RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO18A (Homo sapiens)

Ensembl gene IDs: ENSG00000196535

Ensembl transcript IDs: ENST00000527312.5, ENST00000527372.7, ENST00000528322.6, ENST00000528564.2, ENST00000529578.5, ENST00000529889.1, ENST00000530254.6, ENST00000530557.2, ENST00000531253.5, ENST00000531267.5, ENST00000531438.5, ENST00000531892.5, ENST00000532143.2, ENST00000533112.5, ENST00000533399.1, ENST00000533420.3, ENST00000533652.1, ENST00000588791.1, ENST00000590242.5, ENST00000628822.2, ENST00000636100.1

Found 2177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCGGGAGCCGCGGAGCTGGGTGCGGAGCAGGGGCACGTCGAGCTaGAGGAGCCCAGCCTCGCAGTGGTCTCCCGAGGGCAGGTCCAGC +
Preference number: 1 (lower is better)
Translates to: RREPRSWVRSRGTSS*RSPASQWSPEGRSS
Trigger: GCTGGACCTGCCCTCGGGAGACCACTGCGAGGCTGGGCTCCTGCAGCTCGACGTGCCCCTGCTCCGCACCCAGCTCCGCGGCTCCCGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp GTGGTAAAGGTTTTCCGCATGCTGGTGGCCCGGCGCAGTGCCAGCTaGGAGCCGCCCTCCAGGCCCGCGATGGAGCCAGAGAGCACCGTG +
Preference number: 1 (lower is better)
Translates to: VVKVFRMLVARRSAS*EPPSRPAMEPESTV
Trigger: CACGGTGCTCTCTGGCTCCATCGCGGGCCTGGAGGGCGGCTCGCAGCTGGCACTGCGCCGGGCCACCAGCATGCGGAAAACCTTTACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp CATGCCTGTGGTAAAGGTTTTCCGCATGCTGGTGGCCCGGCGCAGTaGCAGCTGCGAGCCGCCCTCCAGGCCCGCGATGGAGCCAGAGAG +
Preference number: 1 (lower is better)
Translates to: HACGKGFPHAGGPAQ*QLRAALQARDGARE
Trigger: CTCTCTGGCTCCATCGCGGGCCTGGAGGGCGGCTCGCAGCTGGCACTGCGCCGGGCCACCAGCATGCGGAAAACCTTTACCACAGGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp GGGCCCTGGCGGAAGGAGGTGGAGCGCTGCAGGGTGCCACCCTTGTaGTGGTGCTTGAAGATGGCTGAGGACAGCTCCTCCAGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: GPWRKEVERCRVPPL*WCLKMAEDSSSRLQ
Trigger: CTGCAGCCTGGAGGAGCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
3UTR GCA 90 bp GCCTCAGCGAGGAGCATGTCCTTCTCCCGCTGCAGCTTCTCCCGCTaGAGCTTCTCCCGCTGGGCCTCCTCATGCGCCTGCGAGAGCTCA +
Preference number: 1 (lower is better)
Translates to: ASARSMSFSRCSFSR*SFSRWASSCACESS
Trigger: TGAGCTCTCGCAGGCGCATGAGGAGGCCCAGCGGGAGAAGCTGCAGCGGGAGAAGCTGCAGCGGGAGAAGGACATGCTCCTCGCTGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 90 bp CAGCAGGGCCTTGGTGCGCTTCAGGTCCTTCCGCAGCCGCTTCTCTaGCTCAAAGTCCCGCCGGTTCACCTGGTCGCTGAGGGTGGCGAG +
Preference number: 1 (lower is better)
Translates to: QQGLGALQVLPQPLL*LKVPPVHLVAEGGE
Trigger: CTCGCCACCCTCAGCGACCAGGTGAACCGGCGGGACTTTGAGTCAGAGAAGCGGCTGCGGAAGGACCTGAAGCGCACCAAGGCCCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 90 bp GCCGTCAGTCGCTGGCACTTCTTCTTGAGCTGCTGCAGAGCCCGCTaGCTCTCCTCACTATCTGCCTGCAGGTCCCCGAGCCGCCGTTCC +
Preference number: 1 (lower is better)
Translates to: AVSRWHFFLSCCRAR*LSSLSACRSPSRRS
Trigger: GGAACGGCGGCTCGGGGACCTGCAGGCAGATAGTGAGGAGAGTCAGCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGCGACTGACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp GTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTaGGCCCAGCTTCAGCAGCTTCTTTGGTGGCTCCCGCAGCCCCCA +
Preference number: 1 (lower is better)
Translates to: VGTQPSGPTHGGQTA*AQLQQLLWWLPQPP
Trigger: TGGGGGCTGCGGGAGCCACCAAAGAAGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp CCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTaGTTGCGCCCAGCTTCAGCAGCTTCTTTGGTGGCTCCCGCAGCC +
Preference number: 1 (lower is better)
Translates to: PSRYAAFWAHSWRAN*LRPASAASLVAPAA
Trigger: GGCTGCGGGAGCCACCAAAGAAGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp TGGCGGAAGGAGGTGGAGCGCTGCAGGGTGCCACCCTTGTGCTGGTaGTTGAAGATGGCTGAGGACAGCTCCTCCAGGCTGCAGCCCAGT +
Preference number: 1 (lower is better)
Translates to: WRKEVERCRVPPLCW*LKMAEDSSSRLQPS
Trigger: ACTGGGCTGCAGCCTGGAGGAGCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
3UTR CCA 90 bp CCATCTCCAGTTCGTGCTTCTTGCGGCTCGCCTCGGCCTCCTTCCTaGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCT +
Preference number: 1 (lower is better)
Translates to: PSPVRASCGSPRPPS*QARPSPPWCPGAAS
Trigger: AGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGGAGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 90 bp GGAAGGAGGTGGAGCGCTGCAGGGTGCCACCCTTGTGCTGGTGCTTaGAGATGGCTGAGGACAGCTCCTCCAGGCTGCAGCCCAGTAGGT +
Preference number: 1 (lower is better)
Translates to: GRRWSAAGCHPCAGA*RWLRTAPPGCSPVG
Trigger: ACCTACTGGGCTGCAGCCTGGAGGAGCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
3UTR GCA 90 bp TTGTTCCCGCTGATGCCCGCGATGGTGGCCAGGTACTGCACCAGATaGTGGCAGCTGGTGGTCTTGCCACTGCCACTACTGCCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: LFPLMPAMVARYCTR*WQLVVLPLPLLPRR
Trigger: CCTCCTGGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCCAGCATCTGGTGCAGTACCTGGCCACCATCGCGGGCATCAGCGGGAACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp GCCTGCAGGTCCCCGAGCCGCCGTTCCAGCTGCCTCTTGTTCTGCTaGTCCACCTCCAGCTTGTCCTCAAACTCCTGCTGGAGCCGTTTC +
Preference number: 1 (lower is better)
Translates to: ACRSPSRRSSCLLFC*STSSLSSNSCWSRF
Trigger: GAAACGGCTCCAGCAGGAGTTTGAGGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGAACGGCGGCTCGGGGACCTGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp GCTGGGAGCACTGTTCTTCAGGTGGTCCAGCATGAGCTGGGCATCTaGCAGCAGGGCCTTGGTGCGCTTCAGGTCCTTCCGCAGCCGCTT +
Preference number: 1 (lower is better)
Translates to: AGSTVLQVVQHELGI*QQGLGALQVLPQPL
Trigger: AAGCGGCTGCGGAAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCACCTGAAGAACAGTGCTCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp CACAGGCCCTGGGGTGAGAGGGCTGCCAACCACTCCCCTGGGCTATaGGTTAGTCTCCGTCAGCTTGGCCTCTGTGTCGCTGTCACTCAG +
Preference number: 1 (lower is better)
Translates to: HRPWGERAANHSPGL*VSLRQLGLCVAVTQ
Trigger: CTGAGTGACAGCGACACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTGGTTGGCAGCCCTCTCACCCCAGGGCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp CCAGGTAGCCCCTGCAGGCTGCTTGGAACAGGGTTAGGTTCCTGCTaGTTTGTTCATCCCGCTGCTCCTCCAGCCGTGCCAAGGTGCCCG +
Preference number: 1 (lower is better)
Translates to: PGSPCRLLGTGLGSC*FVHPAAPPAVPRCP
Trigger: CGGGCACCTTGGCACGGCTGGAGGAGCAGCGGGATGAACAAACCAGCAGGAACCTAACCCTGTTCCAAGCAGCCTGCAGGGGCTACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp GGCTCGCCTCGGCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTaGTGTCCCGGAGCTGCCTCTGTAGCCGCTTGTTCTGTTCCTTCT +
Preference number: 1 (lower is better)
Translates to: GSPRPPSWQARPSPP*CPGAASVAACSVPS
Trigger: AGAAGGAACAGAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCGAGGCGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp TCCAGGCTGCAGCCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATaGCGGGCAAACTGCTTGCGCCCAGCCACTGCAGGTTACCTTTGG +
Preference number: 1 (lower is better)
Translates to: SRLQPSRYAAFWAHS*RANCLRPATAGYLW
Trigger: CCAAAGGTAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGGCTGCAGCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
3UTR TCA 90 bp AGTGGCACTGGTCTGACACTTTGGGGAGCAGGCCAGAGACCAGGGTaGTGCCCTCACGGTCCCCATCAGAATCCTGCCTCTGCCCACCAC +
Preference number: 1 (lower is better)
Translates to: SGTGLTLWGAGQRPG*CPHGPHQNPASAHH
Trigger: GTGGTGGGCAGAGGCAGGATTCTGATGGGGACCGTGAGGGCATCACCCTGGTCTCTGGCCTGCTCCCCAAAGTGTCAGACCAGTGCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 90 bp AGGCCAGAGACCAGGGTGATGCCCTCACGGTCCCCATCAGAATCCTaGCTCTGCCCACCACCCCCAGGACCAATCCAGACTTTGCCTGAG +
Preference number: 1 (lower is better)
Translates to: RPETRVMPSRSPSES*LCPPPPGPIQTLPE
Trigger: CTCAGGCAAAGTCTGGATTGGTCCTGGGGGTGGTGGGCAGAGGCAGGATTCTGATGGGGACCGTGAGGGCATCACCCTGGTCTCTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 90 bp CTGGGTCTGCAGTTCCTTCATCTCCTTCTCAGCCCGGAGCCTCTCTaGTGTCTCCGCGTCCAGCAGCTGGGAGGCGGACTCTCCTGTGTT +
Preference number: 1 (lower is better)
Translates to: LGLQFLHLLLSPEPL*CLRVQQLGGGLSCV
Trigger: AACACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGAGACAGCAGAGAGGCTCCGGGCTGAGAAGGAGATGAAGGAACTGCAGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp TCGTGGTTGCGGACCTGCTGGCCCTCCAGGTGCAGCTTGGTGTCTTaGAGCTCAGCCGTCAGTCGCTGGCACTTCTTCTTGAGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: SWLRTCWPSRCSLVS*SSAVSRWHFFLSCC
Trigger: GCAGCAGCTCAAGAAGAAGTGCCAGCGACTGACGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp CCCAGCAGCACCGGAGAGCCCCTCCGCACCTCATTCTTAAGAACCTaGACCCGGCTCTCCTCACCAGCGTCTCCAGCTGCACAGAGAAAG +
Preference number: 1 (lower is better)
Translates to: PSSTGEPLRTSFLRT*TRLSSPASPAAQRK
Trigger: CTTTCTCTGTGCAGCTGGAGACGCTGGTGAGGAGAGCCGGGTCCAGGTTCTTAAGAATGAGGTGCGGAGGGGCTCTCCGGTGCTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR CCA 90 bp TCCAGGCTGCAGCCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATaGCGGGCAAACTGCTTGCGCCCAGCTTCAGCAGCTTCTTTGGTG +
Preference number: 1 (lower is better)
Translates to: SRLQPSRYAAFWAHS*RANCLRPASAASLV
Trigger: CACCAAAGAAGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGGCTGCAGCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp TCCTCAAAGGAGGCTCCGCGGGCTGACCCACCCTGCTCAGGGTTCTaGAAGCCCGGGGTGTCGACAATCATCATGGAGCAGAGTGAGTGC +
Preference number: 1 (lower is better)
Translates to: SSKEAPRADPPCSGF*KPGVSTIIMEQSEC
Trigger: GCACTCACTCTGCTCCATGATGATTGTCGACACCCCGGGCTTCCAGAACCCTGAGCAGGGTGGGTCAGCCCGCGGAGCCTCCTTTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp CTGCCCGCCTTTCATCCACCACGATGTAGTTACGCCCGTGTTTCTTaGTCAGGTGCGGGGCCAGGACATCAAAGCGGCGGCGGAACTCGG +
Preference number: 1 (lower is better)
Translates to: LPAFHPPRCSYARVS*SGAGPGHQSGGGTR
Trigger: CCGAGTTCCGCCGCCGCTTTGATGTCCTGGCCCCGCACCTGACCAAGAAACACGGGCGTAACTACATCGTGGTGGATGAAAGGCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp TCTCGCTTGCTGGGAGCACTGTTCTTCAGGTGGTCCAGCATGAGCTaGGCATCTGCCAGCAGGGCCTTGGTGCGCTTCAGGTCCTTCCGC +
Preference number: 1 (lower is better)
Translates to: SRLLGALFFRWSSMS*ASASRALVRFRSFR
Trigger: GCGGAAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCACCTGAAGAACAGTGCTCCCAGCAAGCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp TGCTTCTTCTCCAGTTCGTGGTTGCGGACCTGCTGGCCCTCCAGGTaGAGCTTGGTGTCTTGCAGCTCAGCCGTCAGTCGCTGGCACTTC +
Preference number: 1 (lower is better)
Translates to: CFFSSSWLRTCWPSR*SLVSCSSAVSRWHF
Trigger: GAAGTGCCAGCGACTGACGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGAACTGGAGAAGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp TCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTaGCTCTGTAGCCGCTTGTTCTGTTCCTTCTCCCGGTTCTCGGCT +
Preference number: 1 (lower is better)
Translates to: SFLASSPISSLVSRS*LCSRLFCSFSRFSA
Trigger: AGCCGAGAACCGGGAGAAGGAACAGAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp TTGAGCTGGGCAATCTCTCGCTTGCTGGGAGCACTGTTCTTCAGGTaGTCCAGCATGAGCTGGGCATCTGCCAGCAGGGCCTTGGTGCGC +
Preference number: 1 (lower is better)
Translates to: LSWAISRLLGALFFR*SSMSWASASRALVR
Trigger: GCGCACCAAGGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCACCTGAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCCAGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 90 bp CTGGCGCAAGGTGTGCAGGACGCTGGACTCATTGAGGTACACCAGTaGGGCCAGATCCTCCAGACGGTCGCAGGAGGGAGCATTAGCCTT +
Preference number: 1 (lower is better)
Translates to: LAQGVQDAGLIEVHQ*GQILQTVAGGSISL
Trigger: AAGGCTAATGCTCCCTCCTGCGACCGTCTGGAGGATCTGGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCCTGCACACCTTGCGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 90 bp GCTGGCAGCTGGTGGTCTTGCCACTGCCACTACTGCCCAGGAGGATaGTTGACTGATCCTGACGGCTCATCAGCATCGCCCTGTATGCGG +
Preference number: 1 (lower is better)
Translates to: AGSWWSCHCHYCPGG*LTDPDGSSASPCMR
Trigger: CCGCATACAGGGCGATGCTGATGAGCCGTCAGGATCAGTCAATCATCCTCCTGGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 90 bp CAATCTCTCGCTTGCTGGGAGCACTGTTCTTCAGGTGGTCCAGCATaGGCTGGGCATCTGCCAGCAGGGCCTTGGTGCGCTTCAGGTCCT +
Preference number: 1 (lower is better)
Translates to: QSLACWEHCSSGGPA*AGHLPAGPWCASGP
Trigger: AGGACCTGAAGCGCACCAAGGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCACCTGAAGAACAGTGCTCCCAGCAAGCGAGAGATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp CAGAATCCTGCCTCTGCCCACCACCCCCAGGACCAATCCAGACTTTaGCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGA +
Preference number: 1 (lower is better)
Translates to: QNPASAHHPQDQSRL*LSLKEQAGKLAQPG
Trigger: TCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAGTCTGGATTGGTCCTGGGGGTGGTGGGCAGAGGCAGGATTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 90 bp ATCCTGACGGCTCATCAGCATCGCCCTGTATGCGGTCTGGGCCACTaGATAGATGTGGGGTGCCATGTCCTCCCGCCGACAACCCTTGAA +
Preference number: 1 (lower is better)
Translates to: ILTAHQHRPVCGLGH*IDVGCHVLPPTTLE
Trigger: TTCAAGGGTTGTCGGCGGGAGGACATGGCACCCCACATCTATGCAGTGGCCCAGACCGCATACAGGGCGATGCTGATGAGCCGTCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 90 bp GCAGCTGGTGGTCTTGCCACTGCCACTACTGCCCAGGAGGATGATTaGCTGATCCTGACGGCTCATCAGCATCGCCCTGTATGCGGTCTG +
Preference number: 1 (lower is better)
Translates to: AAGGLATATTAQEDD*LILTAHQHRPVCGL
Trigger: CAGACCGCATACAGGGCGATGCTGATGAGCCGTCAGGATCAGTCAATCATCCTCCTGGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 90 bp GCTTGGTGTCTTGCAGCTCAGCCGTCAGTCGCTGGCACTTCTTCTTaGGCTGCTGCAGAGCCCGCTGACTCTCCTCACTATCTGCCTGCA +
Preference number: 1 (lower is better)
Translates to: AWCLAAQPSVAGTSS*AAAEPADSPHYLPA
Trigger: TGCAGGCAGATAGTGAGGAGAGTCAGCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGCGACTGACGGCTGAGCTGCAAGACACCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp CAGCATCGCCCTGTATGCGGTCTGGGCCACTGCATAGATGTGGGGTaGCATGTCCTCCCGCCGACAACCCTTGAACATGTGCATCACCTT +
Preference number: 1 (lower is better)
Translates to: QHRPVCGLGHCIDVG*HVLPPTTLEHVHHL
Trigger: AAGGTGATGCACATGTTCAAGGGTTGTCGGCGGGAGGACATGGCACCCCACATCTATGCAGTGGCCCAGACCGCATACAGGGCGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp GCCTTCTCAACGTCATCCTCATCCACATCCAGGATGGCCCCATCGTaGTCCAGCTTCACACGCACCTTCCCCTCAGGCAAGTTGAGCTCC +
Preference number: 1 (lower is better)
Translates to: AFSTSSSSTSRMAPS*SSFTRTFPSGKLSS
Trigger: GGAGCTCAACTTGCCTGAGGGGAAGGTGCGTGTGAAGCTGGACCACGATGGGGCCATCCTGGATGTGGATGAGGATGACGTTGAGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp CTCGCCACCTGCATCATCATCATCCACTTCCCCGTTGATCTCCGCTaGCCGGATGAGACGGGCCTCCATCACCTCCATTTCCATAACCTC +
Preference number: 1 (lower is better)
Translates to: LATCIIIIHFPVDLR*PDETGLHHLHFHNL
Trigger: GAGGTTATGGAAATGGAGGTGATGGAGGCCCGTCTCATCCGGGCAGCGGAGATCAACGGGGAAGTGGATGATGATGATGCAGGTGGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp ATCTTAGCTTCCTGCCTGCTCACCAGGGACTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGGCTCTGGAGGGCTTGTAGCTTCTCC +
Preference number: 1 (lower is better)
Translates to: ILASCLLTRDLSTMD*SRNSTWLWRACSFS
Trigger: GGAGAAGCTACAAGCCCTCCAGAGCCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAAGTCCCTGGTGAGCAGGCAGGAAGCTAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp GCCTGCAGGTCCCCGATGCGCTTGAATGCCAACTTTAGGTCAGCCTaGAGGCTCTGGTTAGCAGCCTCCAGGCTTTCTAGATCCATCTCC +
Preference number: 1 (lower is better)
Translates to: ACRSPMRLNANFRSA*RLWLAASRLSRSIS
Trigger: GGAGATGGATCTAGAAAGCCTGGAGGCTGCTAACCAGAGCCTGCAGGCTGACCTAAAGTTGGCATTCAAGCGCATCGGGGACCTGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 90 bp TCCAGCATCTGGATGGTCCCTGCCTGCTCATCCAGCTCTTCTTCCTaGTCCTTGACTTTGGCCTCCAGGTCCCGGAGCTGTTTCTTGACC +
Preference number: 1 (lower is better)
Translates to: SSIWMVPACSSSSSS*SLTLASRSRSCFLT
Trigger: GGTCAAGAAACAGCTCCGGGACCTGGAGGCCAAAGTCAAGGATCAGGAAGAAGAGCTGGATGAGCAGGCAGGGACCATCCAGATGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp TTCCTCAGGCTTGGCCAGTGGCACAATCCCAAACACATTGTTCTCTaGCAAGTGGTTGAGGTGGAGCTCTGTCCTGAGGGTGCCATCCCC +
Preference number: 1 (lower is better)
Translates to: FLRLGQWHNPKHIVL*QVVEVELCPEGAIP
Trigger: GGGGATGGCACCCTCAGGACAGAGCTCCACCTCAACCACTTGGCAGAGAACAATGTGTTTGGGATTGTGCCACTGGCCAAGCCTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp GCCCAGCACCTTCATGGCCGCCTGCAGCTTACTAAACTGCTGAGCTaGCTTCTGCTTTTCCTCAGGCTTGGCCAGTGGCACAATCCCAAA +
Preference number: 1 (lower is better)
Translates to: AQHLHGRLQLTKLLS*LLLFLRLGQWHNPK
Trigger: TTTGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGCAGAAGGCAGCTCAGCAGTTTAGTAAGCTGCAGGCGGCCATGAAGGTGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp CTTTCAAACTCCAGGCGTGTCTCCAGCTCCCGTATCTTAGCTTCCTaGCTGCTCACCAGGGACTTGTCCACCATGGACTGCTCCAGGAAC +
Preference number: 1 (lower is better)
Translates to: LSNSRRVSSSRILAS*LLTRDLSTMDCSRN
Trigger: GTTCCTGGAGCAGTCCATGGTGGACAAGTCCCTGGTGAGCAGGCAGGAAGCTAAGATACGGGAGCTGGAGACACGCCTGGAGTTTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp GTTCCCGCCCATGCTTATTCAGGAGTCAGAGCAATCCCGGGGATCTaGAGTTATAGAGGAGGATCTAGCAGGCTGGCTTTGAGCCTGGCA +
Preference number: 1 (lower is better)
Translates to: VPAHAYSGVRAIPGI*SYRGGSSRLALSLA
Trigger: TGCCAGGCTCAAAGCCAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAGCATGGGCGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 90 bp GCTCGATGTTCTCCTCCTTGTATCTTTCCAACTCCTGCACGAAGGTaGGCTCGTGGAAGAGCCTCTGCAGCCGGTCTTGGGTGTAGTTGT +
Preference number: 1 (lower is better)
Translates to: ARCSPPCIFPTPARR*ARGRASAAGLGCSC
Trigger: ACAACTACACCCAAGACCGGCTGCAGAGGCTCTTCCACGAGCGCACCTTCGTGCAGGAGTTGGAAAGATACAAGGAGGAGAACATCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp AGCTGCTCCTCCAGCGCTGTCTTGGCTTTGGCGATGTCATCAATCTaGAGGTGCAGGTCTTCGATCTCCACCTCCATTGCTTTCCGTGCT +
Preference number: 1 (lower is better)
Translates to: SCSSSAVLALAMSSI*RCRSSISTSIAFRA
Trigger: AGCACGGAAAGCAATGGAGGTGGAGATCGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp CTTTCCCCCACCTCTTCCACGTGGAGACATCAGACACCCATAGCCTaGAAAGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCA +
Preference number: 1 (lower is better)
Translates to: LSPTSSTWRHQTPIA*KVPLTEEGQGVSHA
Trigger: TGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAGGTGGGGGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR CCA 90 bp GCTTGGTGTAGTTCAGCCAGCCAGTCACATTGTACTCTACCCAGTTaGTGCCATGGCTGTGGCCCAGGAGAAAGTGGTGTGGTTTGCTGC +
Preference number: 1 (lower is better)
Translates to: AWCSSASQSHCTLPS*CHGCGPGESGVVCC
Trigger: GCAGCAAACCACACCACTTTCTCCTGGGCCACAGCCATGGCACCAACTGGGTAGAGTACAATGTGACTGGCTGGCTGAACTACACCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp TCCCCGATGCGCTTGAATGCCAACTTTAGGTCAGCCTGCAGGCTCTaGTTAGCAGCCTCCAGGCTTTCTAGATCCATCTCCAGTTCGTGC +
Preference number: 1 (lower is better)
Translates to: SPMRLNANFRSACRL*LAASRLSRSISSSC
Trigger: GCACGAACTGGAGATGGATCTAGAAAGCCTGGAGGCTGCTAACCAGAGCCTGCAGGCTGACCTAAAGTTGGCATTCAAGCGCATCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp CCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTaGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCAG +
Preference number: 1 (lower is better)
Translates to: PLCRCHSDNCGSIAV*RCCREGRAHHLTDQ
Trigger: CTGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000636100.1
3UTR TCA 90 bp TCTCCTCACCAGCGTCTCCAGCTGCACAGAGAAAGGACTGCTCTCTaGAGGGTGAAGATGGAGATGACATTCCCGAGTCGTTCTTGGGAG +
Preference number: 1 (lower is better)
Translates to: SPHQRLQLHRERTAL*RVKMEMTFPSRSWE
Trigger: CTCCCAAGAACGACTCGGGAATGTCATCTCCATCTTCACCCTTCAGAGAGCAGTCCTTTCTCTGTGCAGCTGGAGACGCTGGTGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR TCA 90 bp GGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTaGGGACTCATGTCTAATGAGCACCGGCCAAAACTTCCATCTTCA +
Preference number: 1 (lower is better)
Translates to: GGREVGRMTRAQDTE*GLMSNEHRPKLPSS
Trigger: TGAAGATGGAAGTTTTGGCCGGTGCTCATTAGACATGAGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR TCA 90 bp GCTCCTGGACTCCTCTGGGGCCAAGGGAATTGTCTCCTTCTCAACTaGAACTTGGAGAAGCACTGGTCATGTGACAATGCACAGCCAGCC +
Preference number: 1 (lower is better)
Translates to: APGLLWGQGNCLLLN*NLEKHWSCDNAQPA
Trigger: GGCTGGCTGTGCATTGTCACATGACCAGTGCTTCTCCAAGTTTCAGTTGAGAAGGAGACAATTCCCTTGGCCCCAGAGGAGTCCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 90 bp TCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGGCTTTaGGCCTGGCAAAGGGCCAGATTTGCCTTCTGCAACATCTTAGGG +
Preference number: 1 (lower is better)
Translates to: SRGSAVIEEDLAGWL*AWQRARFAFCNILG
Trigger: CCCTAAGATGTTGCAGAAGGCAAATCTGGCCCTTTGCCAGGCTCAAAGCCAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 90 bp CCGCAGCTGCTGGATCTCCTCGTCTTTGTTCCGGATCTGCTCCTCTaGCAGCTGTACTTCGATGAGGGGCCTCACTGTGGTAAAAAGCTT +
Preference number: 1 (lower is better)
Translates to: PQLLDLLVFVPDLLL*QLYFDEGPHCGKKL
Trigger: AAGCTTTTTACCACAGTGAGGCCCCTCATCGAAGTACAGCTGTCAGAGGAGCAGATCCGGAACAAAGACGAGGAGATCCAGCAGCTGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp GCTTGTGTCTTCCTTGGCCAATCCCCTCATTCCACTACCTCTGCCTaGCCCAAAATGAGCTGCCTAGGCTCTTTAAGTGGCACTGGTCTG +
Preference number: 1 (lower is better)
Translates to: ACVFLGQSPHSTTSA*PKMSCLGSLSGTGL
Trigger: CAGACCAGTGCCACTTAAAGAGCCTAGGCAGCTCATTTTGGGGCAGGCAGAGGTAGTGGAATGAGGGGATTGGCCAAGGAAGACACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 90 bp TGGTGTAGTTCAGCCAGCCAGTCACATTGTACTCTACCCAGTTGGTaGCATGGCTGTGGCCCAGGAGAAAGTGGTGTGGTTTGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: WCSSASQSHCTLPSW*HGCGPGESGVVCCC
Trigger: ACAGCAGCAAACCACACCACTTTCTCCTGGGCCACAGCCATGGCACCAACTGGGTAGAGTACAATGTGACTGGCTGGCTGAACTACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp TCCTCCAGCGCTGTCTTGGCTTTGGCGATGTCATCAATCTGCAGGTaGAGGTCTTCGATCTCCACCTCCATTGCTTTCCGTGCTTTCACG +
Preference number: 1 (lower is better)
Translates to: SSSAVLALAMSSICR*RSSISTSIAFRAFT
Trigger: CGTGAAAGCACGGAAAGCAATGGAGGTGGAGATCGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp AGGTCCTCATTCTCATCACTCTCCATCTCATCCTCAATGGCAGCCTaGAGGTCCCCGATGCGCTTGAATGCCAACTTTAGGTCAGCCTGC +
Preference number: 1 (lower is better)
Translates to: RSSFSSLSISSSMAA*RSPMRLNANFRSAC
Trigger: GCAGGCTGACCTAAAGTTGGCATTCAAGCGCATCGGGGACCTGCAGGCTGCCATTGAGGATGAGATGGAGAGTGATGAGAATGAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp ATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCAAGTTGAGTTTATaGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGA +
Preference number: 1 (lower is better)
Translates to: ITSPQPQAFPLKLSL*SRPPGQSRREAVLG
Trigger: TCCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGGTTGAGGACTTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR TCA 90 bp TGTTGTGTCTGGGATAAGTGTGTGGGGGCAGGGAGGTTGGAAGAATaGCACGGGCTCAGGACACAGAGTGAGGACTCATGTCTAATGAGC +
Preference number: 1 (lower is better)
Translates to: CCVWDKCVGAGRLEE*HGLRTQSEDSCLMS
Trigger: GCTCATTAGACATGAGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCACACACTTATCCCAGACACAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR GCA 90 bp GGAGGATCTAGCAGGCTGGCTTTGAGCCTGGCAAAGGGCCAGATTTaGCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACA +
Preference number: 1 (lower is better)
Translates to: GGSSRLALSLAKGQI*LLQHLRDQRYHECT
Trigger: TGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGCAAATCTGGCCCTTTGCCAGGCTCAAAGCCAGCCTGCTAGATCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 90 bp ATGGACCAGCCACACCTTCTCCGTCTCATTCCAGGCCTCTTCTGCTaGAATCTGTTCTTCTGTTTTCGCTATGAGCCAGGCACAGGGGAA +
Preference number: 1 (lower is better)
Translates to: MDQPHLLRLIPGLFC*NLFFCFRYEPGTGE
Trigger: TTCCCCTGTGCCTGGCTCATAGCGAAAACAGAAGAACAGATTGCAGCAGAAGAGGCCTGGAATGAGACGGAGAAGGTGTGGCTGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 90 bp GACTCCTCTGGGGCCAAGGGAATTGTCTCCTTCTCAACTGAAACTTaGAGAAGCACTGGTCATGTGACAATGCACAGCCAGCCTGTGGCA +
Preference number: 1 (lower is better)
Translates to: DSSGAKGIVSFSTET*RSTGHVTMHSQPVA
Trigger: TGCCACAGGCTGGCTGTGCATTGTCACATGACCAGTGCTTCTCCAAGTTTCAGTTGAGAAGGAGACAATTCCCTTGGCCCCAGAGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CCA 90 bp GGTACACCCAAAATAAAGATGGGCTTTGGTGGCCCTAAAGGCTCCTaGACTCCTCTGGGGCCAAGGGAATTGTCTCCTTCTCAACTGAAA +
Preference number: 1 (lower is better)
Translates to: GTPKIKMGFGGPKGS*TPLGPRELSPSQLK
Trigger: TTTCAGTTGAGAAGGAGACAATTCCCTTGGCCCCAGAGGAGTCCAGGAGCCTTTAGGGCCACCAAAGCCCATCTTTATTTTGGGTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 90 bp GAATTGTCTCCTTCTCAACTGAAACTTGGAGAAGCACTGGTCATGTaGCAATGCACAGCCAGCCTGTGGCATGTTCTACCAGCACCTCTC +
Preference number: 1 (lower is better)
Translates to: ELSPSQLKLGEALVM*QCTASLWHVLPAPL
Trigger: GAGAGGTGCTGGTAGAACATGCCACAGGCTGGCTGTGCATTGTCACATGACCAGTGCTTCTCCAAGTTTCAGTTGAGAAGGAGACAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 90 bp CCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGATCAGCCCTGAACTaGTGTAGTTGGAATGGGTTTACCTTAAATAGGTCATTGCACATA +
Preference number: 1 (lower is better)
Translates to: PGQSRREAVLGSALN*CSWNGFTLNRSLHI
Trigger: TATGTGCAATGACCTATTTAAGGTAAACCCATTCCAACTACAGCAGTTCAGGGCTGATCCAAGCACTGCCTCCCTCCTGCTCTGTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR CCA 90 bp AATTATTTCCACATGGGTCTGCTCCAGCCCTCGTCCGCAAAACCCTaGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGC +
Preference number: 1 (lower is better)
Translates to: NYFHMGLLQPSSAKP*RMDTMMCSSLPTLS
Trigger: GCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGGTTTTGCGGACGAGGGCTGGAGCAGACCCATGTGGAAATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CCA 90 bp TGGGAAGAAATGTCCTGGAGCTCTGCCTCTAGAGACACAACCTTCTaGGTGAACCCTGCAATGTCCATGTCTTTTTCCTCTAGTTGCTGC +
Preference number: 1 (lower is better)
Translates to: WEEMSWSSASRDTTF*VNPAMSMSFSSSCC
Trigger: GCAGCAACTAGAGGAAAAAGACATGGACATTGCAGGGTTCACCCAGAAGGTTGTGTCTCTAGAGGCAGAGCTCCAGGACATTTCTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 90 bp AAGAAATGTCCTGGAGCTCTGCCTCTAGAGACACAACCTTCTGGGTaGACCCTGCAATGTCCATGTCTTTTTCCTCTAGTTGCTGCTTCA +
Preference number: 1 (lower is better)
Translates to: KKCPGALPLETQPSG*TLQCPCLFPLVAAS
Trigger: TGAAGCAGCAACTAGAGGAAAAAGACATGGACATTGCAGGGTTCACCCAGAAGGTTGTGTCTCTAGAGGCAGAGCTCCAGGACATTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 90 bp AAGAGGAGGAGGGGTGTCATTTGTTTCTTGCCTTTCTGCATGAGCTaGCTCTTAGCTGTCAATGAAGGAACAAAGCATGGAGTAGGGCAT +
Preference number: 1 (lower is better)
Translates to: KRRRGVICFLPFCMS*LLAVNEGTKHGVGH
Trigger: ATGCCCTACTCCATGCTTTGTTCCTTCATTGACAGCTAAGAGGCAGCTCATGCAGAAAGGCAAGAAACAAATGACACCCCTCCTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 90 bp CGGAAGGAGGAAGAGAAGAGAAGAGAAGAGAATCTCTGTAATTGGTaGGATTTAACAATCAGAGGGACCTCAACATTCCCTTGTGGAGGC +
Preference number: 1 (lower is better)
Translates to: RKEEEKRREENLCNW*DLTIRGTSTFPCGG
Trigger: GCCTCCACAAGGGAATGTTGAGGTCCCTCTGATTGTTAAATCTCACCAATTACAGAGATTCTCTTCTCTTCTCTTCTCTTCCTCCTTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 90 bp AGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATaGATACTAGCAGGTGCAGCATGTATTTTGTGTCTACCTTCCTCC +
Preference number: 1 (lower is better)
Translates to: RMDTMMCSSLPTLSL*ILAGAACILCLPSS
Trigger: GGAGGAAGGTAGACACAAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 90 bp AGGTTGATGTTGGAGTTTCCAGTTAACCAGAGGCTTGACTCAGTATaGGTGAACAGATTTGGGAATTCATCTAAAGGTGGCAGGGAGTTT +
Preference number: 1 (lower is better)
Translates to: RLMLEFPVNQRLDSV*VNRFGNSSKGGREF
Trigger: AAACTCCCTGCCACCTTTAGATGAATTCCCAAATCTGTTCACTCATACTGAGTCAAGCCTCTGGTTAACTGGAAACTCCAACATCAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 90 bp GATGTGTTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTaGAGCATGTATTTTGTGTCTACCTTCCTCCACTTTATGAAGGAA +
Preference number: 1 (lower is better)
Translates to: DVFLSTHSKLMHTSR*SMYFVSTFLHFMKE
Trigger: TTCCTTCATAAAGTGGAGGAAGGTAGACACAAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAACACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR GCA 90 bp TGGCCCGGCGCAGTGCCAGCTGCGAGCCGCCCTCCAGGCCCGCGATGGAGCCAGCCCTCGCCTCGTCTGTaGGGGCCAGCGAGCGGACCA +
Preference number: 2 (lower is better)
Translates to: WPGAVPAASRPPGPRWSQPSPRL*GPASGP
Trigger: TGGTCCGCTCGCTGGCCCGCACAGACGAGGCGAGGG...CTGGCTCCATCGCGGGCCTGGAGGGCGGCTCGCAGCTGGCACTGCGCCGGGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp TGGCCCGGCGCAGTGCCAGCTGCGAGCCGCCCTCCAGGCCCGCGATGGAGCCAGAGAGGGAGGTCAACGTaGTGGCTCCATGCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: WPGAVPAASRPPGPRWSQRGRST*WLHAVP
Trigger: TGGCACTGCATGGAGCCAGCACGTTGACCTCCCTCT...CTGGCTCCATCGCGGGCCTGGAGGGCGGCTCGCAGCTGGCACTGCGCCGGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp TGGCCCGGCGCAGTGCCAGCTGCGAGCCGCCCTCCAGGCCCGCGATGGAGCCAGACACACACACTTGTCTaGGTAGGCTTGCTCAACCCA +
Preference number: 2 (lower is better)
Translates to: WPGAVPAASRPPGPRWSQTHTLV*VGLLNP
Trigger: TGGGTTGAGCAAGCCTACGCAGACAAGTGTGTGTGT...CTGGCTCCATCGCGGGCCTGGAGGGCGGCTCGCAGCTGGCACTGCGCCGGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp CCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCTGTGGCTTCACTGGCTaGGCGCCGAGCCACACGCAG +
Preference number: 2 (lower is better)
Translates to: PSRYAAFWAHSWRANCLRCGFTG*APSHTQ
Trigger: CTGCGTGTGGCTCGGCGCCCAGCCAGTGAAGCCACA...GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 90 bp AGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTaGCGCCCAGCTTCAGCAGCTTCTTTGGTGGCTCCCGCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: SRYAAFWAHSWRANC*RPASAASLVAPAAP
Trigger: GGGGGCTGCGGGAGCCACCAAAGAAGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 90 bp CGGAAGGAGGTGGAGCGCTGCAGGGTGCCACCCTTGTGCTGGTGCTaGAAGATGGCTGAGGACAGCTCCTCCAGGCTGCAGCCCAGTAGG +
Preference number: 2 (lower is better)
Translates to: RKEVERCRVPPLCWC*KMAEDSSSRLQPSR
Trigger: CCTACTGGGCTGCAGCCTGGAGGAGCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
3UTR CAA 90 bp CGGCTCGCCTCGGCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTaGGTGTCCCGGAGCTGCCTCTGTAGCCGCTTGTTCTGTTCCTTC +
Preference number: 2 (lower is better)
Translates to: RLASASFLASSPISS*VSRSCLCSRLFCSF
Trigger: GAAGGAACAGAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCGAGGCGAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGCTGGCTCCATGCAGTaGCAGGCCACCTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: PRRESPHPTREGRHCFSSAGSMQ*QATCHC
Trigger: GCAGTGGCAGGTGGCCTGGCACTGCATGGAGCCAGC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGCTGGCTCCATGCAGTaGCAGGCCACCTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLAGSMQ*QATCHC
Trigger: GCAGTGGCAGGTGGCCTGGCACTGCATGGAGCCAGC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp CAGTTCGTGGTTGCGGACCTGCTGGCCCTCCAGGTGCAGCTTGGTGTCTTGCAGAGAGGCCGGCCGCCATaGCCTCAAGGCACTCCAGTG +
Preference number: 2 (lower is better)
Translates to: QFVVADLLALQVQLGVLQRGRPP*PQGTPV
Trigger: CACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCT...CTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCGGCGGGCAAACTGCTTaGGCCCAGCCACTGCAGGTT +
Preference number: 2 (lower is better)
Translates to: EKGEELAVEAGRHALKALGGQTA*AQPLQV
Trigger: AACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCC...GAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
3UTR-3UTR GCA 90 bp CACCAGGGAGACGAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCTCATGGCGGGCAAACTaGTTGCGCCCAGCCACTGCA +
Preference number: 2 (lower is better)
Translates to: HQGDEKGEELAVEAGRHASWRAN*LRPATA
Trigger: TGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGA...GGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
3UTR-3UTR CCA 90 bp CAGTTCGTGGTTGCGGACCTGCTGGCCCTCCAGGTGCAGCTTGGTGTCTTGCAGTGCCCCACCACTTCCTaGGAGAGGTGCCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: QFVVADLLALQVQLGVLQCPTTS*ERCPGS
Trigger: GCTGCCTGGGCACCTCTCCCAGGAAGTGGTGGGGCA...CTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTGCCCCACCACTTCCTaGGAGAGGTGCCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPCPTTS*ERCPGS
Trigger: GCTGCCTGGGCACCTCTCCCAGGAAGTGGTGGGGCA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp CCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCAACTGCAGGTTACCTTTaGTGGCTCCCGCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: PAAMPSRHSSALSFGPVPTAGYL*WLPQPP
Trigger: TGGGGGCTGCGGGAGCCACCAAAGGTAACCTGCAGT...TGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588791.1
3UTR-3UTR TCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCACACCTTGTTCCCGCTaGTGCCCGCGATGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPTPCSR*CPRWWP
Trigger: TGGCCACCATCGCGGGCATCAGCGGGAACAAGGTGT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp AACTCCTGCTGGAGCCGTTTCTTGGTGAAGTCCACCTCCCGCACAGCCCGCTCAGAGCGGACCAGGGACTaGTGGGAGGCCTGGTCCACA +
Preference number: 2 (lower is better)
Translates to: NSCWSRFLVKSTSRTARSERTRD*WEAWST
Trigger: TGTGGACCAGGCCTCCCATCAGTCCCTGGTCCGCTC...TGAGCGGGCTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCAGGAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp GCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCGTTGCTGCTTCAGGCTaGAAGCCTCAGCGAGGAGCA +
Preference number: 2 (lower is better)
Translates to: ASFLASSPISSLVSRSCLVAASG*KPQRGA
Trigger: TGCTCCTCGCTGAGGCTTTCAGCCTGAAGCAGCAAC...GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCGTTCATCGGGGGAGATaGCCAGCACCTTCATGGCCG +
Preference number: 2 (lower is better)
Translates to: EKGEELAVEAGRHALKALVHRGR*PAPSWP
Trigger: CGGCCATGAAGGTGCTGGGCATCTCCCCCGATGAAC...GAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCCCGTTGATCTCCGCTaGCCGGATGAGACGGGCCTC +
Preference number: 2 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRPVDLR*PDETGL
Trigger: GAGGCCCGTCTCATCCGGGCAGCGGAGATCAACGGG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTGCCCCACCACTTCCTaGGAGAGGTGCCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTCPTTS*ERCPGS
Trigger: GCTGCCTGGGCACCTCTCCCAGGAAGTGGTGGGGCA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp AGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCTCAGGGTGTTTCCCATaGAGATCAGCAGTCGGGTGG +
Preference number: 2 (lower is better)
Translates to: RPAAMPSRHSSALSFGPVSGCFP*RSAVGW
Trigger: CCACCCGACTGCTGATCTGCATGGGAAACACCCTGA...GACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp CCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCAGCATCGCCCTGTATaGGGTCTGGGCCACTGCATA +
Preference number: 2 (lower is better)
Translates to: PSRYAAFWAHSWRANCLRQHRPV*GLGHCI
Trigger: TATGCAGTGGCCCAGACCGCATACAGGGCGATGCTG...GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCCTCACTATCTGCCTaGAGGTCCCCGAGCCGCCGT +
Preference number: 2 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRSSLSA*RSPSRR
Trigger: ACGGCGGCTCGGGGACCTGCAGGCAGATAGTGAGGA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCCTCCATTGCTTTCCGTaGTTTCACGGCTGCCGCACA +
Preference number: 2 (lower is better)
Translates to: ASFLASSPISSLVSRSCLLHCFP*FHGCRT
Trigger: TGTGCGGCAGCCGTGAAAGCACGGAAAGCAATGGAG...GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCTCCCGGTTCTCGGCTaGAATGCGCTGATCCCGCTC +
Preference number: 2 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRLPVLG*NALIPL
Trigger: GAGCGGGATCAGCGCATTGCAGCCGAGAACCGGGAG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTGCCCCACCACTTCCTaGGAGAGGTGCCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: KKVRVFPMQISSRVGETGCPTTS*ERCPGS
Trigger: GCTGCCTGGGCACCTCTCCCAGGAAGTGGTGGGGCA...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGGGAGGTCAACGTGCTaGCTCCATGCAGTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTGRSTC*LHAVPG
Trigger: GCCTGGCACTGCATGGAGCCAGCACGTTGACCTCCC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCAGGATGGCCCCATCGTaGTCCAGCTTCACACGCACC +
Preference number: 2 (lower is better)
Translates to: PRRESPHPTREGRHCFSSRMAPS*SSFTRT
Trigger: GGTGCGTGTGAAGCTGGACCACGATGGGGCCATCCT...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp CCAGGACTTGACCCCGTCAACACGGTCCTCCAGCTCCGAGTCCACATCAGAGTCCGCCCATCTCCTCCTTaGTGTCCCGGAGCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: PGLDPVNTVLQLRVHIRVRPSPP*CPGAAS
Trigger: AGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCG...GACTCTGATGTGGACTCGGAGCTGGAGGACCGTGTTGACGGGGTCAAGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 90 bp TTCGTGGTTGCGGACCTGCTGGCCCTCCAGGTGCAGCTTGGTGTCTaGCAGCTCAGCCGTCAGTCGCTGGCACTTCTTCTTGAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: FVVADLLALQVQLGV*QLSRQSLALLLELL
Trigger: CAGCAGCTCAAGAAGAAGTGCCAGCGACTGACGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp AGGGTGGCGAGCTTGCCCTCCAGCTCCCGCTTCTCTCGCAGAACCTTCTGCTTGGTGCTTGAAGATGGCTaGGGACAGCTCCTCCAGGCT +
Preference number: 2 (lower is better)
Translates to: RVASLPSSSRFSRRTFCLVLEDG*GQLLQA
Trigger: AGCCTGGAGGAGCTGTCCTCAGCCATCTTCAAGCAC...CAAGCAGAAGGTTCTGCGAGAGAAGCGGGAGCTGGAGGGCAAGCTCGCCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTAACGTGCTGGCTCCATaGAGTGCCAGGCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTNVLAP*SARPPA
Trigger: GGCAGGTGGCCTGGCACTGCATGGAGCCAGCACGTT...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp AACAGGGTTAGGTTCCTGCTGGTTTGTTCATCCCGCTGCTCCTCCAGCCGTGCCAACGTGCTGGCTCCATaGAGTGCCAGGCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: NRVRFLLVCSSRCSSSRANVLAP*SARPPA
Trigger: GGCAGGTGGCCTGGCACTGCATGGAGCCAGCACGTT...GGCACGGCTGGAGGAGCAGCGGGATGAACAAACCAGCAGGAACCTAACCCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAGAGGGAGGTCAACGTaGTGGCTCCATGCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLRGRST*WLHAVP
Trigger: TGGCACTGCATGGAGCCAGCACGTTGACCTCCCTCT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCGAGAGGGAAGGCACTaGTTCTCCTCCCCCAATCCT +
Preference number: 2 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLREGRH*FSSPNP
Trigger: AGGATTGGGGGAGGAGAAGCAGTGCCTTCCCTCTCG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp CCAGGACTTGACCCCGTCAACACGGTCCTCCAGCTCCGAGTCCACATCAGAGTCCGCTGGCGCAAGGTGTaGAGGACGCTGGACTCATTG +
Preference number: 2 (lower is better)
Translates to: PGLDPVNTVLQLRVHIRVRWRKV*RTLDSL
Trigger: CAATGAGTCCAGCGTCCTGCACACCTTGCGCCAGCG...GACTCTGATGTGGACTCGGAGCTGGAGGACCGTGTTGACGGGGTCAAGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp CCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCAGGTACTGCACCAGATaGTGGCAGCTGGTGGTCTTG +
Preference number: 2 (lower is better)
Translates to: PSRYAAFWAHSWRANCLRRYCTR*WQLVVL
Trigger: CAAGACCACCAGCTGCCAGCATCTGGTGCAGTACCT...GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGACAGCTCCTCCAGGCTaGAGCCCAGTAGGTACGCAG +
Preference number: 2 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRTAPPG*SPVGTQ
Trigger: CTGCGTACCTACTGGGCTGCAGCCTGGAGGAGCTGT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GATCTTTCTCTTCTTGAAGTGCTGGCGGGCCAGGTAGCCCCTGCAGGCTGCTTGAAGGAGGTGGAGCGCTaGAGGGTGCCACCCTTGTGC +
Preference number: 2 (lower is better)
Translates to: DLSLLEVLAGQVAPAGCLKEVER*RVPPLC
Trigger: GCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTT...CAAGCAGCCTGCAGGGGCTACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCCCCAATCCTCCCCATaGACCCAGCAACCTAGAGTG +
Preference number: 2 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPPQSSP*TQQPRV
Trigger: CACTCTAGGTTGCTGGGTCCATGGGGAGGATTGGGG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCGAGGGAGGCAGTGCTTaGATCAGCCCTGAACTGCTG +
Preference number: 2 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPEGGSA*ISPELL
Trigger: CAGCAGTTCAGGGCTGATCCAAGCACTGCCTCCCTC...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp CCAGGACTTGACCCCGTCAACACGGTCCTCCAGCTCCGAGTCCACATCAGAGTCATGGTCCAGACCACCTaGACAGAGCAGGAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: PGLDPVNTVLQLRVHIRVMVQTT*TEQEGG
Trigger: GCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCAT...GACTCTGATGTGGACTCGGAGCTGGAGGACCGTGTTGACGGGGTCAAGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp GGGGCCAGGACATCAAAGCGGCGGCGGAACTCGGAAAACACCATGTGGTCAGGGCATCCACATCCAGGATaGCCCCATCGTGGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: GARTSKRRRNSENTMWSGHPHPG*PHRGPA
Trigger: AGCTGGACCACGATGGGGCCATCCTGGATGTGGATG...CCCTGACCACATGGTGTTTTCCGAGTTCCGCCGCCGCTTTGATGTCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCATTG +
Preference number: 2 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPSRERI*EKRVAL
Trigger: CAATGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 90 bp TCAGAATCCTGCCTCTGCCCACCACCCCCAGGACCAATCCAGACTTaGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: SESCLCPPPPGPIQT*PEPEGTGRKTGAAR
Trigger: CCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAGTCTGGATTGGTCCTGGGGGTGGTGGGCAGAGGCAGGATTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CAA 90 bp TGCTCCACCTCCAGCTTGTCCTCAAACTCCTGCTGGAGCCGTTTCTaGGTGAAGTCCACCTCCCGCACAGCCCGCTCATACTTCAGCCGC +
Preference number: 2 (lower is better)
Translates to: CSTSSLSSNSCWSRF*VKSTSRTARSYFSR
Trigger: GCGGCTGAAGTATGAGCGGGCTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCAGGAGTTTGAGGACAAGCTGGAGGTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 90 bp TTCTTCAGGTGGTCCAGCATGAGCTGGGCATCTGCCAGCAGGGCCTaGGTGCGCTTCAGGTCCTTCCGCAGCCGCTTCTCTGACTCAAAG +
Preference number: 2 (lower is better)
Translates to: FFRWSSMSWASASRA*VRFRSFRSRFSDSK
Trigger: CTTTGAGTCAGAGAAGCGGCTGCGGAAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCACCTGAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp CCAGGACTTGACCCCGTCAACACGGTCCTCCAGCTCCGAGTCCACATCAGAGTCCCTCCAGCTGGTTCTTaGGCTGGGCAATCTCTCGCT +
Preference number: 2 (lower is better)
Translates to: PGLDPVNTVLQLRVHIRVPPAGS*AGQSLA
Trigger: AGCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGG...GACTCTGATGTGGACTCGGAGCTGGAGGACCGTGTTGACGGGGTCAAGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCGCTGGCTCCATGCAGTaGCAGGCCACCTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSAGSMQ*QATCHC
Trigger: GCAGTGGCAGGTGGCCTGGCACTGCATGGAGCCAGC...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGAACGTGCTGGCTCCATaGAGTGCCAGGCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWNVLAP*SARPPA
Trigger: GGCAGGTGGCCTGGCACTGCATGGAGCCAGCACGTT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCGAGAGGGAAGGCACTaGTTCTCCTCCCCCAATCCT +
Preference number: 2 (lower is better)
Translates to: GDDIPESFLGAPATTTAPREGRH*FSSPNP
Trigger: AGGATTGGGGGAGGAGAAGCAGTGCCTTCCCTCTCG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCATGGTGGCCAGGTACTaGACCAGATGCTGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: GDDIPESFLGAPATTTAPMVARY*TRCWQL
Trigger: CAGCTGCCAGCATCTGGTGCAGTACCTGGCCACCAT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCACTCCCCTGGGCTATaGGTTAGTCTCCGTCAGCTT +
Preference number: 2 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPHSPGL*VSLRQL
Trigger: AAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTGCCCCACCACTTCCTaGGAGAGGTGCCCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPCPTTS*ERCPGS
Trigger: GCTGCCTGGGCACCTCTCCCAGGAAGTGGTGGGGCA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp ATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCACACTAGATCAGCAGTCGGGTaGGGGAGACCGGTGCCCCAC +
Preference number: 2 (lower is better)
Translates to: IVGQWRGQSLFETDPLHTRSAVG*GRPVPH
Trigger: GTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCT...AGTGTGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTCCCCAATCCTCCCCATaGACCCAGCAACCTAGAGTG +
Preference number: 2 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTPQSSP*TQQPRV
Trigger: CACTCTAGGTTGCTGGGTCCATGGGGAGGATTGGGG...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGAGGCTGAGGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 2 (lower is better)
Translates to: KKVRVFPMQISSRVGETGEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCCTCAGCCTC...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp GAGCCAGGTCCCGGGAAGCCTGAGCCACGGCAGCCTTGTGCTTCTTCATCAATTCTTCAGCAGCTTCTTTaGTGGCTCCCGCAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: EPGPGKPEPRQPCASSSILQQLL*WLPQPP
Trigger: TGGGGGCTGCGGGAGCCACCAAAGAAGCTGCTGAAG...AATTGATGAAGAAGCACAAGGCTGCCGTGGCTCAGGCTTCCCGGGACCTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp CTCCGCGTCCAGCAGCTGGGAGGCGGACTCTCCTGTGTTACGCTCATCTGTCAGTGGCTGGGTTCTGCTTaGTGTAGTTCAGCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: LRVQQLGGGLSCVTLICQWLGSA*CSSASQ
Trigger: CTGGCTGGCTGAACTACACCAAGCAGAACCCAGCCA...CTGACAGATGAGCGTAACACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 90 bp AGCCGCCGTTCCAGCTGCCTCTTGTTCTGCTGCTCCACCTCCAGCTaGTCCTCAAACTCCTGCTGGAGCCGTTTCTTGGTGAAGTCCACC +
Preference number: 2 (lower is better)
Translates to: SRRSSCLLFCCSTSS*SSNSCWSRFLVKST
Trigger: GGTGGACTTCACCAAGAAACGGCTCCAGCAGGAGTTTGAGGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGAACGGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp CCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCTTCCCTCTCAAGTTaGGTTTATGGTCCAGACCAC +
Preference number: 2 (lower is better)
Translates to: PSRYAAFWAHSWRANCLRPSLSS*VYGPDH
Trigger: GTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGG...GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCCACCCTTGCTAACCTaGATCACAGTCCCTAGGCTC +
Preference number: 2 (lower is better)
Translates to: GDDIPESFLGAPATTTAPPPLLT*ITVPRL
Trigger: GAGCCTAGGGACTGTGATTCAGGTTAGCAAGGGTGG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR TCA 90 bp AACTCCTGCTGGAGCCGTTTCTTGGTGAAGTCCACCTCCCGCACAGCCCGCTCACCTTGTGCTGGTGCTTaGAGATGGCTGAGGACAGCT +
Preference number: 2 (lower is better)
Translates to: NSCWSRFLVKSTSRTARSPCAGA*RWLRTA
Trigger: AGCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGG...TGAGCGGGCTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCAGGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCAGGGTGTTTCCCATaGAGATCAGCAGTCGGGTGG +
Preference number: 2 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRSGCFP*RSAVGW
Trigger: CCACCCGACTGCTGATCTGCATGGGAAACACCCTGA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCGAGAGGGAAGGCACTaGTTCTCCTCCCCCAATCCT +
Preference number: 2 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTREGRH*FSSPNP
Trigger: AGGATTGGGGGAGGAGAAGCAGTGCCTTCCCTCTCG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCACTAAACTGCTGAGCTaGCTTCTGCTTTTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: ASFLASSPISSLVSRSCLTKLLS*LLLFLR
Trigger: CCTGAGGAAAAGCAGAAGGCAGCTCAGCAGTTTAGT...GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGGGAGGTCAACGTGCTaGCTCCATGCAGTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPGRSTC*LHAVPG
Trigger: GCCTGGCACTGCATGGAGCCAGCACGTTGACCTCCC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCGGGAGGTCAACGTGCTaGCTCCATGCAGTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSGRSTC*LHAVPG
Trigger: GCCTGGCACTGCATGGAGCCAGCACGTTGACCTCCC...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCCCCAATCCTCCCCATaGACCCAGCAACCTAGAGTG +
Preference number: 2 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTPQSSP*TQQPRV
Trigger: CACTCTAGGTTGCTGGGTCCATGGGGAGGATTGGGG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACCCCCAATCCTCCCCATaGACCCAGCAACCTAGAGTG +
Preference number: 2 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNPQSSP*TQQPRV
Trigger: CACTCTAGGTTGCTGGGTCCATGGGGAGGATTGGGG...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTCCCGAGTCGTTCTTaGGAGCCCCAGCTACCACTA +
Preference number: 2 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRFPSRS*EPQLPL
Trigger: TAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp CCGTCGGGGGTTCCAAGTCGTCAAACGCCAGCTCGATGTTCTCCTCCTTGTATCGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: PSGVPSRQTPARCSPPCIATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...GATACAAGGAGGAGAACATCGAGCTGGCGTTTGACGACTTGGAACCCCCGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp GTCCAGCATGAGCTGGGCATCTGCCAGCAGGGCCTTGGTGCGCTTCAGGTCCTTTTGCTCCGCAGCTGCTaGATCTCCTCGTCTTTGTTC +
Preference number: 2 (lower is better)
Translates to: VQHELGICQQGLGALQVLLLRSC*ISSSLF
Trigger: GAACAAAGACGAGGAGATCCAGCAGCTGCGGAGCAA...AAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAGATGCCCAGCTCATGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 90 bp TGCTCTCTGAAGGGTGAAGATGGAGATGACATTCCCGAGTCGTTCTaGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: CSLKGEDGDDIPESF*GAPATTTAPSHSQG
Trigger: TCCCTGAGAGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCCATCTTCACCCTTCAGAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR CAA 90 bp CTCTCCATCTCATCCTCAATGGCAGCCTGCAGGTCCCCGATGCGCTaGAATGCCAACTTTAGGTCAGCCTGCAGGCTCTGGTTAGCAGCC +
Preference number: 2 (lower is better)
Translates to: LSISSSMAACRSPMR*NANFRSACRLWLAA
Trigger: GGCTGCTAACCAGAGCCTGCAGGCTGACCTAAAGTTGGCATTCAAGCGCATCGGGGACCTGCAGGCTGCCATTGAGGATGAGATGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTGCTTGGATCAGCCCTaGACTGCTGTAGTTGGAATG +
Preference number: 2 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPCLDQP*TAVVGM
Trigger: CATTCCAACTACAGCAGTTCAGGGCTGATCCAAGCA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTCAGGGTGTTTCCCATaGAGATCAGCAGTCGGGTGG +
Preference number: 2 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTSGCFP*RSAVGW
Trigger: CCACCCGACTGCTGATCTGCATGGGAAACACCCTGA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGCTGGCTCCATGCAGTaGCAGGCCACCTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: GTALGLPSLVEFSGITFLAGSMQ*QATCHC
Trigger: GCAGTGGCAGGTGGCCTGGCACTGCATGGAGCCAGC...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp CCGTCGGGGGTTCCAAGTCGTCAAACGCCAGCTCGATGTTCTCCTCCTTGTATCCGAGAGGGAAGGCACTaGTTCTCCTCCCCCAATCCT +
Preference number: 2 (lower is better)
Translates to: PSGVPSRQTPARCSPPCIREGRH*FSSPNP
Trigger: AGGATTGGGGGAGGAGAAGCAGTGCCTTCCCTCTCG...GATACAAGGAGGAGAACATCGAGCTGGCGTTTGACGACTTGGAACCCCCGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCGAGAGGGAAGGCACTaGTTCTCCTCCCCCAATCCT +
Preference number: 2 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWREGRH*FSSPNP
Trigger: AGGATTGGGGGAGGAGAAGCAGTGCCTTCCCTCTCG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACACCAGCGTCTCCAGCTaGACAGAGAAAGGACTGCTC +
Preference number: 2 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNTSVSS*TEKGLL
Trigger: GAGCAGTCCTTTCTCTGTGCAGCTGGAGACGCTGGT...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCGACCAATCCAGACTTTaGCTGAGCCTGAAGGAACAG +
Preference number: 2 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPDQSRL*LSLKEQ
Trigger: CTGTTCCTTCAGGCTCAGGCAAAGTCTGGATTGGTC...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR GCA 90 bp GCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCATTCCAGGCCTCTTCTaGTGCAATCTGTTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: ASFLASSPISSLVSRSCLIPGLF*CNLFFC
Trigger: ACAGAAGAACAGATTGCAGCAGAAGAGGCCTGGAAT...GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTGTGGTTTGCTGCTGTaGAGAAGGGGGCTTTGGCCT +
Preference number: 2 (lower is better)
Translates to: KKVRVFPMQISSRVGETGCGLLL*RRGLWP
Trigger: AGGCCAAAGCCCCCTTCTGCACAGCAGCAAACCACA...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCCTTCTGGGTGAACCCTaGAATGTCCATGTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: ASFLASSPISSLVSRSCLLLGEP*NVHVFF
Trigger: GAAAAAGACATGGACATTGCAGGGTTCACCCAGAAG...GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAAGATCAGCAGTCGGGTaGGGGAGACCGGTGCCCCAC +
Preference number: 2 (lower is better)
Translates to: GTALGLPSLVEFSGITFLRSAVG*GRPVPH
Trigger: GTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCT...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCCCCAATCCTCCCCATaGACCCAGCAACCTAGAGTG +
Preference number: 2 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWPQSSP*TQQPRV
Trigger: CACTCTAGGTTGCTGGGTCCATGGGGAGGATTGGGG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTTCCCGAGTCGTTCTTaGGAGCCCCAGCTACCACTA +
Preference number: 2 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNFPSRS*EPQLPL
Trigger: TAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCATTCTTAAGAACCTaGACCCGGCTCTCCTCACCA +
Preference number: 2 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSFLRT*TRLSSP
Trigger: TGGTGAGGAGAGCCGGGTCCAGGTTCTTAAGAATGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCGACCTCCAGACCACATaGTGTTGTGTCTGGGATAAG +
Preference number: 2 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPDLQTT*CCVWDK
Trigger: CTTATCCCAGACACAACACCATGTGGTCTGGAGGTC...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCAAGAACCAGCAGGCTaGGGCCAGCATACGTGTGCA +
Preference number: 2 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWQEPAG*GQHTCA
Trigger: TGCACACGTATGCTGGCCCCAGCCTGCTGGTTCTTG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp GATCTTTCTCTTCTTGAAGTGCTGGCGGGCCAGGTAGCCCCTGCAGGCTGCTTGTTGGTGCCATGGCTGTaGCCCAGGAGAAAGTGGTGT +
Preference number: 2 (lower is better)
Translates to: DLSLLEVLAGQVAPAGCLLVPWL*PRRKWC
Trigger: ACACCACTTTCTCCTGGGCCACAGCCATGGCACCAA...CAAGCAGCCTGCAGGGGCTACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTGGGAAGAAATGTCCTaGAGCTCTGCCTCTAGAGAC +
Preference number: 2 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPWEEMS*SSASRD
Trigger: GTCTCTAGAGGCAGAGCTCCAGGACATTTCTTCCCA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 90 bp GCTTGGTCAAAGTCCAGGGAGAGGATCTGGGAGAAGCGGGTGGCATaGCCATTAATGATGGTGGGGCTGTTCCCAAAGGCTTCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: AWSKSRERIWEKRVA*PLMMVGLFPKASRR
Trigger: CCTCCTGGAAGCCTTTGGGAACAGCCCCACCATCATTAATGGCAATGCCACCCGCTTCTCCCAGATCCTCTCCCTGGACTTTGACCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTTGCACATAACACGCTaGGACAAAGAGGGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTLHITR*DKEGGV
Trigger: CACCCCACCCTCTTTGTCTCAGCGTGTTATGTGCAA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGAGTTGACTGGCCAGTaGGAAGCCGTCCCTATGGAC +
Preference number: 2 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPELTGQ*EAVPMD
Trigger: GTCCATAGGGACGGCTTCTCACTGGCCAGTCAACTC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCACACAACCTTCTGGGTaGACCCTGCAATGTCCATGT +
Preference number: 2 (lower is better)
Translates to: GDDIPESFLGAPATTTAPTQPSG*TLQCPC
Trigger: ACATGGACATTGCAGGGTTCACCCAGAAGGTTGTGT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAAACGTGCTGGCTCCATaGAGTGCCAGGCCACCTGCC +
Preference number: 2 (lower is better)
Translates to: GTALGLPSLVEFSGITFLNVLAP*SARPPA
Trigger: GGCAGGTGGCCTGGCACTGCATGGAGCCAGCACGTT...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTCCCACTCTCAGGGATaGAGCTGTGATGGAGAGGTT +
Preference number: 2 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTSHSQG*SCDGEV
Trigger: AACCTCTCCATCACAGCTGCATCCCTGAGAGTGGGA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTCCCACTCTCAGGGATaGAGCTGTGATGGAGAGGTT +
Preference number: 2 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSHSQG*SCDGEV
Trigger: AACCTCTCCATCACAGCTGCATCCCTGAGAGTGGGA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCGGATCAGCCCTGAACTaGTGTAGTTGGAATGGGTTT +
Preference number: 2 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPGSALN*CSWNGF
Trigger: AAACCCATTCCAACTACAGCAGTTCAGGGCTGATCC...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCGGGAGGTAGAGGTTaGAGTGAGTTGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRSGGRG*SELRSC
Trigger: GCATGATCTCAACTCACTGCAACCTCTACCTCCCGA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGCAATCCCGGGGATCTaGAGTTATAGAGGAGGATCT +
Preference number: 2 (lower is better)
Translates to: GDDIPESFLGAPATTTAPAIPGI*SYRGGS
Trigger: AGATCCTCCTCTATAACTGCAGATCCCCGGGATTGC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR GCA 90 bp CCAGGACTTGACCCCGTCAACACGGTCCTCCAGCTCCGAGTCCACATCAGAGTCGCCACGGCAGCCTTGTaGTTCTTCATCAATTCGTTC +
Preference number: 2 (lower is better)
Translates to: PGLDPVNTVLQLRVHIRVATAAL*FFINSF
Trigger: GAACGAATTGATGAAGAAGCACAAGGCTGCCGTGGC...GACTCTGATGTGGACTCGGAGCTGGAGGACCGTGTTGACGGGGTCAAGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp CCAGGACTTGACCCCGTCAACACGGTCCTCCAGCTCCGAGTCCACATCAGAGTCTCATTCTTAAGAACCTaGACCCGGCTCTCCTCACCA +
Preference number: 2 (lower is better)
Translates to: PGLDPVNTVLQLRVHIRVSFLRT*TRLSSP
Trigger: TGGTGAGGAGAGCCGGGTCCAGGTTCTTAAGAATGA...GACTCTGATGTGGACTCGGAGCTGGAGGACCGTGTTGACGGGGTCAAGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp GGGGCCAGGACATCAAAGCGGCGGCGGAACTCGGAAAACACCATGTGGTCAGGGCTCAAGTTGAGTTTATaGTCCAGACCACCTGGACAG +
Preference number: 2 (lower is better)
Translates to: GARTSKRRRNSENTMWSGLKLSL*SRPPGQ
Trigger: CTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAG...CCCTGACCACATGGTGTTTTCCGAGTTCCGCCGCCGCTTTGATGTCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCTCAGGCTTGGCCAGTaGCACAATCCCAAACACATT +
Preference number: 2 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRLRLGQ*HNPKHI
Trigger: AATGTGTTTGGGATTGTGCCACTGGCCAAGCCTGAG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGAGTAGCTGGTGGGGCTaGAACTCTTTAAGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRSSWWG*NSLSCH
Trigger: ATGGCAGCTTAAAGAGTTCCAGCCCCACCAGCTACT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGCATGGAGTAGGGCATaGAGACAGGGACCGAGCAGG +
Preference number: 2 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFAWSRA*RQGPSR
Trigger: CCTGCTCGGTCCCTGTCTTCATGCCCTACTCCATGC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR TCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCCCGCCGACAACCCTTaGACATGTGCATCACCTTCT +
Preference number: 2 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVPADNP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGTTGTCGGCGGG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCAGGGTGTTTCCCATaGAGATCAGCAGTCGGGTGG +
Preference number: 2 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSGCFP*RSAVGW
Trigger: CCACCCGACTGCTGATCTGCATGGGAAACACCCTGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGTCCCACTCTCAGGGATaGAGCTGTGATGGAGAGGTT +
Preference number: 2 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWSHSQG*SCDGEV
Trigger: AACCTCTCCATCACAGCTGCATCCCTGAGAGTGGGA...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTACCAGCGTCTCCAGCTaGACAGAGAAAGGACTGCTC +
Preference number: 2 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPTSVSS*TEKGLL
Trigger: GAGCAGTCCTTTCTCTGTGCAGCTGGAGACGCTGGT...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTACACACACACTTGTCTaGGTAGGCTTGCTCAACCCA +
Preference number: 2 (lower is better)
Translates to: KKVRVFPMQISSRVGETGTHTLV*VGLLNP
Trigger: TGGGTTGAGCAAGCCTACGCAGACAAGTGTGTGTGT...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCAGTGAGTTGAGATCATaGCACTGCATTCCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: GDDIPESFLGAPATTTAPSELRS*HCIPAW
Trigger: CCAAGCTGGAATGCAGTGGCATGATCTCAACTCACT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTTCCCGAGTCGTTCTTaGGAGCCCCAGCTACCACTA +
Preference number: 2 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPFPSRS*EPQLPL
Trigger: TAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTGGGGGCAGGGAGGTTaGAAGAATGACACGGGCTCA +
Preference number: 2 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWWGQGG*KNDTGS
Trigger: TGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR CAA 90 bp GCGAGCTTGCCCTCCAGCTCCCGCTTCTCTCGCAGAACCTTCTGCTaGTCCTCATACTCTTCCTCTAGCTGCACCTCCATCTGTTTTAAC +
Preference number: 2 (lower is better)
Translates to: ASLPSSSRFSRRTFC*SSYSSSSCTSICFN
Trigger: GTTAAAACAGATGGAGGTGCAGCTAGAGGAAGAGTATGAGGACAAGCAGAAGGTTCTGCGAGAGAAGCGGGAGCTGGAGGGCAAGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTCAGGGTGTTTCCCATaGAGATCAGCAGTCGGGTGG +
Preference number: 2 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWSGCFP*RSAVGW
Trigger: CCACCCGACTGCTGATCTGCATGGGAAACACCCTGA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGACCAGCGTCTCCAGCTaGACAGAGAAAGGACTGCTC +
Preference number: 2 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWTSVSS*TEKGLL
Trigger: GAGCAGTCCTTTCTCTGTGCAGCTGGAGACGCTGGT...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGGATCAGCCCTGAACTaGTGTAGTTGGAATGGGTTT +
Preference number: 2 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTGSALN*CSWNGF
Trigger: AAACCCATTCCAACTACAGCAGTTCAGGGCTGATCC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GCCAGTCACATTGTACTCTACCCAGTTGGTGCCATGGCTGTGGCCCAGGAGAAATATCTTTCCAACTCCTaGACGAAGGTGCGCTCGTGG +
Preference number: 2 (lower is better)
Translates to: ASHIVLYPVGAMAVAQEKYLSNS*TKVRSW
Trigger: CCACGAGCGCACCTTCGTGCAGGAGTTGGAAAGATA...TTTCTCCTGGGCCACAGCCATGGCACCAACTGGGTAGAGTACAATGTGACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp GCCAGTCACATTGTACTCTACCCAGTTGGTGCCATGGCTGTGGCCCAGGAGAAACCCACCTCTTCCACGTaGAGACATCAGACACCCATA +
Preference number: 2 (lower is better)
Translates to: ASHIVLYPVGAMAVAQEKPTSST*RHQTPI
Trigger: TATGGGTGTCTGATGTCTCCACGTGGAAGAGGTGGG...TTTCTCCTGGGCCACAGCCATGGCACCAACTGGGTAGAGTACAATGTGACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCAATGGTCCAGACCACCTaGACAGAGCAGGAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSMVQTT*TEQEGG
Trigger: GCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCAT...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGAACAGGCAGGAAAACTaGCGCAGCCAGGAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLNRQEN*RSQEEK
Trigger: CTTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTT...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGGGAGTATCGCGGTCTaGAGGTGTTGTCGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFGSIAV*RCCREG
Trigger: ACCCTCTCGACAACACCTCCAGACCGCGATACTCCC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 90 bp ACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATaGCCCTGTGGGCCCGAGCTAGTTCTGCCAAGTTTTGATCAAAAA +
Preference number: 2 (lower is better)
Translates to: TGTEQGRDSTPNLFT*PCGPELVLPSFDQK
Trigger: TTTTTGATCAAAACTTGGCAGAACTAGCTCGGGCCCACAGGGCAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CAA 90 bp ATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGGCTTaGAGCCTGGCAAAGGGCCAGATTTGCCTTCTGCAACATCTTAGG +
Preference number: 2 (lower is better)
Translates to: IPGICSYRGGSSRLA*SLAKGQICLLQHLR
Trigger: CCTAAGATGTTGCAGAAGGCAAATCTGGCCCTTTGCCAGGCTCAAAGCCAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CAA 90 bp TTCTGCTTTTCCTCAGGCTTGGCCAGTGGCACAATCCCAAACACATaGTTCTCTGCCAAGTGGTTGAGGTGGAGCTCTGTCCTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: FCFSSGLASGTIPNT*FSAKWLRWSSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTCAACCACTTGGCAGAGAACAATGTGTTTGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGAAAGGACTGCTCTCTaGAGGGTGAAGATGGAGATG +
Preference number: 2 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLERTAL*RVKMEM
Trigger: CATCTCCATCTTCACCCTTCAGAGAGCAGTCCTTTC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCTGCTTGGATCAGCCCTaGACTGCTGTAGTTGGAATG +
Preference number: 2 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSCLDQP*TAVVGM
Trigger: CATTCCAACTACAGCAGTTCAGGGCTGATCCAAGCA...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCCTTCCCTCTCAAGTTaGGTTTATGGTCCAGACCAC +
Preference number: 2 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVPSLSS*VYGPDH
Trigger: GTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGCCCAGGAGGATGATTaGCTGATCCTGACGGCTCAT +
Preference number: 2 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFAQEDD*LILTAH
Trigger: ATGAGCCGTCAGGATCAGTCAATCATCCTCCTGGGC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTACACACACACTTGTCTaGGTAGGCTTGCTCAACCCA +
Preference number: 2 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLTHTLV*VGLLNP
Trigger: TGGGTTGAGCAAGCCTACGCAGACAAGTGTGTGTGT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCATTCTTAAGAACCTaGACCCGGCTCTCCTCACCA +
Preference number: 2 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSFLRT*TRLSSP
Trigger: TGGTGAGGAGAGCCGGGTCCAGGTTCTTAAGAATGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp TTCTATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCAATAACCTTTTTAGGGTaGGGGCTGGGACCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: FYRGAMEGAVSVRDRSTSITFLG*GLGPPD
Trigger: GTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTAT...TGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGATAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACAGCAGCTTCTTTGGTaGCTCCCGCAGCCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKQQLLW*LPQPPG
Trigger: ACCTGGGGGCTGCGGGAGCCACCAAAGAAGCTGCTG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAAGGTACGCAGCCTTCTaGGCCCACTCATGGCGGGCA +
Preference number: 2 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKRYAAF*AHSWRA
Trigger: TGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCT...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTCTCCAGACGCAGCTTaGCCTGTTCCAGCATCTGGA +
Preference number: 2 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSPDAA*PVPASG
Trigger: TCCAGATGCTGGAACAGGCCAAGCTGCGTCTGGAGA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCCTGCTTCTCTTTGTTaGCTTCTTCTAGCTGAGCTT +
Preference number: 2 (lower is better)
Translates to: KKVRVFPMQISSRVGETGPASLC*LLLAEL
Trigger: AAGCTCAGCTAGAAGAAGCCAACAAAGAGAAGCAGG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 90 bp GTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCAAGTaGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: VFLITSPQPQAFPLK*SLWSRPPGQSRREA
Trigger: TGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTAAGAGTCTGGCATTTTaGGACAGAGGAGCAAAAAGT +
Preference number: 2 (lower is better)
Translates to: KKVRVFPMQISSRVGETGKSLAF*DRGAKS
Trigger: ACTTTTTGCTCCTCTGTCTCAAAATGCCAGACTCTT...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTTGCACATAACACGCTaGGACAAAGAGGGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFLHITR*DKEGGV
Trigger: CACCCCACCCTCTTTGTCTCAGCGTGTTATGTGCAA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGGGAGGATGGATACTATaGTGTGTTCCTCTCTACCCA +
