFCILLQ
Trigger: CTGGAGAAGGATGCAGAAAGGCCTCGGATACGGAAGGAGAACCAAGACGGGCCAGCCCCGCAGGAGGAGGGCAAAGGAGGCCAGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp TGCTGGGACTCGGAGGTGGCCGCCTGTGAAAGCTCCTCCCCCATCTaGATCAGGCTGTCCCGAAGCCGGATCACCAGGACCTTGAGGGAT +
Preference number: 6 (lower is better)
Translates to: CWDSEVAACESSSPI*IRLSRSRITRTLRD
Trigger: ATCCCTCAAGGTCCTGGTGATCCGGCTTCGGGACAGCCTGATCAAGATGGGGGAGGAGCTTTCACAGGCGGCCACCTCCGAGTCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539544.1
CDS TCA 72 bp GGGCCTCAGCTGCGTAGTTTGCCCACTCAAACCTCATaGACTGCTTCCGACCCACTTTGCAGGCCCCCGCCG +
Preference number: 6 (lower is better)
Translates to: GPQLRSLPTQTS*TASDPLCRPPP
Trigger: CGGCGGGGGCCTGCAAAGTGGGTCGGAAGCAGTTCATGAGGTTTGAGTGGGCAAACTACGCAGCTGAGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
CDS TCA 72 bp GGGGGCGTCATGGGGATGAGTCTTCTCTGGCTTGGCTaGGTCCGGGTCCAGCTTGGCCACCATCAACAACAC +
Preference number: 6 (lower is better)
Translates to: GGVMGMSLLWLG*VRVQLGHHQQH
Trigger: GTGTTGTTGATGGTGGCCAAGCTGGACCCGGACTCAGCCAAGCCAGAGAAGACTCATCCCCATGACGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS GCA 72 bp CGACCCACTTGGACCACACGCCCATGCCAAAGGAGCTaGTATCTGCCATCTGGTGCAGGTTCAGCTCCGTCC +
Preference number: 6 (lower is better)
Translates to: RPTWTTRPCQRS*YLPSGAGSAPS
Trigger: GGACGGAGCTGAACCTGCACCAGATGGCAGATAGCAGCTCCTTTGGCATGGGCGTGTGGTCCAAGTGGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS TCA 72 bp CTCACCTCCTTTGGGGCTTCACAGCCCTTCTCTGTCTaGCTCCGAGCTTCACCTGCGTTCCCGGACTTACCC +
Preference number: 6 (lower is better)
Translates to: LTSFGASQPFSV*LRASPAFPDLP
Trigger: GGGTAAGTCCGGGAACGCAGGTGAAGCTCGGAGTCAGACAGAGAAGGGCTGTGAAGCCCCAAAGGAGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS GCA 72 bp CTTCAGGCTTGGACCACACGCCCATGCCAAAGGAGCTaGTATCTGCCATCTGGTGCAGGTTCAGCTCCGTCC +
Preference number: 6 (lower is better)
Translates to: LQAWTTRPCQRS*YLPSGAGSAPS
Trigger: GGACGGAGCTGAACCTGCACCAGATGGCAGATAGCAGCTCCTTTGGCATGGGCGTGTGGTCCAAGCCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
CDS CCA 72 bp GAGTCTTCTCTGGCTTGGCTGAGTCCGGGTCCAGCTTaGCCACCATCAACAACACATCACCCCTCCTCACGC +
Preference number: 6 (lower is better)
Translates to: ESSLAWLSPGPA*PPSTTHHPSSR
Trigger: GCGTGAGGAGGGGTGATGTGTTGTTGATGGTGGCCAAGCTGGACCCGGACTCAGCCAAGCCAGAGAAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 72 bp TTCTCAGCTTTCGGGGCCAAGATCTCGGTGCTGGCCTaGGAGCCACAAGGAGTCCTAGAGGTCTCCCCTTTC +
Preference number: 6 (lower is better)
Translates to: FSAFGAKISVLA*EPQGVLEVSPF
Trigger: GAAAGGGGAGACCTCTAGGACTCCTTGTGGCTCCCAGGCCAGCACCGAGATCTTGGCCCCGAAAGCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp ACCCCTCGCTCTCCTTGCCCAGAATGTCTGAGCTCCCAGGAGAGCTaGACTGGTCGTCCTGAGAGATCTGCTGGCTTCCAGATCTGGTGC +
