RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYO16 (Homo sapiens)

Ensembl gene IDs: ENSG00000041515

Ensembl transcript IDs: ENST00000251041.10, ENST00000356711.7, ENST00000375857.6, ENST00000457511.7, ENST00000467639.1, ENST00000482793.1

Found 728 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGTGAGGGAATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTaGGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCT +
Preference number: 1 (lower is better)
Translates to: TVRESCSVSPGGRAL*DAAPTAQTSTWQRA
Trigger: AGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGATTCCCTCACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR GCA 90 bp CAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTaGTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGG +
Preference number: 1 (lower is better)
Translates to: QCKSRGTSAVRCSPY*SNQYMAACSFVLCR
Trigger: CCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR GCA 90 bp GAGGGAATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATaGAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTT +
Preference number: 1 (lower is better)
Translates to: EGIMQCKSRGTSAVR*SPYCSNQYMAACSF
Trigger: AAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGATTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR CCA 90 bp CAGAGTGTGCATGGATTGCTCCTTTCCTCCGCTACTCTCTCGCTCTaGCCACGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGG +
Preference number: 1 (lower is better)
Translates to: QSVHGLLLSSATLSL*PRPHFSQPLSCYLG
Trigger: CCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAAAGGAGCAATCCATGCACACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR TCA 90 bp CGACGAAAGCACATCAATGAACAAGGCCTTGCATTATGGGAGGGTTaGGGATATACAGTGAGGGAATCATGCAGTGTAAGTCCCGGGGGA +
Preference number: 1 (lower is better)
Translates to: RRKHINEQGLALWEG*GYTVRESCSVSPGG
Trigger: TCCCCCGGGACTTACACTGCATGATTCCCTCACTGTATATCCTCAACCCTCCCATAATGCAAGGCCTTGTTCATTGATGTGCTTTCGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR TCA 90 bp GAGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATaGACAAGGCCTTGCATTATGGGAGGGTTGAGGATATACAGTGAG +
Preference number: 1 (lower is better)
Translates to: EPLLRTFRQPTKAHQ*TRPCIMGGLRIYSE
Trigger: CTCACTGTATATCCTCAACCCTCCCATAATGCAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR GCA 90 bp AAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTaGTTGTGTACATTCTACAACAGACCTCACCATCTTCCTCAACTG +
Preference number: 1 (lower is better)
Translates to: KLPDCTWLVVSETQL*LCTFYNRPHHLPQL
Trigger: CAGTTGAGGAAGATGGTGAGGTCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
3UTR GCA 90 bp GCTGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTaGTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTT +
Preference number: 1 (lower is better)
Translates to: AVRCSPYCSNQYMAA*SFVLCRPLNEYDHF
Trigger: AAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR CCA 90 bp TCTGCTTGTGTACATTCTACAACAGACCTCACCATCTTCCTCAACTaGGAGCTTTTTGATGCTACGAAAATTGAATTAGATACTATAAGC +
Preference number: 1 (lower is better)
Translates to: SACVHSTTDLTIFLN*ELFDATKIELDTIS
Trigger: GCTTATAGTATCTAATTCAATTTTCGTAGCATCAAAAAGCTCCCAGTTGAGGAAGATGGTGAGGTCTGTTGTAGAATGTACACAAGCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251041.10
3UTR-3UTR GCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCTCCCAGCCTCTCTCTTaGTACCTAGGGGTAGCACAG +
Preference number: 2 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCSQPLS*YLGVAQ
Trigger: CTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGA...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR CAA 90 bp CGTGGAGAGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTaGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: RGEKPQRMSEGSLLL*QPGISRQFYFVSLQ
Trigger: CTGCAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCTCTCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR GCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGACGAGCGCTGTGCGATaGAGCCCCTACTGCTCAAAC +
Preference number: 2 (lower is better)
Translates to: TAQNFPTADESTSMNKALTSAVR*SPYCSN
Trigger: GTTTGAGCAGTAGGGGCTGCATCGCACAGCGCTCGT...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR CCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGTGAGTGAGCAATCATaGCTCCTGAGCCAAACATGG +
Preference number: 2 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCVSEQS*LLSQTW
Trigger: CCATGTTTGGCTCAGGAGCCATGATTGCTCACTCAC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
3UTR-3UTR CCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTTTTTGTCTAAATGCGTaGAGAGAAGCCCCAGCGCAT +
Preference number: 2 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRFCLNA*REAPAH
Trigger: ATGCGCTGGGGCTTCTCTCCACGCATTTAGACAAAA...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR CAA 90 bp ATGCGTGGAGAGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTaGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTG +
Preference number: 2 (lower is better)
Translates to: MRGEKPQRMSEGSLL*LQPGISRQFYFVSL
Trigger: CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCTCTCCACGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR CAA 90 bp AGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGCATGGATaGCTCCTTTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACAC +
Preference number: 2 (lower is better)
Translates to: RLLNRRKTTVQSVHG*LLSSATLSLWPRPH
Trigger: GTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAAAGGAGCAATCCATGCACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR GCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACCAACTGTACAGAGTGTaGATGGATTGCTCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: SSKTRWSGATAQNFPTADQLYRV*MDCSFP
Trigger: AGGAAAGGAGCAATCCATGCACACTCTGTACAGTTG...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR CAA 90 bp CTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTaGTGTACATTCTACAACAGACCTCACCATCTTCCTCAACTGGGA +
Preference number: 2 (lower is better)
Translates to: LPDCTWLVVSETQLC*CTFYNRPHHLPQLG
Trigger: TCCCAGTTGAGGAAGATGGTGAGGTCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
3UTR-3UTR GCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGCAGCCTTCTGTTGTTaGAGCCCGGAATCAGTAGGC +
Preference number: 2 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNAAFCC*SPESVG
Trigger: GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGC...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR GCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCAGTACATGGCAGCGTaGTCATTTGTACTGTGTAGG +
Preference number: 2 (lower is better)
Translates to: SHCSELSDSRRKHINEQGQYMAA*SFVLCR
Trigger: CCTACACAGTACAAATGAGCACGCTGCCATGTACTG...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR GCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGGGGGACGAGCGCTGTaGGATGCAGCCCCTACTGCT +
Preference number: 2 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLGGRAL*DAAPTA
Trigger: AGCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCC...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR TCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCTCCTGTGATCTATGCTaGAGTCGGGAGGTGAAATTT +
Preference number: 2 (lower is better)
Translates to: SHCSELSDSRRKHINEQGSCDLC*SREVKF
Trigger: AAATTTCACCTCCCGACTTCAGCATAGATCACAGGA...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR CCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACCTCCTGAGCCAAACATaGCCCACTGCCTGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYLLSQT*PTACFC
Trigger: ACAAAAACAGGCAGTGGGCCATGTTTGGCTCAGGAG...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251041.10
3UTR-3UTR TCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACGCTTTTATGATAGAGTaGGTGAGCAATCATGGCTCC +
Preference number: 2 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYAFMIE*VSNHGS
Trigger: GGAGCCATGATTGCTCACTCACTCTATCATAAAAGC...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
3UTR-3UTR TCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCATCCTGTGATCTATGCTaGAGTCGGGAGGTGAAATTT +
Preference number: 2 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPSCDLC*SREVKF
Trigger: AAATTTCACCTCCCGACTTCAGCATAGATCACAGGA...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR GCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAAGCAGAGGTGAGTAACTaGAACAAGGATCTTATGGTG +
Preference number: 2 (lower is better)
Translates to: LYLVSGLRDSALLVYILQAEVSN*NKDLMV
Trigger: CACCATAAGATCCTTGTTGCAGTTACTCACCTCTGC...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
3UTR-3UTR GCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGACAGTGAGGGAATCATaGAGTGTAAGTCCCGGGGGA +
Preference number: 2 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLTVRES*SVSPGG
Trigger: TCCCCCGGGACTTACACTGCATGATTCCCTCACTGT...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR GCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAAGAGTGTGCATGGATTaGTCCTTTCCTCCGCTACTC +
Preference number: 2 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTRVCMD*SFPPLL
Trigger: GAGTAGCGGAGGAAAGGAGCAATCCATGCACACTCT...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR CAA 90 bp TCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTaGAATGAATATGATCATTTTACACCACCGGCTATGGATTTGAAG +
Preference number: 2 (lower is better)
Translates to: SNQYMAACSFVLCRP*NEYDHFTPPAMDLK
Trigger: CTTCAAATCCATAGCCGGTGGTGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR TCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGACGAAAGCACATCAATaGACAAGGCCTTGCATTATG +
Preference number: 2 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLTKAHQ*TRPCIM
Trigger: CATAATGCAAGGCCTTGTTCATTGATGTGCTTTCGT...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR GCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGACGTGTTTAACCGTGTaGCATGTGATTTCCTGTGAT +
Preference number: 2 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLTCLTV*HVISCD
Trigger: ATCACAGGAAATCACATGGCACACGGTTAAACACGT...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR CCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGTGTATCACCACGAGATaGATAAGAAAGAACCCACAC +
Preference number: 2 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVCITTR*IRKNPH
Trigger: GTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACA...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR GCA 72 bp ATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATaGAGCCCCTACTGCTCAAACCAGTACATGGCAGCG +
Preference number: 3 (lower is better)
Translates to: MQCKSRGTSAVR*SPYCSNQYMAA
Trigger: CGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR GCA 72 bp TCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTaGTCAAACCAGTACATGGCAGCGTGCTCATTTGTA +
Preference number: 3 (lower is better)
Translates to: SRGTSAVRCSPY*SNQYMAACSFV
Trigger: TACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR GCA 72 bp GAATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTaGGATGCAGCCCCTACTGCTCAAACCAGTACATGG +
Preference number: 3 (lower is better)
Translates to: ESCSVSPGGRAL*DAAPTAQTSTW
Trigger: CCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR CAA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACTCAATGAACAAGGCCTaGCATTATGGGAGGGTTGAG +
Preference number: 3 (lower is better)
Translates to: SSKTRWSGATAQNFPTADSMNKA*HYGRVE
Trigger: CTCAACCCTCCCATAATGCAAGGCCTTGTTCATTGA...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR CAA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCGGCAGCCTTCTGTTGTaGCAGCCCGGAATCAGTAGG +
Preference number: 3 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLGSLLL*QPGISR
Trigger: CCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCC...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR GCA 72 bp ACCGTAGAAAAACAACTGTACAGAGTGTGCATGGATTaGTCCTTTCCTCCGCTACTCTCTCGCTCTGGCCAC +
Preference number: 3 (lower is better)
Translates to: TVEKQLYRVCMD*SFPPLLSRSGH
Trigger: GTGGCCAGAGCGAGAGAGTAGCGGAGGAAAGGAGCAATCCATGCACACTCTGTACAGTTGTTTTTCTACGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR CAA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAAGGCAGCCTTCTGTaGTTGCAGCCCGGAATCAGT +
Preference number: 3 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNEGSLL*LQPGIS
Trigger: ACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR CAA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACAGAAGGCAGCCTTCTGTaGTTGCAGCCCGGAATCAGT +
Preference number: 3 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTEGSLL*LQPGIS
Trigger: ACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR CAA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATCAGAGTGTGCATGGATaGCTCCTTTCCTCCGCTACT +
Preference number: 3 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNQSVHG*LLSSAT
Trigger: AGTAGCGGAGGAAAGGAGCAATCCATGCACACTCTG...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR TCA 72 bp CTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATaGACAAGGCCTTGCATTATGGGAGGGTTGAGGATA +
Preference number: 3 (lower is better)
Translates to: LRTFRQPTKAHQ*TRPCIMGGLRI
Trigger: TATCCTCAACCCTCCCATAATGCAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR CAA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTCAACTGGGAGCTTTTaGATGCTACGAAAATTGAAT +
Preference number: 3 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCSTGSF*MLRKLN
Trigger: ATTCAATTTTCGTAGCATCAAAAAGCTCCCAGTTGA...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251041.10
3UTR GCA 72 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTaGTTGTGTACATTCTACAACAGACCTCACCATCTT +
Preference number: 3 (lower is better)
Translates to: DCTWLVVSETQL*LCTFYNRPHHL
Trigger: AAGATGGTGAGGTCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
3UTR GCA 72 bp TGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTaGTCATTTGTACTGTGTAGGCCTTTGAATGAATAT +
Preference number: 3 (lower is better)
Translates to: CSPYCSNQYMAA*SFVLCRPLNEY
Trigger: ATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR CAA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGGGCAGCCTTCTGTTGTaGCAGCCCGGAATCAGTAGG +
Preference number: 3 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQGSLLL*QPGISR
Trigger: CCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCC...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR TCA 72 bp CACATCAATGAACAAGGCCTTGCATTATGGGAGGGTTaGGGATATACAGTGAGGGAATCATGCAGTGTAAGT +
Preference number: 3 (lower is better)
Translates to: HINEQGLALWEG*GYTVRESCSVS
Trigger: ACTTACACTGCATGATTCCCTCACTGTATATCCTCAACCCTCCCATAATGCAAGGCCTTGTTCATTGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR-3UTR CAA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAATCACATCCATTTGTATaGTCTACAGCTGTTTTTCAC +