Preference number: 2 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLGGWIL*CVPLYP
Trigger: TGGGTAGAGAGGAACACATCATAGTATCCATCCTCC...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCCCACCTCTTCCACGTaGAGACATCAGACACCCATA +
Preference number: 2 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKPTSST*RHQTPI
Trigger: TATGGGTGTCTGATGTCTCCACGTGGAAGAGGTGGG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR CAA 90 bp TCAGCTACAGGCAGGAAGCAGTGCACAAAATGCAGCTTTGACTTCTaGATGGTGTCGATGAGGGCGTCCACCTGTAGCTTCATCTGGATG +
Preference number: 2 (lower is better)
Translates to: SATGRKQCTKCSFDF*MVSMRASTCSFIWM
Trigger: CATCCAGATGAAGCTACAGGTGGACGCCCTCATCGACACCATCAAGAAGTCAAAGCTGCATTTTGTGCACTGCTTCCTGCCTGTAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp CCGTCGGGGGTTCCAAGTCGTCAAACGCCAGCTCGATGTTCTCCTCCTTGTATCAAGAGTCTGGCATTTTaGGACAGAGGAGCAAAAAGT +
Preference number: 2 (lower is better)
Translates to: PSGVPSRQTPARCSPPCIKSLAF*DRGAKS
Trigger: ACTTTTTGCTCCTCTGTCTCAAAATGCCAGACTCTT...GATACAAGGAGGAGAACATCGAGCTGGCGTTTGACGACTTGGAACCCCCGACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGAAGAGTCTGGCATTTTaGGACAGAGGAGCAAAAAGT +
Preference number: 2 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWKSLAF*DRGAKS
Trigger: ACTTTTTGCTCCTCTGTCTCAAAATGCCAGACTCTT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTCAGGGATGCAGCTGTaGTGGAGAGGTTGGGTATTT +
Preference number: 2 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSGMQL*WRGWVF
Trigger: AAATACCCAACCTCTCCATCACAGCTGCATCCCTGA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCCTTCCCTCTCAAGTTaGGTTTATGGTCCAGACCAC +
Preference number: 2 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKPSLSS*VYGPDH
Trigger: GTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGAATCTCTGTAATTGGTaGGATTTAACAATCAGAGGG +
Preference number: 2 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRNLCNW*DLTIRG
Trigger: CCCTCTGATTGTTAAATCTCACCAATTACAGAGATT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR TCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCACAGCAGGCAGTCATaGAATATTTCTCAACTGTTA +
Preference number: 2 (lower is better)
Translates to: KKVRVFPMQISSRVGETGHSRQS*NISQLL
Trigger: TAACAGTTGAGAAATATTTCATGACTGCCTGCTGTG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAGGACGCTGGACTCATTaGGGTACACCAGTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKGRWTH*GTPVRP
Trigger: TGGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCC...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTAGAGGGAGGTCAACGTaGTGGCTCCATGCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSRGRST*WLHAVP
Trigger: TGGCACTGCATGGAGCCAGCACGTTGACCTCCCTCT...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACACACACACTTGTCTaGGTAGGCTTGCTCAACCCA +
Preference number: 2 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFTHTLV*VGLLNP
Trigger: TGGGTTGAGCAAGCCTACGCAGACAAGTGTGTGTGT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGAGGGTGTACAGAGCCTaGCACTTCTCCACAGAAAAC +
Preference number: 2 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKRVYRA*HFSTEN
Trigger: GTTTTCTGTGGAGAAGTGGCAGGCTCTGTACACCCT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp AACAGGGTTAGGTTCCTGCTGGTTTGTTCATCCCGCTGCTCCTCCAGCCGTGCCAAGCAGTGCACAAAATaGAGCTTTGACTTCTTGATG +
Preference number: 2 (lower is better)
Translates to: NRVRFLLVCSSRCSSSRAKQCTK*SFDFLM
Trigger: CATCAAGAAGTCAAAGCTGCATTTTGTGCACTGCTT...GGCACGGCTGGAGGAGCAGCGGGATGAACAAACCAGCAGGAACCTAACCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATCATTCTTAAGAACCTaGACCCGGCTCTCCTCACCA +
Preference number: 2 (lower is better)
Translates to: GTALGLPSLVEFSGITFLSFLRT*TRLSSP
Trigger: TGGTGAGGAGAGCCGGGTCCAGGTTCTTAAGAATGA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTATCTATCGTGGGGCAATaGAGGGGGCAGTCTCTGTTC +
Preference number: 2 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLSIVGQ*RGQSLF
Trigger: GAACAGAGACTGCCCCCTCCATTGCCCCACGATAGA...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR TCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTAAGAGTCTGGCATTTTaGGACAGAGGAGCAAAAAGT +
Preference number: 2 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPKSLAF*DRGAKS
Trigger: ACTTTTTGCTCCTCTGTCTCAAAATGCCAGACTCTT...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTATTGAGGTACACCAGTaGGGCCAGATCCTCCAGACG +
Preference number: 2 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSIEVHQ*GQILQT
Trigger: CGTCTGGAGGATCTGGCCTCACTGGTGTACCTCAAT...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR TCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGAGCTTACTAAACTGCTaGGCTGCCTTCTGCTTTTCC +
Preference number: 2 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSLLNC*AAFCFS
Trigger: GGAAAAGCAGAAGGCAGCTCAGCAGTTTAGTAAGCT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR GCA 90 bp GAACAAAGCTTTTTACCCCAGGCCGGGTTATTGGAGGTTGATGTTGGAGTTTCCACACACACACTTGTCTaGGTAGGCTTGCTCAACCCA +
Preference number: 2 (lower is better)
Translates to: EQSFLPQAGLLEVDVGVSTHTLV*VGLLNP
Trigger: TGGGTTGAGCAAGCCTACGCAGACAAGTGTGTGTGT...GGAAACTCCAACATCAACCTCCAATAACCCGGCCTGGGGTAAAAAGCTTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR GCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCACCCACTCTAAGCTTATaGATACTAGCAGGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSPTLSL*ILAGAA
Trigger: TGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGG...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCAGACACCCATAGCCTaGAAAGTGCCCCTGACAGAA +
Preference number: 2 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSQTPIA*KVPLTE
Trigger: TTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCCACCTCTTCCACGTaGAGACATCAGACACCCATA +
Preference number: 2 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKPTSST*RHQTPI
Trigger: TATGGGTGTCTGATGTCTCCACGTGGAAGAGGTGGG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAGAAAGGACTGCTCTCTaGAGGGTGAAGATGGAGATG +
Preference number: 2 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKERTAL*RVKMEM
Trigger: CATCTCCATCTTCACCCTTCAGAGAGCAGTCCTTTC...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CCA 90 bp GAACAAAGCTTTTTACCCCAGGCCGGGTTATTGGAGGTTGATGTTGGAGTTTCCCTCAAGTTGAGTTTATaGTCCAGACCACCTGGACAG +
Preference number: 2 (lower is better)
Translates to: EQSFLPQAGLLEVDVGVSLKLSL*SRPPGQ
Trigger: CTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAG...GGAAACTCCAACATCAACCTCCAATAACCCGGCCTGGGGTAAAAAGCTTTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTTCTCAACTGAAACTTaGAGAAGCACTGGTCATGTG +
Preference number: 2 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFFSTET*RSTGHV
Trigger: CACATGACCAGTGCTTCTCCAAGTTTCAGTTGAGAA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR TCA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTCTCTTTCTGGATGGCTaGCATTATCAGAGCCTCGGC +
Preference number: 2 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFLFLDG*HYQSLG
Trigger: GCCGAGGCTCTGATAATGTCAGCCATCCAGAAAGAG...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CCA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTCCCACCTCTTCCACGTaGAGACATCAGACACCCATA +
Preference number: 2 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFPTSST*RHQTPI
Trigger: TATGGGTGTCTGATGTCTCCACGTGGAAGAGGTGGG...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR GCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCAATGCATACTAGCAGGTaGAGCATGTATTTTGTGTCT +
Preference number: 2 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSMHTSR*SMYFVS
Trigger: AGACACAAAATACATGCTGCACCTGCTAGTATGCAT...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR GCA 90 bp TTTGTCACACTAGTCCCTAGTAGAAACAGAAAATGTACCACGCTATGTGAAAACTCCCACTCTCAGGGATaGAGCTGTGATGGAGAGGTT +
Preference number: 2 (lower is better)
Translates to: FVTLVPSRNRKCTTLCENSHSQG*SCDGEV
Trigger: AACCTCTCCATCACAGCTGCATCCCTGAGAGTGGGA...GTTTTCACATAGCGTGGTACATTTTCTGTTTCTACTAGGGACTAGTGTGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CCA 90 bp TTTGTCACACTAGTCCCTAGTAGAAACAGAAAATGTACCACGCTATGTGAAAACCAGACACCCATAGCCTaGAAAGTGCCCCTGACAGAA +
Preference number: 2 (lower is better)
Translates to: FVTLVPSRNRKCTTLCENQTPIA*KVPLTE
Trigger: TTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTG...GTTTTCACATAGCGTGGTACATTTTCTGTTTCTACTAGGGACTAGTGTGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR GCA 90 bp TTTGTCACACTAGTCCCTAGTAGAAACAGAAAATGTACCACGCTATGTGAAAACGGATCAGCCCTGAACTaGTGTAGTTGGAATGGGTTT +
Preference number: 2 (lower is better)
Translates to: FVTLVPSRNRKCTTLCENGSALN*CSWNGF
Trigger: AAACCCATTCCAACTACAGCAGTTCAGGGCTGATCC...GTTTTCACATAGCGTGGTACATTTTCTGTTTCTACTAGGGACTAGTGTGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CCA 90 bp TTTGTCACACTAGTCCCTAGTAGAAACAGAAAATGTACCACGCTATGTGAAAACCCTAGGCTCTTTAAGTaGCACTGGTCTGACACTTTG +
Preference number: 2 (lower is better)
Translates to: FVTLVPSRNRKCTTLCENPRLFK*HWSDTL
Trigger: CAAAGTGTCAGACCAGTGCCACTTAAAGAGCCTAGG...GTTTTCACATAGCGTGGTACATTTTCTGTTTCTACTAGGGACTAGTGTGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR TCA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTTTGACTCAGTATGAGTaGACAGATTTGGGAATTCAT +
Preference number: 2 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFLTQYE*TDLGIH
Trigger: ATGAATTCCCAAATCTGTTCACTCATACTGAGTCAA...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 72 bp CCGCGGAGCTGGGTGCGGAGCAGGGGCACGTCGAGCTaGAGGAGCCCAGCCTCGCAGTGGTCTCCCGAGGGC +
Preference number: 3 (lower is better)
Translates to: PRSWVRSRGTSS*RSPASQWSPEG
Trigger: GCCCTCGGGAGACCACTGCGAGGCTGGGCTCCTGCAGCTCGACGTGCCCCTGCTCCGCACCCAGCTCCGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp GTTTTCCGCATGCTGGTGGCCCGGCGCAGTGCCAGCTaGGAGCCGCCCTCCAGGCCCGCGATGGAGCCAGAG +
Preference number: 3 (lower is better)
Translates to: VFRMLVARRSAS*EPPSRPAMEPE
Trigger: CTCTGGCTCCATCGCGGGCCTGGAGGGCGGCTCGCAGCTGGCACTGCGCCGGGCCACCAGCATGCGGAAAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp ATGCGCATGGCATCGAGCAGGCGGGAGCCGCGGAGCTaGGTGCGGAGCAGGGGCACGTCGAGCTGCAGGAGC +
Preference number: 3 (lower is better)
Translates to: MRMASSRREPRS*VRSRGTSSCRS
Trigger: GCTCCTGCAGCTCGACGTGCCCCTGCTCCGCACCCAGCTCCGCGGCTCCCGCCTGCTCGATGCCATGCGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp GGTAAAGGTTTTCCGCATGCTGGTGGCCCGGCGCAGTaGCAGCTGCGAGCCGCCCTCCAGGCCCGCGATGGA +
Preference number: 3 (lower is better)
Translates to: GKGFPHAGGPAQ*QLRAALQARDG
Trigger: TCCATCGCGGGCCTGGAGGGCGGCTCGCAGCTGGCACTGCGCCGGGCCACCAGCATGCGGAAAACCTTTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp CTTCCAATAGCCAGAGCAGGCCCCTCGCCTCGTCTGTaGGGGCCAGCGAGCGGACCAGGGACTGATGGGAGG +
Preference number: 3 (lower is better)
Translates to: LPIARAGPSPRL*GPASGPGTDGR
Trigger: CCTCCCATCAGTCCCTGGTCCGCTCGCTGGCCCGCACAGACGAGGCGAGGGGCCTGCTCTGGCTATTGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp GGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTGCTGGCGGGCAAACTGCTaGCGCCCAGCCACTGCAGGT +
Preference number: 3 (lower is better)
Translates to: GEELAVEAGRHALKALQCWRANC*RPATAG
Trigger: ACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCA...GCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
3UTR GCA 72 bp GTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTaGACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: VEAGRHALKALQ*TQFRACPISQA
Trigger: GGCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
3UTR GCA 72 bp TTTGTTCATCCCGCTGCTCCTCCAGCCGTGCCAAGGTaGCCGCCCGGAAGAACACCCGGCTCAGGCCCATGC +
Preference number: 3 (lower is better)
Translates to: FVHPAAPPAVPR*PPGRTPGSGPC
Trigger: GCATGGGCCTGAGCCGGGTGTTCTTCCGGGCGGGCACCTTGGCACGGCTGGAGGAGCAGCGGGATGAACAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp GAGCTGCTGCAGAGCCCGCTGACTCTCCTCACTATCTaGCTGCAGGTCCCCGAGCCGCCGTTCCAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: ELLQSPLTLLTI*LQVPEPPFQLP
Trigger: AGGCAGCTGGAACGGCGGCTCGGGGACCTGCAGGCAGATAGTGAGGAGAGTCAGCGGGCTCTGCAGCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp CCATGTGGTCAGGGTAACCTTGGCGGTACATGCGCATaGCATCGAGCAGGCGGGAGCCGCGGAGCTGGGTGC +
Preference number: 3 (lower is better)
Translates to: PCGQGNLGGTCA*HRAGGSRGAGC
Trigger: GCACCCAGCTCCGCGGCTCCCGCCTGCTCGATGCCATGCGCATGTACCGCCAAGGTTACCCTGACCACATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp AGCTCCTCAAAGGAGGCTCCGCGGGCTGACCCACCCTaGTCAGGGTTCTGGAAGCCCGGGGTGTCGACAATC +
Preference number: 3 (lower is better)
Translates to: SSSKEAPRADPP*SGFWKPGVSTI
Trigger: GATTGTCGACACCCCGGGCTTCCAGAACCCTGAGCAGGGTGGGTCAGCCCGCGGAGCCTCCTTTGAGGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp GAGGCTCCGCGGGCTGACCCACCCTGCTCAGGGTTCTaGAAGCCCGGGGTGTCGACAATCATCATGGAGCAG +
Preference number: 3 (lower is better)
Translates to: EAPRADPPCSGF*KPGVSTIIMEQ
Trigger: CTGCTCCATGATGATTGTCGACACCCCGGGCTTCCAGAACCCTGAGCAGGGTGGGTCAGCCCGCGGAGCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp CGTGGTTGCGGACCTGCTGGCCCTCCAGGTGCAGCTTaGTGTCTTGCAGCTCAGCCGTCAGTCGCTGGCACT +
Preference number: 3 (lower is better)
Translates to: RGCGPAGPPGAA*CLAAQPSVAGT
Trigger: AGTGCCAGCGACTGACGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp CAGCCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATaGCGGGCAAACTGCTTGCGCCCAGCCACTGCAGGT +
Preference number: 3 (lower is better)
Translates to: QPSRYAAFWAHS*RANCLRPATAG
Trigger: ACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
3UTR-3UTR CAA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTCGCCCATCTCCTCCTaGGTGTCCCGGAGCTGCCTC +
Preference number: 3 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPSPISS*VSRSCL
Trigger: GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTaGGTAGGCTTGCTCAACCCAGCCCAGCAGCACCGG +
Preference number: 3 (lower is better)
Translates to: GWRCGWSTHTLV*VGLLNPAQQHR
Trigger: CCGGTGCTGCTGGGCTGGGTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR GCA 72 bp CAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTaGGCCCAGCTTCAGCAGCTTCTTTGGTGGCTCCCG +
Preference number: 3 (lower is better)
Translates to: QPSGPTHGGQTA*AQLQQLLWWLP
Trigger: CGGGAGCCACCAAAGAAGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp AGGTGCCCGCCCGGAAGAACACCCGGCTCAGGCCCATaGAGCAGCTGCTCTTCTCCAGATCCAAGCACTCCA +
Preference number: 3 (lower is better)
Translates to: RCPPGRTPGSGP*SSCSSPDPSTP
Trigger: TGGAGTGCTTGGATCTGGAGAAGAGCAGCTGCTGCATGGGCCTGAGCCGGGTGTTCTTCCGGGCGGGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TCCAGTTCGTGGTTGCGGACCTGCTGGCCCTCCAGGTaGAGCTTGGTGTCTTGCAGCTCAGCCGTCAGTCGC +
Preference number: 3 (lower is better)
Translates to: SSSWLRTCWPSR*SLVSCSSAVSR
Trigger: GCGACTGACGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGAACTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp AGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTaGGGGAGACCGGTGCCCCACCACTTCCTGGGAGAG +
Preference number: 3 (lower is better)
Translates to: RSGCFPCRSAVG*GRPVPHHFLGE
Trigger: CTCTCCCAGGAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR CCA 72 bp CAGCCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATaGCGGGCAAACTGCTTGCGCCCAGCTTCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: QPSRYAAFWAHS*RANCLRPASAA
Trigger: AGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp CGGCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTaGTGTCCCGGAGCTGCCTCTGTAGCCGCTTGTTCT +
Preference number: 3 (lower is better)
Translates to: RPPSWQARPSPP*CPGAASVAACS
Trigger: AGAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCACCAGGCACTGCACTaGGGCTCCCAAGTCTGGTGG +
Preference number: 3 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPHQALH*GSQVWW
Trigger: CCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGTG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CAA 90 bp GTCCAGCATGAGCTGGGCATCTGCCAGCAGGGCCTTGGTGCGCTTCAGGTCCTTGGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 3 (lower is better)
Translates to: VQHELGICQQGLGALQVLGHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCC...AAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAGATGCCCAGCTCATGCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp CTCCGCGTCCAGCAGCTGGGAGGCGGACTCTCCTGTGTTACGCTCATCTGTCAGTCCGCCTTCTCGAGCTaGCTCCGCAGCTGCTGGATC +
Preference number: 3 (lower is better)
Translates to: LRVQQLGGGLSCVTLICQSAFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGGA...CTGACAGATGAGCGTAACACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp GAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCTGCAGGGTGCCACCCTaGTGCTGGTGCTTGAAGATG +
Preference number: 3 (lower is better)
Translates to: EKGEELAVEAGRHALKALCRVPP*CWCLKM
Trigger: CATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCA...GAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
3UTR TCA 72 bp GGTGTGCAGGACGCTGGACTCATTGAGGTACACCAGTaGGGCCAGATCCTCCAGACGGTCGCAGGAGGGAGC +
Preference number: 3 (lower is better)
Translates to: GVQDAGLIEVHQ*GQILQTVAGGS
Trigger: GCTCCCTCCTGCGACCGTCTGGAGGATCTGGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCCTGCACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp GCTCATCAGCATCGCCCTGTATGCGGTCTGGGCCACTaGATAGATGTGGGGTGCCATGTCCTCCCGCCGACA +
Preference number: 3 (lower is better)
Translates to: AHQHRPVCGLGH*IDVGCHVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTATGCAGTGGCCCAGACCGCATACAGGGCGATGCTGATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp CTGATGCCCGCGATGGTGGCCAGGTACTGCACCAGATaGTGGCAGCTGGTGGTCTTGCCACTGCCACTACTG +
Preference number: 3 (lower is better)
Translates to: LMPAMVARYCTR*WQLVVLPLPLL
Trigger: CAGTAGTGGCAGTGGCAAGACCACCAGCTGCCAGCATCTGGTGCAGTACCTGGCCACCATCGCGGGCATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp AACAGGGTTAGGTTCCTGCTGGTTTGTTCATCCCGCTaGTCCTCCAGCCGTGCCAAGGTGCCCGCCCGGAAG +
Preference number: 3 (lower is better)
Translates to: NRVRFLLVCSSR*SSSRAKVPARK
Trigger: CTTCCGGGCGGGCACCTTGGCACGGCTGGAGGAGCAGCGGGATGAACAAACCAGCAGGAACCTAACCCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TCCCCGAGCCGCCGTTCCAGCTGCCTCTTGTTCTGCTaGTCCACCTCCAGCTTGTCCTCAAACTCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: SPSRRSSCLLFC*STSSLSSNSCW
Trigger: CCAGCAGGAGTTTGAGGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGAACGGCGGCTCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp CGGACCTGCTGGCCCTCCAGGTGCAGCTTGGTGTCTTaGAGCTCAGCCGTCAGTCGCTGGCACTTCTTCTTG +
Preference number: 3 (lower is better)
Translates to: RTCWPSRCSLVS*SSAVSRWHFFL
Trigger: CAAGAAGAAGTGCCAGCGACTGACGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp GCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTaGCTCTGTAGCCGCTTGTTCTGTTCCTTCTCCCGG +
Preference number: 3 (lower is better)
Translates to: ASSPISSLVSRS*LCSRLFCSFSR
Trigger: CCGGGAGAAGGAACAGAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TGGGGTGAGAGGGCTGCCAACCACTCCCCTGGGCTATaGGTTAGTCTCCGTCAGCTTGGCCTCTGTGTCGCT +
Preference number: 3 (lower is better)
Translates to: WGERAANHSPGL*VSLRQLGLCVA
Trigger: AGCGACACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTGGTTGGCAGCCCTCTCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTaGTTGCGCCCAGCCACTGCAGGTTACCTTTGGTGG +
Preference number: 3 (lower is better)
Translates to: YAAFWAHSWRAN*LRPATAGYLWW
Trigger: CCACCAAAGGTAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
3UTR CCA 72 bp ACCGGAGAGCCCCTCCGCACCTCATTCTTAAGAACCTaGACCCGGCTCTCCTCACCAGCGTCTCCAGCTGCA +
Preference number: 3 (lower is better)
Translates to: TGEPLRTSFLRT*TRLSSPASPAA
Trigger: TGCAGCTGGAGACGCTGGTGAGGAGAGCCGGGTCCAGGTTCTTAAGAATGAGGTGCGGAGGGGCTCTCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR CCA 72 bp CTGGGAGCACTGTTCTTCAGGTGGTCCAGCATGAGCTaGGCATCTGCCAGCAGGGCCTTGGTGCGCTTCAGG +
Preference number: 3 (lower is better)
Translates to: LGALFFRWSSMS*ASASRALVRFR
Trigger: CCTGAAGCGCACCAAGGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCACCTGAAGAACAGTGCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp AACAGGGTTAGGTTCCTGCTGGTTTGTTCATCCCGCTGCTCCTCCAGCCGTGCCCACCAGGCACTGCACTaGGGCTCCCAAGTCTGGTGG +
Preference number: 3 (lower is better)
Translates to: NRVRFLLVCSSRCSSSRAHQALH*GSQVWW
Trigger: CCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGTG...GGCACGGCTGGAGGAGCAGCGGGATGAACAAACCAGCAGGAACCTAACCCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp CCAGGACTTGACCCCGTCAACACGGTCCTCCAGCTCCGAGTCCACATCAGAGTCGTGCAGCTTGGTGTCTaGCAGCTCAGCCGTCAGTCG +
Preference number: 3 (lower is better)
Translates to: PGLDPVNTVLQLRVHIRVVQLGV*QLSRQS
Trigger: CGACTGACGGCTGAGCTGCAAGACACCAAGCTGCAC...GACTCTGATGTGGACTCGGAGCTGGAGGACCGTGTTGACGGGGTCAAGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 72 bp GGTCTGACACTTTGGGGAGCAGGCCAGAGACCAGGGTaGTGCCCTCACGGTCCCCATCAGAATCCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: GLTLWGAGQRPG*CPHGPHQNPAS
Trigger: AGAGGCAGGATTCTGATGGGGACCGTGAGGGCATCACCCTGGTCTCTGGCCTGCTCCCCAAAGTGTCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 72 bp AGCGCTGGCGCAAGGTGTGCAGGACGCTGGACTCATTaGGGTACACCAGTGAGGCCAGATCCTCCAGACGGT +
Preference number: 3 (lower is better)
Translates to: SAGARCAGRWTH*GTPVRPDPPDG
Trigger: ACCGTCTGGAGGATCTGGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCCTGCACACCTTGCGCCAGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 72 bp TGCCATCCCCACAGGCCAGCAGGTAGTAGAAGACGTTaGATGTGGCTTCACTGGCTGGGCGCCGAGCCACAC +
Preference number: 3 (lower is better)
Translates to: CHPHRPAGSRRR*MWLHWLGAEPH
Trigger: GTGTGGCTCGGCGCCCAGCCAGTGAAGCCACATTCAACGTCTTCTACTACCTGCTGGCCTGTGGGGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTaGTTGCGCCCAGCTTCAGCAGCTTCTTTGGTGGCT +
Preference number: 3 (lower is better)
Translates to: YAAFWAHSWRAN*LRPASAASLVA
Trigger: AGCCACCAAAGAAGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TCCTGCCTGCTCACCAGGGACTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGGCTCTGGAGGGCTTGT +
Preference number: 3 (lower is better)
Translates to: SCLLTRDLSTMD*SRNSTWLWRAC
Trigger: ACAAGCCCTCCAGAGCCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAAGTCCCTGGTGAGCAGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp CCAGGCTTTCTAGATCCATCTCCAGTTCGTGCTTCTTaGGGCTCGCCTCGGCCTCCTTCCTGGCAAGCTCGC +
Preference number: 3 (lower is better)
Translates to: PGFLDPSPVRAS*GSPRPPSWQAR
Trigger: GCGAGCTTGCCAGGAAGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGGAGATGGATCTAGAAAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp CTGCCACTTTATTTTCTGGGCACAGACTGGGCACCATaGGGAGTCCCACAGGGGCACTGGTTCCCGCCCATG +
Preference number: 3 (lower is better)
Translates to: LPLYFLGTDWAP*GVPQGHWFPPM
Trigger: CATGGGCGGGAACCAGTGCCCCTGTGGGACTCCCCATGGTGCCCAGTCTGTGCCCAGAAAATAAAGTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CCA 72 bp CCCTGCAGGCTGCTTGGAACAGGGTTAGGTTCCTGCTaGTTTGTTCATCCCGCTGCTCCTCCAGCCGTGCCA +
Preference number: 3 (lower is better)
Translates to: PCRLLGTGLGSC*FVHPAAPPAVP
Trigger: TGGCACGGCTGGAGGAGCAGCGGGATGAACAAACCAGCAGGAACCTAACCCTGTTCCAAGCAGCCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp GCAATCTCTCGCTTGCTGGGAGCACTGTTCTTCAGGTaGTCCAGCATGAGCTGGGCATCTGCCAGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: AISRLLGALFFR*SSMSWASASRA
Trigger: GGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCACCTGAAGAACAGTGCTCCCAGCAAGCGAGAGATTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp AACTCCTGCTGGAGCCGTTTCTTGGTGAAGTCCACCTCCCGCACAGCCCGCTCAATTCCCGAGTCGTTCTaGGGAGCCCCAGCTACCACT +
Preference number: 3 (lower is better)
Translates to: NSCWSRFLVKSTSRTARSIPESF*GAPATT
Trigger: AGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAAT...TGAGCGGGCTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCAGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp CCAGGACTTGACCCCGTCAACACGGTCCTCCAGCTCCGAGTCCACATCAGAGTCTCCACAGAAAACACCTaGTTCCCGCTGATGCCCGCG +
Preference number: 3 (lower is better)
Translates to: PGLDPVNTVLQLRVHIRVSTENT*FPLMPA
Trigger: CGCGGGCATCAGCGGGAACAAGGTGTTTTCTGTGGA...GACTCTGATGTGGACTCGGAGCTGGAGGACCGTGTTGACGGGGTCAAGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 72 bp TCCTCCAGCCGGTTCTGGATCTCATTCTTCTCACGCTaGAGGCGGCTCAGCTGCTCCTCCAGCGCTGTCTTG +
Preference number: 3 (lower is better)
Translates to: SSSRFWISFFSR*RRLSCSSSAVL
Trigger: CAAGACAGCGCTGGAGGAGCAGCTGAGCCGCCTTCAGCGTGAGAAGAATGAGATCCAGAACCGGCTGGAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp CCTGTATGCGGTCTGGGCCACTGCATAGATGTGGGGTaGCATGTCCTCCCGCCGACAACCCTTGAACATGTG +
Preference number: 3 (lower is better)
Translates to: PVCGLGHCIDVG*HVLPPTTLEHV
Trigger: CACATGTTCAAGGGTTGTCGGCGGGAGGACATGGCACCCCACATCTATGCAGTGGCCCAGACCGCATACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp CTCTCCTTCTCCGCCTTCTCGAGCTTGCTCCGCAGCTaGTGGATCTCCTCGTCTTTGTTCCGGATCTGCTCC +
Preference number: 3 (lower is better)
Translates to: LSFSAFSSLLRS*WISSSLFRICS
Trigger: GGAGCAGATCCGGAACAAAGACGAGGAGATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGGAGAAGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp GCAGCTCGTTCCTCTCCTTCTCCGCCTTCTCGAGCTTaGTCCGCAGCTGCTGGATCTCCTCGTCTTTGTTCC +
Preference number: 3 (lower is better)
Translates to: AARSSPSPPSRA*SAAAGSPRLCS
Trigger: GGAACAAAGACGAGGAGATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGGAGAAGGAGAGGAACGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TCCAGGCGTGTCTCCAGCTCCCGTATCTTAGCTTCCTaGCTGCTCACCAGGGACTTGTCCACCATGGACTGC +
Preference number: 3 (lower is better)
Translates to: SRRVSSSRILAS*LLTRDLSTMDC
Trigger: GCAGTCCATGGTGGACAAGTCCCTGGTGAGCAGGCAGGAAGCTAAGATACGGGAGCTGGAGACACGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp ACAGACTGGGCACCATGGGGAGTCCCACAGGGGCACTaGTTCCCGCCCATGCTTATTCAGGAGTCAGAGCAA +
Preference number: 3 (lower is better)
Translates to: TDWAPWGVPQGH*FPPMLIQESEQ
Trigger: TTGCTCTGACTCCTGAATAAGCATGGGCGGGAACCAGTGCCCCTGTGGGACTCCCCATGGTGCCCAGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CCA 72 bp ACGTCATCCTCATCCACATCCAGGATGGCCCCATCGTaGTCCAGCTTCACACGCACCTTCCCCTCAGGCAAG +
Preference number: 3 (lower is better)
Translates to: TSSSSTSRMAPS*SSFTRTFPSGK
Trigger: CTTGCCTGAGGGGAAGGTGCGTGTGAAGCTGGACCACGATGGGGCCATCCTGGATGTGGATGAGGATGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp GGCGGCTCAGCTGCTCCTCCAGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCAGGTGCAGGTCTTCGA +
Preference number: 3 (lower is better)
Translates to: GGSAAPPALSWL*RCHQSAGAGLR
Trigger: TCGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGAGCAGCTGAGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp TCCACCATGGACTGCTCCAGGAACTCCACCTGGCTCTaGAGGGCTTGTAGCTTCTCCTGCAGCTCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: STMDCSRNSTWL*RACSFSCSSCF
Trigger: GAAGCAGGAGCTGCAGGAGAAGCTACAAGCCCTCCAGAGCCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTATTCCCGAGTCGTTCTaGGGAGCCCCAGCTACCACT +
Preference number: 3 (lower is better)
Translates to: KKVRVFPMQISSRVGETGIPESF*GAPATT
Trigger: AGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAAT...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR-3UTR CAA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCAGGCAGGCAGATCACTaGAGGTCAGAAGTTCGAGAC +
Preference number: 3 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPRQADH*RSEVRD
Trigger: GTCTCGAACTTCTGACCTCAAGTGATCTGCCTGCCT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 72 bp TGGTGGTCTTGCCACTGCCACTACTGCCCAGGAGGATaGTTGACTGATCCTGACGGCTCATCAGCATCGCCC +
Preference number: 3 (lower is better)
Translates to: WWSCHCHYCPGG*LTDPDGSSASP
Trigger: GGGCGATGCTGATGAGCCGTCAGGATCAGTCAATCATCCTCCTGGGCAGTAGTGGCAGTGGCAAGACCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 72 bp CTTGCAGCTCAGCCGTCAGTCGCTGGCACTTCTTCTTaGGCTGCTGCAGAGCCCGCTGACTCTCCTCACTAT +
Preference number: 3 (lower is better)
Translates to: LAAQPSVAGTSS*AAAEPADSPHY
Trigger: ATAGTGAGGAGAGTCAGCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGCGACTGACGGCTGAGCTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TCTCCTCCTTGTATCTTTCCAACTCCTGCACGAAGGTaGGCTCGTGGAAGAGCCTCTGCAGCCGGTCTTGGG +
Preference number: 3 (lower is better)
Translates to: SPPCIFPTPARR*ARGRASAAGLG
Trigger: CCCAAGACCGGCTGCAGAGGCTCTTCCACGAGCGCACCTTCGTGCAGGAGTTGGAAAGATACAAGGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TTGAGACGGCTAGCCAGGCTCTCCAGCCGTTTCACTTaGGTCCTTTCAAACTCCAGGCGTGTCTCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: LRRLARLSSRFT*VLSNSRRVSSS
Trigger: GGAGCTGGAGACACGCCTGGAGTTTGAAAGGACGCAAGTGAAACGGCTGGAGAGCCTGGCTAGCCGTCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp GAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTaGTCATCATCTGACCGATCAGGGGCAAGGGACTTC +
Preference number: 3 (lower is better)
Translates to: EYRGLEVLSRGS*SSSDRSGARDF
Trigger: GAAGTCCCTTGCCCCTGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000636100.1
3UTR CCA 72 bp AGGGTGAAGATGGAGATGACATTCCCGAGTCGTTCTTaGGAGCCCCAGCTACCACTACAGCCCCCTCCCACT +
Preference number: 3 (lower is better)
Translates to: RVKMEMTFPSRS*EPQLPLQPPPT
Trigger: AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCCATCTTCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR CCA 72 bp TTTCATCCACCACGATGTAGTTACGCCCGTGTTTCTTaGTCAGGTGCGGGGCCAGGACATCAAAGCGGCGGC +
Preference number: 3 (lower is better)
Translates to: FHPPRCSYARVS*SGAGPGHQSGG
Trigger: GCCGCCGCTTTGATGTCCTGGCCCCGCACCTGACCAAGAAACACGGGCGTAACTACATCGTGGTGGATGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTCCCCTCAGGCAAGTaGAGCTCCTCAGATTTGAGT +
Preference number: 3 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRFPSGK*SSSDLS
Trigger: ACTCAAATCTGAGGAGCTCAACTTGCCTGAGGGGAA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 72 bp GCTTGTCCTCAAACTCCTGCTGGAGCCGTTTCTTGGTaGAGTCCACCTCCCGCACAGCCCGCTCATACTTCA +
Preference number: 3 (lower is better)
Translates to: ACPQTPAGAVSW*SPPPAQPAHTS
Trigger: TGAAGTATGAGCGGGCTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCAGGAGTTTGAGGACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp CTTCATGGCCGCCTGCAGCTTACTAAACTGCTGAGCTaGCTTCTGCTTTTCCTCAGGCTTGGCCAGTGGCAC +
Preference number: 3 (lower is better)
Translates to: LHGRLQLTKLLS*LLLFLRLGQWH
Trigger: GTGCCACTGGCCAAGCCTGAGGAAAAGCAGAAGGCAGCTCAGCAGTTTAGTAAGCTGCAGGCGGCCATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TGCATCATCATCATCCACTTCCCCGTTGATCTCCGCTaGCCGGATGAGACGGGCCTCCATCACCTCCATTTC +
Preference number: 3 (lower is better)
Translates to: CIIIIHFPVDLR*PDETGLHHLHF
Trigger: GAAATGGAGGTGATGGAGGCCCGTCTCATCCGGGCAGCGGAGATCAACGGGGAAGTGGATGATGATGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TTGCCCTCCAGCTCCCGCTTCTCTCGCAGAACCTTCTaGTTGTCCTCATACTCTTCCTCTAGCTGCACCTCC +
Preference number: 3 (lower is better)
Translates to: LPSSSRFSRRTF*LSSYSSSSCTS
Trigger: GGAGGTGCAGCTAGAGGAAGAGTATGAGGACAAGCAGAAGGTTCTGCGAGAGAAGCGGGAGCTGGAGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp CAGGTAGTAGAAGACGTTGAATGTGGCTTCACTGGCTaGGCGCCGAGCCACACGCAGCTTCTCCAGAAGCAT +
Preference number: 3 (lower is better)
Translates to: QVVEDVECGFTG*APSHTQLLQKH
Trigger: ATGCTTCTGGAGAAGCTGCGTGTGGCTCGGCGCCCAGCCAGTGAAGCCACATTCAACGTCTTCTACTACCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp GGGGTGTCGACAATCATCATGGAGCAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTATTCACCAGGGAGACG +
Preference number: 3 (lower is better)
Translates to: GVSTIIMEQSEC*LDLRALFTRET
Trigger: CGTCTCCCTGGTGAATAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGCTCCATGATGATTGTCGACACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCGCAGAACCTTCTGCTaGTCCTCATACTCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: KKVRVFPMQISSRVGETGRRTFC*SSYSSS
Trigger: AGAGGAAGAGTATGAGGACAAGCAGAAGGTTCTGCG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 72 bp CTGGATCTCCTCGTCTTTGTTCCGGATCTGCTCCTCTaGCAGCTGTACTTCGATGAGGGGCCTCACTGTGGT +
Preference number: 3 (lower is better)
Translates to: LDLLVFVPDLLL*QLYFDEGPHCG
Trigger: ACCACAGTGAGGCCCCTCATCGAAGTACAGCTGTCAGAGGAGCAGATCCGGAACAAAGACGAGGAGATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 72 bp TTCTGTTCCTTCTCCCGGTTCTCGGCTGCAATGCGCTaGTCCCGCTCCTCAGTCAGCTTCTCCATGTTTTCC +
Preference number: 3 (lower is better)
Translates to: FCSFSRFSAAMR*SRSSVSFSMFS
Trigger: GGAAAACATGGAGAAGCTGACTGAGGAGCGGGATCAGCGCATTGCAGCCGAGAACCGGGAGAAGGAACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp AATCTGCAGGTGCAGGTCTTCGATCTCCACCTCCATTaGTTTCCGTGCTTTCACGGCTGCCGCACAGGTGAA +
Preference number: 3 (lower is better)
Translates to: NLQVQVFDLHLH*FPCFHGCRTGE
Trigger: TTCACCTGTGCGGCAGCCGTGAAAGCACGGAAAGCAATGGAGGTGGAGATCGAAGACCTGCACCTGCAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TCCCCGATGCGCTTGAATGCCAACTTTAGGTCAGCCTaGAGGCTCTGGTTAGCAGCCTCCAGGCTTTCTAGA +
Preference number: 3 (lower is better)
Translates to: SPMRLNANFRSA*RLWLAASRLSR
Trigger: TCTAGAAAGCCTGGAGGCTGCTAACCAGAGCCTGCAGGCTGACCTAAAGTTGGCATTCAAGCGCATCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp CACATGGGTCTGCTCCAGCCCTCGTCCGCAAAACCCTaGAGGATGGATACTATGATGTGTTCCTCTCTACCC +
Preference number: 3 (lower is better)
Translates to: HMGLLQPSSAKP*RMDTMMCSSLP
Trigger: GGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGGTTTTGCGGACGAGGGCTGGAGCAGACCCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CCA 72 bp AGTTCAGCCAGCCAGTCACATTGTACTCTACCCAGTTaGTGCCATGGCTGTGGCCCAGGAGAAAGTGGTGTG +
Preference number: 3 (lower is better)
Translates to: SSASQSHCTLPS*CHGCGPGESGV
Trigger: CACACCACTTTCTCCTGGGCCACAGCCATGGCACCAACTGGGTAGAGTACAATGTGACTGGCTGGCTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp CGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTaGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTG +
Preference number: 3 (lower is better)
Translates to: RCHSDNCGSIAV*RCCREGRAHHL
Trigger: CAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000636100.1
3UTR-3UTR CAA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCACACTGGTCTGACACTTaGGGGAGCAGGCCAGAGACC +
Preference number: 3 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSHWSDT*GSRPET
Trigger: GGTCTCTGGCCTGCTCCCCAAAGTGTCAGACCAGTG...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CAA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCCGGGTTATTGGAGGTaGATGTTGGAGTTTCCAGTT +
Preference number: 3 (lower is better)
Translates to: KKVRVFPMQISSRVGETGPGYWR*MLEFPV
Trigger: AACTGGAAACTCCAACATCAACCTCCAATAACCCGG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CAA 90 bp AACAGGGTTAGGTTCCTGCTGGTTTGTTCATCCCGCTGCTCCTCCAGCCGTGCCTCGATGTTCTCCTCCTaGTATCTTTCCAACTCCTGC +
Preference number: 3 (lower is better)
Translates to: NRVRFLLVCSSRCSSSRASMFSS*YLSNSC
Trigger: GCAGGAGTTGGAAAGATACAAGGAGGAGAACATCGA...GGCACGGCTGGAGGAGCAGCGGGATGAACAAACCAGCAGGAACCTAACCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp AGCAGGCTGGCTTTGAGCCTGGCAAAGGGCCAGATTTaGCTTCTGCAACATCTTAGGGACCAGAGGTACCAT +
Preference number: 3 (lower is better)
Translates to: SRLALSLAKGQI*LLQHLRDQRYH
Trigger: ATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGCAAATCTGGCCCTTTGCCAGGCTCAAAGCCAGCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 72 bp CTTGGCCAGTGGCACAATCCCAAACACATTGTTCTCTaGCAAGTGGTTGAGGTGGAGCTCTGTCCTGAGGGT +
Preference number: 3 (lower is better)
Translates to: LGQWHNPKHIVL*QVVEVELCPEG
Trigger: ACCCTCAGGACAGAGCTCCACCTCAACCACTTGGCAGAGAACAATGTGTTTGGGATTGTGCCACTGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR GCA 72 bp TCCAGCGCTGTCTTGGCTTTGGCGATGTCATCAATCTaGAGGTGCAGGTCTTCGATCTCCACCTCCATTGCT +
Preference number: 3 (lower is better)
Translates to: SSAVLALAMSSI*RCRSSISTSIA
Trigger: AGCAATGGAGGTGGAGATCGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGCGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CCA 72 bp CGCTTGAATGCCAACTTTAGGTCAGCCTGCAGGCTCTaGTTAGCAGCCTCCAGGCTTTCTAGATCCATCTCC +
Preference number: 3 (lower is better)
Translates to: RLNANFRSACRL*LAASRLSRSIS
Trigger: GGAGATGGATCTAGAAAGCCTGGAGGCTGCTAACCAGAGCCTGCAGGCTGACCTAAAGTTGGCATTCAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTCCCGCCGACAACCCTaGAACATGTGCATCACCTTC +
Preference number: 3 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSRRQP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGTTGTCGGCGGGA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR TCA 72 bp TCTGCAGTTATAGAGGAGGATCTAGCAGGCTGGCTTTaGGCCTGGCAAAGGGCCAGATTTGCCTTCTGCAAC +
Preference number: 3 (lower is better)
Translates to: SAVIEEDLAGWL*AWQRARFAFCN
Trigger: GTTGCAGAAGGCAAATCTGGCCCTTTGCCAGGCTCAAAGCCAGCCTGCTAGATCCTCCTCTATAACTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 72 bp GCTGTCTTGGCTTTGGCGATGTCATCAATCTGCAGGTaGAGGTCTTCGATCTCCACCTCCATTGCTTTCCGT +
Preference number: 3 (lower is better)
Translates to: AVLALAMSSICR*RSSISTSIAFR
Trigger: ACGGAAAGCAATGGAGGTGGAGATCGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGCCTTCCCTCTCAAGTaGAGTTTATGGTCCAGACCA +
Preference number: 3 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWAFPLK*SLWSRP
Trigger: TGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGC...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR GCA 72 bp CATGCTTATTCAGGAGTCAGAGCAATCCCGGGGATCTaGAGTTATAGAGGAGGATCTAGCAGGCTGGCTTTG +
Preference number: 3 (lower is better)
Translates to: HAYSGVRAIPGI*SYRGGSSRLAL
Trigger: CAAAGCCAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CCA 72 bp CCTGAATCACAGTCCCTAGGCTCTTCACATAAAAGGTaGGGCTTGTGTCTTCCTTGGCCAATCCCCTCATTC +
Preference number: 3 (lower is better)
Translates to: PESQSLGSSHKR*GLCLPWPIPSF
Trigger: GAATGAGGGGATTGGCCAAGGAAGACACAAGCCCCACCTTTTATGTGAAGAGCCTAGGGACTGTGATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CCA 72 bp GGGGCCAAGGGAATTGTCTCCTTCTCAACTGAAACTTaGAGAAGCACTGGTCATGTGACAATGCACAGCCAG +
Preference number: 3 (lower is better)
Translates to: GAKGIVSFSTET*RSTGHVTMHSQ
Trigger: CTGGCTGTGCATTGTCACATGACCAGTGCTTCTCCAAGTTTCAGTTGAGAAGGAGACAATTCCCTTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 72 bp CTCCTCTGGGGCCAAGGGAATTGTCTCCTTCTCAACTaGAACTTGGAGAAGCACTGGTCATGTGACAATGCA +
Preference number: 3 (lower is better)
Translates to: LLWGQGNCLLLN*NLEKHWSCDNA
Trigger: TGCATTGTCACATGACCAGTGCTTCTCCAAGTTTCAGTTGAGAAGGAGACAATTCCCTTGGCCCCAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 72 bp CTTGTTAGGTCTTATGTAATTATTTCCACATGGGTCTaGTCCAGCCCTCGTCCGCAAAACCCTGGAGGATGG +
Preference number: 3 (lower is better)
Translates to: LVRSYVIISTWV*SSPRPQNPGGW
Trigger: CCATCCTCCAGGGTTTTGCGGACGAGGGCTGGAGCAGACCCATGTGGAAATAATTACATAAGACCTAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CCA 72 bp TGTTTCTATCCTCTTCTCTGTTCTATCGTGGGGCAATaGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTT +
Preference number: 3 (lower is better)
Translates to: CFYPLLCSIVGQ*RGQSLFETDPL
Trigger: AAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGATAGAACAGAGAAGAGGATAGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CCA 72 bp ATGTCCTGGAGCTCTGCCTCTAGAGACACAACCTTCTaGGTGAACCCTGCAATGTCCATGTCTTTTTCCTCT +
Preference number: 3 (lower is better)
Translates to: MSWSSASRDTTF*VNPAMSMSFSS
Trigger: AGAGGAAAAAGACATGGACATTGCAGGGTTCACCCAGAAGGTTGTGTCTCTAGAGGCAGAGCTCCAGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR-3UTR CAA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCGCCTTCCCTCTCAAGTaGAGTTTATGGTCCAGACCA +
Preference number: 3 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCAFPLK*SLWSRP
Trigger: TGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGC...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CAA 90 bp GAACAAAGCTTTTTACCCCAGGCCGGGTTATTGGAGGTTGATGTTGGAGTTTCCCATAAAAGGTGGGGCTaGTGTCTTCCTTGGCCAATC +
Preference number: 3 (lower is better)
Translates to: EQSFLPQAGLLEVDVGVSHKRWG*CLPWPI
Trigger: GATTGGCCAAGGAAGACACAAGCCCCACCTTTTATG...GGAAACTCCAACATCAACCTCCAATAACCCGGCCTGGGGTAAAAAGCTTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CAA 90 bp GAACAAAGCTTTTTACCCCAGGCCGGGTTATTGGAGGTTGATGTTGGAGTTTCCGAGGAGGGGTGTCATTaGTTTCTTGCCTTTCTGCAT +
Preference number: 3 (lower is better)
Translates to: EQSFLPQAGLLEVDVGVSEEGCH*FLAFLH
Trigger: ATGCAGAAAGGCAAGAAACAAATGACACCCCTCCTC...GGAAACTCCAACATCAACCTCCAATAACCCGGCCTGGGGTAAAAAGCTTTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR-3UTR CAA 90 bp TTTGTCACACTAGTCCCTAGTAGAAACAGAAAATGTACCACGCTATGTGAAAACATTCCCGAGTCGTTCTaGGGAGCCCCAGCTACCACT +
Preference number: 3 (lower is better)
Translates to: FVTLVPSRNRKCTTLCENIPESF*GAPATT
Trigger: AGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAAT...GTTTTCACATAGCGTGGTACATTTTCTGTTTCTACTAGGGACTAGTGTGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 72 bp ACAAAGCTTTTTACCCCAGGCCGGGTTATTGGAGGTTaGTGTTGGAGTTTCCAGTTAACCAGAGGCTTGACT +
Preference number: 3 (lower is better)
Translates to: TKLFTPGRVIGG*CWSFQLTRGLT
Trigger: AGTCAAGCCTCTGGTTAACTGGAAACTCCAACATCAACCTCCAATAACCCGGCCTGGGGTAAAAAGCTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 72 bp TCAATATGCCTTTCCCAGCAACTGTACCTGTGGAAGTaGTATTTTCAAGCCCTGGTCAAAATAGCAGCTCCT +
Preference number: 3 (lower is better)
Translates to: SICLSQQLYLWK*YFQALVKIAAP
Trigger: AGGAGCTGCTATTTTGACCAGGGCTTGAAAATAGCACTTCCACAGGTACAGTTGCTGGGAAAGGCATATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 72 bp AGTTTCCAGTTAACCAGAGGCTTGACTCAGTATGAGTaGACAGATTTGGGAATTCATCTAAAGGTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: SFQLTRGLTQYE*TDLGIHLKVAG
Trigger: CCCTGCCACCTTTAGATGAATTCCCAAATCTGTTCACTCATACTGAGTCAAGCCTCTGGTTAACTGGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 72 bp TTGGAGTTTCCAGTTAACCAGAGGCTTGACTCAGTATaGGTGAACAGATTTGGGAATTCATCTAAAGGTGGC +
Preference number: 3 (lower is better)
Translates to: LEFPVNQRLDSV*VNRFGNSSKGG
Trigger: GCCACCTTTAGATGAATTCCCAAATCTGTTCACTCATACTGAGTCAAGCCTCTGGTTAACTGGAAACTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CCA 72 bp TTCTTCTCAATATGCCTTTCCCAGCAACTGTACCTGTaGAAGTGCTATTTTCAAGCCCTGGTCAAAATAGCA +
Preference number: 3 (lower is better)
Translates to: FFSICLSQQLYL*KCYFQALVKIA
Trigger: TGCTATTTTGACCAGGGCTTGAAAATAGCACTTCCACAGGTACAGTTGCTGGGAAAGGCATATTGAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR GCA 72 bp ACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATaGATACTAGCAGGTGCAGCATGTATTTTGTGTCTA +
Preference number: 3 (lower is better)
Translates to: TMMCSSLPTLSL*ILAGAACILCL
Trigger: TAGACACAAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR TCA 72 bp GAAGAGAAGAGAAGAGAAGAGAATCTCTGTAATTGGTaGGATTTAACAATCAGAGGGACCTCAACATTCCCT +
Preference number: 3 (lower is better)
Translates to: EEKRREENLCNW*DLTIRGTSTFP
Trigger: AGGGAATGTTGAGGTCCCTCTGATTGTTAAATCTCACCAATTACAGAGATTCTCTTCTCTTCTCTTCTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp TGGCCCGGCGCAGTGCCAGCTGCGAGCCGCCCTCCAGGCCCGCGATGGAGCCAGTTTTCCGCATGCTGGTaGCCCGGCGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: WPGAVPAASRPPGPRWSQFSACW*PGAVPA
Trigger: AGCTGGCACTGCGCCGGGCCACCAGCATGCGGAAAA...CTGGCTCCATCGCGGGCCTGGAGGGCGGCTCGCAGCTGGCACTGCGCCGGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp TCGGGGCCCTGGCGGAAGGAGGTGGAGCGCTGCAGGGTGCCACCCTTGTGCTGGGGTGGAGCTCTGTCCTaGGGGTGCCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SGPWRKEVERCRVPPLCWGGALS*GCHPHR
Trigger: CCTGTGGGGATGGCACCCTCAGGACAGAGCTCCACC...CCAGCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGGGCCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR GCA 90 bp TGGCCCGGCGCAGTGCCAGCTGCGAGCCGCCCTCCAGGCCCGCGATGGAGCCAGTCCATCTCCAGTTCGTaGTTCTTGCGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: WPGAVPAASRPPGPRWSQSISSS*FLRLAS
Trigger: CGAGGCGAGCCGCAAGAAGCACGAACTGGAGATGGA...CTGGCTCCATCGCGGGCCTGGAGGGCGGCTCGCAGCTGGCACTGCGCCGGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TGGCCCGGCGCAGTGCCAGCTGCGAGCCGCCCTCCAGGCCCGCGATGGAGCCAGCATCCACATCCAGGATaGCCCCATCGTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WPGAVPAASRPPGPRWSQHPHPG*PHRGPA
Trigger: AGCTGGACCACGATGGGGCCATCCTGGATGTGGATG...CTGGCTCCATCGCGGGCCTGGAGGGCGGCTCGCAGCTGGCACTGCGCCGGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TCGGGGCCCTGGCGGAAGGAGGTGGAGCGCTGCAGGGTGCCACCCTTGTGCTGGACTTTCCGCATGGCCTaGCCTGGAGCAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SGPWRKEVERCRVPPLCWTFRMA*PGAAQS
Trigger: GCTCTGGGCTGCTCCAGGCCAGGCCATGCGGAAAGT...CCAGCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGGGCCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GTTACGCCCGTGTTTCTTGGTCAGGTGCGGGGCCAGGACATCAAAGCGGCGGCGCCCTCGCCTCGTCTGTaGGGGCCAGCGAGCGGACCA +
Preference number: 4 (lower is better)
Translates to: VTPVFLGQVRGQDIKAAAPSPRL*GPASGP
Trigger: TGGTCCGCTCGCTGGCCCGCACAGACGAGGCGAGGG...CGCCGCCGCTTTGATGTCCTGGCCCCGCACCTGACCAAGAAACACGGGCGTAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCACCAGCCGTGCCAAGGTaGCCGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: PAAMPSRHSSALSFGPVPPAVPR*PPGRTP
Trigger: GGGTGTTCTTCCGGGCGGGCACCTTGGCACGGCTGG...TGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCCCTGGCCTGGCCCCGTaGTCCAGGGGGAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSPGLAP*SRGSLL
Trigger: GAGGAGGCTCCCCCTGGAGCACGGGGCCAGGCCAGG...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000533112.5
CDS-3UTR CCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCACACGCCGACAGGCCTaGCCCTCGGGGCCCCGATCC +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFTRRQA*PSGPRS
Trigger: GGATCGGGGCCCCGAGGGCCAGGCCTGTCGGCGTGT...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCTCTCCTCGGGGCCCTaGCGGAAGGAGGTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: PSRYAAFWAHSWRANCLRLSSGP*RKEVER
Trigger: GCGCTCCACCTCCTTCCGCCAGGGCCCCGAGGAGAG...GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp AGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCAGCCAGAGAGCACCGTaGCACTGCCTGCGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RPAAMPSRHSSALSFGPVSQRAP*HCLRGP
Trigger: TGGGCCGCGCAGGCAGTGCCACGGTGCTCTCTGGCT...GACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGGAGGCTCCGCGGGCTaGCCCACCCTGCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLGGSAG*PTLLRV
Trigger: AACCCTGAGCAGGGTGGGTCAGCCCGCGGAGCCTCC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCTCTCCGCTGCCCGGATaGGACGGGCCTCCATCACCT +
Preference number: 4 (lower is better)
Translates to: ASFLASSPISSLVSRSCLSPLPG*DGPPSP
Trigger: AGGTGATGGAGGCCCGTCTCATCCGGGCAGCGGAGA...GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCCCTCGCCTCGTCTGTaGGGGCCAGCGAGCGGACCA +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPPSPRL*GPASGP
Trigger: TGGTCCGCTCGCTGGCCCGCACAGACGAGGCGAGGG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TCGGGGCCCTGGCGGAAGGAGGTGGAGCGCTGCAGGGTGCCACCCTTGTGCTGGAACCTTGGCGGTACATaGGCATGGCATCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SGPWRKEVERCRVPPLCWNLGGT*AWHRAG
Trigger: GCCTGCTCGATGCCATGCGCATGTACCGCCAAGGTT...CCAGCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGGGCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp TGGCCCGGCGCAGTGCCAGCTGCGAGCCGCCCTCCAGGCCCGCGATGGAGCCAGTTGTCCTCAAACTCCTaGTGGAGCCGTTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: WPGAVPAASRPPGPRWSQLSSNS*WSRFLV
Trigger: CACCAAGAAACGGCTCCAGCAGGAGTTTGAGGACAA...CTGGCTCCATCGCGGGCCTGGAGGGCGGCTCGCAGCTGGCACTGCGCCGGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GCTGCCAACCACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTTGTCGAGCCGGGAGGTaGTGCGGCGGGAACCGGGCG +
Preference number: 4 (lower is better)
Translates to: AANHSPGLCVSLRQLGLCCRAGR*CGGNRA
Trigger: CGCCCGGTTCCCGCCGCAGCACCTCCCGGCTCGACA...ACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTGGTTGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp GGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTGCCCGCATGGCCTGGCCTaGAGCAGCCCAGAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: GEELAVEAGRHALKALQCPHGLA*SSPEQG
Trigger: TCCTTGCTCTGGGCTGCTCCAGGCCAGGCCATGCGG...GCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 72 bp TCCCGCCGGTTCACCTGGTCGCTGAGGGTGGCGAGCTaGCCCTCCAGCTCCCGCTTCTCTCGCAGAACCTTC +
Preference number: 4 (lower is better)
Translates to: SRRFTWSLRVAS*PSSSRFSRRTF
Trigger: GAAGGTTCTGCGAGAGAAGCGGGAGCTGGAGGGCAAGCTCGCCACCCTCAGCGACCAGGTGAACCGGCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp TCGGGGCCCTGGCGGAAGGAGGTGGAGCGCTGCAGGGTGCCACCCTTGTGCTGGCCTTGTGCTGGTGCTTaGAGATGGCTGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: SGPWRKEVERCRVPPLCWPCAGA*RWLRTA
Trigger: AGCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGG...CCAGCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGGGCCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR TCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGGAGGCTCCGCGGGCTaGCCCACCCTGCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPGGSAG*PTLLRV
Trigger: AACCCTGAGCAGGGTGGGTCAGCCCGCGGAGCCTCC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGGAGGCTCCGCGGGCTaGCCCACCCTGCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTGGSAG*PTLLRV
Trigger: AACCCTGAGCAGGGTGGGTCAGCCCGCGGAGCCTCC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGCTCACTGCTGCTGCTaGCTCGGCGGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTAHCCC*LGGRRR
Trigger: CCGCCTCCTCCCGCCGAGTCAGCAGCAGCAGTGAGC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CACCAGGGAGACGAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCCAGCCGGTCACTGTTaGGCCGCAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HQGDEKGEELAVEAGRHAPAGHC*AAARSS
Trigger: AGAGGAACGAGCTGCGGCTCAACAGTGACCGGCTGG...GGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCTTGGTGCCCCACTTTaGTGCGGCCACCGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLLGAPL*CGHRSP
Trigger: CGGGCTCCGGTGGCCGCAGCAAAGTGGGGCACCAAG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCCAGTGGGCCGTCGTTaGAGCTCCAGCTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPPVGRR*SSSSRR
Trigger: CCTCCGGGAGCTGGAGCTGCAACGACGGCCCACTGG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCATCGGATGGCTCCCTaGGAGGTCCCTCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPHRMAP*EVPRRS
Trigger: GGAGCGGCGAGGGACCTCGCAGGGAGCCATCCGATG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCCATCGGATGGCTCCCTaGGAGGTCCCTCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSHRMAP*EVPRRS
Trigger: GGAGCGGCGAGGGACCTCGCAGGGAGCCATCCGATG...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CACCAGGGAGACGAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCAAGGAGGTGGAGCGCTaGAGGGTGCCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: HQGDEKGEELAVEAGRHAKEVER*RVPPLC
Trigger: GCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTT...GGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR GCA 90 bp CCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCAGAGGCCGGCCGCCATaGCCTCAAGGCACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PSRYAAFWAHSWRANCLRRGRPP*PQGTPV
Trigger: CACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCT...GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCAGGGGCACGTCGAGCTaGAGGAGCCCAGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPRGTSS*RSPASQ
Trigger: CTGCGAGGCTGGGCTCCTGCAGCTCGACGTGCCCCT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCCAGCCGTGCCAAGGTaGCCGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLPAVPR*PPGRTP
Trigger: GGGTGTTCTTCCGGGCGGGCACCTTGGCACGGCTGG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCTGCTCCTCCAGCCGTaGCAAGGTGCCCGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPLLLQP*QGARPE
Trigger: TTCCGGGCGGGCACCTTGGCACGGCTGGAGGAGCAG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CACCAGGGAGACGAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCGGCGGGCAAACTGCTTaGGCCCAGCCACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: HQGDEKGEELAVEAGRHAGGQTA*AQPLQV
Trigger: AACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCC...GGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR GCA 90 bp GCTGCCAACCACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTGTGGCACCGACAGACTaGGGGCCAGCGACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: AANHSPGLCVSLRQLGLCVAPTD*GPATGG
Trigger: GCCACCCGTCGCTGGCCCGCAGTCTGTCGGTGCCAC...ACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTGGTTGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTCGGGATCGGTGCCCTaGTCGAGGGATGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPSGSVP*SRDAWA
Trigger: GGCCCAGGCATCCCTCGACCAGGGCACCGATCCCGA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCTCCCGGAGGGTAGGTaGGGGCAGGGGCACCACGGG +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTLPEGR*GQGHHG
Trigger: CCCGTGGTGCCCCTGCCCCCACCTACCCTCCGGGAG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGACACGCCGACAGGCCTaGCCCTCGGGGCCCCGATCC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGTRRQA*PSGPRS
Trigger: GGATCGGGGCCCCGAGGGCCAGGCCTGTCGGCGTGT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCCACTCTCTCCTCGGGGCCCTaGCGGAAGGAGGTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: LKALQCTQFRACPISQATLSSGP*RKEVER
Trigger: GCGCTCCACCTCCTTCCGCCAGGGCCCCGAGGAGAG...AGTGGCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCCTCCAGGCCCGCGATaGAGCCAGAGAGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPPPGPR*SQRAPW
Trigger: CCACGGTGCTCTCTGGCTCCATCGCGGGCCTGGAGG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCAGCCCAGCCTCGCAGTaGTCTCCCGAGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSSPASQ*SPEGRS
Trigger: GGACCTGCCCTCGGGAGACCACTGCGAGGCTGGGCT...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCCGCGTCCAGCAGCTGGGAGGCGGACTCTCCTGTGTTACGCTCATCTGTCAGAGCCCAGCCTCGCAGTaGTCTCCCGAGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LRVQQLGGGLSCVTLICQSPASQ*SPEGRS
Trigger: GGACCTGCCCTCGGGAGACCACTGCGAGGCTGGGCT...CTGACAGATGAGCGTAACACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCAGCCCAGCCTCGCAGTaGTCTCCCGAGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPSPASQ*SPEGRS
Trigger: GGACCTGCCCTCGGGAGACCACTGCGAGGCTGGGCT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAGCCCAGCCTCGCAGTaGTCTCCCGAGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSPASQ*SPEGRS
Trigger: GGACCTGCCCTCGGGAGACCACTGCGAGGCTGGGCT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCATCCCGCCGGTTCACCTaGTCGCTGAGGGTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: SRYAAFWAHSWRANCLRPSRRFT*SLRVAS
Trigger: GCTCGCCACCCTCAGCGACCAGGTGAACCGGCGGGA...TGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCGGGCGTCGAGGTTTCTaGGGCGCTCTCATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFGRRGF*GALIPA
Trigger: AGCCGGGATGAGAGCGCCTCAGAAACCTCGACGCCC...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCGGTGGAGCTCTGTCCTaGGGGTGCCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPGGALS*GCHPHR
Trigger: CCTGTGGGGATGGCACCCTCAGGACAGAGCTCCACC...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGGCTCCGCGGGCTaGCCCACCCTGCTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGGGSAG*PTLLRV
Trigger: AACCCTGAGCAGGGTGGGTCAGCCCGCGGAGCCTCC...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTCTCCGCTGCCCGGATaGGACGGGCCTCCATCACCT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSSPLPG*DGPPSP
Trigger: AGGTGATGGAGGCCCGTCTCATCCGGGCAGCGGAGA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGGTGGAGGCCGGGCTaGAGTCGGAGCCCCACCGCT +
Preference number: 4 (lower is better)
Translates to: WEYRGLEVLSRGSCSSSDRWRPG*SRSPTA
Trigger: AGCGGTGGGGCTCCGACTTCAGCCCGGCCTCCACCG...GTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR TCA 90 bp AGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCAGGGGCAAGGGACTCCGAGGAGGCCCGGCTaGCCGGTGCAGAGACGGTGG +
Preference number: 4 (lower is better)
Translates to: RCCREGRAHHLTDQGQGTPRRPG*PVQRRW
Trigger: CCACCGTCTCTGCACCGGTCAGCCGGGCCTCCTCGG...AGTCCCTTGCCCCTGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCGAGGGGGCGGCAGAGTaGTCTGAGGGCGTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFEGAAE*SEGVEV
Trigger: AACCTCGACGCCCTCAGAGCACTCTGCCGCCCCCTC...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGCCCTGGTCGAGGGATaGCTGGGCCAGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSALVEG*LGQDAA
Trigger: TGCAGCATCCTGGCCCAGGCATCCCTCGACCAGGGC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCACAGCTCCTCCAGGCTaGAGCCCAGTAGGTACGCAG +
Preference number: 4 (lower is better)
Translates to: RPAAMPSRHSSALSFGPVTAPPG*SPVGTQ
Trigger: CTGCGTACCTACTGGGCTGCAGCCTGGAGGAGCTGT...GACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACCCCTCGCCTCGTCTGTaGGGGCCAGCGAGCGGACCA +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNPSPRL*GPASGP
Trigger: TGGTCCGCTCGCTGGCCCGCACAGACGAGGCGAGGG...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTCTGCTCCTCCAGCCGTaGCAAGGTGCCCGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTLLLQP*QGARPE
Trigger: TTCCGGGCGGGCACCTTGGCACGGCTGGAGGAGCAG...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCTGCTCCTCCAGCCGTaGCAAGGTGCCCGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRLLLQP*QGARPE
Trigger: TTCCGGGCGGGCACCTTGGCACGGCTGGAGGAGCAG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTCCAGCATGAGCTGGGCATCTGCCAGCAGGGCCTTGGTGCGCTTCAGGTCCTTGGGCCAGGTAGCCCCTaGAGGCTGCTTGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: VQHELGICQQGLGALQVLGPGSP*RLLGTG
Trigger: CCCTGTTCCAAGCAGCCTGCAGGGGCTACCTGGCCC...AAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAGATGCCCAGCTCATGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAGCCCGGAGCCTCTCTaGTGTCTCCGCGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSPEPL*CLRVQQ
Trigger: CTGCTGGACGCGGAGACAGCAGAGAGGCTCCGGGCT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCCCGTTGATCTCCGCTaGCCGGATGAGACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPPVDLR*PDETGL
Trigger: GAGGCCCGTCTCATCCGGGCAGCGGAGATCAACGGG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCAACTCTCCTCACTATCTaGCTGCAGGTCCCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: PAAMPSRHSSALSFGPVPTLLTI*LQVPEP
Trigger: CGGCTCGGGGACCTGCAGGCAGATAGTGAGGAGAGT...TGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCCGCTGGGCCTCCTCATaGGCCTGCGAGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSRWASS*ACESSL
Trigger: CAGTGAGCTCTCGCAGGCGCATGAGGAGGCCCAGCG...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTGCTCATGGCGGGCAAACTaGTTGCGCCCAGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: GEELAVEAGRHALKALQCSWRAN*LRPATA
Trigger: TGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGA...GCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCTCCCGGAGGGTAGGTaGGGGCAGGGGCACCACGGG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGLPEGR*GQGHHG
Trigger: CCCGTGGTGCCCCTGCCCCCACCTACCCTCCGGGAG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCTCTCCTCGGGGCCCTaGCGGAAGGAGGTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGLSSGP*RKEVER
Trigger: GCGCTCCACCTCCTTCCGCCAGGGCCCCGAGGAGAG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCAGCACCCCTCCAGGCCCGCGATaGAGCCAGAGAGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: AARMNQQAFCSSGEMPSTPPGPR*SQRAPW
Trigger: CCACGGTGCTCTCTGGCTCCATCGCGGGCCTGGAGG...GGTGCTGGGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCCTCCAGGCCCGCGATaGAGCCAGAGAGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPPPGPR*SQRAPW
Trigger: CCACGGTGCTCTCTGGCTCCATCGCGGGCCTGGAGG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTGCTACGCCCGTGTTTCTTaGTCAGGTGCGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GEELAVEAGRHALKALQCYARVS*SGAGPG
Trigger: TCCTGGCCCCGCACCTGACCAAGAAACACGGGCGTA...GCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp AGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCACTGCAGGTTACCTTTaGTGGCTCCCGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RPAAMPSRHSSALSFGPVTAGYL*WLPQPP
Trigger: TGGGGGCTGCGGGAGCCACCAAAGGTAACCTGCAGT...GACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588791.1
3UTR CAA 72 bp GCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTaGCGCCCAGCTTCAGCAGCTTCTTTGGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: AAFWAHSWRANC*RPASAASLVAP
Trigger: GGGAGCCACCAAAGAAGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 72 bp GTGGAGCGCTGCAGGGTGCCACCCTTGTGCTGGTGCTaGAAGATGGCTGAGGACAGCTCCTCCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VERCRVPPLCWC*KMAEDSSSRLQ
Trigger: CTGCAGCCTGGAGGAGCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCAGCGCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
3UTR CAA 72 bp TGGTCCAGCATGAGCTGGGCATCTGCCAGCAGGGCCTaGGTGCGCTTCAGGTCCTTCCGCAGCCGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WSSMSWASASRA*VRFRSFRSRFS
Trigger: AGAGAAGCGGCTGCGGAAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 72 bp TCGGCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTaGGTGTCCCGGAGCTGCCTCTGTAGCCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SASFLASSPISS*VSRSCLCSRLF
Trigger: GAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGTTCTGCTTGGCCAGTaGGCCGAACTTGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSVLLGQ*AELGCP
Trigger: CGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAAC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGGGCGTCGAGGTTTCTaGGGCGCTCTCATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPGRRGF*GALIPA
Trigger: AGCCGGGATGAGAGCGCCTCAGAAACCTCGACGCCC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCAGTGCTTGAAGATGGCTaGGGACAGCTCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PAAMPSRHSSALSFGPVPVLEDG*GQLLQA
Trigger: AGCCTGGAGGAGCTGTCCTCAGCCATCTTCAAGCAC...TGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGAGCGGACCAGGGACTaGTGGGAGGCCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTERTRD*WEAWST
Trigger: TGTGGACCAGGCCTCCCATCAGTCCCTGGTCCGCTC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCTCCGATGTCAGCTCTaGGATCCGGCTCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPLRCQL*DPALQP
Trigger: CGGCTGGAGAGCCGGATCTCAGAGCTGACATCGGAG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCTCCGCTGCCCGGATaGGACGGGCCTCCATCACCT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPSPLPG*DGPPSP
Trigger: AGGTGATGGAGGCCCGTCTCATCCGGGCAGCGGAGA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCCGCAGCCGCTTCTCTaGCTCAAAGTCCCGCCGGTT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLPQPLL*LKVPPV
Trigger: AACCGGCGGGACTTTGAGTCAGAGAAGCGGCTGCGG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCCAGTTCGTGCTTCTTaGGGCTCGCCTCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFPVRAS*GSPRPP
Trigger: AGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCAACGTGCTGGCTCCATaGAGTGCCAGGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFNVLAP*SARPPA
Trigger: GGCAGGTGGCCTGGCACTGCATGGAGCCAGCACGTT...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCAGAGGGAGGTCAACGTaGTGGCTCCATGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: ASFLASSPISSLVSRSCLRGRST*WLHAVP
Trigger: TGGCACTGCATGGAGCCAGCACGTTGACCTCCCTCT...GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCAGCACAGGGCCTTGGTaGCCCACTTTGCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSSTGPW*PTLLRP
Trigger: TGGCCGCAGCAAAGTGGGGCACCAAGGCCCTGTGCT...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTTGGCTGCCCGCTaGAGCACCGAGCCACGGAAG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLNLAAR*STEPRK
Trigger: CTTCCGTGGCTCGGTGCTGCAGCGGGCAGCCAAGTT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGGGGCTCGGGATCGGTaGCCTGGTCGAGGGATGCCT +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNGARDR*PGRGMP
Trigger: AGGCATCCCTCGACCAGGGCACCGATCCCGAGCCCC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGGGGCTCGGGATCGGTaGCCTGGTCGAGGGATGCCT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTGARDR*PGRGMP
Trigger: AGGCATCCCTCGACCAGGGCACCGATCCCGAGCCCC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCGGGCCAGGTCCTTGGTaGCTGCACCAGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPGPGPW*LHQAQQ
Trigger: TTGCTGAGCCTGGTGCAGGCACCAAGGACCTGGCCC...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCATGGAGCGCTGCAGGGTaGCACCCTTGTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SRYAAFWAHSWRANCLRPWSAAG*HPCAGA
Trigger: AGCACCAGCACAAGGGTGGCACCCTGCAGCGCTCCA...TGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTGGAGCGCTGCAGGGTaGCACCCTTGTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSWSAAG*HPCAGA
Trigger: AGCACCAGCACAAGGGTGGCACCCTGCAGCGCTCCA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCAAGGAGGTGGAGCGCTaGAGGGTGCCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPKEVER*RVPPLC
Trigger: GCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCCCTCGCCTCGTCTGTaGGGGCCAGCGAGCGGACCA +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGPSPRL*GPASGP
Trigger: TGGTCCGCTCGCTGGCCCGCACAGACGAGGCGAGGG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCCCGGCTCAGGCCCATaGAGCAGCTGCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLPGSGP*SSCSSP
Trigger: TGGAGAAGAGCAGCTGCTGCATGGGCCTGAGCCGGG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCCCGGCTCAGGCCCATaGAGCAGCTGCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPPGSGP*SSCSSP
Trigger: TGGAGAAGAGCAGCTGCTGCATGGGCCTGAGCCGGG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTCCTCACTATCTGCCTaGAGGTCCCCGAGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSSSLSA*RSPSRR