Preference number: 6 (lower is better)
Translates to: TPRSPCPECLSSQES*TGRPERSAGFQIWC
Trigger: GCACCAGATCTGGAAGCCAGCAGATCTCTCAGGACGACCAGTCAAGCTCTCCTGGGAGCTCAGACATTCTGGGCAAGGAGAGCGAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp TCTCCCCCATTCTCAGATCGTCCCCCAACTCGCCCTGCACTTGGCTaGTCTTCTCCATCTGGGTCTGAGGCTCACCTGTCTTCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: SPPFSDRPPTRPALG*SSPSGSEAHLSSLP
Trigger: AGGCAGAGAAGACAGGTGAGCCTCAGACCCAGATGGAGAAGACAAGCCAAGTGCAGGGCGAGTTGGGGGACGATCTGAGAATGGGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS TCA 72 bp GGGCCTCAGCTGCGTAGTTTGCCCACTCAAACCTCATaGACTGCTTCCGACCCACTTGGACCACACGCCCAT +
Preference number: 6 (lower is better)
Translates to: GPQLRSLPTQTS*TASDPLGPHAH
Trigger: ATGGGCGTGTGGTCCAAGTGGGTCGGAAGCAGTTCATGAGGTTTGAGTGGGCAAACTACGCAGCTGAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS GCA 72 bp TTCACAGCCCTTCTCTGTCTGACTCCGAGCTTCACCTaGGTTCCCGGACTTACCCTGGGGTTGCCCCATCTT +
Preference number: 6 (lower is better)
Translates to: FTALLCLTPSFT*VPGLTLGLPHL
Trigger: AAGATGGGGCAACCCCAGGGTAAGTCCGGGAACGCAGGTGAAGCTCGGAGTCAGACAGAGAAGGGCTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 72 bp CTTCCCAGGAAACCTCCCCACTTTCTCCCAGGGATTTaGGGCCTTACGTGCTTCCCTTCACTCCCTACGTCC +
Preference number: 6 (lower is better)
Translates to: LPRKPPHFLPGI*GLTCFPSLPTS
Trigger: GGACGTAGGGAGTGAAGGGAAGCACGTAAGGCCCCAAATCCCTGGGAGAAAGTGGGGAGGTTTCCTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp TGCTTTCTCCCCCATTCTCAGATCGTCCCCCAACTCGCCCTGCACTaGGCTTGTCTTCTCCATCTGGGTCTGAGGCTCACCTGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: CFLPHSQIVPQLALH*ACLLHLGLRLTCLL
Trigger: GAGAAGACAGGTGAGCCTCAGACCCAGATGGAGAAGACAAGCCAAGTGCAGGGCGAGTTGGGGGACGATCTGAGAATGGGGGAGAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS GCA 72 bp ATGAACTGCTTCCGACCCACTTGGACCACACGCCCATaGCAAAGGAGCTGCTATCTGCCATCTGGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: MNCFRPTWTTRP*QRSCYLPSGAG
Trigger: ACCTGCACCAGATGGCAGATAGCAGCTCCTTTGGCATGGGCGTGTGGTCCAAGTGGGTCGGAAGCAGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539302.5
CDS CCA 72 bp TCTGAGATGCCGAGCATCTCCATGGCACCCTGGAGCTaGGCAAAGGCAGCTGCCGCCTTCTGTTTATCTTCA +
Preference number: 6 (lower is better)
Translates to: SEMPSISMAPWS*AKAAAAFCLSS
Trigger: TGAAGATAAACAGAAGGCGGCAGCTGCCTTTGCCCAGCTCCAGGGTGCCATGGAGATGCTCGGCATCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
CDS CAA 72 bp TTCTCAGATCGTCCCCCAACTCGCCCTGCACTTGGCTaGTCTTCTCCATCTGGGTCTGAGGCTCACCTGTCT +
Preference number: 6 (lower is better)
Translates to: FSDRPPTRPALG*SSPSGSEAHLS