Preference number: 3 (lower is better)
Translates to: LYLVSGLRDSALLVYILQSHPFV*STAVFH
Trigger: GTGAAAAACAGCTGTAGACAATACAAATGGATGTGA...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251041.10
3UTR-3UTR CAA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACTACAGTCACATCCATTaGTATTGTCTACAGCTGTTT +
Preference number: 3 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNYSHIH*YCLQLF
Trigger: AAACAGCTGTAGACAATACAAATGGATGTGACTGTA...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
3UTR TCA 72 bp ATGAATATGATCATTTTACACCACCGGCTATGGATTTaGAGCCATACGTGTTTAACCGTGTGCCATGTGATT +
Preference number: 3 (lower is better)
Translates to: MNMIILHHRLWI*SHTCLTVCHVI
Trigger: AATCACATGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATGATCATATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCCTCGGCCGGACCCGTTaGACAGCGCCAGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCLGRTR*TAPGRG
Trigger: CCCCCGGCCTGGCGCTGTTCAACGGGTCCGGCCGAG...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCCGTTGGCCGCTTCCCTaGCCGCGGAGAGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCRWPLP*PRRGRR
Trigger: GCGCCTGCCTCTCCGCGGCCAGGGAAGCGGCCAACG...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCCTCGGCCGGACCCGTTaGACAGCGCCAGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGLGRTR*TAPGRG
Trigger: CCCCCGGCCTGGCGCTGTTCAACGGGTCCGGCCGAG...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCGGCGGCGATGCGCCGTaGAGCAGGAAGGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGGGDAP*SRKEPA
Trigger: CGCGGGCTCCTTCCTGCTCCACGGCGCATCGCCGCC...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCTGGAGCCGGCCTTCCTaGCGTCCGCCCTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLWSRPS*RPPWWP
Trigger: AGGCCACCAGGGCGGACGCCAGGAAGGCCGGCTCCA...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCTCGCCGTCGCCCTTCTaGCTCTTGGAGTACTGCGGG +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCSPSPF*LLEYCG
Trigger: CCCGCAGTACTCCAAGAGCCAGAAGGGCGACGGCGA...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTTGGAGCCGGCCTTCCTaGCGTCCGCCCTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRWSRPS*RPPWWP
Trigger: AGGCCACCAGGGCGGACGCCAGGAAGGCCGGCTCCA...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCAATCCAGTGTGGCCCTaGTGGCGCCAGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLNPVWP*WRQPCR
Trigger: CCTGCAGGGCTGGCGCCAGCAGGGCCACACTGGATT...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTGAGCAGGGGCGGCGATaGGCCGTGGAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSREQGRR*AVEQEG
Trigger: TCCTTCCTGCTCCACGGCGCATCGCCGCCCCTGCTC...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTGGGGGAGGCACCCTaGGCTCAGCGTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESVGEAP*AQRGAG
Trigger: TCCTGCACCACGCTGAGCCCAGGGTGCCTCCCCCAC...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTGTGGGGGAGGCACCCTaGGCTCAGCGTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRVGEAP*AQRGAG
Trigger: TCCTGCACCACGCTGAGCCCAGGGTGCCTCCCCCAC...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGAGGGTGTGGGGGTCTaGCCCCTCCTTCAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCEGVGV*PLLQEP
Trigger: CGGCTCCTGAAGGAGGGGGCAGACCCCCACACCCTC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCCTTCTTGCAAGGTGGTaGGGGAGGCACCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLLLARW*GRHPGL
Trigger: GAGCCCAGGGTGCCTCCCCCACCACCTTGCAAGAAG...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCCTTCTTGCAAGGTGGTaGGGGAGGCACCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGLLARW*GRHPGL
Trigger: GAGCCCAGGGTGCCTCCCCCACCACCTTGCAAGAAG...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCTGCTGTCATCCATGCTaGACACCGAGTGCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCCCHPC*TPSAAK
Trigger: CTTCGCTGCACTCGGTGTTCAGCATGGATGACAGCA...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCTTTGCTCACAGCGCATaGGCTTCACTAGACGCTGCC +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCFAHSA*ASLDAA
Trigger: GGCAGCGTCTAGTGAAGCGCATGCGCTGTGAGCAAA...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGGGGGGCAGCGCGCACTaGGGAGTCCCGGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALGGSAH*GVPGVR
Trigger: TCTGACCCCCGGGACTCCGCAGTGCGCGCTGCCCCC...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCCTGGGCTCAGCGTGGTaGAGGATCTGCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGLGSAW*RICCQS
Trigger: AGACTGGCAGCAGATCCTGCACCACGCTGAGCCCAG...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCGCGAAGGAGACCAGATaGACGGGCCAACGAGGCACT +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLAKETR*TGQRGT
Trigger: AGTGCCTCGTTGGCCCGTCCATCTGGTCTCCTTCGC...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTGGTCCCTCTTTGGCTTaGGCGGGGGCTGTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRGPSLA*AGAVSV
Trigger: CACGGAAACAGCCCCCGCCCAAGCCAAAGAGGGACC...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCGGGCCAGAGCTTCGTTaGCCGCTTCCCTGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SHCSELSDSRRKHINEQGGPELR*PLPWPR
Trigger: CCGCGGCCAGGGAAGCGGCCAACGAAGCTCTGGCCC...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACGCTTTGGGTGAACCTTaGGCGCCTCTGCGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADALGEP*APLRSA
Trigger: GGCCGAGCGCAGAGGCGCCCAAGGTTCACCCAAAGC...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGAGTTTGGCTTTGGGTaGACCTTGGGCGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESEFGFG*TLGASA
Trigger: CGCAGAGGCGCCCAAGGTTCACCCAAAGCCAAACTC...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCATCTGGAATCCAGTGTaGCCCTGCTGGCGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCIWNPV*PCWRQP
Trigger: GGGCTGGCGCCAGCAGGGCCACACTGGATTCCAGAT...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACATCTGGAATCCAGTGTaGCCCTGCTGGCGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADIWNPV*PCWRQP
Trigger: GGGCTGGCGCCAGCAGGGCCACACTGGATTCCAGAT...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCTGCTGTCATCCATGCTaGACACCGAGTGCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLCCHPC*TPSAAK
Trigger: CTTCGCTGCACTCGGTGTTCAGCATGGATGACAGCA...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCGGCATTAGCTTGACCTaGTCGGGTTTGGTGGAACCG +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGGISLT*SGLVEP
Trigger: CGGTTCCACCAAACCCGAGCAGGTCAAGCTAATGCC...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCAGGGGGCAGCGCGCACTaGGGAGTCCCGGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPGGSAH*GVPGVR
Trigger: TCTGACCCCCGGGACTCCGCAGTGCGCGCTGCCCCC...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAACGAGCGCTGTGCGATaGAGCCCCTACTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESTSAVR*SPYCSN
Trigger: GTTTGAGCAGTAGGGGCTGCATCGCACAGCGCTCGT...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCGTGGTCTGGAGCCACTaGTCAGAACTTTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGVVWSH*SELSDS
Trigger: GCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCAC...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCACCTGCTCGGGTTTGGTaGAACCGCTCATCATGGGGT +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESPARVW*NRSSWG
Trigger: ACCCCATGATGAGCGGTTCCACCAAACCCGAGCAGG...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGCGTTGGCCGCTTCCCTaGCCGCGGAGAGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLRWPLP*PRRGRR
Trigger: GCGCCTGCCTCTCCGCGGCCAGGGAAGCGGCCAACG...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGGGCGGCGATGCGCCGTaGAGCAGGAAGGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLGGDAP*SRKEPA
Trigger: CGCGGGCTCCTTCCTGCTCCACGGCGCATCGCCGCC...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCACACGGGGGCAGAGTTTaGCTTTGGGTGAACCTTGGG +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESHGGRV*LWVNLG
Trigger: CCCAAGGTTCACCCAAAGCCAAACTCTGCCCCCGTG...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGGGAATATGGGATCTTaGGGAAGGAGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESGNMGS*GRSCRA
Trigger: GGCCCTGCAGCTCCTTCCCCAAGATCCCATATTCCC...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCGATGGATTACCTGAGTaGTGTGACTGTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCDGLPE*CDCPCV
Trigger: GACACAGGGACAGTCACACCACTCAGGTAATCCATC...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCGGCCACATCAAATGGTaGTGTCCCAGAGCTCAGACG +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLGHIKW*CPRAQT
Trigger: CGTCTGAGCTCTGGGACACCACCATTTGATGTGGCC...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTCCCGGAAGAGCTGGTaGAAGGCTCTCTCCACACAG +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCSRKSW*KALSTQ
Trigger: CTGTGTGGAGAGAGCCTTTCACCAGCTCTTCCGGGA...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACTCCCGGAAGAGCTGGTaGAAGGCTCTCTCCACACAG +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADSRKSW*KALSTQ
Trigger: CTGTGTGGAGAGAGCCTTTCACCAGCTCTTCCGGGA...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCCTGAGGATGAAACACTaGGGCCGCTGTTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCLRMKH*GRCSRK
Trigger: CTTCCGGGAACAGCGGCCTCAGTGTTTCATCCTCAG...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCCAGTGGCTTATACCTTaGCAGGAAATCCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCQWLIP*QEIREG
Trigger: TCCTTCTCGGATTTCCTGTCAAGGTATAAGCCACTG...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAACATCGCTCGGCAGCTaGCTGTTCCTTCTTCTCACG +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESTSLGS*LFLLLT
Trigger: CGTGAGAAGAAGGAACAGTCAGCTGCCGAGCGATGT...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCCACGAGGTGTGGGTTTaGCTGATGCATCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGHEVWV*LMHQEK
Trigger: CTTCTCCTGATGCATCAGGCAAACCCACACCTCGTG...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTCGACCCCTCCGGCTaGACGGGGTACTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SHCSELSDSRRKHINEQGLDPSG*TGYLRL
Trigger: CAACCTCAAGTACCCCGTGCAGCCGGAGGGGTCGAG...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTGCAGCCTTCTGTTGTTaGAGCCCGGAATCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRAAFCC*SPESVG
Trigger: GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGC...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCCGATGCAGCCCCTACTaGTCAAACCAGTACATGGCA +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLRCSPY*SNQYMA
Trigger: TGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCG...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTTGTTGGGGCTGCGCTTaGGCTTTCGAGGAGGAATCT +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRCWGCA*AFEEES
Trigger: AGATTCCTCCTCGAAAGCCCAAGCGCAGCCCCAACA...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCGCTCAAACCAGTACATaGCAGCGTGCTCATTTGTAC +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCAQTST*QRAHLY
Trigger: GTACAAATGAGCACGCTGCCATGTACTGGTTTGAGC...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCCTTCATCTGGCGCAGTaGGGTCAAATCCACTCCATT +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLLHLAQ*GQIHSI
Trigger: AATGGAGTGGATTTGACCTCACTGCGCCAGATGAAG...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGCTTCCCTGAGGAGCTaGAATACAGCTGGGACACCA +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCASLRS*NTAGTP
Trigger: TGGTGTCCCAGCTGTATTTCAGCTCCTCAGGGAAGC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACGCTTCCCTGAGGAGCTaGAATACAGCTGGGACACCA +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADASLRS*NTAGTP
Trigger: TGGTGTCCCAGCTGTATTTCAGCTCCTCAGGGAAGC...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTCTGTACCGTGGTCTTTaGGGGCAACATTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRLYRGL*GQHSHS
Trigger: GGAATGGGAATGTTGCCCTCAAAGACCACGGTACAG...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCCTGTCATTTTCTTACTaGGCAGGGCAGACTTATGTC +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCLSFSY*AGQTYV
Trigger: GACATAAGTCTGCCCTGCTCAGTAAGAAAATGACAG...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTTGCTCACAGCGCATaGGCTTCACTAGACGCTGCC +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCFAHSA*ASLDAA
Trigger: GGCAGCGTCTAGTGAAGCGCATGCGCTGTGAGCAAA...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCTTCGGATTCTTCGCATaGTTCAGCCTTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCFGFFA*FSLFRN
Trigger: GTTCCTGAAAAGGCTGAAGCATGCGAAGAATCCGAA...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCACACGAGGTGTGGGTTTaGCTGATGCATCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESHEVWV*LMHQEK
Trigger: CTTCTCCTGATGCATCAGGCAAACCCACACCTCGTG...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACAGCAGGGGCGGCCGGTaGGGCAGCAGGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHSRGGR*GSRLGK
Trigger: CTTCCCCAACCTGCTGCCGCACCGGCCGCCCCTGCT...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAACCTTGGGCGCCTCTaGGCTCGGCCCCGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLNLGRL*ARPRFP
Trigger: GGGAAAGCGGGGCCGAGCGCAGAGGCGCCCAAGGTT...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACATCTTGGGGAAGGAGCTaGAGGGCCCGGCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTSWGRS*RARPRG
Trigger: CCCCCGTGGCCGGGCCCTGCAGCTCCTTCCCCAAGA...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTTGGTGCAGGATCTGCTaGCAGTCTTGTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRWCRIC*QSCPSS
Trigger: TGAGGAAGGACAAGACTGGCAGCAGATCCTGCACCA...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCTCTTTGTCATTGTGGTaGATAATCGCGTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCSLSLW*IIASCS
Trigger: GCTACAGGACGCGATTATCCACCACAATGACAAAGA...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCCCTGGAGAAGGACATTaGCTCCAGCTAATACAAGAA +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCPGEGH*LQLIQE
Trigger: TTCTTGTATTAGCTGGAGCCAATGTCCTTCTCCAGG...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCGACTGTACAGGGACTTaGCCAAGAGGTCTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLDCTGT*PRGLGK
Trigger: TTTTCCGAGACCTCTTGGCCAAGTCCCTGTACAGTC...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTGACATGGAGCTGGGGTaGAAATGCCTGGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICDMELG*KCLGPL
Trigger: GAGTGGACCCAGGCATTTCCACCCCAGCTCCATGTC...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAGGGCCAACGAGGCACTaGCCCAGGCCATCCACGGCC +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLGPTRH*PRPSTA
Trigger: GGCCGTGGATGGCCTGGGCCAGTGCCTCGTTGGCCC...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCGTTGGGGTCCCTCTTTaGCTTGGGCGGGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SHCSELSDSRRKHINEQGVGVPL*LGRGLF
Trigger: AAACAGCCCCCGCCCAAGCCAAAGAGGGACCCCAAC...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCCGTCGCTGTGCGGTCTaGGCCGGGCCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLRRCAV*AGPELR