Trigger: ACGGCGGCTCGGGGACCTGCAGGCAGATAGTGAGGA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTCGTGGTTGCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSWLRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCCAGCAGGGCCTTGGTaGGCTTCAGGTCCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLPAGPW*ASGPSA
Trigger: TGCGGAAGGACCTGAAGCGCACCAAGGCCCTGCTGG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCCAGCAGGGCCTTGGTaGGCTTCAGGTCCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPPAGPW*ASGPSA
Trigger: TGCGGAAGGACCTGAAGCGCACCAAGGCCCTGCTGG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCTCTCCCCGCGCTCTaGCCCTCGCCAAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSLPAL*PSPRVV
Trigger: TACAACCCTTGGCGAGGGGCAGAGCGCGGGGAGAGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533112.5
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCGGCGGGCAAACTGCTTaGGCCCAGCCACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFGGQTA*AQPLQV
Trigger: AACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCC...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628822.2
CDS-3UTR GCA 90 bp ATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCGGCCCGGCTGACCGGTaGAGAGACGGTGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: ITVGVSRSGGVVERVVLIGPADR*RDGGGR
Trigger: CCGGCCTCCACCGTCTCTGCACCGGTCAGCCGGGCC...GATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR GCA 90 bp GTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGCGGAGCGGCGGATaGTGGCAGCTCGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: VAVTQITVGVSRSGGVVERRSGG*WQLAPG
Trigger: CCCCGGAGCGAGCTGCCAGCATCCGCCGCTCCGCCT...CTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp AGGGTGGCGAGCTTGCCCTCCAGCTCCCGCTTCTCTCGCAGAACCTTCTGCTTGCCTCGGCCTCCTTCCTaGCAAGCTCGCCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: RVASLPSSSRFSRRTFCLPRPPS*QARPSP
Trigger: AGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCGAGG...CAAGCAGAAGGTTCTGCGAGAGAAGCGGGAGCTGGAGGGCAAGCTCGCCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCCTCGGCCTCCTTCCTaGCAAGCTCGCCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLPRPPS*QARPSP
Trigger: AGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCGAGG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCCTCGGCCTCCTTCCTaGCAAGCTCGCCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFPRPPS*QARPSP
Trigger: AGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCGAGG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCAGGATGGCCCCATCGTaGTCCAGCTTCACACGCACC +
Preference number: 4 (lower is better)
Translates to: EKGEELAVEAGRHALKALRMAPS*SSFTRT
Trigger: GGTGCGTGTGAAGCTGGACCACGATGGGGCCATCCT...GAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTCCAGTGAGCCGAACTTaGCTGCCCGCTGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTPVSRT*LPAAAP
Trigger: CGGTGCTGCAGCGGGCAGCCAAGTTCGGCTCACTGG...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCCTCACCTCCACCTGTaGCGAGGGGGCGGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTPHLHL*RGGGRV
Trigger: CACTCTGCCGCCCCCTCGCCACAGGTGGAGGTGAGG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTGGTCGAGGGATGCCTaGGCCAGGATGCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFWSRDA*ARMLHQ
Trigger: CTGGTGCAGCATCCTGGCCCAGGCATCCCTCGACCA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCTCCCGGAGGGTAGGTaGGGGCAGGGGCACCACGGG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVLPEGR*GQGHHG
Trigger: CCCGTGGTGCCCCTGCCCCCACCTACCCTCCGGGAG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGGCCCCGATCCAGCATaGTTGTGCGCCGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTGPDPA*LCAAGR
Trigger: TCTCCCTGCGGCGCACAACCATGCTGGATCGGGGCC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCAGCAGCTTCTTTGGTaGCTCCCGCAGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLQQLLW*LPQPPG
Trigger: ACCTGGGGGCTGCGGGAGCCACCAAAGAAGCTGCTG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAGGTACGCAGCCTTCTaGGCCCACTCATGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLRYAAF*AHSWRA
Trigger: TGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCCTGGCGGAAGGAGGTaGAGCGCTGCAGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGPGGRR*SAAGCH
Trigger: GTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCACGAAGGTGCGCTCGTaGAAGAGCCTCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPTKVRS*KSLCSR
Trigger: CCGGCTGCAGAGGCTCTTCCACGAGCGCACCTTCGT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCCTCCAGGCCCGCGATaGAGCCAGAGAGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGPPGPR*SQRAPW
Trigger: CCACGGTGCTCTCTGGCTCCATCGCGGGCCTGGAGG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAGGTTTTCCGCATGCTaGTGGCCCGGCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLRFSAC*WPGAVP
Trigger: TGGCACTGCGCCGGGCCACCAGCATGCGGAAAACCT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGAGCCCAGCCTCGCAGTaGTCTCCCGAGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGSPASQ*SPEGRS
Trigger: GGACCTGCCCTCGGGAGACCACTGCGAGGCTGGGCT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AACTCCTGCTGGAGCCGTTTCTTGGTGAAGTCCACCTCCCGCACAGCCCGCTCAGGCGGTACATGCGCATaGCATCGAGCAGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: NSCWSRFLVKSTSRTARSGGTCA*HRAGGS
Trigger: GCTCCCGCCTGCTCGATGCCATGCGCATGTACCGCC...TGAGCGGGCTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCAGGAGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPSASSS*EADSPV
Trigger: CACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TCGGGGCCCTGGCGGAAGGAGGTGGAGCGCTGCAGGGTGCCACCCTTGTGCTGGAGAGACACAACCTTCTaGGTGAACCCTGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: SGPWRKEVERCRVPPLCWRDTTF*VNPAMS
Trigger: GGACATTGCAGGGTTCACCCAGAAGGTTGTGTCTCT...CCAGCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGGGCCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCAGCTGCGTGGCCGGGGTaGCACCGACAGACTGCGGGC +
Preference number: 4 (lower is better)
Translates to: YRGLEVLSRGSCSSSDRSAAWPG*HRQTAG
Trigger: GCCCGCAGTCTGTCGGTGCCACCCCGGCCACGCAGC...TGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR TCA 90 bp ATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGTCGGCTGCAATGCGCTaGTCCCGCTCCTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: MPSRHSSALSFGPVPSPRSAAMR*SRSSVS
Trigger: GCTGACTGAGGAGCGGGATCAGCGCATTGCAGCCGA...CCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGGCCCGAGTCCAGGATaGCGCTGCCCCGGTTACTAT +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRGPSPG*RCPGYY
Trigger: ATAGTAACCGGGGCAGCGTCATCCTGGACTCGGGCC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGTTCTGCTTGGCCAGTaGGCCGAACTTGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTVLLGQ*AELGCP
Trigger: CGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAAC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCCGCACGCTGTCCCCTaGCTGCCGGATCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTPHAVP*LPDHLH
Trigger: GTGGAGATGATCCGGCAGTCAGGGGACAGCGTGCGG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGAATGGGCTGCACCTTaGGCCGCACGCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNEWAAP*AARCPL
Trigger: CAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CACCAGGGAGACGAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCTACTGCCCAGGAGGATaGTTGACTGATCCTGACGGC +
Preference number: 4 (lower is better)
Translates to: HQGDEKGEELAVEAGRHAYCPGG*LTDPDG
Trigger: GCCGTCAGGATCAGTCAATCATCCTCCTGGGCAGTA...GGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTACACCTTGTTCCCGCTaGTGCCCGCGATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTTPCSR*CPRWWP
Trigger: TGGCCACCATCGCGGGCATCAGCGGGAACAAGGTGT...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGAGCGGACCAGGGACTaGTGGGAGGCCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNERTRD*WEAWST
Trigger: TGTGGACCAGGCCTCCCATCAGTCCCTGGTCCGCTC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAGCTCACTGCTGCTGCTaGCTCGGCGGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRAHCCC*LGGRRR
Trigger: CCGCCTCCTCCCGCCGAGTCAGCAGCAGCAGTGAGC...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCTCCGATGTCAGCTCTaGGATCCGGCTCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRLRCQL*DPALQP
Trigger: CGGCTGGAGAGCCGGATCTCAGAGCTGACATCGGAG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTCTCCGCTGCCCGGATaGGACGGGCCTCCATCACCT +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGSPLPG*DGPPSP
Trigger: AGGTGATGGAGGCCCGTCTCATCCGGGCAGCGGAGA...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCGGAGCCGTTTCTTGGTaGAGTCCACCTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFGAVSW*SPPPAQ
Trigger: CTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCC...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGCTGGCACTTCTTCTTaGGCTGCTGCAGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSAGTSS*AAAEPA
Trigger: AGCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGCTGGCACTTCTTCTTaGGCTGCTGCAGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLAGTSS*AAAEPA
Trigger: AGCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGGGCCAGGACATCAAAGCGGCGGCGGAACTCGGAAAACACCATGTGGTCAGGGTCAGGTGGTCCAGCATaGGCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GARTSKRRRNSENTMWSGSGGPA*AGHLPA
Trigger: TGCTGGCAGATGCCCAGCTCATGCTGGACCACCTGA...CCCTGACCACATGGTGTTTTCCGAGTTCCGCCGCCGCTTTGATGTCCTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGGTTCTCGGCTGCAATaGGCTGATCCCGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLGSRLQ*ADPAPQ
Trigger: CTGAGGAGCGGGATCAGCGCATTGCAGCCGAGAACC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCCAGTTCGTGCTTCTTaGGGCTCGCCTCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: MPSRHSSALSFGPVPSPRPVRAS*GSPRPP
Trigger: AGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGG...CCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCCAGTTCGTGCTTCTTaGGGCTCGCCTCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPPVRAS*GSPRPP
Trigger: AGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGCTGGCTCCATGCAGTaGCAGGCCACCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGAGSMQ*QATCHC
Trigger: GCAGTGGCAGGTGGCCTGGCACTGCATGGAGCCAGC...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCCGAGAGGGAAGGCACTaGTTCTCCTCCCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: EKGEELAVEAGRHALKALREGRH*FSSPNP
Trigger: AGGATTGGGGGAGGAGAAGCAGTGCCTTCCCTCTCG...GAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCGCTGGCGCAAGGTGTaGAGGACGCTGGACTCATTG +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFRWRKV*RTLDSL
Trigger: CAATGAGTCCAGCGTCCTGCACACCTTGCGCCAGCG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGAGGGGGCGGCAGAGTaGTCTGAGGGCGTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGEGAAE*SEGVEV
Trigger: AACCTCGACGCCCTCAGAGCACTCTGCCGCCCCCTC...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCCCTGGGCCAGGATGCTaGACCAGCTGTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSPGPGC*TSCPSR
Trigger: TCTAGAGGGACAGCTGGTGCAGCATCCTGGCCCAGG...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGCCCTGGTCGAGGGATaGCTGGGCCAGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNALVEG*LGQDAA
Trigger: TGCAGCATCCTGGCCCAGGCATCCCTCGACCAGGGC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGGGGGCTCGGGATCGGTaGCCTGGTCGAGGGATGCCT +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGGARDR*PGRGMP
Trigger: AGGCATCCCTCGACCAGGGCACCGATCCCGAGCCCC...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCCAGTGGGCCGTCGTTaGAGCTCCAGCTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGPVGRR*SSSSRR
Trigger: CCTCCGGGAGCTGGAGCTGCAACGACGGCCCACTGG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGGGCCAGGTCCTTGGTaGCTGCACCAGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPGPGPW*LHQAQQ
Trigger: TTGCTGAGCCTGGTGCAGGCACCAAGGACCTGGCCC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCAGCTCTGGAATGGGCTaGACCTTGAGCCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSSSGMG*TLSRTL
Trigger: CAGCGTGCGGCTCAAGGTGCAGCCCATTCCAGAGCT...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGGCAGCTGGTGGTCTTaGCACTGCCACTACTGCCCA +
Preference number: 4 (lower is better)
Translates to: SRYAAFWAHSWRANCLRPGSWWS*HCHYCP
Trigger: TGGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCC...TGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp TCGGGGCCCTGGCGGAAGGAGGTGGAGCGCTGCAGGGTGCCACCCTTGTGCTGGACTAAACTGCTGAGCTaGCTTCTGCTTTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SGPWRKEVERCRVPPLCWTKLLS*LLLFLR
Trigger: CCTGAGGAAAAGCAGAAGGCAGCTCAGCAGTTTAGT...CCAGCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGGGCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGTTCATCGGGGGAGATaGCCAGCACCTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSVHRGR*PAPSWP
Trigger: CGGCCATGAAGGTGCTGGGCATCTCCCCCGATGAAC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGTTCATCGGGGGAGATaGCCAGCACCTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLVHRGR*PAPSWP
Trigger: CGGCCATGAAGGTGCTGGGCATCTCCCCCGATGAAC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCGTTCATCGGGGGAGATaGCCAGCACCTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFVHRGR*PAPSWP
Trigger: CGGCCATGAAGGTGCTGGGCATCTCCCCCGATGAAC...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCACAGCTCCTCCAGGCTaGAGCCCAGTAGGTACGCAG +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSTAPPG*SPVGTQ
Trigger: CTGCGTACCTACTGGGCTGCAGCCTGGAGGAGCTGT...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCCCACCCTTGTGCTGGTaGTTGAAGATGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ASFLASSPISSLVSRSCLPPLCW*LKMAED
Trigger: GTCCTCAGCCATCTTCAAGCACCAGCACAAGGGTGG...GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CACCAGGGAGACGAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCCACCCTTGTGCTGGTaGTTGAAGATGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: HQGDEKGEELAVEAGRHAPPLCW*LKMAED
Trigger: GTCCTCAGCCATCTTCAAGCACCAGCACAAGGGTGG...GGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTAGAGGCCGGCCGCCATaGCCTCAAGGCACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGRGRPP*PQGTPV
Trigger: CACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCT...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCGGGCTGACCCACCCTaGTCAGGGTTCTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTRADPP*SGFWKP
Trigger: GGGCTTCCAGAACCCTGAGCAGGGTGGGTCAGCCCG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCGGGCTGACCCACCCTaGTCAGGGTTCTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGRADPP*SGFWKP
Trigger: GGGCTTCCAGAACCCTGAGCAGGGTGGGTCAGCCCG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGAGAGCACCGTGGCACTaGCTGCGCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRRAPWH*LRGPET
Trigger: TGTTTCTGGGCCGCGCAGGCAGTGCCACGGTGCTCT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCCCGGCTCAGGCCCATaGAGCAGCTGCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPPGSGP*SSCSSP
Trigger: TGGAGAAGAGCAGCTGCTGCATGGGCCTGAGCCGGG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCCAGCCGTGCCAAGGTaGCCGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGPAVPR*PPGRTP
Trigger: GGGTGTTCTTCCGGGCGGGCACCTTGGCACGGCTGG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCTGCTCCTCCAGCCGTaGCAAGGTGCCCGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: VDGSQNEPAGLLFIGGDALLLQP*QGARPE
Trigger: TTCCGGGCGGGCACCTTGGCACGGCTGGAGGAGCAG...GGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGGGCCAGGTAGCCCCTaGAGGCTGCTTGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNGPGSP*RLLGTG
Trigger: CCCTGTTCCAAGCAGCCTGCAGGGGCTACCTGGCCC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCCGCCTTCTCGAGCTTaGTCCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLPPSRA*SAAAGS
Trigger: AGATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCAGCCGCCGTTCCAGCTaGCTCTTGTTCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPSRRSS*LLFCCS
Trigger: GGAGCAGCAGAACAAGAGGCAGCTGGAACGGCGGCT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCTCACTATCTGCCTaGAGGTCCCCGAGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPSSLSA*RSPSRR
Trigger: ACGGCGGCTCGGGGACCTGCAGGCAGATAGTGAGGA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGCCAGGACATCAAAGCGGCGGCGGAACTCGGAAAACACCATGTGGTCAGGGTGCTGGCCCTCCAGGTaGAGCTTGGTGTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GARTSKRRRNSENTMWSGCWPSR*SLVSCS
Trigger: GCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCA...CCCTGACCACATGGTGTTTTCCGAGTTCCGCCGCCGCTTTGATGTCCTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCTCCAGTTCGTGGTTaGGGACCTGCTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSPVRG*GPAGPP
Trigger: TGGAGGGCCAGCAGGTCCGCAACCACGAACTGGAGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCGCTGGGCCTCCTCATaGGCCTGCGAGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGRWASS*ACESSL
Trigger: CAGTGAGCTCTCGCAGGCGCATGAGGAGGCCCAGCG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCTTGGTGCCCCACTTTaGTGCTCCCTGAGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRLGAPL*CSLSGR
Trigger: ACGGCCGCTCAGGGAGCAGCAAAGTGGGGCACCAAG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533112.5
CDS-3UTR GCA 90 bp TGGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGGGCTCTTCCGGCCGCTaGGGGACCGGGACACATCAG +
Preference number: 4 (lower is better)
Translates to: WPLCRCHSDNCGSIAVWRGSSGR*GTGTHQ
Trigger: CTGATGTGTCCCGGTCCCGCAGCGGCCGGAAGAGCC...CCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCGCCCATCTCCTCCTTaGTGTCCCGGAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPRPSPP*CPGAAS
Trigger: AGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCAGGATGGCCCCATCGTaGTCCAGCTTCACACGCACC +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFRMAPS*SSFTRT
Trigger: GGTGCGTGTGAAGCTGGACCACGATGGGGCCATCCT...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCAGGATGGCCCCATCGTaGTCCAGCTTCACACGCACC +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPRMAPS*SSFTRT
Trigger: GGTGCGTGTGAAGCTGGACCACGATGGGGCCATCCT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCCTTAGCACAGGGCCTTaGTGCCCCACTTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSLSTGP*CPTLLR
Trigger: CCGCAGCAAAGTGGGGCACCAAGGCCCTGTGCTAAG...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGGTCATCGCTGGAGCTaGCTGTACTTAGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSGHRWS*LYLGGP
Trigger: CGGGCCACCTAAGTACAGCCAGCTCCAGCGATGACC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCGGTCATCGCTGGAGCTaGCTGTACTTAGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPGHRWS*LYLGGP
Trigger: CGGGCCACCTAAGTACAGCCAGCTCCAGCGATGACC...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGGTCATCGCTGGAGCTaGCTGTACTTAGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLGHRWS*LYLGGP
Trigger: CGGGCCACCTAAGTACAGCCAGCTCCAGCGATGACC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCCAGTGAGCCGAACTTaGCTGCCCGCTGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGPVSRT*LPAAAP
Trigger: CGGTGCTGCAGCGGGCAGCCAAGTTCGGCTCACTGG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCCAGTGAGCCGAACTTaGCTGCCCGCTGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGPVSRT*LPAAAP
Trigger: CGGTGCTGCAGCGGGCAGCCAAGTTCGGCTCACTGG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGGTCGAGGGATGCCTaGGCCAGGATGCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRWSRDA*ARMLHQ
Trigger: CTGGTGCAGCATCCTGGCCCAGGCATCCCTCGACCA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGCCCCGATCCAGCATaGTTGTGCGCCGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGGPDPA*LCAAGR
Trigger: TCTCCCTGCGGCGCACAACCATGCTGGATCGGGGCC...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGGCCCCGATCCAGCATaGTTGTGCGCCGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNGPDPA*LCAAGR
Trigger: TCTCCCTGCGGCGCACAACCATGCTGGATCGGGGCC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGACACGCCGACAGGCCTaGCCCTCGGGGCCCCGATCC +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWTRRQA*PSGPRS
Trigger: GGATCGGGGCCCCGAGGGCCAGGCCTGTCGGCGTGT...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRYAAFWAHSWRANCLRPATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...TGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp CCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCGAGGCTGAGGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PPCPQGTPVHSVSGLSHLEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCCTCAGCCTC...GAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp TGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCGAGGCTGAGGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: CPQGTPVHSVSGLSHLPGEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCCTCAGCCTC...GCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTGTGGCTTCACTGGCTaGGCGCCGAGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTCGFTG*APSHTQ
Trigger: CTGCGTGTGGCTCGGCGCCCAGCCAGTGAAGCCACA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGCAAACTGCTTGCGCCCAGCCACTGCAGGTTACCTTTGGTGGCTCCCGCAGCGCCAAGTGGTTGAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GQTACAQPLQVTFGGSRSAKWLR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTCAACCACTTGGC...GCTGCGGGAGCCACCAAAGGTAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR CCA 90 bp CTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCCACTCAGCAGCTTCTTTGGTaGCTCCCGCAGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LKALQCTQFRACPISQATQQLLW*LPQPPG
Trigger: ACCTGGGGGCTGCGGGAGCCACCAAAGAAGCTGCTG...AGTGGCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp CTCCGCGTCCAGCAGCTGGGAGGCGGACTCTCCTGTGTTACGCTCATCTGTCAGTTCTGGGCCCACTCATaGCGGGCAAACTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LRVQQLGGGLSCVTLICQFWAHS*RANCLR
Trigger: GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAA...CTGACAGATGAGCGTAACACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTTCTGGGCCCACTCATaGCGGGCAAACTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLFWAHS*RANCLR
Trigger: GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTTTCTGGGCCCACTCATaGCGGGCAAACTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: AAMPSRHSSALSFGPVPSFWAHS*RANCLR
Trigger: GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAA...AGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp GCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCAGCACCAGGTACGCAGCCTTCTaGGCCCACTCATGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: AARMNQQAFCSSGEMPSTRYAAF*AHSWRA
Trigger: TGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCT...GGTGCTGGGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp GTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCCTGGCGGAAGGAGGTaGAGCGCTGCAGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VDGSQNEPAGLLFIGGDAPGGRR*SAAGCH
Trigger: GTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGG...GGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCTCTCCTCGGGGCCCTaGCGGAAGGAGGTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSLSSGP*RKEVER
Trigger: GCGCTCCACCTCCTTCCGCCAGGGCCCCGAGGAGAG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTCCCTGCTCAGGGTTCTaGAAGCCCGGGGTGTCGACA +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTPCSGF*KPGVST
Trigger: TGTCGACACCCCGGGCTTCCAGAACCCTGAGCAGGG...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCCCTGCTCAGGGTTCTaGAAGCCCGGGGTGTCGACA +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPPCSGF*KPGVST
Trigger: TGTCGACACCCCGGGCTTCCAGAACCCTGAGCAGGG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
62% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCACGAAGGTGCGCTCGTaGAAGAGCCTCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPTKVRS*KSLCSR
Trigger: CCGGCTGCAGAGGCTCTTCCACGAGCGCACCTTCGT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGCGGTACATGCGCATaGCATCGAGCAGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGGGTCA*HRAGGS
Trigger: GCTCCCGCCTGCTCGATGCCATGCGCATGTACCGCC...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GSIAVWRCCREGRAHHLTSASSS*EADSPV
Trigger: CACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...GGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTSASSS*EADSPV
Trigger: CACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTCCCGCCGGTTCACCTaGTCGCTGAGGGTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGSRRFT*SLRVAS
Trigger: GCTCGCCACCCTCAGCGACCAGGTGAACCGGCGGGA...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCTGCCAGCAGGGCCTTaGTGCGCTTCAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRLPAGP*CASGPS
Trigger: GGAAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTGGTCCAGCATGAGCTaGGCATCTGCCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTWSSMS*ASASRA
Trigger: GGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTGGTCCAGCATGAGCTaGGCATCTGCCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPWSSMS*ASASRA
Trigger: GGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTACAGACTGGGCACCATaGGGAGTCCCACAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTTDWAP*GVPQGH
Trigger: GTGCCCCTGTGGGACTCCCCATGGTGCCCAGTCTGT...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTTCCCTGGGGCCCACATaGGCCTTCCTAGGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLCVAVTQITVGVSRSGGSLGPT*AFLGGL
Trigger: GAGGCCCCCTAGGAAGGCCCATGTGGGCCCCAGGGA...ACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636100.1
3UTR CAA 72 bp GCGGACCTGCTGGCCCTCCAGGTGCAGCTTGGTGTCTaGCAGCTCAGCCGTCAGTCGCTGGCACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ADLLALQVQLGV*QLSRQSLALLL
Trigger: AAGAAGAAGTGCCAGCGACTGACGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTCATTCTTCTCACGCTaGAGGCGGCTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFSFFSR*RRLSCS
Trigger: GGAGCAGCTGAGCCGCCTTCAGCGTGAGAAGAATGA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTCGGCTGCAATGCGCTaGTCCCGCTCCTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTSAAMR*SRSSVS
Trigger: GCTGACTGAGGAGCGGGATCAGCGCATTGCAGCCGA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGGACGCTGGACTCATTaGGGTACACCAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSGRWTH*GTPVRP
Trigger: TGGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGAGGAGCGGTTCAGGTTaGAGAAGCCACGTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRRSGSG*RSHVAG
Trigger: GCCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTAGCCGCTGGCCACCTTaGTGGGGATGGGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTSRWPP*WGWGWR
Trigger: TCTCCAACCCCATCCCCATCAAGGTGGCCAGCGGCT...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGCCCGAGTCCAGGATaGCGCTGCCCCGGTTACTAT +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGGPSPG*RCPGYY
Trigger: ATAGTAACCGGGGCAGCGTCATCCTGGACTCGGGCC...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGGCCCGAGTCCAGGATaGCGCTGCCCCGGTTACTAT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTGPSPG*RCPGYY
Trigger: ATAGTAACCGGGGCAGCGTCATCCTGGACTCGGGCC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTACCCTCCTCACCCTTaGGGTCATCGCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPYPPHP*GHRWSW
Trigger: CCAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCCGCACGCTGTCCCCTaGCTGCCGGATCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGPHAVP*LPDHLH
Trigger: GTGGAGATGATCCGGCAGTCAGGGGACAGCGTGCGG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTACACCTTGTTCCCGCTaGTGCCCGCGATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTTPCSR*CPRWWP
Trigger: TGGCCACCATCGCGGGCATCAGCGGGAACAAGGTGT...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCAGCACCTGTCTGAATGGAGGCTaGGGCCACCTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AARMNQQAFCSSGEMPSTCLNGG*GHLASL
Trigger: CAAGCTGGCCAGGTGGCCTCAGCCTCCATTCAGACA...GGTGCTGGGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTGTCTGAATGGAGGCTaGGGCCACCTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTCLNGG*GHLASL
Trigger: CAAGCTGGCCAGGTGGCCTCAGCCTCCATTCAGACA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGGGTGGAGCTCTGTCCTaGGGGTGCCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWGGALS*GCHPHR
Trigger: CCTGTGGGGATGGCACCCTCAGGACAGAGCTCCACC...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AACTCCTGCTGGAGCCGTTTCTTGGTGAAGTCCACCTCCCGCACAGCCCGCTCAGGGAGACGAGAAGGGTaGAGAGCTCGCTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: NSCWSRFLVKSTSRTARSGRREG*RARCRG
Trigger: GCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCC...TGAGCGGGCTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCAGGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGGGAGACGAGAAGGGTaGAGAGCTCGCTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRGRREG*RARCRG
Trigger: GCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAGTGCTGGCTGGACTTaGGAGCCCTATTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSAGWT*EPYSPG
Trigger: CCCTGGTGAATAGGGCTCTCAAGTCCAGCCAGCACT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACGAGCGGACCAGGGACTaGTGGGAGGCCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: WEYRGLEVLSRGSCSSSDERTRD*WEAWST
Trigger: TGTGGACCAGGCCTCCCATCAGTCCCTGGTCCGCTC...GTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAGCTCACTGCTGCTGCTaGCTCGGCGGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSAHCCC*LGGRRR
Trigger: CCGCCTCCTCCCGCCGAGTCAGCAGCAGCAGTGAGC...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCCAGCCGGTCACTGTTaGGCCGCAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTPAGHC*AAARSS
Trigger: AGAGGAACGAGCTGCGGCTCAACAGTGACCGGCTGG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGGAGCCGTTTCTTGGTaGAGTCCACCTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTGAVSW*SPPPAQ
Trigger: CTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGGGTTCACCTGGTCGCTaGGGGTGGCGAGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGGSPGR*GWRACP
Trigger: AGGGCAAGCTCGCCACCCTCAGCGACCAGGTGAACC...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCCGCAGCCGCTTCTCTaGCTCAAAGTCCCGCCGGTT +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGPQPLL*LKVPPV
Trigger: AACCGGCGGGACTTTGAGTCAGAGAAGCGGCTGCGG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCTCCAGCTGGTTCTTaGGCTGGGCAATCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: AAMPSRHSSALSFGPVPSPPAGS*AGQSLA
Trigger: AGCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGG...AGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCACTTTGCTGCTCCCTaGGCGGCCGTTTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGHFAAP*AAVSSS
Trigger: GCTGGAGGAAACGGCCGCTCAGGGAGCAGCAAAGTG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533112.5
CDS-3UTR TCA 90 bp ACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGGGTAGGAGTGACGGCTaGCGGAGCGGACGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TQITVGVSRSGGVVERVVGRSDG*RSGRWS
Trigger: GCTCCAGCGTCCGCTCCGTCAGCCGTCACTCCTACC...CACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR GCA 90 bp GAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: EKGEELAVEAGRHALKALLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...GAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTGCCGTATCTTAGCTTCCTaGCTGCTCACCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: GEELAVEAGRHALKALQCRILAS*LLTRDL
Trigger: CAAGTCCCTGGTGAGCAGGCAGGAAGCTAAGATACG...GCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTAACGTGCTGGCTCCATaGAGTGCCAGGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGNVLAP*SARPPA
Trigger: GGCAGGTGGCCTGGCACTGCATGGAGCCAGCACGTT...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTGCATAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFCIDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTATGCA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGACTTGGTGCCCCACTTTaGTGCGGCCACCGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRLGAPL*CGHRSP
Trigger: CGGGCTCCGGTGGCCGCAGCAAAGTGGGGCACCAAG...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTAGCACAGGGCCTTGGTaGCCCACTTTGCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGSTGPW*PTLLRP
Trigger: TGGCCGCAGCAAAGTGGGGCACCAAGGCCCTGTGCT...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACAGCACAGGGCCTTGGTaGCCCACTTTGCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSTGPW*PTLLRP
Trigger: TGGCCGCAGCAAAGTGGGGCACCAAGGCCCTGTGCT...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTAACTTGGCTGCCCGCTaGAGCACCGAGCCACGGAAG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGNLAAR*STEPRK
Trigger: CTTCCGTGGCTCGGTGCTGCAGCGGGCAGCCAAGTT...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCCTGGGCCAGGATGCTaGACCAGCTGTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRPGPGC*TSCPSR
Trigger: TCTAGAGGGACAGCTGGTGCAGCATCCTGGCCCAGG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTCCTGGGCCAGGATGCTaGACCAGCTGTCCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTPGPGC*TSCPSR
Trigger: TCTAGAGGGACAGCTGGTGCAGCATCCTGGCCCAGG...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTAGCTCTGGAATGGGCTaGACCTTGAGCCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSSGMG*TLSRTL
Trigger: CAGCGTGCGGCTCAAGGTGCAGCCCATTCCAGAGCT...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCATCGGATGGCTCCCTaGGAGGTCCCTCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPHRMAP*EVPRRS
Trigger: GGAGCGGCGAGGGACCTCGCAGGGAGCCATCCGATG...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGACATCGGATGGCTCCCTaGGAGGTCCCTCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRHRMAP*EVPRRS
Trigger: GGAGCGGCGAGGGACCTCGCAGGGAGCCATCCGATG...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGGCAGCTGGTGGTCTTaGCACTGCCACTACTGCCCA +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRGSWWS*HCHYCP
Trigger: TGGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCATGGTGGCCAGGTACTaGACCAGATGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPMVARY*TRCWQL
Trigger: CAGCTGCCAGCATCTGGTGCAGTACCTGGCCACCAT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGGTTCATCGGGGGAGATaGCCAGCACCTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: MPSRHSSALSFGPVPSPRVHRGR*PAPSWP
Trigger: CGGCCATGAAGGTGCTGGGCATCTCCCCCGATGAAC...CCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGGCGGGCAAACTGCTTaGGCCCAGCTTCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTGGQTA*AQLQQL
Trigger: AAGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR GCA 90 bp GCTGCCAACCACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTGGCGGGCAAACTGCTTaGGCCCAGCTTCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: AANHSPGLCVSLRQLGLCGGQTA*AQLQQL
Trigger: AAGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCC...ACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTGGTTGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCATGGCGGGCAAACTaGTTGCGCCCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSWRAN*LRPASA
Trigger: TGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR GCA 90 bp CACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTGTCGCTGTCACAGCTCCTCCAGGCTaGAGCCCAGTAGGTACGCAG +
Preference number: 4 (lower is better)
Translates to: HSPGLCVSLRQLGLCVAVTAPPG*SPVGTQ
Trigger: CTGCGTACCTACTGGGCTGCAGCCTGGAGGAGCTGT...GACAGCGACACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp TACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCCACTAGGGTGCCACCCTTGTaGTGGTGCTTGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: YAAFWAHSWRANCLRPATRVPPL*WCLKMA
Trigger: AGCCATCTTCAAGCACCAGCACAAGGGTGGCACCCT...AGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTGGAGCGCTGCAGGGTaGCACCCTTGTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTWSAAG*HPCAGA
Trigger: AGCACCAGCACAAGGGTGGCACCCTGCAGCGCTCCA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGAGAGGCCGGCCGCCATaGCCTCAAGGCACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWRGRPP*PQGTPV
Trigger: CACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTCGGGCTGACCCACCCTaGTCAGGGTTCTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GLCVAVTQITVGVSRSGGRADPP*SGFWKP
Trigger: GGGCTTCCAGAACCCTGAGCAGGGTGGGTCAGCCCG...ACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GATCTTTCTCTTCTTGAAGTGCTGGCGGGCCAGGTAGCCCCTGCAGGCTGCTTGCACCGTGGCACTGCCTaGGCGGCCCAGAAACAGGTT +
Preference number: 4 (lower is better)
Translates to: DLSLLEVLAGQVAPAGCLHRGTA*AAQKQV
Trigger: AACCTGTTTCTGGGCCGCGCAGGCAGTGCCACGGTG...CAAGCAGCCTGCAGGGGCTACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGAGAGCACCGTGGCACTaGCTGCGCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGRAPWH*LRGPET
Trigger: TGTTTCTGGGCCGCGCAGGCAGTGCCACGGTGCTCT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTAGGGGCACGTCGAGCTaGAGGAGCCCAGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: HSDNCGSIAVWRCCREGRRGTSS*RSPASQ
Trigger: CTGCGAGGCTGGGCTCCTGCAGCTCGACGTGCCCCT...ACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGAGGGGCACGTCGAGCTaGAGGAGCCCAGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVRGTSS*RSPASQ
Trigger: CTGCGAGGCTGGGCTCCTGCAGCTCGACGTGCCCCT...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACCTTGGCGGTACATaGGCATGGCATCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLNLGGT*AWHRAG
Trigger: GCCTGCTCGATGCCATGCGCATGTACCGCCAAGGTT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TATCTTTCCAACTCCTGCACGAAGGTGCGCTCGTGGAAGAGCCTCTGCAGCCGGCCCGGCTCAGGCCCATaGAGCAGCTGCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: YLSNSCTKVRSWKSLCSRPGSGP*SSCSSP
Trigger: TGGAGAAGAGCAGCTGCTGCATGGGCCTGAGCCGGG...CCGGCTGCAGAGGCTCTTCCACGAGCGCACCTTCGTGCAGGAGTTGGAAAGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGACCAGCCGTGCCAAGGTaGCCGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRPAVPR*PPGRTP
Trigger: GGGTGTTCTTCCGGGCGGGCACCTTGGCACGGCTGG...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCGTTTGTTCATCCCGCTaGTCCTCCAGCCGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFVCSSR*SSSRAK
Trigger: CTTGGCACGGCTGGAGGAGCAGCGGGATGAACAAAC...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCCGCCTTCTCGAGCTTaGTCCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRPPSRA*SAAAGS
Trigger: AGATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCAGCACCAGCCGCCGTTCCAGCTaGCTCTTGTTCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AARMNQQAFCSSGEMPSTSRRSS*LLFCCS
Trigger: GGAGCAGCAGAACAAGAGGCAGCTGGAACGGCGGCT...GGTGCTGGGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTCGTGGTTGCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGSWLRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGA...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGTCGTGGTTGCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWSWLRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGA...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGGACGGGTGGCTGTACTaGGAGCAGGCCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: WPLCRCHSDNCGSIAVWRDGWLY*EQASLR
Trigger: CCTGAGCGAGGCCTGCTCGCAGTACAGCCACCCGTC...CCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR GCA 90 bp GGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGGGAGGCTCATCCACTaGCGAGGCAGAGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: GLCVAVTQITVGVSRSGGGRLIH*RGRAAW
Trigger: CCACGCAGCTCTGCCTCGGCAGTGGATGAGCCTCCC...ACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCGCCCATCTCCTCCTTaGTGTCCCGGAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGRPSPP*CPGAAS
Trigger: AGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCCTCGGCCTCCTTCCTaGCAAGCTCGCCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGPRPPS*QARPSP
Trigger: AGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCGAGG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCCAAGAACCAGCAGGCTaGGGCCAGCATACGTGTGCA +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSQEPAG*GQHTCA
Trigger: TGCACACGTATGCTGGCCCCAGCCTGCTGGTTCTTG...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCTCACCTCCACCTGTaGCGAGGGGGCGGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPPHLHL*RGGGRV
Trigger: CACTCTGCCGCCCCCTCGCCACAGGTGGAGGTGAGG...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTGGTCGAGGGATGCCTaGGCCAGGATGCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNWSRDA*ARMLHQ
Trigger: CTGGTGCAGCATCCTGGCCCAGGCATCCCTCGACCA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAATCGGGATCGGTGCCCTaGTCGAGGGATGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKSGSVP*SRDAWA
Trigger: GGCCCAGGCATCCCTCGACCAGGGCACCGATCCCGA...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAGCCAAAGTCTCCAGTaGGCCGTCGTTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSQSLQ*AVVAAP
Trigger: TGGAGCTGCAACGACGGCCCACTGGAGACTTTGGCT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCGATGCTGGCAGCTGGTaGTCTTGCCACTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPDAGSW*SCHCHY
Trigger: GTAGTGGCAGTGGCAAGACCACCAGCTGCCAGCATC...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSRERI*EKRVAL
Trigger: CAATGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCCACTGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LKALQCTQFRACPISQATATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...AGTGGCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCAGGGGCAAGGGACTTGTGGCTTCACTGGCTaGGCGCCGAGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: RCCREGRAHHLTDQGQGTCGFTG*APSHTQ
Trigger: CTGCGTGTGGCTCGGCGCCCAGCCAGTGAAGCCACA...AGTCCCTTGCCCCTGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCTGTGGCTTCACTGGCTaGGCGCCGAGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: VDGSQNEPAGLLFIGGDACGFTG*APSHTQ
Trigger: CTGCGTGTGGCTCGGCGCCCAGCCAGTGAAGCCACA...GGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGCCAAGTGGTTGAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLAKWLR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTCAACCACTTGGC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTCTTCAGCAGCTTCTTTaGTGGCTCCCGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTLQQLL*WLPQPP
Trigger: TGGGGGCTGCGGGAGCCACCAAAGAAGCTGCTGAAG...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGAGGTACGCAGCCTTCTaGGCCCACTCATGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGRYAAF*AHSWRA
Trigger: TGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACAGGTACGCAGCCTTCTaGGCCCACTCATGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNRYAAF*AHSWRA
Trigger: TGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCT...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCCTGGCGGAAGGAGGTaGAGCGCTGCAGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSPGGRR*SAAGCH
Trigger: GTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCCCTGCTCAGGGTTCTaGAAGCCCGGGGTGTCGACA +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGPCSGF*KPGVST
Trigger: TGTCGACACCCCGGGCTTCCAGAACCCTGAGCAGGG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTAGCCAGAGAGCACCGTaGCACTGCCTGCGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSQRAP*HCLRGP
Trigger: TGGGCCGCGCAGGCAGTGCCACGGTGCTCTCTGGCT...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGCCAGAGAGCACCGTaGCACTGCCTGCGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRSQRAP*HCLRGP
Trigger: TGGGCCGCGCAGGCAGTGCCACGGTGCTCTCTGGCT...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTTTTCCGCATGCTGGTaGCCCGGCGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNFSACW*PGAVPA
Trigger: AGCTGGCACTGCGCCGGGCCACCAGCATGCGGAAAA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTACGCCCGTGTTTCTTaGTCAGGTGCGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRYARVS*SGAGPG
Trigger: TCCTGGCCCCGCACCTGACCAAGAAACACGGGCGTA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGGTGGCGAGCTTGCCCTCCAGCTCCCGCTTCTCTCGCAGAACCTTCTGCTTGCCCCTGCAGGCTGCTTaGAACAGGGTTAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RVASLPSSSRFSRRTFCLPLQAA*NRVRFL
Trigger: CAGGAACCTAACCCTGTTCCAAGCAGCCTGCAGGGG...CAAGCAGAAGGTTCTGCGAGAGAAGCGGGAGCTGGAGGGCAAGCTCGCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCCCCTGCAGGCTGCTTaGAACAGGGTTAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPPLQAA*NRVRFL
Trigger: CAGGAACCTAACCCTGTTCCAAGCAGCCTGCAGGGG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCCCCTGCAGGCTGCTTaGAACAGGGTTAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLPLQAA*NRVRFL
Trigger: CAGGAACCTAACCCTGTTCCAAGCAGCCTGCAGGGG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCTGGTTGCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GSIAVWRCCREGRAHHLTWLRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCA...GGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTTCTTCTCCAGTTCGTaGTTGCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSFFSSS*LRTCWP
Trigger: GGGCCAGCAGGTCCGCAACCACGAACTGGAGAAGAA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATCCCGCCGGTTCACCTaGTCGCTGAGGGTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRSRRFT*SLRVAS
Trigger: GCTCGCCACCCTCAGCGACCAGGTGAACCGGCGGGA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTGGTCCAGCATGAGCTaGGCATCTGCCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNWSSMS*ASASRA
Trigger: GGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTTTCTGGGCACAGACTaGGCACCATGGGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSFLGTD*APWGVP
Trigger: TGGGACTCCCCATGGTGCCCAGTCTGTGCCCAGAAA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp TGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGGGCCAGCGACGGGTaGCTGTACTGCGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: CHSDNCGSIAVWRCCREGRASDG*LYCEQA
Trigger: GGCCTGCTCGCAGTACAGCCACCCGTCGCTGGCCCG...ACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp TGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGACGAGGCAGAGCTGCGTaGCCGGGGTGGCACCGACAG +
Preference number: 4 (lower is better)
Translates to: CRCHSDNCGSIAVWRCCRRGRAA*PGWHRQ
Trigger: CTGTCGGTGCCACCCCGGCCACGCAGCTCTGCCTCG...TCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp TGGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGAGCGGACGCTGGAGCTaGGAGGCTCATCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: WPLCRCHSDNCGSIAVWRSGRWS*EAHPLP
Trigger: CGGCAGTGGATGAGCCTCCCAGCTCCAGCGTCCGCT...CCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp CACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTGTCGCTGTCAGACGGTCGAGCCGCTaGATGACGACGAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: HSPGLCVSLRQLGLCVAVRRSSR*MTTRRT
Trigger: AGTCCTCCTCGTCGTCATCCAGCGGCTCGACCGTCT...GACAGCGACACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
3UTR CAA 72 bp CACTCGCCACCTGCATCATCATCATCCACTTCCCCGTaGATCTCCGCTGCCCGGATGAGACGGGCCTCCATC +
Preference number: 4 (lower is better)
Translates to: HSPPASSSSTSP*ISAARMRRASI
Trigger: GATGGAGGCCCGTCTCATCCGGGCAGCGGAGATCAACGGGGAAGTGGATGATGATGATGCAGGTGGCGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTCATTCTTCTCACGCTaGAGGCGGCTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSFFSR*RRLSCS
Trigger: GGAGCAGCTGAGCCGCCTTCAGCGTGAGAAGAATGA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTGGAGATCATTTATCTaGGCCAGGTCCCGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFWRSFI*ARSREA
Trigger: GGCTTCCCGGGACCTGGCTCAGATAAATGATCTCCA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGGTCCCCGATGCGCTTaGATGCCAACTTTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSGPRCA*MPTLGQ
Trigger: CTGACCTAAAGTTGGCATTCAAGCGCATCGGGGACC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTTGACAACCAGGACTTaGCCCCGTCAACACGGTCCT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLLTTRT*PRQHGP
Trigger: AGGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGAGTTGACTGGCCAGTaGGAAGCCGTCCCTATGGAC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRELTGQ*EAVPMD
Trigger: GTCCATAGGGACGGCTTCTCACTGGCCAGTCAACTC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCCCGCCGACAACCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPPADNP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGTTGTCGGCGGG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCCCCGCCGACAACCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSPADNP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGTTGTCGGCGGG...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCCGAAGCTCTGCCGCTaGCATCCGCTCCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPPKLCR*HPLLFL
Trigger: GAGAAAAAGGAGCGGATGTCAGCGGCAGAGCTTCGG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTAGGAGCGGTTCAGGTTaGAGAAGCCACGTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTRSGSG*RSHVAG
Trigger: GCCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCT...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGAGCCGCTGGCCACCTTaGTGGGGATGGGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWSRWPP*WGWGWR
Trigger: TCTCCAACCCCATCCCCATCAAGGTGGCCAGCGGCT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTACCCTCCTCACCCTTaGGGTCATCGCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGYPPHP*GHRWSW
Trigger: CCAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTA...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGGAATGGGCTGCACCTTaGGCCGCACGCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLEWAAP*AARCPL
Trigger: CAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTC...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGAATGGGCTGCACCTTaGGCCGCACGCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLEWAAP*AARCPL
Trigger: CAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCGCCCAGGAGGATGATTaGCTGATCCTGACGGCTCAT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFAQEDD*LILTAH
Trigger: ATGAGCCGTCAGGATCAGTCAATCATCCTCCTGGGC...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGACACCTTGTTCCCGCTaGTGCCCGCGATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGTPCSR*CPRWWP
Trigger: TGGCCACCATCGCGGGCATCAGCGGGAACAAGGTGT...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTCCAGAAGCATTGTCTaGATGGAGGCTGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFSRSIV*MEAEAT
Trigger: GGTGGCCTCAGCCTCCATTCAGACAATGCTTCTGGA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCTCCAGAAGCATTGTCTaGATGGAGGCTGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: PPCPQGTPVHSVSGLSHLSRSIV*MEAEAT
Trigger: GGTGGCCTCAGCCTCCATTCAGACAATGCTTCTGGA...GAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR TCA 90 bp AGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCCGGTAGTAGAAGACGTTaGATGTGGCTTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: RYAAFWAHSWRANCLRPAGSRRR*MWLHWL
Trigger: CAGCCAGTGAAGCCACATTCAACGTCTTCTACTACC...GGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR TCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGGTGGAGCTCTGTCCTaGGGGTGCCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVGGALS*GCHPHR
Trigger: CCTGTGGGGATGGCACCCTCAGGACAGAGCTCCACC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAGGTGGAGCTCTGTCCTaGGGGTGCCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRGGALS*GCHPHR
Trigger: CCTGTGGGGATGGCACCCTCAGGACAGAGCTCCACC...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGTGCTTGAAGATGGCTaGGGACAGCTCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRVLEDG*GQLLQA
Trigger: AGCCTGGAGGAGCTGTCCTCAGCCATCTTCAAGCAC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCGAGCGGACCAGGGACTaGTGGGAGGCCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSERTRD*WEAWST
Trigger: TGTGGACCAGGCCTCCCATCAGTCCCTGGTCCGCTC...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGAGCGGACCAGGGACTaGTGGGAGGCCTGGTCCACA +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVERTRD*WEAWST
Trigger: TGTGGACCAGGCCTCCCATCAGTCCCTGGTCCGCTC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGCTCACTGCTGCTGCTaGCTCGGCGGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKAHCCC*LGGRRR
Trigger: CCGCCTCCTCCCGCCGAGTCAGCAGCAGCAGTGAGC...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGCCCCCAGGTGGTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCCTCCGATGTCAGCTCTaGGATCCGGCTCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SPQVVDGSQNEPAGLLFILRCQL*DPALQP
Trigger: CGGCTGGAGAGCCGGATCTCAGAGCTGACATCGGAG...GATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTACCACCTGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp ACGTCATCCTCATCCACATCCAGGATGGCCCCATCGTGGTCCAGCTTCACACGCGGAGCCGTTTCTTGGTaGAGTCCACCTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: TSSSSTSRMAPSWSSFTRGAVSW*SPPPAQ
Trigger: CTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCC...GCGTGTGAAGCTGGACCACGATGGGGCCATCCTGGATGTGGATGAGGATGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGCTGGCACTTCTTCTTaGGCTGCTGCAGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNAGTSS*AAAEPA
Trigger: AGCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGTTGCTGCTTCAGGCTaGAAGCCTCAGCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTVAASG*KPQRGA
Trigger: TGCTCCTCGCTGAGGCTTTCAGCCTGAAGCAGCAAC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCGGTTCACCTGGTCGCTaGGGGTGGCGAGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSGSPGR*GWRACP
Trigger: AGGGCAAGCTCGCCACCCTCAGCGACCAGGTGAACC...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTCAGGTGGTCCAGCATaGGCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGSGGPA*AGHLPA
Trigger: TGCTGGCAGATGCCCAGCTCATGCTGGACCACCTGA...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTCCTCCAGCTGGTTCTTaGGCTGGGCAATCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTPPAGS*AGQSLA
Trigger: AGCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGG...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCGCACAGGTGAACTCTaGCTCCTCCAGCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLRTGEL*LLQLVL
Trigger: AAGAACCAGCTGGAGGAGTCAGAGTTCACCTGTGCG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCGCTCAGGGAGGTaGAGAGCGAATCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: HSDNCGSIAVWRCCREGRARSGR*RANPRP
Trigger: GGGACGCGGATTCGCTCTTCACCTCCCTGAGCGAGC...ACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR TCA 90 bp CAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCGGTCGAGCCGCTGGATaGCGACGAGGAGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: QITVGVSRSGGVVERVVLGRAAG*RRGGLR
Trigger: TCTGAGTCCTCCTCGTCGTCATCCAGCGGCTCGACC...GAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGTTCTCGGCTGCAATaGGCTGATCCCGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGGSRLQ*ADPAPQ
Trigger: CTGAGGAGCGGGATCAGCGCATTGCAGCCGAGAACC...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCCTCCCGGTTCTCGGCTaGAATGCGCTGATCCCGCTC +
Preference number: 4 (lower is better)
Translates to: QITVGVSRSGGVVERVVLLPVLG*NALIPL
Trigger: GAGCGGGATCAGCGCATTGCAGCCGAGAACCGGGAG...GAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCTCCCGGTTCTCGGCTaGAATGCGCTGATCCCGCTC +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWLPVLG*NALIPL
Trigger: GAGCGGGATCAGCGCATTGCAGCCGAGAACCGGGAG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCTCCCGGTTCTCGGCTaGAATGCGCTGATCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGLPVLG*NALIPL
Trigger: GAGCGGGATCAGCGCATTGCAGCCGAGAACCGGGAG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCCACTTTGGTGTCCCGGAGCTaGCTCTGTAGCCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LKALQCTQFRACPISQATLVSRS*LCSRLF
Trigger: GAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAA...AGTGGCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTTGGTGTCCCGGAGCTaGCTCTGTAGCCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTLVSRS*LCSRLF
Trigger: GAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTTGGTGTCCCGGAGCTaGCTCTGTAGCCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPLVSRS*LCSRLF
Trigger: GAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTCCATCTCCAGTTCGTaGTTCTTGCGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSISSS*FLRLAS
Trigger: CGAGGCGAGCCGCAAGAAGCACGAACTGGAGATGGA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCCACTCCCCTGGGCTATaGGTTAGTCTCCGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSHSPGL*VSLRQL
Trigger: AAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCATCAGGGTGTTTCCCATaGAGATCAGCAGTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SRYAAFWAHSWRANCLRPSGCFP*RSAVGW
Trigger: CCACCCGACTGCTGATCTGCATGGGAAACACCCTGA...TGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTCAGGGTGTTTCCCATaGAGATCAGCAGTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFSGCFP*RSAVGW
Trigger: CCACCCGACTGCTGATCTGCATGGGAAACACCCTGA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGCTGGCTCCATGCAGTaGCAGGCCACCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPAGSMQ*QATCHC
Trigger: GCAGTGGCAGGTGGCCTGGCACTGCATGGAGCCAGC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGAACGTGCTGGCTCCATaGAGTGCCAGGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGNVLAP*SARPPA
Trigger: GGCAGGTGGCCTGGCACTGCATGGAGCCAGCACGTT...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCAGAGGGAGGTCAACGTaGTGGCTCCATGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPRGRST*WLHAVP
Trigger: TGGCACTGCATGGAGCCAGCACGTTGACCTCCCTCT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCACCAGCGTCTCCAGCTaGACAGAGAAAGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLTSVSS*TEKGLL
Trigger: GAGCAGTCCTTTCTCTGTGCAGCTGGAGACGCTGGT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCGCTGGCGCAAGGTGTaGAGGACGCTGGACTCATTG +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGRWRKV*RTLDSL
Trigger: CAATGAGTCCAGCGTCCTGCACACCTTGCGCCAGCG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGGAGGGGGCGGCAGAGTaGTCTGAGGGCGTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLEGAAE*SEGVEV
Trigger: AACCTCGACGCCCTCAGAGCACTCTGCCGCCCCCTC...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGAGGGGGCGGCAGAGTaGTCTGAGGGCGTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLEGAAE*SEGVEV
Trigger: AACCTCGACGCCCTCAGAGCACTCTGCCGCCCCCTC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTATGCCTGGGCCAGGATaGTGCACCAGCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTMPGPG*CTSCPS
Trigger: AGAGGGACAGCTGGTGCAGCATCCTGGCCCAGGCAT...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGATCCAGCATGGTTGTaGGCCGCAGGGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPDPAWL*AAGRSQ
Trigger: TTGGCTTCTCCCTGCGGCGCACAACCATGCTGGATC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGATCCAGCATGGTTGTaGGCCGCAGGGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRDPAWL*AAGRSQ
Trigger: TTGGCTTCTCCCTGCGGCGCACAACCATGCTGGATC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACAGCTCTGGAATGGGCTaGACCTTGAGCCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSSGMG*TLSRTL
Trigger: CAGCGTGCGGCTCAAGGTGCAGCCCATTCCAGAGCT...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAGGTACTGCACCAGATaGTGGCAGCTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLRYCTR*WQLVVL
Trigger: CAAGACCACCAGCTGCCAGCATCTGGTGCAGTACCT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGGCGGGCAAACTGCTTaGGCCCAGCTTCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGGGQTA*AQLQQL
Trigger: AAGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCC...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGCGGGCAAACTGCTTaGGCCCAGCTTCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGGGQTA*AQLQQL
Trigger: AAGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCC...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCAGGGTGCCACCCTTGTaGTGGTGCTTGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSRVPPL*WCLKMA
Trigger: AGCCATCTTCAAGCACCAGCACAAGGGTGGCACCCT...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAGGGTGCCACCCTTGTaGTGGTGCTTGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLRVPPL*WCLKMA
Trigger: AGCCATCTTCAAGCACCAGCACAAGGGTGGCACCCT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCAGCACCTTTGGAGCGCTGCAGGGTaGCACCCTTGTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SQNEPAGLLFIGGDAQHLWSAAG*HPCAGA
Trigger: AGCACCAGCACAAGGGTGGCACCCTGCAGCGCTCCA...AAGGTGCTGGGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCTCAAGGCACTCCAGTaGACTCAGTTTCGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PPCPQGTPVHSVSGLSHLLKALQ*TQFRAC
Trigger: ACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG...GAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGAGAGGCCGGCCGCCATaGCCTCAAGGCACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVRGRPP*PQGTPV
Trigger: CACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCT...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAGGCCGGCCGCCATaGCCTCAAGGCACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRRGRPP*PQGTPV
Trigger: CACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCT...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGACGGGCTGACCCACCCTaGTCAGGGTTCTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRRADPP*SGFWKP
Trigger: GGGCTTCCAGAACCCTGAGCAGGGTGGGTCAGCCCG...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCGGGCTGACCCACCCTaGTCAGGGTTCTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSRADPP*SGFWKP
Trigger: GGGCTTCCAGAACCCTGAGCAGGGTGGGTCAGCCCG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTGTGGTTTGCTGCTGTaGAGAAGGGGGCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSCGLLL*RRGLWP
Trigger: AGGCCAAAGCCCCCTTCTGCACAGCAGCAAACCACA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTGTGGTTTGCTGCTGTaGAGAAGGGGGCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLCGLLL*RRGLWP
Trigger: AGGCCAAAGCCCCCTTCTGCACAGCAGCAAACCACA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCACCGTGGCACTGCCTaGGCGGCCCAGAAACAGGTT +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGHRGTA*AAQKQV
Trigger: AACCTGTTTCTGGGCCGCGCAGGCAGTGCCACGGTG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCAGCAGCTCCTCCACTaGCCGCCTTTCATCCACCAC +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGQQLLH*PPFIHH
Trigger: GTGGTGGATGAAAGGCGGGCAGTGGAGGAGCTGCTG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTGTCGCTGTCGGCCCATGCAGCAGCTaGTCTTCTCCAGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: HSPGLCVSLRQLGLCVAVGPCSS*SSPDPS
Trigger: GCTTGGATCTGGAGAAGAGCAGCTGCTGCATGGGCC...GACAGCGACACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCACTGCTCCTCCAGCCGTaGCAAGGTGCCCGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSLLLQP*QGARPE
Trigger: TTCCGGGCGGGCACCTTGGCACGGCTGGAGGAGCAG...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGTTTGTTCATCCCGCTaGTCCTCCAGCCGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPVCSSR*SSSRAK
Trigger: CTTGGCACGGCTGGAGGAGCAGCGGGATGAACAAAC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGGGCCAGGTAGCCCCTaGAGGCTGCTTGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLGPGSP*RLLGTG
Trigger: CCCTGTTCCAAGCAGCCTGCAGGGGCTACCTGGCCC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TTCCGGATCTGCTCCTCTGACAGCTGTACTTCGATGAGGGGCCTCACTGTGGTAAGCCCGGAGCCTCTCTaGTGTCTCCGCGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FRICSSDSCTSMRGLTVVSPEPL*CLRVQQ
Trigger: CTGCTGGACGCGGAGACAGCAGAGAGGCTCCGGGCT...TACCACAGTGAGGCCCCTCATCGAAGTACAGCTGTCAGAGGAGCAGATCCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTAGCCCGGAGCCTCTCTaGTGTCTCCGCGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSPEPL*CLRVQQ
Trigger: CTGCTGGACGCGGAGACAGCAGAGAGGCTCCGGGCT...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGACCCGTTGATCTCCGCTaGCCGGATGAGACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRPVDLR*PDETGL
Trigger: GAGGCCCGTCTCATCCGGGCAGCGGAGATCAACGGG...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTCCCGTTGATCTCCGCTaGCCGGATGAGACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLPVDLR*PDETGL
Trigger: GAGGCCCGTCTCATCCGGGCAGCGGAGATCAACGGG...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACAGCCGCCGTTCCAGCTaGCTCTTGTTCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSRRSS*LLFCCS
Trigger: GGAGCAGCAGAACAAGAGGCAGCTGGAACGGCGGCT...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACTCCTCACTATCTGCCTaGAGGTCCCCGAGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: WEYRGLEVLSRGSCSSSDSSLSA*RSPSRR
Trigger: ACGGCGGCTCGGGGACCTGCAGGCAGATAGTGAGGA...GTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGTCCTCACTATCTGCCTaGAGGTCCCCGAGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWSSLSA*RSPSRR
Trigger: ACGGCGGCTCGGGGACCTGCAGGCAGATAGTGAGGA...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGACTCTCCTCACTATCTaGCTGCAGGTCCCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGTLLTI*LQVPEP
Trigger: CGGCTCGGGGACCTGCAGGCAGATAGTGAGGAGAGT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTACTCTCCTCACTATCTaGCTGCAGGTCCCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGTLLTI*LQVPEP
Trigger: CGGCTCGGGGACCTGCAGGCAGATAGTGAGGAGAGT...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTCGTGGTTGCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSWLRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCGCTGGGCCTCCTCATaGGCCTGCGAGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPRWASS*ACESSL
Trigger: CAGTGAGCTCTCGCAGGCGCATGAGGAGGCCCAGCG...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCTGGATGGTCCCTGCCTaGTCATCCAGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CPQGTPVHSVSGLSHLPGWMVPA*SSSSSS
Trigger: GGAAGAAGAGCTGGATGAGCAGGCAGGGACCATCCA...GCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCATCTGGATGGTCCCTaGCTGCTCATCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLHLDGP*LLIQLF