Trigger: AGACAGGTGAGCCTCAGACCCAGATGGAGAAGACAAGCCAAGTGCAGGGCGAGTTGGGGGACGATCTGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp CGTTCTGGAGAGGCGACAGCTAACTGCTTCCTCTGTCTCGCTTCCTaGGCCTCTTTTTCAGTCCCCCGGACCAGTTGCTTAATGAAGCCC +
Preference number: 6 (lower is better)
Translates to: RSGEATANCFLCLAS*ASFSVPRTSCLMKP
Trigger: GGGCTTCATTAAGCAACTGGTCCGGGGGACTGAAAAAGAGGCCAAGGAAGCGAGACAGAGGAAGCAGTTAGCTGTCGCCTCTCCAGAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp CTGCTGGCTTCCAGATCTGGTGCCACTGCTGGACTTGCTGTTGGGTaGGCTGATGGAAATTTCTGGGATCTCTCGTTCTGGAGAGGCGAC +
Preference number: 6 (lower is better)
Translates to: LLASRSGATAGLAVG*ADGNFWDLSFWRGD
Trigger: GTCGCCTCTCCAGAACGAGAGATCCCAGAAATTTCCATCAGCCAACCCAACAGCAAGTCCAGCAGTGGCACCAGATCTGGAAGCCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS GCA 72 bp GTTCAGCTCCTCATACTCGCAGCCCAGGGCCTCAGCTaGGTAGTTTGCCCACTCAAACCTCATGAACTGCTT +
Preference number: 6 (lower is better)
Translates to: VQLLILAAQGLS*VVCPLKPHELL
Trigger: AAGCAGTTCATGAGGTTTGAGTGGGCAAACTACGCAGCTGAGGCCCTGGGCTGCGAGTATGAGGAGCTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 72 bp GAGGCGACAGCTAACTGCTTCCTCTGTCTCGCTTCCTaGGCCTCTTTTTCAGTCCCCCGGACCAGTTGCTTA +
Preference number: 6 (lower is better)
Translates to: EATANCFLCLAS*ASFSVPRTSCL
Trigger: TAAGCAACTGGTCCGGGGGACTGAAAAAGAGGCCAAGGAAGCGAGACAGAGGAAGCAGTTAGCTGTCGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp GGGTTGGCCCGATGGACATGCTCCTCATCCACCTCAGTGATGGTTTaGTCAGCATCAATCCAAAGTCTCACCCTTCCTGCTGGCAGGTCT +
Preference number: 6 (lower is better)
Translates to: GLARWTCSSSTSVMV*SASIQSLTLPAGRS
Trigger: AGACCTGCCAGCAGGAAGGGTGAGACTTTGGATTGATGCTGACAAAACCATCACTGAGGTGGATGAGGAGCATGTCCATCGGGCCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp GGCCAGCTGCAGGTCAAACTGAAAGTCATCCAGGGAATTAATGCCTaGTTAGGGGCCCTCCTGCCCTTCTGTGATGACCACTGGGTGAGA +
Preference number: 6 (lower is better)
Translates to: GQLQVKLKVIQGINA*LGALLPFCDDHWVR
Trigger: TCTCACCCAGTGGTCATCACAGAAGGGCAGGAGGGCCCCTAACAAGGCATTAATTCCCTGGATGACTTTCAGTTTGACCTGCAGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534908.5
CDS GCA 72 bp GGAGACGTTATCCCTCTCAGTATCACTGTCACTGGATaGCACTTCTTCCAAGGCAGCCTGCAGGTCGGCAAT +
Preference number: 6 (lower is better)
Translates to: GDVIPLSITVTG*HFFQGSLQVGN
Trigger: ATTGCCGACCTGCAGGCTGCCTTGGAAGAAGTGGCATCCAGTGACAGTGATACTGAGAGGGATAACGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543971.1
CDS CCA 72 bp GTCTTTTTGGTTGGTGTCGCACTGGAGCCCAGCTCCTaGGCCTTCTCACCATTGATGCTTGTCATCTGCTCA +
Preference number: 6 (lower is better)
Translates to: VFLVGVALEPSS*AFSPLMLVICS