Trigger: ACGAAGCTCTGGCCCGGCCCAGACCGCACAGCGACG...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCACGTCGCTGTGCGGTCTaGGCCGGGCCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPRRCAV*AGPELR
Trigger: ACGAAGCTCTGGCCCGGCCCAGACCGCACAGCGACG...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTGCTTCTTCAGAAGGCTaGGCTTCTTGCAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRASSEG*ASCKVV
Trigger: CACCACCTTGCAAGAAGCCCAGCCTTCTGAAGAAGC...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACGCTACTCTCTCGCTCTaGCCACGTCCACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADATLSL*PRPHFS
Trigger: GGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGC...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCCAAGACAAGGTGGTCTaGAGCCACTGCTCAGAACTT +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLQDKVV*SHCSEL
Trigger: AAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTG...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTAGTAGCAAGACAAGGTaGTCTGGAGCCACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRSSKTR*SGATAQ
Trigger: CTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCAACCCTTCCTGCTTCTaGAAAGCCTTCTCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCNPSCF*KAFSRS
Trigger: TGAGCGCGAGAAGGCTTTTCAGAAGCAGGAAGGGTT...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTGCTTCCCTGAGGAGCTaGAATACAGCTGGGACACCA +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICASLRS*NTAGTP
Trigger: TGGTGTCCCAGCTGTATTTCAGCTCCTCAGGGAAGC...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGGAACACAGCTTCCCTaGGGAGCTGAAATACAGCTG +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCGTQLP*GAEIQL
Trigger: CAGCTGTATTTCAGCTCCTCAGGGAAGCTGTGTTCC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGGCTTCAGACTTTCCTaGTCCCCTTTCTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCGFRLS*SPFSTE
Trigger: CTCAGTGGAGAAAGGGGATCAGGAAAGTCTGAAGCC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTTGTGATGCTATGGTaGCTGGATCTCCTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESVVMLW*LDLLVP
Trigger: TGGAACGAGGAGATCCAGTCACCATAGCATCACAAC...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCCAGTGGCTTATACCTTaGCAGGAAATCCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLQWLIP*QEIREG
Trigger: TCCTTCTCGGATTTCCTGTCAAGGTATAAGCCACTG...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGGCTGCACGGGGTACTTaGGGTTGGTCTCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALAARGT*GWSPGL
Trigger: CAGTCCTGGAGACCAACCTCAAGTACCCCGTGCAGC...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCCTCGGAAGTAATTTCTaGCGTACTAGGGTCATCTCG +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGLGSNF*RTRVIS
Trigger: CGAGATGACCCTAGTACGTCAGAAATTACTTCCGAG...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACGAGGGTGTGGGGGTCTaGCCCCTCCTTCAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHEGVGV*PLLQEP
Trigger: CGGCTCCTGAAGGAGGGGGCAGACCCCCACACCCTC...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTCTGGCCATATTTGGCTaGCAAGTGGAGGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICLAIFG*QVEGSP
Trigger: TGGACTCCCCTCCACTTGGCAGCCAAATATGGCCAG...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTGGGGTTTTCAGGGATaGTGTCCTGAGACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCWGFQG*CPETAA
Trigger: AGCAGCAGTCTCAGGACAGCATCCCTGAAAACCCCA...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAATCCAGTGTGGCCCTaGTGGCGCCAGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNNPVWP*WRQPCR
Trigger: CCTGCAGGGCTGGCGCCAGCAGGGCCACACTGGATT...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCACGCTCCCCTGTGGATaGATCATCCTGTATGGTCTG +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCTLPCG*IILYGL
Trigger: CAGACCATACAGGATGATGCATCCACAGGGGAGCGT...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACGAGCAGGGGCGGCGATaGGCCGTGGAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHEQGRR*AVEQEG
Trigger: TCCTTCCTGCTCCACGGCGCATCGCCGCCCCTGCTC...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTATGGCTCTTGGAGTACTaGGGGGACAGCGGGCTCGAC +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVWLLEY*GDSGLD
Trigger: GTCGAGCCCGCTGTCCCCGCAGTACTCCAAGAGCCA...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACAAACCTTGGGCGCCTCTaGGCTCGGCCCCGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTNLGRL*ARPRFP
Trigger: GGGAAAGCGGGGCCGAGCGCAGAGGCGCCCAAGGTT...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGCAGACGGCAGCCTGTTaGAGGAGGCCCCTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLQTAAC*RRPLPA
Trigger: AGCCGGAAGGGGCCTCCTGCAACAGGCTGCCGTCTG...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCACGAGCGCTGTGCGATaGAGCCCCTACTGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SHCSELSDSRRKHINEQGTSAVR*SPYCSN
Trigger: GTTTGAGCAGTAGGGGCTGCATCGCACAGCGCTCGT...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGGGGGACGAGCGCTGTaGGATGCAGCCCCTACTGCT +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNGGRAL*DAAPTA
Trigger: AGCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCC...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAAGAGGAGACGAGGGTGTaGGGGTCTGCCCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQEETRV*GSAPSF
Trigger: GAAGGAGGGGGCAGACCCCCACACCCTCGTCTCCTC...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCAGAGGAGACGAGGGTGTaGGGGTCTGCCCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPEETRV*GSAPSF
Trigger: GAAGGAGGGGGCAGACCCCCACACCCTCGTCTCCTC...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCGAGGAGACGAGGGTGTaGGGGTCTGCCCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLEETRV*GSAPSF
Trigger: GAAGGAGGGGGCAGACCCCCACACCCTCGTCTCCTC...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTTGGAACCGCTCATCATaGGGTTTTCAGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRWNRSS*GFQGCC
Trigger: ACAGCATCCCTGAAAACCCCATGATGAGCGGTTCCA...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCATGGAACCGCTCATCATaGGGTTTTCAGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESWNRSS*GFQGCC
Trigger: ACAGCATCCCTGAAAACCCCATGATGAGCGGTTCCA...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCACTTGTTCCAGGAGCTaGAGGTCAGAAACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCTCSRS*RSETKA
Trigger: CGCCTTCGTTTCTGACCTCCAGCTCCTGGAACAAGT...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTTGTTGGGGCTGCGCTTaGGCTTTCGAGGAGGAATCT +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICCWGCA*AFEEES
Trigger: AGATTCCTCCTCGAAAGCCCAAGCGCAGCCCCAACA...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGCTTTGGGTGAACCTTaGGCGCCTCTGCGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNALGEP*APLRSA
Trigger: GGCCGAGCGCAGAGGCGCCCAAGGTTCACCCAAAGC...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACCTTCACGGGGGAATATaGGATCTTGGGGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADLHGGI*DLGEGA
Trigger: AGCTCCTTCCCCAAGATCCCATATTCCCCCGTGAAG...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCTCCTGGCGTCCGCCCTaGTGGCCTTCACGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLSWRPP*WPSRGN
Trigger: ATTCCCCCGTGAAGGCCACCAGGGCGGACGCCAGGA...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAACCCTGGGCTCAGCGTaGTGCAGGATCTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVTLGSA*CRICCQ
Trigger: CTGGCAGCAGATCCTGCACCACGCTGAGCCCAGGGT...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACTCAGGCCACATCAAATaGTGGTGTCCCAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADSGHIK*WCPRAQ
Trigger: CTGAGCTCTGGGACACCACCATTTGATGTGGCCTGA...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTCAAGACAAGGTGGTCTaGAGCCACTGCTCAGAACTT +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRQDKVV*SHCSEL
Trigger: AAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTG...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGCTCATAGTAGGCTTTaGTTTGCTCACAGCGCATGC +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCAHSRL*FAHSAC
Trigger: GCATGCGCTGTGAGCAAATCAAAGCCTACTATGAGC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCATCCGTGAGGTTGAAGTaGACTTTCGGATTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESSVRLK*TFGFFA
Trigger: TGCGAAGAATCCGAAAGTTCACTTCAACCTCACGGA...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTCGGGAAGATCGTGAATaGTCTCTTCATAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRREDRE*SLHRAL
Trigger: AAGAGCCCTATGAAGAGATCATTCACGATCTTCCCG...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGCTGAGGATGAAACACTaGGGCCGCTGTTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALLRMKH*GRCSRK
Trigger: CTTCCGGGAACAGCGGCCTCAGTGTTTCATCCTCAG...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTCTGGCCAAGAGGTTGTaGAACAAGTCTGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRLAKRL*NKSGFL
Trigger: GAGAAATCCAGACTTGTTTCACAACCTCTTGGCCAG...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATCACTCCTCCCCGAGTTaGAGAGGCTGGCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNHSSPS*RGWRAR
Trigger: ACGAGCTCGCCAGCCTCTTCAACTCGGGGAGGAGTG...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGCACTCCTCCCCGAGTTaGAGAGGCTGGCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLHSSPS*RGWRAR
Trigger: ACGAGCTCGCCAGCCTCTTCAACTCGGGGAGGAGTG...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCACAGCCTCCTCATCCATaGGTAACACCTAAAACATGG +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESQPPHP*VTPKTW
Trigger: CCATGTTTTAGGTGTTACTCATGGATGAGGAGGCTG...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTCACCGGCTATGGATTTaGAGCCATACGTGTTTAACC +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRHRLWI*SHTCLT
Trigger: GGTTAAACACGTATGGCTTCAAATCCATAGCCGGTG...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAGAGCTCGCTGAGCGTTaGCAGGTCATCGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVELAER*QVIVWG
Trigger: GCCCCAAACGATGACCTGGCAACGCTCAGCGAGCTC...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTATCGGGCCTGGCCGCGTaGCCCAGCATCTCGATGTAC +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLSGLAA*PSISMY
Trigger: GTACATCGAGATGCTGGGGCACGCGGCCAGGCCCGA...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACATCGGGCCTGGCCGCGTaGCCCAGCATCTCGATGTAC +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTSGLAA*PSISMY
Trigger: GTACATCGAGATGCTGGGGCACGCGGCCAGGCCCGA...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGTGGCTCTTGGAGTACTaGGGGGACAGCGGGCTCGAC +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLWLLEY*GDSGLD
Trigger: GTCGAGCCCGCTGTCCCCGCAGTACTCCAAGAGCCA...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCACAGTTCACGAGGTGTaGGTTTGCCTGATGCATCAG +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCTVHEV*VCLMHQ
Trigger: CTGATGCATCAGGCAAACCCACACCTCGTGAACTGT...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTGGAACCGCTCATCATaGGGTTTTCAGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCWNRSS*GFQGCC
Trigger: ACAGCATCCCTGAAAACCCCATGATGAGCGGTTCCA...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGATCTGGAATCCAGTGTaGCCCTGCTGGCGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLIWNPV*PCWRQP
Trigger: GGGCTGGCGCCAGCAGGGCCACACTGGATTCCAGAT...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGTGAAGGCTGTACCGTaGTCTTTGAGGGCAACATTC +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCVKAVP*SLRATF
Trigger: GAATGTTGCCCTCAAAGACCACGGTACAGCCTTCAC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCCTCCTGAGCCAAACATaGCCCACTGCCTGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCLLSQT*PTACFC
Trigger: ACAAAAACAGGCAGTGGGCCATGTTTGGCTCAGGAG...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCGGTCCCTCTTTGGCTTaGGCGGGGGCTGTTTCCGTG +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLGPSLA*AGAVSV
Trigger: CACGGAAACAGCCCCCGCCCAAGCCAAAGAGGGACC...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCTGGCGTCCGCCCTGGTaGCCTTCACGGGGGAATATG +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLWRPPW*PSRGNM
Trigger: CATATTCCCCCGTGAAGGCCACCAGGGCGGACGCCA...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACATCCTGGCGTCCGCCCTaGTGGCCTTCACGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTSWRPP*WPSRGN
Trigger: ATTCCCCCGTGAAGGCCACCAGGGCGGACGCCAGGA...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCGGCCACATCAAATGGTaGTGTCCCAGAGCTCAGACG +
Preference number: 4 (lower is better)
Translates to: SHCSELSDSRRKHINEQGGHIKW*CPRAQT
Trigger: CGTCTGAGCTCTGGGACACCACCATTTGATGTGGCC...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCGCTACTCTCTCGCTCTaGCCACGTCCACACTTTTCC +
Preference number: 4 (lower is better)
Translates to: SHCSELSDSRRKHINEQGATLSL*PRPHFS
Trigger: GGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGC...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR CAA 72 bp GAGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTaGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTT +
Preference number: 4 (lower is better)
Translates to: EKPQRMSEGSLL*LQPGISRQFYF
Trigger: AAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTCCGTGAGGTTGAAGTaGACTTTCGGATTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCSVRLK*TFGFFA
Trigger: TGCGAAGAATCCGAAAGTTCACTTCAACCTCACGGA...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCATACTCATTGGTCTCTaGAGCTTCATCTGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCILIGL*SFIWRS
Trigger: ACTGCGCCAGATGAAGCTTCAGAGACCAATGAGTAT...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACATACTCATTGGTCTCTaGAGCTTCATCTGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADILIGL*SFIWRS
Trigger: ACTGCGCCAGATGAAGCTTCAGAGACCAATGAGTAT...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTAGGTGTGGGTTTGCCTaGTGCATCAGGAGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICRCGFA*CIRRSF
Trigger: GAAACTTCTCCTGATGCATCAGGCAAACCCACACCT...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCCGGGAAGATCGTGAATaGTCTCTTCATAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCREDRE*SLHRAL
Trigger: AAGAGCCCTATGAAGAGATCATTCACGATCTTCCCG...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCTCAACAAGTAGAAAATaGGAAAATTGCTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCSTSRK*ENCSGQ
Trigger: TTGGCCAGAGCAATTTTCTCATTTTCTACTTGTTGA...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCCTTCATCCAATAAGGTaGGAAATCCAGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGLHPIR*EIQMAS
Trigger: AGAAGCCATCTGGATTTCTCACCTTATTGGATGAAG...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAGTTTGGCTTTGGGTaGACCTTGGGCGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNEFGFG*TLGASA
Trigger: CGCAGAGGCGCCCAAGGTTCACCCAAAGCCAAACTC...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACCAGCCTCCTCATCCATaGGTAACACCTAAAACATGG +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADQPPHP*VTPKTW