Trigger: GAAGAGCTGGATGAGCAGGCAGGGACCATCCAGATG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCATTTCCACATGGGTCTaGTCCAGCCCTCGTCCGCAA +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLISTWV*SSPRPQ
Trigger: TTGCGGACGAGGGCTGGAGCAGACCCATGTGGAAAT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGCTCCTCGGACTTCCTaGCTGGGCATGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AVTQITVGVSRSGGVVERAPRTS*LGMAPP
Trigger: GGGAGGAGCCATGCCCAGGCAGGAAGTCCGAGGAGC...CCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR GCA 90 bp CACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTGTCGCTGTCTTCCTCGACGGCCGGTaGGTCTGCCCAGTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HSPGLCVSLRQLGLCVAVFLDGR*VCPVSS
Trigger: TGAAGAAACTGGGCAGACGCACCGGCCGTCGAGGAA...GACAGCGACACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp GTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCGCCCATCTCCTCCTTaGTGTCCCGGAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: VDGSQNEPAGLLFIGGDARPSPP*CPGAAS
Trigger: AGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCG...GGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCCTCGGCCTCCTTCCTaGCAAGCTCGCCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGPRPPS*QARPSP
Trigger: AGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCGAGG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTCAAGAACCAGCAGGCTaGGGCCAGCATACGTGTGCA +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTQEPAG*GQHTCA
Trigger: TGCACACGTATGCTGGCCCCAGCCTGCTGGTTCTTG...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCAAGAACCAGCAGGCTaGGGCCAGCATACGTGTGCA +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRQEPAG*GQHTCA
Trigger: TGCACACGTATGCTGGCCCCAGCCTGCTGGTTCTTG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTTTCCAGGCGCGTCTTaGATTCACGCTTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPFPGAS*IHAWRS
Trigger: GCTCCTCCAAGCGTGAATCCAAGACGCGCCTGGAAA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTTTCCAGGCGCGTCTTaGATTCACGCTTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSFPGAS*IHAWRS
Trigger: GCTCCTCCAAGCGTGAATCCAAGACGCGCCTGGAAA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTCATCCCGGCTACGCTaGGAGAAGGAAAAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFSSRLR*EKEKRL
Trigger: CAAGCGCTTTTCCTTCTCCCAGCGTAGCCGGGATGA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGAGCCAAAGTCTCCAGTaGGCCGTCGTTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRSQSLQ*AVVAAP
Trigger: TGGAGCTGCAACGACGGCCCACTGGAGACTTTGGCT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGGGCCCCGATCCAGCATaGTTGTGCGCCGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLGPDPA*LCAAGR
Trigger: TCTCCCTGCGGCGCACAACCATGCTGGATCGGGGCC...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGAGCTCGCTGAGCTCTaGAATGGGCTGCACCTTGAG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTELAEL*NGLHLE
Trigger: CTCAAGGTGCAGCCCATTCCAGAGCTCAGCGAGCTC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGAGCTCGCTGAGCTCTaGAATGGGCTGCACCTTGAG +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRELAEL*NGLHLE
Trigger: CTCAAGGTGCAGCCCATTCCAGAGCTCAGCGAGCTC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTGTTTTCGCATCGGATaGCTCCCTGCGAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTCFRIG*LPARSL
Trigger: GAGGGACCTCGCAGGGAGCCATCCGATGCGAAAACA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRSRERI*EKRVAL
Trigger: CAATGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGAGGCTGAGGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCCTCAGCCTC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGAAGCATTGTCTGAATaGAGGCTGAGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSEALSE*RLRPPG
Trigger: GCCAGGTGGCCTCAGCCTCCATTCAGACAATGCTTC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGAAGCATTGTCTGAATaGAGGCTGAGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: SRYAAFWAHSWRANCLRPEALSE*RLRPPG
Trigger: GCCAGGTGGCCTCAGCCTCCATTCAGACAATGCTTC...TGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATGTGGCTTCACTGGCTaGGCGCCGAGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRCGFTG*APSHTQ
Trigger: CTGCGTGTGGCTCGGCGCCCAGCCAGTGAAGCCACA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTGTGGCTTCACTGGCTaGGCGCCGAGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVCGFTG*APSHTQ
Trigger: CTGCGTGTGGCTCGGCGCCCAGCCAGTGAAGCCACA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCCCTCAGGCTTGGCCAGTaGCACAATCCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: RYAAFWAHSWRANCLRPALRLGQ*HNPKHI
Trigger: AATGTGTTTGGGATTGTGCCACTGGCCAAGCCTGAG...GGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCTCTCCTCGGGGCCCTaGCGGAAGGAGGTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKLSSGP*RKEVER
Trigger: GCGCTCCACCTCCTTCCGCCAGGGCCCCGAGGAGAG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGCCAGGACATCAAAGCGGCGGCGGAACTCGGAAAACACCATGTGGTCAGGGTTGGTGCCATGGCTGTaGCCCAGGAGAAAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: GARTSKRRRNSENTMWSGLVPWL*PRRKWC
Trigger: ACACCACTTTCTCCTGGGCCACAGCCATGGCACCAA...CCCTGACCACATGGTGTTTTCCGAGTTCCGCCGCCGCTTTGATGTCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTTGGTGCCATGGCTGTaGCCCAGGAGAAAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPLVPWL*PRRKWC
Trigger: ACACCACTTTCTCCTGGGCCACAGCCATGGCACCAA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAAGCCAGAGAGCACCGTaGCACTGCCTGCGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSSQRAP*HCLRGP
Trigger: TGGGCCGCGCAGGCAGTGCCACGGTGCTCTCTGGCT...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCACCTCCAGGCCCGCGATaGAGCCAGAGAGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSPPGPR*SQRAPW
Trigger: CCACGGTGCTCTCTGGCTCCATCGCGGGCCTGGAGG...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTAGGTTTTCCGCATGCTaGTGGCCCGGCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GLCVAVTQITVGVSRSGGRFSAC*WPGAVP
Trigger: TGGCACTGCGCCGGGCCACCAGCATGCGGAAAACCT...ACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGAGGTTTTCCGCATGCTaGTGGCCCGGCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWRFSAC*WPGAVP
Trigger: TGGCACTGCGCCGGGCCACCAGCATGCGGAAAACCT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCGGCGGTACATGCGCATaGCATCGAGCAGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSGGTCA*HRAGGS
Trigger: GCTCCCGCCTGCTCGATGCCATGCGCATGTACCGCC...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTTACGCCCGTGTTTCTTGGTCAGGTGCGGGGCCAGGACATCAAAGCGGCGGCGTTGCTCCGCAGCTGCTaGATCTCCTCGTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VTPVFLGQVRGQDIKAAALLRSC*ISSSLF
Trigger: GAACAAAGACGAGGAGATCCAGCAGCTGCGGAGCAA...CGCCGCCGCTTTGATGTCCTGGCCCCGCACCTGACCAAGAAACACGGGCGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACCCTCCAGGTGCAGCTTaGTGTCTTGCAGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNPPGAA*CLAAQP
Trigger: CGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGG...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCCTCCAGGTGCAGCTTaGTGTCTTGCAGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTPPGAA*CLAAQP
Trigger: CGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTTCTTCTCCAGTTCGTaGTTGCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPFFSSS*LRTCWP
Trigger: GGGCCAGCAGGTCCGCAACCACGAACTGGAGAAGAA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGCCTGTTCCAGCATCTaGATGGTCCCTGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPACSSI*MVPACS
Trigger: TGAGCAGGCAGGGACCATCCAGATGCTGGAACAGGC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATCCCGCCGGTTCACCTaGTCGCTGAGGGTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSSRRFT*SLRVAS
Trigger: GCTCGCCACCCTCAGCGACCAGGTGAACCGGCGGGA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTCCCGCCGGTTCACCTaGTCGCTGAGGGTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWSRRFT*SLRVAS
Trigger: GCTCGCCACCCTCAGCGACCAGGTGAACCGGCGGGA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCAGCCACTGCAGGTTTaGTGGCTCCCGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVQPLQV*WLPQPP
Trigger: TGGGGGCTGCGGGAGCCACCAAACCTGCAGTGGCTG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000628822.2
CDS-3UTR CCA 90 bp GCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGCTCGGACTTCCTGCCTaGGCATGGCTCCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AVTQITVGVSRSGGVVERLGLPA*AWLLPG
Trigger: CCCAGGGAGGAGCCATGCCCAGGCAGGAAGTCCGAG...CCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp GCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGTGGAGCAGCTGTGGCTaGAGACGGTCGAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: AVTQITVGVSRSGGVVERWSSCG*RRSSRW
Trigger: CCAGCGGCTCGACCGTCTCCAGCCACAGCTGCTCCA...CCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp ACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCACACTGGAGCAGCTGTaGCTGGAGACGGTCGAGCCG +
Preference number: 4 (lower is better)
Translates to: TVGVSRSGGVVERVVLIITLEQL*LETVEP
Trigger: CGGCTCGACCGTCTCCAGCCACAGCTGCTCCAGTGT...GATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
3UTR CAA 72 bp TGCCTCTGCCCACCACCCCCAGGACCAATCCAGACTTaGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGC +
Preference number: 4 (lower is better)
Translates to: CLCPPPPGPIQT*PEPEGTGRKTG
Trigger: GCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAGTCTGGATTGGTCCTGGGGGTGGTGGGCAGAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CAA 72 bp GCCAGGTACTGCACCAGATGCTGGCAGCTGGTGGTCTaGCCACTGCCACTACTGCCCAGGAGGATGATTGAC +
Preference number: 4 (lower is better)
Translates to: ARYCTRCWQLVV*PLPLLPRRMID
Trigger: GTCAATCATCCTCCTGGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCCAGCATCTGGTGCAGTACCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 72 bp AGGCGGCTCAGCTGCTCCTCCAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGCAGGTGCAGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: RRLSCSSSAVLA*AMSSICRCRSS
Trigger: CGAAGACCTGCACCTGCAGATTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGAGCAGCTGAGCCGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 72 bp TCCTCCTTGGTGTCCCGGAGCTGCCTCTGTAGCCGCTaGTTCTGTTCCTTCTCCCGGTTCTCGGCTGCAATG +
Preference number: 4 (lower is better)
Translates to: SSLVSRSCLCSR*FCSFSRFSAAM
Trigger: CATTGCAGCCGAGAACCGGGAGAAGGAACAGAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAAGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 72 bp TCCAGGCTTTCTAGATCCATCTCCAGTTCGTGCTTCTaGCGGCTCGCCTCGGCCTCCTTCCTGGCAAGCTCG +
Preference number: 4 (lower is better)
Translates to: SRLSRSISSSCF*RLASASFLASS
Trigger: CGAGCTTGCCAGGAAGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGGAGATGGATCTAGAAAGCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGGTCCCCGATGCGCTTaGATGCCAACTTTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTGPRCA*MPTLGQ
Trigger: CTGACCTAAAGTTGGCATTCAAGCGCATCGGGGACC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTGACAACCAGGACTTaGCCCCGTCAACACGGTCCT +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRLTTRT*PRQHGP
Trigger: AGGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTTGACAACCAGGACTTaGCCCCGTCAACACGGTCCT +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTLTTRT*PRQHGP
Trigger: AGGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GCTGCCAACCACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTTTGACAACCAGGACTTaGCCCCGTCAACACGGTCCT +
Preference number: 4 (lower is better)
Translates to: AANHSPGLCVSLRQLGLCLTTRT*PRQHGP
Trigger: AGGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAA...ACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTGGTTGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000636100.1
CDS-3UTR TCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCCGAAGCTCTGCCGCTaGCATCCGCTCCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGPKLCR*HPLLFL
Trigger: GAGAAAAAGGAGCGGATGTCAGCGGCAGAGCTTCGG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCCGAAGCTCTGCCGCTaGCATCCGCTCCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTPKLCR*HPLLFL
Trigger: GAGAAAAAGGAGCGGATGTCAGCGGCAGAGCTTCGG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGTTCTGCTTGGCCAGTaGGCCGAACTTGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVVLLGQ*AELGCP
Trigger: CGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAAC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGAATGGGCTGCACCTTaGGCCGCACGCTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWEWAAP*AARCPL
Trigger: CAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTC...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGCCCAGGAGGATGATTaGCTGATCCTGACGGCTCAT +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTAQEDD*LILTAH
Trigger: ATGAGCCGTCAGGATCAGTCAATCATCCTCCTGGGC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTACACCTTGTTCCCGCTaGTGCCCGCGATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLTPCSR*CPRWWP
Trigger: TGGCCACCATCGCGGGCATCAGCGGGAACAAGGTGT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGTGTCTGAATGGAGGCTaGGGCCACCTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWCLNGG*GHLASL
Trigger: CAAGCTGGCCAGGTGGCCTCAGCCTCCATTCAGACA...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGTGGAGCTCTGTCCTaGGGGTGCCATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWGGALS*GCHPHR
Trigger: CCTGTGGGGATGGCACCCTCAGGACAGAGCTCCACC...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AACAGGGTTAGGTTCCTGCTGGTTTGTTCATCCCGCTGCTCCTCCAGCCGTGCCGTGCTTGAAGATGGCTaGGGACAGCTCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: NRVRFLLVCSSRCSSSRAVLEDG*GQLLQA
Trigger: AGCCTGGAGGAGCTGTCCTCAGCCATCTTCAAGCAC...GGCACGGCTGGAGGAGCAGCGGGATGAACAAACCAGCAGGAACCTAACCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCCTTGTGCTGGTGCTTaGAGATGGCTGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPPCAGA*RWLRTA
Trigger: AGCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGCCCCCAGGTGGTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGAGACGAGAAGGGTaGAGAGCTCGCTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: SPQVVDGSQNEPAGLLFIGRREG*RARCRG
Trigger: GCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCC...GATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTACCACCTGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR TCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGAGTGCTGGCTGGACTTaGGAGCCCTATTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGSAGWT*EPYSPG
Trigger: CCCTGGTGAATAGGGCTCTCAAGTCCAGCCAGCACT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCACAGTGACTTCTTTTTaGCAGCCGCCATGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLTVTSF*QPPCLW
Trigger: CCACAGGCATGGCGGCTGTCAAAAAGAAGTCACTGT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCACAGTGACTTCTTTTTaGCAGCCGCCATGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFTVTSF*QPPCLW
Trigger: CCACAGGCATGGCGGCTGTCAAAAAGAAGTCACTGT...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRGSFSS*SAGGPG
Trigger: ACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCCAGCCGGTCACTGTTaGGCCGCAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVPAGHC*AAARSS
Trigger: AGAGGAACGAGCTGCGGCTCAACAGTGACCGGCTGG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATCTCCGCTGCCCGGATaGGACGGGCCTCCATCACCT +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSSPLPG*DGPPSP
Trigger: AGGTGATGGAGGCCCGTCTCATCCGGGCAGCGGAGA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGGCTGGCACTTCTTCTTaGGCTGCTGCAGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: WPLCRCHSDNCGSIAVWRAGTSS*AAAEPA
Trigger: AGCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGC...CCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGTTGCTGCTTCAGGCTaGAAGCCTCAGCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGVAASG*KPQRGA
Trigger: TGCTCCTCGCTGAGGCTTTCAGCCTGAAGCAGCAAC...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTCTTCTTCCTGATCCTTaGCTTTGGCCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTLLPDP*LWPPGP
Trigger: GGGACCTGGAGGCCAAAGTCAAGGATCAGGAAGAAG...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCTTCTTCCTGATCCTTaGCTTTGGCCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRLLPDP*LWPPGP
Trigger: GGGACCTGGAGGCCAAAGTCAAGGATCAGGAAGAAG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCATGTTTTAACTTCTTCTaGCACGACTGCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SRYAAFWAHSWRANCLRPCFNFF*HDCRAS
Trigger: GGAGGCCCGGCAGTCGTGTCAGAAGAAGTTAAAACA...TGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCCTCCAGCTGGTTCTTaGGCTGGGCAATCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTPPAGS*AGQSLA
Trigger: AGCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCGCACAGGTGAACTCTaGCTCCTCCAGCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRRTGEL*LLQLVL
Trigger: AAGAACCAGCTGGAGGAGTCAGAGTTCACCTGTGCG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGGGCCAGAGACCAGGGTaGTGCCCTCACGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLGQRPG*CPHGPH
Trigger: ATGGGGACCGTGAGGGCATCACCCTGGTCTCTGGCC...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCCACCCTTGCTAACCTaGATCACAGTCCCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRPPLLT*ITVPRL
Trigger: GAGCCTAGGGACTGTGATTCAGGTTAGCAAGGGTGG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp ACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGGGCTCAGGGAAGGGCTaGGTGTCCTGGAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: TQITVGVSRSGGVVERVVGSGKG*VSWRGC
Trigger: ACAGCCTCTCCAGGACACTCAGCCCTTCCCTGAGCC...CACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR GCA 90 bp GGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGGTTCTCGGCTGCAATaGGCTGATCCCGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLCVAVTQITVGVSRSGGGSRLQ*ADPAPQ
Trigger: CTGAGGAGCGGGATCAGCGCATTGCAGCCGAGAACC...ACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGGGTTCTCGGCTGCAATaGGCTGATCCCGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWGSRLQ*ADPAPQ
Trigger: CTGAGGAGCGGGATCAGCGCATTGCAGCCGAGAACC...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCACTCCCCTGGGCTATaGGTTAGTCTCCGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPHSPGL*VSLRQL
Trigger: AAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTAACGTGCTGGCTCCATaGAGTGCCAGGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLNVLAP*SARPPA
Trigger: GGCAGGTGGCCTGGCACTGCATGGAGCCAGCACGTT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTCCCACTCTCAGGGATaGAGCTGTGATGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSSHSQG*SCDGEV
Trigger: AACCTCTCCATCACAGCTGCATCCCTGAGAGTGGGA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTGCATAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGCIDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTATGCA...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTGCGGTCTGGGCCACTaGATAGATGTGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGCGLGH*IDVGCH
Trigger: ATGGCACCCCACATCTATGCAGTGGCCCAGACCGCA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCAGCATCGCCCTGTATaGGGTCTGGGCCACTGCATA +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTQHRPV*GLGHCI
Trigger: TATGCAGTGGCCCAGACCGCATACAGGGCGATGCTG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCAGCATCGCCCTGTATaGGGTCTGGGCCACTGCATA +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGQHRPV*GLGHCI
Trigger: TATGCAGTGGCCCAGACCGCATACAGGGCGATGCTG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTCAATGTCAGTCAGGTaGAGGTCAGAGCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGSMSVR*RSEPLA
Trigger: GGCCAGCGGCTCTGACCTGCACCTGACTGACATTGA...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGGGGCTCGGGATCGGTaGCCTGGTCGAGGGATGCCT +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKGARDR*PGRGMP
Trigger: AGGCATCCCTCGACCAGGGCACCGATCCCGAGCCCC...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGACGCTGTCCCCTGACTaGCGGATCATCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRTLSPD*RIISTI
Trigger: GATTGTGGAGATGATCCGGCAGTCAGGGGACAGCGT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTGGTGGTCTTGCCACTaGCACTACTGCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTWWSCH*HYCPGG
Trigger: TCCTCCTGGGCAGTAGTGGCAGTGGCAAGACCACCA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGGGCAGCTGGTGGTCTTaGCACTGCCACTACTGCCCA +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWGSWWS*HCHYCP
Trigger: TGGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCC...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCAGGTACTGCACCAGATaGTGGCAGCTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPRYCTR*WQLVVL
Trigger: CAAGACCACCAGCTGCCAGCATCTGGTGCAGTACCT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGGTTCATCGGGGGAGATaGCCAGCACCTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWVHRGR*PAPSWP
Trigger: CGGCCATGAAGGTGCTGGGCATCTCCCCCGATGAAC...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGCCCCCAGGTGGTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGTTCATCGGGGGAGATaGCCAGCACCTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: SPQVVDGSQNEPAGLLFIVHRGR*PAPSWP
Trigger: CGGCCATGAAGGTGCTGGGCATCTCCCCCGATGAAC...GATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTACCACCTGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGACAGCTCCTCCAGGCTaGAGCCCAGTAGGTACGCAG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWTAPPG*SPVGTQ
Trigger: CTGCGTACCTACTGGGCTGCAGCCTGGAGGAGCTGT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGACAGCTCCTCCAGGCTaGAGCCCAGTAGGTACGCAG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGTAPPG*SPVGTQ
Trigger: CTGCGTACCTACTGGGCTGCAGCCTGGAGGAGCTGT...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCCACCCTTGTGCTGGTaGTTGAAGATGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRPPLCW*LKMAED
Trigger: GTCCTCAGCCATCTTCAAGCACCAGCACAAGGGTGG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTAGGGTGCCACCCTTGTaGTGGTGCTTGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTRVPPL*WCLKMA
Trigger: AGCCATCTTCAAGCACCAGCACAAGGGTGGCACCCT...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACACTCCTGCACGAAGGTaGGCTCGTGGAAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNTPARR*ARGRAS
Trigger: AGAGGCTCTTCCACGAGCGCACCTTCGTGCAGGAGT...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTATCTTTCCAACTCCTaGACGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFYLSNS*TKVRSW
Trigger: CCACGAGCGCACCTTCGTGCAGGAGTTGGAAAGATA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTGTGGTTTGCTGCTGTaGAGAAGGGGGCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPCGLLL*RRGLWP
Trigger: AGGCCAAAGCCCCCTTCTGCACAGCAGCAAACCACA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGAGCACCGTGGCACTaGCTGCGCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSRAPWH*LRGPET
Trigger: TGTTTCTGGGCCGCGCAGGCAGTGCCACGGTGCTCT...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATAGAGCACCGTGGCACTaGCTGCGCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: DNCGSIAVWRCCREGRAHRAPWH*LRGPET
Trigger: TGTTTCTGGGCCGCGCAGGCAGTGCCACGGTGCTCT...ATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAAGGGGCACGTCGAGCTaGAGGAGCCCAGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLRGTSS*RSPASQ
Trigger: CTGCGAGGCTGGGCTCCTGCAGCTCGACGTGCCCCT...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCAGCAGCTCCTCCACTaGCCGCCTTTCATCCACCAC +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWQQLLH*PPFIHH
Trigger: GTGGTGGATGAAAGGCGGGCAGTGGAGGAGCTGCTG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGGCCCATGCAGCAGCTaGTCTTCTCCAGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNGPCSS*SSPDPS
Trigger: GCTTGGATCTGGAGAAGAGCAGCTGCTGCATGGGCC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAGGGCCAGGTAGCCCCTaGAGGCTGCTTGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSGPGSP*RLLGTG
Trigger: CCCTGTTCCAAGCAGCCTGCAGGGGCTACCTGGCCC...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTTTGTTCCGGATCTaGTCCTCTGACAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: PAAMPSRHSSALSFGPVPSLFRI*SSDSCT
Trigger: AGTACAGCTGTCAGAGGAGCAGATCCGGAACAAAGA...TGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTAGCTTGCTCCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGGAGCAAGCT...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCACCCGTTGATCTCCGCTaGCCGGATGAGACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSPVDLR*PDETGL
Trigger: GAGGCCCGTCTCATCCGGGCAGCGGAGATCAACGGG...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCCGCCACTCGCCACCTaGATCATCATCATCCACTTC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRPPLAT*IIIIHF
Trigger: GAAGTGGATGATGATGATGCAGGTGGCGAGTGGCGG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCCGCCACTCGCCACCTaGATCATCATCATCCACTTC +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPPPLAT*IIIIHF
Trigger: GAAGTGGATGATGATGATGCAGGTGGCGAGTGGCGG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGACTCTCCTCACTATCTaGCTGCAGGTCCCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWTLLTI*LQVPEP
Trigger: CGGCTCGGGGACCTGCAGGCAGATAGTGAGGAGAGT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCAGCACCTTTCTCCAGTTCGTGGTTaGGGACCTGCTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SQNEPAGLLFIGGDAQHLSPVRG*GPAGPP
Trigger: TGGAGGGCCAGCAGGTCCGCAACCACGAACTGGAGA...AAGGTGCTGGGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp TTCTATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCACGCTGGGCCTCCTCATaGGCCTGCGAGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FYRGAMEGAVSVRDRSTSRWASS*ACESSL
Trigger: CAGTGAGCTCTCGCAGGCGCATGAGGAGGCCCAGCG...TGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGATAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGCGCTGGGCCTCCTCATaGGCCTGCGAGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWRWASS*ACESSL
Trigger: CAGTGAGCTCTCGCAGGCGCATGAGGAGGCCCAGCG...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCATCTGGATGGTCCCTaGCTGCTCATCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPHLDGP*LLIQLF
Trigger: GAAGAGCTGGATGAGCAGGCAGGGACCATCCAGATG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTCCAGCAGGGCCTTGGTaGGCTTCAGGTCCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: HSDNCGSIAVWRCCREGRPAGPW*ASGPSA
Trigger: TGCGGAAGGACCTGAAGCGCACCAAGGCCCTGCTGG...ACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGGGCAATCTCTCGCTTaGTGGGAGCACTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSGQSLA*WEHCSS
Trigger: TGAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGATCTCCACCTCCATTaGTTTCCGTGCTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLDLHLH*FPCFHG
Trigger: GCCGTGAAAGCACGGAAAGCAATGGAGGTGGAGATC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTCCACTACCTCTGCCTaGCCCAAAATGAGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFSTTSA*PKMSCL
Trigger: TAGGCAGCTCATTTTGGGGCAGGCAGAGGTAGTGGA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCGCCCATCTCCTCCTTaGTGTCCCGGAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVRPSPP*CPGAAS
Trigger: AGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTCAGCCTGCAGGCTCTaGTTAGCAGCCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTSACRL*LAASRL
Trigger: AAGCCTGGAGGCTGCTAACCAGAGCCTGCAGGCTGA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCCTCAAGGCACTCACTTCCAGTAGCTGGTaGGGCTGGAACTCTTTAAGC +
Preference number: 4 (lower is better)
Translates to: EKGEELAVEAGRHALKALTSSSW*GWNSLS
Trigger: GCTTAAAGAGTTCCAGCCCCACCAGCTACTGGAAGT...GAGTGCCTTGAGGGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp CCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCGGGACTTCCAGTAGCTaGTGGGGCTGGAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: PPCPQGTPVHSVSGLSHLGTSSS*WGWNSL
Trigger: TAAAGAGTTCCAGCCCCACCAGCTACTGGAAGTCCC...GAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCATCCACATCCAGGATaGCCCCATCGTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTHPHPG*PHRGPA
Trigger: AGCTGGACCACGATGGGGCCATCCTGGATGTGGATG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACCAAGAACCAGCAGGCTaGGGCCAGCATACGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNQEPAG*GQHTCA
Trigger: TGCACACGTATGCTGGCCCCAGCCTGCTGGTTCTTG...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGGGTCATCGCTGGAGCTaGCTGTACTTAGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWGHRWS*LYLGGP
Trigger: CGGGCCACCTAAGTACAGCCAGCTCCAGCGATGACC...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTCTGTGAGTTCTGCTTaGCCAGTGAGCCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPSVSSA*PVSRTW
Trigger: CCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCATCCCGGCTACGCTaGGAGAAGGAAAAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRSSRLR*EKEKRL
Trigger: CAAGCGCTTTTCCTTCTCCCAGCGTAGCCGGGATGA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCCTCACCTCCACCTGTaGCGAGGGGGCGGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFPHLHL*RGGGRV
Trigger: CACTCTGCCGCCCCCTCGCCACAGGTGGAGGTGAGG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACCTCACCTCCACCTGTaGCGAGGGGGCGGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLPHLHL*RGGGRV
Trigger: CACTCTGCCGCCCCCTCGCCACAGGTGGAGGTGAGG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGTGGTCGAGGGATGCCTaGGCCAGGATGCTGCACCAG +
Preference number: 4 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLWSRDA*ARMLHQ
Trigger: CTGGTGCAGCATCCTGGCCCAGGCATCCCTCGACCA...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTCGGGATCGGTGCCCTaGTCGAGGGATGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSGSVP*SRDAWA
Trigger: GGCCCAGGCATCCCTCGACCAGGGCACCGATCCCGA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGGCTCAGCAAAGTaGACCACACGCCGACAGGCC +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPPGSAK*TTRRQA
Trigger: GGCCTGTCGGCGTGTGGTCCACTTTGCTGAGCCTGG...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCCAGGCTCAGCAAAGTaGACCACACGCCGACAGGCC +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVPGSAK*TTRRQA
Trigger: GGCCTGTCGGCGTGTGGTCCACTTTGCTGAGCCTGG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGAGCTCGCTGAGCTCTaGAATGGGCTGCACCTTGAG +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTELAEL*NGLHLE
Trigger: CTCAAGGTGCAGCCCATTCCAGAGCTCAGCGAGCTC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGAGCTCGCTGAGCTCTaGAATGGGCTGCACCTTGAG +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNELAEL*NGLHLE
Trigger: CTCAAGGTGCAGCCCATTCCAGAGCTCAGCGAGCTC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTGTTTTCGCATCGGATaGCTCCCTGCGAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTCFRIG*LPARSL
Trigger: GAGGGACCTCGCAGGGAGCCATCCGATGCGAAAACA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGATGCTGGCAGCTGGTaGTCTTGCCACTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTDAGSW*SCHCHY
Trigger: GTAGTGGCAGTGGCAAGACCACCAGCTGCCAGCATC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AACAGGGTTAGGTTCCTGCTGGTTTGTTCATCCCGCTGCTCCTCCAGCCGTGCCTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: NRVRFLLVCSSRCSSSRASRERI*EKRVAL
Trigger: CAATGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...GGCACGGCTGGAGGAGCAGCGGGATGAACAAACCAGCAGGAACCTAACCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSRERI*EKRVAL
Trigger: CAATGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGGCCACCTGGCCAGCTTaGTCAAAGTCCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGATWPA*SKSRER
Trigger: CCTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGC...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGCCAAGTGGTTGAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTAKWLR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTCAACCACTTGGC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCAGCAGCTTCTTTGGTaGCTCCCGCAGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVQQLLW*LPQPPG
Trigger: ACCTGGGGGCTGCGGGAGCCACCAAAGAAGCTGCTG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCTTCAGCAGCTTCTTTaGTGGCTCCCGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGLQQLL*WLPQPP
Trigger: TGGGGGCTGCGGGAGCCACCAAAGAAGCTGCTGAAG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCCTGGCGGAAGGAGGTaGAGCGCTGCAGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFPGGRR*SAAGCH
Trigger: GTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGGAGCAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: MPSRHSSALSFGPVPSPREQSEC*LDLRAL
Trigger: TAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGCTC...CCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp ATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCACACTCCCTGCTCAGGGTTCTaGAAGCCCGGGGTGTCGACA +
Preference number: 4 (lower is better)
Translates to: IVGQWRGQSLFETDPLHTPCSGF*KPGVST
Trigger: TGTCGACACCCCGGGCTTCCAGAACCCTGAGCAGGG...AGTGTGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTCCCTGCTCAGGGTTCTaGAAGCCCGGGGTGTCGACA +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLPCSGF*KPGVST
Trigger: TGTCGACACCCCGGGCTTCCAGAACCCTGAGCAGGG...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTGTACTCTACCCAGTTaGTGCCATGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPCTLPS*CHGCGP
Trigger: TGGGCCACAGCCATGGCACCAACTGGGTAGAGTACA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTGGCTGGGTTCTGCTTaGTGTAGTTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPWLGSA*CSSASQ
Trigger: CTGGCTGGCTGAACTACACCAAGCAGAACCCAGCCA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTCCGCATGCTGGTaGCCCGGCGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLFSACW*PGAVPA
Trigger: AGCTGGCACTGCGCCGGGCCACCAGCATGCGGAAAA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGTTTTCCGCATGCTaGTGGCCCGGCGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSRFSAC*WPGAVP
Trigger: TGGCACTGCGCCGGGCCACCAGCATGCGGAAAACCT...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTTGCTCCGCAGCTGCTaGATCTCCTCGTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLLLRSC*ISSSLF
Trigger: GAACAAAGACGAGGAGATCCAGCAGCTGCGGAGCAA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWSASSS*EADSPV
Trigger: CACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTCAGCCGTCAGTCGCTaGCACTTCTTCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSAVSR*HFFLSC
Trigger: GCAGCTCAAGAAGAAGTGCCAGCGACTGACGGCTGA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCCTCCAGGTGCAGCTTaGTGTCTTGCAGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWPPGAA*CLAAQP
Trigger: CGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATGGTTGCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRWLRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCATCCTTGGACTCTTaGGAAGAAATGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PAAMPSRHSSALSFGPVPSSLDS*EEMSWS
Trigger: GCTCCAGGACATTTCTTCCCAAGAGTCCAAGGATGA...TGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGCCTGTTCCAGCATCTaGATGGTCCCTGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTACSSI*MVPACS
Trigger: TGAGCAGGCAGGGACCATCCAGATGCTGGAACAGGC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTCTCCAGACGCAGCTTaGCCTGTTCCAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSPDAA*PVPASG
Trigger: TCCAGATGCTGGAACAGGCCAAGCTGCGTCTGGAGA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGACTGCCAGCAGGGCCTTaGTGCGCTTCAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRLPAGP*CASGPS
Trigger: GGAAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAG...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCTGCCAGCAGGGCCTTaGTGCGCTTCAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSLPAGP*CASGPS
Trigger: GGAAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATGGTCCAGCATGAGCTaGGCATCTGCCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRWSSMS*ASASRA
Trigger: GGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCAGCTGGTTCTTGAGCTaGGCAATCTCTCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSSWFLS*AISRLL
Trigger: CAGCAAGCGAGAGATTGCCCAGCTCAAGAACCAGCT...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCAGCTGGTTCTTGAGCTaGGCAATCTCTCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPSWFLS*AISRLL
Trigger: CAGCAAGCGAGAGATTGCCCAGCTCAAGAACCAGCT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCTGACTCCTCCAGCTaGTTCTTGAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSDSSS*FLSWAI
Trigger: GATTGCCCAGCTCAAGAACCAGCTGGAGGAGTCAGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CAGTTCGTGGTTGCGGACCTGCTGGCCCTCCAGGTGCAGCTTGGTGTCTTGCAGCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: QFVVADLLALQVQLGVLQPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...CTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCACTGGTCTGACACTTTaGGGAGCAGGCCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPTGLTL*GAGQRP
Trigger: TGGTCTCTGGCCTGCTCCCCAAAGTGTCAGACCAGT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp TATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCAGGCAGCCTCCAGGTCTaGGTCCAGGTAGGAGTGACG +
Preference number: 4 (lower is better)
Translates to: YRGLEVLSRGSCSSSDRSGSLQV*VQVGVT
Trigger: CGTCACTCCTACCTGGACCCAGACCTGGAGGCTGCC...TGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR TCA 90 bp TGGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTCATTCTTCTCACGCTaGAGGCGGCTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: WPLCRCHSDNCGSIAVWRSFFSR*RRLSCS
Trigger: GGAGCAGCTGAGCCGCCTTCAGCGTGAGAAGAATGA...CCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp GATCTTTCTCTTCTTGAAGTGCTGGCGGGCCAGGTAGCCCCTGCAGGCTGCTTGTGGAGATCATTTATCTaGGCCAGGTCCCGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: DLSLLEVLAGQVAPAGCLWRSFI*ARSREA
Trigger: GGCTTCCCGGGACCTGGCTCAGATAAATGATCTCCA...CAAGCAGCCTGCAGGGGCTACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTGGAGATCATTTATCTaGGCCAGGTCCCGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTWRSFI*ARSREA
Trigger: GGCTTCCCGGGACCTGGCTCAGATAAATGATCTCCA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGGTCCCCGATGCGCTTaGATGCCAACTTTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTGPRCA*MPTLGQ
Trigger: CTGACCTAAAGTTGGCATTCAAGCGCATCGGGGACC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGGAGTTGACTGGCCAGTaGGAAGCCGTCCCTATGGAC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGELTGQ*EAVPMD
Trigger: GTCCATAGGGACGGCTTCTCACTGGCCAGTCAACTC...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCAGGGGCAAGGGACTGGACGCTGGACTCATTaGGGTACACCAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RCCREGRAHHLTDQGQGTGRWTH*GTPVRP
Trigger: TGGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCC...AGTCCCTTGCCCCTGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCCCGCCGACAACCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTPADNP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGTTGTCGGCGGG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTACCCCCAGAGGATTATaGGTGCTTAGCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTTPRGL*VLSTGP
Trigger: AGGCCCTGTGCTAAGCACTCATAATCCTCTGGGGGT...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATACCCTCCTCACCCTTaGGGTCATCGCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRYPPHP*GHRWSW
Trigger: CCAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAGTTCTGCTTGGCCAGTaGGCCGAACTTGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSVLLGQ*AELGCP
Trigger: CGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAAC...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGGGCGTCGAGGTTTCTaGGGCGCTCTCATCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFGRRGF*GALIPA
Trigger: AGCCGGGATGAGAGCGCCTCAGAAACCTCGACGCCC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTACTGCCCAGGAGGATaGTTGACTGATCCTGACGGC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGYCPGG*LTDPDG
Trigger: GCCGTCAGGATCAGTCAATCATCCTCCTGGGCAGTA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTGGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGATGTCTGAATGGAGGCTaGGGCCACCTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LGLCVAVTQITVGVSRSGCLNGG*GHLASL
Trigger: CAAGCTGGCCAGGTGGCCTCAGCCTCCATTCAGACA...TCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTGTCTGAATGGAGGCTaGGGCCACCTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVCLNGG*GHLASL
Trigger: CAAGCTGGCCAGGTGGCCTCAGCCTCCATTCAGACA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACGTCATCCTCATCCACATCCAGGATGGCCCCATCGTGGTCCAGCTTCACACGCTCCAGAAGCATTGTCTaGATGGAGGCTGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: TSSSSTSRMAPSWSSFTRSRSIV*MEAEAT
Trigger: GGTGGCCTCAGCCTCCATTCAGACAATGCTTCTGGA...GCGTGTGAAGCTGGACCACGATGGGGCCATCCTGGATGTGGATGAGGATGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGGTAGTAGAAGACGTTaGATGTGGCTTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLGSRRR*MWLHWL
Trigger: CAGCCAGTGAAGCCACATTCAACGTCTTCTACTACC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACCCTTGTGCTGGTGCTTaGAGATGGCTGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNPCAGA*RWLRTA
Trigger: AGCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGG...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGAGTGCTGGCTGGACTTaGGAGCCCTATTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGSAGWT*EPYSPG
Trigger: CCCTGGTGAATAGGGCTCTCAAGTCCAGCCAGCACT...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGACAGTGACTTCTTTTTaGCAGCCGCCATGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRTVTSF*QPPCLW
Trigger: CCACAGGCATGGCGGCTGTCAAAAAGAAGTCACTGT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCATCTGGATGCACAGTaGCTTCTTTTTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFHLDAQ*LLFDSR
Trigger: GCGGCTGTCAAAAAGAAGTCACTGTGCATCCAGATG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCCGGATCTGCTCCTCTaGCAGCTGTACTTCGATGAG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGPDLLL*QLYFDE
Trigger: CTCATCGAAGTACAGCTGTCAGAGGAGCAGATCCGG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGCCAGCCGGTCACTGTTaGGCCGCAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWPAGHC*AAARSS
Trigger: AGAGGAACGAGCTGCGGCTCAACAGTGACCGGCTGG...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCGCTGGCACTTCTTCTTaGGCTGCTGCAGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSAGTSS*AAAEPA
Trigger: AGCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGC...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGGGCCAGGACATCAAAGCGGCGGCGGAACTCGGAAAACACCATGTGGTCAGGGACACAACCTTCTGGGTaGACCCTGCAATGTCCATGT +
Preference number: 4 (lower is better)
Translates to: GARTSKRRRNSENTMWSGTQPSG*TLQCPC
Trigger: ACATGGACATTGCAGGGTTCACCCAGAAGGTTGTGT...CCCTGACCACATGGTGTTTTCCGAGTTCCGCCGCCGCTTTGATGTCCTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACCTTCTTCCTGATCCTTaGCTTTGGCCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNLLPDP*LWPPGP
Trigger: GGGACCTGGAGGCCAAAGTCAAGGATCAGGAAGAAG...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGTTCACCTGGTCGCTaGGGGTGGCGAGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLGSPGR*GWRACP
Trigger: AGGGCAAGCTCGCCACCCTCAGCGACCAGGTGAACC...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGCCGCAGCCGCTTCTCTaGCTCAAAGTCCCGCCGGTT +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWPQPLL*LKVPPV
Trigger: AACCGGCGGGACTTTGAGTCAGAGAAGCGGCTGCGG...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCAGGTGGTCCAGCATaGGCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSGGPA*AGHLPA
Trigger: TGCTGGCAGATGCCCAGCTCATGCTGGACCACCTGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTGGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAAGCTCAAGACCTCGTTaGCGGCAGCCTCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LGLCVAVTQITVGVSRSGSSRPR*RQPPGL
Trigger: CAGACCTGGAGGCTGCCGTCAACGAGGTCTTGAGCT...TCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR TCA 90 bp TGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGACCGCCTCTTGTGCTCTaGGGAAGCTTCGGAGCCGGA +
Preference number: 4 (lower is better)
Translates to: CRCHSDNCGSIAVWRCCRPPLVL*GSFGAG
Trigger: TCCGGCTCCGAAGCTTCCTCAGAGCACAAGAGGCGG...TCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGCCACGGCAGCCTTGTaGTTCTTCATCAATTCGTTC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLATAAL*FFINSF
Trigger: GAACGAATTGATGAAGAAGCACAAGGCTGCCGTGGC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTCCAGCCGTTTCACTTaGGTCCTTTCAAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFSSRFT*VLSNSR
Trigger: CCTGGAGTTTGAAAGGACGCAAGTGAAACGGCTGGA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGGTTCTCGGCTGCAATaGGCTGATCCCGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVGSRLQ*ADPAPQ
Trigger: CTGAGGAGCGGGATCAGCGCATTGCAGCCGAGAACC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGTCCATCTCCAGTTCGTaGTTCTTGCGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWSISSS*FLRLAS
Trigger: CGAGGCGAGCCGCAAGAAGCACGAACTGGAGATGGA...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTCCATCTCCAGTTCGTaGTTCTTGCGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGSISSS*FLRLAS
Trigger: CGAGGCGAGCCGCAAGAAGCACGAACTGGAGATGGA...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTAACTTTAGGTCAGCCTaGAGGCTCTGGTTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTNFRSA*RLWLAA
Trigger: GGCTGCTAACCAGAGCCTGCAGGCTGACCTAAAGTT...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGAACTTTAGGTCAGCCTaGAGGCTCTGGTTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRNFRSA*RLWLAA
Trigger: GGCTGCTAACCAGAGCCTGCAGGCTGACCTAAAGTT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCGCCATCATCAGAAGCTaGCTTGGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPAIIRS*LGRSLV
Trigger: AACAAGGGACCTTCCAAGGCAGCTTCTGATGATGGC...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CAGTTCGTGGTTGCGGACCTGCTGGCCCTCCAGGTGCAGCTTGGTGTCTTGCAGTTGTCGAGAGGGTCGTaGTCATCATCTGACCGATCA +
Preference number: 4 (lower is better)
Translates to: QFVVADLLALQVQLGVLQLSRGS*SSSDRS
Trigger: TGATCGGTCAGATGATGAGCACGACCCTCTCGACAA...CTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTTGTCGAGAGGGTCGTaGTCATCATCTGACCGATCA +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPLSRGS*SSSDRS
Trigger: TGATCGGTCAGATGATGAGCACGACCCTCTCGACAA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGAACGTGCTGGCTCCATaGAGTGCCAGGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLNVLAP*SARPPA
Trigger: GGCAGGTGGCCTGGCACTGCATGGAGCCAGCACGTT...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGAGAGGGAGGTCAACGTaGTGGCTCCATGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGRGRST*WLHAVP
Trigger: TGGCACTGCATGGAGCCAGCACGTTGACCTCCCTCT...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAGGACTTGACCCCGTCAACACGGTCCTCCAGCTCCGAGTCCACATCAGAGTCTCCCACTCTCAGGGATaGAGCTGTGATGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PGLDPVNTVLQLRVHIRVSHSQG*SCDGEV
Trigger: AACCTCTCCATCACAGCTGCATCCCTGAGAGTGGGA...GACTCTGATGTGGACTCGGAGCTGGAGGACCGTGTTGACGGGGTCAAGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGACCAGCGTCTCCAGCTaGACAGAGAAAGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGTSVSS*TEKGLL
Trigger: GAGCAGTCCTTTCTCTGTGCAGCTGGAGACGCTGGT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CAGTTCGTGGTTGCGGACCTGCTGGCCCTCCAGGTGCAGCTTGGTGTCTTGCAGACACACACACTTGTCTaGGTAGGCTTGCTCAACCCA +
Preference number: 4 (lower is better)
Translates to: QFVVADLLALQVQLGVLQTHTLV*VGLLNP
Trigger: TGGGTTGAGCAAGCCTACGCAGACAAGTGTGTGTGT...CTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGACGCTGGCGCAAGGTGTaGAGGACGCTGGACTCATTG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRRWRKV*RTLDSL
Trigger: CAATGAGTCCAGCGTCCTGCACACCTTGCGCCAGCG...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATGCGGTCTGGGCCACTaGATAGATGTGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: EYRGLEVLSRGSCSSSDRCGLGH*IDVGCH
Trigger: ATGGCACCCCACATCTATGCAGTGGCCCAGACCGCA...TCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCGTCGGGGGTTCCAAGTCGTCAAACGCCAGCTCGATGTTCTCCTCCTTGTATCCAGCATCGCCCTGTATaGGGTCTGGGCCACTGCATA +
Preference number: 4 (lower is better)
Translates to: PSGVPSRQTPARCSPPCIQHRPV*GLGHCI
Trigger: TATGCAGTGGCCCAGACCGCATACAGGGCGATGCTG...GATACAAGGAGGAGAACATCGAGCTGGCGTTTGACGACTTGGAACCCCCGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAATGCCTGGGCCAGGATaGTGCACCAGCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRMPGPG*CTSCPS
Trigger: AGAGGGACAGCTGGTGCAGCATCCTGGCCCAGGCAT...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGCCCTGGTCGAGGGATaGCTGGGCCAGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLALVEG*LGQDAA
Trigger: TGCAGCATCCTGGCCCAGGCATCCCTCGACCAGGGC...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTACGCTGTCCCCTGACTaGCGGATCATCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTTLSPD*RIISTI
Trigger: GATTGTGGAGATGATCCGGCAGTCAGGGGACAGCGT...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGGCAGCTGGTGGTCTTaGCACTGCCACTACTGCCCA +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVGSWWS*HCHYCP
Trigger: TGGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGATGGTGGCCAGGTACTaGACCAGATGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGMVARY*TRCWQL
Trigger: CAGCTGCCAGCATCTGGTGCAGTACCTGGCCACCAT...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCCACCCTTGTGCTGGTaGTTGAAGATGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGPPLCW*LKMAED
Trigger: GTCCTCAGCCATCTTCAAGCACCAGCACAAGGGTGG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTGGAGCGCTGCAGGGTaGCACCCTTGTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWWSAAG*HPCAGA
Trigger: AGCACCAGCACAAGGGTGGCACCCTGCAGCGCTCCA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GATCTTTCTCTTCTTGAAGTGCTGGCGGGCCAGGTAGCCCCTGCAGGCTGCTTGCTCAAGGCACTCCAGTaGACTCAGTTTCGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: DLSLLEVLAGQVAPAGCLLKALQ*TQFRAC
Trigger: ACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG...CAAGCAGCCTGCAGGGGCTACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCTCAAGGCACTCCAGTaGACTCAGTTTCGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTLKALQ*TQFRAC
Trigger: ACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCTCAAGGCACTCCAGTaGACTCAGTTTCGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGLKALQ*TQFRAC
Trigger: ACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGAACTCCTGCACGAAGGTaGGCTCGTGGAAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: EYRGLEVLSRGSCSSSDRTPARR*ARGRAS
Trigger: AGAGGCTCTTCCACGAGCGCACCTTCGTGCAGGAGT...TCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTATCTTTCCAACTCCTaGACGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRYLSNS*TKVRSW
Trigger: CCACGAGCGCACCTTCGTGCAGGAGTTGGAAAGATA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGAACCTTGGCGGTACATaGGCATGGCATCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWNLGGT*AWHRAG
Trigger: GCCTGCTCGATGCCATGCGCATGTACCGCCAAGGTT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTGTTTCTTGGTCAGGTaGGGGGCCAGGACATCAAAG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPCFLVR*GARTSK
Trigger: CTTTGATGTCCTGGCCCCGCACCTGACCAAGAAACA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCAGCAGCTCCTCCACTaGCCGCCTTTCATCCACCAC +
Preference number: 4 (lower is better)
Translates to: TQITVGVSRSGGVVERVVQQLLH*PPFIHH
Trigger: GTGGTGGATGAAAGGCGGGCAGTGGAGGAGCTGCTG...CACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTCAGCAGCTCCTCCACTaGCCGCCTTTCATCCACCAC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLQQLLH*PPFIHH
Trigger: GTGGTGGATGAAAGGCGGGCAGTGGAGGAGCTGCTG...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCACAGGGTTAGGTTCCTaGTGGTTTGTTCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFTGLGS*WFVHPA
Trigger: AGCGGGATGAACAAACCAGCAGGAACCTAACCCTGT...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCCGCCTTCTCGAGCTTaGTCCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSPPSRA*SAAAGS
Trigger: AGATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGCCCGGAGCCTCTCTaGTGTCTCCGCGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSPEPL*CLRVQQ
Trigger: CTGCTGGACGCGGAGACAGCAGAGAGGCTCCGGGCT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACGTCATCCTCATCCACATCCAGGATGGCCCCATCGTGGTCCAGCTTCACACGCCCGCCACTCGCCACCTaGATCATCATCATCCACTTC +
Preference number: 4 (lower is better)
Translates to: TSSSSTSRMAPSWSSFTRPPLAT*IIIIHF
Trigger: GAAGTGGATGATGATGATGCAGGTGGCGAGTGGCGG...GCGTGTGAAGCTGGACCACGATGGGGCCATCCTGGATGTGGATGAGGATGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCCGCCACTCGCCACCTaGATCATCATCATCCACTTC +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGPPLAT*IIIIHF
Trigger: GAAGTGGATGATGATGATGCAGGTGGCGAGTGGCGG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTTGTCCTCAAACTCCTaGTGGAGCCGTTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPLSSNS*WSRFLV
Trigger: CACCAAGAAACGGCTCCAGCAGGAGTTTGAGGACAA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTAGCCGCCGTTCCAGCTaGCTCTTGTTCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLSRRSS*LLFCCS
Trigger: GGAGCAGCAGAACAAGAGGCAGCTGGAACGGCGGCT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCACACTTGCTGGCCCTCCAGGTaGAGCTTGGTGTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: IVGQWRGQSLFETDPLHTCWPSR*SLVSCS
Trigger: GCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCA...AGTGTGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATGCTGGCCCTCCAGGTaGAGCTTGGTGTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRCWPSR*SLVSCS
Trigger: GCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCTGCTGGCCCTCCAGGTaGAGCTTGGTGTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSCWPSR*SLVSCS
Trigger: GCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCA...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTCGTGGTTGCGGACCTaGTGGCCCTCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSWLRT*WPSRCS
Trigger: GCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTCTCCAGTTCGTGGTTaGGGACCTGCTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSPVRG*GPAGPP
Trigger: TGGAGGGCCAGCAGGTCCGCAACCACGAACTGGAGA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCCTCCTTCCTGGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCTTTTCCTCTAGTTGCTaGTTCAGGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ASFLASSPISSLVSRSCLFSSSC*FRLKAS
Trigger: TGAGGCTTTCAGCCTGAAGCAGCAACTAGAGGAAAA...GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CACCAGGGAGACGAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCTCTTTTTCCTCTAGTTaGTGCTTCAGGCTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: HQGDEKGEELAVEAGRHASFSSS*CFRLKA
Trigger: GGCTTTCAGCCTGAAGCAGCAACTAGAGGAAAAAGA...GGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTGGATGGTCCCTGCCTaGTCATCCAGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTWMVPA*SSSSSS
Trigger: GGAAGAAGAGCTGGATGAGCAGGCAGGGACCATCCA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCTGCCAACCACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTGGGCAATCTCTCGCTTaGTGGGAGCACTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AANHSPGLCVSLRQLGLCGQSLA*WEHCSS
Trigger: TGAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCC...ACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTGGTTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCTCCATTGCTTTCCGTaGTTTCACGGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTLHCFP*FHGCRT
Trigger: TGTGCGGCAGCCGTGAAAGCACGGAAAGCAATGGAG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCTCCATTGCTTTCCGTaGTTTCACGGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGLHCFP*FHGCRT
Trigger: TGTGCGGCAGCCGTGAAAGCACGGAAAGCAATGGAG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGATCTCCACCTCCATTaGTTTCCGTGCTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRDLHLH*FPCFHG
Trigger: GCCGTGAAAGCACGGAAAGCAATGGAGGTGGAGATC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTCATCAATCTGCAGGTaGAGGTCTTCGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSSSICR*RSSIST
Trigger: GGTGGAGATCGAAGACCTGCACCTGCAGATTGATGA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGCGATGTCATCAATCTaGAGGTGCAGGTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLAMSSI*RCRSSI
Trigger: GATCGAAGACCTGCACCTGCAGATTGATGACATCGC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCGATGTCATCAATCTaGAGGTGCAGGTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: SRYAAFWAHSWRANCLRPAMSSI*RCRSSI
Trigger: GATCGAAGACCTGCACCTGCAGATTGATGACATCGC...TGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGACCAATCCAGACTTTaGCTGAGCCTGAAGGAACAG +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSDQSRL*LSLKEQ
Trigger: CTGTTCCTTCAGGCTCAGGCAAAGTCTGGATTGGTC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CAGGTGGTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGACTTGCGCCCAGCCACTaGAGGTTACCTTTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QVVDGSQNEPAGLLFIGGLAPSH*RLPLVA
Trigger: AGCCACCAAAGGTAACCTGCAGTGGCTGGGCGCAAG...TCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTACCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTCATGGCGGGCAAACTaGTTGCGCCCAGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLSWRAN*LRPATA
Trigger: TGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628822.2
CDS-3UTR GCA 90 bp ATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCAGTCGGGCTCCAGGCTaGTCCGCTGGAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: ITVGVSRSGGVVERVVLISRAPG*SAGMEQ
Trigger: CTGTTCCATTCCAGCGGAGCAGCCTGGAGCCCGACT...GATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACAACTCCACCTGGCTCTaGAGGGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCCCTCCAGAGCCAGGTGGAGTT...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGAACTCCACCTGGCTCTaGAGGGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCCCTCCAGAGCCAGGTGGAGTT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGCGCCCATCTCCTCCTTaGTGTCCCGGAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWRPSPP*CPGAAS
Trigger: AGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCG...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGTCAGCCTGCAGGCTCTaGTTAGCAGCCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWSACRL*LAASRL
Trigger: AAGCCTGGAGGCTGCTAACCAGAGCCTGCAGGCTGA...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCAGTAGCTGGTGGGGCTaGAACTCTTTAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFSSWWG*NSLSCH
Trigger: ATGGCAGCTTAAAGAGTTCCAGCCCCACCAGCTACT...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGGTGGCGAGCTTGCCCTCCAGCTCCCGCTTCTCTCGCAGAACCTTCTGCTTGAGTAGCTGGTGGGGCTaGAACTCTTTAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RVASLPSSSRFSRRTFCLSSWWG*NSLSCH
Trigger: ATGGCAGCTTAAAGAGTTCCAGCCCCACCAGCTACT...CAAGCAGAAGGTTCTGCGAGAGAAGCGGGAGCTGGAGGGCAAGCTCGCCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGGGACTTCCAGTAGCTaGTGGGGCTGGAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPGTSSS*WGWNSL
Trigger: TAAAGAGTTCCAGCCCCACCAGCTACTGGAAGTCCC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGATGGCCCCATCGTaGTCCAGCTTCACACGCACC +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSRMAPS*SSFTRT
Trigger: GGTGCGTGTGAAGCTGGACCACGATGGGGCCATCCT...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCTTAGCACAGGGCCTTaGTGCCCCACTTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSLSTGP*CPTLLR
Trigger: CCGCAGCAAAGTGGGGCACCAAGGCCCTGTGCTAAG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTCTGTGAGTTCTGCTTaGCCAGTGAGCCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSVSSA*PVSRTW
Trigger: CCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTCATCCCGGCTACGCTaGGAGAAGGAAAAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSSRLR*EKEKRL
Trigger: CAAGCGCTTTTCCTTCTCCCAGCGTAGCCGGGATGA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTACACGCCGACAGGCCTaGCCCTCGGGGCCCCGATCC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSTRRQA*PSGPRS
Trigger: GGATCGGGGCCCCGAGGGCCAGGCCTGTCGGCGTGT...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCACCAGGCTCAGCAAAGTaGACCACACGCCGACAGGCC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSPGSAK*TTRRQA
Trigger: GGCCTGTCGGCGTGTGGTCCACTTTGCTGAGCCTGG...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGGATGCTGGCAGCTGGTaGTCTTGCCACTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWDAGSW*SCHCHY
Trigger: GTAGTGGCAGTGGCAAGACCACCAGCTGCCAGCATC...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTGTGGCTTCACTGGCTaGGCGCCGAGCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFCGFTG*APSHTQ
Trigger: CTGCGTGTGGCTCGGCGCCCAGCCAGTGAAGCCACA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGGCCAAGTGGTTGAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWAKWLR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTCAACCACTTGGC...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCTCAGGCTTGGCCAGTaGCACAATCCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFLRLGQ*HNPKHI
Trigger: AATGTGTTTGGGATTGTGCCACTGGCCAAGCCTGAG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCCACTGCTTTTCCTCAGGCTTaGCCAGTGGCACAATCCCAA +
Preference number: 4 (lower is better)
Translates to: LKALQCTQFRACPISQATAFPQA*PVAQSQ
Trigger: TTGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGC...AGTGGCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGACTTCAGCAGCTTCTTTaGTGGCTCCCGCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRLQQLL*WLPQPP
Trigger: TGGGGGCTGCGGGAGCCACCAAAGAAGCTGCTGAAG...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTTCTGGGCCCACTCATaGCGGGCAAACTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPFWAHS*RANCLR
Trigger: GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAAGGTACGCAGCCTTCTaGGCCCACTCATGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: CRCHSDNCGSIAVWRCCRRYAAF*AHSWRA
Trigger: TGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCT...TCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGAGCAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTEQSEC*LDLRAL
Trigger: TAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGCTC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTGTCGACAATCATCATaGAGCAGAGTGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLCRQSS*SRVSAG
Trigger: GCCAGCACTCACTCTGCTCCATGATGATTGTCGACA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTGTCGACAATCATCATaGAGCAGAGTGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSCRQSS*SRVSAG
Trigger: GCCAGCACTCACTCTGCTCCATGATGATTGTCGACA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGACGAAGGTGCGCTCGTaGAAGAGCCTCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLTKVRS*KSLCSR
Trigger: CCGGCTGCAGAGGCTCTTCCACGAGCGCACCTTCGT...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGACGAAGGTGCGCTCGTaGAAGAGCCTCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWTKVRS*KSLCSR
Trigger: CCGGCTGCAGAGGCTCTTCCACGAGCGCACCTTCGT...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTTGGTGCCATGGCTGTaGCCCAGGAGAAAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGLVPWL*PRRKWC
Trigger: ACACCACTTTCTCCTGGGCCACAGCCATGGCACCAA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTGTACTCTACCCAGTTaGTGCCATGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGCTLPS*CHGCGP
Trigger: TGGGCCACAGCCATGGCACCAACTGGGTAGAGTACA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTGGCTGGGTTCTGCTTaGTGTAGTTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGWLGSA*CSSASQ
Trigger: CTGGCTGGCTGAACTACACCAAGCAGAACCCAGCCA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTTTTCCGCATGCTGGTaGCCCGGCGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWFSACW*PGAVPA
Trigger: AGCTGGCACTGCGCCGGGCCACCAGCATGCGGAAAA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGTACGCCCGTGTTTCTTaGTCAGGTGCGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLYARVS*SGAGPG
Trigger: TCCTGGCCCCGCACCTGACCAAGAAACACGGGCGTA...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGGGTTAGGTTCCTGCTaGTTTGTTCATCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPGLGSC*FVHPAA
Trigger: AGCAGCGGGATGAACAAACCAGCAGGAACCTAACCC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTGGTTGCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWWLRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCAGAGACACAACCTTCTaGGTGAACCCTGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPRDTTF*VNPAMS
Trigger: GGACATTGCAGGGTTCACCCAGAAGGTTGTGTCTCT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTGGGAAGAAATGTCCTaGAGCTCTGCCTCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLWEEMS*SSASRD
Trigger: GTCTCTAGAGGCAGAGCTCCAGGACATTTCTTCCCA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAGCCAGGTCCCGGGAAGCCTGAGCCACGGCAGCCTTGTGCTTCTTCATCAATTGTTCCAGCATCTGGATaGTCCCTGCCTGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: EPGPGKPEPRQPCASSSIVPASG*SLPAHP
Trigger: TGGATGAGCAGGCAGGGACCATCCAGATGCTGGAAC...AATTGATGAAGAAGCACAAGGCTGCCGTGGCTCAGGCTTCCCGGGACCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp CCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCTCCATCTCCTTAGAATaGGTCTGTCTCATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PPCPQGTPVHSVSGLSHLSISLE*VCLIRS
Trigger: GGAGCGGATGAGACAGACCCATTCTAAGGAGATGGA...GAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCAATCTCTCGCTTGCTaGGAGCACTGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFQSLAC*EHCSSG
Trigger: ACCTGAAGAACAGTGCTCCCAGCAAGCGAGAGATTG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCAGCTGGTTCTTGAGCTaGGCAATCTCTCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPSWFLS*AISRLL