Trigger: TGAGCAGATGACAAGCATCAATGGTGAGAAGGCCCAGGAGCTGGGCTCCAGTGCGACACCAACCAAAAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 72 bp TCCGTCCTGAGATCCAAGTCCAATCCAGCCAGCATCTaGGAGAAAACCAGGAAGTTACTTTCCCCTTCCGGC +
Preference number: 6 (lower is better)
Translates to: SVLRSKSNPASI*EKTRKLLSPSG
Trigger: GCCGGAAGGGGAAAGTAACTTCCTGGTTTTCTCCCAGATGCTGGCTGGATTGGACTTGGATCTCAGGACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CCA 72 bp CCCTTCTGTGATGACCACTGGGTGAGAAGCCCCTCCTaGATGTTATGTCACTCTGTTCAGTTGTCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: PFCDDHWVRSPS*MLCHSVQLSQP
Trigger: AGGCTGAGACAACTGAACAGAGTGACATAACATCCAGGAGGGGCTTCTCACCCAGTGGTCATCACAGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534908.5
ENST00000536204.1
CDS CAA 72 bp TCCAGATCTGGTGCCACTGCTGGACTTGCTGTTGGGTaGGCTGATGGAAATTTCTGGGATCTCTCGTTCTGG +
Preference number: 6 (lower is better)
Translates to: SRSGATAGLAVG*ADGNFWDLSFW
Trigger: CCAGAACGAGAGATCCCAGAAATTTCCATCAGCCAACCCAACAGCAAGTCCAGCAGTGGCACCAGATCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 90 bp CACTGGGTGAGAAGCCCCTCCTGGATGTTATGTCACTCTGTTCAGTaGTCTCAGCCTCCTGGCAGTATCACAGGTGAGGAAACCGATAGA +
Preference number: 6 (lower is better)
Translates to: HWVRSPSWMLCHSVQ*SQPPGSITGEETDR
Trigger: TCTATCGGTTTCCTCACCTGTGATACTGCCAGGAGGCTGAGACAACTGAACAGAGTGACATAACATCCAGGAGGGGCTTCTCACCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534908.5
ENST00000536204.1
CDS TCA 72 bp TGGCCCAAACAGGAAGTCCCATTGTTCCAGAGATCTTaGTATGGCAGAAGTGGGCATGGGGTTTGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: WPKQEVPLFQRS*YGRSGHGVWPL
Trigger: CAAAGGCCAAACCCCATGCCCACTTCTGCCATATCAAGATCTCTGGAACAATGGGACTTCCTGTTTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534908.5
ENST00000536204.1
CDS GCA 72 bp GCAGCAAGGCCTTCAATTCCACTCAGAATTAGATTCTaGTGTGAAGTCGCCTCTGGGTCTCAGGAAGGTTGG +
Preference number: 6 (lower is better)
Translates to: AARPSIPLRIRF*CEVASGSQEGW
Trigger: CCAACCTTCCTGAGACCCAGAGGCGACTTCACAGCAGAATCTAATTCTGAGTGGAATTGAAGGCCTTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539544.1
CDS CAA 72 bp CAGGTCAAACTGAAAGTCATCCAGGGAATTAATGCCTaGTTAGGGGCCCTCCTGCCCTTCTGTGATGACCAC +
Preference number: 6 (lower is better)
Translates to: QVKLKVIQGINA*LGALLPFCDDH
Trigger: GTGGTCATCACAGAAGGGCAGGAGGGCCCCTAACAAGGCATTAATTCCCTGGATGACTTTCAGTTTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534908.5
CDS TCA 72 bp GGCTTTAGCACCGTAGCAAGAGTAAATCCATCCTTCTaGGCCAGCCAGACTTTCTCTGCCTCATACCATCTG +
Preference number: 6 (lower is better)
Translates to: GFSTVARVNPSF*ASQTFSASYHL
Trigger: CAGATGGTATGAGGCAGAGAAAGTCTGGCTGGCTCAGAAGGATGGATTTACTCTTGCTACGGTGCTAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 72 bp CCTGTCTTCTCTGCCTTACTTAAGAGCACCCCTTCTTaGTCCTTCTTATTCTGGGGACCGTCCCACTTACTC +