Trigger: CCATGTTTTAGGTGTTACTCATGGATGAGGAGGCTG...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCACGAAAGCACATCAATaGACAAGGCCTTGCATTATG +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGTKAHQ*TRPCIM
Trigger: CATAATGCAAGGCCTTGTTCATTGATGTGCTTTCGT...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGACGCTTCACTAGACGCTaGCGTTGGCCAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRRFTRR*RWPRGR
Trigger: CCTTCCCCTTGGCCAACGGCAGCGTCTAGTGAAGCG...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGCGCTTCACTAGACGCTaGCGTTGGCCAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLRFTRR*RWPRGR
Trigger: CCTTCCCCTTGGCCAACGGCAGCGTCTAGTGAAGCG...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCTCCAACAAACTGTCTTaGTTGGCAATTGGTAACACC +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGSNKLS*LAIGNT
Trigger: GGTGTTACCAATTGCCAAGCAAGACAGTTTGTTGGA...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACGAGCTCGCTGAGCGTTaGCAGGTCATCGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNELAER*QVIVWG
Trigger: GCCCCAAACGATGACCTGGCAACGCTCAGCGAGCTC...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCCCAATATCCAATGTCTaGATGCTTTTCTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCPISNV*MLFCSS
Trigger: AGATGAACAGAAAAGCATGCAGACATTGGATATTGG...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAAGCAGGGGCGGCCGGTaGGGCAGCAGGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTSRGGR*GSRLGK
Trigger: CTTCCCCAACCTGCTGCCGCACCGGCCGCCCCTGCT...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGTCTTGGGGAAGGAGCTaGAGGGCCCGGCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLSWGRS*RARPRG
Trigger: CCCCCGTGGCCGGGCCCTGCAGCTCCTTCCCCAAGA...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGCTGGGCTCAGCGTGGTaGAGGATCTGCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLLGSAW*RICCQS
Trigger: AGACTGGCAGCAGATCCTGCACCACGCTGAGCCCAG...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAAGGCTGGGCTTCTTaGAAGGTGGTGGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNEGWAS*KVVGEA
Trigger: TGCCTCCCCCACCACCTTGCAAGAAGCCCAGCCTTC...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCACGTGTTTAACCGTGTaGCATGTGATTTCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: FLRYSLALATSTLFPASLTCLTV*HVISCD
Trigger: ATCACAGGAAATCACATGGCACACGGTTAAACACGT...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGACTCTAGCAAGCACTaGTCGATTTCCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCDSSKH*SISISW
Trigger: CCATGAGATGGAAATCGACCAGTGCTTGCTAGAGTC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAACTAGACGCTGCCGTTaGCCAAGGGGAAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVTRRCR*PRGRDS
Trigger: AGAGTCCCTTCCCCTTGGCCAACGGCAGCGTCTAGT...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACTACCGAGCACACAGATaGAGCAGGGACCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNYRAHR*SRDPPE
Trigger: CTCGGGAGGGTCCCTGCTCCATCTGTGTGCTCGGTA...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATTACCGAGCACACAGATaGAGCAGGGACCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNYRAHR*SRDPPE
Trigger: CTCGGGAGGGTCCCTGCTCCATCTGTGTGCTCGGTA...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACAGTTCACGAGGTGTaGGTTTGCCTGATGCATCAG +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICTVHEV*VCLMHQ
Trigger: CTGATGCATCAGGCAAACCCACACCTCGTGAACTGT...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCACTTGTTCCAGGAGCTaGAGGTCAGAAACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SHCSELSDSRRKHINEQGTCSRS*RSETKA
Trigger: CGCCTTCGTTTCTGACCTCCAGCTCCTGGAACAAGT...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCCATTCCACTTGCTCGTaGAGAAAAAGCACTTCATTG +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGHSTCS*RKSTSL
Trigger: CAATGAAGTGCTTTTTCTCCACGAGCAAGTGGAATG...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAGGGCCAACGAGGCACTaGCCCAGGCCATCCACGGCC +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTGPTRH*PRPSTA
Trigger: GGCCGTGGATGGCCTGGGCCAGTGCCTCGTTGGCCC...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGCGAAGGAGACCAGATaGACGGGCCAACGAGGCACT +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNAKETR*TGQRGT
Trigger: AGTGCCTCGTTGGCCCGTCCATCTGGTCTCCTTCGC...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGGTTGGGGTCCCTCTTTaGCTTGGGCGGGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLVGVPL*LGRGLF
Trigger: AAACAGCCCCCGCCCAAGCCAAAGAGGGACCCCAAC...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAGGGCCAGAGCTTCGTTaGCCGCTTCCCTGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTGPELR*PLPWPR
Trigger: CCGCGGCCAGGGAAGCGGCCAACGAAGCTCTGGCCC...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGCCGGGCTATCGGGCCTaGCCGCGTGCCCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLPGYRA*PRAPAS
Trigger: AGATGCTGGGGCACGCGGCCAGGCCCGATAGCCCGG...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTACGCCCTTCTGGCTCTTaGAGTACTGCGGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLRPSGS*STAGTA
Trigger: CGCTGTCCCCGCAGTACTCCAAGAGCCAGAAGGGCG...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACGGATGCACTATTGCATaGAGGCTCTGTTCCATGATC +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADGCTIA*RLCSMI
Trigger: GATCATGGAACAGAGCCTCCATGCAATAGTGCATCC...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGATCATCTACTATGTTaGGGTCTCCACCATGTTCCA +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCDHLLC*GLHHVP
Trigger: TGGAACATGGTGGAGACCTCAACATAGTAGATGATC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCAGGTGTGGGTTTGCCTaGTGCATCAGGAGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: SHCSELSDSRRKHINEQGRCGFA*CIRRSF
Trigger: GAAACTTCTCCTGATGCATCAGGCAAACCCACACCT...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGGGAACACAGCTTCCCTaGGGAGCTGAAATACAGCTG +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALGTQLP*GAEIQL
Trigger: CAGCTGTATTTCAGCTCCTCAGGGAAGCTGTGTTCC...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGTCCCGGAAGAGCTGGTaGAAGGCTCTCTCCACACAG +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLSRKSW*KALSTQ
Trigger: CTGTGTGGAGAGAGCCTTTCACCAGCTCTTCCGGGA...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTCTGGCCAAGAGGTTGTaGAACAAGTCTGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICLAKRL*NKSGFL
Trigger: GAGAAATCCAGACTTGTTTCACAACCTCTTGGCCAG...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCTGTGGAGTGCACTTCTaGAGTTTTCCAATAATATCC +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGCGVHF*SFPIIS
Trigger: GGATATTATTGGAAAACTTCAGAAGTGCACTCCACA...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACTCCTGTGATCTATGCTaGAGTCGGGAGGTGAAATTT +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADSCDLC*SREVKF
Trigger: AAATTTCACCTCCCGACTTCAGCATAGATCACAGGA...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTCCATGTGATTTCCTGTaGTCTATGCTGAAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICPCDFL*SMLKSG
Trigger: TCCCGACTTCAGCATAGATCACAGGAAATCACATGG...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTACGAAAGCACATCAATaGACAAGGCCTTGCATTATG +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRTKAHQ*TRPCIM
Trigger: CATAATGCAAGGCCTTGTTCATTGATGTGCTTTCGT...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACCAGGCACAGGCAATGTaGATGGGCGTCCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYQAQAM*MGVQKS
Trigger: AGACTTCTGGACGCCCATGCACATTGCCTGTGCCTG...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCCGAATGTCTCCAAGGTaGAATATTGCTGCTAGAATT +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGRMSPR*NIAARI
Trigger: AATTCTAGCAGCAATATTGCACCTTGGAGACATTCG...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTTGTCATCGGTTCTTTTaGTTCCTTCCTCTTGCATGT +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRCHRFF*FLPLAC
Trigger: ACATGCAAGAGGAAGGAAGCAAAAGAACCGATGACA...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGTGGTGCAGGATCTGCTaGCAGTCTTGTCCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALWCRIC*QSCPSS
Trigger: TGAGGAAGGACAAGACTGGCAGCAGATCCTGCACCA...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAGCAGCCTTCTGTTGTTaGAGCCCGGAATCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVAAFCC*SPESVG
Trigger: GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGC...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTATCCCAGCCTCTCTCTTaGTACCTAGGGGTAGCACAG +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVSQPLS*YLGVAQ
Trigger: CTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGA...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAAACTAGACGCTGCCGTTaGCCAAGGGGAAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQTRRCR*PRGRDS
Trigger: AGAGTCCCTTCCCCTTGGCCAACGGCAGCGTCTAGT...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACATACCGAGCACACAGATaGAGCAGGGACCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTYRAHR*SRDPPE
Trigger: CTCGGGAGGGTCCCTGCTCCATCTGTGTGCTCGGTA...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACCTGCTCGGGTTTGGTaGAACCGCTCATCATGGGGT +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQPARVW*NRSSWG
Trigger: ACCCCATGATGAGCGGTTCCACCAAACCCGAGCAGG...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTACAGCTGGGACACCATaGAAGAATAAATTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRTAGTP*KNKLEA
Trigger: AGCTTCCAATTTATTCTTCCATGGTGTCCCAGCTGT...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTCATCCTGTATGGTCTaGTTCAAATACCGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCSSCMV*FKYRCA
Trigger: TGCACACCGGTATTTGAACCAGACCATACAGGATGA...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGGAGAACGCTCCCCTGTaGATGCATCATCCTGTATGG +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALENAPL*MHHPVW
Trigger: CCATACAGGATGATGCATCCACAGGGGAGCGTTCTC...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCTCCAAAACTCCATTCTaGTTACCAGGAGAATATGCT +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGSKTPF*LPGEYA
Trigger: AGCATATTCTCCTGGTAACCAGAATGGAGTTTTGGA...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTGAGGAATCTTCTTCATaGTGCTGTAGTCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICEESSS*CCSRRC
Trigger: ACAGCGACGACTACAGCACCATGAAGAAGATTCCTC...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCCTTCATCCAATAAGGTaGGAAATCCAGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCLHPIR*EIQMAS
Trigger: AGAAGCCATCTGGATTTCTCACCTTATTGGATGAAG...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATCAGGCACAGGCAATGTaGATGGGCGTCCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNQAQAM*MGVQKS
Trigger: AGACTTCTGGACGCCCATGCACATTGCCTGTGCCTG...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACCTGGCCATATTTGGCTaGCAAGTGGAGGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNLAIFG*QVEGSP
Trigger: TGGACTCCCCTCCACTTGGCAGCCAAATATGGCCAG...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACGGCATTAGCTTGACCTaGTCGGGTTTGGTGGAACCG +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNGISLT*SGLVEP
Trigger: CGGTTCCACCAAACCCGAGCAGGTCAAGCTAATGCC...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAATGCTGAACACCGAGTaGAGCGAAGGAGACCAGATG +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVMLNTE*SEGDQM
Trigger: CATCTGGTCTCCTTCGCTGCACTCGGTGTTCAGCAT...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACACAGACGGCAGCCTGTTaGAGGAGGCCCCTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTQTAAC*RRPLPA
Trigger: AGCCGGAAGGGGCCTCCTGCAACAGGCTGCCGTCTG...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCAGTGGTCTGGAGCCACTaGTCAGAACTTTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPVVWSH*SELSDS
Trigger: GCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCAC...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTCAGACAGGAATCTTaGTACGGGTTCCAGCATTCT +
Preference number: 4 (lower is better)
Translates to: SHCSELSDSRRKHINEQGLRQES*YGFQHS
Trigger: AGAATGCTGGAACCCGTAGCAAGATTCCTGTCTGAG...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCTCGATTTCCATCTCATaGGATCGAAAAACGTTACAT +
Preference number: 4 (lower is better)
Translates to: PSACQKAAFCCCSPESVGSISIS*DRKTLH
Trigger: ATGTAACGTTTTTCGATCCCATGAGATGGAAATCGA...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAACTAGACGCTGCCGTTaGCCAAGGGGAAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLTRRCR*PRGRDS
Trigger: AGAGTCCCTTCCCCTTGGCCAACGGCAGCGTCTAGT...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACACTTCTTTGTCATTGTaGTGGATAATCGCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADTSLSL*WIIASC
Trigger: ACAGGACGCGATTATCCACCACAATGACAAAGAAGT...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACAAACTGTCTTGCTTaGCAATTGGTAACACCAGGG +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICTNCLA*QLVTPG
Trigger: CCCTGGTGTTACCAATTGCCAAGCAAGACAGTTTGT...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTTCATCCTGTATGGTCTaGTTCAAATACCGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICSSCMV*FKYRCA
Trigger: TGCACACCGGTATTTGAACCAGACCATACAGGATGA...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACATGCATCATCCTGTATaGTCTGGTTCAAATACCGGT +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADMHHPV*SGSNTG
Trigger: ACCGGTATTTGAACCAGACCATACAGGATGATGCAT...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACGAGAACGCTCCCCTGTaGATGCATCATCCTGTATGG +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYENAPL*MHHPVW
Trigger: CCATACAGGATGATGCATCCACAGGGGAGCGTTCTC...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCCATTCCACTTGCTCGTaGAGAAAAAGCACTTCATTG +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCHSTCS*RKSTSL
Trigger: CAATGAAGTGCTTTTTCTCCACGAGCAAGTGGAATG...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGCATTCCCATCCTTCATaGGGGAGTACACCGCATTTG +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALHSHPS*GSTPHL
Trigger: CAAATGCGGTGTACTCCCCCATGAAGGATGGGAATG...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCATGGGGTGGAAATGCCTaGGTCCACTCTTGTCATCGG +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPWGGNA*VHSCHR
Trigger: CCGATGACAAGAGTGGACCCAGGCATTTCCACCCCA...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAGACATGGAGCTGGGGTaGAAATGCCTGGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLDMELG*KCLGPL
Trigger: GAGTGGACCCAGGCATTTCCACCCCAGCTCCATGTC...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATAGACTGACATGGAGCTaGGGTGGAAATGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNRLTWS*GGNAWV
Trigger: GACCCAGGCATTTCCACCCCAGCTCCATGTCAGTCT...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGCGGGGGCTGTTTCCGTaGAGACGGGAGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVRGLFP*RREAAA