Trigger: CAGCAAGCGAGAGATTGCCCAGCTCAAGAACCAGCT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTCTATCGTGGGGCAATaGAGGGGGCAGTCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGSIVGQ*RGQSLF
Trigger: GAACAGAGACTGCCCCCTCCATTGCCCCACGATAGA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCTTAGCACAGGGCCTTaGTGCCCCACTTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWLSTGP*CPTLLL
Trigger: GAGCAGCAAAGTGGGGCACCAAGGCCCTGTGCTAAG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533112.5
CDS-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACCACTGCAGGTTTGGTaGCTCCCGCAGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLPLQVW*LPQPPG
Trigger: ACCTGGGGGCTGCGGGAGCCACCAAACCTGCAGTGG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000628822.2
3UTR CAA 72 bp AAGGGTGAAGATGGAGATGACATTCCCGAGTCGTTCTaGGGAGCCCCAGCTACCACTACAGCCCCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: KGEDGDDIPESF*GAPATTTAPSH
Trigger: GTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCCATCTTCACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
3UTR CAA 72 bp CTGCCTAGGCTCTTTAAGTGGCACTGGTCTGACACTTaGGGGAGCAGGCCAGAGACCAGGGTGATGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LPRLFKWHWSDT*GSRPETRVMPS
Trigger: TGAGGGCATCACCCTGGTCTCTGGCCTGCTCCCCAAAGTGTCAGACCAGTGCCACTTAAAGAGCCTAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CAA 72 bp TCCAGCTTGTCCTCAAACTCCTGCTGGAGCCGTTTCTaGGTGAAGTCCACCTCCCGCACAGCCCGCTCATAC +
Preference number: 4 (lower is better)
Translates to: SSLSSNSCWSRF*VKSTSRTARSY
Trigger: GTATGAGCGGGCTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCAGGAGTTTGAGGACAAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 72 bp CTTGAGACGGCTAGCCAGGCTCTCCAGCCGTTTCACTaGCGTCCTTTCAAACTCCAGGCGTGTCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LETASQALQPFH*RPFKLQACLQL
Trigger: GAGCTGGAGACACGCCTGGAGTTTGAAAGGACGCAAGTGAAACGGCTGGAGAGCCTGGCTAGCCGTCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp AGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCAGGGGCAAGGGACTGGTCCCCGATGCGCTTaGATGCCAACTTTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RCCREGRAHHLTDQGQGTGPRCA*MPTLGQ
Trigger: CTGACCTAAAGTTGGCATTCAAGCGCATCGGGGACC...AGTCCCTTGCCCCTGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp ACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGGAGTTGACTGGCCAGTaGGAAGCCGTCCCTATGGAC +
Preference number: 4 (lower is better)
Translates to: TQITVGVSRSGGVVERVVELTGQ*EAVPMD
Trigger: GTCCATAGGGACGGCTTCTCACTGGCCAGTCAACTC...CACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGGACGCTGGACTCATTaGGGTACACCAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLGRWTH*GTPVRP
Trigger: TGGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCCCGCCGACAACCCTTaGACATGTGCATCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGPADNP*TCASPS
Trigger: AGAAGGTGATGCACATGTTCAAGGGTTGTCGGCGGG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGACCCCCAGAGGATTATaGGTGCTTAGCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWTPRGL*VLSTGP
Trigger: AGGCCCTGTGCTAAGCACTCATAATCCTCTGGGGGT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCGAAGCTCTGCCGCTaGCATCCGCTCCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPPKLCR*HPLLFL
Trigger: GAGAAAAAGGAGCGGATGTCAGCGGCAGAGCTTCGG...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAAGCCGCTGGCCACCTTaGTGGGGATGGGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLSRWPP*WGWGWR
Trigger: TCTCCAACCCCATCCCCATCAAGGTGGCCAGCGGCT...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGCCGCTGGCCACCTTaGTGGGGATGGGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSRWPP*WGWGWR
Trigger: TCTCCAACCCCATCCCCATCAAGGTGGCCAGCGGCT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATACCCTCCTCACCCTTaGGGTCATCGCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSYPPHP*GHRWSW
Trigger: CCAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGGGTAGTAGAAGACGTTaGATGTGGCTTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: MPSRHSSALSFGPVPSPRGSRRR*MWLHWL
Trigger: CAGCCAGTGAAGCCACATTCAACGTCTTCTACTACC...CCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR TCA 90 bp TGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCCACTGCAGGTTACCTTAGCTTACTAAACTGCTaGGCTGCCTTCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: WAHSWRANCLRPATAGYLSLLNC*AAFCFS
Trigger: GGAAAAGCAGAAGGCAGCTCAGCAGTTTAGTAAGCT...AAGGTAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR TCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGTGCTTGAAGATGGCTaGGGACAGCTCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLVLEDG*GQLLQA
Trigger: AGCCTGGAGGAGCTGTCCTCAGCCATCTTCAAGCAC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGAGACGAGAAGGGTaGAGAGCTCGCTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWGRREG*RARCRG
Trigger: GCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCC...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTAGTGCTGGCTGGACTTaGGAGCCCTATTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSAGWT*EPYSPG
Trigger: CCCTGGTGAATAGGGCTCTCAAGTCCAGCCAGCACT...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCATCTGGATGCACAGTaGCTTCTTTTTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: MPSRHSSALSFGPVPSPRHLDAQ*LLFDSR
Trigger: GCGGCTGTCAAAAAGAAGTCACTGTGCATCCAGATG...CCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAGCTCACTGCTGCTGCTaGCTCGGCGGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKAHCCC*LGGRRR
Trigger: CCGCCTCCTCCCGCCGAGTCAGCAGCAGCAGTGAGC...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGGSFSS*SAGGPG
Trigger: ACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCCGGATCTGCTCCTCTaGCAGCTGTACTTCGATGAG +
Preference number: 4 (lower is better)
Translates to: WEYRGLEVLSRGSCSSSDPDLLL*QLYFDE
Trigger: CTCATCGAAGTACAGCTGTCAGAGGAGCAGATCCGG...GTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCCGGATCTGCTCCTCTaGCAGCTGTACTTCGATGAG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGPDLLL*QLYFDE
Trigger: CTCATCGAAGTACAGCTGTCAGAGGAGCAGATCCGG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACCAGCCGGTCACTGTTaGGCCGCAGCTCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLPAGHC*AAARSS
Trigger: AGAGGAACGAGCTGCGGCTCAACAGTGACCGGCTGG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCTCCGATGTCAGCTCTaGGATCCGGCTCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKLRCQL*DPALQP
Trigger: CGGCTGGAGAGCCGGATCTCAGAGCTGACATCGGAG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAGGAGCCGTTTCTTGGTaGAGTCCACCTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSGAVSW*SPPPAQ
Trigger: CTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCC...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAGTTGCTGCTTCAGGCTaGAAGCCTCAGCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRVAASG*KPQRGA
Trigger: TGCTCCTCGCTGAGGCTTTCAGCCTGAAGCAGCAAC...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGGTTGCTGCTTCAGGCTaGAAGCCTCAGCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VAVTQITVGVSRSGGVVEVAASG*KPQRGA
Trigger: TGCTCCTCGCTGAGGCTTTCAGCCTGAAGCAGCAAC...CTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCGTTGCTGCTTCAGGCTaGAAGCCTCAGCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSVAASG*KPQRGA
Trigger: TGCTCCTCGCTGAGGCTTTCAGCCTGAAGCAGCAAC...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTACACAACCTTCTGGGTaGACCCTGCAATGTCCATGT +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTTQPSG*TLQCPC
Trigger: ACATGGACATTGCAGGGTTCACCCAGAAGGTTGTGT...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTGTTTTAACTTCTTCTaGCACGACTGCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTCFNFF*HDCRAS
Trigger: GGAGGCCCGGCAGTCGTGTCAGAAGAAGTTAAAACA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCCGCAGCCGCTTCTCTaGCTCAAAGTCCCGCCGGTT +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFPQPLL*LKVPPV
Trigger: AACCGGCGGGACTTTGAGTCAGAGAAGCGGCTGCGG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGTCAGGTGGTCCAGCATaGGCTGGGCATCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLSGGPA*AGHLPA
Trigger: TGCTGGCAGATGCCCAGCTCATGCTGGACCACCTGA...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp TTCTATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCAGCATGGAGTAGGGCATaGAGACAGGGACCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FYRGAMEGAVSVRDRSTSAWSRA*RQGPSR
Trigger: CCTGCTCGGTCCCTGTCTTCATGCCCTACTCCATGC...TGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGATAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTGTCTCCTTCTCAACTaGAACTTGGAGAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLCLLLN*NLEKHW
Trigger: CCAGTGCTTCTCCAAGTTTCAGTTGAGAAGGAGACA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCGTATCTTAGCTTCCTaGCTGCTCACCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGRILAS*LLTRDL
Trigger: CAAGTCCCTGGTGAGCAGGCAGGAAGCTAAGATACG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACCGTATCTTAGCTTCCTaGCTGCTCACCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNRILAS*LLTRDL
Trigger: CAAGTCCCTGGTGAGCAGGCAGGAAGCTAAGATACG...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTCCAGCCGTTTCACTTaGGTCCTTTCAAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSSRFT*VLSNSR
Trigger: CCTGGAGTTTGAAAGGACGCAAGTGAAACGGCTGGA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACTCCCGGTTCTCGGCTaGAATGCGCTGATCCCGCTC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLLPVLG*NALIPL
Trigger: GAGCGGGATCAGCGCATTGCAGCCGAGAACCGGGAG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCTTGGTGTCCCGGAGCTaGCTCTGTAGCCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSLVSRS*LCSRLF
Trigger: GAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAA...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCCAGTTCGTGCTTCTTaGGGCTCGCCTCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKPVRAS*GSPRPP
Trigger: AGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACAACTTTAGGTCAGCCTaGAGGCTCTGGTTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNNFRSA*RLWLAA
Trigger: GGCTGCTAACCAGAGCCTGCAGGCTGACCTAAAGTT...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGCCATCATCAGAAGCTaGCTTGGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPAIIRS*LGRSLV
Trigger: AACAAGGGACCTTCCAAGGCAGCTTCTGATGATGGC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCACTCCCCTGGGCTATaGGTTAGTCTCCGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGHSPGL*VSLRQL
Trigger: AAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGCCCCCAGGTGGTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCCACTCCCCTGGGCTATaGGTTAGTCTCCGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SPQVVDGSQNEPAGLLFIHSPGL*VSLRQL
Trigger: AAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG...GATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTACCACCTGGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTCACTCCCCTGGGCTATaGGTTAGTCTCCGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GLCVAVTQITVGVSRSGGHSPGL*VSLRQL
Trigger: AAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG...ACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000636100.1
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTCAGGGTGTTTCCCATaGAGATCAGCAGTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGSGCFP*RSAVGW
Trigger: CCACCCGACTGCTGATCTGCATGGGAAACACCCTGA...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGAGAGGGAGGTCAACGTaGTGGCTCCATGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVRGRST*WLHAVP
Trigger: TGGCACTGCATGGAGCCAGCACGTTGACCTCCCTCT...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCGAGAGGGAAGGCACTaGTTCTCCTCCCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPREGRH*FSSPNP
Trigger: AGGATTGGGGGAGGAGAAGCAGTGCCTTCCCTCTCG...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCGAGAGGGAAGGCACTaGTTCTCCTCCCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSREGRH*FSSPNP
Trigger: AGGATTGGGGGAGGAGAAGCAGTGCCTTCCCTCTCG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGGATCAGCCCTGAACTaGTGTAGTTGGAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSGSALN*CSWNGF
Trigger: AAACCCATTCCAACTACAGCAGTTCAGGGCTGATCC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTGCATAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLCIDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTATGCA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTGGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGATGCATAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: LGLCVAVTQITVGVSRSGCIDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTATGCA...TCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAATGCGGTCTGGGCCACTaGATAGATGTGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKCGLGH*IDVGCH
Trigger: ATGGCACCCCACATCTATGCAGTGGCCCAGACCGCA...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATGCGGTCTGGGCCACTaGATAGATGTGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRCGLGH*IDVGCH
Trigger: ATGGCACCCCACATCTATGCAGTGGCCCAGACCGCA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAACAGCATCGCCCTGTATaGGGTCTGGGCCACTGCATA +
Preference number: 4 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKQHRPV*GLGHCI
Trigger: TATGCAGTGGCCCAGACCGCATACAGGGCGATGCTG...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTCAATGTCAGTCAGGTaGAGGTCAGAGCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSMSVR*RSEPLA
Trigger: GGCCAGCGGCTCTGACCTGCACCTGACTGACATTGA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAACTTGGCTGCCCGCTaGAGCACCGAGCCACGGAAG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFNLAAR*STEPRK
Trigger: CTTCCGTGGCTCGGTGCTGCAGCGGGCAGCCAAGTT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGATGCCTGGGCCAGGATaGTGCACCAGCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLMPGPG*CTSCPS
Trigger: AGAGGGACAGCTGGTGCAGCATCCTGGCCCAGGCAT...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGACAGGTCCTTGGTGCCTaGACCAGGCTCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRQVLGA*TRLSKV
Trigger: CACTTTGCTGAGCCTGGTGCAGGCACCAAGGACCTG...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCAGGTCCTTGGTGCCTaGACCAGGCTCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPQVLGA*TRLSKV
Trigger: CACTTTGCTGAGCCTGGTGCAGGCACCAAGGACCTG...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGGGCCAGGTCCTTGGTaGCTGCACCAGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKGPGPW*LHQAQQ
Trigger: TTGCTGAGCCTGGTGCAGGCACCAAGGACCTGGCCC...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCTCATCCCTGGACTTaGTCTCCACATTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRSHPWT*SPHCAH
Trigger: ATGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTATGGTGGCCAGGTACTaGACCAGATGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLMVARY*TRCWQL
Trigger: CAGCTGCCAGCATCTGGTGCAGTACCTGGCCACCAT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGATGGTGGCCAGGTACTaGACCAGATGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VAVTQITVGVSRSGGVVEMVARY*TRCWQL
Trigger: CAGCTGCCAGCATCTGGTGCAGTACCTGGCCACCAT...CTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTATGGTGGCCAGGTACTaGACCAGATGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPMVARY*TRCWQL
Trigger: CAGCTGCCAGCATCTGGTGCAGTACCTGGCCACCAT...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCAGGGTGTACAGAGCCTaGCACTTCTCCACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPRVYRA*HFSTEN
Trigger: GTTTTCTGTGGAGAAGTGGCAGGCTCTGTACACCCT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCACTAAACTGCTGAGCTaGCTTCTGCTTTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSTKLLS*LLLFLR
Trigger: CCTGAGGAAAAGCAGAAGGCAGCTCAGCAGTTTAGT...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCTCATGGCGGGCAAACTaGTTGCGCCCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ITVGVSRSGGVVERVVLISWRAN*LRPASA
Trigger: TGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGA...GATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCATGGCGGGCAAACTaGTTGCGCCCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSWRAN*LRPASA
Trigger: TGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR GCA 90 bp TTCTATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCAACAGCTCCTCCAGGCTaGAGCCCAGTAGGTACGCAG +
Preference number: 4 (lower is better)
Translates to: FYRGAMEGAVSVRDRSTSTAPPG*SPVGTQ
Trigger: CTGCGTACCTACTGGGCTGCAGCCTGGAGGAGCTGT...TGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGATAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTGGAGCGCTGCAGGGTaGCACCCTTGTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKWSAAG*HPCAGA
Trigger: AGCACCAGCACAAGGGTGGCACCCTGCAGCGCTCCA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAAAGGAGGTGGAGCGCTaGAGGGTGCCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLKEVER*RVPPLC
Trigger: GCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTT...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAAGGAGGTGGAGCGCTaGAGGGTGCCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFKEVER*RVPPLC
Trigger: GCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGAAGGAGGTGGAGCGCTaGAGGGTGCCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKKEVER*RVPPLC
Trigger: GCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCCCTCGCCTCGTCTGTaGGGGCCAGCGAGCGGACCA +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSPSPRL*GPASGP
Trigger: TGGTCCGCTCGCTGGCCCGCACAGACGAGGCGAGGG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGAGAGCACCGTGGCACTaGCTGCGCGGCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKRAPWH*LRGPET
Trigger: TGTTTCTGGGCCGCGCAGGCAGTGCCACGGTGCTCT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTAACCTTGGCGGTACATaGGCATGGCATCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLNLGGT*AWHRAG
Trigger: GCCTGCTCGATGCCATGCGCATGTACCGCCAAGGTT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAACCTTGGCGGTACATaGGCATGGCATCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRNLGGT*AWHRAG
Trigger: GCCTGCTCGATGCCATGCGCATGTACCGCCAAGGTT...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGGCCCATGCAGCAGCTaGTCTTCTCCAGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVGPCSS*SSPDPS
Trigger: GCTTGGATCTGGAGAAGAGCAGCTGCTGCATGGGCC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAGGCCCATGCAGCAGCTaGTCTTCTCCAGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRGPCSS*SSPDPS
Trigger: GCTTGGATCTGGAGAAGAGCAGCTGCTGCATGGGCC...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGTTTGTTCATCCCGCTaGTCCTCCAGCCGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPVCSSR*SSSRAK
Trigger: CTTGGCACGGCTGGAGGAGCAGCGGGATGAACAAAC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCGTTTGTTCATCCCGCTaGTCCTCCAGCCGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSVCSSR*SSSRAK
Trigger: CTTGGCACGGCTGGAGGAGCAGCGGGATGAACAAAC...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTACAGGGTTAGGTTCCTaGTGGTTTGTTCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTTGLGS*WFVHPA
Trigger: AGCGGGATGAACAAACCAGCAGGAACCTAACCCTGT...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTCTTTGTTCCGGATCTaGTCCTCTGACAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPSLFRI*SSDSCT
Trigger: AGTACAGCTGTCAGAGGAGCAGATCCGGAACAAAGA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCAGCTTGCTCCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TVGVSRSGGVVERVVLIISLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGGAGCAAGCT...GATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCTCCATAACCTCCATCTaGTTCTTCAGTGCATCGTAC +
Preference number: 4 (lower is better)
Translates to: PSRYAAFWAHSWRANCLRSITSI*FFSASY
Trigger: GTACGATGCACTGAAGAAGCAGATGGAGGTTATGGA...GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTTGTCCTCAAACTCCTaGTGGAGCCGTTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPLSSNS*WSRFLV
Trigger: CACCAAGAAACGGCTCCAGCAGGAGTTTGAGGACAA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATGCCTCTTGTTCTGCTaGTCCACCTCCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EYRGLEVLSRGSCSSSDRCLLFC*STSSLS
Trigger: GGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCA...TCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTCCTCACTATCTGCCTaGAGGTCCCCGAGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSSLSA*RSPSRR
Trigger: ACGGCGGCTCGGGGACCTGCAGGCAGATAGTGAGGA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTCTCCAGTTCGTGGTTaGGGACCTGCTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWSPVRG*GPAGPP
Trigger: TGGAGGGCCAGCAGGTCCGCAACCACGAACTGGAGA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTGTCGCTGTCCTGTCAAACCTCCTCTaGTTCTTCTCCAGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: HSPGLCVSLRQLGLCVAVLSNLL*FFSSSW
Trigger: CCACGAACTGGAGAAGAAGCAGAGGAGGTTTGACAG...GACAGCGACACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCTGTCAAACCTCCTCTaGTTCTTCTCCAGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRLSNLL*FFSSSW
Trigger: CCACGAACTGGAGAAGAAGCAGAGGAGGTTTGACAG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCATCTGGATGGTCCCTaGCTGCTCATCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGHLDGP*LLIQLF
Trigger: GAAGAGCTGGATGAGCAGGCAGGGACCATCCAGATG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCTACTCTTCCTCTAGCTaGACCTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: RPAAMPSRHSSALSFGPVYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAGGTGCAGCTAGAGGAAGAGTA...GACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCCAGCAGGGCCTTGGTaGGCTTCAGGTCCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKPAGPW*ASGPSA
Trigger: TGCGGAAGGACCTGAAGCGCACCAAGGCCCTGCTGG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGGGCAATCTCTCGCTTaGTGGGAGCACTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGGQSLA*WEHCSS
Trigger: TGAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCC...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCAGCACCTTCTCCATTGCTTTCCGTaGTTTCACGGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: SQNEPAGLLFIGGDAQHLLHCFP*FHGCRT
Trigger: TGTGCGGCAGCCGTGAAAGCACGGAAAGCAATGGAG...AAGGTGCTGGGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGATCTCCACCTCCATTaGTTTCCGTGCTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNDLHLH*FPCFHG
Trigger: GCCGTGAAAGCACGGAAAGCAATGGAGGTGGAGATC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCATCAATCTGCAGGTaGAGGTCTTCGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPSSICR*RSSIST
Trigger: GGTGGAGATCGAAGACCTGCACCTGCAGATTGATGA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGCGATGTCATCAATCTaGAGGTGCAGGTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRAMSSI*RCRSSI
Trigger: GATCGAAGACCTGCACCTGCAGATTGATGACATCGC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAAATCCGCGTCCCCGGTaGCCCCGATGGAGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: CRCHSDNCGSIAVWRCCRNPRPR*PRWSPL
Trigger: TAAAGGACTCCATCGGGGGCACCGGGGACGCGGATT...TCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGAACTCCACCTGGCTCTaGAGGGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCCCTCCAGAGCCAGGTGGAGTT...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGAACTCCACCTGGCTCTaGAGGGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCCCTCCAGAGCCAGGTGGAGTT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCATCAGCCTGCAGGCTCTaGTTAGCAGCCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: YRGLEVLSRGSCSSSDRSSACRL*LAASRL
Trigger: AAGCCTGGAGGCTGCTAACCAGAGCCTGCAGGCTGA...TGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCTCAGCCTGCAGGCTCTaGTTAGCAGCCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSSACRL*LAASRL
Trigger: AAGCCTGGAGGCTGCTAACCAGAGCCTGCAGGCTGA...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGACTTCCAGTAGCTGGTaGGGCTGGAACTCTTTAAGC +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRTSSSW*GWNSLS
Trigger: GCTTAAAGAGTTCCAGCCCCACCAGCTACTGGAAGT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGAGGATGGCCCCATCGTaGTCCAGCTTCACACGCACC +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLRMAPS*SSFTRT
Trigger: GGTGCGTGTGAAGCTGGACCACGATGGGGCCATCCT...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCATCCACATCCAGGATaGCCCCATCGTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSHPHPG*PHRGPA
Trigger: AGCTGGACCACGATGGGGCCATCCTGGATGTGGATG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCAAGAACCAGCAGGCTaGGGCCAGCATACGTGTGCA +
Preference number: 4 (lower is better)
Translates to: DNCGSIAVWRCCREGRAHQEPAG*GQHTCA
Trigger: TGCACACGTATGCTGGCCCCAGCCTGCTGGTTCTTG...ATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTCTGTGAGTTCTGCTTaGCCAGTGAGCCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSVSSA*PVSRTW
Trigger: CCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAGAGGCTGAGGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCCTCAGCCTC...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGAAGCATTGTCTGAATaGAGGCTGAGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GLCVAVTQITVGVSRSGGEALSE*RLRPPG
Trigger: GCCAGGTGGCCTCAGCCTCCATTCAGACAATGCTTC...ACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGCTTTTCCTCAGGCTTaGCCAGTGGCACAATCCCAA +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNAFPQA*PVAQSQ
Trigger: TTGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCAGCAGCTTCTTTGGTaGCTCCCGCAGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKQQLLW*LPQPPG
Trigger: ACCTGGGGGCTGCGGGAGCCACCAAAGAAGCTGCTG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATTCTGGGCCCACTCATaGCGGGCAAACTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSFWAHS*RANCLR
Trigger: GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGGAGCAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWEQSEC*LDLRAL
Trigger: TAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGCTC...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTGTCGACAATCATCATaGAGCAGAGTGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPCRQSS*SRVSAG
Trigger: GCCAGCACTCACTCTGCTCCATGATGATTGTCGACA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGCTGGGTTCTGCTTaGTGTAGTTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGWLGSA*CSSASQ
Trigger: CTGGCTGGCTGAACTACACCAAGCAGAACCCAGCCA...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATACGCCCGTGTTTCTTaGTCAGGTGCGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSYARVS*SGAGPG
Trigger: TCCTGGCCCCGCACCTGACCAAGAAACACGGGCGTA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGGGTTAGGTTCCTGCTaGTTTGTTCATCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNGLGSC*FVHPAA
Trigger: AGCAGCGGGATGAACAAACCAGCAGGAACCTAACCC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGGGTTAGGTTCCTGCTaGTTTGTTCATCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTGLGSC*FVHPAA
Trigger: AGCAGCGGGATGAACAAACCAGCAGGAACCTAACCC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCACACTCCCCTGCAGGCTGCTTaGAACAGGGTTAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: IVGQWRGQSLFETDPLHTPLQAA*NRVRFL
Trigger: CAGGAACCTAACCCTGTTCCAAGCAGCCTGCAGGGG...AGTGTGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTTCAGTGCATCGTACTaGGTCTGCAGTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSFSASY*VCSSFI
Trigger: GATGAAGGAACTGCAGACCCAGTACGATGCACTGAA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGTCAGCCGTCAGTCGCTaGCACTTCTTCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWSAVSR*HFFLSC
Trigger: GCAGCTCAAGAAGAAGTGCCAGCGACTGACGGCTGA...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTCAGCCGTCAGTCGCTaGCACTTCTTCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGSAVSR*HFFLSC
Trigger: GCAGCTCAAGAAGAAGTGCCAGCGACTGACGGCTGA...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTAGAGACACAACCTTCTaGGTGAACCCTGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTRDTTF*VNPAMS
Trigger: GGACATTGCAGGGTTCACCCAGAAGGTTGTGTCTCT...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTGGGAAGAAATGTCCTaGAGCTCTGCCTCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPWEEMS*SSASRD
Trigger: GTCTCTAGAGGCAGAGCTCCAGGACATTTCTTCCCA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGGTTCCAGCATCTGGATaGTCCCTGCCTGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGVPASG*SLPAHP
Trigger: TGGATGAGCAGGCAGGGACCATCCAGATGCTGGAAC...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCGCCTGTTCCAGCATCTaGATGGTCCCTGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSACSSI*MVPACS
Trigger: TGAGCAGGCAGGGACCATCCAGATGCTGGAACAGGC...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTCAATCTCTCGCTTGCTaGGAGCACTGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTQSLAC*EHCSSG
Trigger: ACCTGAAGAACAGTGCTCCCAGCAAGCGAGAGATTG...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACAGCTGGTTCTTGAGCTaGGCAATCTCTCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSWFLS*AISRLL
Trigger: CAGCAAGCGAGAGATTGCCCAGCTCAAGAACCAGCT...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCGTAATTATTTCCACATaGGTCTGCTCCAGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPVIIST*VCSSPR
Trigger: ACGAGGGCTGGAGCAGACCCATGTGGAAATAATTAC...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGGCTCCTGGACTCCTCTaGGGCCAAGGGAATTGTCTC +
Preference number: 4 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLAPGLL*GQGNCL
Trigger: GAGACAATTCCCTTGGCCCCAGAGGAGTCCAGGAGC...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp TGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAAACACACTTTCCGCATaGCCTGGCCTGGAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: CRCHSDNCGSIAVWRCCRNTLSA*PGLEQP
Trigger: GGGCTGCTCCAGGCCAGGCCATGCGGAAAGTGTGTT...TCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 72 bp TCCAGCTGCCTCTTGTTCTGCTGCTCCACCTCCAGCTaGTCCTCAAACTCCTGCTGGAGCCGTTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SSCLLFCCSTSS*SSNSCWSRFLV
Trigger: CACCAAGAAACGGCTCCAGCAGGAGTTTGAGGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
3UTR CAA 72 bp TCCTCCAGCTGGTTCTTGAGCTGGGCAATCTCTCGCTaGCTGGGAGCACTGTTCTTCAGGTGGTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: SSSWFLSWAISR*LGALFFRWSSM
Trigger: CATGCTGGACCACCTGAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTGGAGATCATTTATCTaGGCCAGGTCCCGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLWRSFI*ARSREA
Trigger: GGCTTCCCGGGACCTGGCTCAGATAAATGATCTCCA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGGTCCCCGATGCGCTTaGATGCCAACTTTAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPGPRCA*MPTLGQ
Trigger: CTGACCTAAAGTTGGCATTCAAGCGCATCGGGGACC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATTGACAACCAGGACTTaGCCCCGTCAACACGGTCCT +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRLTTRT*PRQHGP
Trigger: AGGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCACACTATTGAGGTACACCAGTaGGGCCAGATCCTCCAGACG +
Preference number: 4 (lower is better)
Translates to: IVGQWRGQSLFETDPLHTIEVHQ*GQILQT
Trigger: CGTCTGGAGGATCTGGCCTCACTGGTGTACCTCAAT...AGTGTGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp GATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATATTGAGGTACACCAGTaGGGCCAGATCCTCCAGACG +
Preference number: 4 (lower is better)
Translates to: DNCGSIAVWRCCREGRAHIEVHQ*GQILQT
Trigger: CGTCTGGAGGATCTGGCCTCACTGGTGTACCTCAAT...ATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAATTGAGGTACACCAGTaGGGCCAGATCCTCCAGACG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRIEVHQ*GQILQT
Trigger: CGTCTGGAGGATCTGGCCTCACTGGTGTACCTCAAT...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTACCCCCAGAGGATTATaGGTGCTTAGCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLTPRGL*VLSTGP
Trigger: AGGCCCTGTGCTAAGCACTCATAATCCTCTGGGGGT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGAGCGGTTCAGGTTaGAGAAGCCACGTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFRSGSG*RSHVAG
Trigger: GCCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAAGGAGCGGTTCAGGTTaGAGAAGCCACGTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLRSGSG*RSHVAG
Trigger: GCCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCT...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGCCCAGGAGGATGATTaGCTGATCCTGACGGCTCAT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLAQEDD*LILTAH
Trigger: ATGAGCCGTCAGGATCAGTCAATCATCCTCCTGGGC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGCCCAGGAGGATGATTaGCTGATCCTGACGGCTCAT +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVAQEDD*LILTAH
Trigger: ATGAGCCGTCAGGATCAGTCAATCATCCTCCTGGGC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTACTGCCCAGGAGGATaGTTGACTGATCCTGACGGC +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVYCPGG*LTDPDG
Trigger: GCCGTCAGGATCAGTCAATCATCCTCCTGGGCAGTA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGGTAGTAGAAGACGTTaGATGTGGCTTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGGSRRR*MWLHWL
Trigger: CAGCCAGTGAAGCCACATTCAACGTCTTCTACTACC...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTAGCTTACTAAACTGCTaGGCTGCCTTCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSLLNC*AAFCFS
Trigger: GGAAAAGCAGAAGGCAGCTCAGCAGTTTAGTAAGCT...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTCCTTGTGCTGGTGCTTaGAGATGGCTGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLPCAGA*RWLRTA
Trigger: AGCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGG...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTACAGTGACTTCTTTTTaGCAGCCGCCATGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LWEYRGLEVLSRGSCSSSTVTSF*QPPCLW
Trigger: CCACAGGCATGGCGGCTGTCAAAAAGAAGTCACTGT...AGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCATCTGGATGCACAGTaGCTTCTTTTTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGHLDAQ*LLFDSR
Trigger: GCGGCTGTCAAAAAGAAGTCACTGTGCATCCAGATG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLGSFSS*SAGGPG
Trigger: ACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCCGGATCTGCTCCTCTaGCAGCTGTACTTCGATGAG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVPDLLL*QLYFDE
Trigger: CTCATCGAAGTACAGCTGTCAGAGGAGCAGATCCGG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGACACAACCTTCTGGGTaGACCCTGCAATGTCCATGT +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGTQPSG*TLQCPC
Trigger: ACATGGACATTGCAGGGTTCACCCAGAAGGTTGTGT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCGCACAGGTGAACTCTaGCTCCTCCAGCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSRTGEL*LLQLVL
Trigger: AAGAACCAGCTGGAGGAGTCAGAGTTCACCTGTGCG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGGAAGCACTGGTCATGTaGCAATGCACAGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLEALVM*QCTASL
Trigger: CAGGCTGGCTGTGCATTGTCACATGACCAGTGCTTC...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp GTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGTGGAGTCCTTTAGGGTaGGCCGCTTCCGATAGCTCA +
Preference number: 4 (lower is better)
Translates to: VAVTQITVGVSRSGGVVEWSPLG*AASDSS
Trigger: TGAGCTATCGGAAGCGGCTCACCCTAAAGGACTCCA...CTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR GCA 90 bp ATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCACACTTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: IVGQWRGQSLFETDPLHTLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...AGTGTGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATTGTCCACCATGGACTaGTCCAGGAACTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRLSTMD*SRNSTW
Trigger: CCAGGTGGAGTTCCTGGAGCAGTCCATGGTGGACAA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCGTATCTTAGCTTCCTaGCTGCTCACCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWRILAS*LLTRDL
Trigger: CAAGTCCCTGGTGAGCAGGCAGGAAGCTAAGATACG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTCCAGCCGTTTCACTTaGGTCCTTTCAAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGSSRFT*VLSNSR
Trigger: CCTGGAGTTTGAAAGGACGCAAGTGAAACGGCTGGA...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGAACTTTAGGTCAGCCTaGAGGCTCTGGTTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGNFRSA*RLWLAA
Trigger: GGCTGCTAACCAGAGCCTGCAGGCTGACCTAAAGTT...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACGTCATCCTCATCCACATCCAGGATGGCCCCATCGTGGTCCAGCTTCACACGCGCCATCATCAGAAGCTaGCTTGGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: TSSSSTSRMAPSWSSFTRAIIRS*LGRSLV
Trigger: AACAAGGGACCTTCCAAGGCAGCTTCTGATGATGGC...GCGTGTGAAGCTGGACCACGATGGGGCCATCCTGGATGTGGATGAGGATGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTGGAACTCTTTAAGCTaGCATCATCAGAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSWNSLS*HHQKLP
Trigger: AGGCAGCTTCTGATGATGGCAGCTTAAAGAGTTCCA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTTGTCGAGAGGGTCGTaGTCATCATCTGACCGATCA +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTLSRGS*SSSDRS
Trigger: TGATCGGTCAGATGATGAGCACGACCCTCTCGACAA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTTGTCGAGAGGGTCGTaGTCATCATCTGACCGATCA +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGLSRGS*SSSDRS
Trigger: TGATCGGTCAGATGATGAGCACGACCCTCTCGACAA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATCAGGGTGTTTCCCATaGAGATCAGCAGTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRSGCFP*RSAVGW
Trigger: CCACCCGACTGCTGATCTGCATGGGAAACACCCTGA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTCCCACTCTCAGGGATaGAGCTGTGATGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGSHSQG*SCDGEV
Trigger: AACCTCTCCATCACAGCTGCATCCCTGAGAGTGGGA...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAACCAGCGTCTCCAGCTaGACAGAGAAAGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRTSVSS*TEKGLL
Trigger: GAGCAGTCCTTTCTCTGTGCAGCTGGAGACGCTGGT...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTACCAGCGTCTCCAGCTaGACAGAGAAAGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLTSVSS*TEKGLL
Trigger: GAGCAGTCCTTTCTCTGTGCAGCTGGAGACGCTGGT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTACACACACACTTGTCTaGGTAGGCTTGCTCAACCCA +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTTHTLV*VGLLNP
Trigger: TGGGTTGAGCAAGCCTACGCAGACAAGTGTGTGTGT...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCATTCCAGGCCTCTTCTaGTGCAATCTGTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPIPGLF*CNLFFC
Trigger: ACAGAAGAACAGATTGCAGCAGAAGAGGCCTGGAAT...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCATTCCAGGCCTCTTCTaGTGCAATCTGTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFIPGLF*CNLFFC
Trigger: ACAGAAGAACAGATTGCAGCAGAAGAGGCCTGGAAT...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCCGCGTCCAGCAGCTGGGAGGCGGACTCTCCTGTGTTACGCTCATCTGTCAGCAACCCTTGAACATGTaGATCACCTTCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LRVQQLGGGLSCVTLICQQPLNM*ITFSEY
Trigger: GTACTCTGAGAAGGTGATGCACATGTTCAAGGGTTG...CTGACAGATGAGCGTAACACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCAACCCTTGAACATGTaGATCACCTTCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLQPLNM*ITFSEY
Trigger: GTACTCTGAGAAGGTGATGCACATGTTCAAGGGTTG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCCAGAGGATTATGAGTaGTTAGCACAGGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGPEDYE*LAQGLG
Trigger: ACCAAGGCCCTGTGCTAAGCACTCATAATCCTCTGG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAGATCCAGCATGGTTGTaGGCCGCAGGGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSDPAWL*AAGRSQ
Trigger: TTGGCTTCTCCCTGCGGCGCACAACCATGCTGGATC...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCACAGGTCCTTGGTGCCTaGACCAGGCTCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSQVLGA*TRLSKV
Trigger: CACTTTGCTGAGCCTGGTGCAGGCACCAAGGACCTG...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTTGCTCTCCACATTGTaGCCATTAATCTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFLLSTL*PLISTS
Trigger: ACTGGTGGAGATTAATGGGCACAATGTGGAGAGCAA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTCTCATCCCTGGACTTaGTCTCCACATTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTSHPWT*SPHCAH
Trigger: ATGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTCTCATCCCTGGACTTaGTCTCCACATTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSHPWT*SPHCAH
Trigger: ATGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATGGTGGTCTTGCCACTaGCACTACTGCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSWWSCH*HYCPGG
Trigger: TCCTCCTGGGCAGTAGTGGCAGTGGCAAGACCACCA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGAGGGTGTACAGAGCCTaGCACTTCTCCACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGRVYRA*HFSTEN
Trigger: GTTTTCTGTGGAGAAGTGGCAGGCTCTGTACACCCT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTACTAAACTGCTGAGCTaGCTTCTGCTTTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTTKLLS*LLLFLR
Trigger: CCTGAGGAAAAGCAGAAGGCAGCTCAGCAGTTTAGT...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCACTAAACTGCTGAGCTaGCTTCTGCTTTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPTKLLS*LLLFLR
Trigger: CCTGAGGAAAAGCAGAAGGCAGCTCAGCAGTTTAGT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGAGGGTGCCACCCTTGTaGTGGTGCTTGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVRVPPL*WCLKMA
Trigger: AGCCATCTTCAAGCACCAGCACAAGGGTGGCACCCT...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCACACTCTCAAGGCACTCCAGTaGACTCAGTTTCGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: IVGQWRGQSLFETDPLHTLKALQ*TQFRAC
Trigger: ACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG...AGTGTGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAAGGGGCACGTCGAGCTaGAGGAGCCCAGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKRGTSS*RSPASQ
Trigger: CTGCGAGGCTGGGCTCCTGCAGCTCGACGTGCCCCT...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCACCCGGCTCAGGCCCATaGAGCAGCTGCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSPGSGP*SSCSSP
Trigger: TGGAGAAGAGCAGCTGCTGCATGGGCCTGAGCCGGG...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAGTTTGTTCATCCCGCTaGTCCTCCAGCCGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSVCSSR*SSSRAK
Trigger: CTTGGCACGGCTGGAGGAGCAGCGGGATGAACAAAC...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTAGCTTGCTCCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGGAGCAAGCT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGCTTGCTCCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGGAGCAAGCT...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTAGCTTGCTCCGCAGCTaGTGGATCTCCTCGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSLLRS*WISSSL
Trigger: CAAAGACGAGGAGATCCAGCAGCTGCGGAGCAAGCT...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTCCATAACCTCCATCTaGTTCTTCAGTGCATCGTAC +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFSITSI*FFSASY
Trigger: GTACGATGCACTGAAGAAGCAGATGGAGGTTATGGA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCCGCCACTCGCCACCTaGATCATCATCATCCACTTC +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVPPLAT*IIIIHF
Trigger: GAAGTGGATGATGATGATGCAGGTGGCGAGTGGCGG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCTGCCTCTTGTTCTGCTaGTCCACCTCCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSCLLFC*STSSLS
Trigger: GGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCA...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATGCCTCTTGTTCTGCTaGTCCACCTCCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRCLLFC*STSSLS
Trigger: GGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTGCCTCTTGTTCTGCTaGTCCACCTCCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVCLLFC*STSSLS
Trigger: GGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAACTCTCCTCACTATCTaGCTGCAGGTCCCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLTLLTI*LQVPEP
Trigger: CGGCTCGGGGACCTGCAGGCAGATAGTGAGGAGAGT...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTCTCCAGTTCGTGGTTaGGGACCTGCTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSPVRG*GPAGPP
Trigger: TGGAGGGCCAGCAGGTCCGCAACCACGAACTGGAGA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCTGTCAAACCTCCTCTaGTTCTTCTCCAGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGLSNLL*FFSSSW
Trigger: CCACGAACTGGAGAAGAAGCAGAGGAGGTTTGACAG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCTTCTGGGTGAACCCTaGAATGTCCATGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLLLGEP*NVHVFF
Trigger: GAAAAAGACATGGACATTGCAGGGTTCACCCAGAAG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGGATGGTCCCTaGCTGCTCATCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: DNCGSIAVWRCCREGRAHHLDGP*LLIQLF
Trigger: GAAGAGCTGGATGAGCAGGCAGGGACCATCCAGATG...ATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GATCTTTCTCTTCTTGAAGTGCTGGCGGGCCAGGTAGCCCCTGCAGGCTGCTTGTCATCAATCTGCAGGTaGAGGTCTTCGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: DLSLLEVLAGQVAPAGCLSSICR*RSSIST
Trigger: GGTGGAGATCGAAGACCTGCACCTGCAGATTGATGA...CAAGCAGCCTGCAGGGGCTACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGCGATGTCATCAATCTaGAGGTGCAGGTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNAMSSI*RCRSSI
Trigger: GATCGAAGACCTGCACCTGCAGATTGATGACATCGC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCCCTTTCTGCATGAGCTaGCTCTTAGCTGTCAATGAA +
Preference number: 4 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPPFCMS*LLAVNE
Trigger: TTCATTGACAGCTAAGAGGCAGCTCATGCAGAAAGG...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCCCTGCTTCTCTTTGTTaGCTTCTTCTAGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PRRESPHPTREGRHCFSSPASLC*LLLAEL
Trigger: AAGCTCAGCTAGAAGAAGCCAACAAAGAGAAGCAGG...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTCAGCCTGCAGGCTCTaGTTAGCAGCCTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWSACRL*LAASRL
Trigger: AAGCCTGGAGGCTGCTAACCAGAGCCTGCAGGCTGA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCACATCCACATCCAGGATaGCCCCATCGTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSHPHPG*PHRGPA
Trigger: AGCTGGACCACGATGGGGCCATCCTGGATGTGGATG...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCCCAGTGAGCCGAACTTaGCTGCCCGCTGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCPVSRT*LPAAAP
Trigger: CGGTGCTGCAGCGGGCAGCCAAGTTCGGCTCACTGG...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTCATCCCGGCTACGCTaGGAGAAGGAAAAGCGCTTG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSSRLR*EKEKRL
Trigger: CAAGCGCTTTTCCTTCTCCCAGCGTAGCCGGGATGA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATCGGGATCGGTGCCCTaGTCGAGGGATGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSGSVP*SRDAWA
Trigger: GGCCCAGGCATCCCTCGACCAGGGCACCGATCCCGA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGAGCCAAAGTCTCCAGTaGGCCGTCGTTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLSQSLQ*AVVAAP
Trigger: TGGAGCTGCAACGACGGCCCACTGGAGACTTTGGCT...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGAGCCAAAGTCTCCAGTaGGCCGTCGTTGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWSQSLQ*AVVAAP
Trigger: TGGAGCTGCAACGACGGCCCACTGGAGACTTTGGCT...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGATGCTGGCAGCTGGTaGTCTTGCCACTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWDAGSW*SCHCHY
Trigger: GTAGTGGCAGTGGCAAGACCACCAGCTGCCAGCATC...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATCCAGGGAGAGGATCTaGGAGAAGCGGGTGGCATTG +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSSRERI*EKRVAL
Trigger: CAATGCCACCCGCTTCTCCCAGATCCTCTCCCTGGA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGAGGCTGAGGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCCTCAGCCTC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAGAAGCATTGTCTGAATaGAGGCTGAGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDREALSE*RLRPPG
Trigger: GCCAGGTGGCCTCAGCCTCCATTCAGACAATGCTTC...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCTCAGGCTTGGCCAGTaGCACAATCCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGLRLGQ*HNPKHI
Trigger: AATGTGTTTGGGATTGTGCCACTGGCCAAGCCTGAG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACCTCAGGCTTGGCCAGTaGCACAATCCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNLRLGQ*HNPKHI
Trigger: AATGTGTTTGGGATTGTGCCACTGGCCAAGCCTGAG...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCTGGCGGAAGGAGGTaGAGCGCTGCAGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKPGGRR*SAAGCH
Trigger: GTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGAGCAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLEQSEC*LDLRAL
Trigger: TAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGCTC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGAGCAGAGTGAGTGCTaGCTGGACTTGAGAGCCCTA +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVEQSEC*LDLRAL
Trigger: TAGGGCTCTCAAGTCCAGCCAGCACTCACTCTGCTC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTGTACTCTACCCAGTTaGTGCCATGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLCTLPS*CHGCGP
Trigger: TGGGCCACAGCCATGGCACCAACTGGGTAGAGTACA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATGGCTGGGTTCTGCTTaGTGTAGTTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRWLGSA*CSSASQ
Trigger: CTGGCTGGCTGAACTACACCAAGCAGAACCCAGCCA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGGGGTTAGGTTCCTGCTaGTTTGTTCATCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWGLGSC*FVHPAA
Trigger: AGCAGCGGGATGAACAAACCAGCAGGAACCTAACCC...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTCTGTACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGSVHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTACAGA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTATCCGCGTCCAGCAGCTaGGAGGCGGACTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLSASSS*EADSPV
Trigger: CACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGA...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp AACAGGGTTAGGTTCCTGCTGGTTTGTTCATCCCGCTGCTCCTCCAGCCGTGCCTCCTCAAACTCCTGCTaGAGCCGTTTCTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: NRVRFLLVCSSRCSSSRASSNSC*SRFLVK
Trigger: CTTCACCAAGAAACGGCTCCAGCAGGAGTTTGAGGA...GGCACGGCTGGAGGAGCAGCGGGATGAACAAACCAGCAGGAACCTAACCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTCCTCAAACTCCTGCTaGAGCCGTTTCTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGSSNSC*SRFLVK
Trigger: CTTCACCAAGAAACGGCTCCAGCAGGAGTTTGAGGA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTCCTCAAACTCCTGCTaGAGCCGTTTCTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGSSNSC*SRFLVK
Trigger: CTTCACCAAGAAACGGCTCCAGCAGGAGTTTGAGGA...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCAGCCGTCAGTCGCTaGCACTTCTTCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSAVSR*HFFLSC
Trigger: GCAGCTCAAGAAGAAGTGCCAGCGACTGACGGCTGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCCTCCAGGTGCAGCTTaGTGTCTTGCAGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKPPGAA*CLAAQP
Trigger: CGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATTCTTCTCCAGTTCGTaGTTGCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSFFSSS*LRTCWP
Trigger: GGGCCAGCAGGTCCGCAACCACGAACTGGAGAAGAA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCGAGAAGCCTCATCCTTaGACTCTTGGGAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: CPQGTPVHSVSGLSHLPGEKPHP*TLGKKC
Trigger: ACATTTCTTCCCAAGAGTCCAAGGATGAGGCTTCTC...GCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGAGAAGCCTCATCCTTaGACTCTTGGGAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLEKPHP*TLGKKC
Trigger: ACATTTCTTCCCAAGAGTCCAAGGATGAGGCTTCTC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCGAGAAGCCTCATCCTTaGACTCTTGGGAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFEKPHP*TLGKKC
Trigger: ACATTTCTTCCCAAGAGTCCAAGGATGAGGCTTCTC...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAAGTTCCAGCATCTGGATaGTCCCTGCCTGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKVPASG*SLPAHP
Trigger: TGGATGAGCAGGCAGGGACCATCCAGATGCTGGAAC...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCTCCAGACGCAGCTTaGCCTGTTCCAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSPDAA*PVPASG
Trigger: TCCAGATGCTGGAACAGGCCAAGCTGCGTCTGGAGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAGCCAGGTCCCGGGAAGCCTGAGCCACGGCAGCCTTGTGCTTCTTCATCAATTCAATCTCTCGCTTGCTaGGAGCACTGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: EPGPGKPEPRQPCASSSIQSLAC*EHCSSG
Trigger: ACCTGAAGAACAGTGCTCCCAGCAAGCGAGAGATTG...AATTGATGAAGAAGCACAAGGCTGCCGTGGCTCAGGCTTCCCGGGACCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp AACCACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTGTCGCTGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: NHSPGLCVSLRQLGLCVAALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...AGCGACACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCCTCCAGCGCTGTCTTaGCTTTGGCGATGTCATCAA +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWPPALS*LWRCHQ
Trigger: TTGATGACATCGCCAAAGCCAAGACAGCGCTGGAGG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCCTAGGCTCTTTAAGTaGCACTGGTCTGACACTTTG +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPPRLFK*HWSDTL
Trigger: CAAAGTGTCAGACCAGTGCCACTTAAAGAGCCTAGG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAAATTCACATTGCCCTGTaGGCCCGAGCTAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKIHIAL*ARASSA
Trigger: GGCAGAACTAGCTCGGGCCCACAGGGCAATGTGAAT...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGGTCCCACAGGGGCACTaGTTCCCGCCCATGCTTATT +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLVPQGH*FPPMLI
Trigger: AATAAGCATGGGCGGGAACCAGTGCCCCTGTGGGAC...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp TGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTGCGCTCCGGGCACTTTaGATGCTCTTCCTGTCATCC +
Preference number: 4 (lower is better)
Translates to: CHSDNCGSIAVWRCCREGALRAL*MLFLSS
Trigger: GGATGACAGGAAGAGCATCCAAAGTGCCCGGAGCGC...ACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp TGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGGCCCTTCTTCACACTaGAGCAGCTGTGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: CRCHSDNCGSIAVWRCCRGPSSH*SSCGWR
Trigger: TCTCCAGCCACAGCTGCTCCAGTGTGAAGAAGGGCC...TCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp GTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGACTTCCAGTAGCTGGTaGGGTGCACTAGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: VAVTQITVGVSRSGGVVETSSSW*GALVAL
Trigger: GAGAGCGACTAGTGCACCCCACCAGCTACTGGAAGT...CTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp TGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTGGGACTTCCAGTAGCTaGTGGGGTGCACTAGTCGCT +
Preference number: 4 (lower is better)
Translates to: CHSDNCGSIAVWRCCREGGTSSS*WGALVA
Trigger: AGCGACTAGTGCACCCCACCAGCTACTGGAAGTCCC...ACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
3UTR CAA 72 bp GAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATaGCCCTGTGGGCCCGAGCTAGTTCTGCCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: EQGRDSTPNLFT*PCGPELVLPSF
Trigger: AAAACTTGGCAGAACTAGCTCGGGCCCACAGGGCAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CAA 72 bp AAGTCCAGGGAGAGGATCTGGGAGAAGCGGGTGGCATaGCCATTAATGATGGTGGGGCTGTTCCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: KSRERIWEKRVA*PLMMVGLFPKA
Trigger: AGCCTTTGGGAACAGCCCCACCATCATTAATGGCAATGCCACCCGCTTCTCCCAGATCCTCTCCCTGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTCATTCTTCTCACGCTaGAGGCGGCTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSFFSR*RRLSCS
Trigger: GGAGCAGCTGAGCCGCCTTCAGCGTGAGAAGAATGA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGGACGCTGGACTCATTaGGGTACACCAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFGRWTH*GTPVRP
Trigger: TGGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGGACGCTGGACTCATTaGGGTACACCAGTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKGRWTH*GTPVRP
Trigger: TGGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCC...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCAGAAGGAAAAGCGCTTaGCAATCATCTGTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFRRKSA*QSSVSS
Trigger: AGAACTCACAGATGATTGTCAAGCGCTTTTCCTTCT...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCGCACGCTGTCCCCTaGCTGCCGGATCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKPHAVP*LPDHLH
Trigger: GTGGAGATGATCCGGCAGTCAGGGGACAGCGTGCGG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCCGCACGCTGTCCCCTaGCTGCCGGATCATCTCCAC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSPHAVP*LPDHLH
Trigger: GTGGAGATGATCCGGCAGTCAGGGGACAGCGTGCGG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATACTGCCCAGGAGGATaGTTGACTGATCCTGACGGC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSYCPGG*LTDPDG
Trigger: GCCGTCAGGATCAGTCAATCATCCTCCTGGGCAGTA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATCCAGAAGCATTGTCTaGATGGAGGCTGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSSRSIV*MEAEAT
Trigger: GGTGGCCTCAGCCTCCATTCAGACAATGCTTCTGGA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGGGTAGTAGAAGACGTTaGATGTGGCTTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGGSRRR*MWLHWL
Trigger: CAGCCAGTGAAGCCACATTCAACGTCTTCTACTACC...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGAGCTTACTAAACTGCTaGGCTGCCTTCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGSLLNC*AAFCFS
Trigger: GGAAAAGCAGAAGGCAGCTCAGCAGTTTAGTAAGCT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGTGCTTGAAGATGGCTaGGGACAGCTCCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFVLEDG*GQLLQA
Trigger: AGCCTGGAGGAGCTGTCCTCAGCCATCTTCAAGCAC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCAGGGAGACGAGAAGGGTaGAGAGCTCGCTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSGRREG*RARCRG
Trigger: GCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCC...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGTGCTGGCTGGACTTaGGAGCCCTATTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSAGWT*EPYSPG
Trigger: CCCTGGTGAATAGGGCTCTCAAGTCCAGCCAGCACT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATGTTTTAACTTCTTCTaGCACGACTGCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRCFNFF*HDCRAS
Trigger: GGAGGCCCGGCAGTCGTGTCAGAAGAAGTTAAAACA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTGTTTTAACTTCTTCTaGCACGACTGCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLCFNFF*HDCRAS
Trigger: GGAGGCCCGGCAGTCGTGTCAGAAGAAGTTAAAACA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTGGTTCACCTGGTCGCTaGGGGTGGCGAGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSGSPGR*GWRACP
Trigger: AGGGCAAGCTCGCCACCCTCAGCGACCAGGTGAACC...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACCTCCAGCTGGTTCTTaGGCTGGGCAATCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLPPAGS*AGQSLA
Trigger: AGCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGCGCACAGGTGAACTCTaGCTCCTCCAGCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLRTGEL*LLQLVL
Trigger: AAGAACCAGCTGGAGGAGTCAGAGTTCACCTGTGCG...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTTCTCCTGCAGCTCCTaGTTCTCTTTGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTFSCSS*FSLLAS
Trigger: AGAAGCCAACAAAGAGAAGCAGGAGCTGCAGGAGAA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTCCAGCCGTTTCACTTaGGTCCTTTCAAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGSSRFT*VLSNSR
Trigger: CCTGGAGTTTGAAAGGACGCAAGTGAAACGGCTGGA...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAACTTTAGGTCAGCCTaGAGGCTCTGGTTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VAVTQITVGVSRSGGVVENFRSA*RLWLAA
Trigger: GGCTGCTAACCAGAGCCTGCAGGCTGACCTAAAGTT...CTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGAGCCATCATCAGAAGCTaGCTTGGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: EYRGLEVLSRGSCSSSDRAIIRS*LGRSLV
Trigger: AACAAGGGACCTTCCAAGGCAGCTTCTGATGATGGC...TCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000636100.1
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTGGAACTCTTTAAGCTaGCATCATCAGAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPWNSLS*HHQKLP
Trigger: AGGCAGCTTCTGATGATGGCAGCTTAAAGAGTTCCA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGTCAGGGTGTTTCCCATaGAGATCAGCAGTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLSGCFP*RSAVGW
Trigger: CCACCCGACTGCTGATCTGCATGGGAAACACCCTGA...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAGCTGGCTCCATGCAGTaGCAGGCCACCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKAGSMQ*QATCHC
Trigger: GCAGTGGCAGGTGGCCTGGCACTGCATGGAGCCAGC...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAAGAGGGAGGTCAACGTaGTGGCTCCATGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLRGRST*WLHAVP
Trigger: TGGCACTGCATGGAGCCAGCACGTTGACCTCCCTCT...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCCCACTCTCAGGGATaGAGCTGTGATGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSHSQG*SCDGEV
Trigger: AACCTCTCCATCACAGCTGCATCCCTGAGAGTGGGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGACCAGCGTCTCCAGCTaGACAGAGAAAGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLTSVSS*TEKGLL
Trigger: GAGCAGTCCTTTCTCTGTGCAGCTGGAGACGCTGGT...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACAGCATCGCCCTGTATaGGGTCTGGGCCACTGCATA +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLQHRPV*GLGHCI
Trigger: TATGCAGTGGCCCAGACCGCATACAGGGCGATGCTG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTCAATGTCAGTCAGGTaGAGGTCAGAGCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSMSVR*RSEPLA
Trigger: GGCCAGCGGCTCTGACCTGCACCTGACTGACATTGA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGATCATCTGTGAGTTCTaGTTGGCCAGTGAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGIICEF*LASEPN
Trigger: GTTCGGCTCACTGGCCAAGCAGAACTCACAGATGAT...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAGCCCTGGTCGAGGGATaGCTGGGCCAGGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKALVEG*LGQDAA
Trigger: TGCAGCATCCTGGCCCAGGCATCCCTCGACCAGGGC...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGATCCAGCATGGTTGTaGGCCGCAGGGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKDPAWL*AAGRSQ
Trigger: TTGGCTTCTCCCTGCGGCGCACAACCATGCTGGATC...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCAGGTCCTTGGTGCCTaGACCAGGCTCAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFQVLGA*TRLSKV
Trigger: CACTTTGCTGAGCCTGGTGCAGGCACCAAGGACCTG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAACAAAGCTTTTTACCCCAGGCCGGGTTATTGGAGGTTGATGTTGGAGTTTCCGGGCCAGGTCCTTGGTaGCTGCACCAGGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: EQSFLPQAGLLEVDVGVSGPGPW*LHQAQQ
Trigger: TTGCTGAGCCTGGTGCAGGCACCAAGGACCTGGCCC...GGAAACTCCAACATCAACCTCCAATAACCCGGCCTGGGGTAAAAAGCTTTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGACGCTGTCCCCTGACTaGCGGATCATCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWTLSPD*RIISTI
Trigger: GATTGTGGAGATGATCCGGCAGTCAGGGGACAGCGT...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAACGCTGTCCCCTGACTaGCGGATCATCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSTLSPD*RIISTI
Trigger: GATTGTGGAGATGATCCGGCAGTCAGGGGACAGCGT...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCAGGGTGTACAGAGCCTaGCACTTCTCCACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VDGSQNEPAGLLFIGGDARVYRA*HFSTEN
Trigger: GTTTTCTGTGGAGAAGTGGCAGGCTCTGTACACCCT...GGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAAGAGGCCGGCCGCCATaGCCTCAAGGCACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKRGRPP*PQGTPV
Trigger: CACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCTCT...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACTCCTGCACGAAGGTaGGCTCGTGGAAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFTPARR*ARGRAS
Trigger: AGAGGCTCTTCCACGAGCGCACCTTCGTGCAGGAGT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATGTGGTTTGCTGCTGTaGAGAAGGGGGCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSCGLLL*RRGLWP
Trigger: AGGCCAAAGCCCCCTTCTGCACAGCAGCAAACCACA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTGTTTCTTGGTCAGGTaGGGGGCCAGGACATCAAAG +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLCFLVR*GARTSK
Trigger: CTTTGATGTCCTGGCCCCGCACCTGACCAAGAAACA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCTGTTTCTTGGTCAGGTaGGGGGCCAGGACATCAAAG +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSCFLVR*GARTSK
Trigger: CTTTGATGTCCTGGCCCCGCACCTGACCAAGAAACA...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCACCGCCTTCTCGAGCTTaGTCCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSPPSRA*SAAAGS
Trigger: AGATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGG...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAAGCCCGGAGCCTCTCTaGTGTCTCCGCGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSPEPL*CLRVQQ
Trigger: CTGCTGGACGCGGAGACAGCAGAGAGGCTCCGGGCT...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTCCATAACCTCCATCTaGTTCTTCAGTGCATCGTAC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSITSI*FFSASY
Trigger: GTACGATGCACTGAAGAAGCAGATGGAGGTTATGGA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGTTGTCCTCAAACTCCTaGTGGAGCCGTTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWLSSNS*WSRFLV
Trigger: CACCAAGAAACGGCTCCAGCAGGAGTTTGAGGACAA...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTCTTTTTCCTCTAGTTaGTGCTTCAGGCTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSFSSS*CFRLKA
Trigger: GGCTTTCAGCCTGAAGCAGCAACTAGAGGAAAAAGA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCTTCTGGGTGAACCCTaGAATGTCCATGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPLLGEP*NVHVFF
Trigger: GAAAAAGACATGGACATTGCAGGGTTCACCCAGAAG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATGGATGGTCCCTGCCTaGTCATCCAGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSWMVPA*SSSSSS