Preference number: 6 (lower is better)
Translates to: PVFSALLKSTPS*SFLFWGPSHLL
Trigger: GAGTAAGTGGGACGGTCCCCAGAATAAGAAGGACAAAGAAGGGGTGCTCTTAAGTAAGGCAGAGAAGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 72 bp CGATGGACATGCTCCTCATCCACCTCAGTGATGGTTTaGTCAGCATCAATCCAAAGTCTCACCCTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: RWTCSSSTSVMV*SASIQSLTLPA
Trigger: AGCAGGAAGGGTGAGACTTTGGATTGATGCTGACAAAACCATCACTGAGGTGGATGAGGAGCATGTCCATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335473.12
ENST00000407587.6
ENST00000418374.6
ENST00000536101.5
ENST00000539302.5
CDS CAA 72 bp AAGGGTAGGGAGTCTAATTTCCGCCTCTTTCCATTCTaGACTTTCTCCTTTCCTGACGTTCCCCCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: KGRESNFRLFPF*TFSFPDVPPSP
Trigger: TGGAGAAGGGGGAACGTCAGGAAAGGAGAAAGTCAAGAATGGAAAGAGGCGGAAATTAGACTCCCTACCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539544.1
CDS CAA 90 bp CCCATTGTTCCAGAGATCTTGATATGGCAGAAGTGGGCATGGGGTTaGGCCTTTGGTGGCAAGAAAGTCTCGCTTATTATAAGACTATCC +
Preference number: 6 (lower is better)
Translates to: PIVPEILIWQKWAWG*AFGGKKVSLIIRLS
Trigger: GGATAGTCTTATAATAAGCGAGACTTTCTTGCCACCAAAGGCCAAACCCCATGCCCACTTCTGCCATATCAAGATCTCTGGAACAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534908.5
ENST00000536204.1
CDS CCA 72 bp ATCACCAGGACCTTGAGGGATCCCTTGAGCAATTTCTaGGAACCACTGAGGGTCAAAGCAAAGAAGAATTTC +
Preference number: 6 (lower is better)
Translates to: ITRTLRDPLSNF*EPLRVKAKKNF
Trigger: GAAATTCTTCTTTGCTTTGACCCTCAGTGGTTCCCAGAAATTGCTCAAGGGATCCCTCAAGGTCCTGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539544.1
CDS CAA 72 bp CCAGAGATCTTGATATGGCAGAAGTGGGCATGGGGTTaGGCCTTTGGTGGCAAGAAAGTCTCGCTTATTATA +
Preference number: 6 (lower is better)
Translates to: PEILIWQKWAWG*AFGGKKVSLII
Trigger: TATAATAAGCGAGACTTTCTTGCCACCAAAGGCCAAACCCCATGCCCACTTCTGCCATATCAAGATCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534908.5
ENST00000536204.1
CDS CCA 72 bp CTTGATATGGCAGAAGTGGGCATGGGGTTTGGCCTTTaGTGGCAAGAAAGTCTCGCTTATTATAAGACTATC +
Preference number: 6 (lower is better)
Translates to: LDMAEVGMGFGL*WQESLAYYKTI
Trigger: GATAGTCTTATAATAAGCGAGACTTTCTTGCCACCAAAGGCCAAACCCCATGCCCACTTCTGCCATATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534908.5
ENST00000536204.1
CDS CCA 72 bp CCAAGAATAGCCCCAGCCTGTTGCTTTTACCTGAACTaGTTCCTACTTCTGGAGGTATTTCTTCATTATGCT +
Preference number: 6 (lower is better)
Translates to: PRIAPACCFYLN*FLLLEVFLHYA
Trigger: AGCATAATGAAGAAATACCTCCAGAAGTAGGAACCAGTTCAGGTAAAAGCAACAGGCTGGGGCTATTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418374.6
ENST00000536101.5