Trigger: AGCAGCAGCCTCCCGTCTCCACGGAAACAGCCCCCG...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR CAA 72 bp AACCGTAGAAAAACAACTGTACAGAGTGTGCATGGATaGCTCCTTTCCTCCGCTACTCTCTCGCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NRRKTTVQSVHG*LLSSATLSLWP
Trigger: TGGCCAGAGCGAGAGAGTAGCGGAGGAAAGGAGCAATCCATGCACACTCTGTACAGTTGTTTTTCTACGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAACCACAATGTGGATaGGAGGCTCCAACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQQPQCG*EAPTRR
Trigger: CCTTCTGGTTGGAGCCTCTCATCCACATTGTGGTTG...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCCAACCACAATGTGGATaGGAGGCTCCAACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLQPQCG*EAPTRR
Trigger: CCTTCTGGTTGGAGCCTCTCATCCACATTGTGGTTG...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356711.7
CDS-3UTR TCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCAAACCCTTCCTGCTTCTaGAAAGCCTTCTCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPNPSCF*KAFSRS
Trigger: TGAGCGCGAGAAGGCTTTTCAGAAGCAGGAAGGGTT...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGAACCCTTCCTGCTTCTaGAAAGCCTTCTCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLNPSCF*KAFSRS
Trigger: TGAGCGCGAGAAGGCTTTTCAGAAGCAGGAAGGGTT...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAGGTGTGGGTTTGCCTaGTGCATCAGGAGAAGTTTC +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYRCGFA*CIRRSF
Trigger: GAAACTTCTCCTGATGCATCAGGCAAACCCACACCT...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGGGCTTCAGACTTTCCTaGTCCCCTTTCTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLGFRLS*SPFSTE
Trigger: CTCAGTGGAGAAAGGGGATCAGGAAAGTCTGAAGCC...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCATCAACAAGTAGAAAATaGGAAAATTGCTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESSTSRK*ENCSGQ
Trigger: TTGGCCAGAGCAATTTTCTCATTTTCTACTTGTTGA...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACCTGTACCGTGGTCTTTaGGGGCAACATTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNLYRGL*GQHSHS
Trigger: GGAATGGGAATGTTGCCCTCAAAGACCACGGTACAG...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGATGTCTCCAAGCTCCCTaGCTGTACCTGGTTAGTGGT +
Preference number: 4 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRCLQAP*LYLVSG
Trigger: ACCACTAACCAGGTACAGTCAGGGAGCTTGGAGACA...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAATGCTGTGTGTCTCTATaGGCTGTCTCCAAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQCCVSL*AVSKLP
Trigger: AGGGAGCTTGGAGACAGCTCATAGAGACACACAGCA...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCCTGATGCTTATTCTCTaGAGCAGGTGCTGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLLMLIL*SRCWRA
Trigger: AGCACGCCAGCACCTGCTTCAGAGAATAAGCATCAG...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACCACGAGGTGTGGGTTTaGCTGATGCATCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNHEVWV*LMHQEK
Trigger: CTTCTCCTGATGCATCAGGCAAACCCACACCTCGTG...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCTGGGGTTTTCAGGGATaGTGTCCTGAGACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLWGFQG*CPETAA
Trigger: AGCAGCAGTCTCAGGACAGCATCCCTGAAAACCCCA...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACAGGCATTAGCTTGACCTaGTCGGGTTTGGTGGAACCG +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTGISLT*SGLVEP
Trigger: CGGTTCCACCAAACCCGAGCAGGTCAAGCTAATGCC...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTTATCCAATGTCTGCATaGTTTTCTGTTCATCTTGAC +
Preference number: 4 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRYPMSA*FSVHLD
Trigger: GTCAAGATGAACAGAAAAGCATGCAGACATTGGATA...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCATATCCAATGTCTGCATaGTTTTCTGTTCATCTTGAC +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESYPMSA*FSVHLD
Trigger: GTCAAGATGAACAGAAAAGCATGCAGACATTGGATA...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTATACATTACCCTTCCTaGGTAGTGCATGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICIHYPS*VVHDGE
Trigger: TTCACCATCATGCACTACGCAGGAAGGGTAATGTAT...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACCCTTGTAATTTACACTaGTGGAGAACAAGTCGACAT +
Preference number: 4 (lower is better)
Translates to: SSKTRWSGATAQNFPTADPCNLH*WRTSRH
Trigger: ATGTCGACTTGTTCTCCAGCAGTGTAAATTACAAGG...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAATGTCCTCTGTGTTCTaGAGAAAGCTATTGATAGAA +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESMSSVF*RKLLIE
Trigger: TTCTATCAATAGCTTTCTGCAGAACACAGAGGACAT...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGATGCTGAACACCGAGTaGAGCGAAGGAGACCAGATG +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLMLNTE*SEGDQM
Trigger: CATCTGGTCTCCTTCGCTGCACTCGGTGTTCAGCAT...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACACTCGACCCCTCCGGCTaGACGGGGTACTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTLDPSG*TGYLRL
Trigger: CAACCTCAAGTACCCCGTGCAGCCGGAGGGGTCGAG...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACTCCCAGCCTCTCTCTTaGTACCTAGGGGTAGCACAG +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHSQPLS*YLGVAQ
Trigger: CTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGA...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGACAGTGAGGGAATCATaGAGTGTAAGTCCCGGGGGA +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLTVRES*SVSPGG
Trigger: TCCCCCGGGACTTACACTGCATGATTCCCTCACTGT...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGCTCAGGATGCACTATTaGATGGAGGCTCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALLRMHY*MEALFH
Trigger: ATGGAACAGAGCCTCCATGCAATAGTGCATCCTGAG...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS-3UTR CCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTACACAGGCAATGTGCATaGGCGTCCAGAAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVHRQCA*ASRSLH
Trigger: ATGAAGACTTCTGGACGCCCATGCACATTGCCTGTG...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCTTCACCAGATTTGTCTaGCCATATTTGGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SHCSELSDSRRKHINEQGFTRFV*PYLAAK
Trigger: CTTGGCAGCCAAATATGGCCAGACAAATCTGGTGAA...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGGAGAACGCTCCCCTGTaGATGCATCATCCTGTATGG +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLENAPL*MHHPVW
Trigger: CCATACAGGATGATGCATCCACAGGGGAGCGTTCTC...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACGACTGTACAGGGACTTaGCCAAGAGGTCTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYDCTGT*PRGLGK
Trigger: TTTTCCGAGACCTCTTGGCCAAGTCCCTGTACAGTC...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTCATTCCACTTGCTCGTaGAGAAAAAGCACTTCATTG +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICHSTCS*RKSTSL
Trigger: CAATGAAGTGCTTTTTCTCCACGAGCAAGTGGAATG...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTCCAAAACTCCATTCTaGTTACCAGGAGAATATGCT +
Preference number: 4 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCSKTPF*LPGEYA
Trigger: AGCATATTCTCCTGGTAACCAGAATGGAGTTTTGGA...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACCTCCCTGACTGTACCTaGTTAGTGGTCTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYLPDCT*LVVSET
Trigger: AGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAG...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTATGGGGTGGAAATGCCTaGGTCCACTCTTGTCATCGG +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLWGGNA*VHSCHR
Trigger: CCGATGACAAGAGTGGACCCAGGCATTTCCACCCCA...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGCGCCCTTCTGGCTCTTaGAGTACTGCGGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVRPSGS*STAGTA
Trigger: CGCTGTCCCCGCAGTACTCCAAGAGCCAGAAGGGCG...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGTCGCCGTCGCCCTTCTaGCTCTTGGAGTACTGCGGG +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVSPSPF*LLEYCG
Trigger: CCCGCAGTACTCCAAGAGCCAGAAGGGCGACGGCGA...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACATGGCGTCCGCCCTGGTaGCCTTCACGGGGGAATATG +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTWRPPW*PSRGNM
Trigger: CATATTCCCCCGTGAAGGCCACCAGGGCGGACGCCA...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCGCTTCTTCAGAAGGCTaGGCTTCTTGCAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLASSEG*ASCKVV
Trigger: CACCACCTTGCAAGAAGCCCAGCCTTCTGAAGAAGC...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGACTTCATCTGGCGCAGTaGGGTCAAATCCACTCCATT +
Preference number: 4 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRLHLAQ*GQIHSI
Trigger: AATGGAGTGGATTTGACCTCACTGCGCCAGATGAAG...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAATACTCATTGGTCTCTaGAGCTTCATCTGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVILIGL*SFIWRS
Trigger: ACTGCGCCAGATGAAGCTTCAGAGACCAATGAGTAT...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTATGCACACGACATGTTTaGATCTGGAATCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVCTRHV*IWNPVW
Trigger: CCACACTGGATTCCAGATTCAAACATGTCGTGTGCA...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACTGTACCGTGGTCTTTaGGGGCAACATTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTLYRGL*GQHSHS
Trigger: GGAATGGGAATGTTGCCCTCAAAGACCACGGTACAG...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATTTGGGCCTGATGCAATaGATGAAGTGTGGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNLGLMQ*MKCGVH
Trigger: GTGCACTCCACACTTCATTCATTGCATCAGGCCCAA...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACTGATGCTTATTCTCTaGAGCAGGTGCTGGCGTGCT +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTLMLIL*SRCWRA
Trigger: AGCACGCCAGCACCTGCTTCAGAGAATAAGCATCAG...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGCTGTCCCTGTGTCTTTaGAATGTCGAAGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLLSLCL*NVEVPV
Trigger: CACAGGGACTTCGACATTTCAAAGACACAGGGACAG...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAGGAGGCTCTGTTCCATaGTCCTGCAAAAAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVGGSVP*SCKKLQ
Trigger: TTGAAGCTTTTTGCAGGATCATGGAACAGAGCCTCC...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS-3UTR GCA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAACACAGACCTTTTGTTaGATCTTTGAACATAATGTC +
Preference number: 4 (lower is better)
Translates to: RSPSACQKAAFCCCSPESTQTFC*IFEHNV
Trigger: GACATTATGTTCAAAGATGCAACAAAAGGTCTGTGT...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACACGCTCCCCTGTGGATaGATCATCCTGTATGGTCTG +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHTLPCG*IILYGL
Trigger: CAGACCATACAGGATGATGCATCCACAGGGGAGCGT...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGGAAGGCTGGGCTTCTTaGAAGGTGGTGGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVEGWAS*KVVGEA
Trigger: TGCCTCCCCCACCACCTTGCAAGAAGCCCAGCCTTC...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGAGAGTGTGCATGGATTaGTCCTTTCCTCCGCTACTC +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLRVCMD*SFPPLL
Trigger: GAGTAGCGGAGGAAAGGAGCAATCCATGCACACTCT...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAACAGTGAGGGAATCATaGAGTGTAAGTCCCGGGGGA +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLTVRES*SVSPGG
Trigger: TCCCCCGGGACTTACACTGCATGATTCCCTCACTGT...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAAGTCTTCATCCTGGTaGTTGACGTTGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVKSSSW*LTLTPL
Trigger: CAGAGGAGTCAACGTCAACCACCAGGATGAAGACTT...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACACAGGCAATGTGCATaGGCGTCCAGAAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQHRQCA*ASRSLH
Trigger: ATGAAGACTTCTGGACGCCCATGCACATTGCCTGTG...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGACAGTTCACGAGGTGTaGGTTTGCCTGATGCATCAG +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLTVHEV*VCLMHQ
Trigger: CTGATGCATCAGGCAAACCCACACCTCGTGAACTGT...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTATGAGAAAATTGCTCTaGCCAAGAGGTTGTGAAACA +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICMRKLL*PRGCET
Trigger: TGTTTCACAACCTCTTGGCCAGAGCAATTTTCTCAT...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGGACTGTACAGGGACTTaGCCAAGAGGTCTCGGAAAA +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLDCTGT*PRGLGK
Trigger: TTTTCCGAGACCTCTTGGCCAAGTCCCTGTACAGTC...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGACATTCCCATCCTTCATaGGGGAGTACACCGCATTTG +
Preference number: 4 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRHSHPS*GSTPHL
Trigger: CAAATGCGGTGTACTCCCCCATGAAGGATGGGAATG...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGGTGAAGGCTGTACCGTaGTCTTTGAGGGCAACATTC +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLVKAVP*SLRATF
Trigger: GAATGTTGCCCTCAAAGACCACGGTACAGCCTTCAC...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAAGTAGCAAGACAAGGTaGTCTGGAGCCACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLSSKTR*SGATAQ
Trigger: CTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGTCCGTGAGGTTGAAGTaGACTTTCGGATTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLSVRLK*TFGFFA
Trigger: TGCGAAGAATCCGAAAGTTCACTTCAACCTCACGGA...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTACTTCATCTGGCGCAGTaGGGTCAAATCCACTCCATT +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLLHLAQ*GQIHSI
Trigger: AATGGAGTGGATTTGACCTCACTGCGCCAGATGAAG...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGCGGGAAGATCGTGAATaGTCTCTTCATAGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLREDRE*SLHRAL
Trigger: AAGAGCCCTATGAAGAGATCATTCACGATCTTCCCG...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGCTGAGGATGAAACACTaGGGCCGCTGTTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVLRMKH*GRCSRK
Trigger: CTTCCGGGAACAGCGGCCTCAGTGTTTCATCCTCAG...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAATGCACACGACATGTTTaGATCTGGAATCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQCTRHV*IWNPVW
Trigger: CCACACTGGATTCCAGATTCAAACATGTCGTGTGCA...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACTGGCCAAGAGGTTGTaGAACAAGTCTGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQLAKRL*NKSGFL
Trigger: GAGAAATCCAGACTTGTTTCACAACCTCTTGGCCAG...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGCTTCATCCAATAAGGTaGGAAATCCAGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALLHPIR*EIQMAS
Trigger: AGAAGCCATCTGGATTTCTCACCTTATTGGATGAAG...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACAGTTGTGATGCTATGGTaGCTGGATCTCCTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTVVMLW*LDLLVP
Trigger: TGGAACGAGGAGATCCAGTCACCATAGCATCACAAC...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGAGTATCTGGCAGCTTTaGGTTATTGGGCCTGATGCA +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLSIWQL*VIGPDA
Trigger: TGCATCAGGCCCAATAACTCAAAGCTGCCAGATACT...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGGTAGGCACAAATCATTaGGTTGGTCAGCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLVGTNH*VGQHAS