Trigger: GGAAGAAGAGCTGGATGAGCAGGCAGGGACCATCCA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGCTCCATTGCTTTCCGTaGTTTCACGGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWLHCFP*FHGCRT
Trigger: TGTGCGGCAGCCGTGAAAGCACGGAAAGCAATGGAG...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGATCTCCACCTCCATTaGTTTCCGTGCTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPDLHLH*FPCFHG
Trigger: GCCGTGAAAGCACGGAAAGCAATGGAGGTGGAGATC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGGCGATGTCATCAATCTaGAGGTGCAGGTCTTCGATC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGAMSSI*RCRSSI
Trigger: GATCGAAGACCTGCACCTGCAGATTGATGACATCGC...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTTCGACTTGGACTTCTTaGTCTTCCGAGAGCGCCCCT +
Preference number: 4 (lower is better)
Translates to: CHSDNCGSIAVWRCCREGSTWTS*SSESAP
Trigger: AGGGGCGCTCTCGGAAGAGCAAGAAGTCCAAGTCGA...ACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCCTGCTTCTCTTTGTTaGCTTCTTCTAGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRPASLC*LLLAEL
Trigger: AAGCTCAGCTAGAAGAAGCCAACAAAGAGAAGCAGG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTAACTCCACCTGGCTCTaGAGGGCTTGTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CHSDNCGSIAVWRCCREGNSTWL*RACSFS
Trigger: GGAGAAGCTACAAGCCCTCCAGAGCCAGGTGGAGTT...ACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGACTTCCAGTAGCTGGTaGGGCTGGAACTCTTTAAGC +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGTSSSW*GWNSLS
Trigger: GCTTAAAGAGTTCCAGCCCCACCAGCTACTGGAAGT...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGGGACTTCCAGTAGCTaGTGGGGCTGGAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVGTSSS*WGWNSL
Trigger: TAAAGAGTTCCAGCCCCACCAGCTACTGGAAGTCCC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGGGACTTCCAGTAGCTaGTGGGGCTGGAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPGTSSS*WGWNSL
Trigger: TAAAGAGTTCCAGCCCCACCAGCTACTGGAAGTCCC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACATCCACATCCAGGATaGCCCCATCGTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLHPHPG*PHRGPA
Trigger: AGCTGGACCACGATGGGGCCATCCTGGATGTGGATG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TTCTATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCATTTCCAGGCGCGTCTTaGATTCACGCTTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FYRGAMEGAVSVRDRSTSFPGAS*IHAWRS
Trigger: GCTCCTCCAAGCGTGAATCCAAGACGCGCCTGGAAA...TGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTGTTTTCGCATCGGATaGCTCCCTGCGAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFCFRIG*LPARSL
Trigger: GAGGGACCTCGCAGGGAGCCATCCGATGCGAAAACA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGATGCTGGCAGCTGGTaGTCTTGCCACTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKDAGSW*SCHCHY
Trigger: GTAGTGGCAGTGGCAAGACCACCAGCTGCCAGCATC...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAGAAGCATTGTCTGAATaGAGGCTGAGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSEALSE*RLRPPG
Trigger: GCCAGGTGGCCTCAGCCTCCATTCAGACAATGCTTC...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGCCAAGTGGTTGAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKAKWLR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTCAACCACTTGGC...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTCTCTCCTCGGGGCCCTaGCGGAAGGAGGTGGAGCGC +
Preference number: 4 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFLSSGP*RKEVER
Trigger: GCGCTCCACCTCCTTCCGCCAGGGCCCCGAGGAGAG...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATTGGTGCCATGGCTGTaGCCCAGGAGAAAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSLVPWL*PRRKWC
Trigger: ACACCACTTTCTCCTGGGCCACAGCCATGGCACCAA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGATGTACTCTACCCAGTTaGTGCCATGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CRCHSDNCGSIAVWRCCRCTLPS*CHGCGP
Trigger: TGGGCCACAGCCATGGCACCAACTGGGTAGAGTACA...TCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTGGCGGTACATGCGCATaGCATCGAGCAGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSGGTCA*HRAGGS
Trigger: GCTCCCGCCTGCTCGATGCCATGCGCATGTACCGCC...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGGGTTAGGTTCCTGCTaGTTTGTTCATCCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPGLGSC*FVHPAA
Trigger: AGCAGCGGGATGAACAAACCAGCAGGAACCTAACCC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCCCCTGCAGGCTGCTTaGAACAGGGTTAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKPLQAA*NRVRFL
Trigger: CAGGAACCTAACCCTGTTCCAAGCAGCCTGCAGGGG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTTCAGTGCATCGTACTaGGTCTGCAGTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNFSASY*VCSSFI
Trigger: GATGAAGGAACTGCAGACCCAGTACGATGCACTGAA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATTCTTCTCCAGTTCGTaGTTGCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLFFSSS*LRTCWP
Trigger: GGGCCAGCAGGTCCGCAACCACGAACTGGAGAAGAA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTCATCCTTGGACTCTTaGGAAGAAATGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGSSLDS*EEMSWS
Trigger: GCTCCAGGACATTTCTTCCCAAGAGTCCAAGGATGA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGCCTGTTCCAGCATCTaGATGGTCCCTGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLACSSI*MVPACS
Trigger: TGAGCAGGCAGGGACCATCCAGATGCTGGAACAGGC...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCTTCTCTGTTCTATCGTaGGGCAATGGAGGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSFSVLS*GNGGGS
Trigger: ACTGCCCCCTCCATTGCCCCACGATAGAACAGAGAA...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTTCTCAACTGAAACTTaGAGAAGCACTGGTCATGTG +
Preference number: 4 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFFSTET*RSTGHV
Trigger: CACATGACCAGTGCTTCTCCAAGTTTCAGTTGAGAA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTAACTGTTCCAGCATCTaGATGGTCCCTGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLNCSSI*MVPACS
Trigger: TGAGCAGGCAGGGACCATCCAGATGCTGGAACAGTT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533112.5
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATGGAGATCATTTATCTaGGCCAGGTCCCGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLWRSFI*ARSREA
Trigger: GGCTTCCCGGGACCTGGCTCAGATAAATGATCTCCA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCGGCTGCAATGCGCTaGTCCCGCTCCTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSAAMR*SRSSVS
Trigger: GCTGACTGAGGAGCGGGATCAGCGCATTGCAGCCGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATCGGCTGCAATGCGCTaGTCCCGCTCCTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSAAMR*SRSSVS
Trigger: GCTGACTGAGGAGCGGGATCAGCGCATTGCAGCCGA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGACCCCCAGAGGATTATaGGTGCTTAGCACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKTPRGL*VLSTGP
Trigger: AGGCCCTGTGCTAAGCACTCATAATCCTCTGGGGGT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTGGCCCGAGTCCAGGATaGCGCTGCCCCGGTTACTAT +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSGPSPG*RCPGYY
Trigger: ATAGTAACCGGGGCAGCGTCATCCTGGACTCGGGCC...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGCCCAGGAGGATGATTaGCTGATCCTGACGGCTCAT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLAQEDD*LILTAH
Trigger: ATGAGCCGTCAGGATCAGTCAATCATCCTCCTGGGC...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTACTGCCCAGGAGGATaGTTGACTGATCCTGACGGC +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKYCPGG*LTDPDG
Trigger: GCCGTCAGGATCAGTCAATCATCCTCCTGGGCAGTA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTATGTCTGAATGGAGGCTaGGGCCACCTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLCLNGG*GHLASL
Trigger: CAAGCTGGCCAGGTGGCCTCAGCCTCCATTCAGACA...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATCCAGAAGCATTGTCTaGATGGAGGCTGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLSRSIV*MEAEAT
Trigger: GGTGGCCTCAGCCTCCATTCAGACAATGCTTCTGGA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACCTTGTGCTGGTGCTTaGAGATGGCTGAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLPCAGA*RWLRTA
Trigger: AGCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCACACTCATCTGGATGCACAGTaGCTTCTTTTTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: IVGQWRGQSLFETDPLHTHLDAQ*LLFDSR
Trigger: GCGGCTGTCAAAAAGAAGTCACTGTGCATCCAGATG...AGTGTGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp GCTGCCAACCACTCCCCTGGGCTATGCGTTAGTCTCCGTCAGCTTGGCCTCTGTCACAAAATGCAGCTTTaGCTTCTTGATGGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: AANHSPGLCVSLRQLGLCHKMQL*LLDGVD
Trigger: ATCGACACCATCAAGAAGTCAAAGCTGCATTTTGTG...ACAGAGGCCAAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTGGTTGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGCACAAAATGCAGCTTTaGCTTCTTGATGGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRHKMQL*LLDGVD
Trigger: ATCGACACCATCAAGAAGTCAAAGCTGCATTTTGTG...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCACAAAATGCAGCTTTaGCTTCTTGATGGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: GDDIPESFLGAPATTTAPHKMQL*LLDGVD
Trigger: ATCGACACCATCAAGAAGTCAAAGCTGCATTTTGTG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLGSFSS*SAGGPG
Trigger: ACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACTCCGATGTCAGCTCTaGGATCCGGCTCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKLRCQL*DPALQP
Trigger: CGGCTGGAGAGCCGGATCTCAGAGCTGACATCGGAG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCTTCTTCCTGATCCTTaGCTTTGGCCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFLLPDP*LWPPGP
Trigger: GGGACCTGGAGGCCAAAGTCAAGGATCAGGAAGAAG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACGCACAGGTGAACTCTaGCTCCTCCAGCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLRTGEL*LLQLVL
Trigger: AAGAACCAGCTGGAGGAGTCAGAGTTCACCTGTGCG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCCAGTCACATTGTACTCTACCCAGTTGGTGCCATGGCTGTGGCCCAGGAGAAAGCCACGGCAGCCTTGTaGTTCTTCATCAATTCGTTC +
Preference number: 4 (lower is better)
Translates to: ASHIVLYPVGAMAVAQEKATAAL*FFINSF
Trigger: GAACGAATTGATGAAGAAGCACAAGGCTGCCGTGGC...TTTCTCCTGGGCCACAGCCATGGCACCAACTGGGTAGAGTACAATGTGACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGCCACGGCAGCCTTGTaGTTCTTCATCAATTCGTTC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLATAAL*FFINSF
Trigger: GAACGAATTGATGAAGAAGCACAAGGCTGCCGTGGC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACTCCCGGTTCTCGGCTaGAATGCGCTGATCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKLPVLG*NALIPL
Trigger: GAGCGGGATCAGCGCATTGCAGCCGAGAACCGGGAG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGCCATCATCAGAAGCTaGCTTGGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPAIIRS*LGRSLV
Trigger: AACAAGGGACCTTCCAAGGCAGCTTCTGATGATGGC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATTTGTCGAGAGGGTCGTaGTCATCATCTGACCGATCA +
Preference number: 4 (lower is better)
Translates to: DNCGSIAVWRCCREGRAHLSRGS*SSSDRS
Trigger: TGATCGGTCAGATGATGAGCACGACCCTCTCGACAA...ATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000636100.1
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGACACACACACTTGTCTaGGTAGGCTTGCTCAACCCA +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVTHTLV*VGLLNP
Trigger: TGGGTTGAGCAAGCCTACGCAGACAAGTGTGTGTGT...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGAGGATCAGCCCTGAACTaGTGTAGTTGGAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: EYRGLEVLSRGSCSSSDRGSALN*CSWNGF
Trigger: AAACCCATTCCAACTACAGCAGTTCAGGGCTGATCC...TCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTATTCCAGGCCTCTTCTaGTGCAATCTGTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGIPGLF*CNLFFC
Trigger: ACAGAAGAACAGATTGCAGCAGAAGAGGCCTGGAAT...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTACGCTGGCGCAAGGTGTaGAGGACGCTGGACTCATTG +
Preference number: 4 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLRWRKV*RTLDSL
Trigger: CAATGAGTCCAGCGTCCTGCACACCTTGCGCCAGCG...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTCCAGAGGATTATGAGTaGTTAGCACAGGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLPEDYE*LAQGLG
Trigger: ACCAAGGCCCTGTGCTAAGCACTCATAATCCTCTGG...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGAGGATTATGAGTaGTTAGCACAGGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPPEDYE*LAQGLG
Trigger: ACCAAGGCCCTGTGCTAAGCACTCATAATCCTCTGG...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTAACTTGGCTGCCCGCTaGAGCACCGAGCCACGGAAG +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSNLAAR*STEPRK
Trigger: CTTCCGTGGCTCGGTGCTGCAGCGGGCAGCCAAGTT...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGATCATCTGTGAGTTCTaGTTGGCCAGTGAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVIICEF*LASEPN
Trigger: GTTCGGCTCACTGGCCAAGCAGAACTCACAGATGAT...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTTGCTCTCCACATTGTaGCCATTAATCTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGLLSTL*PLISTS
Trigger: ACTGGTGGAGATTAATGGGCACAATGTGGAGAGCAA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTCTCATCCCTGGACTTaGTCTCCACATTGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLSHPWT*SPHCAH
Trigger: ATGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGTACTGCACCAGATaGTGGCAGCTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFRYCTR*WQLVVL
Trigger: CAAGACCACCAGCTGCCAGCATCTGGTGCAGTACCT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGGTGTACAGAGCCTaGCACTTCTCCACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSRVYRA*HFSTEN
Trigger: GTTTTCTGTGGAGAAGTGGCAGGCTCTGTACACCCT...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACCACCCTTGTGCTGGTaGTTGAAGATGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLPPLCW*LKMAED
Trigger: GTCCTCAGCCATCTTCAAGCACCAGCACAAGGGTGG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATGTGGTTTGCTGCTGTaGAGAAGGGGGCTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLCGLLL*RRGLWP
Trigger: AGGCCAAAGCCCCCTTCTGCACAGCAGCAAACCACA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACACCGTGGCACTGCCTaGGCGGCCCAGAAACAGGTT +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKHRGTA*AAQKQV
Trigger: AACCTGTTTCTGGGCCGCGCAGGCAGTGCCACGGTG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAAGCAGTGCACAAAATaGAGCTTTGACTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLKQCTK*SFDFLM
Trigger: CATCAAGAAGTCAAAGCTGCATTTTGTGCACTGCTT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTACAGCAGCTCCTCCACTaGCCGCCTTTCATCCACCAC +
Preference number: 4 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLQQLLH*PPFIHH
Trigger: GTGGTGGATGAAAGGCGGGCAGTGGAGGAGCTGCTG...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTACAGGGTTAGGTTCCTaGTGGTTTGTTCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPTGLGS*WFVHPA
Trigger: AGCGGGATGAACAAACCAGCAGGAACCTAACCCTGT...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTGGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAACAGGGTTAGGTTCCTaGTGGTTTGTTCATCCCGCT +
Preference number: 4 (lower is better)
Translates to: LGLCVAVTQITVGVSRSGTGLGS*WFVHPA
Trigger: AGCGGGATGAACAAACCAGCAGGAACCTAACCCTGT...TCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTCCATAACCTCCATCTaGTTCTTCAGTGCATCGTAC +
Preference number: 4 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGSITSI*FFSASY
Trigger: GTACGATGCACTGAAGAAGCAGATGGAGGTTATGGA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTGCCTCTTGTTCTGCTaGTCCACCTCCAGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFCLLFC*STSSLS
Trigger: GGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCTGTCAAACCTCCTCTaGTTCTTCTCCAGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVLSNLL*FFSSSW
Trigger: CCACGAACTGGAGAAGAAGCAGAGGAGGTTTGACAG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTTTTCCTCTAGTTGCTaGTTCAGGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNFSSSC*FRLKAS
Trigger: TGAGGCTTTCAGCCTGAAGCAGCAACTAGAGGAAAA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACATCTGGATGGTCCCTaGCTGCTCATCCAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLHLDGP*LLIQLF
Trigger: GAAGAGCTGGATGAGCAGGCAGGGACCATCCAGATG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAGCAGGGCCTTGGTaGGCTTCAGGTCCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKPAGPW*ASGPSA
Trigger: TGCGGAAGGACCTGAAGCGCACCAAGGCCCTGCTGG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTCATCAATCTGCAGGTaGAGGTCTTCGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLSSICR*RSSIST
Trigger: GGTGGAGATCGAAGACCTGCACCTGCAGATTGATGA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTACTTCCAGTAGCTGGTaGGGCTGGAACTCTTTAAGC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLTSSSW*GWNSLS
Trigger: GCTTAAAGAGTTCCAGCCCCACCAGCTACTGGAAGT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAGGCTCAGCAAAGTaGACCACACGCCGACAGGCC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKPGSAK*TTRRQA
Trigger: GGCCTGTCGGCGTGTGGTCCACTTTGCTGAGCCTGG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGAAGCATTGTCTGAATaGAGGCTGAGGCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLEALSE*RLRPPG
Trigger: GCCAGGTGGCCTCAGCCTCCATTCAGACAATGCTTC...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGCTCAGGCTTGGCCAGTaGCACAATCCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: VAVTQITVGVSRSGGVVELRLGQ*HNPKHI
Trigger: AATGTGTTTGGGATTGTGCCACTGGCCAAGCCTGAG...CTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTGCTTTTCCTCAGGCTTaGCCAGTGGCACAATCCCAA +
Preference number: 4 (lower is better)
Translates to: CHSDNCGSIAVWRCCREGAFPQA*PVAQSQ
Trigger: TTGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGC...ACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCATGTCGACAATCATCATaGAGCAGAGTGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: YRGLEVLSRGSCSSSDRSCRQSS*SRVSAG
Trigger: GCCAGCACTCACTCTGCTCCATGATGATTGTCGACA...TGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTACGAAGGTGCGCTCGTaGAAGAGCCTCTGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSTKVRS*KSLCSR
Trigger: CCGGCTGCAGAGGCTCTTCCACGAGCGCACCTTCGT...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTGTACTCTACCCAGTTaGTGCCATGGCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKCTLPS*CHGCGP
Trigger: TGGGCCACAGCCATGGCACCAACTGGGTAGAGTACA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTGGCTGGGTTCTGCTTaGTGTAGTTCAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKWLGSA*CSSASQ
Trigger: CTGGCTGGCTGAACTACACCAAGCAGAACCCAGCCA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTAGCCAGAGAGCACCGTaGCACTGCCTGCGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFSQRAP*HCLRGP
Trigger: TGGGCCGCGCAGGCAGTGCCACGGTGCTCTCTGGCT...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATTTTCCGCATGCTGGTaGCCCGGCGCAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKFSACW*PGAVPA
Trigger: AGCTGGCACTGCGCCGGGCCACCAGCATGCGGAAAA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCCAGTCACATTGTACTCTACCCAGTTGGTGCCATGGCTGTGGCCCAGGAGAAATCTGTACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: ASHIVLYPVGAMAVAQEKSVHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTACAGA...TTTCTCCTGGGCCACAGCCATGGCACCAACTGGGTAGAGTACAATGTGACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTTGCTCCGCAGCTGCTaGATCTCCTCGTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWLLRSC*ISSSLF
Trigger: GAACAAAGACGAGGAGATCCAGCAGCTGCGGAGCAA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCCCTCCAGGTGCAGCTTaGTGTCTTGCAGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCPPGAA*CLAAQP
Trigger: CGGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGG...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTGGTTGCGGACCTGCTaGCCCTCCAGGTGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSWLRTC*PSRCSL
Trigger: CAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGTTCCAGCATCTGGATaGTCCCTGCCTGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFVPASG*SLPAHP
Trigger: TGGATGAGCAGGCAGGGACCATCCAGATGCTGGAAC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTCTCCAGACGCAGCTTaGCCTGTTCCAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSPDAA*PVPASG
Trigger: TCCAGATGCTGGAACAGGCCAAGCTGCGTCTGGAGA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGTCCATCTCCTTAGAATaGGTCTGTCTCATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLSISLE*VCLIRS
Trigger: GGAGCGGATGAGACAGACCCATTCTAAGGAGATGGA...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTCCATCTCCTTAGAATaGGTCTGTCTCATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSISLE*VCLIRS
Trigger: GGAGCGGATGAGACAGACCCATTCTAAGGAGATGGA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCTGCCAGCAGGGCCTTaGTGCGCTTCAGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSLPAGP*CASGPS
Trigger: GGAAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATGGTCCAGCATGAGCTaGGCATCTGCCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKWSSMS*ASASRA
Trigger: GGCCCTGCTGGCAGATGCCCAGCTCATGCTGGACCA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGACAATCTCTCGCTTGCTaGGAGCACTGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRQSLAC*EHCSSG
Trigger: ACCTGAAGAACAGTGCTCCCAGCAAGCGAGAGATTG...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATCTGACTCCTCCAGCTaGTTCTTGAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSSDSSS*FLSWAI
Trigger: GATTGCCCAGCTCAAGAACCAGCTGGAGGAGTCAGA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTTTCACTTTCTGCAGCTaGGCCCTTCTTCACACTGGA +
Preference number: 4 (lower is better)
Translates to: HSDNCGSIAVWRCCREGRFTFCS*ALLHTG
Trigger: TCCAGTGTGAAGAAGGGCCCAGCTGCAGAAAGTGAA...ACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
3UTR CAA 72 bp CCTAAAGGCTCCTGGACTCCTCTGGGGCCAAGGGAATaGTCTCCTTCTCAACTGAAACTTGGAGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: PKGSWTPLGPRE*SPSQLKLGEAL
Trigger: CAGTGCTTCTCCAAGTTTCAGTTGAGAAGGAGACAATTCCCTTGGCCCCAGAGGAGTCCAGGAGCCTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CAA 72 bp GGCAGGAAGCAGTGCACAAAATGCAGCTTTGACTTCTaGATGGTGTCGATGAGGGCGTCCACCTGTAGCTTC +
Preference number: 4 (lower is better)
Translates to: GRKQCTKCSFDF*MVSMRASTCSF
Trigger: GAAGCTACAGGTGGACGCCCTCATCGACACCATCAAGAAGTCAAAGCTGCATTTTGTGCACTGCTTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp TATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCAAGCTTACTAAACTGCTaGGCTGCCTTCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: YRGLEVLSRGSCSSSDRSSLLNC*AAFCFS
Trigger: GGAAAAGCAGAAGGCAGCTCAGCAGTTTAGTAAGCT...TGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR TCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGCTTACTAAACTGCTaGGCTGCCTTCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRSLLNC*AAFCFS
Trigger: GGAAAAGCAGAAGGCAGCTCAGCAGTTTAGTAAGCT...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCTCTTTCTGGATGGCTaGCATTATCAGAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFLFLDG*HYQSLG
Trigger: GCCGAGGCTCTGATAATGTCAGCCATCCAGAAAGAG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTTGACTCAGTATGAGTaGACAGATTTGGGAATTCAT +
Preference number: 4 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLLTQYE*TDLGIH
Trigger: ATGAATTCCCAAATCTGTTCACTCATACTGAGTCAA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGTTCTCCTGCAGCTCCTaGTTCTCTTTGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AVTQITVGVSRSGGVVERFSCSS*FSLLAS
Trigger: AGAAGCCAACAAAGAGAAGCAGGAGCTGCAGGAGAA...CCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTTCTCCTGCAGCTCCTaGTTCTCTTTGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPFSCSS*FSLLAS
Trigger: AGAAGCCAACAAAGAGAAGCAGGAGCTGCAGGAGAA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATTCTCCTGCAGCTCCTaGTTCTCTTTGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRFSCSS*FSLLAS
Trigger: AGAAGCCAACAAAGAGAAGCAGGAGCTGCAGGAGAA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCGTATCTTAGCTTCCTaGCTGCTCACCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKRILAS*LLTRDL
Trigger: CAAGTCCCTGGTGAGCAGGCAGGAAGCTAAGATACG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCTCCATCTCCAGTTCGTaGTTCTTGCGGCTCGCCTCG +
Preference number: 4 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCSISSS*FLRLAS
Trigger: CGAGGCGAGCCGCAAGAAGCACGAACTGGAGATGGA...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CAGGTGGTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGATGGAACTCTTTAAGCTaGCATCATCAGAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QVVDGSQNEPAGLLFIGGWNSLS*HHQKLP
Trigger: AGGCAGCTTCTGATGATGGCAGCTTAAAGAGTTCCA...TCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTACCACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTCCCACTCTCAGGGATaGAGCTGTGATGGAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSHSQG*SCDGEV
Trigger: AACCTCTCCATCACAGCTGCATCCCTGAGAGTGGGA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TTCTATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCAATCATCTGTGAGTTCTaGTTGGCCAGTGAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: FYRGAMEGAVSVRDRSTSIICEF*LASEPN
Trigger: GTTCGGCTCACTGGCCAAGCAGAACTCACAGATGAT...TGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGATAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAATCATCTGTGAGTTCTaGTTGGCCAGTGAGCCGAAC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSIICEF*LASEPN
Trigger: GTTCGGCTCACTGGCCAAGCAGAACTCACAGATGAT...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAAGCTCTGGAATGGGCTaGACCTTGAGCCGCACGCTG +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSSGMG*TLSRTL
Trigger: CAGCGTGCGGCTCAAGGTGCAGCCCATTCCAGAGCT...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCTGGTGGTCTTGCCACTaGCACTACTGCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCWWSCH*HYCPGG
Trigger: TCCTCCTGGGCAGTAGTGGCAGTGGCAAGACCACCA...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGACTAAACTGCTGAGCTaGCTTCTGCTTTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVTKLLS*LLLFLR
Trigger: CCTGAGGAAAAGCAGAAGGCAGCTCAGCAGTTTAGT...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTATCTTTCCAACTCCTaGACGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFYLSNS*TKVRSW
Trigger: CCACGAGCGCACCTTCGTGCAGGAGTTGGAAAGATA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTGTTTCTTGGTCAGGTaGGGGGCCAGGACATCAAAG +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKCFLVR*GARTSK
Trigger: CTTTGATGTCCTGGCCCCGCACCTGACCAAGAAACA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTGTTTCTTGGTCAGGTaGGGGGCCAGGACATCAAAG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFCFLVR*GARTSK
Trigger: CTTTGATGTCCTGGCCCCGCACCTGACCAAGAAACA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTCTTTGTTCCGGATCTaGTCCTCTGACAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLSLFRI*SSDSCT
Trigger: AGTACAGCTGTCAGAGGAGCAGATCCGGAACAAAGA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCCGCCTTCTCGAGCTTaGTCCGCAGCTGCTGGATCT +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSPPSRA*SAAAGS
Trigger: AGATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATGCTGGCCCTCCAGGTaGAGCTTGGTGTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKCWPSR*SLVSCS
Trigger: GCTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTACTCTTCCTCTAGCTaGACCTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAGGTGCAGCTAGAGGAAGAGTA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGAGTGAGTTGAGATCATaGCACTGCATTCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLSELRS*HCIPAW
Trigger: CCAAGCTGGAATGCAGTGGCATGATCTCAACTCACT...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAGCAATCCCGGGGATCTaGAGTTATAGAGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSAIPGI*SYRGGS
Trigger: AGATCCTCCTCTATAACTGCAGATCCCCGGGATTGC...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTTGGCCTCTGTGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAAGTTTCTTCACTTTCTaGAGCTGGGCCCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LGLCVAVTQITVGVSRSGSFFTF*SWALLH
Trigger: GTGAAGAAGGGCCCAGCTGCAGAAAGTGAAGAAACT...TCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACACAGAGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CCA 90 bp GTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCCTGCTTCTCTTTGTTaGCTTCTTCTAGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: VDGSQNEPAGLLFIGGDAPASLC*LLLAEL
Trigger: AAGCTCAGCTAGAAGAAGCCAACAAAGAGAAGCAGG...GGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGAGTAGCTGGTGGGGCTaGAACTCTTTAAGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWSSWWG*NSLSCH
Trigger: ATGGCAGCTTAAAGAGTTCCAGCCCCACCAGCTACT...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp TTCTATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCAACTTCCAGTAGCTGGTaGGGCTGGAACTCTTTAAGC +
Preference number: 4 (lower is better)
Translates to: FYRGAMEGAVSVRDRSTSTSSSW*GWNSLS
Trigger: GCTTAAAGAGTTCCAGCCCCACCAGCTACTGGAAGT...TGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGATAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCTTAGCACAGGGCCTTaGTGCCCCACTTTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSLSTGP*CPTLLR
Trigger: CCGCAGCAAAGTGGGGCACCAAGGCCCTGTGCTAAG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCCACAATCTCATCCCTaGACTTGCTCTCCACATTGT +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSPQSHP*TCSPHC
Trigger: ACAATGTGGAGAGCAAGTCCAGGGATGAGATTGTGG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GAACAAAGCTTTTTACCCCAGGCCGGGTTATTGGAGGTTGATGTTGGAGTTTCCTGTTTTCGCATCGGATaGCTCCCTGCGAGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: EQSFLPQAGLLEVDVGVSCFRIG*LPARSL
Trigger: GAGGGACCTCGCAGGGAGCCATCCGATGCGAAAACA...GGAAACTCCAACATCAACCTCCAATAACCCGGCCTGGGGTAAAAAGCTTTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAGAGGCTGAGGCCACCTaGCCAGCTTGGTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKEAEAT*PAWSKS
Trigger: GGACTTTGACCAAGCTGGCCAGGTGGCCTCAGCCTC...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCGCCAAGTGGTTGAGGTaGAGCTCTGTCCTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCAKWLR*SSVLRV
Trigger: CACCCTCAGGACAGAGCTCCACCTCAACCACTTGGC...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGCTTTTCCTCAGGCTTaGCCAGTGGCACAATCCCAA +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFAFPQA*PVAQSQ
Trigger: TTGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTTCTGGGCCCACTCATaGCGGGCAAACTGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSFWAHS*RANCLR
Trigger: GCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTGTCGACAATCATCATaGAGCAGAGTGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWCRQSS*SRVSAG
Trigger: GCCAGCACTCACTCTGCTCCATGATGATTGTCGACA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTACGCCCGTGTTTCTTaGTCAGGTGCGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSYARVS*SGAGPG
Trigger: TCCTGGCCCCGCACCTGACCAAGAAACACGGGCGTA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATTCAGTGCATCGTACTaGGTCTGCAGTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRFSASY*VCSSFI
Trigger: GATGAAGGAACTGCAGACCCAGTACGATGCACTGAA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTCAGTGCATCGTACTaGGTCTGCAGTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLFSASY*VCSSFI
Trigger: GATGAAGGAACTGCAGACCCAGTACGATGCACTGAA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTCATCCTTGGACTCTTaGGAAGAAATGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSSLDS*EEMSWS
Trigger: GCTCCAGGACATTTCTTCCCAAGAGTCCAAGGATGA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGGAGAAGCCTCATCCTTaGACTCTTGGGAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGEKPHP*TLGKKC
Trigger: ACATTTCTTCCCAAGAGTCCAAGGATGAGGCTTCTC...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGCTGGTTCTTGAGCTaGGCAATCTCTCGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSWFLS*AISRLL
Trigger: CAGCAAGCGAGAGATTGCCCAGCTCAAGAACCAGCT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATCTGACTCCTCCAGCTaGTTCTTGAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLSDSSS*FLSWAI
Trigger: GATTGCCCAGCTCAAGAACCAGCTGGAGGAGTCAGA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCACTCTTTAAGTGGCACTaGTCTGACACTTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSLFKWH*SDTLGS
Trigger: GCTCCCCAAAGTGTCAGACCAGTGCCACTTAAAGAG...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGCCCAGGCCGGGTTATTaGAGGTTGATGTTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWPRPGY*RLMLEF
Trigger: AAACTCCAACATCAACCTCCAATAACCCGGCCTGGG...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATCATTCTTCTCACGCTaGAGGCGGCTCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSFFSR*RRLSCS
Trigger: GGAGCAGCTGAGCCGCCTTCAGCGTGAGAAGAATGA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTGAGTTGACTGGCCAGTaGGAAGCCGTCCCTATGGAC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSELTGQ*EAVPMD
Trigger: GTCCATAGGGACGGCTTCTCACTGGCCAGTCAACTC...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGGATCTTTCTCTTCTTaGAGTGCTGGCGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLGSFSS*SAGGPG
Trigger: ACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATCC...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAACACAACCTTCTGGGTaGACCCTGCAATGTCCATGT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLTQPSG*TLQCPC
Trigger: ACATGGACATTGCAGGGTTCACCCAGAAGGTTGTGT...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCCTCCAGCTGGTTCTTaGGCTGGGCAATCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSPPAGS*AGQSLA
Trigger: AGCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGCGGGTTATTGGAGGTTaGTGTTGGAGTTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLRVIGG*CWSFQL
Trigger: TAACTGGAAACTCCAACATCAACCTCCAATAACCCG...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGGGAGGATGGATACTATaGTGTGTTCCTCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLGGWIL*CVPLYP
Trigger: TGGGTAGAGAGGAACACATCATAGTATCCATCCTCC...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGCCACGGCAGCCTTGTaGTTCTTCATCAATTCGTTC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLATAAL*FFINSF
Trigger: GAACGAATTGATGAAGAAGCACAAGGCTGCCGTGGC...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTTGGTGTCCCGGAGCTaGCTCTGTAGCCGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSLVSRS*LCSRLF
Trigger: GAACAAGCGGCTACAGAGGCAGCTCCGGGACACCAA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTCCAGTTCGTGCTTCTTaGGGCTCGCCTCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFPVRAS*GSPRPP
Trigger: AGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGG...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTGGAACTCTTTAAGCTaGCATCATCAGAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLWNSLS*HHQKLP
Trigger: AGGCAGCTTCTGATGATGGCAGCTTAAAGAGTTCCA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGTGGAACTCTTTAAGCTaGCATCATCAGAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AVTQITVGVSRSGGVVERWNSLS*HHQKLP
Trigger: AGGCAGCTTCTGATGATGGCAGCTTAAAGAGTTCCA...CCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000636100.1
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATTGTCGAGAGGGTCGTaGTCATCATCTGACCGATCA +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLLSRGS*SSSDRS
Trigger: TGATCGGTCAGATGATGAGCACGACCCTCTCGACAA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGACACACACACTTGTCTaGGTAGGCTTGCTCAACCCA +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKTHTLV*VGLLNP
Trigger: TGGGTTGAGCAAGCCTACGCAGACAAGTGTGTGTGT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGATCAGCCCTGAACTaGTGTAGTTGGAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWGSALN*CSWNGF
Trigger: AAACCCATTCCAACTACAGCAGTTCAGGGCTGATCC...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTATTCCAGGCCTCTTCTaGTGCAATCTGTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLIPGLF*CNLFFC
Trigger: ACAGAAGAACAGATTGCAGCAGAAGAGGCCTGGAAT...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGACAACCCTTGAACATGTaGATCACCTTCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRQPLNM*ITFSEY
Trigger: GTACTCTGAGAAGGTGATGCACATGTTCAAGGGTTG...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATGCATAGATGTGGGGTaGCATGTCCTCCCGCCGACA +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKCIDVG*HVLPPT
Trigger: TGTCGGCGGGAGGACATGGCACCCCACATCTATGCA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTGCGGTCTGGGCCACTaGATAGATGTGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSCGLGH*IDVGCH
Trigger: ATGGCACCCCACATCTATGCAGTGGCCCAGACCGCA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGTTGCTCTCCACATTGTaGCCATTAATCTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLLLSTL*PLISTS
Trigger: ACTGGTGGAGATTAATGGGCACAATGTGGAGAGCAA...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATTGCTCTCCACATTGTaGCCATTAATCTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRLLSTL*PLISTS
Trigger: ACTGGTGGAGATTAATGGGCACAATGTGGAGAGCAA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTGGTGGTCTTGCCACTaGCACTACTGCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSWWSCH*HYCPGG
Trigger: TCCTCCTGGGCAGTAGTGGCAGTGGCAAGACCACCA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATCATGGCGGGCAAACTaGTTGCGCCCAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSWRAN*LRPASA
Trigger: TGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCATGA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR GCA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCCCACCCTTGTGCTGGTaGTTGAAGATGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCPPLCW*LKMAED
Trigger: GTCCTCAGCCATCTTCAAGCACCAGCACAAGGGTGG...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTAAGGAGGTGGAGCGCTaGAGGGTGCCACCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFKEVER*RVPPLC
Trigger: GCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTT...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTACTCCTGCACGAAGGTaGGCTCGTGGAAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSTPARR*ARGRAS
Trigger: AGAGGCTCTTCCACGAGCGCACCTTCGTGCAGGAGT...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTAAGCAGTGCACAAAATaGAGCTTTGACTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: KKVRVFPMQISSRVGETGKQCTK*SFDFLM
Trigger: CATCAAGAAGTCAAAGCTGCATTTTGTGCACTGCTT...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAGGCCCATGCAGCAGCTaGTCTTCTCCAGATCCAAGC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKGPCSS*SSPDPS
Trigger: GCTTGGATCTGGAGAAGAGCAGCTGCTGCATGGGCC...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TTTGTCACACTAGTCCCTAGTAGAAACAGAAAATGTACCACGCTATGTGAAAACCCAGCCGTGCCAAGGTaGCCGCCCGGAAGAACACCC +
Preference number: 4 (lower is better)
Translates to: FVTLVPSRNRKCTTLCENPAVPR*PPGRTP
Trigger: GGGTGTTCTTCCGGGCGGGCACCTTGGCACGGCTGG...GTTTTCACATAGCGTGGTACATTTTCTGTTTCTACTAGGGACTAGTGTGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTCCATAACCTCCATCTaGTTCTTCAGTGCATCGTAC +
Preference number: 4 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLSITSI*FFSASY
Trigger: GTACGATGCACTGAAGAAGCAGATGGAGGTTATGGA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCTGTCAAACCTCCTCTaGTTCTTCTCCAGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFLSNLL*FFSSSW
Trigger: CCACGAACTGGAGAAGAAGCAGAGGAGGTTTGACAG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTTTTCCTCTAGTTGCTaGTTCAGGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPFSSSC*FRLKAS
Trigger: TGAGGCTTTCAGCCTGAAGCAGCAACTAGAGGAAAA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCTCTTTTTCCTCTAGTTaGTGCTTCAGGCTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSSFSSS*CFRLKA
Trigger: GGCTTTCAGCCTGAAGCAGCAACTAGAGGAAAAAGA...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAACTTCTGGGTGAACCCTaGAATGTCCATGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKLLGEP*NVHVFF
Trigger: GAAAAAGACATGGACATTGCAGGGTTCACCCAGAAG...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCAGGGCAATCTCTCGCTTaGTGGGAGCACTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSGQSLA*WEHCSS
Trigger: TGAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCC...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCAGATCTCCACCTCCATTaGTTTCCGTGCTTTCACGGC +
Preference number: 4 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSDLHLH*FPCFHG
Trigger: GCCGTGAAAGCACGGAAAGCAATGGAGGTGGAGATC...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTCATCAATCTGCAGGTaGAGGTCTTCGATCTCCACC +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSSICR*RSSIST
Trigger: GGTGGAGATCGAAGACCTGCACCTGCAGATTGATGA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATTTGTCACCATGTCCTaGAAACTGTTGATGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LFHVETSDTHSLESAPDRFVTMS*KLLMRS
Trigger: GGACCTCATCAACAGTTTGCAGGACATGGTGACAAA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATCATTCCACTACCTCTaGCTGCCCCAAAATGAGCTG +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLSFHYL*LPQNEL
Trigger: CAGCTCATTTTGGGGCAGGCAGAGGTAGTGGAATGA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCTGCTTCTCTTTGTTaGCTTCTTCTAGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPPASLC*LLLAEL
Trigger: AAGCTCAGCTAGAAGAAGCCAACAAAGAGAAGCAGG...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCACCACAATCTCATCCCTaGACTTGCTCTCCACATTGT +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSPQSHP*TCSPHC
Trigger: ACAATGTGGAGAGCAAGTCCAGGGATGAGATTGTGG...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCACCTGTAGCTTCATCTaGATGCACAGTGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: QITVGVSRSGGVVERVVLTCSFI*MHSDFF
Trigger: AAAGAAGTCACTGTGCATCCAGATGAAGCTACAGGT...GAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGACCTGTAGCTTCATCTaGATGCACAGTGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGTCSFI*MHSDFF
Trigger: AAAGAAGTCACTGTGCATCCAGATGAAGCTACAGGT...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTCTGTACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSVHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTACAGA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATTCAGTGCATCGTACTaGGTCTGCAGTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSFSASY*VCSSFI
Trigger: GATGAAGGAACTGCAGACCCAGTACGATGCACTGAA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATCCTCAAACTCCTGCTaGAGCCGTTTCTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLSSNSC*SRFLVK
Trigger: CTTCACCAAGAAACGGCTCCAGCAGGAGTTTGAGGA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATTCTTCTCCAGTTCGTaGTTGCGGACCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKFFSSS*LRTCWP
Trigger: GGGCCAGCAGGTCCGCAACCACGAACTGGAGAAGAA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGAGAGACACAACCTTCTaGGTGAACCCTGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKRDTTF*VNPAMS
Trigger: GGACATTGCAGGGTTCACCCAGAAGGTTGTGTCTCT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTGGGAAGAAATGTCCTaGAGCTCTGCCTCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKWEEMS*SSASRD
Trigger: GTCTCTAGAGGCAGAGCTCCAGGACATTTCTTCCCA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGTCATCCTTGGACTCTTaGGAAGAAATGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLSSLDS*EEMSWS
Trigger: GCTCCAGGACATTTCTTCCCAAGAGTCCAAGGATGA...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACAATCTCTCGCTTGCTaGGAGCACTGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLQSLAC*EHCSSG
Trigger: ACCTGAAGAACAGTGCTCCCAGCAAGCGAGAGATTG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTCTTCACATAAAAGGTaGGGCTTGTGTCTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSSHKR*GLCLPW
Trigger: CCAAGGAAGACACAAGCCCCACCTTTTATGTGAAGA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp ATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCACACTAACTTGGAGAAGCACTaGTCATGTGACAATGCACAG +
Preference number: 4 (lower is better)
Translates to: IVGQWRGQSLFETDPLHTNLEKH*SCDNAQ
Trigger: CTGTGCATTGTCACATGACCAGTGCTTCTCCAAGTT...AGTGTGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CAA 72 bp ATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGGCTTaGAGCCTGGCAAAGGGCCAGATTTGCCTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: ICSYRGGSSRLA*SLAKGQICLLQ
Trigger: TTGCAGAAGGCAAATCTGGCCCTTTGCCAGGCTCAAAGCCAGCCTGCTAGATCCTCCTCTATAACTGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATTGACAACCAGGACTTaGCCCCGTCAACACGGTCCT +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKLTTRT*PRQHGP
Trigger: AGGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAATTGAGGTACACCAGTaGGGCCAGATCCTCCAGACG +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKIEVHQ*GQILQT
Trigger: CGTCTGGAGGATCTGGCCTCACTGGTGTACCTCAAT...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGAAGGAAAAGCGCTTaGCAATCATCTGTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSRRKSA*QSSVSS
Trigger: AGAACTCACAGATGATTGTCAAGCGCTTTTCCTTCT...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTAGAAGGAAAAGCGCTTaGCAATCATCTGTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPRRKSA*QSSVSS
Trigger: AGAACTCACAGATGATTGTCAAGCGCTTTTCCTTCT...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATCCAGAAGCATTGTCTaGATGGAGGCTGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSRSIV*MEAEAT
Trigger: GGTGGCCTCAGCCTCCATTCAGACAATGCTTCTGGA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGCTTACTAAACTGCTaGGCTGCCTTCTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSLLNC*AAFCFS
Trigger: GGAAAAGCAGAAGGCAGCTCAGCAGTTTAGTAAGCT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCCGGATCTGCTCCTCTaGCAGCTGTACTTCGATGAG +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSPDLLL*QLYFDE
Trigger: CTCATCGAAGTACAGCTGTCAGAGGAGCAGATCCGG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTGGAGCCGTTTCTTGGTaGAGTCCACCTCCCGCACAG +
Preference number: 4 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFGAVSW*SPPPAQ
Trigger: CTGTGCGGGAGGTGGACTTCACCAAGAAACGGCTCC...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCTTCTTCCTGATCCTTaGCTTTGGCCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSLLPDP*LWPPGP
Trigger: GGGACCTGGAGGCCAAAGTCAAGGATCAGGAAGAAG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAAAGGCTTGACTCAGTATaGGTGAACAGATTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKRLDSV*VNRFGN
Trigger: ATTCCCAAATCTGTTCACTCATACTGAGTCAAGCCT...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCAGCCACGGCAGCCTTGTaGTTCTTCATCAATTCGTTC +
Preference number: 4 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSATAAL*FFINSF
Trigger: GAACGAATTGATGAAGAAGCACAAGGCTGCCGTGGC...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACACTCCCCTGGGCTATaGGTTAGTCTCCGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKHSPGL*VSLRQL
Trigger: AAGCTGACGGAGACTAACGCATAGCCCAGGGGAGTG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TTTGTCACACTAGTCCCTAGTAGAAACAGAAAATGTACCACGCTATGTGAAAACGCTGGCTCCATGCAGTaGCAGGCCACCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FVTLVPSRNRKCTTLCENAGSMQ*QATCHC
Trigger: GCAGTGGCAGGTGGCCTGGCACTGCATGGAGCCAGC...GTTTTCACATAGCGTGGTACATTTTCTGTTTCTACTAGGGACTAGTGTGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGGATCAGCCCTGAACTaGTGTAGTTGGAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFGSALN*CSWNGF
Trigger: AAACCCATTCCAACTACAGCAGTTCAGGGCTGATCC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGCAACCCTTGAACATGTaGATCACCTTCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWQPLNM*ITFSEY
Trigger: GTACTCTGAGAAGGTGATGCACATGTTCAAGGGTTG...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAAGGTACTGCACCAGATaGTGGCAGCTGGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKRYCTR*WQLVVL
Trigger: CAAGACCACCAGCTGCCAGCATCTGGTGCAGTACCT...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGACTAAACTGCTGAGCTaGCTTCTGCTTTTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKTKLLS*LLLFLR
Trigger: CCTGAGGAAAAGCAGAAGGCAGCTCAGCAGTTTAGT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCTCAAGGCACTCCAGTaGACTCAGTTTCGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSLKALQ*TQFRAC
Trigger: ACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCTATCTTTCCAACTCCTaGACGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCYLSNS*TKVRSW
Trigger: CCACGAGCGCACCTTCGTGCAGGAGTTGGAAAGATA...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATGGATGGTCCCTGCCTaGTCATCCAGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKWMVPA*SSSSSS
Trigger: GGAAGAAGAGCTGGATGAGCAGGCAGGGACCATCCA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCTCCATTGCTTTCCGTaGTTTCACGGCTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSLHCFP*FHGCRT
Trigger: TGTGCGGCAGCCGTGAAAGCACGGAAAGCAATGGAG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGATGCATACTAGCAGGTaGAGCATGTATTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWMHTSR*SMYFVS
Trigger: AGACACAAAATACATGCTGCACCTGCTAGTATGCAT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATTAGGGGTCACTGCCTaGCACTTTATTTTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLLGVTA*HFIFWA
Trigger: TGCCCAGAAAATAAAGTGGCAGGCAGTGACCCCTAA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCCACAATCTCATCCCTaGACTTGCTCTCCACATTGT +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFPQSHP*TCSPHC
Trigger: ACAATGTGGAGAGCAAGTCCAGGGATGAGATTGTGG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATTGGTGCCATGGCTGTaGCCCAGGAGAAAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKLVPWL*PRRKWC
Trigger: ACACCACTTTCTCCTGGGCCACAGCCATGGCACCAA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTACCTGTAGCTTCATCTaGATGCACAGTGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPTCSFI*MHSDFF
Trigger: AAAGAAGTCACTGTGCATCCAGATGAAGCTACAGGT...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCAGCCGTCAGTCGCTaGCACTTCTTCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSAVSR*HFFLSC
Trigger: GCAGCTCAAGAAGAAGTGCCAGCGACTGACGGCTGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCAAGAGACACAACCTTCTaGGTGAACCCTGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSRDTTF*VNPAMS
Trigger: GGACATTGCAGGGTTCACCCAGAAGGTTGTGTCTCT...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGAGAAGCCTCATCCTTaGACTCTTGGGAAGAAATGT +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWEKPHP*TLGKKC
Trigger: ACATTTCTTCCCAAGAGTCCAAGGATGAGGCTTCTC...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAGTTCCAGCATCTGGATaGTCCCTGCCTGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKVPASG*SLPAHP
Trigger: TGGATGAGCAGGCAGGGACCATCCAGATGCTGGAAC...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATCTCCAGACGCAGCTTaGCCTGTTCCAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSPDAA*PVPASG
Trigger: TCCAGATGCTGGAACAGGCCAAGCTGCGTCTGGAGA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCAGCGCTGTCTTGGCTTTaGCGATGTCATCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSALSWL*RCHQSA
Trigger: TGCAGATTGATGACATCGCCAAAGCCAAGACAGCGC...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GAACAAAGCTTTTTACCCCAGGCCGGGTTATTGGAGGTTGATGTTGGAGTTTCCAACAGGCAGGAAAACTaGCGCAGCCAGGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: EQSFLPQAGLLEVDVGVSNRQEN*RSQEEK
Trigger: CTTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTT...GGAAACTCCAACATCAACCTCCAATAACCCGGCCTGGGGTAAAAAGCTTTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTTCAGGGATTATAACTaGCCACACTACAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGFRDYN*PHYRMR
Trigger: TCTCATTCTGTAGTGTGGCCAGTTATAATCCCTGAA...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATCGTCCGCAAAACCCTaGAGGATGGATACTATGATG +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLSSAKP*RMDTMM
Trigger: CATCATAGTATCCATCCTCCAGGGTTTTGCGGACGA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGCACAAAATGCAGCTTTaGCTTCTTGATGGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWHKMQL*LLDGVD
Trigger: ATCGACACCATCAAGAAGTCAAAGCTGCATTTTGTG...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTGGAACTCTTTAAGCTaGCATCATCAGAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFWNSLS*HHQKLP
Trigger: AGGCAGCTTCTGATGATGGCAGCTTAAAGAGTTCCA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAATTCCAGGCCTCTTCTaGTGCAATCTGTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLIPGLF*CNLFFC
Trigger: ACAGAAGAACAGATTGCAGCAGAAGAGGCCTGGAAT...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCAGGGTGTACAGAGCCTaGCACTTCTCCACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCRVYRA*HFSTEN
Trigger: GTTTTCTGTGGAGAAGTGGCAGGCTCTGTACACCCT...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATATCTTTCCAACTCCTaGACGAAGGTGCGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKYLSNS*TKVRSW
Trigger: CCACGAGCGCACCTTCGTGCAGGAGTTGGAAAGATA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAAGCAGTGCACAAAATaGAGCTTTGACTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSKQCTK*SFDFLM
Trigger: CATCAAGAAGTCAAAGCTGCATTTTGTGCACTGCTT...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGAAGCAGTGCACAAAATaGAGCTTTGACTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVKQCTK*SFDFLM
Trigger: CATCAAGAAGTCAAAGCTGCATTTTGTGCACTGCTT...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTTTTCCTCTAGTTGCTaGTTCAGGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFFSSSC*FRLKAS
Trigger: TGAGGCTTTCAGCCTGAAGCAGCAACTAGAGGAAAA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
49% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATCTTTTTCCTCTAGTTaGTGCTTCAGGCTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLSFSSS*CFRLKA
Trigger: GGCTTTCAGCCTGAAGCAGCAACTAGAGGAAAAAGA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACTTCTGGGTGAACCCTaGAATGTCCATGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLLLGEP*NVHVFF
Trigger: GAAAAAGACATGGACATTGCAGGGTTCACCCAGAAG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATACTCTTCCTCTAGCTaGACCTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: VETSDTHSLESAPDRRRSYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAGGTGCAGCTAGAGGAAGAGTA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTACTCTTCCTCTAGCTaGACCTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAGGTGCAGCTAGAGGAAGAGTA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTGGGCAATCTCTCGCTTaGTGGGAGCACTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSGQSLA*WEHCSS
Trigger: TGAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCC...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTATCGGGAGGTAGAGGTTaGAGTGAGTTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLSGGRG*SELRSC
Trigger: GCATGATCTCAACTCACTGCAACCTCTACCTCCCGA...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTTCTTCTTCTCAATATaGCTTTCCCAGCAACTGTAC +
Preference number: 4 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVFFFSI*LSQQLY
Trigger: GTACAGTTGCTGGGAAAGGCATATTGAGAAGAAGAA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTGCTTTTCCTCAGGCTTaGCCAGTGGCACAATCCCAA +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSAFPQA*PVAQSQ
Trigger: TTGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGC...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTTGCTCCGCAGCTGCTaGATCTCCTCGTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSLLRSC*ISSSLF
Trigger: GAACAAAGACGAGGAGATCCAGCAGCTGCGGAGCAA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCTGACTCCTCCAGCTaGTTCTTGAGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSDSSS*FLSWAI
Trigger: GATTGCCCAGCTCAAGAACCAGCTGGAGGAGTCAGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAGGTAGTAGAAGACGTTaGATGTGGCTTCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKGSRRR*MWLHWL
Trigger: CAGCCAGTGAAGCCACATTCAACGTCTTCTACTACC...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACATCTGGATGCACAGTaGCTTCTTTTTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKHLDAQ*LLFDSR
Trigger: GCGGCTGTCAAAAAGAAGTCACTGTGCATCCAGATG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR TCA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCACAAAATGCAGCTTTaGCTTCTTGATGGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKHKMQL*LLDGVD
Trigger: ATCGACACCATCAAGAAGTCAAAGCTGCATTTTGTG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTATTCTCCTGCAGCTCCTaGTTCTCTTTGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLFSCSS*FSLLAS
Trigger: AGAAGCCAACAAAGAGAAGCAGGAGCTGCAGGAGAA...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTGCCATCATCAGAAGCTaGCTTGGAAGGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSAIIRS*LGRSLV
Trigger: AACAAGGGACCTTCCAAGGCAGCTTCTGATGATGGC...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAGAGGATTATGAGTaGTTAGCACAGGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKPEDYE*LAQGLG
Trigger: ACCAAGGCCCTGTGCTAAGCACTCATAATCCTCTGG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATACTCTTCCTCTAGCTaGACCTCCATCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: GTALGLPSLVEFSGITFLYSSSS*TSICFN
Trigger: GTTAAAACAGATGGAGGTGCAGCTAGAGGAAGAGTA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCCCCACTCTAAGCTTATaGATACTAGCAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCPTLSL*ILAGAA
Trigger: TGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGG...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAAAGGGCCAGATTTaGCTTCTGCAACATCTTAGG +
Preference number: 4 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLAKGQI*LLQHLR
Trigger: CCTAAGATGTTGCAGAAGGCAAATCTGGCCCTTTGC...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCTCAGGCTTGGCCAGTaGCACAATCCCAAACACATT +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSLRLGQ*HNPKHI
Trigger: AATGTGTTTGGGATTGTGCCACTGGCCAAGCCTGAG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCTGTACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSVHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTACAGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATCTGTACACAGCGAATaGCCAGGTCCTGGATCTTTC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSVHSE*PGPGSF
Trigger: GAAAGATCCAGGACCTGGCCATTCGCTGTGTACAGA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCCTCAAACTCCTGCTaGAGCCGTTTCTTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSSNSC*SRFLVK
Trigger: CTTCACCAAGAAACGGCTCCAGCAGGAGTTTGAGGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTGGGAAGAAATGTCCTaGAGCTCTGCCTCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSWEEMS*SSASRD
Trigger: GTCTCTAGAGGCAGAGCTCCAGGACATTTCTTCCCA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATCCATCTCCTTAGAATaGGTCTGTCTCATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSISLE*VCLIRS
Trigger: GGAGCGGATGAGACAGACCCATTCTAAGGAGATGGA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR TCA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCCCTCTTAGCTGTCAATaGAGGAACAAAGCATGGAGT +
Preference number: 4 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCPLSCQ*RNKAWS
Trigger: ACTCCATGCTTTGTTCCTTCATTGACAGCTAAGAGG...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTGGATCAGCCCTGAACTaGTGTAGTTGGAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSGSALN*CSWNGF
Trigger: AAACCCATTCCAACTACAGCAGTTCAGGGCTGATCC...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTACAACCCTTGAACATGTaGATCACCTTCTCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLQPLNM*ITFSEY
Trigger: GTACTCTGAGAAGGTGATGCACATGTTCAAGGGTTG...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAAGCAGTGCACAAAATaGAGCTTTGACTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFKQCTK*SFDFLM
Trigger: CATCAAGAAGTCAAAGCTGCATTTTGTGCACTGCTT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCTTTGTTCCGGATCTaGTCCTCTGACAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSLFRI*SSDSCT
Trigger: AGTACAGCTGTCAGAGGAGCAGATCCGGAACAAAGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATCTTTGTTCCGGATCTaGTCCTCTGACAGCTGTACT +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSLFRI*SSDSCT
Trigger: AGTACAGCTGTCAGAGGAGCAGATCCGGAACAAAGA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp GAACAAAGCTTTTTACCCCAGGCCGGGTTATTGGAGGTTGATGTTGGAGTTTCCTTTTCCTCTAGTTGCTaGTTCAGGCTGAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: EQSFLPQAGLLEVDVGVSFSSSC*FRLKAS
Trigger: TGAGGCTTTCAGCCTGAAGCAGCAACTAGAGGAAAA...GGAAACTCCAACATCAACCTCCAATAACCCGGCCTGGGGTAAAAAGCTTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTACTGGTTCCCGCCCATaGTTATTCAGGAGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFTGSRP*LFRSQS
Trigger: GCTCTGACTCCTGAATAAGCATGGGCGGGAACCAGT...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTACCTGCTTCTCTTTGTTaGCTTCTTCTAGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLPASLC*LLLAEL
Trigger: AAGCTCAGCTAGAAGAAGCCAACAAAGAGAAGCAGG...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTGGGACTTCCAGTAGCTaGTGGGGCTGGAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFGTSSS*WGWNSL
Trigger: TAAAGAGTTCCAGCCCCACCAGCTACTGGAAGTCCC...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCATCCTTGGACTCTTaGGAAGAAATGTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSSLDS*EEMSWS
Trigger: GCTCCAGGACATTTCTTCCCAAGAGTCCAAGGATGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATGCCACTTTATTTTCTaGGCACAGACTGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKCHFIF*AQTGHH
Trigger: ATGGTGCCCAGTCTGTGCCCAGAAAATAAAGTGGCA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
3UTR CAA 72 bp AACAAAGCTTTTTACCCCAGGCCGGGTTATTGGAGGTaGATGTTGGAGTTTCCAGTTAACCAGAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: NKAFYPRPGYWR*MLEFPVNQRLD
Trigger: GTCAAGCCTCTGGTTAACTGGAAACTCCAACATCAACCTCCAATAACCCGGCCTGGGGTAAAAAGCTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCACACAGCAGGCAGTCATaGAATATTTCTCAACTGTTA +
Preference number: 4 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSHSRQS*NISQLL
Trigger: TAACAGTTGAGAAATATTTCATGACTGCCTGCTGTG...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCTTTTTCCTCTAGTTaGTGCTTCAGGCTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSFSSS*CFRLKA
Trigger: GGCTTTCAGCCTGAAGCAGCAACTAGAGGAAAAAGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCTTCTGGGTGAACCCTaGAATGTCCATGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSLLGEP*NVHVFF
Trigger: GAAAAAGACATGGACATTGCAGGGTTCACCCAGAAG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR GCA 90 bp TTTGTCACACTAGTCCCTAGTAGAAACAGAAAATGTACCACGCTATGTGAAAACTGGATGGTCCCTGCCTaGTCATCCAGCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FVTLVPSRNRKCTTLCENWMVPA*SSSSSS
Trigger: GGAAGAAGAGCTGGATGAGCAGGCAGGGACCATCCA...GTTTTCACATAGCGTGGTACATTTTCTGTTTCTACTAGGGACTAGTGTGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CCA 90 bp GAACAAAGCTTTTTACCCCAGGCCGGGTTATTGGAGGTTGATGTTGGAGTTTCCACCTGTAGCTTCATCTaGATGCACAGTGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: EQSFLPQAGLLEVDVGVSTCSFI*MHSDFF
Trigger: AAAGAAGTCACTGTGCATCCAGATGAAGCTACAGGT...GGAAACTCCAACATCAACCTCCAATAACCCGGCCTGGGGTAAAAAGCTTTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR TCA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATACAGGTCTCCTCATTaGATCCTCATAACAACACAC +
Preference number: 4 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKYRSPH*ILITTH
Trigger: GTGTGTTGTTATGAGGATTCAATGAGGAGACCTGTA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CCA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTCCACAATCTCATCCCTaGACTTGCTCTCCACATTGT +
Preference number: 4 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFPQSHP*TCSPHC
Trigger: ACAATGTGGAGAGCAAGTCCAGGGATGAGATTGTGG...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR GCA 90 bp TTTGTCACACTAGTCCCTAGTAGAAACAGAAAATGTACCACGCTATGTGAAAACTCCAGCCGTTTCACTTaGGTCCTTTCAAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: FVTLVPSRNRKCTTLCENSSRFT*VLSNSR
Trigger: CCTGGAGTTTGAAAGGACGCAAGTGAAACGGCTGGA...GTTTTCACATAGCGTGGTACATTTTCTGTTTCTACTAGGGACTAGTGTGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS GCA 90 bp TTCGCCAGAGCCCCGCCGCGTGGCCGAGGAGGCCCGGCTGACCGGTaGAGAGACGGTGGAGGCCGGGCTGAAGTCGGAGCCCCACCGCTT +
Preference number: 5 (lower is better)
Translates to: FARAPPRGRGGPADR*RDGGGRAEVGAPPL
Trigger: AAGCGGTGGGGCTCCGACTTCAGCCCGGCCTCCACCGTCTCTGCACCGGTCAGCCGGGCCTCCTCGGCCACGCGGCGGGGCTCTGGCGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS GCA 90 bp CCACTGCCGAGGCAGAGCTGCGTGGCCGGGGTGGCACCGACAGACTaGGGGCCAGCGACGGGTGGCTGTACTGCGAGCAGGCCTCGCTCA +
Preference number: 5 (lower is better)
Translates to: PLPRQSCVAGVAPTD*GPATGGCTASRPRS
Trigger: TGAGCGAGGCCTGCTCGCAGTACAGCCACCCGTCGCTGGCCCGCAGTCTGTCGGTGCCACCCCGGCCACGCAGCTCTGCCTCGGCAGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS GCA 90 bp AGCGGACGCTGGAGCTGGGAGGCTCATCCACTGCCGAGGCAGAGCTaGGTGGCCGGGGTGGCACCGACAGACTGCGGGCCAGCGACGGGT +
Preference number: 5 (lower is better)
Translates to: SGRWSWEAHPLPRQS*VAGVAPTDCGPATG
Trigger: ACCCGTCGCTGGCCCGCAGTCTGTCGGTGCCACCCCGGCCACGCAGCTCTGCCTCGGCAGTGGATGAGCCTCCCAGCTCCAGCGTCCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS GCA 90 bp AGCTGCTCCTTCCGCTCCTTCGCCGGCTCCGGCTCTTCCGGCCGCTaGGGGACCGGGACACATCAGCAGCAGAGGCGGAGCGGCGGATGC +
Preference number: 5 (lower is better)
Translates to: SCSFRSFAGSGSSGR*GTGTHQQQRRSGGC
Trigger: GCATCCGCCGCTCCGCCTCTGCTGCTGATGTGTCCCGGTCCCGCAGCGGCCGGAAGAGCCGGAGCCGGCGAAGGAGCGGAAGGAGCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 90 bp GACGCTGGAGCTGGGAGGCTCATCCACTGCCGAGGCAGAGCTGCGTaGCCGGGGTGGCACCGACAGACTGCGGGCCAGCGACGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: DAGAGRLIHCRGRAA*PGWHRQTAGQRRVA
Trigger: AGCCACCCGTCGCTGGCCCGCAGTCTGTCGGTGCCACCCCGGCCACGCAGCTCTGCCTCGGCAGTGGATGAGCCTCCCAGCTCCAGCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 90 bp GCTGGGAGGCTCATCCACTGCCGAGGCAGAGCTGCGTGGCCGGGGTaGCACCGACAGACTGCGGGCCAGCGACGGGTGGCTGTACTGCGA +
Preference number: 5 (lower is better)