Trigger: ACTGGCATGCTGACCAACTCAATGATTTGTGCCTAC...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTATTCCCGGGCAATGTCTaGAGCATTCTGAATGACCAG +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLFPGNV*SILNDQ
Trigger: CTGGTCATTCAGAATGCTTCAGACATTGCCCGGGAA...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGGCTGCACGGGGTACTTaGGGTTGGTCTCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQAARGT*GWSPGL
Trigger: CAGTCCTGGAGACCAACCTCAAGTACCCCGTGCAGC...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGACTTATAGACAACCGTaGGTATCCATCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALTYRQP*VSIFFR
Trigger: CCTGAAGAAGATGGATACTCACGGTTGTCTATAAGT...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGCCATGTGATTTCCTGTaGTCTATGCTGAAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLPCDFL*SMLKSG
Trigger: TCCCGACTTCAGCATAGATCACAGGAAATCACATGG...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCACACCGGCTATGGATTTaGAGCCATACGTGTTTAACC +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPHRLWI*SHTCLT
Trigger: GGTTAAACACGTATGGCTTCAAATCCATAGCCGGTG...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCGCATTATGGGAGGGTTaGGGATATACAGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLALWEG*GYTVRE
Trigger: TTCCCTCACTGTATATCCTCAACCCTCCCATAATGC...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGCGCTTCACTAGACGCTaGCGTTGGCCAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQRFTRR*RWPRGR
Trigger: CCTTCCCCTTGGCCAACGGCAGCGTCTAGTGAAGCG...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTATTCGGATTCTTCGCATaGTTCAGCCTTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVFGFFA*FSLFRN
Trigger: GTTCCTGAAAAGGCTGAAGCATGCGAAGAATCCGAA...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGGAGCTCGCTGAGCGTTaGCAGGTCATCGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQELAER*QVIVWG
Trigger: GCCCCAAACGATGACCTGGCAACGCTCAGCGAGCTC...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGTGTACACATTCCACTTaGTCGTGGAGAAAAAGCACT +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALCTHST*SWRKST
Trigger: AGTGCTTTTTCTCCACGAGCAAGTGGAATGTGTACA...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGATACATTACCCTTCCTaGGTAGTGCATGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALIHYPS*VVHDGE
Trigger: TTCACCATCATGCACTACGCAGGAAGGGTAATGTAT...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACGCAGAGGTGAGTAACTaGAACAAGGATCTTATGGTG +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYAEVSN*NKDLMV
Trigger: CACCATAAGATCCTTGTTGCAGTTACTCACCTCTGC...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTTTGAGTTGGTCAGCATaGCAGTATTTTAGAAACACT +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICLSWSA*QYFRNT
Trigger: AGTGTTTCTAAAATACTGGCATGCTGACCAACTCAA...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTATGTCCTCTGTGTTCTaGAGAAAGCTATTGATAGAA +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICMSSVF*RKLLIE
Trigger: TTCTATCAATAGCTTTCTGCAGAACACAGAGGACAT...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAAGTCTTCATCCTGGTaGTTGACGTTGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNKSSSW*LTLTPL
Trigger: CAGAGGAGTCAACGTCAACCACCAGGATGAAGACTT...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGAAGTCTTCATCCTaGTGGTTGACGTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQQKSSS*WLTLTP
Trigger: AGGAGTCAACGTCAACCACCAGGATGAAGACTTCTG...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACCACAGGCAATGTGCATaGGCGTCCAGAAGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHHRQCA*ASRSLH
Trigger: ATGAAGACTTCTGGACGCCCATGCACATTGCCTGTG...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACCCTGGAGAAGGACATTaGCTCCAGCTAATACAAGAA +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYPGEGH*LQLIQE
Trigger: TTCTTGTATTAGCTGGAGCCAATGTCCTTCTCCAGG...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACTTTCCATTCACATCCTaGAGAAGGACATTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYFPFTS*RRTLAP
Trigger: TGGAGCCAATGTCCTTCTCCAGGATGTGAATGGAAA...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTATTCACCAGATTTGTCTaGCCATATTTGGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVFTRFV*PYLAAK
Trigger: CTTGGCAGCCAAATATGGCCAGACAAATCTGGTGAA...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAACAAACTGTCTTGCTTaGCAATTGGTAACACCAGGG +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVTNCLA*QLVTPG
Trigger: CCCTGGTGTTACCAATTGCCAAGCAAGACAGTTTGT...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGCCTGCTCGGGTTTGGTaGAACCGCTCATCATGGGGT +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVPARVW*NRSSWG
Trigger: ACCCCATGATGAGCGGTTCCACCAAACCCGAGCAGG...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCATGAGAAAATTGCTCTaGCCAAGAGGTTGTGAAACA +
Preference number: 4 (lower is better)
Translates to: SHCSELSDSRRKHINEQGMRKLL*PRGCET
Trigger: TGTTTCACAACCTCTTGGCCAGAGCAATTTTCTCAT...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACCATTCCCATCCTTCATaGGGGAGTACACCGCATTTG +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHHSHPS*GSTPHL
Trigger: CAAATGCGGTGTACTCCCCCATGAAGGATGGGAATG...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAGTGAAGGCTGTACCGTaGTCTTTGAGGGCAACATTC +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLVKAVP*SLRATF
Trigger: GAATGTTGCCCTCAAAGACCACGGTACAGCCTTCAC...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGCACGGGGGCAGAGTTTaGCTTTGGGTGAACCTTGGG +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLHGGRV*LWVNLG
Trigger: CCCAAGGTTCACCCAAAGCCAAACTCTGCCCCCGTG...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGGGGAATATGGGATCTTaGGGAAGGAGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVGNMGS*GRSCRA
Trigger: GGCCCTGCAGCTCCTTCCCCAAGATCCCATATTCCC...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAGATGGATTACCTGAGTaGTGTGACTGTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLDGLPE*CDCPCV
Trigger: GACACAGGGACAGTCACACCACTCAGGTAATCCATC...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGTTTTGTCTAAATGCGTaGAGAGAAGCCCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLFCLNA*REAPAH
Trigger: ATGCGCTGGGGCTTCTCTCCACGCATTTAGACAAAA...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR CAA 72 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTaGTGTACATTCTACAACAGACCTCACCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLC*CTFYNRPHHLP
Trigger: AGGAAGATGGTGAGGTCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACTGCACACGACATGTTTaGATCTGGAATCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHCTRHV*IWNPVW
Trigger: CCACACTGGATTCCAGATTCAAACATGTCGTGTGCA...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACGCTTTTATGATAGAGTaGGTGAGCAATCATGGCTCC +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNAFMIE*VSNHGS
Trigger: GGAGCCATGATTGCTCACTCACTCTATCATAAAAGC...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGGAGGGATCCTGTTTGTaGCAATTTCGACTGGAACAA +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLEGSCL*QFRLEQ
Trigger: TTGTTCCAGTCGAAATTGTCACAAACAGGATCCCTC...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCACTGTCATTTTCTTACTaGGCAGGGCAGACTTATGTC +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPLSFSY*AGQTYV
Trigger: GACATAAGTCTGCCCTGCTCAGTAAGAAAATGACAG...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCGCTGAAGTCGGGAGGTaGAATTTAACTAAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLAEVGR*NLTKGY
Trigger: GTACCCTTTAGTTAAATTTCACCTCCCGACTTCAGC...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGATTCGGATTCTTCGCATaGTTCAGCCTTTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRFGFFA*FSLFRN
Trigger: GTTCCTGAAAAGGCTGAAGCATGCGAAGAATCCGAA...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGCAGGCACAGGCAATGTaGATGGGCGTCCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLQAQAM*MGVQKS
Trigger: AGACTTCTGGACGCCCATGCACATTGCCTGTGCCTG...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGCTGGCCATATTTGGCTaGCAAGTGGAGGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLLAIFG*QVEGSP
Trigger: TGGACTCCCCTCCACTTGGCAGCCAAATATGGCCAG...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACTGTACACATTCCACTTaGTCGTGGAGAAAAAGCACT +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYCTHST*SWRKST
Trigger: AGTGCTTTTTCTCCACGAGCAAGTGGAATGTGTACA...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACATACATTACCCTTCCTaGGTAGTGCATGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYIHYPS*VVHDGE
Trigger: TTCACCATCATGCACTACGCAGGAAGGGTAATGTAT...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACTCAGAGACTCAGCTCTaGTTGTGTACATTCTACAAC +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYSETQL*LCTFYN
Trigger: GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGA...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATCAACTGTACAGAGTGTaGATGGATTGCTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNQLYRV*MDCSFP
Trigger: AGGAAAGGAGCAATCCATGCACACTCTGTACAGTTG...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACCAGTACATGGCAGCGTaGTCATTTGTACTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHQYMAA*SFVLCR
Trigger: CCTACACAGTACAAATGAGCACGCTGCCATGTACTG...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACAGTTTACCTCAGGATaGACTATTGCATGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTQFTSG*TIAWRL
Trigger: GAGCCTCCATGCAATAGTGCATCCTGAGGTAAACTG...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS-3UTR CCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACAGACTCTAGCAAGCACTaGTCGATTTCCATCTCATGG +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTDSSKH*SISISW
Trigger: CCATGAGATGGAAATCGACCAGTGCTTGCTAGAGTC...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGATCTTTGTCATTGTGGTaGATAATCGCGTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRSLSLW*IIASCS
Trigger: GCTACAGGACGCGATTATCCACCACAATGACAAAGA...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCATCTTTGTCATTGTGGTaGATAATCGCGTCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPSLSLW*IIASCS
Trigger: GCTACAGGACGCGATTATCCACCACAATGACAAAGA...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACACTTCTTTGTCATTGTaGTGGATAATCGCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYTSLSL*WIIASC
Trigger: ACAGGACGCGATTATCCACCACAATGACAAAGAAGT...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAACTTCTTTGTCATTGTaGTGGATAATCGCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVTSLSL*WIIASC
Trigger: ACAGGACGCGATTATCCACCACAATGACAAAGAAGT...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACAAAGTCTTCATCCTGGTaGTTGACGTTGACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTKSSSW*LTLTPL
Trigger: CAGAGGAGTCAACGTCAACCACCAGGATGAAGACTT...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTACAGAAGTCTTCATCCTaGTGGTTGACGTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLQKSSS*WLTLTP
Trigger: AGGAGTCAACGTCAACCACCAGGATGAAGACTTCTG...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCACCTGGAGAAGGACATTaGCTCCAGCTAATACAAGAA +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPPGEGH*LQLIQE
Trigger: TTCTTGTATTAGCTGGAGCCAATGTCCTTCTCCAGG...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCATTTCCATTCACATCCTaGAGAAGGACATTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPFPFTS*RRTLAP
Trigger: TGGAGCCAATGTCCTTCTCCAGGATGTGAATGGAAA...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGATTCACCAGATTTGTCTaGCCATATTTGGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRFTRFV*PYLAAK
Trigger: CTTGGCAGCCAAATATGGCCAGACAAATCTGGTGAA...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAAACAAACTGTCTTGCTTaGCAATTGGTAACACCAGGG +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQTNCLA*QLVTPG
Trigger: CCCTGGTGTTACCAATTGCCAAGCAAGACAGTTTGT...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTGTTGTGAAACAAGTCTaGATTTCTCTAGCAAATATG +
Preference number: 4 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICVVKQV*ISLANM
Trigger: CATATTTGCTAGAGAAATCCAGACTTGTTTCACAAC...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAATGCATCATCCTGTATaGTCTGGTTCAAATACCGGT +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVMHHPV*SGSNTG
Trigger: ACCGGTATTTGAACCAGACCATACAGGATGATGCAT...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGAGACTGACATGGAGCTaGGGTGGAAATGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVRLTWS*GGNAWV
Trigger: GACCCAGGCATTTCCACCCCAGCTCCATGTCAGTCT...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAGGAACACAGCTTCCCTaGGGAGCTGAAATACAGCTG +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTGTQLP*GAEIQL
Trigger: CAGCTGTATTTCAGCTCCTCAGGGAAGCTGTGTTCC...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAGGCTTCAGACTTTCCTaGTCCCCTTTCTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTGFRLS*SPFSTE
Trigger: CTCAGTGGAGAAAGGGGATCAGGAAAGTCTGAAGCC...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGGAAAAAGCACTTCATTaGTATAGTGGTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALEKALH*YSGASS
Trigger: AGAAGATGCACCACTATATCAATGAAGTGCTTTTTC...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTATCCTGTGATCTATGCTaGAGTCGGGAGGTGAAATTT +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLSCDLC*SREVKF
Trigger: AAATTTCACCTCCCGACTTCAGCATAGATCACAGGA...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACTCCAACAAACTGTCTTaGTTGGCAATTGGTAACACC +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNSNKLS*LAIGNT
Trigger: GGTGTTACCAATTGCCAAGCAAGACAGTTTGTTGGA...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCATGTACACATTCCACTTaGTCGTGGAGAAAAAGCACT +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPCTHST*SWRKST
Trigger: AGTGCTTTTTCTCCACGAGCAAGTGGAATGTGTACA...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCTGTCATCGGTTCTTTTaGTTCCTTCCTCTTGCATGT +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLCHRFF*FLPLAC
Trigger: ACATGCAAGAGGAAGGAAGCAAAAGAACCGATGACA...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACCAACTGTACAGAGTGTaGATGGATTGCTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHQLYRV*MDCSFP
Trigger: AGGAAAGGAGCAATCCATGCACACTCTGTACAGTTG...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACACAGCTGGGACACCATaGAAGAATAAATTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNTAGTP*KNKLEA
Trigger: AGCTTCCAATTTATTCTTCCATGGTGTCCCAGCTGT...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACTCATCCTGTATGGTCTaGTTCAAATACCGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHSSCMV*FKYRCA
Trigger: TGCACACCGGTATTTGAACCAGACCATACAGGATGA...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACATGCATCATCCTGTATaGTCTGGTTCAAATACCGGT +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNMHHPV*SGSNTG
Trigger: ACCGGTATTTGAACCAGACCATACAGGATGATGCAT...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGACTTGTTCCAGGAGCTaGAGGTCAGAAACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLTCSRS*RSETKA