Translates to: AGRLIHCRGRAAWPG*HRQTAGQRRVAVLR
Trigger: TCGCAGTACAGCCACCCGTCGCTGGCCCGCAGTCTGTCGGTGCCACCCCGGCCACGCAGCTCTGCCTCGGCAGTGGATGAGCCTCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 90 bp GGACCACACGCCGACAGGCCTGGCCCTCGGGGCCCCGATCCAGCATaGTTGTGCGCCGCAGGGAGAAGCCAAAGTCTCCAGTGGGCCGTC +
Preference number: 5 (lower is better)
Translates to: GPHADRPGPRGPDPA*LCAAGRSQSLQWAV
Trigger: GACGGCCCACTGGAGACTTTGGCTTCTCCCTGCGGCGCACAACCATGCTGGATCGGGGCCCCGAGGGCCAGGCCTGTCGGCGTGTGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CCA 90 bp GTGCCTGCACCAGGCTCAGCAAAGTGGACCACACGCCGACAGGCCTaGCCCTCGGGGCCCCGATCCAGCATGGTTGTGCGCCGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: VPAPGSAKWTTRRQA*PSGPRSSMVVRRRE
Trigger: CTCCCTGCGGCGCACAACCATGCTGGATCGGGGCCCCGAGGGCCAGGCCTGTCGGCGTGTGGTCCACTTTGCTGAGCCTGGTGCAGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 90 bp CACGCCGACAGGCCTGGCCCTCGGGGCCCCGATCCAGCATGGTTGTaGGCCGCAGGGAGAAGCCAAAGTCTCCAGTGGGCCGTCGTTGCA +
Preference number: 5 (lower is better)
Translates to: HADRPGPRGPDPAWL*AAGRSQSLQWAVVA
Trigger: TGCAACGACGGCCCACTGGAGACTTTGGCTTCTCCCTGCGGCGCACAACCATGCTGGATCGGGGCCCCGAGGGCCAGGCCTGTCGGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 90 bp GGGGCTCGGGATCGGTGCCCTGGTCGAGGGATGCCTGGGCCAGGATaGTGCACCAGCTGTCCCTCTAGAGTCCTCACCTCCACCTGTGGC +
Preference number: 5 (lower is better)
Translates to: GARDRCPGRGMPGPG*CTSCPSRVLTSTCG
Trigger: GCCACAGGTGGAGGTGAGGACTCTAGAGGGACAGCTGGTGCAGCATCCTGGCCCAGGCATCCCTCGACCAGGGCACCGATCCCGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 90 bp TCTCCCCCTTCCCAGAAGACTGCTTGCCGCGGGCCTTGTGCTCCTTaGCCCTGCCCCGAGACATCAGGCTCCGCAGGCCCAGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: SPPSQKTACRGPCAP*PCPETSGSAGPGRA
Trigger: AGCTCTCCCTGGGCCTGCGGAGCCTGATGTCTCGGGGCAGGGGCAAGGAGCACAAGGCCCGCGGCAAGCAGTCTTCTGGGAAGGGGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS CCA 90 bp TGGCAGCTCCCGGGCCGTTCATGGCGAGTGTGGGTGCAGGGCTCCTaGCTCTCTGGGAAGTCTCTGGGGGTATCGGGCTGGTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: WQLPGRSWRVWVQGS*LSGKSLGVSGWWEA
Trigger: AGCCTCCCACCAGCCCGATACCCCCAGAGACTTCCCAGAGAGCCAGGAGCCCTGCACCCACACTCGCCATGAACGGCCCGGGAGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS GCA 90 bp GCTCGGGATCGGTGCCCTGGTCGAGGGATGCCTGGGCCAGGATGCTaGACCAGCTGTCCCTCTAGAGTCCTCACCTCCACCTGTGGCGAG +
Preference number: 5 (lower is better)
Translates to: ARDRCPGRGMPGPGC*TSCPSRVLTSTCGE
Trigger: CTCGCCACAGGTGGAGGTGAGGACTCTAGAGGGACAGCTGGTGCAGCATCCTGGCCCAGGCATCCCTCGACCAGGGCACCGATCCCGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 90 bp GCCTTCTGCTGTGGCAGCTCCCGGGCCGTTCATGGCGAGTGTGGGTaGAGGGCTCCTGGCTCTCTGGGAAGTCTCTGGGGGTATCGGGCT +
Preference number: 5 (lower is better)
Translates to: AFCCGSSRAVHGECG*RAPGSLGSLWGYRA
Trigger: AGCCCGATACCCCCAGAGACTTCCCAGAGAGCCAGGAGCCCTGCACCCACACTCGCCATGAACGGCCCGGGAGCTGCCACAGCAGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCCTTGGTGCCCCACTTaGCTGCGGCCACCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLPWCPT*LRPPEP
Trigger: GGGCTCCGGTGGCCGCAGCAAAGTGGGGCACCAAGG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CACCAGGGAGACGAGAAGGGTGAAGAGCTCGCTGTAGAGGCCGGCCGCCATGCCGCTTCAGCAGCTTCTTaGGTGGCTCCCGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: HQGDEKGEELAVEAGRHAASAAS*VAPAAP
Trigger: GGGGGCTGCGGGAGCCACCAAAGAAGCTGCTGAAGC...GGCATGGCGGCCGGCCTCTACAGCGAGCTCTTCACCCTTCTCGTCTCCCTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS GCA 90 bp CCCTCTAGAGTCCTCACCTCCACCTGTGGCGAGGGGGCGGCAGAGTaGTCTGAGGGCGTCGAGGTTTCTGAGGCGCTCTCATCCCGGCTA +
Preference number: 5 (lower is better)
Translates to: PSRVLTSTCGEGAAE*SEGVEVSEALSSRL
Trigger: TAGCCGGGATGAGAGCGCCTCAGAAACCTCGACGCCCTCAGAGCACTCTGCCGCCCCCTCGCCACAGGTGGAGGTGAGGACTCTAGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 90 bp CTCCGCAGCCAGCTCCTGCTGAGCTCGCTGAGCTCTGGAATGGGCTaGACCTTGAGCCGCACGCTGTCCCCTGACTGCCGGATCATCTCC +
Preference number: 5 (lower is better)
Translates to: LRSQLLLSSLSSGMG*TLSRTLSPDCRIIS
Trigger: GGAGATGATCCGGCAGTCAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTCCAGAGCTCAGCGAGCTCAGCAGGAGCTGGCTGCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CCA 90 bp CATGGCGAGTGTGGGTGCAGGGCTCCTGGCTCTCTGGGAAGTCTCTaGGGGTATCGGGCTGGTGGGAGGCTGAGGACTCCTAGATGGGCC +
Preference number: 5 (lower is better)
Translates to: HGECGCRAPGSLGSL*GYRAGGRLRTPRWA
Trigger: GGCCCATCTAGGAGTCCTCAGCCTCCCACCAGCCCGATACCCCCAGAGACTTCCCAGAGAGCCAGGAGCCCTGCACCCACACTCGCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCCTTGGTGCCCCACTTaGCTGCGGCCACCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPPWCPT*LRPPEP
Trigger: GGGCTCCGGTGGCCGCAGCAAAGTGGGGCACCAAGG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCTGAGGGTGGCGAGCTaGCCCTCCAGCTCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFLRVAS*PSSSRF
Trigger: GAAGCGGGAGCTGGAGGGCAAGCTCGCCACCCTCAG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCCACTCACTGCAGGTTACCTTaGGTGGCTCCCGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: YAAFWAHSWRANCLRPATHCRLP*VAPAAP
Trigger: GGGGGCTGCGGGAGCCACCAAAGGTAACCTGCAGTG...AGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS TCA 90 bp CTGCCCGCTGCAGCACCGAGCCACGGAAGCTACCCTCCTCACCCTTaGGGTCATCGCTGGAGCTGGCTGTACTTAGGTGGCCCGAGTCCA +
Preference number: 5 (lower is better)
Translates to: LPAAAPSHGSYPPHP*GHRWSWLYLGGPSP
Trigger: TGGACTCGGGCCACCTAAGTACAGCCAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTAGCTTCCGTGGCTCGGTGCTGCAGCGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 90 bp GCTCCTGCCTCCTGCTTCACACCAGGGACTGGTGACTTGGACTGCTaGTCTCCAGTGAGGTCTGACTTCGGGCCGGTGGAGCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: APASCFTPGTGDLDC*SPVRSDFGPVEPGV
Trigger: GACCCCAGGCTCCACCGGCCCGAAGTCAGACCTCACTGGAGAGCAGCAGTCCAAGTCACCAGTCCCTGGTGTGAAGCAGGAGGCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS GCA 90 bp GCAGCTCCTGCCTCCTGCTTCACACCAGGGACTGGTGACTTGGACTaGTGCTCTCCAGTGAGGTCTGACTTCGGGCCGGTGGAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: AAPASCFTPGTGDLD*CSPVRSDFGPVEPG
Trigger: CCCAGGCTCCACCGGCCCGAAGTCAGACCTCACTGGAGAGCAGCAGTCCAAGTCACCAGTCCCTGGTGTGAAGCAGGAGGCAGGAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS CCA 90 bp TCCCTCACAGTTCGTGCTTCTTGCGGCTCGCCTCGGCCTCCTTCCTaGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: SLTVRASCGSPRPPS*QARPSPPWCPGAAS
Trigger: AGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGTGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531438.5
CDS CCA 90 bp GCGGCCTCAGAGTCCAGAGAAGCTGTGAAGATCCTCTCCAGCCGCTaGTGGGCCTCTTCCACGGGGGTCAGCTGGACCTTGGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: AASESREAVKILSSR*WASSTGVSWTLAAP
Trigger: AGGAGCTGCCAAGGTCCAGCTGACCCCCGTGGAAGAGGCCCACCAGCGGCTGGAGAGGATCTTCACAGCTTCTCTGGACTCTGAGGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS CCA 90 bp TTCTCCCCAGTTCGTGCTTCTTGCGGCTCGCCTCGGCCTCCTTCCTaGCAAGCTCGCCCATCTCCTCCTTGGTGTCCCGGAGCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: FSPVRASCGSPRPPS*QARPSPPWCPGAAS
Trigger: AGAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGAGCTTGCCAGGAAGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGGGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531892.5
CDS CCA 90 bp TCCAGGCTGCAGCCCAGTAGGTACGCAGCCTTCTGGGCCCACTCATaGCGGGCAAACTGCTTGCGCCCAGCCACTGCAGGTTTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SRLQPSRYAAFWAHS*RANCLRPATAGLVA
Trigger: AGCCACCAAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACTGGGCTGCAGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTCGCCCATCTCCTCCTaGGTGTCCCGGAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFSPISS*VSRSCL
Trigger: GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTCCAGTTCGTGCTTCTaGCGGCTCGCCTCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPSSSCF*RLASAS
Trigger: GGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGGA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTCCAGTGGGCCGTCGTaGCAGCTCCAGCTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSSGPS*QLQLPE
Trigger: CTCCGGGAGCTGGAGCTGCAACGACGGCCCACTGGA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCAGTGGGCCGTCGTaGCAGCTCCAGCTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPSSGPS*QLQLPE
Trigger: CTCCGGGAGCTGGAGCTGCAACGACGGCCCACTGGA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCCCGATCCAGCATGGTaGTGCGCCGCAGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFPDPAW*CAAGRS
Trigger: GCTTCTCCCTGCGGCGCACAACCATGCTGGATCGGG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCCCGATCCAGCATGGTaGTGCGCCGCAGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLPDPAW*CAAGRS
Trigger: GCTTCTCCCTGCGGCGCACAACCATGCTGGATCGGG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCGGAATGGGCTGCACCTaGAGCCGCACGCTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFGMGCT*SRTLSP
Trigger: AGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTCC...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCTTTACGCCCGTGTTTCTaGGTCAGGTGCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RYAAFWAHSWRANCLRPALRPCF*VRCGAR
Trigger: CCTGGCCCCGCACCTGACCAAGAAACACGGGCGTAA...AGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp CCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCTGGCGGGCAAACTGCTaGCGCCCAGCCACTGCAGGT +
Preference number: 5 (lower is better)
Translates to: PPCPQGTPVHSVSGLSHLWRANC*RPATAG
Trigger: ACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCA...GAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS CCA 90 bp CCCAGAACAAATGACCCATCATCCTGGCACTATCAGTCCAGGCCCTaGCCTGCGTGCACTCTGCCCCCTTCAGGCCCCAGGGAAGGACCC +
Preference number: 5 (lower is better)
Translates to: PRTNDPSSWHYQSRP*PACTLPPSGPREGP
Trigger: GGGTCCTTCCCTGGGGCCTGAAGGGGGCAGAGTGCACGCAGGCCAGGGCCTGGACTGATAGTGCCAGGATGATGGGTCATTTGTTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529578.5
CDS CCA 90 bp CCTCTTGCTTCGAGTCGGGTGCTCGGGGGACTTGACTCCTCTGCCTaGGGTCTCCTTGGCATTCCCAAGCTCCTCGCTGGGCAGCACCTT +
Preference number: 5 (lower is better)
Translates to: PLASSRVLGGLDSSA*GLLGIPKLLAGQHL
Trigger: AAGGTGCTGCCCAGCGAGGAGCTTGGGAATGCCAAGGAGACCCCAGGCAGAGGAGTCAAGTCCCCCGAGCACCCGACTCGAAGCAAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS-3UTR CAA 90 bp CTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCCACTGCAGGTTAGGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LLGPLMAGKLLAPSHCRLGHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCC...TAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR CAA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTTACGCCCGTGTTTCTaGGTCAGGTGCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPLRPCF*VRCGAR
Trigger: CCTGGCCCCGCACCTGACCAAGAAACACGGGCGTAA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCCGCCTTCTCGAGCTaGCTCCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSAFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTTACGCCCGTGTTTCTTGGTCAGGTGCGGGGCCAGGACATCAAAGCGGCGGCGCGTTCCAGCTGCCTCTaGTTCTGCTGCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: VTPVFLGQVRGQDIKAAARSSCL*FCCSTS
Trigger: GGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGAACG...CGCCGCCGCTTTGATGTCCTGGCCCCGCACCTGACCAAGAAACACGGGCGTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCCCCTCCAGGTGCAGCTaGGTGTCTTGCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLPSRCS*VSCSSA
Trigger: GGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGG...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTTCTCCAGTTCGTGGTaGCGGACCTGCTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPFSSSW*RTCWPS
Trigger: GGAGGGCCAGCAGGTCCGCAACCACGAACTGGAGAA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTTCTCCAGTTCGTGGTaGCGGACCTGCTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: PRRESPHPTREGRHCFSSFSSSW*RTCWPS
Trigger: GGAGGGCCAGCAGGTCCGCAACCACGAACTGGAGAA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCATCTCCAGACGCAGCTaGGCCTGTTCCAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: RPAAMPSRHSSALSFGPVISRRS*ACSSIW
Trigger: CCAGATGCTGGAACAGGCCAAGCTGCGTCTGGAGAT...GACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS TCA 90 bp CTGGCTCTCTGGGAAGTCTCTGGGGGTATCGGGCTGGTGGGAGGCTaGGGACTCCTAGATGGGCCACTGCCTTCCTTTGAGCTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: LALWEVSGGIGLVGG*GLLDGPLPSFELPS
Trigger: AGAGGGCAGCTCAAAGGAAGGCAGTGGCCCATCTAGGAGTCCTCAGCCTCCCACCAGCCCGATACCCCCAGAGACTTCCCAGAGAGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS GCA 90 bp CTCCTCCCCAGCCTCACCCGCCGTTCCAGCTGCCTCTTGTTCTGCTaGTCCACCTCCAGCTTGTCCTCAAACTCCTGCTGGAGCCGTTTC +
Preference number: 5 (lower is better)
Translates to: LLPSLTRRSSCLLFC*STSSLSSNSCWSRF
Trigger: GAAACGGCTCCAGCAGGAGTTTGAGGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGAACGGCGGGTGAGGCTGGGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530557.2
ENST00000533652.1
CDS GCA 90 bp GTTTTCGCCTCCTGCTTCACACCAGGGACTGGTGACTTGGACTGCTaGTCTCCAGTGAGGTCTGACTTCGGGCCGGTGGAGCCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: VFASCFTPGTGDLDC*SPVRSDFGPVEPGV
Trigger: GACCCCAGGCTCCACCGGCCCGAAGTCAGACCTCACTGGAGAGCAGCAGTCCAAGTCACCAGTCCCTGGTGTGAAGCAGGAGGCGAAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531267.5
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCTGCTCACCAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTGGTGAGCAG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCCTACCCTCCTCACCCTaGAGGTCATCGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PRRESPHPTREGRHCFSSLPSSP*RSSLEL
Trigger: CAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTAG...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCTACCCTCCTCACCCTaGAGGTCATCGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFLPSSP*RSSLEL
Trigger: CAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTAG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAATGGGCTGCACCTaGAGCCGCACGCTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGGMGCT*SRTLSP
Trigger: AGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTCC...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTGGCAGCTGGTGGTCTaGCCACTGCCACTACTGCCC +
Preference number: 5 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTWQLVV*PLPLLP
Trigger: GGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCCA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCCACTGCAGGTTACCTTGCAGGGTGCCACCCTaGTGCTGGTGCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: LGPLMAGKLLAPSHCRLPCRVPP*CWCLKM
Trigger: CATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCA...AGGTAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR CAA 90 bp TCGGGGCCCTGGCGGAAGGAGGTGGAGCGCTGCAGGGTGCCACCCTTGTGCTGGTCGATGTTCTCCTCCTaGTATCTTTCCAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: SGPWRKEVERCRVPPLCWSMFSS*YLSNSC
Trigger: GCAGGAGTTGGAAAGATACAAGGAGGAGAACATCGA...CCAGCACAAGGGTGGCACCCTGCAGCGCTCCACCTCCTTCCGCCAGGGCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCATCCACTTCCCCGTaGATCTCCGCTGCCCGGATG +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSSTSP*ISAARM
Trigger: CATCCGGGCAGCGGAGATCAACGGGGAAGTGGATGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTGCTGGAGCCGTTTCTaGGTGAAGTCCACCTCCCGC +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFCWSRF*VKSTSR
Trigger: GCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCAGCACCCGCTGGCACTTCTTCTaGAGCTGCTGCAGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: AARMNQQAFCSSGEMPSTRWHFF*SCCRAR
Trigger: GCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGCG...GGTGCTGGGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCCGCTGGCACTTCTTCTaGAGCTGCTGCAGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPRWHFF*SCCRAR
Trigger: GCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGCG...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCGTGCAGCTTGGTGTCTaGCAGCTCAGCCGTCAGTCG +
Preference number: 5 (lower is better)
Translates to: CPQGTPVHSVSGLSHLPGVQLGV*QLSRQS
Trigger: CGACTGACGGCTGAGCTGCAAGACACCAAGCTGCAC...GCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS TCA 90 bp CTGGCGCAAGGTGTGCAGGACGCTGGACTCATTGAGGTACACCAGTaGGGCCAGATCCTCCAGACGGTCGCAGGAGGGAGCATTAGCCTG +
Preference number: 5 (lower is better)
Translates to: LAQGVQDAGLIEVHQ*GQILQTVAGGSISL
Trigger: CAGGCTAATGCTCCCTCCTGCGACCGTCTGGAGGATCTGGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCCTGCACACCTTGCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528322.6
CDS GCA 90 bp ATCTGTGAGTTCTGCTTGGCCAGTGAGCCGAACTTGGCTGCCCGCTaGAGCACCGAGCCACGGAAGCTACCCTCCTCACCCTTGAGGTCA +
Preference number: 5 (lower is better)
Translates to: ICEFCLASEPNLAAR*STEPRKLPSSPLRS
Trigger: TGACCTCAAGGGTGAGGAGGGTAGCTTCCGTGGCTCGGTGCTGCAGCGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 90 bp TCGACTGGGAACTTTTTAGTCACTAGCTCAGGGGCTCGGGATCGGTaGCCTGGTCGAGGGATGCCTGGGCCAGGATGCTGCACCAGCTGT +
Preference number: 5 (lower is better)
Translates to: STGNFLVTSSGARDR*PGRGMPGPGCCTSC
Trigger: ACAGCTGGTGCAGCATCCTGGCCCAGGCATCCCTCGACCAGGGCACCGATCCCGAGCCCCTGAGCTAGTGACTAAAAAGTTCCCAGTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 90 bp TCTGTTTTCGCCTCCTGCTTCACACCAGGGACTGGTGACTTGGACTaGTGCTCTCCAGTGAGGTCTGACTTCGGGCCGGTGGAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SVFASCFTPGTGDLD*CSPVRSDFGPVEPG
Trigger: CCCAGGCTCCACCGGCCCGAAGTCAGACCTCACTGGAGAGCAGCAGTCCAAGTCACCAGTCCCTGGTGTGAAGCAGGAGGCGAAAACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531267.5
CDS GCA 90 bp CTCCTTCCTCGACGGCCGGTGCGTCTGCCCAGTTTCTTCACTTTCTaGAGCTGGGCCCTTCTTCACACTGGAGCAGCTGTGGCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: LLPRRPVRLPSFFTF*SWALLHTGAAVAGD
Trigger: GTCTCCAGCCACAGCTGCTCCAGTGTGAAGAAGGGCCCAGCTGCAGAAAGTGAAGAAACTGGGCAGACGCACCGGCCGTCGAGGAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 90 bp CCCTCCTCACCCTTGAGGTCATCGCTGGAGCTGGCTGTACTTAGGTaGCCCGAGTCCAGGATGACGCTGCCCCGGTTACTATCGGAGTCA +
Preference number: 5 (lower is better)
Translates to: PSSPLRSSLELAVLR*PESRMTLPRLLSES
Trigger: TGACTCCGATAGTAACCGGGGCAGCGTCATCCTGGACTCGGGCCACCTAAGTACAGCCAGCTCCAGCGATGACCTCAAGGGTGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CCA 90 bp CACTTTCTGCAGCTGGGCCCTTCTTCACACTGGAGCAGCTGTGGCTaGAGACGGTCGAGCCGCTGGATGACGACGAGGAGGACTCAGACT +
Preference number: 5 (lower is better)
Translates to: HFLQLGPSSHWSSCG*RRSSRWMTTRRTQT
Trigger: AGTCTGAGTCCTCCTCGTCGTCATCCAGCGGCTCGACCGTCTCCAGCCACAGCTGCTCCAGTGTGAAGAAGGGCCCAGCTGCAGAAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CAA 90 bp TGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACTCGCCCATCTCCTCCTaGGTGTCCCGGAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: WEYRGLEVLSRGSCSSSDSPISS*VSRSCL
Trigger: GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGA...GTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGTCGCCCATCTCCTCCTaGGTGTCCCGGAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWSPISS*VSRSCL
Trigger: GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGA...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCCAGTTCGTGCTTCTaGCGGCTCGCCTCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EYRGLEVLSRGSCSSSDRSSSCF*RLASAS
Trigger: GGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGGA...TCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp CAGTTCGTGGTTGCGGACCTGCTGGCCCTCCAGGTGCAGCTTGGTGTCTTGCAGAGGACGCTGGACTCATaGAGGTACACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: QFVVADLLALQVQLGVLQRTLDS*RYTSEA
Trigger: GGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCCT...CTGCAAGACACCAAGCTGCACCTGGAGGGCCAGCAGGTCCGCAACCACGAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCAGGACGCTGGACTCATaGAGGTACACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: PRRESPHPTREGRHCFSSRTLDS*RYTSEA
Trigger: GGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCCT...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGAGGAGCGGTTCAGGTaGAAGAAGCCACGTCGCAGG +
Preference number: 5 (lower is better)
Translates to: EEGQGVSHADQQSGGGDREERFR*KKPRRR
Trigger: CCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCTC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCCCGATCCAGCATGGTaGTGCGCCGCAGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGPDPAW*CAAGRS
Trigger: GCTTCTCCCTGCGGCGCACAACCATGCTGGATCGGG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGGGAATGGGCTGCACCTaGAGCCGCACGCTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWGMGCT*SRTLSP
Trigger: AGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTCC...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCCACAGAAAACACCTaGTTCCCGCTGATGCCCGCG +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSTENT*FPLMPA
Trigger: CGCGGGCATCAGCGGGAACAAGGTGTTTTCTGTGGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGGHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCC...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCCACTGCAGGTTACCTTTCTCTGCCAAGTGGTaGAGGTGGAGCTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LGPLMAGKLLAPSHCRLPFSAKW*RWSSVL
Trigger: CAGGACAGAGCTCCACCTCAACCACTTGGCAGAGAA...AGGTAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR CAA 90 bp GATCTTTCTCTTCTTGAAGTGCTGGCGGGCCAGGTAGCCCCTGCAGGCTGCTTGTGGCGGGCAAACTGCTaGCGCCCAGCTTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: DLSLLEVLAGQVAPAGCLWRANC*RPASAA
Trigger: AGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCA...CAAGCAGCCTGCAGGGGCTACCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCCCTTGTGCTGGTGCTaGAAGATGGCTGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFPLCWC*KMAEDS
Trigger: GCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGGG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCCCCTTGTGCTGGTGCTaGAAGATGGCTGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: CPQGTPVHSVSGLSHLPGPLCWC*KMAEDS
Trigger: GCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGGG...GCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CAA 90 bp AGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCATGCAGGGTGCCACCCTaGTGCTGGTGCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: SRYAAFWAHSWRANCLRPCRVPP*CWCLKM
Trigger: CATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCA...TGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTGCAGGGTGCCACCCTaGTGCTGGTGCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFCRVPP*CWCLKM
Trigger: CATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGTGGTCAGGGTAACCTaGGCGGTACATGCGCATGGC +
Preference number: 5 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRVVRVT*AVHAHG
Trigger: GCCATGCGCATGTACCGCCAAGGTTACCCTGACCAC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTTACGCCCGTGTTTCTaGGTCAGGTGCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTLRPCF*VRCGAR
Trigger: CCTGGCCCCGCACCTGACCAAGAAACACGGGCGTAA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTCCGCCTTCTCGAGCTaGCTCCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSAFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGGA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTCCAGCCGGTCACTGTaGAGCCGCAGCTCGTTCCTC +
Preference number: 5 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGSSRSL*SRSSFL
Trigger: GAGGAACGAGCTGCGGCTCAACAGTGACCGGCTGGA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCGCTGGCACTTCTTCTaGAGCTGCTGCAGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTRWHFF*SCCRAR
Trigger: GCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGCG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACCCCTCCAGGTGCAGCTaGGTGTCTTGCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNPSRCS*VSCSSA
Trigger: GGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGG...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTTCTCCAGTTCGTGGTaGCGGACCTGCTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNFSSSW*RTCWPS
Trigger: GGAGGGCCAGCAGGTCCGCAACCACGAACTGGAGAA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCCCGGAGCTGTTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAACAGCTCCGGGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCTGAGGGTGGCGAGCTaGCCCTCCAGCTCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSLRVAS*PSSSRF
Trigger: GAAGCGGGAGCTGGAGGGCAAGCTCGCCACCCTCAG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCCTCCAGCTGGTTCTaGAGCTGGGCAATCTCTCGC +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSSSWF*SWAISR
Trigger: GCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTCCTCCAGCTGGTTCTaGAGCTGGGCAATCTCTCGC +
Preference number: 5 (lower is better)
Translates to: PRRESPHPTREGRHCFSSSSSWF*SWAISR
Trigger: GCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGGA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCCTTGGTGCCCCACTTaGCTGCTCCCTGAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSPWCPT*LLPERP
Trigger: CGGCCGCTCAGGGAGCAGCAAAGTGGGGCACCAAGG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533112.5
CDS TCA 90 bp GCCTGCTTCAAGTACTTTCCGGTCATGGGGGTGCTACCTGAGGGCTaGCACAGGCTGCCAGAGCCTTTTCCGCTCTGTTGCTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: ACFKYFPVMGVLPEG*HRLPEPFPLCCCWA
Trigger: AGCCCAGCAGCAACAGAGCGGAAAAGGCTCTGGCAGCCTGTGTCAGCCCTCAGGTAGCACCCCCATGACCGGAAAGTACTTGAAGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527312.5
CDS TCA 90 bp GCTGAGCTCTGGAATGGGCTGCACCTTGAGCCGCACGCTGTCCCCTaGCTGCCGGATCATCTCCACAATCTCATCCCTGGACTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: AELWNGLHLEPHAVP*LPDHLHNLIPGLAL
Trigger: GAGAGCAAGTCCAGGGATGAGATTGTGGAGATGATCCGGCAGTCAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTCCAGAGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CCA 90 bp CCTTCTTCACACTGGAGCAGCTGTGGCTGGAGACGGTCGAGCCGCTaGATGACGACGAGGAGGACTCAGACTCCGTCTCCGTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: PSSHWSSCGWRRSSR*MTTRRTQTPSPFSF
Trigger: GAAAGAGAACGGAGACGGAGTCTGAGTCCTCCTCGTCGTCATCCAGCGGCTCGACCGTCTCCAGCCACAGCTGCTCCAGTGTGAAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 90 bp TCTTCACTTTCTGCAGCTGGGCCCTTCTTCACACTGGAGCAGCTGTaGCTGGAGACGGTCGAGCCGCTGGATGACGACGAGGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: SSLSAAGPFFTLEQL*LETVEPLDDDEEDS
Trigger: TGAGTCCTCCTCGTCGTCATCCAGCGGCTCGACCGTCTCCAGCCACAGCTGCTCCAGTGTGAAGAAGGGCCCAGCTGCAGAAAGTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 90 bp TCTGCCCAGTTTCTTCACTTTCTGCAGCTGGGCCCTTCTTCACACTaGAGCAGCTGTGGCTGGAGACGGTCGAGCCGCTGGATGACGACG +
Preference number: 5 (lower is better)
Translates to: SAQFLHFLQLGPSSH*SSCGWRRSSRWMTT
Trigger: CGTCGTCATCCAGCGGCTCGACCGTCTCCAGCCACAGCTGCTCCAGTGTGAAGAAGGGCCCAGCTGCAGAAAGTGAAGAAACTGGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CAA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTCTGCTCACCAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: KKVRVFPMQISSRVGETGLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTGGTGAGCAG...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAATCGCCCATCTCCTCCTaGGTGTCCCGGAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKSPISS*VSRSCL
Trigger: GAGGCAGCTCCGGGACACCAAGGAGGAGATGGGCGA...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTCCAGTTCGTGCTTCTaGCGGCTCGCCTCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSSSCF*RLASAS
Trigger: GGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGGA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCAGGACGCTGGACTCATaGAGGTACACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPRTLDS*RYTSEA
Trigger: GGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCCT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCGTCTTGGATTCACGCTaGGAGGAGCGGTTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPVLDSR*EERFRL
Trigger: CAACCTGAACCGCTCCTCCAAGCGTGAATCCAAGAC...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGAGCCGCTGGCCACCTaGATGGGGATGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLEPLAT*MGMGLE
Trigger: CTCCAACCCCATCCCCATCAAGGTGGCCAGCGGCTC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCTACCCTCCTCACCCTaGAGGTCATCGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTLPSSP*RSSLEL
Trigger: CAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTAG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGTCCAGTGGGCCGTCGTaGCAGCTCCAGCTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLSSGPS*QLQLPE
Trigger: CTCCGGGAGCTGGAGCTGCAACGACGGCCCACTGGA...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCCCGATCCAGCATGGTaGTGCGCCGCAGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSPDPAW*CAAGRS
Trigger: GCTTCTCCCTGCGGCGCACAACCATGCTGGATCGGG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAGGAATGGGCTGCACCTaGAGCCGCACGCTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: LFHVETSDTHSLESAPDRGMGCT*SRTLSP
Trigger: AGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTCC...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGCAGCTGGTGGTCTaGCCACTGCCACTACTGCCC +
Preference number: 5 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGWQLVV*PLPLLP
Trigger: GGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCCA...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTCCACAGAAAACACCTaGTTCCCGCTGATGCCCGCG +
Preference number: 5 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTSTENT*FPLMPA
Trigger: CGCGGGCATCAGCGGGAACAAGGTGTTTTCTGTGGA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCCAGCACCTTGGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SQNEPAGLLFIGGDAQHLGHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCC...AAGGTGCTGGGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGGGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGGHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCC...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTTCTCTGCCAAGTGGTaGAGGTGGAGCTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPFSAKW*RWSSVL
Trigger: CAGGACAGAGCTCCACCTCAACCACTTGGCAGAGAA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCCACTGCAGGTTACCTTTGCTTTTCCTCAGGCTaGGCCAGTGGCACAATCCCA +
Preference number: 5 (lower is better)
Translates to: WAHSWRANCLRPATAGYLCFSSG*ASGTIP
Trigger: TGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGCA...AAGGTAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGCTTCAGCAGCTTCTTaGGTGGCTCCCGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVASAAS*VAPAAP
Trigger: GGGGGCTGCGGGAGCCACCAAAGAAGCTGCTGAAGC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGCTTCAGCAGCTTCTTaGGTGGCTCCCGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPASAAS*VAPAAP
Trigger: GGGGGCTGCGGGAGCCACCAAAGAAGCTGCTGAAGC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTGCAGGGTGCCACCCTaGTGCTGGTGCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPCRVPP*CWCLKM
Trigger: CATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTGCAGGGTGCCACCCTaGTGCTGGTGCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTCRVPP*CWCLKM
Trigger: CATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGGGCTTTGGCCTTTTTaGTCACCTTCCTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPGLWPF*SPSWGP
Trigger: TGGCCCCCAGGAAGGTGACAAAAAAGGCCAAAGCCC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCAGAAAGTGGTGTGGTTaGCTGCTGTGCAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFRKWCG*LLCRRG
Trigger: CCCCCTTCTGCACAGCAGCAAACCACACCACTTTCT...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTTGTACTCTACCCAGTaGGTGCCATGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTLYSTQ*VPWLWP
Trigger: GGGCCACAGCCATGGCACCAACTGGGTAGAGTACAA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGTGGTCAGGGTAACCTaGGCGGTACATGCGCATGGC +
Preference number: 5 (lower is better)
Translates to: KKVRVFPMQISSRVGETGVVRVT*AVHAHG
Trigger: GCCATGCGCATGTACCGCCAAGGTTACCCTGACCAC...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGTGGTCAGGGTAACCTaGGCGGTACATGCGCATGGC +
Preference number: 5 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNVVRVT*AVHAHG
Trigger: GCCATGCGCATGTACCGCCAAGGTTACCCTGACCAC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGTGGTCAGGGTAACCTaGGCGGTACATGCGCATGGC +
Preference number: 5 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTVVRVT*AVHAHG
Trigger: GCCATGCGCATGTACCGCCAAGGTTACCCTGACCAC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGTCCAGCCGGTCACTGTaGAGCCGCAGCTCGTTCCTC +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWSSRSL*SRSSFL
Trigger: GAGGAACGAGCTGCGGCTCAACAGTGACCGGCTGGA...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTGCTGGAGCCGTTTCTaGGTGAAGTCCACCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGCWSRF*VKSTSR
Trigger: GCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGTGCAGCTTGGTGTCTaGCAGCTCAGCCGTCAGTCG +
Preference number: 5 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNVQLGV*QLSRQS
Trigger: CGACTGACGGCTGAGCTGCAAGACACCAAGCTGCAC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCGGCCGCCATGCCCTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCACTCATCCTTGGACTCTaGGGAAGAAATGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PAAMPSRHSSALSFGPVPLILGL*GRNVLE
Trigger: CTCCAGGACATTTCTTCCCAAGAGTCCAAGGATGAG...TGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAGGGCATGGCGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGCTGAGGGTGGCGAGCTaGCCCTCCAGCTCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLLRVAS*PSSSRF
Trigger: GAAGCGGGAGCTGGAGGGCAAGCTCGCCACCCTCAG...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCACTGAGGGTGGCGAGCTaGCCCTCCAGCTCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: VETSDTHSLESAPDRRRSLRVAS*PSSSRF
Trigger: GAAGCGGGAGCTGGAGGGCAAGCTCGCCACCCTCAG...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCGATCTCCACCTCCATaGCTTTCCGTGCTTTCACGG +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFRSPPP*LSVLSR
Trigger: CCGTGAAAGCACGGAAAGCAATGGAGGTGGAGATCG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTCCAGCATGAGCTGGGCATCTGCCAGCAGGGCCTTGGTGCGCTTCAGGTCCTTTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: VQHELGICQQGLGALQVLSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...AAGGACCTGAAGCGCACCAAGGCCCTGCTGGCAGATGCCCAGCTCATGCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS TCA 90 bp TTTCCAGGCGCGTCTTGGATTCACGCTTGGAGGAGCGGTTCAGGTTaGAGAAGCCACGTCGCAGGCTCATCTCCTCCAGGCTCCGAAGCT +
Preference number: 5 (lower is better)
Translates to: FPGASWIHAWRSGSG*RSHVAGSSPPGSEA
Trigger: AGCTTCGGAGCCTGGAGGAGATGAGCCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCTCCAAGCGTGAATCCAAGACGCGCCTGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS TCA 90 bp GGTCATCGCTGGAGCTGGCTGTACTTAGGTGGCCCGAGTCCAGGATaGCGCTGCCCCGGTTACTATCGGAGTCAATGTCAGTCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: GHRWSWLYLGGPSPG*RCPGYYRSQCQSGA
Trigger: TGCACCTGACTGACATTGACTCCGATAGTAACCGGGGCAGCGTCATCCTGGACTCGGGCCACCTAAGTACAGCCAGCTCCAGCGATGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS TCA 90 bp CTTCACACTGGAGCAGCTGTGGCTGGAGACGGTCGAGCCGCTGGATaGCGACGAGGAGGACTCAGACTCCGTCTCCGTTCTCTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LHTGAAVAGDGRAAG*RRGGLRLRLRSLSS
Trigger: AGAAGAAAGAGAACGGAGACGGAGTCTGAGTCCTCCTCGTCGTCATCCAGCGGCTCGACCGTCTCCAGCCACAGCTGCTCCAGTGTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS GCA 90 bp AGCTCTGGAATGGGCTGCACCTTGAGCCGCACGCTGTCCCCTGACTaGCGGATCATCTCCACAATCTCATCCCTGGACTTGCTCTCCACA +
Preference number: 5 (lower is better)
Translates to: SSGMGCTLSRTLSPD*RIISTISSLDLLST
Trigger: TGTGGAGAGCAAGTCCAGGGATGAGATTGTGGAGATGATCCGGCAGTCAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTCCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CCA 90 bp ACCAGGGAGATGAGGGAAAGGGCTGTGTGCAGTACAGGCAGACCCTaGGCCTCTGAGCTGAATGACAGCTGCTTCCTGGCAGCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: TREMRERAVCSTGRP*ASELNDSCFLAAPL
Trigger: CAAAGGAGCTGCCAGGAAGCAGCTGTCATTCAGCTCAGAGGCCCAGGGTCTGCCTGTACTGCACACAGCCCTTTCCCTCATCTCCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529578.5
CDS CCA 90 bp AGAGAGGCAAAGACAGATCAGAGGGCCTCAGGCCCAGTGTGCCTGTaGGCTCCAGCTGCCTCCAATGGCAGGGGCATTGTAGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: REAKTDQRASGPVCL*APAASNGRGIVEKM
Trigger: CATCTTCTCTACAATGCCCCTGCCATTGGAGGCAGCTGGAGCCCACAGGCACACTGGGCCTGAGGCCCTCTGATCTGTCTTTGCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529889.1
CDS CCA 90 bp TCCGTCGGGGGTTCCAAGTCGTCAAACGCCAGCTCGATGTTCTCCTaGGAAAGAAGGCCGAGCGGTAGTGAGCATGGGGGTCACATTGTG +
Preference number: 5 (lower is better)
Translates to: SVGGSKSSNASSMFS*ERRPSGSEHGGHIV
Trigger: CACAATGTGACCCCCATGCTCACTACCGCTCGGCCTTCTTTCCCAGGAGAACATCGAGCTGGCGTTTGACGACTTGGAACCCCCGACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533399.1
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCTGCTCACCAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTGGTGAGCAG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGTAGGTACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCACTCCAGCCGTTTCACTaGCGTCCTTTCAAACTCCAG +
Preference number: 5 (lower is better)
Translates to: SRYAAFWAHSWRANCLRPLQPFH*RPFKLQ
Trigger: CTGGAGTTTGAAAGGACGCAAGTGAAACGGCTGGAG...TGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTACCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCCTCCAGCCGTTTCACTaGCGTCCTTTCAAACTCCAG +
Preference number: 5 (lower is better)
Translates to: PRRESPHPTREGRHCFSSLQPFH*RPFKLQ
Trigger: CTGGAGTTTGAAAGGACGCAAGTGAAACGGCTGGAG...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTTCTCCATGTTTTCCTaGAGACGGCTAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPFSMFS*RRLARL
Trigger: GAGCCTGGCTAGCCGTCTCAAGGAAAACATGGAGAA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTGCCTCTGTAGCCGCTaGTTCTGTTCCTTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNCLCSR*FCSFSR
Trigger: CCGGGAGAAGGAACAGAACAAGCGGCTACAGAGGCA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTGCCTCTGTAGCCGCTaGTTCTGTTCCTTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGCLCSR*FCSFSR
Trigger: CCGGGAGAAGGAACAGAACAAGCGGCTACAGAGGCA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTGCCTCTGTAGCCGCTaGTTCTGTTCCTTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: KKVRVFPMQISSRVGETGCLCSR*FCSFSR
Trigger: CCGGGAGAAGGAACAGAACAAGCGGCTACAGAGGCA...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTCCGCGTCCAGCAGCTGGGAGGCGGACTCTCCTGTGTTACGCTCATCTGTCAGAGGTCCCCGATGCGCTaGAATGCCAACTTTAGGTCA +
Preference number: 5 (lower is better)
Translates to: LRVQQLGGGLSCVTLICQRSPMR*NANFRS
Trigger: TGACCTAAAGTTGGCATTCAAGCGCATCGGGGACCT...CTGACAGATGAGCGTAACACAGGAGAGTCCGCCTCCCAGCTGCTGGACGCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCAGGTCCCCGATGCGCTaGAATGCCAACTTTAGGTCA +
Preference number: 5 (lower is better)
Translates to: PRRESPHPTREGRHCFSSRSPMR*NANFRS
Trigger: TGACCTAAAGTTGGCATTCAAGCGCATCGGGGACCT...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTTGACAACCAGGACTaGACCCCGTCAACACGGTCC +
Preference number: 5 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRFDNQD*TPSTRS
Trigger: GGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAAA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTTTTGACAACCAGGACTaGACCCCGTCAACACGGTCC +
Preference number: 5 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTFDNQD*TPSTRS
Trigger: GGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAAA...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCGCCGACAACCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPSRRQP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGTTGTCGGCGGGA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCGTCTTGGATTCACGCTaGGAGGAGCGGTTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPVLDSR*EERFRL
Trigger: CAACCTGAACCGCTCCTCCAAGCGTGAATCCAAGAC...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCATTTCCAGGCGCGTCTaGGATTCACGCTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPISRRV*DSRLEE
Trigger: CTCCTCCAAGCGTGAATCCAAGACGCGCCTGGAAAT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTCCAGTGGGCCGTCGTaGCAGCTCCAGCTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSSGPS*QLQLPE
Trigger: CTCCGGGAGCTGGAGCTGCAACGACGGCCCACTGGA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCATCTCATCCCTGGACTaGCTCTCCACATTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLISSLD*LSTLCP
Trigger: TGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGAT...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATGGCAGCTGGTGGTCTaGCCACTGCCACTACTGCCC +
Preference number: 5 (lower is better)
Translates to: LFHVETSDTHSLESAPDRWQLVV*PLPLLP
Trigger: GGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCCA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AACAGGGTTAGGTTCCTGCTGGTTTGTTCATCCCGCTGCTCCTCCAGCCGTGCCTCCACAGAAAACACCTaGTTCCCGCTGATGCCCGCG +
Preference number: 5 (lower is better)
Translates to: NRVRFLLVCSSRCSSSRASTENT*FPLMPA
Trigger: CGCGGGCATCAGCGGGAACAAGGTGTTTTCTGTGGA...GGCACGGCTGGAGGAGCAGCGGGATGAACAAACCAGCAGGAACCTAACCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLGHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCGCTTCTCCAGAAGCATaGTCTGAATGGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLASPEA*SEWRLR
Trigger: CCTCAGCCTCCATTCAGACAATGCTTCTGGAGAAGC...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTCTGGGCCCACTCATGGCGGGCAAACTGCTTGCGCCCAGCCACTGCAGGTTAGCTTCTCCAGAAGCATaGTCTGAATGGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LLGPLMAGKLLAPSHCRLASPEA*SEWRLR
Trigger: CCTCAGCCTCCATTCAGACAATGCTTCTGGAGAAGC...TAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588791.1
CDS-3UTR CAA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCTTTTCCTCAGGCTaGGCCAGTGGCACAATCCCA +
Preference number: 5 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRCFSSG*ASGTIP
Trigger: TGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGCA...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTGGCGGGCAAACTGCTaGCGCCCAGCTTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVWRANC*RPASAA
Trigger: AGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCTGGCGGGCAAACTGCTaGCGCCCAGCTTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSWRANC*RPASAA
Trigger: AGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCA...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR CAA 90 bp ACGTCATCCTCATCCACATCCAGGATGGCCCCATCGTGGTCCAGCTTCACACGCGAGTGCTGGCTGGACTaGAGAGCCCTATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: TSSSSTSRMAPSWSSFTRECWLD*RALFTR
Trigger: CCTGGTGAATAGGGCTCTCAAGTCCAGCCAGCACTC...GCGTGTGAAGCTGGACCACGATGGGGCCATCCTGGATGTGGATGAGGATGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGAGTGCTGGCTGGACTaGAGAGCCCTATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNECWLD*RALFTR
Trigger: CCTGGTGAATAGGGCTCTCAAGTCCAGCCAGCACTC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTGAGTGCTGGCTGGACTaGAGAGCCCTATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTECWLD*RALFTR
Trigger: CCTGGTGAATAGGGCTCTCAAGTCCAGCCAGCACTC...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGGGCTTTGGCCTTTTTaGTCACCTTCCTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: KKVRVFPMQISSRVGETGGLWPF*SPSWGP
Trigger: TGGCCCCCAGGAAGGTGACAAAAAAGGCCAAAGCCC...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTTTGTACTCTACCCAGTaGGTGCCATGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: KKVRVFPMQISSRVGETGLYSTQ*VPWLWP
Trigger: GGGCCACAGCCATGGCACCAACTGGGTAGAGTACAA...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGGTGGCGAGCTTGCCCTCCAGCTCCCGCTTCTCTCGCAGAACCTTCTGCTTGTGCAGCTTTGACTTCTaGATGGTGTCGATGAGGGCG +
Preference number: 5 (lower is better)
Translates to: RVASLPSSSRFSRRTFCLCSFDF*MVSMRA
Trigger: CGCCCTCATCGACACCATCAAGAAGTCAAAGCTGCA...CAAGCAGAAGGTTCTGCGAGAGAAGCGGGAGCTGGAGGGCAAGCTCGCCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GGGGGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCTGCAGCTTTGACTTCTaGATGGTGTCGATGAGGGCG +
Preference number: 5 (lower is better)
Translates to: GGWRCGWSTHTLVCVGLLCSFDF*MVSMRA
Trigger: CGCCCTCATCGACACCATCAAGAAGTCAAAGCTGCA...GAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTTACGCCCGTGTTTCTaGGTCAGGTGCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPLRPCF*VRCGAR
Trigger: CCTGGCCCCGCACCTGACCAAGAAACACGGGCGTAA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPWIFLF*KCWRAR
Trigger: CCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCCGCCTTCTCGAGCTaGCTCCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSAFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCATCCAGCCGGTCACTGTaGAGCCGCAGCTCGTTCCTC +
Preference number: 5 (lower is better)
Translates to: YRGLEVLSRGSCSSSDRSSSRSL*SRSSFL
Trigger: GAGGAACGAGCTGCGGCTCAACAGTGACCGGCTGGA...TGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCGTTCCAGCTGCCTCTaGTTCTGCTGCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWRSSCL*FCCSTS
Trigger: GGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGAACG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGCGTTCCAGCTGCCTCTaGTTCTGCTGCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGRSSCL*FCCSTS
Trigger: GGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGAACG...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCCCTCCAGGTGCAGCTaGGTGTCTTGCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSPSRCS*VSCSSA
Trigger: GGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GCCAGTCACATTGTACTCTACCCAGTTGGTGCCATGGCTGTGGCCCAGGAGAAATTCTCCAGTTCGTGGTaGCGGACCTGCTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: ASHIVLYPVGAMAVAQEKFSSSW*RTCWPS
Trigger: GGAGGGCCAGCAGGTCCGCAACCACGAACTGGAGAA...TTTCTCCTGGGCCACAGCCATGGCACCAACTGGGTAGAGTACAATGTGACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTCCCGGAGCTGTTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAACAGCTCCGGGA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCTGAGGGTGGCGAGCTaGCCCTCCAGCTCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFLRVAS*PSSSRF
Trigger: GAAGCGGGAGCTGGAGGGCAAGCTCGCCACCCTCAG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCAGGCAGGCAGATCACTaGAGGTCAGAAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: PRRESPHPTREGRHCFSSRQADH*RSEVRD
Trigger: GTCTCGAACTTCTGACCTCAAGTGATCTGCCTGCCT...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTGGCGGGCAAACTGCTaGCGCCCAGCCACTGCAGGT +
Preference number: 5 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWWRANC*RPATAG
Trigger: ACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628822.2
CDS-3UTR CAA 90 bp CTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGGCGCTCCGGGCACTTaGGATGCTCTTCCTGTCATC +
Preference number: 5 (lower is better)
Translates to: LWEYRGLEVLSRGSCSSSGAPGT*DALPVI
Trigger: GATGACAGGAAGAGCATCCAAAGTGCCCGGAGCGCC...AGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CAA 90 bp GAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGACTCGACTTGGACTTCTaGCTCTTCCGAGAGCGCCCC +
Preference number: 5 (lower is better)
Translates to: EYRGLEVLSRGSCSSSDRLDLDF*LFRERP
Trigger: GGGGCGCTCTCGGAAGAGCAAGAAGTCCAAGTCGAG...TCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS GCA 90 bp ATGGACCAGCCACACCTTCTCCGTCTCATTCCAGGCCTCTTCTGCTaGAATCTGTTCTTCTGTTTTCGCCCGCATGGCCTGGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: MDQPHLLRLIPGLFC*NLFFCFRPHGLAWS
Trigger: GCTCCAGGCCAGGCCATGCGGGCGAAAACAGAAGAACAGATTGCAGCAGAAGAGGCCTGGAATGAGACGGAGAAGGTGTGGCTGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528322.6
ENST00000590242.5
CDS GCA 90 bp GATGGCCAGAAGAAGCCTGCTTCAAGTACTTTCCGGTCATGGGGGTaGTACCTGAGGGCTGACACAGGCTGCCAGAGCCTTTTCCGCTCT +
Preference number: 5 (lower is better)
Translates to: DGQKKPASSTFRSWG*YLRADTGCQSLFRS
Trigger: AGAGCGGAAAAGGCTCTGGCAGCCTGTGTCAGCCCTCAGGTAGCACCCCCATGACCGGAAAGTACTTGAAGCAGGCTTCTTCTGGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527312.5
CDS GCA 90 bp CTACGCTGGGAGAAGGAAAAGCGCTTGACAATCATCTGTGAGTTCTaGTTGGCCAGTGAGCCGAACTTGGCTGCCCGCTGCAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: LRWEKEKRLTIICEF*LASEPNLAARCSTE
Trigger: CTCGGTGCTGCAGCGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGATGATTGTCAAGCGCTTTTCCTTCTCCCAGCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CCA 90 bp ACCTTCTCAACGTCATCCTCATCCACATCCAGGATGGCCCCATCGTaGTCCAGCTTCACACGCACCTTCCCCTCAGGCAAGTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: TFSTSSSSTSRMAPS*SSFTRTFPSGKLSS
Trigger: GGAGCTCAACTTGCCTGAGGGGAAGGTGCGTGTGAAGCTGGACCACGATGGGGCCATCCTGGATGTGGATGAGGATGACGTTGAGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528322.6
CDS-3UTR CAA 90 bp GCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGCTGCTCACCAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: AVTQITVGVSRSGGVVERLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTGGTGAGCAG...CCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCTGCTCACCAGGGACTaGTCCACCATGGACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVLLTRD*STMDCS
Trigger: GGAGCAGTCCATGGTGGACAAGTCCCTGGTGAGCAG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCAGGTCCCCGATGCGCTaGAATGCCAACTTTAGGTCA +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPRSPMR*NANFRS
Trigger: TGACCTAAAGTTGGCATTCAAGCGCATCGGGGACCT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCGAGTCTCCCTCACTGTaGATGAGGTCCTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: PRRESPHPTREGRHCFSSESPSL*MRSSFS
Trigger: TGAGAATGAGGACCTCATCAACAGTGAGGGAGACTC...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTTCCCCTCAGGCAAGTaGAGCTCCTCAGATTTGAGT +
Preference number: 5 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPFPSGK*SSSDLS
Trigger: ACTCAAATCTGAGGAGCTCAACTTGCCTGAGGGGAA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACTCCCGCCGACAACCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSRRQP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGTTGTCGGCGGGA...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGAGGAGCGGTTCAGGTaGAAGAAGCCACGTCGCAGG +
Preference number: 5 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLEERFR*KKPRRR
Trigger: CCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCTC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGTCTTGGATTCACGCTaGGAGGAGCGGTTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: KKVRVFPMQISSRVGETGVLDSR*EERFRL
Trigger: CAACCTGAACCGCTCCTCCAAGCGTGAATCCAAGAC...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGAGCCGCTGGCCACCTaGATGGGGATGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFEPLAT*MGMGLE
Trigger: CTCCAACCCCATCCCCATCAAGGTGGCCAGCGGCTC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTCTACCCTCCTCACCCTaGAGGTCATCGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLLPSSP*RSSLEL
Trigger: CAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTAG...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCATCTGTGAGTTCTGCTaGGCCAGTGAGCCGAACTTG +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPICEFC*ASEPNL
Trigger: CAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGAT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGCCACCTGGCCAGCTaGGTCAAAGTCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWGHLAS*VKVQGE
Trigger: CTCTCCCTGGACTTTGACCAAGCTGGCCAGGTGGCC...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGGCTTCTCCAGAAGCATaGTCTGAATGGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRASPEA*SEWRLR
Trigger: CCTCAGCCTCCATTCAGACAATGCTTCTGGAGAAGC...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCATGGCGGGCAAACTGCTaGCGCCCAGCTTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: VETSDTHSLESAPDRRRSWRANC*RPASAA
Trigger: AGCTGCTGAAGCTGGGCGCAAGCAGTTTGCCCGCCA...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGGAGTGCTGGCTGGACTaGAGAGCCCTATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWECWLD*RALFTR
Trigger: CCTGGTGAATAGGGCTCTCAAGTCCAGCCAGCACTC...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGTGGTCAGGGTAACCTaGGCGGTACATGCGCATGGC +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVVVRVT*AVHAHG
Trigger: GCCATGCGCATGTACCGCCAAGGTTACCCTGACCAC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTCCAGCCGGTCACTGTaGAGCCGCAGCTCGTTCCTC +
Preference number: 5 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWSSRSL*SRSSFL
Trigger: GAGGAACGAGCTGCGGCTCAACAGTGACCGGCTGGA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGTCATCCACTTCCCCGTaGATCTCCGCTGCCCGGATG +
Preference number: 5 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLSSTSP*ISAARM
Trigger: CATCCGGGCAGCGGAGATCAACGGGGAAGTGGATGA...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCATCCACTTCCCCGTaGATCTCCGCTGCCCGGATG +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSSTSP*ISAARM
Trigger: CATCCGGGCAGCGGAGATCAACGGGGAAGTGGATGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTGCTGGAGCCGTTTCTaGGTGAAGTCCACCTCCCGC +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVCWSRF*VKSTSR
Trigger: GCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGTGCAGCTTGGTGTCTaGCAGCTCAGCCGTCAGTCG +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPVQLGV*QLSRQS
Trigger: CGACTGACGGCTGAGCTGCAAGACACCAAGCTGCAC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCACCCTCCAGGTGCAGCTaGGTGTCTTGCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VETSDTHSLESAPDRRRSPSRCS*VSCSSA
Trigger: GGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGG...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTTGGGCAATCTCTCGCTaGCTGGGAGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTWAISR*LGALFF
Trigger: GAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCCA...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAGGACTTGACCCCGTCAACACGGTCCTCCAGCTCCGAGTCCACATCAGAGTCAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: PGLDPVNTVLQLRVHIRVSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...GACTCTGATGTGGACTCGGAGCTGGAGGACCGTGTTGACGGGGTCAAGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS TCA 90 bp CTGAGGCGCTCTCATCCCGGCTACGCTGGGAGAAGGAAAAGCGCTTaGCAATCATCTGTGAGTTCTGCTTGGCCAGTGAGCCGAACTTGG +
Preference number: 5 (lower is better)
Translates to: LRRSHPGYAGRRKSA*QSSVSSAWPVSRTW
Trigger: CCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGATGATTGTCAAGCGCTTTTCCTTCTCCCAGCGTAGCCGGGATGAGAGCGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS TCA 90 bp GGGAAGACCCAGGGATGCAGGAGGAAGTCGGGTCTCCCAGGGAACTaGAGAAGCTCTAATGATAGCTTGCTCCTGATTGCCCCTGCACCA +
Preference number: 5 (lower is better)
Translates to: GKTQGCRRKSGLPGN*RSSNDSLLLIAPAP
Trigger: TGGTGCAGGGGCAATCAGGAGCAAGCTATCATTAGAGCTTCTTCAGTTCCCTGGGAGACCCGACTTCCTCCTGCATCCCTGGGTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530557.2
ENST00000533652.1
CDS-3UTR CAA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCTCCAGCCGTTTCACTaGCGTCCTTTCAAACTCCAG +
Preference number: 5 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTLQPFH*RPFKLQ
Trigger: CTGGAGTTTGAAAGGACGCAAGTGAAACGGCTGGAG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGTTCTCCATGTTTTCCTaGAGACGGCTAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGFSMFS*RRLARL
Trigger: GAGCCTGGCTAGCCGTCTCAAGGAAAACATGGAGAA...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATGCCTCTGTAGCCGCTaGTTCTGTTCCTTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: LFHVETSDTHSLESAPDRCLCSR*FCSFSR
Trigger: CCGGGAGAAGGAACAGAACAAGCGGCTACAGAGGCA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCTGCCTCTGTAGCCGCTaGTTCTGTTCCTTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSCLCSR*FCSFSR
Trigger: CCGGGAGAAGGAACAGAACAAGCGGCTACAGAGGCA...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCCCACTGAGTCTCCCTCACTGTaGATGAGGTCCTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: TFPSRSWEPQLPLQPPPTESPSL*MRSSFS
Trigger: TGAGAATGAGGACCTCATCAACAGTGAGGGAGACTC...AGTGGGAGGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCTTCCGCCCGCCATCTTaGTCCTTGTCTTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFFRPPS*SLSFFI
Trigger: AATGAAGAAAGACAAGGACAAAGATGGCGGGCGGAA...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGAAGAGAGAGCCCCCACCCCACACGAGAGGGAAGGCACTGCTTCTCCTCCTTCCGCCCGCCATCTTaGTCCTTGTCTTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: PRRESPHPTREGRHCFSSFRPPS*SLSFFI
Trigger: AATGAAGAAAGACAAGGACAAAGATGGCGGGCGGAA...GGAGGAGAAGCAGTGCCTTCCCTCTCGTGTGGGGTGGGGGCTCTCTCTTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTATCTGTGAGTTCTGCTaGGCCAGTGAGCCGAACTTG +
Preference number: 5 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTICEFC*ASEPNL
Trigger: CAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGAT...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTGGCAGCTGGTGGTCTaGCCACTGCCACTACTGCCC +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFWQLVV*PLPLLP
Trigger: GGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCCA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCCACAGAAAACACCTaGTTCCCGCTGATGCCCGCG +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSTENT*FPLMPA
Trigger: CGCGGGCATCAGCGGGAACAAGGTGTTTTCTGTGGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACGCTTCTCCAGAAGCATaGTCTGAATGGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNASPEA*SEWRLR
Trigger: CCTCAGCCTCCATTCAGACAATGCTTCTGGAGAAGC...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCAGGGGCAAGGGACTTGCTTTTCCTCAGGCTaGGCCAGTGGCACAATCCCA +
Preference number: 5 (lower is better)
Translates to: RCCREGRAHHLTDQGQGTCFSSG*ASGTIP
Trigger: TGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGCA...AGTCCCTTGCCCCTGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGTGCTTTTCCTCAGGCTaGGCCAGTGGCACAATCCCA +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWCFSSG*ASGTIP
Trigger: TGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGCA...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTCCCTTGTGCTGGTGCTaGAAGATGGCTGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLPLCWC*KMAEDS
Trigger: GCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGGG...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGCCCTTGTGCTGGTGCTaGAAGATGGCTGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVPLCWC*KMAEDS
Trigger: GCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGGG...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGGAGTGCTGGCTGGACTaGAGAGCCCTATTCACCAGG +
Preference number: 5 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLECWLD*RALFTR
Trigger: CCTGGTGAATAGGGCTCTCAAGTCCAGCCAGCACTC...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CCCCATGGACCCAGCAACCTAGAGTGTCCCAGTAGGCAACCTGTCCACCGTCCCTCGATGTTCTCCTCCTaGTATCTTTCCAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: PHGPSNLECPSRQPVHRPSMFSS*YLSNSC
Trigger: GCAGGAGTTGGAAAGATACAAGGAGGAGAACATCGA...GGGACGGTGGACAGGTTGCCTACTGGGACACTCTAGGTTGCTGGGTCCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTGGGCTTTGGCCTTTTTaGTCACCTTCCTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPGLWPF*SPSWGP
Trigger: TGGCCCCCAGGAAGGTGACAAAAAAGGCCAAAGCCC...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGGGCTTTGGCCTTTTTaGTCACCTTCCTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLGLWPF*SPSWGP
Trigger: TGGCCCCCAGGAAGGTGACAAAAAAGGCCAAAGCCC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTTGTACTCTACCCAGTaGGTGCCATGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPLYSTQ*VPWLWP
Trigger: GGGCCACAGCCATGGCACCAACTGGGTAGAGTACAA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGTTGTACTCTACCCAGTaGGTGCCATGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: VAVTQITVGVSRSGGVVELYSTQ*VPWLWP
Trigger: GGGCCACAGCCATGGCACCAACTGGGTAGAGTACAA...CTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATCCGCCTTCTCGAGCTaGCTCCGCAGCTGCTGGATC +
Preference number: 5 (lower is better)
Translates to: GTALGLPSLVEFSGITFLSAFSS*LRSCWI
Trigger: GATCCAGCAGCTGCGGAGCAAGCTCGAGAAGGCGGA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTTCATCCACTTCCCCGTaGATCTCCGCTGCCCGGATG +
Preference number: 5 (lower is better)
Translates to: CHSDNCGSIAVWRCCREGSSTSP*ISAARM
Trigger: CATCCGGGCAGCGGAGATCAACGGGGAAGTGGATGA...ACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGCGTTCCAGCTGCCTCTaGTTCTGCTGCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWRSSCL*FCCSTS
Trigger: GGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGAACG...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACGCTGGCACTTCTTCTaGAGCTGCTGCAGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: GTALGLPSLVEFSGITFLRWHFF*SCCRAR
Trigger: GCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGCG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCTCCCGGAGCTGTTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAACAGCTCCGGGA...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAAATCTCCAGACGCAGCTaGGCCTGTTCCAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKISRRS*ACSSIW
Trigger: CCAGATGCTGGAACAGGCCAAGCTGCGTCTGGAGAT...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp AGCCCCCAGGTGGTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCTGGGCAATCTCTCGCTaGCTGGGAGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SPQVVDGSQNEPAGLLFIWAISR*LGALFF
Trigger: GAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCCA...GATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTACCACCTGGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCCTCCAGCTGGTTCTaGAGCTGGGCAATCTCTCGC +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSSSWF*SWAISR
Trigger: GCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCGTCGGGGGTTCCAAGTCGTCAAACGCCAGCTCGATGTTCTCCTCCTTGTATCCGATCTCCACCTCCATaGCTTTCCGTGCTTTCACGG +
Preference number: 5 (lower is better)
Translates to: PSGVPSRQTPARCSPPCIRSPPP*LSVLSR
Trigger: CCGTGAAAGCACGGAAAGCAATGGAGGTGGAGATCG...GATACAAGGAGGAGAACATCGAGCTGGCGTTTGACGACTTGGAACCCCCGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp AAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: KKVRVFPMQISSRVGETGSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...ACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCTGGAGGTGCGGATGGTCCACACACACACTTGTCTGCGTAGGCTTGCTCAACAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: GWRCGWSTHTLVCVGLLNSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...GTTGAGCAAGCCTACGCAGACAAGTGTGTGTGTGGACCATCCGCACCTCCAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCCAGCCACTGCAGGTTaGGTGGCTCCCGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSPATAG*VAPAAP
Trigger: GGGGGCTGCGGGAGCCACCAAACCTGCAGTGGCTGG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628822.2
CDS TCA 90 bp CGGGTCTCCCAGGGAACTGAAGAAGCTCTAATGATAGCTTGCTCCTaGTTGCCCCTGCACCAAGAAGCTAACATGCCAGCCTCCCCGATC +
Preference number: 5 (lower is better)
Translates to: RVSQGTEEALMIACS*LPLHQEANMPASPI
Trigger: GATCGGGGAGGCTGGCATGTTAGCTTCTTGGTGCAGGGGCAATCAGGAGCAAGCTATCATTAGAGCTTCTTCAGTTCCCTGGGAGACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530557.2
ENST00000533652.1
CDS GCA 90 bp GTGTGCAGTACAGGCAGACCCTGGGCCTCTGAGCTGAATGACAGCTaGTTCCTGGCAGCTCCTTTGAGGCTAATGAGAAGGCAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: VCSTGRPWASELNDS*FLAAPLRLMRRQKR
Trigger: CCTTTTCTGCCTTCTCATTAGCCTCAAAGGAGCTGCCAGGAAGCAGCTGTCATTCAGCTCAGAGGCCCAGGGTCTGCCTGTACTGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529578.5
CDS GCA 90 bp ATGGACCAGCCACACCTTCTCCGTCTCATTCCAGGCCTCTTCTGCTaGAATCTGTTCTTCTGTTTTCGCCTGGCTGTGGGCATGAGAGGC +
Preference number: 5 (lower is better)
Translates to: MDQPHLLRLIPGLFC*NLFFCFRLAVGMRG
Trigger: GCCTCTCATGCCCACAGCCAGGCGAAAACAGAAGAACAGATTGCAGCAGAAGAGGCCTGGAATGAGACGGAGAAGGTGTGGCTGGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528564.2
ENST00000533420.3
CDS GCA 90 bp CGGATCATCTCCACAATCTCATCCCTGGACTTGCTCTCCACATTGTaGCCATTAATCTCCACCAGTCGATCTCCTGGCACCAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: RIISTISSLDLLSTL*PLISTSRSPGTSPR
Trigger: CCTGGGGCTGGTGCCAGGAGATCGACTGGTGGAGATTAATGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGATTGTGGAGATGATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 90 bp ATGGACCAGCCACACCTTCTCCGTCTCATTCCAGGCCTCTTCTGCTaGAATCTGTTCTTCTGTTTTCGCATCGGATGGCTCCCTGCGAGG +
Preference number: 5 (lower is better)
Translates to: MDQPHLLRLIPGLFC*NLFFCFRIGWLPAR
Trigger: CCTCGCAGGGAGCCATCCGATGCGAAAACAGAAGAACAGATTGCAGCAGAAGAGGCCTGGAATGAGACGGAGAAGGTGTGGCTGGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 90 bp ACTCAGACTCCGTCTCCGTTCTCTTTCTTCTCGACTTGGACTTCTTaGTCTTCCGAGAGCGCCCCTTCTTCCGCCTCTTGTGCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: TQTPSPFSFFSTWTS*SSESAPSSASCALR
Trigger: CCTCAGAGCACAAGAGGCGGAAGAAGGGGCGCTCTCGGAAGAGCAAGAAGTCCAAGTCGAGAAGAAAGAGAACGGAGACGGAGTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 90 bp TCTGAGGGCGTCGAGGTTTCTGAGGCGCTCTCATCCCGGCTACGCTaGGAGAAGGAAAAGCGCTTGACAATCATCTGTGAGTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SEGVEVSEALSSRLR*EKEKRLTIICEFCL
Trigger: CAAGCAGAACTCACAGATGATTGTCAAGCGCTTTTCCTTCTCCCAGCGTAGCCGGGATGAGAGCGCCTCAGAAACCTCGACGCCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CCA 90 bp ACGAGGAGGACTCAGACTCCGTCTCCGTTCTCTTTCTTCTCGACTTaGACTTCTTGCTCTTCCGAGAGCGCCCCTTCTTCCGCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: TRRTQTPSPFSFFST*TSCSSESAPSSASC
Trigger: ACAAGAGGCGGAAGAAGGGGCGCTCTCGGAAGAGCAAGAAGTCCAAGTCGAGAAGAAAGAGAACGGAGACGGAGTCTGAGTCCTCCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS-3UTR CAA 90 bp GAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATTCTCCATGTTTTCCTaGAGACGGCTAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: EYRGLEVLSRGSCSSSDRFSMFS*RRLARL