Trigger: CGCCTTCGTTTCTGACCTCCAGCTCCTGGAACAAGT...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCATGTAATTTACACTGCTaGAGAACAAGTCGACATCGC +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPCNLHC*RTSRHR
Trigger: GCGATGTCGACTTGTTCTCCAGCAGTGTAAATTACA...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATTGTAATTTACACTGCTaGAGAACAAGTCGACATCGC +
Preference number: 4 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNCNLHC*RTSRHR
Trigger: GCGATGTCGACTTGTTCTCCAGCAGTGTAAATTACA...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGCACAAATCATTGAGTTaGTCAGCATGCCAGTATTTT +
Preference number: 4 (lower is better)
Translates to: TAQNFPTADESTSMNKALHKSLS*SACQYF
Trigger: AAAATACTGGCATGCTGACCAACTCAATGATTTGTG...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGCTTCACGGGGGAATATaGGATCTTGGGGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLLHGGI*DLGEGA
Trigger: AGCTCCTTCCCCAAGATCCCATATTCCCCCGTGAAG...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGTCAGGCCACATCAAATaGTGGTGTCCCAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVSGHIK*WCPRAQ
Trigger: CTGAGCTCTGGGACACCACCATTTGATGTGGCCTGA...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAAAACGTTACATAGCTaGAAGCAACCACAATGTGGA +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNKTLHS*KQPQCG
Trigger: TCCACATTGTGGTTGCTTTCAGCTATGTAACGTTTT...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAATCAGAATTTCTGCAATaGAGGCATTATCATACCGAG +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQSEFLQ*RHYHTE
Trigger: CTCGGTATGATAATGCCTTCATTGCAGAAATTCTGA...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCTCAGAATTTCTGCAATaGAGGCATTATCATACCGAG +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLSEFLQ*RHYHTE
Trigger: CTCGGTATGATAATGCCTTCATTGCAGAAATTCTGA...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGTTCCCGGGCAATGTCTaGAGCATTCTGAATGACCAG +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLFPGNV*SILNDQ
Trigger: CTGGTCATTCAGAATGCTTCAGACATTGCCCGGGAA...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAACTTATAGACAACCGTaGGTATCCATCTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLTYRQP*VSIFFR
Trigger: CCTGAAGAAGATGGATACTCACGGTTGTCTATAAGT...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACCGAATGTCTCCAAGGTaGAATATTGCTGCTAGAATT +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNRMSPR*NIAARI
Trigger: AATTCTAGCAGCAATATTGCACCTTGGAGACATTCG...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAGAATCTTCTTCATGGTaGTGTAGTCGTCGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTESSSW*CSRRCA
Trigger: CGCACAGCGACGACTACAGCACCATGAAGAAGATTC...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACAACGTGTTTAACCGTGTaGCATGTGATTTCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTTCLTV*HVISCD
Trigger: ATCACAGGAAATCACATGGCACACGGTTAAACACGT...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGCGATGCAGCCCCTACTaGTCAAACCAGTACATGGCA +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQRCSPY*SNQYMA
Trigger: TGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCG...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTATCGATTTCCATCTCATaGGATCGAAAAACGTTACAT +
Preference number: 4 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVSISIS*DRKTLH
Trigger: ATGTAACGTTTTTCGATCCCATGAGATGGAAATCGA...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGAATGAGAAAATTGCTCTaGCCAAGAGGTTGTGAAACA +
Preference number: 4 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRMRKLL*PRGCET
Trigger: TGTTTCACAACCTCTTGGCCAGAGCAATTTTCTCAT...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACAAAACGTTACATAGCTaGAAGCAACCACAATGTGGA +
Preference number: 4 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHKTLHS*KQPQCG
Trigger: TCCACATTGTGGTTGCTTTCAGCTATGTAACGTTTT...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356711.7
CDS-3UTR TCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACTCAACAAGTAGAAAATaGGAAAATTGCTCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNSTSRK*ENCSGQ
Trigger: TTGGCCAGAGCAATTTTCTCATTTTCTACTTGTTGA...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGAGAAAAAGCACTTCATTaGTATAGTGGTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: TWLVVSETQLCLCTFYNREKALH*YSGASS
Trigger: AGAAGATGCACCACTATATCAATGAAGTGCTTTTTC...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR TCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCGAAAAAGCACTTCATTaGTATAGTGGTGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLEKALH*YSGASS
Trigger: AGAAGATGCACCACTATATCAATGAAGTGCTTTTTC...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGTTGGGCCTGATGCAATaGATGAAGTGTGGAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQLGLMQ*MKCGVH
Trigger: GTGCACTCCACACTTCATTCATTGCATCAGGCCCAA...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCAAAAACGTTACATAGCTaGAAGCAACAGCACTTGATA +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPKTLHS*KQQHLI
Trigger: TATCAAGTGCTGTTGCTTTCAGCTATGTAACGTTTT...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS-3UTR GCA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGATATCCAATGTCTGCATaGTTTTCTGTTCATCTTGAC +
Preference number: 4 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRYPMSA*FSVHLD
Trigger: GTCAAGATGAACAGAAAAGCATGCAGACATTGGATA...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGACCAATATCCAATGTCTaGATGCTTTTCTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRPISNV*MLFCSS
Trigger: AGATGAACAGAAAAGCATGCAGACATTGGATATTGG...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGGAATCTTCTTCATGGTaGTGTAGTCGTCGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQESSSW*CSRRCA
Trigger: CGCACAGCGACGACTACAGCACCATGAAGAAGATTC...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGAGTGTGCATGGATTaGTCCTTTCCTCCGCTACTC +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQRVCMD*SFPPLL
Trigger: GAGTAGCGGAGGAAAGGAGCAATCCATGCACACTCT...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAATCGATTTCCATCTCATaGGATCGAAAAACGTTACAT +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQSISIS*DRKTLH
Trigger: ATGTAACGTTTTTCGATCCCATGAGATGGAAATCGA...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACCATGGAAGAATAAATTaGAAGCTCCTTGTATGGGTT +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNHGRIN*KLLVWV
Trigger: AACCCATACAAGGAGCTTCCAATTTATTCTTCCATG...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACACTCAGCAATCTGTATaGTATGTCGTCGTATTATCA +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNTQQSV*YVVVLS
Trigger: TGATAATACGACGACATACCATACAGATTGCTGAGT...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCACTCAGCAATCTGTATaGTATGTCGTCGTATTATCA +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLTQQSV*YVVVLS
Trigger: TGATAATACGACGACATACCATACAGATTGCTGAGT...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCAACTCAGCAATCTGTATaGTATGTCGTCGTATTATCA +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPTQQSV*YVVVLS
Trigger: TGATAATACGACGACATACCATACAGATTGCTGAGT...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGGAATCTTCTTCATaGTGCTGTAGTCGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLEESSS*CCSRRC
Trigger: ACAGCGACGACTACAGCACCATGAAGAAGATTCCTC...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGTTTTGTCTAAATGCGTaGAGAGAAGCCCCAGCGCAT +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVFCLNA*REAPAH
Trigger: ATGCGCTGGGGCTTCTCTCCACGCATTTAGACAAAA...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGGATCATCTACTATGTTaGGGTCTCCACCATGTTCCA +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVDHLLC*GLHHVP
Trigger: TGGAACATGGTGGAGACCTCAACATAGTAGATGATC...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTATTCGACTGGAACAAATaGTTGATCACGACATTTTCA +
Preference number: 4 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLFDWNK*LITTFS
Trigger: TGAAAATGTCGTGATCAATCATTTGTTCCAGTCGAA...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGGAGGGATCCTGTTTGTaGCAATTTCGACTGGAACAA +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVEGSCL*QFRLEQ
Trigger: TTGTTCCAGTCGAAATTGTCACAAACAGGATCCCTC...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTATCTGGCAGCTTTaGGTTATTGGGCCTGATGCA +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQSIWQL*VIGPDA
Trigger: TGCATCAGGCCCAATAACTCAAAGCTGCCAGATACT...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGGTAGGCACAAATCATTaGGTTGGTCAGCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQVGTNH*VGQHAS
Trigger: ACTGGCATGCTGACCAACTCAATGATTTGTGCCTAC...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGGCTGAAGTCGGGAGGTaGAATTTAACTAAAGGGTAC +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVAEVGR*NLTKGY
Trigger: GTACCCTTTAGTTAAATTTCACCTCCCGACTTCAGC...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGGCATTATGGGAGGGTTaGGGATATACAGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQALWEG*GYTVRE
Trigger: TTCCCTCACTGTATATCCTCAACCCTCCCATAATGC...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAAACACAGACCTTTTGTTaGATCTTTGAACATAATGTC +
Preference number: 4 (lower is better)
Translates to: LYLVSGLRDSALLVYILQTQTFC*IFEHNV
Trigger: GACATTATGTTCAAAGATGCAACAAAAGGTCTGTGT...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR GCA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCACACAGACCTTTTGTTaGATCTTTGAACATAATGTC +
Preference number: 4 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLTQTFC*IFEHNV
Trigger: GACATTATGTTCAAAGATGCAACAAAAGGTCTGTGT...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACATTGAGTTGGTCAGCATaGCAGTATTTTAGAAACACT +
Preference number: 4 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTLSWSA*QYFRNT
Trigger: AGTGTTTCTAAAATACTGGCATGCTGACCAACTCAA...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGCAGTACATGGCAGCGTaGTCATTTGTACTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQQYMAA*SFVLCR
Trigger: CCTACACAGTACAAATGAGCACGCTGCCATGTACTG...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACGTTGTGAAACAAGTCTaGATTTCTCTAGCAAATATG +
Preference number: 4 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNVVKQV*ISLANM
Trigger: CATATTTGCTAGAGAAATCCAGACTTGTTTCACAAC...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGGCTCAAACCAGTACATaGCAGCGTGCTCATTTGTAC +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQAQTST*QRAHLY
Trigger: GTACAAATGAGCACGCTGCCATGTACTGGTTTGAGC...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGGTTGTACCTCTTTATTaGCACAGTAACTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLVVPLY*HSNFSK
Trigger: CTTTGAAAAGTTACTGTGCCAATAAAGAGGTACAAC...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCAGTTGTACCTCTTTATTaGCACAGTAACTTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPVVPLY*HSNFSK
Trigger: CTTTGAAAAGTTACTGTGCCAATAAAGAGGTACAAC...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGGATCATCTACTATGTTaGGGTCTCCACCATGTTCCA +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQDHLLC*GLHHVP
Trigger: TGGAACATGGTGGAGACCTCAACATAGTAGATGATC...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGTCCAACAAACTGTCTTaGTTGGCAATTGGTAACACC +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVSNKLS*LAIGNT
Trigger: GGTGTTACCAATTGCCAAGCAAGACAGTTTGTTGGA...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGTTTCCATTCACATCCTaGAGAAGGACATTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQFPFTS*RRTLAP
Trigger: TGGAGCCAATGTCCTTCTCCAGGATGTGAATGGAAA...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGTGTATCACCACGAGATaGATAAGAAAGAACCCACAC +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLCITTR*IRKNPH
Trigger: GTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACA...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
3UTR CAA 72 bp AATGAATATGATCATTTTACACCACCGGCTATGGATTaGAAGCCATACGTGTTTAACCGTGTGCCATGTGAT +
Preference number: 4 (lower is better)
Translates to: NEYDHFTPPAMD*KPYVFNRVPCD
Trigger: ATCACATGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATGATCATATTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGTGTGGAGTGCACTTCTaGAGTTTTCCAATAATATCC +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLCGVHF*SFPIIS
Trigger: GGATATTATTGGAAAACTTCAGAAGTGCACTCCACA...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACACGAATGTCTCCAAGGTaGAATATTGCTGCTAGAATT +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTRMSPR*NIAARI
Trigger: AATTCTAGCAGCAATATTGCACCTTGGAGACATTCG...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGCCTTGTAATTTACACTaGTGGAGAACAAGTCGACAT +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVPCNLH*WRTSRH
Trigger: ATGTCGACTTGTTCTCCAGCAGTGTAAATTACAAGG...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGACAGCTGGGACACCATaGAAGAATAAATTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQTAGTP*KNKLEA
Trigger: AGCTTCCAATTTATTCTTCCATGGTGTCCCAGCTGT...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGTCCAAAACTCCATTCTaGTTACCAGGAGAATATGCT +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLSKTPF*LPGEYA
Trigger: AGCATATTCTCCTGGTAACCAGAATGGAGTTTTGGA...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR TCA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGTCAGAATTTCTGCAATaGAGGCATTATCATACCGAG +
Preference number: 4 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQSEFLQ*RHYHTE
Trigger: CTCGGTATGATAATGCCTTCATTGCAGAAATTCTGA...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR GCA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGCCAATATCCAATGTCTaGATGCTTTTCTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVPISNV*MLFCSS
Trigger: AGATGAACAGAAAAGCATGCAGACATTGGATATTGG...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGCATGGAAGAATAAATTaGAAGCTCCTTGTATGGGTT +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLHGRIN*KLLVWV
Trigger: AACCCATACAAGGAGCTTCCAATTTATTCTTCCATG...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACACATGGAAGAATAAATTaGAAGCTCCTTGTATGGGTT +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTHGRIN*KLLVWV
Trigger: AACCCATACAAGGAGCTTCCAATTTATTCTTCCATG...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGCACAAATCATTGAGTTaGTCAGCATGCCAGTATTTT +
Preference number: 4 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLHKSLS*SACQYF
Trigger: AAAATACTGGCATGCTGACCAACTCAATGATTTGTG...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CCA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAGTTGTGAAACAAGTCTaGATTTCTCTAGCAAATATG +
Preference number: 4 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTVVKQV*ISLANM
Trigger: CATATTTGCTAGAGAAATCCAGACTTGTTTCACAAC...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 90 bp TCGTACACGGACTCCCCGGGGTCCGGGCTATCGGGCCTGGCCGCGTaGCCCAGCATCTCGATGTACACAGGCTCGCTGTCGTCCTCGTCA +