Trigger: GAGCCTGGCTAGCCGTCTCAAGGAAAACATGGAGAA...TCGGTCAGATGATGAGCACGACCCTCTCGACAACACCTCCAGACCGCGATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAATTTGACAACCAGGACTaGACCCCGTCAACACGGTCC +
Preference number: 5 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKFDNQD*TPSTRS
Trigger: GGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAAA...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTTTGACAACCAGGACTaGACCCCGTCAACACGGTCC +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPFDNQD*TPSTRS
Trigger: GGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAAA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGTTTGACAACCAGGACTaGACCCCGTCAACACGGTCC +
Preference number: 5 (lower is better)
Translates to: AVTQITVGVSRSGGVVERFDNQD*TPSTRS
Trigger: GGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAAA...CCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000636100.1
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTCCCGCCGACAACCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPSRRQP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGTTGTCGGCGGGA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTCCCGCCGACAACCCTaGAACATGTGCATCACCTTC +
Preference number: 5 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLSRRQP*NMCITF
Trigger: GAAGGTGATGCACATGTTCAAGGGTTGTCGGCGGGA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGAGGAGCGGTTCAGGTaGAAGAAGCCACGTCGCAGG +
Preference number: 5 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKEERFR*KKPRRR
Trigger: CCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCTC...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTATTTCCAGGCGCGTCTaGGATTCACGCTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPISRRV*DSRLEE
Trigger: CTCCTCCAAGCGTGAATCCAAGACGCGCCTGGAAAT...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGATCTCATCCCTGGACTaGCTCTCCACATTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWISSLD*LSTLCP
Trigger: TGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGAT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTCTCTGCCAAGTGGTaGAGGTGGAGCTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLFSAKW*RWSSVL
Trigger: CAGGACAGAGCTCCACCTCAACCACTTGGCAGAGAA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATTCTCTGCCAAGTGGTaGAGGTGGAGCTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LFHVETSDTHSLESAPDRFSAKW*RWSSVL
Trigger: CAGGACAGAGCTCCACCTCAACCACTTGGCAGAGAA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAGGGCTTTGGCCTTTTTaGTCACCTTCCTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: VETSDTHSLESAPDRRRSGLWPF*SPSWGP
Trigger: TGGCCCCCAGGAAGGTGACAAAAAAGGCCAAAGCCC...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGAAAGTGGTGTGGTTaGCTGCTGTGCAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSRKWCG*LLCRRG
Trigger: CCCCCTTCTGCACAGCAGCAAACCACACCACTTTCT...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTTGTACTCTACCCAGTaGGTGCCATGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWLYSTQ*VPWLWP
Trigger: GGGCCACAGCCATGGCACCAACTGGGTAGAGTACAA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGAGCCAGCCAGTCACATaGTACTCTACCCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWSQPVT*YSTQLV
Trigger: CACCAACTGGGTAGAGTACAATGTGACTGGCTGGCT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCGTCGGGGGTTCCAAGTCGTCAAACGCCAGCTCGATGTTCTCCTCCTTGTATCCACAGTGACTTCTTTTaGACAGCCGCCATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: PSGVPSRQTPARCSPPCIHSDFF*TAAMPV
Trigger: CACAGGCATGGCGGCTGTCAAAAAGAAGTCACTGTG...GATACAAGGAGGAGAACATCGAGCTGGCGTTTGACGACTTGGAACCCCCGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLWIFLF*KCWRAR
Trigger: CCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp TTCCGGATCTGCTCCTCTGACAGCTGTACTTCGATGAGGGGCCTCACTGTGGTATGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: FRICSSDSCTSMRGLTVVWIFLF*KCWRAR
Trigger: CCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...TACCACAGTGAGGCCCCTCATCGAAGTACAGCTGTCAGAGGAGCAGATCCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPWIFLF*KCWRAR
Trigger: CCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTCATCCACTTCCCCGTaGATCTCCGCTGCCCGGATG +
Preference number: 5 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSSTSP*ISAARM
Trigger: CATCCGGGCAGCGGAGATCAACGGGGAAGTGGATGA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTGCTGGAGCCGTTTCTaGGTGAAGTCCACCTCCCGC +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFCWSRF*VKSTSR
Trigger: GCGGGAGGTGGACTTCACCAAGAAACGGCTCCAGCA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGTGCAGCTTGGTGTCTaGCAGCTCAGCCGTCAGTCG +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFVQLGV*QLSRQS
Trigger: CGACTGACGGCTGAGCTGCAAGACACCAAGCTGCAC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCTCATCCTTGGACTCTaGGGAAGAAATGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGLILGL*GRNVLE
Trigger: CTCCAGGACATTTCTTCCCAAGAGTCCAAGGATGAG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAGGACTTGACCCCGTCAACACGGTCCTCCAGCTCCGAGTCCACATCAGAGTCAGAGAAGCCTCATCCTaGGACTCTTGGGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: PGLDPVNTVLQLRVHIRVREASS*DSWEEM
Trigger: CATTTCTTCCCAAGAGTCCAAGGATGAGGCTTCTCT...GACTCTGATGTGGACTCGGAGCTGGAGGACCGTGTTGACGGGGTCAAGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp TGGGGGCAGGGAGGTTGGAAGAATGACACGGGCTCAGGACACAGAGTGAGGACTCGCAGAACCTTCTGCTaGTCCTCATACTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: WGQGGWKNDTGSGHRVRTRRTFC*SSYSSS
Trigger: AGAGGAAGAGTATGAGGACAAGCAGAAGGTTCTGCG...AGTCCTCACTCTGTGTCCTGAGCCCGTGTCATTCTTCCAACCTCCCTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATGGGCAATCTCTCGCTaGCTGGGAGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LFHVETSDTHSLESAPDRWAISR*LGALFF
Trigger: GAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCCA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGTCCTCCAGCTGGTTCTaGAGCTGGGCAATCTCTCGC +
Preference number: 5 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWSSSWF*SWAISR
Trigger: GCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGGA...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGCGATCTCCACCTCCATaGCTTTCCGTGCTTTCACGG +
Preference number: 5 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLRSPPP*LSVLSR
Trigger: CCGTGAAAGCACGGAAAGCAATGGAGGTGGAGATCG...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGAGCGCTGTCTTGGCTTaGGCGATGTCATCAATCTGC +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWSAVLA*AMSSIC
Trigger: GCAGATTGATGACATCGCCAAAGCCAAGACAGCGCT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATCCTCCAGCGCTGTCTaGGCTTTGGCGATGTCATCA +
Preference number: 5 (lower is better)
Translates to: LFHVETSDTHSLESAPDRSSSAV*ALAMSS
Trigger: TGATGACATCGCCAAAGCCAAGACAGCGCTGGAGGA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGCACTGGTCTGACACTTaGGGGAGCAGGCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKHWSDT*GSRPET
Trigger: GGTCTCTGGCCTGCTCCCCAAAGTGTCAGACCAGTG...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGCATAAAAGGTGGGGCTaGTGTCTTCCTTGGCCAATC +
Preference number: 5 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGHKRWG*CLPWPI
Trigger: GATTGGCCAAGGAAGACACAAGCCCCACCTTTTATG...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAAGACCTCAACATTCCCTaGTGGAGGCTAGGGAGGATG +
Preference number: 5 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKDLNIP*WRLGRM
Trigger: CATCCTCCCTAGCCTCCACAAGGGAATGTTGAGGTC...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp GAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGAGAGGTTGCAGTGAGTaGAGATCATGCCACTGCATT +
Preference number: 5 (lower is better)
Translates to: EEGQGVSHADQQSGGGDRRGCSE*RSCHCI
Trigger: AATGCAGTGGCATGATCTCAACTCACTGCAACCTCT...CCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS TCA 90 bp CCTTTGAGGCTAATGAGAAGGCAGAAAAGGTCTGCCCAGAACAAATaGCCCATCATCCTGGCACTATCAGTCCAGGCCCTGGCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: PLRLMRRQKRSAQNK*PIILALSVQALACV
Trigger: CACGCAGGCCAGGGCCTGGACTGATAGTGCCAGGATGATGGGTCATTTGTTCTGGGCAGACCTTTTCTGCCTTCTCATTAGCCTCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529578.5
CDS GCA 90 bp ATGGACCAGCCACACCTTCTCCGTCTCATTCCAGGCCTCTTCTGCTaGAATCTGTTCTTCTGTTTTCGCCTCCTGCTTCACACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: MDQPHLLRLIPGLFC*NLFFCFRLLLHTRD
Trigger: GTCCCTGGTGTGAAGCAGGAGGCGAAAACAGAAGAACAGATTGCAGCAGAAGAGGCCTGGAATGAGACGGAGAAGGTGTGGCTGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531267.5
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCTCCAGCCGTTTCACTaGCGTCCTTTCAAACTCCAG +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPLQPFH*RPFKLQ
Trigger: CTGGAGTTTGAAAGGACGCAAGTGAAACGGCTGGAG...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCCAGTTCGTGCTTCTaGCGGCTCGCCTCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSSSCF*RLASAS
Trigger: GGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATCCAGTTCGTGCTTCTaGCGGCTCGCCTCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSSSCF*RLASAS
Trigger: GGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGGA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGGGTTTTGACAACCAGGACTaGACCCCGTCAACACGGTCC +
Preference number: 5 (lower is better)
Translates to: CHSDNCGSIAVWRCCREGFDNQD*TPSTRS
Trigger: GGACCGTGTTGACGGGGTCAAGTCCTGGTTGTCAAA...ACCCTCTCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000636100.1
CDS-3UTR CAA 90 bp AGGTGTTGTCGAGAGGGTCGTGCTCATCATCTGACCGATCAGGGGCAAGGGACTTTCCCCTCAGGCAAGTaGAGCTCCTCAGATTTGAGT +
Preference number: 5 (lower is better)
Translates to: RCCREGRAHHLTDQGQGTFPSGK*SSSDLS
Trigger: ACTCAAATCTGAGGAGCTCAACTTGCCTGAGGGGAA...AGTCCCTTGCCCCTGATCGGTCAGATGATGAGCACGACCCTCTCGACAACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAAGGACGCTGGACTCATaGAGGTACACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GTALGLPSLVEFSGITFLRTLDS*RYTSEA
Trigger: GGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCCT...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCCCGCCATCTTTGTCCTaGTCTTTCTTCATTAGGTTA +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFPPSLS*SFFIRL
Trigger: TAACCTAATGAAGAAAGACAAGGACAAAGATGGCGG...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGATTTCCAGGCGCGTCTaGGATTCACGCTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWISRRV*DSRLEE
Trigger: CTCCTCCAAGCGTGAATCCAAGACGCGCCTGGAAAT...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAGAGCCGCTGGCCACCTaGATGGGGATGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKEPLAT*MGMGLE
Trigger: CTCCAACCCCATCCCCATCAAGGTGGCCAGCGGCTC...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGTGCCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGGACTTGCTCTCCACATaGTGCCCATTAATCTCCACC +
Preference number: 5 (lower is better)
Translates to: SAPDRRRSGCFPCRSAVGDLLST*CPLIST
Trigger: GGTGGAGATTAATGGGCACAATGTGGAGAGCAAGTC...CCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCAGAGAAGCGGGTGGCATaGCCATTAATGATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: VETSDTHSLESAPDRRRSEKRVA*PLMMVG
Trigger: CCCCACCATCATTAATGGCAATGCCACCCGCTTCTC...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TTCTATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCATGCTTTTCCTCAGGCTaGGCCAGTGGCACAATCCCA +
Preference number: 5 (lower is better)
Translates to: FYRGAMEGAVSVRDRSTSCFSSG*ASGTIP
Trigger: TGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGCA...TGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGATAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCCCTTGTGCTGGTGCTaGAAGATGGCTGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFPLCWC*KMAEDS
Trigger: GCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGGG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGAGCCAGCCAGTCACATaGTACTCTACCCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVSQPVT*YSTQLV
Trigger: CACCAACTGGGTAGAGTACAATGTGACTGGCTGGCT...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCACAGTGACTTCTTTTaGACAGCCGCCATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSHSDFF*TAAMPV
Trigger: CACAGGCATGGCGGCTGTCAAAAAGAAGTCACTGTG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTTGCAGCTTTGACTTCTaGATGGTGTCGATGAGGGCG +
Preference number: 5 (lower is better)
Translates to: PSLVEFSGITFLGWGLGPCSFDF*MVSMRA
Trigger: CGCCCTCATCGACACCATCAAGAAGTCAAAGCTGCA...AGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTATTACGCCCGTGTTTCTaGGTCAGGTGCGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLLRPCF*VRCGAR
Trigger: CCTGGCCCCGCACCTGACCAAGAAACACGGGCGTAA...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp TGTTTCCCATGCAGATCAGCAGTCGGGTGGGGGAGACCGGTGCCCCACCACTTCACCCCTTTGTTCTTCTaGATGTTCTTCTGTACACAG +
Preference number: 5 (lower is better)
Translates to: CFPCRSAVGWGRPVPHHFTPLFF*MFFCTQ
Trigger: CTGTGTACAGAAGAACATCAAGAAGAACAAAGGGGT...GAAGTGGTGGGGCACCGGTCTCCCCCACCCGACTGCTGATCTGCATGGGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCCCCTCCAGGTGCAGCTaGGTGTCTTGCAGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCPSRCS*VSCSSA
Trigger: GGCTGAGCTGCAAGACACCAAGCTGCACCTGGAGGG...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGCTCATCCTTGGACTCTaGGGAAGAAATGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWLILGL*GRNVLE
Trigger: CTCCAGGACATTTCTTCCCAAGAGTCCAAGGATGAG...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGTCCCGGAGCTGTTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAACAGCTCCGGGA...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATCTCCAGACGCAGCTaGGCCTGTTCCAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFISRRS*ACSSIW
Trigger: CCAGATGCTGGAACAGGCCAAGCTGCGTCTGGAGAT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGATCTCCAGACGCAGCTaGGCCTGTTCCAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKISRRS*ACSSIW
Trigger: CCAGATGCTGGAACAGGCCAAGCTGCGTCTGGAGAT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTCCTCCAGCTGGTTCTaGAGCTGGGCAATCTCTCGC +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSSSWF*SWAISR
Trigger: GCGAGAGATTGCCCAGCTCAAGAACCAGCTGGAGGA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCATGTCCTGCAAACTGTaGATGAGGTCCTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPMSCKL*MRSSFS
Trigger: TGAGAATGAGGACCTCATCAACAGTTTGCAGGACAT...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGGAGGAGGGGTGTCATTaGTTTCTTGCCTTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGEEGCH*FLAFLH
Trigger: ATGCAGAAAGGCAAGAAACAAATGACACCCCTCCTC...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS TCA 90 bp TATGAGCCAGGCACAGGGGAAGGCACTTCATACAGGTCTCCTCATTaGATCCTCATAACAACACACTTTCCGCATGGCCTGGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: YEPGTGEGTSYRSPH*ILITTHFPHGLAWS
Trigger: GCTCCAGGCCAGGCCATGCGGAAAGTGTGTTGTTATGAGGATTCAATGAGGAGACCTGTATGAAGTGCCTTCCCCTGTGCCTGGCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCGAGTCTCCCTCACTGTaGATGAGGTCCTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSESPSL*MRSSFS
Trigger: TGAGAATGAGGACCTCATCAACAGTGAGGGAGACTC...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGATTCCCCTCAGGCAAGTaGAGCTCCTCAGATTTGAGT +
Preference number: 5 (lower is better)
Translates to: LFHVETSDTHSLESAPDRFPSGK*SSSDLS
Trigger: ACTCAAATCTGAGGAGCTCAACTTGCCTGAGGGGAA...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCGACTTGCTCTCCACATaGTGCCCATTAATCTCCACC +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSDLLST*CPLIST
Trigger: GGTGGAGATTAATGGGCACAATGTGGAGAGCAAGTC...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGGACTTGCTCTCCACATaGTGCCCATTAATCTCCACC +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVDLLST*CPLIST
Trigger: GGTGGAGATTAATGGGCACAATGTGGAGAGCAAGTC...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATGGCAGCTGGTGGTCTaGCCACTGCCACTACTGCCC +
Preference number: 5 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKWQLVV*PLPLLP
Trigger: GGGCAGTAGTGGCAGTGGCAAGACCACCAGCTGCCA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTGAGAAGCGGGTGGCATaGCCATTAATGATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFEKRVA*PLMMVG
Trigger: CCCCACCATCATTAATGGCAATGCCACCCGCTTCTC...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGGAGAAGCGGGTGGCATaGCCATTAATGATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKEKRVA*PLMMVG
Trigger: CCCCACCATCATTAATGGCAATGCCACCCGCTTCTC...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTTCTCTGCCAAGTGGTaGAGGTGGAGCTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFFSAKW*RWSSVL
Trigger: CAGGACAGAGCTCCACCTCAACCACTTGGCAGAGAA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATGCTTTTCCTCAGGCTaGGCCAGTGGCACAATCCCA +
Preference number: 5 (lower is better)
Translates to: GTALGLPSLVEFSGITFLCFSSG*ASGTIP
Trigger: TGGGATTGTGCCACTGGCCAAGCCTGAGGAAAAGCA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGAAAGTGGTGTGGTTaGCTGCTGTGCAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFRKWCG*LLCRRG
Trigger: CCCCCTTCTGCACAGCAGCAAACCACACCACTTTCT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGAGAAAGTGGTGTGGTTaGCTGCTGTGCAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKRKWCG*LLCRRG
Trigger: CCCCCTTCTGCACAGCAGCAAACCACACCACTTTCT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TTCTATCGTGGGGCAATGGAGGGGGCAGTCTCTGTTCGAGACAGATCCACTTCACACAGTGACTTCTTTTaGACAGCCGCCATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: FYRGAMEGAVSVRDRSTSHSDFF*TAAMPV
Trigger: CACAGGCATGGCGGCTGTCAAAAAGAAGTCACTGTG...TGAAGTGGATCTGTCTCGAACAGAGACTGCCCCCTCCATTGCCCCACGATAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGTGCAGCTTTGACTTCTaGATGGTGTCGATGAGGGCG +
Preference number: 5 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLCSFDF*MVSMRA
Trigger: CGCCCTCATCGACACCATCAAGAAGTCAAAGCTGCA...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATGGATCTTTCTCTTCTaGAAGTGCTGGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GTALGLPSLVEFSGITFLWIFLF*KCWRAR
Trigger: CCTGGCCCGCCAGCACTTCAAGAAGAGAAAGATCCA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTCAAGGCACTCCAGTGCACTCAGTTTCGGGCCTGTCCCATCTCCCAGGCCACTACCCCTTTGTTCTTCTaGATGTTCTTCTGTACACAG +
Preference number: 5 (lower is better)
Translates to: LKALQCTQFRACPISQATTPLFF*MFFCTQ
Trigger: CTGTGTACAGAAGAACATCAAGAAGAACAAAGGGGT...AGTGGCCTGGGAGATGGGACAGGCCCGAAACTGAGTGCACTGGAGTGCCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCCAGCCGGTCACTGTaGAGCCGCAGCTCGTTCCTC +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSSRSL*SRSSFL
Trigger: GAGGAACGAGCTGCGGCTCAACAGTGACCGGCTGGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCGCTGGCACTTCTTCTaGAGCTGCTGCAGAGCCCGC +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSRWHFF*SCCRAR
Trigger: GCGGGCTCTGCAGCAGCTCAAGAAGAAGTGCCAGCG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTATTCAGGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGTGCAGCTTGGTGTCTaGCAGCTCAGCCGTCAGTCG +
Preference number: 5 (lower is better)
Translates to: LIQESEQSRGSAVIEEDLVQLGV*QLSRQS
Trigger: CGACTGACGGCTGAGCTGCAAGACACCAAGCTGCAC...TAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCCTGAATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCCTCATCCTTGGACTCTaGGGAAGAAATGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSLILGL*GRNVLE
Trigger: CTCCAGGACATTTCTTCCCAAGAGTCCAAGGATGAG...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTCGCAGAACCTTCTGCTaGTCCTCATACTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLRRTFC*SSYSSS
Trigger: AGAGGAAGAGTATGAGGACAAGCAGAAGGTTCTGCG...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCGATCTCCACCTCCATaGCTTTCCGTGCTTTCACGG +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFRSPPP*LSVLSR
Trigger: CCGTGAAAGCACGGAAAGCAATGGAGGTGGAGATCG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTACGATCTCCACCTCCATaGCTTTCCGTGCTTTCACGG +
Preference number: 5 (lower is better)
Translates to: GTALGLPSLVEFSGITFLRSPPP*LSVLSR
Trigger: CCGTGAAAGCACGGAAAGCAATGGAGGTGGAGATCG...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGTCAGAGCAATCCCGGGGATCTGCAGTTATAGAGGAGGATCTAGCAGGCTGCTGGGGCCAAGGGAATaGTCTCCTTCTCAACTGAAA +
Preference number: 5 (lower is better)
Translates to: GVRAIPGICSYRGGSSRLLGPRE*SPSQLK
Trigger: TTTCAGTTGAGAAGGAGACAATTCCCTTGGCCCCAG...CAGCCTGCTAGATCCTCCTCTATAACTGCAGATCCCCGGGATTGCTCTGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CCCTGGAGGATGGATACTATGATGTGTTCCTCTCTACCCACTCTAAGCTTATGCTCTAGCAGGCTGGCTTaGAGCCTGGCAAAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: PWRMDTMMCSSLPTLSLCSSRLA*SLAKGQ
Trigger: CTGGCCCTTTGCCAGGCTCAAAGCCAGCCTGCTAGA...GCATAAGCTTAGAGTGGGTAGAGAGGAACACATCATAGTATCCATCCTCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS GCA 90 bp CTTCCTGGCAGCTCCTTTGAGGCTAATGAGAAGGCAGAAAAGGTCTaGCCAGAACAAATGACCCATCATCCTGGCACTATCAGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: LPGSSFEANEKAEKV*PEQMTHHPGTISPG
Trigger: GCCTGGACTGATAGTGCCAGGATGATGGGTCATTTGTTCTGGGCAGACCTTTTCTGCCTTCTCATTAGCCTCAAAGGAGCTGCCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529578.5
CDS-3UTR CAA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTATTCTCCATGTTTTCCTaGAGACGGCTAGCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: GTALGLPSLVEFSGITFLFSMFS*RRLARL
Trigger: GAGCCTGGCTAGCCGTCTCAAGGAAAACATGGAGAA...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGAGGTCCCCGATGCGCTaGAATGCCAACTTTAGGTCA +
Preference number: 5 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKRSPMR*NANFRS
Trigger: TGACCTAAAGTTGGCATTCAAGCGCATCGGGGACCT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TGTCGCTGTCACTCAGATAACTGTGGGAGTATCGCGGTCTGGAGGTGTTGTCGAGAGTCTCCCTCACTGTaGATGAGGTCCTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: CRCHSDNCGSIAVWRCCRESPSL*MRSSFS
Trigger: TGAGAATGAGGACCTCATCAACAGTGAGGGAGACTC...TCGACAACACCTCCAGACCGCGATACTCCCACAGTTATCTGAGTGACAGCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGTTCCGCCCGCCATCTTaGTCCTTGTCTTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVFRPPS*SLSFFI
Trigger: AATGAAGAAAGACAAGGACAAAGATGGCGGGCGGAA...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTGAGCCGCTGGCCACCTaGATGGGGATGGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFEPLAT*MGMGLE
Trigger: CTCCAACCCCATCCCCATCAAGGTGGCCAGCGGCTC...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCAGAGAAGCGGGTGGCATaGCCATTAATGATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSEKRVA*PLMMVG
Trigger: CCCCACCATCATTAATGGCAATGCCACCCGCTTCTC...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp AGTGGCACAATCCCAAACACATTGTTCTCTGCCAAGTGGTTGAGGTGGAGCTCTGAGAAGCGGGTGGCATaGCCATTAATGATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SGTIPNTLFSAKWLRWSSEKRVA*PLMMVG
Trigger: CCCCACCATCATTAATGGCAATGCCACCCGCTTCTC...AGAGCTCCACCTCAACCACTTGGCAGAGAACAATGTGTTTGGGATTGTGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS-3UTR CAA 90 bp GTAGATGGCAGCCAGAATGAACCAGCAGGCCTTCTGTTCATCGGGGGAGATGCCACAATCCCAAACACATaGTTCTCTGCCAAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: VDGSQNEPAGLLFIGGDATIPNT*FSAKWL
Trigger: CAACCACTTGGCAGAGAACAATGTGTTTGGGATTGT...GGCATCTCCCCCGATGAACAGAAGGCCTGCTGGTTCATTCTGGCTGCCATCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530254.6
ENST00000588791.1
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGCCAGCCAGTCACATaGTACTCTACCCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSQPVT*YSTQLV
Trigger: CACCAACTGGGTAGAGTACAATGTGACTGGCTGGCT...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCAATTGCAGGAGAGAAGAGCCAGCCAGTCACATaGTACTCTACCCAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GKQGRAQPSEYKPIAGEKSQPVT*YSTQLV
Trigger: CACCAACTGGGTAGAGTACAATGTGACTGGCTGGCT...CTTCTCTCCTGCAATTGGTTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCTGACAGAAGAAGGTCAGGGTGTTTCCCATGCAGATCAGCAGTCGGGTGGGACCCCTTTGTTCTTCTaGATGTTCTTCTGTACACAG +
Preference number: 5 (lower is better)
Translates to: PLTEEGQGVSHADQQSGGTPLFF*MFFCTQ
Trigger: CTGTGTACAGAAGAACATCAAGAAGAACAAAGGGGT...CCCACCCGACTGCTGATCTGCATGGGAAACACCCTGACCTTCTTCTGTCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCGTTCCAGCTGCCTCTaGTTCTGCTGCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSRSSCL*FCCSTS
Trigger: GGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGAACG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAGAAGCCTCATCCTaGGACTCTTGGGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: LFHVETSDTHSLESAPDRREASS*DSWEEM
Trigger: CATTTCTTCCCAAGAGTCCAAGGATGAGGCTTCTCT...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGGATAACCTTTTTAGGGTGGGGGCTGGGACCTCCAGACCACATGGTGTTGTGAGAGAAGCCTCATCCTaGGACTCTTGGGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: RDNLFRVGAGTSRPHGVVREASS*DSWEEM
Trigger: CATTTCTTCCCAAGAGTCCAAGGATGAGGCTTCTCT...CACAACACCATGTGGTCTGGAGGTCCCAGCCCCCACCCTAAAAAGGTTATCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAAGAAGGTCACGCAGAACCTTCTGCTaGTCCTCATACTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VETSDTHSLESAPDRRRSRRTFC*SSYSSS
Trigger: AGAGGAAGAGTATGAGGACAAGCAGAAGGTTCTGCG...TGACCTTCTTCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTGGTGTCATTTGTTTCTaGCCTTTCTGCATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLGVICF*PFCMSC
Trigger: GCAGCTCATGCAGAAAGGCAAGAAACAAATGACACC...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp ACCAGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTCTGTCCCATTCATTTaGGGGGAGACTTTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: TRHCTWAPKSGGVLRDNLSVPFI*GETFLP
Trigger: AGGGAGAAAAGTCTCCCCCAAAATGAATGGGACAGA...AAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CTCTTCCACGTGGAGACATCAGACACCCATAGCCTGGAAAGTGCCCCTGACAGAGGTGCAGCATGTATTTaGTGTCTACCTTCCTCCACT +
Preference number: 5 (lower is better)
Translates to: LFHVETSDTHSLESAPDRGAACI*CLPSST
Trigger: AGTGGAGGAAGGTAGACACAAAATACATGCTGCACC...TCTGTCAGGGGCACTTTCCAGGCTATGGGTGTCTGATGTCTCCACGTGGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp GCCTTCTGCAACATCTTAGGGACCAGAGGTACCATGAGTGTACAGGTAAGGTCAAGGTCCCCGATGCGCTaGAATGCCAACTTTAGGTCA +
Preference number: 5 (lower is better)
Translates to: AFCNILGTRGTMSVQVRSRSPMR*NANFRS
Trigger: TGACCTAAAGTTGGCATTCAAGCGCATCGGGGACCT...TGACCTTACCTGTACACTCATGGTACCTCTGGTCCCTAAGATGTTGCAGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTTCCCCTCAGGCAAGTaGAGCTCCTCAGATTTGAGT +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFFPSGK*SSSDLS
Trigger: ACTCAAATCTGAGGAGCTCAACTTGCCTGAGGGGAA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTAGGACGCTGGACTCATaGAGGTACACCAGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSRTLDS*RYTSEA
Trigger: GGCCTCACTGGTGTACCTCAATGAGTCCAGCGTCCT...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGACTTGCTCTCCACATaGTGCCCATTAATCTCCACC +
Preference number: 5 (lower is better)
Translates to: GTALGLPSLVEFSGITFLDLLST*CPLIST
Trigger: GGTGGAGATTAATGGGCACAATGTGGAGAGCAAGTC...TAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCCACAGAAAACACCTaGTTCCCGCTGATGCCCGCG +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSTENT*FPLMPA
Trigger: CGCGGGCATCAGCGGGAACAAGGTGTTTTCTGTGGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CCCCAAGCCTTCCCTCTCAAGTTGAGTTTATGGTCCAGACCACCTGGACAGAGCACAATCCCAAACACATaGTTCTCTGCCAAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: PQAFPLKLSLWSRPPGQSTIPNT*FSAKWL
Trigger: CAACCACTTGGCAGAGAACAATGTGTTTGGGATTGT...GCTCTGTCCAGGTGGTCTGGACCATAAACTCAACTTGAGAGGGAAGGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ATGAAGACAGGGACCGAGCAGGGCAGAGACAGCACTCCCAACCTATTCACATTGTCGATGTTCTCCTCCTaGTATCTTTCCAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: MKTGTEQGRDSTPNLFTLSMFSS*YLSNSC
Trigger: GCAGGAGTTGGAAAGATACAAGGAGGAGAACATCGA...CAATGTGAATAGGTTGGGAGTGCTGTCTCTGCCCTGCTCGGTCCCTGTCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp GTTGAGTTTATGGTCCAGACCACCTGGACAGAGCAGGAGGGAGGCAGTGCTTGGACCCCTTTGTTCTTCTaGATGTTCTTCTGTACACAG +
Preference number: 5 (lower is better)
Translates to: VEFMVQTTWTEQEGGSAWTPLFF*MFFCTQ
Trigger: CTGTGTACAGAAGAACATCAAGAAGAACAAAGGGGT...CCAAGCACTGCCTCCCTCCTGCTCTGTCCAGGTGGTCTGGACCATAAACTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCTCATCCTTGGACTCTaGGGAAGAAATGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFLILGL*GRNVLE
Trigger: CTCCAGGACATTTCTTCCCAAGAGTCCAAGGATGAG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTCCCGGAGCTGTTTCTaGACCTTGGCCAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSSRSCF*TLAREA
Trigger: GGCTTCTCTGGCCAAGGTCAAGAAACAGCTCCGGGA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GGAGATGACATTCCCGAGTCGTTCTTGGGAGCCCCAGCTACCACTACAGCCCCCTCTAATGAGAAGGGCTaGAATCCAAAAAGAAAGAGA +
Preference number: 5 (lower is better)
Translates to: GDDIPESFLGAPATTTAPSNEKG*NPKRKR
Trigger: TCTCTTTCTTTTTGGATTCAAGCCCTTCTCATTAGA...GGGGGCTGTAGTGGTAGCTGGGGCTCCCAAGAACGACTCGGGAATGTCATCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CTTTGCCTGAGCCTGAAGGAACAGGCAGGAAAACTGGCGCAGCCAGGAGGAAAACCGCCATCTTTGTCCTaGTCTTTCTTCATTAGGTTA +
Preference number: 5 (lower is better)
Translates to: LCLSLKEQAGKLAQPGGKPPSLS*SFFIRL
Trigger: TAACCTAATGAAGAAAGACAAGGACAAAGATGGCGG...TTTTCCTCCTGGCTGCGCCAGTTTTCCTGCCTGTTCCTTCAGGCTCAGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTATTTCCAGGCGCGTCTaGGATTCACGCTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSISRRV*DSRLEE
Trigger: CTCCTCCAAGCGTGAATCCAAGACGCGCCTGGAAAT...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGACAATCCCAAACACATaGTTCTCTGCCAAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWTIPNT*FSAKWL
Trigger: CAACCACTTGGCAGAGAACAATGTGTTTGGGATTGT...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTTCGATGTTCTCCTCCTaGTATCTTTCCAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFSMFSS*YLSNSC
Trigger: GCAGGAGTTGGAAAGATACAAGGAGGAGAACATCGA...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTGGGCAATCTCTCGCTaGCTGGGAGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSWAISR*LGALFF
Trigger: GAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCCA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATGGGCAATCTCTCGCTaGCTGGGAGCACTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKWAISR*LGALFF
Trigger: GAAGAACAGTGCTCCCAGCAAGCGAGAGATTGCCCA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACCCCAGGCCGGGTTATaGGAGGTTGATGTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKPQAGL*EVDVGV
Trigger: AACTCCAACATCAACCTCCAATAACCCGGCCTGGGG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAATCTGTGAGTTCTGCTaGGCCAGTGAGCCGAACTTG +
Preference number: 5 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKICEFC*ASEPNL
Trigger: CAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGAT...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAAATCTCATCCCTGGACTaGCTCTCCACATTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKISSLD*LSTLCP
Trigger: TGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGAT...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTATCTCATCCCTGGACTaGCTCTCCACATTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSISSLD*LSTLCP
Trigger: TGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGAT...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTGCTTCTCCAGAAGCATaGTCTGAATGGAGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSASPEA*SEWRLR
Trigger: CCTCAGCCTCCATTCAGACAATGCTTCTGGAGAAGC...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TTCCTCTCTACCCACTCTAAGCTTATGCATACTAGCAGGTGCAGCATGTATTTTCCCTTGTGCTGGTGCTaGAAGATGGCTGAGGACAGC +
Preference number: 5 (lower is better)
Translates to: FLSTHSKLMHTSRCSMYFPLCWC*KMAEDS
Trigger: GCTGTCCTCAGCCATCTTCAAGCACCAGCACAAGGG...AAAATACATGCTGCACCTGCTAGTATGCATAAGCTTAGAGTGGGTAGAGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCACAGTGACTTCTTTTaGACAGCCGCCATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSHSDFF*TAAMPV
Trigger: CACAGGCATGGCGGCTGTCAAAAAGAAGTCACTGTG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAACACAGTGACTTCTTTTaGACAGCCGCCATGCCTGTG +
Preference number: 5 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKHSDFF*TAAMPV
Trigger: CACAGGCATGGCGGCTGTCAAAAAGAAGTCACTGTG...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTTGCAGCTTTGACTTCTaGATGGTGTCGATGAGGGCG +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSCSFDF*MVSMRA
Trigger: CGCCCTCATCGACACCATCAAGAAGTCAAAGCTGCA...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp GCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTAGGGTGGACCCCTTTGTTCTTCTaGATGTTCTTCTGTACACAG +
Preference number: 5 (lower is better)
Translates to: ALGLPSLVEFSGITFLGWTPLFF*MFFCTQ
Trigger: CTGTGTACAGAAGAACATCAAGAAGAACAAAGGGGT...CCACCCTAAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp AGGCACTGCACTTGGGCTCCCAAGTCTGGTGGAGTTCTCAGGGATAACCTTTTTCCGCCATCTTTGTCCTaGTCTTTCTTCATTAGGTTA +
Preference number: 5 (lower is better)
Translates to: RHCTWAPKSGGVLRDNLFPPSLS*SFFIRL
Trigger: TAACCTAATGAAGAAAGACAAGGACAAAGATGGCGG...AAAAAGGTTATCCCTGAGAACTCCACCAGACTTGGGAGCCCAAGTGCAGTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTCGCAGAACCTTCTGCTaGTCCTCATACTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSRRTFC*SSYSSS
Trigger: AGAGGAAGAGTATGAGGACAAGCAGAAGGTTCTGCG...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATTCCGCCCGCCATCTTaGTCCTTGTCTTTCTTCATT +
Preference number: 5 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKFRPPS*SLSFFI
Trigger: AATGAAGAAAGACAAGGACAAAGATGGCGGGCGGAA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TTTGTCACACTAGTCCCTAGTAGAAACAGAAAATGTACCACGCTATGTGAAAACTGCAGGGTGCCACCCTaGTGCTGGTGCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: FVTLVPSRNRKCTTLCENCRVPP*CWCLKM
Trigger: CATCTTCAAGCACCAGCACAAGGGTGGCACCCTGCA...GTTTTCACATAGCGTGGTACATTTTCTGTTTCTACTAGGGACTAGTGTGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS-3UTR CAA 90 bp CTTTATTTCCATACATCGGGTAAACAGGGGAGAGCACAGCCCAGTGAGTACAAATCGATGTTCTCCTCCTaGTATCTTTCCAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: LYFHTSGKQGRAQPSEYKSMFSS*YLSNSC
Trigger: GCAGGAGTTGGAAAGATACAAGGAGGAGAACATCGA...TTTGTACTCACTGGGCTGTGCTCTCCCCTGTTTACCCGATGTATGGAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp ACTTCCATCTTCAGTTTTTCTGATCACAAGTCCTCAACCCCAAGCCTTCCCTCTACAATCCCAAACACATaGTTCTCTGCCAAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: TSIFSFSDHKSSTPSLPSTIPNT*FSAKWL
Trigger: CAACCACTTGGCAGAGAACAATGTGTTTGGGATTGT...AGAGGGAAGGCTTGGGGTTGAGGACTTGTGATCAGAAAAACTGAAGATGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000527372.7
ENST00000530254.6
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS-3UTR CAA 90 bp TTTGTCACACTAGTCCCTAGTAGAAACAGAAAATGTACCACGCTATGTGAAAACCCGGGTTATTGGAGGTaGATGTTGGAGTTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: FVTLVPSRNRKCTTLCENPGYWR*MLEFPV
Trigger: AACTGGAAACTCCAACATCAACCTCCAATAACCCGG...GTTTTCACATAGCGTGGTACATTTTCTGTTTCTACTAGGGACTAGTGTGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527372.7
CDS GCA 72 bp GCCCCGCCGCGTGGCCGAGGAGGCCCGGCTGACCGGTaGAGAGACGGTGGAGGCCGGGCTGAAGTCGGAGCC +
Preference number: 6 (lower is better)
Translates to: APPRGRGGPADR*RDGGGRAEVGA
Trigger: GGCTCCGACTTCAGCCCGGCCTCCACCGTCTCTGCACCGGTCAGCCGGGCCTCCTCGGCCACGCGGCGGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS GCA 72 bp AGGCAGAGCTGCGTGGCCGGGGTGGCACCGACAGACTaGGGGCCAGCGACGGGTGGCTGTACTGCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: RQSCVAGVAPTD*GPATGGCTASR
Trigger: CCTGCTCGCAGTACAGCCACCCGTCGCTGGCCCGCAGTCTGTCGGTGCCACCCCGGCCACGCAGCTCTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS GCA 72 bp TTCCGCTCCTTCGCCGGCTCCGGCTCTTCCGGCCGCTaGGGGACCGGGACACATCAGCAGCAGAGGCGGAGC +
Preference number: 6 (lower is better)
Translates to: FRSFAGSGSSGR*GTGTHQQQRRS
Trigger: GCTCCGCCTCTGCTGCTGATGTGTCCCGGTCCCGCAGCGGCCGGAAGAGCCGGAGCCGGCGAAGGAGCGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 72 bp CTCATCCACTGCCGAGGCAGAGCTGCGTGGCCGGGGTaGCACCGACAGACTGCGGGCCAGCGACGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: LIHCRGRAAWPG*HRQTAGQRRVA
Trigger: AGCCACCCGTCGCTGGCCCGCAGTCTGTCGGTGCCACCCCGGCCACGCAGCTCTGCCTCGGCAGTGGATGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 72 bp GCTGGGAGGCTCATCCACTGCCGAGGCAGAGCTGCGTaGCCGGGGTGGCACCGACAGACTGCGGGCCAGCGA +
Preference number: 6 (lower is better)
Translates to: AGRLIHCRGRAA*PGWHRQTAGQR
Trigger: TCGCTGGCCCGCAGTCTGTCGGTGCCACCCCGGCCACGCAGCTCTGCCTCGGCAGTGGATGAGCCTCCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 72 bp GCCAGGTCCTTGGTGCCTGCACCAGGCTCAGCAAAGTaGACCACACGCCGACAGGCCTGGCCCTCGGGGCCC +
Preference number: 6 (lower is better)
Translates to: ARSLVPAPGSAK*TTRRQAWPSGP
Trigger: GGGCCCCGAGGGCCAGGCCTGTCGGCGTGTGGTCCACTTTGCTGAGCCTGGTGCAGGCACCAAGGACCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 90 bp CCACACGCCGACAGGCCTGGCCCTCGGGGCCCCGATCCAGCATGGTaGTGCGCCGCAGGGAGAAGCCAAAGTCTCCAGTGGGCCGTCGTT +
Preference number: 6 (lower is better)
Translates to: PHADRPGPRGPDPAW*CAAGRSQSLQWAVV
Trigger: AACGACGGCCCACTGGAGACTTTGGCTTCTCCCTGCGGCGCACAACCATGCTGGATCGGGGCCCCGAGGGCCAGGCCTGTCGGCGTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CCA 72 bp GCCGACAGGCCTGGCCCTCGGGGCCCCGATCCAGCATaGTTGTGCGCCGCAGGGAGAAGCCAAAGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: ADRPGPRGPDPA*LCAAGRSQSLQ
Trigger: CTGGAGACTTTGGCTTCTCCCTGCGGCGCACAACCATGCTGGATCGGGGCCCCGAGGGCCAGGCCTGTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CCA 72 bp CCAGGCTCAGCAAAGTGGACCACACGCCGACAGGCCTaGCCCTCGGGGCCCCGATCCAGCATGGTTGTGCGC +
Preference number: 6 (lower is better)
Translates to: PGSAKWTTRRQA*PSGPRSSMVVR
Trigger: GCGCACAACCATGCTGGATCGGGGCCCCGAGGGCCAGGCCTGTCGGCGTGTGGTCCACTTTGCTGAGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS TCA 72 bp CCGCGTCCCCGGTGCCCCCGATGGAGTCCTTTAGGGTaGGCCGCTTCCGATAGCTCAGGGAGCTCACCACCG +
Preference number: 6 (lower is better)
Translates to: PRPRCPRWSPLG*AASDSSGSSPP
Trigger: CGGTGGTGAGCTCCCTGAGCTATCGGAAGCGGCTCACCCTAAAGGACTCCATCGGGGGCACCGGGGACGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS GCA 72 bp GCTCAGGGGCTCGGGATCGGTGCCCTGGTCGAGGGATaGCTGGGCCAGGATGCTGCACCAGCTGTCCCTCTA +
Preference number: 6 (lower is better)
Translates to: AQGLGIGALVEG*LGQDAAPAVPL
Trigger: TAGAGGGACAGCTGGTGCAGCATCCTGGCCCAGGCATCCCTCGACCAGGGCACCGATCCCGAGCCCCTGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp AAGACTGCTTGCCGCGGGCCTTGTGCTCCTTGCCCCTaGCCCGAGACATCAGGCTCCGCAGGCCCAGGGAGA +
Preference number: 6 (lower is better)
Translates to: KTACRGPCAPCP*PETSGSAGPGR
Trigger: TCTCCCTGGGCCTGCGGAGCCTGATGTCTCGGGGCAGGGGCAAGGAGCACAAGGCCCGCGGCAAGCAGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS GCA 72 bp TCCCAGAAGACTGCTTGCCGCGGGCCTTGTGCTCCTTaGCCCTGCCCCGAGACATCAGGCTCCGCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: SQKTACRGPCAP*PCPETSGSAGP
Trigger: TGGGCCTGCGGAGCCTGATGTCTCGGGGCAGGGGCAAGGAGCACAAGGCCCGCGGCAAGCAGTCTTCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS GCA 72 bp TCCTGGCTGGAGGGCTTCTCCCCCTTCCCAGAAGACTaGTTGCCGCGGGCCTTGTGCTCCTTGCCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: SWLEGFSPFPED*LPRALCSLPLP
Trigger: GGGCAGGGGCAAGGAGCACAAGGCCCGCGGCAAGCAGTCTTCTGGGAAGGGGGAGAAGCCCTCCAGCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS CCA 72 bp CCGGGCCGTTCATGGCGAGTGTGGGTGCAGGGCTCCTaGCTCTCTGGGAAGTCTCTGGGGGTATCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: PGRSWRVWVQGS*LSGKSLGVSGW
Trigger: CCAGCCCGATACCCCCAGAGACTTCCCAGAGAGCCAGGAGCCCTGCACCCACACTCGCCATGAACGGCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS CAA 72 bp TTCCCAGAAGACTGCTTGCCGCGGGCCTTGTGCTCCTaGCCCCTGCCCCGAGACATCAGGCTCCGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: FPEDCLPRALCS*PLPRDIRLRRP
Trigger: GGGCCTGCGGAGCCTGATGTCTCGGGGCAGGGGCAAGGAGCACAAGGCCCGCGGCAAGCAGTCTTCTGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS GCA 72 bp TCATCCTGGCACTATCAGTCCAGGCCCTGGCCTGCGTaGACTCTGCCCCCTTCAGGCCCCAGGGAAGGACCC +
Preference number: 6 (lower is better)
Translates to: SSWHYQSRPWPA*TLPPSGPREGP
Trigger: GGGTCCTTCCCTGGGGCCTGAAGGGGGCAGAGTGCACGCAGGCCAGGGCCTGGACTGATAGTGCCAGGATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529578.5
CDS GCA 72 bp CCCATCATCCTGGCACTATCAGTCCAGGCCCTGGCCTaGGTGCACTCTGCCCCCTTCAGGCCCCAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: PIILALSVQALA*VHSAPFRPQGR
Trigger: CCTTCCCTGGGGCCTGAAGGGGGCAGAGTGCACGCAGGCCAGGGCCTGGACTGATAGTGCCAGGATGATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529578.5
CDS GCA 72 bp CGGTGCCCTGGTCGAGGGATGCCTGGGCCAGGATGCTaGACCAGCTGTCCCTCTAGAGTCCTCACCTCCACC +
Preference number: 6 (lower is better)
Translates to: RCPGRGMPGPGC*TSCPSRVLTST
Trigger: GGTGGAGGTGAGGACTCTAGAGGGACAGCTGGTGCAGCATCCTGGCCCAGGCATCCCTCGACCAGGGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp CAGCTCCTGCTGAGCTCGCTGAGCTCTGGAATGGGCTaGACCTTGAGCCGCACGCTGTCCCCTGACTGCCGG +
Preference number: 6 (lower is better)
Translates to: QLLLSSLSSGMG*TLSRTLSPDCR
Trigger: CCGGCAGTCAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTCCAGAGCTCAGCGAGCTCAGCAGGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp AGAGAGCAGCCCAGAGCCAGGCCTGTCAACGCCACCTaGTCCCAGCACACCCCAGTAGCCACTGTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: REQPRARPVNAT*SQHTPVATVPG
Trigger: CCCAGGCACAGTGGCTACTGGGGTGTGCTGGGAGCAGGTGGCGTTGACAGGCCTGGCTCTGGGCTGCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532143.2
CDS GCA 72 bp CAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTTaGGCCCAGCCACTGCAGGTTTGGTGGCTCCCGCAG +
Preference number: 6 (lower is better)
Translates to: QPSGPTHGGQTA*AQPLQVWWLPQ
Trigger: CTGCGGGAGCCACCAAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628822.2
CDS CAA 72 bp GCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTGCTaGCGCCCAGCCACTGCAGGTTTGGTGGCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: AAFWAHSWRANC*RPATAGLVAPA
Trigger: TGCGGGAGCCACCAAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628822.2
CDS CAA 90 bp GCTGCCCGCTGCAGCACCGAGCCACGGAAGCTACCCTCCTCACCCTaGAGGTCATCGCTGGAGCTGGCTGTACTTAGGTGGCCCGAGTCC +
Preference number: 6 (lower is better)
Translates to: AARCSTEPRKLPSSP*RSSLELAVLRWPES
Trigger: GGACTCGGGCCACCTAAGTACAGCCAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTAGCTTCCGTGGCTCGGTGCTGCAGCGGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp GATCGGTGCCCTGGTCGAGGGATGCCTGGGCCAGGATaGTGCACCAGCTGTCCCTCTAGAGTCCTCACCTCC +
Preference number: 6 (lower is better)
Translates to: DRCPGRGMPGPG*CTSCPSRVLTS
Trigger: GGAGGTGAGGACTCTAGAGGGACAGCTGGTGCAGCATCCTGGCCCAGGCATCCCTCGACCAGGGCACCGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp GAGCTGCTGCAGAGCCCGCTGACTCTCCTCACTATCTaGCTGCAGGTCCCCGAGCTAGGGGCCAAGATGGGG +
Preference number: 6 (lower is better)
Translates to: ELLQSPLTLLTI*LQVPELGAKMG
Trigger: CCCCATCTTGGCCCCTAGCTCGGGGACCTGCAGGCAGATAGTGAGGAGAGTCAGCGGGCTCTGCAGCAGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530557.2
CDS GCA 72 bp TGCAGGAGGGCTAGCTTCTCCCCAGTTCGTGCTTCTTaGGGCTCGCCTCGGCCTCCTTCCTGGCAAGCTCGC +
Preference number: 6 (lower is better)
Translates to: CRRASFSPVRAS*GSPRPPSWQAR
Trigger: GCGAGCTTGCCAGGAAGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGGGGAGAAGCTAGCCCTCCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531892.5
CDS GCA 72 bp TACGCAGCCTTCTGGGCCCACTCATGGCGGGCAAACTaGTTGCGCCCAGCCACTGCAGGTTTGGTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: YAAFWAHSWRAN*LRPATAGLVAP
Trigger: GGGAGCCACCAAACCTGCAGTGGCTGGGCGCAAGCAGTTTGCCCGCCATGAGTGGGCCCAGAAGGCTGCGTA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628822.2
CDS CCA 72 bp TCGAGTCGGGTGCTCGGGGGACTTGACTCCTCTGCCTaGGGTCTCCTTGGCATTCCCAAGCTCCTCGCTGGG +
Preference number: 6 (lower is better)
Translates to: SSRVLGGLDSSA*GLLGIPKLLAG
Trigger: CCCAGCGAGGAGCTTGGGAATGCCAAGGAGACCCCAGGCAGAGGAGTCAAGTCCCCCGAGCACCCGACTCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS CCA 72 bp CACTGGAGCAGCTGTGGCTGGAGACGGTCGAGCCGCTaGATGACGACGAGGAGGACTCAGACTCCGTCTCCG +
Preference number: 6 (lower is better)
Translates to: HWSSCGWRRSSR*MTTRRTQTPSP
Trigger: CGGAGACGGAGTCTGAGTCCTCCTCGTCGTCATCCAGCGGCTCGACCGTCTCCAGCCACAGCTGCTCCAGTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 72 bp CAGCTGGGCCCTTCTTCACACTGGAGCAGCTGTGGCTaGAGACGGTCGAGCCGCTGGATGACGACGAGGAGG +
Preference number: 6 (lower is better)
Translates to: QLGPSSHWSSCG*RRSSRWMTTRR
Trigger: CCTCCTCGTCGTCATCCAGCGGCTCGACCGTCTCCAGCCACAGCTGCTCCAGTGTGAAGAAGGGCCCAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CAA 90 bp CGAGTCGGGTGCTCGGGGGACTTGACTCCTCTGCCTGGGGTCTCCTaGGCATTCCCAAGCTCCTCGCTGGGCAGCACCTTACTCACCACC +
Preference number: 6 (lower is better)
Translates to: RVGCSGDLTPLPGVS*AFPSSSLGSTLLTT
Trigger: GGTGGTGAGTAAGGTGCTGCCCAGCGAGGAGCTTGGGAATGCCAAGGAGACCCCAGGCAGAGGAGTCAAGTCCCCCGAGCACCCGACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS TCA 72 bp CACCAGGGACTGGTGACTTGGACTGCTGCTCTCCAGTaGGGTCTGACTTCGGGCCGGTGGAGCCTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: HQGLVTWTAALQ*GLTSGRWSLGS
Trigger: TGACCCCAGGCTCCACCGGCCCGAAGTCAGACCTCACTGGAGAGCAGCAGTCCAAGTCACCAGTCCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531267.5
ENST00000533420.3
CDS TCA 72 bp GGAGCAGCTGTGGCTGGAGACGGTCGAGCCGCTGGATaGCGACGAGGAGGACTCAGACTCCGTCTCCGTTCT +
Preference number: 6 (lower is better)
Translates to: GAAVAGDGRAAG*RRGGLRLRLRS
Trigger: AGAACGGAGACGGAGTCTGAGTCCTCCTCGTCGTCATCCAGCGGCTCGACCGTCTCCAGCCACAGCTGCTCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 72 bp AATGACCCATCATCCTGGCACTATCAGTCCAGGCCCTaGCCTGCGTGCACTCTGCCCCCTTCAGGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: NDPSSWHYQSRP*PACTLPPSGPR
Trigger: CCTGGGGCCTGAAGGGGGCAGAGTGCACGCAGGCCAGGGCCTGGACTGATAGTGCCAGGATGATGGGTCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529578.5
CDS CCA 72 bp GTAGCTCAAGACCTCGTTGACGGCAGCCTCCAGGTCTaGGTCCAGGTAGGAGTGACGGCTGACGGAGCGGAC +
Preference number: 6 (lower is better)
Translates to: VAQDLVDGSLQV*VQVGVTADGAD
Trigger: GTCCGCTCCGTCAGCCGTCACTCCTACCTGGACCCAGACCTGGAGGCTGCCGTCAACGAGGTCTTGAGCTAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 72 bp TCTGCAGCTGGGCCCTTCTTCACACTGGAGCAGCTGTaGCTGGAGACGGTCGAGCCGCTGGATGACGACGAG +
Preference number: 6 (lower is better)
Translates to: SAAGPFFTLEQL*LETVEPLDDDE
Trigger: CTCGTCGTCATCCAGCGGCTCGACCGTCTCCAGCCACAGCTGCTCCAGTGTGAAGAAGGGCCCAGCTGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CAA 72 bp CTGCTGAGCTCGCTGAGCTCTGGAATGGGCTGCACCTaGAGCCGCACGCTGTCCCCTGACTGCCGGATCATC +
Preference number: 6 (lower is better)
Translates to: LLSSLSSGMGCT*SRTLSPDCRII
Trigger: GATGATCCGGCAGTCAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTCCAGAGCTCAGCGAGCTCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 90 bp AGCCAGCTCCTGCTGAGCTCGCTGAGCTCTGGAATGGGCTGCACCTaGAGCCGCACGCTGTCCCCTGACTGCCGGATCATCTCCACAATC +
Preference number: 6 (lower is better)
Translates to: SQLLLSSLSSGMGCT*SRTLSPDCRIISTI
Trigger: GATTGTGGAGATGATCCGGCAGTCAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTCCAGAGCTCAGCGAGCTCAGCAGGAGCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 90 bp ACCTTGGCAGCTCCTGCCTCCTGCTTCACACCAGGGACTGGTGACTaGGACTGCTGCTCTCCAGTGAGGTCTGACTTCGGGCCGGTGGAG +
Preference number: 6 (lower is better)
Translates to: TLAAPASCFTPGTGD*DCCSPVRSDFGPVE
Trigger: CTCCACCGGCCCGAAGTCAGACCTCACTGGAGAGCAGCAGTCCAAGTCACCAGTCCCTGGTGTGAAGCAGGAGGCAGGAGCTGCCAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS TCA 72 bp GCAGCACCGAGCCACGGAAGCTACCCTCCTCACCCTTaGGGTCATCGCTGGAGCTGGCTGTACTTAGGTGGC +
Preference number: 6 (lower is better)
Translates to: AAPSHGSYPPHP*GHRWSWLYLGG
Trigger: GCCACCTAAGTACAGCCAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTAGCTTCCGTGGCTCGGTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp GCCTCCTGCTTCACACCAGGGACTGGTGACTTGGACTaGTGCTCTCCAGTGAGGTCTGACTTCGGGCCGGTG +
Preference number: 6 (lower is better)
Translates to: ASCFTPGTGDLD*CSPVRSDFGPV
Trigger: CACCGGCCCGAAGTCAGACCTCACTGGAGAGCAGCAGTCCAAGTCACCAGTCCCTGGTGTGAAGCAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531267.5
ENST00000533420.3
CDS CCA 72 bp GGAGGGAGCATTAGCCTGTGTGGGAGGACAGGCGGGTaGGTATTAGAGCAGCAGAGCCCATCTCCGCTGCCA +
Preference number: 6 (lower is better)
Translates to: GGSISLCGRTGG*VLEQQSPSPLP
Trigger: TGGCAGCGGAGATGGGCTCTGCTGCTCTAATACCCACCCGCCTGTCCTCCCACACAGGCTAATGCTCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528322.6
CDS CAA 72 bp TGCTCGGGGGACTTGACTCCTCTGCCTGGGGTCTCCTaGGCATTCCCAAGCTCCTCGCTGGGCAGCACCTTA +
Preference number: 6 (lower is better)
Translates to: CSGDLTPLPGVS*AFPSSSLGSTL
Trigger: TAAGGTGCTGCCCAGCGAGGAGCTTGGGAATGCCAAGGAGACCCCAGGCAGAGGAGTCAAGTCCCCCGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS TCA 72 bp TGGGAAGTCTCTGGGGGTATCGGGCTGGTGGGAGGCTaGGGACTCCTAGATGGGCCACTGCCTTCCTTTGAG +
Preference number: 6 (lower is better)
Translates to: WEVSGGIGLVGG*GLLDGPLPSFE
Trigger: CTCAAAGGAAGGCAGTGGCCCATCTAGGAGTCCTCAGCCTCCCACCAGCCCGATACCCCCAGAGACTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533420.3
CDS GCA 72 bp AACTTTTTAGTCACTAGCTCAGGGGCTCGGGATCGGTaGCCTGGTCGAGGGATGCCTGGGCCAGGATGCTGC +
Preference number: 6 (lower is better)
Translates to: NFLVTSSGARDR*PGRGMPGPGCC
Trigger: GCAGCATCCTGGCCCAGGCATCCCTCGACCAGGGCACCGATCCCGAGCCCCTGAGCTAGTGACTAAAAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp AGCCTCACCCGCCGTTCCAGCTGCCTCTTGTTCTGCTaGTCCACCTCCAGCTTGTCCTCAAACTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SLTRRSSCLLFC*STSSLSSNSCW
Trigger: CCAGCAGGAGTTTGAGGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGAACGGCGGGTGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530557.2
ENST00000533652.1
CDS GCA 72 bp CTTGCTCCTGATTGCCCCTGCACCAAGAAGCTAACATaGCAGCCTCCCCGATCCATTCCAGCCAGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: LAPDCPCTKKLT*QPPRSIPARPA
Trigger: GGCAGGCCTGGCTGGAATGGATCGGGGAGGCTGGCATGTTAGCTTCTTGGTGCAGGGGCAATCAGGAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530557.2
ENST00000533652.1
CDS GCA 72 bp CGACGGCCGGTGCGTCTGCCCAGTTTCTTCACTTTCTaGAGCTGGGCCCTTCTTCACACTGGAGCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: RRPVRLPSFFTF*SWALLHTGAAV
Trigger: CACAGCTGCTCCAGTGTGAAGAAGGGCCCAGCTGCAGAAAGTGAAGAAACTGGGCAGACGCACCGGCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 72 bp CACAGGCTGCCAGAGCCTTTTCCGCTCTGTTGCTGCTaGGCTGTGGGGTCCAAGCCTCATCTGAGGGAGTCT +
Preference number: 6 (lower is better)
Translates to: HRLPEPFPLCCC*AVGSKPHLRES
Trigger: AGACTCCCTCAGATGAGGCTTGGACCCCACAGCCCAGCAGCAACAGAGCGGAAAAGGCTCTGGCAGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527312.5
CDS CCA 72 bp CCCTTGAGGTCATCGCTGGAGCTGGCTGTACTTAGGTaGCCCGAGTCCAGGATGACGCTGCCCCGGTTACTA +
Preference number: 6 (lower is better)
Translates to: PLRSSLELAVLR*PESRMTLPRLL
Trigger: TAGTAACCGGGGCAGCGTCATCCTGGACTCGGGCCACCTAAGTACAGCCAGCTCCAGCGATGACCTCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CCA 72 bp TCATCTGTGAGTTCTGCTTGGCCAGTGAGCCGAACTTaGCTGCCCGCTGCAGCACCGAGCCACGGAAGCTAC +
Preference number: 6 (lower is better)
Translates to: SSVSSAWPVSRT*LPAAAPSHGSY
Trigger: GTAGCTTCCGTGGCTCGGTGCTGCAGCGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 72 bp TGCAGCACCGAGCCACGGAAGCTACCCTCCTCACCCTaGAGGTCATCGCTGGAGCTGGCTGTACTTAGGTGG +
Preference number: 6 (lower is better)
Translates to: CSTEPRKLPSSP*RSSLELAVLRW
Trigger: CCACCTAAGTACAGCCAGCTCCAGCGATGACCTCAAGGGTGAGGAGGGTAGCTTCCGTGGCTCGGTGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 90 bp CGCTTGACAATCATCTGTGAGTTCTGCTTGGCCAGTGAGCCGAACTaGGCTGCCCGCTGCAGCACCGAGCCACGGAAGCTACCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: RLTIICEFCLASEPN*AARCSTEPRKLPSS
Trigger: TGAGGAGGGTAGCTTCCGTGGCTCGGTGCTGCAGCGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGATGATTGTCAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS TCA 72 bp TCCTCCAGCCGGTTCTGGATCTCATTCTTCTCACGCTaGAGGCGGCTCAGCTGCTCCTCCAGCTGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: SSSRFWISFFSR*RRLSCSSSWRE
Trigger: CTCTCTCCAGCTGGAGGAGCAGCTGAGCCGCCTTCAGCGTGAGAAGAATGAGATCCAGAACCGGCTGGAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529889.1
CDS TCA 72 bp GCGTCTTGGATTCACGCTTGGAGGAGCGGTTCAGGTTaGAGAAGCCACGTCGCAGGCTCATCTCCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: ASWIHAWRSGSG*RSHVAGSSPPG
Trigger: GCCTGGAGGAGATGAGCCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCTCCAAGCGTGAATCCAAGACGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS TCA 72 bp TGGAATGGGCTGCACCTTGAGCCGCACGCTGTCCCCTaGCTGCCGGATCATCTCCACAATCTCATCCCTGGA +
Preference number: 6 (lower is better)
Translates to: WNGLHLEPHAVP*LPDHLHNLIPG
Trigger: TCCAGGGATGAGATTGTGGAGATGATCCGGCAGTCAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp CTGCCCCGGTTACTATCGGAGTCAATGTCAGTCAGGTaGAGGTCAGAGCCGCTGGCCACCTTGATGGGGATG +
Preference number: 6 (lower is better)
Translates to: LPRLLSESMSVR*RSEPLATLMGM
Trigger: CATCCCCATCAAGGTGGCCAGCGGCTCTGACCTGCACCTGACTGACATTGACTCCGATAGTAACCGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp ATGGGCTGCACCTTGAGCCGCACGCTGTCCCCTGACTaGCGGATCATCTCCACAATCTCATCCCTGGACTTG +
Preference number: 6 (lower is better)
Translates to: MGCTLSRTLSPD*RIISTISSLDL
Trigger: CAAGTCCAGGGATGAGATTGTGGAGATGATCCGGCAGTCAGGGGACAGCGTGCGGCTCAAGGTGCAGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CCA 72 bp TTTCTTCACTTTCTGCAGCTGGGCCCTTCTTCACACTaGAGCAGCTGTGGCTGGAGACGGTCGAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: FLHFLQLGPSSH*SSCGWRRSSRW
Trigger: CCAGCGGCTCGACCGTCTCCAGCCACAGCTGCTCCAGTGTGAAGAAGGGCCCAGCTGCAGAAAGTGAAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CAA 72 bp CGCGTCTTGGATTCACGCTTGGAGGAGCGGTTCAGGTaGAAGAAGCCACGTCGCAGGCTCATCTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RVLDSRLEERFR*KKPRRRLISSR
Trigger: CCTGGAGGAGATGAGCCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCTCCAAGCGTGAATCCAAGACGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 72 bp ATCATCTGTGAGTTCTGCTTGGCCAGTGAGCCGAACTaGGCTGCCCGCTGCAGCACCGAGCCACGGAAGCTA +
Preference number: 6 (lower is better)
Translates to: IICEFCLASEPN*AARCSTEPRKL
Trigger: TAGCTTCCGTGGCTCGGTGCTGCAGCGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 90 bp ATTTCCAGGCGCGTCTTGGATTCACGCTTGGAGGAGCGGTTCAGGTaGAAGAAGCCACGTCGCAGGCTCATCTCCTCCAGGCTCCGAAGC +
Preference number: 6 (lower is better)
Translates to: ISRRVLDSRLEERFR*KKPRRRLISSRLRS
Trigger: GCTTCGGAGCCTGGAGGAGATGAGCCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCTCCAAGCGTGAATCCAAGACGCGCCTGGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 90 bp CGCTGGGAGAAGGAAAAGCGCTTGACAATCATCTGTGAGTTCTGCTaGGCCAGTGAGCCGAACTTGGCTGCCCGCTGCAGCACCGAGCCA +
Preference number: 6 (lower is better)
Translates to: RWEKEKRLTIICEFC*ASEPNLAARCSTEP
Trigger: TGGCTCGGTGCTGCAGCGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGATGATTGTCAAGCGCTTTTCCTTCTCCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 90 bp ACCCGCCGTTCCAGCTGCCTCTTGTTCTGCTGCTCCACCTCCAGCTaGTCCTCAAACTCCTGCTGGAGCCGTTTCTTGGTGAAGTCCACC +
Preference number: 6 (lower is better)
Translates to: TRRSSCLLFCCSTSS*SSNSCWSRFLVKST
Trigger: GGTGGACTTCACCAAGAAACGGCTCCAGCAGGAGTTTGAGGACAAGCTGGAGGTGGAGCAGCAGAACAAGAGGCAGCTGGAACGGCGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530557.2
ENST00000533652.1
CDS CAA 90 bp ATGGGGATGGGGTTGGAGATTTCCAGGCGCGTCTTGGATTCACGCTaGGAGGAGCGGTTCAGGTTGAAGAAGCCACGTCGCAGGCTCATC +
Preference number: 6 (lower is better)
Translates to: MGMGLEISRRVLDSR*EERFRLKKPRRRLI
Trigger: GATGAGCCTGCGACGTGGCTTCTTCAACCTGAACCGCTCCTCCAAGCGTGAATCCAAGACGCGCCTGGAAATCTCCAACCCCATCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 90 bp TGTTCTTCTGTTTTCGCCTCCTGCTTCACACCAGGGACTGGTGACTaGGACTGCTGCTCTCCAGTGAGGTCTGACTTCGGGCCGGTGGAG +
Preference number: 6 (lower is better)
Translates to: CSSVFASCFTPGTGD*DCCSPVRSDFGPVE
Trigger: CTCCACCGGCCCGAAGTCAGACCTCACTGGAGAGCAGCAGTCCAAGTCACCAGTCCCTGGTGTGAAGCAGGAGGCGAAAACAGAAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531267.5
CDS TCA 72 bp AAGTACTTTCCGGTCATGGGGGTGCTACCTGAGGGCTaGCACAGGCTGCCAGAGCCTTTTCCGCTCTGTTGC +
Preference number: 6 (lower is better)
Translates to: KYFPVMGVLPEG*HRLPEPFPLCC
Trigger: GCAACAGAGCGGAAAAGGCTCTGGCAGCCTGTGTCAGCCCTCAGGTAGCACCCCCATGACCGGAAAGTACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527312.5
CDS TCA 72 bp TGGAGCTGGCTGTACTTAGGTGGCCCGAGTCCAGGATaGCGCTGCCCCGGTTACTATCGGAGTCAATGTCAG +
Preference number: 6 (lower is better)
Translates to: WSWLYLGGPSPG*RCPGYYRSQCQ
Trigger: CTGACATTGACTCCGATAGTAACCGGGGCAGCGTCATCCTGGACTCGGGCCACCTAAGTACAGCCAGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS TCA 72 bp GCTGGAATGGAACAGGCTTGTAGCTCAAGACCTCGTTaGCGGCAGCCTCCAGGTCTGGGTCCAGGTAGGAGT +
Preference number: 6 (lower is better)
Translates to: AGMEQACSSRPR*RQPPGLGPGRS
Trigger: ACTCCTACCTGGACCCAGACCTGGAGGCTGCCGTCAACGAGGTCTTGAGCTACAAGCCTGTTCCATTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS GCA 72 bp TCTTCCTGTCATCCTCCTCGGAGTCGGGCTCCAGGCTaGTCCGCTGGAATGGAACAGGCTTGTAGCTCAAGA +
Preference number: 6 (lower is better)
Translates to: SSCHPPRSRAPG*SAGMEQACSSR
Trigger: TCTTGAGCTACAAGCCTGTTCCATTCCAGCGGAGCAGCCTGGAGCCCGACTCCGAGGAGGATGACAGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CAA 72 bp GGGTTGGAGATTTCCAGGCGCGTCTTGGATTCACGCTaGGAGGAGCGGTTCAGGTTGAAGAAGCCACGTCGC +
Preference number: 6 (lower is better)
Translates to: GLEISRRVLDSR*EERFRLKKPRR
Trigger: GCGACGTGGCTTCTTCAACCTGAACCGCTCCTCCAAGCGTGAATCCAAGACGCGCCTGGAAATCTCCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 72 bp GTTTTCGCCTCCTGCTTCACACCAGGGACTGGTGACTaGGACTGCTGCTCTCCAGTGAGGTCTGACTTCGGG +
Preference number: 6 (lower is better)
Translates to: VFASCFTPGTGD*DCCSPVRSDFG
Trigger: CCCGAAGTCAGACCTCACTGGAGAGCAGCAGTCCAAGTCACCAGTCCCTGGTGTGAAGCAGGAGGCGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531267.5
CDS CAA 90 bp GACGAGGAGGACTCAGACTCCGTCTCCGTTCTCTTTCTTCTCGACTaGGACTTCTTGCTCTTCCGAGAGCGCCCCTTCTTCCGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: DEEDSDSVSVLFLLD*DFLLFRERPFFRLL
Trigger: CAAGAGGCGGAAGAAGGGGCGCTCTCGGAAGAGCAAGAAGTCCAAGTCGAGAAGAAAGAGAACGGAGACGGAGTCTGAGTCCTCCTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS GCA 72 bp ACAGGCAGACCCTGGGCCTCTGAGCTGAATGACAGCTaGTTCCTGGCAGCTCCTTTGAGGCTAATGAGAAGG +
Preference number: 6 (lower is better)
Translates to: TGRPWASELNDS*FLAAPLRLMRR
Trigger: CCTTCTCATTAGCCTCAAAGGAGCTGCCAGGAAGCAGCTGTCATTCAGCTCAGAGGCCCAGGGTCTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529578.5
CDS GCA 72 bp AGGGGCTCTGAGATCAGCAAGGCCAACCTCCTTCTGTaGCGTGCAGGAGCTCCCTCCATCATCCCAAATGAA +
Preference number: 6 (lower is better)
Translates to: RGSEISKANLLL*RAGAPSIIPNE
Trigger: TTCATTTGGGATGATGGAGGGAGCTCCTGCACGGCACAGAAGGAGGTTGGCCTTGCTGATCTCAGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533399.1
CDS CAA 90 bp TCTGAGGCGCTCTCATCCCGGCTACGCTGGGAGAAGGAAAAGCGCTaGACAATCATCTGTGAGTTCTGCTTGGCCAGTGAGCCGAACTTG +
Preference number: 6 (lower is better)
Translates to: SEALSSRLRWEKEKR*TIICEFCLASEPNL
Trigger: CAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGATGATTGTCAAGCGCTTTTCCTTCTCCCAGCGTAGCCGGGATGAGAGCGCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 90 bp TGCCGGATCATCTCCACAATCTCATCCCTGGACTTGCTCTCCACATaGTGCCCATTAATCTCCACCAGTCGATCTCCTGGCACCAGCCCC +
Preference number: 6 (lower is better)
Translates to: CRIISTISSLDLLST*CPLISTSRSPGTSP
Trigger: GGGGCTGGTGCCAGGAGATCGACTGGTGGAGATTAATGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGATTGTGGAGATGATCCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 90 bp GACTCAGACTCCGTCTCCGTTCTCTTTCTTCTCGACTTGGACTTCTaGCTCTTCCGAGAGCGCCCCTTCTTCCGCCTCTTGTGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: DSDSVSVLFLLDLDF*LFRERPFFRLLCSE
Trigger: CTCAGAGCACAAGAGGCGGAAGAAGGGGCGCTCTCGGAAGAGCAAGAAGTCCAAGTCGAGAAGAAAGAGAACGGAGACGGAGTCTGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS GCA 72 bp AGGGCTAGCTTCTCCCCTAGATGGCCAGAAGAAGCCTaGTTCAAGTACTTTCCGGTCATGGGGGTGCTACCT +
Preference number: 6 (lower is better)
Translates to: RASFSPRWPEEA*FKYFPVMGVLP
Trigger: AGGTAGCACCCCCATGACCGGAAAGTACTTGAAGCAGGCTTCTTCTGGCCATCTAGGGGAGAAGCTAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527312.5
CDS GCA 72 bp GAGAAGGAAAAGCGCTTGACAATCATCTGTGAGTTCTaGTTGGCCAGTGAGCCGAACTTGGCTGCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: EKEKRLTIICEF*LASEPNLAARC
Trigger: GCAGCGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGATGATTGTCAAGCGCTTTTCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp CCGTCTCCGTTCTCTTTCTTCTCGACTTGGACTTCTTaGTCTTCCGAGAGCGCCCCTTCTTCCGCCTCTTGT +
Preference number: 6 (lower is better)
Translates to: PSPFSFFSTWTS*SSESAPSSASC
Trigger: ACAAGAGGCGGAAGAAGGGGCGCTCTCGGAAGAGCAAGAAGTCCAAGTCGAGAAGAAAGAGAACGGAGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS CCA 72 bp AGAAAAGGTCTGCCCAGAACAAATGACCCATCATCCTaGCACTATCAGTCCAGGCCCTGGCCTGCGTGCACT +
Preference number: 6 (lower is better)
Translates to: RKGLPRTNDPSS*HYQSRPWPACT
Trigger: AGTGCACGCAGGCCAGGGCCTGGACTGATAGTGCCAGGATGATGGGTCATTTGTTCTGGGCAGACCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529578.5
CDS CCA 72 bp AGCCCAGTTTGCAGGAGGGCTAGCTTCTCCCCTAGATaGCCAGAAGAAGCCTGCTTCAAGTACTTTCCGGTC +
Preference number: 6 (lower is better)
Translates to: SPVCRRASFSPR*PEEACFKYFPV
Trigger: GACCGGAAAGTACTTGAAGCAGGCTTCTTCTGGCCATCTAGGGGAGAAGCTAGCCCTCCTGCAAACTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527312.5
CDS CCA 72 bp GTCGAGGTTTCTGAGGCGCTCTCATCCCGGCTACGCTaGGAGAAGGAAAAGCGCTTGACAATCATCTGTGAG +
Preference number: 6 (lower is better)
Translates to: VEVSEALSSRLR*EKEKRLTIICE
Trigger: CTCACAGATGATTGTCAAGCGCTTTTCCTTCTCCCAGCGTAGCCGGGATGAGAGCGCCTCAGAAACCTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 72 bp AAGGAAAAGCGCTTGACAATCATCTGTGAGTTCTGCTaGGCCAGTGAGCCGAACTTGGCTGCCCGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: KEKRLTIICEFC*ASEPNLAARCS
Trigger: GCTGCAGCGGGCAGCCAAGTTCGGCTCACTGGCCAAGCAGAACTCACAGATGATTGTCAAGCGCTTTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 72 bp TCCGTCTCCGTTCTCTTTCTTCTCGACTTGGACTTCTaGCTCTTCCGAGAGCGCCCCTTCTTCCGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: SVSVLFLLDLDF*LFRERPFFRLL
Trigger: CAAGAGGCGGAAGAAGGGGCGCTCTCGGAAGAGCAAGAAGTCCAAGTCGAGAAGAAAGAGAACGGAGACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636100.1
CDS TCA 72 bp CAGGGATGCAGGAGGAAGTCGGGTCTCCCAGGGAACTaGAGAAGCTCTAATGATAGCTTGCTCCTGATTGCC +
Preference number: 6 (lower is better)
Translates to: QGCRRKSGLPGN*RSSNDSLLLIA
Trigger: GGCAATCAGGAGCAAGCTATCATTAGAGCTTCTTCAGTTCCCTGGGAGACCCGACTTCCTCCTGCATCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530557.2
ENST00000533652.1
CDS CAA 90 bp CTGTCCCCTGACTGCCGGATCATCTCCACAATCTCATCCCTGGACTaGCTCTCCACATTGTGCCCATTAATCTCCACCAGTCGATCTCCT +
Preference number: 6 (lower is better)
Translates to: LSPDCRIISTISSLD*LSTLCPLISTSRSP
Trigger: AGGAGATCGACTGGTGGAGATTAATGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGATTGTGGAGATGATCCGGCAGTCAGGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp TCCACAATCTCATCCCTGGACTTGCTCTCCACATTGTaGCCATTAATCTCCACCAGTCGATCTCCTGGCACC +
Preference number: 6 (lower is better)
Translates to: STISSLDLLSTL*PLISTSRSPGT
Trigger: GGTGCCAGGAGATCGACTGGTGGAGATTAATGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGATTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS TCA 72 bp CTAATGAGAAGGCAGAAAAGGTCTGCCCAGAACAAATaGCCCATCATCCTGGCACTATCAGTCCAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: LMRRQKRSAQNK*PIILALSVQAL
Trigger: CAGGGCCTGGACTGATAGTGCCAGGATGATGGGTCATTTGTTCTGGGCAGACCTTTTCTGCCTTCTCATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529578.5
CDS TCA 72 bp GGCACAGGGGAAGGCACTTCATACAGGTCTCCTCATTaGATCCTCATAACAACACACTTTCCGCATGGCCTG +
Preference number: 6 (lower is better)
Translates to: GTGEGTSYRSPH*ILITTHFPHGL
Trigger: CAGGCCATGCGGAAAGTGTGTTGTTATGAGGATTCAATGAGGAGACCTGTATGAAGTGCCTTCCCCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS TCA 72 bp CCTCTTCTGCTGCAATCTGTTCTTCTGTTTTCGCTATaGGCCAGGCACAGGGGAAGGCACTTCATACAGGTC +
Preference number: 6 (lower is better)
Translates to: PLLLQSVLLFSL*ARHRGRHFIQV
Trigger: GACCTGTATGAAGTGCCTTCCCCTGTGCCTGGCTCATAGCGAAAACAGAAGAACAGATTGCAGCAGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530254.6
CDS CAA 72 bp ATCTCCACAATCTCATCCCTGGACTTGCTCTCCACATaGTGCCCATTAATCTCCACCAGTCGATCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: ISTISSLDLLST*CPLISTSRSPG
Trigger: GCCAGGAGATCGACTGGTGGAGATTAATGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGATTGTGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS CAA 72 bp GACTGCCGGATCATCTCCACAATCTCATCCCTGGACTaGCTCTCCACATTGTGCCCATTAATCTCCACCAGT +
Preference number: 6 (lower is better)
Translates to: DCRIISTISSLD*LSTLCPLISTS
Trigger: ACTGGTGGAGATTAATGGGCACAATGTGGAGAGCAAGTCCAGGGATGAGATTGTGGAGATGATCCGGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527372.7
ENST00000531253.5
ENST00000533112.5
ENST00000628822.2
CDS GCA 72 bp AGAACCTTCTGCTTGTCCTCATACTCTTCCTCTAGCTaGACCTCCATCTGTTTTAACTGTTCCAGCATCTGG +
Preference number: 6 (lower is better)
Translates to: RTFCLSSYSSSS*TSICFNCSSIW
Trigger: CCAGATGCTGGAACAGTTAAAACAGATGGAGGTGCAGCTAGAGGAAGAGTATGAGGACAAGCAGAAGGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533112.5