Preference number: 5 (lower is better)
Translates to: SYTDSPGSGLSGLAA*PSISMYTGSLSSSS
Trigger: TGACGAGGACGACAGCGAGCCTGTGTACATCGAGATGCTGGGGCACGCGGCCAGGCCCGATAGCCCGGACCCCGGGGAGTCCGTGTACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 90 bp ACCGAGTGCAGCGAAGGAGACCAGATGGACGGGCCAACGAGGCACTaGCCCAGGCCATCCACGGCCGCGCAGACTGACATGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TECSEGDQMDGPTRH*PRPSTAAQTDMELG
Trigger: CCCCAGCTCCATGTCAGTCTGCGCGGCCGTGGATGGCCTGGGCCAGTGCCTCGTTGGCCCGTCCATCTGGTCTCCTTCGCTGCACTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 90 bp CGGGCCAACGAGGCACTGGCCCAGGCCATCCACGGCCGCGCAGACTaGCATGGAGCTGGGGTGGAAATGCCTGGGTCCACTCTTGTCATC +
Preference number: 5 (lower is better)
Translates to: RANEALAQAIHGRAD*HGAGVEMPGSTLVI
Trigger: GATGACAAGAGTGGACCCAGGCATTTCCACCCCAGCTCCATGTCAGTCTGCGCGGCCGTGGATGGCCTGGGCCAGTGCCTCGTTGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 90 bp GGCCCCTTCCGGCTTCTTCAGAAGGCTGGGCTTCTTGCAAGGTGGTaGGGGAGGCACCCTGGGCTCAGCGTGGTGCAGGATCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GPFRLLQKAGLLARW*GRHPGLSVVQDLLP
Trigger: TGGCAGCAGATCCTGCACCACGCTGAGCCCAGGGTGCCTCCCCCACCACCTTGCAAGAAGCCCAGCCTTCTGAAGAAGCCGGAAGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 90 bp ACGGCAGCCTGTTGCAGGAGGCCCCTTCCGGCTTCTTCAGAAGGCTaGGCTTCTTGCAAGGTGGTGGGGGAGGCACCCTGGGCTCAGCGT +
Preference number: 5 (lower is better)
Translates to: TAACCRRPLPASSEG*ASCKVVGEAPWAQR
Trigger: ACGCTGAGCCCAGGGTGCCTCCCCCACCACCTTGCAAGAAGCCCAGCCTTCTGAAGAAGCCGGAAGGGGCCTCCTGCAACAGGCTGCCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCTCAGACGGCAGCCTGTaGCAGGAGGCCCCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCSDGSL*QEAPSG
Trigger: GCCGGAAGGGGCCTCCTGCAACAGGCTGCCGTCTGA...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 90 bp CGTGGAGACGGGAGGCTGCTGCTGTCATCCATGCTGAACACCGAGTaGAGCGAAGGAGACCAGATGGACGGGCCAACGAGGCACTGGCCC +
Preference number: 5 (lower is better)
Translates to: RGDGRLLLSSMLNTE*SEGDQMDGPTRHWP
Trigger: GGGCCAGTGCCTCGTTGGCCCGTCCATCTGGTCTCCTTCGCTGCACTCGGTGTTCAGCATGGATGACAGCAGCAGCCTCCCGTCTCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 90 bp TGTTGCAGGAGGCCCCTTCCGGCTTCTTCAGAAGGCTGGGCTTCTTaGAAGGTGGTGGGGGAGGCACCCTGGGCTCAGCGTGGTGCAGGA +
Preference number: 5 (lower is better)
Translates to: CCRRPLPASSEGWAS*KVVGEAPWAQRGAG
Trigger: TCCTGCACCACGCTGAGCCCAGGGTGCCTCCCCCACCACCTTGCAAGAAGCCCAGCCTTCTGAAGAAGCCGGAAGGGGCCTCCTGCAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 90 bp GGCTTCTTGTGGTTCTTGCCAGAGAGCCCCAGGTCTCCTTGTCACTaGCGTGTGGGAGACCCAGGGGCGCACGTCCCTGGGCGAGTTTCC +
Preference number: 5 (lower is better)
Translates to: GFLWFLPESPRSPCH*RVGDPGAHVPGRVS
Trigger: GGAAACTCGCCCAGGGACGTGCGCCCCTGGGTCTCCCACACGCCAGTGACAAGGAGACCTGGGGCTCTCTGGCAAGAACCACAAGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS CCA 90 bp CAACGAGGCACTGGCCCAGGCCATCCACGGCCGCGCAGACTGACATaGAGCTGGGGTGGAAATGCCTGGGTCCACTCTTGTCATCGGTTC +
Preference number: 5 (lower is better)
Translates to: QRGTGPGHPRPRRLT*SWGGNAWVHSCHRF
Trigger: GAACCGATGACAAGAGTGGACCCAGGCATTTCCACCCCAGCTCCATGTCAGTCTGCGCGGCCGTGGATGGCCTGGGCCAGTGCCTCGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 90 bp GGGGCTGTTTCCGTGGAGACGGGAGGCTGCTGCTGTCATCCATGCTaGACACCGAGTGCAGCGAAGGAGACCAGATGGACGGGCCAACGA +
Preference number: 5 (lower is better)
Translates to: GAVSVETGGCCCHPC*TPSAAKETRWTGQR
Trigger: TCGTTGGCCCGTCCATCTGGTCTCCTTCGCTGCACTCGGTGTTCAGCATGGATGACAGCAGCAGCCTCCCGTCTCCACGGAAACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 90 bp GGTGGTGGGGGAGGCACCCTGGGCTCAGCGTGGTGCAGGATCTGCTaGCAGTCTTGTCCTTCCTCACAGAGCTTTCTCCTCCAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: GGGGGTLGSAWCRIC*QSCPSSQSFLLQSK
Trigger: CTTGGACTGGAGGAGAAAGCTCTGTGAGGAAGGACAAGACTGGCAGCAGATCCTGCACCACGCTGAGCCCAGGGTGCCTCCCCCACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 90 bp GGCACTGGCCCAGGCCATCCACGGCCGCGCAGACTGACATGGAGCTaGGGTGGAAATGCCTGGGTCCACTCTTGTCATCGGTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: GTGPGHPRPRRLTWS*GGNAWVHSCHRFFC
Trigger: GCAAAAGAACCGATGACAAGAGTGGACCCAGGCATTTCCACCCCAGCTCCATGTCAGTCTGCGCGGCCGTGGATGGCCTGGGCCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCAGCAGGCTGCCATCATaGAGCTCGCTGAGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCSRLPS*SSLSVA
Trigger: GGCAACGCTCAGCGAGCTCAATGATGGCAGCCTGCT...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 90 bp GGCTTCTTGCAAGGTGGTGGGGGAGGCACCCTGGGCTCAGCGTGGTaGAGGATCTGCTGCCAGTCTTGTCCTTCCTCACAGAGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: GFLQGGGGGTLGSAW*RICCQSCPSSQSFL
Trigger: GAGAAAGCTCTGTGAGGAAGGACAAGACTGGCAGCAGATCCTGCACCACGCTGAGCCCAGGGTGCCTCCCCCACCACCTTGCAAGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 90 bp GGCCACATCAAATGGTGGTGTCCCAGAGCTCAGACGGCAGCCTGTTaGAGGAGGCCCCTTCCGGCTTCTTCAGAAGGCTGGGCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: GHIKWWCPRAQTAAC*RRPLPASSEGWASC
Trigger: GCAAGAAGCCCAGCCTTCTGAAGAAGCCGGAAGGGGCCTCCTGCAACAGGCTGCCGTCTGAGCTCTGGGACACCACCATTTGATGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 90 bp CTGGGCTTCTTGCAAGGTGGTGGGGGAGGCACCCTGGGCTCAGCGTaGTGCAGGATCTGCTGCCAGTCTTGTCCTTCCTCACAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: LGFLQGGGGGTLGSA*CRICCQSCPSSQSF
Trigger: AAAGCTCTGTGAGGAAGGACAAGACTGGCAGCAGATCCTGCACCACGCTGAGCCCAGGGTGCCTCCCCCACCACCTTGCAAGAAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCCCGCTGAGCTTGGTGTaGGGGCTGCGCTTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: FLRYSLALATSTLFPASLPLSLV*GLRLGF
Trigger: AAAGCCCAAGCGCAGCCCCAACACCAAGCTCAGCGG...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCACACTCCTCCCCGAGTaGAAGAGGCTGGCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: FLRYSLALATSTLFPASLTLLPE*KRLASS
Trigger: CGAGCTCGCCAGCCTCTTCAACTCGGGGAGGAGTGT...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 90 bp TGGCCCAGGCCATCCACGGCCGCGCAGACTGACATGGAGCTGGGGTaGAAATGCCTGGGTCCACTCTTGTCATCGGTTCTTTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: WPRPSTAAQTDMELG*KCLGPLLSSVLLLP
Trigger: AGGAAGCAAAAGAACCGATGACAAGAGTGGACCCAGGCATTTCCACCCCAGCTCCATGTCAGTCTGCGCGGCCGTGGATGGCCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGCAGGCTGCCATCATaGAGCTCGCTGAGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: PSACQKAAFCCCSPESVGSRLPS*SSLSVA
Trigger: GGCAACGCTCAGCGAGCTCAATGATGGCAGCCTGCT...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTCCGCTGAGCTTGGTGTaGGGGCTGCGCTTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRPLSLV*GLRLGF
Trigger: AAAGCCCAAGCGCAGCCCCAACACCAAGCTCAGCGG...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCGCAGGAGGCATTAGCTaGACCTGCTCGGGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: PSACQKAAFCCCSPESVGAGGIS*TCSGLV
Trigger: CACCAAACCCGAGCAGGTCAAGCTAATGCCTCCTGC...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGGCTGCACGGGGTACTaGAGGTTGGTCTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: RSPSACQKAAFCCCSPESGCTGY*RLVSRT
Trigger: AGTCCTGGAGACCAACCTCAAGTACCCCGTGCAGCC...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCGCTCGGCCGGACCCGTaGAACAGCGCCAGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLARPDP*NSARPG
Trigger: CCCCGGCCTGGCGCTGTTCAACGGGTCCGGCCGAGC...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCTCAGACGGCAGCCTGTaGCAGGAGGCCCCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: SHCSELSDSRRKHINEQGSDGSL*QEAPSG
Trigger: GCCGGAAGGGGCCTCCTGCAACAGGCTGCCGTCTGA...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCTTGACCTGCTCGGGTTaGGTGGAACCGCTCATCATG +
Preference number: 5 (lower is better)
Translates to: PSACQKAAFCCCSPESVGLTCSG*VEPLIM
Trigger: CATGATGAGCGGTTCCACCAAACCCGAGCAGGTCAA...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCTTGCCAGGTCATCGTTaGGGGCAGGAGGCATTAGCT +
Preference number: 5 (lower is better)
Translates to: PSACQKAAFCCCSPESVGLPGHR*GQEALA
Trigger: AGCTAATGCCTCCTGCCCCAAACGATGACCTGGCAA...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 90 bp CATCCACGGCCGCGCAGACTGACATGGAGCTGGGGTGGAAATGCCTaGGTCCACTCTTGTCATCGGTTCTTTTGCTTCCTTCCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: HPRPRRLTWSWGGNA*VHSCHRFFCFLPLA
Trigger: TGCAAGAGGAAGGAAGCAAAAGAACCGATGACAAGAGTGGACCCAGGCATTTCCACCCCAGCTCCATGTCAGTCTGCGCGGCCGTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTTTGCCAGGTCATCGTTaGGGGCAGGAGGCATTAGCT +
Preference number: 5 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRLPGHR*GQEALA
Trigger: AGCTAATGCCTCCTGCCCCAAACGATGACCTGGCAA...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACCGGGCCAGAGCTTCGTaGGCCGCTTCCCTGGCCGCG +
Preference number: 5 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHRARAS*AASLAA
Trigger: CGCGGCCAGGGAAGCGGCCAACGAAGCTCTGGCCCG...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACGGGCCAGAGCTTCGTaGGCCGCTTCCCTGGCCGCG +
Preference number: 5 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTRARAS*AASLAA
Trigger: CGCGGCCAGGGAAGCGGCCAACGAAGCTCTGGCCCG...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCCCACCGGCTATGGATTaGAAGCCATACGTGTTTAAC +
Preference number: 5 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCPPAMD*KPYVFN
Trigger: GTTAAACACGTATGGCTTCAAATCCATAGCCGGTGG...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 90 bp GCTTTGATTTGCTCACAGCGCATGCGCTTCACTAGACGCTGCCGTTaGCCAAGGGGAAGGGACTCTAGCAAGCACTGGTCGATTTCCATC +
Preference number: 5 (lower is better)
Translates to: ALICSQRMRFTRRCR*PRGRDSSKHWSISI
Trigger: GATGGAAATCGACCAGTGCTTGCTAGAGTCCCTTCCCCTTGGCCAACGGCAGCGTCTAGTGAAGCGCATGCGCTGTGAGCAAATCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCAGCCGAAGCACTTCTTaGTCATTGTGGTGGATAATC +
Preference number: 5 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCSRSTS*SLWWII
Trigger: GATTATCCACCACAATGACAAAGAAGTGCTTCGGCT...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTGCAGGAGGCATTAGCTaGACCTGCTCGGGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICAGGIS*TCSGLV
Trigger: CACCAAACCCGAGCAGGTCAAGCTAATGCCTCCTGC...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGCCAGGTCATCGTTaGGGGCAGGAGGCATTAGCT +
Preference number: 5 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCLPGHR*GQEALA
Trigger: AGCTAATGCCTCCTGCCCCAAACGATGACCTGGCAA...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACGAAGGCAGCCTTCTGTaGTTGCAGCCCGGAATCAGT +
Preference number: 5 (lower is better)
Translates to: SSKTRWSGATAQNFPTADEGSLL*LQPGIS
Trigger: ACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCACAGAGTGTGCATGGATaGCTCCTTTCCTCCGCTACT +
Preference number: 5 (lower is better)
Translates to: RSPSACQKAAFCCCSPESQSVHG*LLSSAT
Trigger: AGTAGCGGAGGAAAGGAGCAATCCATGCACACTCTG...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 90 bp ACCCTTCCTGCTTCTGAAAAGCCTTCTCGCGCTCATAGTAGGCTTTaGTTTGCTCACAGCGCATGCGCTTCACTAGACGCTGCCGTTGGC +
Preference number: 5 (lower is better)
Translates to: TLPASEKPSRAHSRL*FAHSACASLDAAVG
Trigger: GCCAACGGCAGCGTCTAGTGAAGCGCATGCGCTGTGAGCAAATCAAAGCCTACTATGAGCGCGAGAAGGCTTTTCAGAAGCAGGAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAGCTCGGCCGGACCCGTaGAACAGCGCCAGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTARPDP*NSARPG
Trigger: CCCCGGCCTGGCGCTGTTCAACGGGTCCGGCCGAGC...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCTGCATTATGGGAGGGTaGAGGATATACAGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: PSACQKAAFCCCSPESVGCIMGG*RIYSEG
Trigger: TCCCTCACTGTATATCCTCAACCCTCCCATAATGCA...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TTCCTCCGCTACTCTCTCGCTCTGGCCACGTCCACACTTTTCCCAGCCTCTCTCATGCACACGACATGTTaGAATCTGGAATCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: FLRYSLALATSTLFPASLMHTTC*NLESSV
Trigger: CACACTGGATTCCAGATTCAAACATGTCGTGTGCAT...GAGAGAGGCTGGGAAAAGTGTGGACGTGGCCAGAGCGAGAGAGTAGCGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCTCATTAAGTGTGGTCTaGGCATGTCCAAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: PSACQKAAFCCCSPESVGSLSVV*ACPKAS
Trigger: AGAAGCCTTTGGACATGCCAAGACCACACTTAATGA...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCACATGGTAACTCCCTCTaGTACACATTCCACTTGCTC +
Preference number: 5 (lower is better)
Translates to: RSPSACQKAAFCCCSPESHGNSL*YTFHLL
Trigger: GAGCAAGTGGAATGTGTACAAGAGGGAGTTACCATG...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACGGGTCCCTCTTTGGCTaGGGCGGGGGCTGTTTCCGT +
Preference number: 5 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHGSLFG*GGGCFR
Trigger: ACGGAAACAGCCCCCGCCCAAGCCAAAGAGGGACCC...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGTCGCCCTTCTGGCTCTaGGAGTACTGCGGGGACAGC +
Preference number: 5 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLSPFWL*EYCGDS
Trigger: GCTGTCCCCGCAGTACTCCAAGAGCCAGAAGGGCGA...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTACCACGGGGGCAGAGTTaGGCTTTGGGTGAACCTTGG +
Preference number: 5 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVPRGQS*ALGEPW
Trigger: CCAAGGTTCACCCAAAGCCAAACTCTGCCCCCGTGG...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCACACTCCTCCCCGAGTaGAAGAGGCTGGCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLTLLPE*KRLASS
Trigger: CGAGCTCGCCAGCCTCTTCAACTCGGGGAGGAGTGT...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACGCTCAATTCATAGTTTaGCAAGGGGTGACACTGGCG +
Preference number: 5 (lower is better)
Translates to: SSKTRWSGATAQNFPTADAQFIV*QGVTLA
Trigger: CGCCAGTGTCACCCCTTGCAAAACTATGAATTGAGC...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGAAGCCCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGAAGTTTCACCAGATTaGTCTGGCCATATTTGGCTG +
Preference number: 5 (lower is better)
Translates to: RSPSACQKAAFCCCSPESEVSPD*SGHIWL
Trigger: CAGCCAAATATGGCCAGACAAATCTGGTGAAACTTC...TGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTAACAAACTGTCTTGCTaGGCAATTGGTAACACCAGG +
Preference number: 5 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRNKLSC*AIGNTR
Trigger: CCTGGTGTTACCAATTGCCAAGCAAGACAGTTTGTT...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACGCAGGAGGCATTAGCTaGACCTGCTCGGGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYAGGIS*TCSGLV
Trigger: CACCAAACCCGAGCAGGTCAAGCTAATGCCTCCTGC...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAAAGCAGGCTGCCATCATaGAGCTCGCTGAGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: LYLVSGLRDSALLVYILQSRLPS*SSLSVA
Trigger: GGCAACGCTCAGCGAGCTCAATGATGGCAGCCTGCT...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp ATCATGCAGTGTAAGTCCCGGGGGACGAGCGCTGTGCGATGCAGCCCCTACTGCTGCAGTTCAAAATACTaGATGAAGCAACTGGACAAA +
Preference number: 5 (lower is better)
Translates to: IMQCKSRGTSAVRCSPYCCSSKY*MKQLDK
Trigger: TTTGTCCAGTTGCTTCATCAAGTATTTTGAACTGCA...GCAGTAGGGGCTGCATCGCACAGCGCTCGTCCCCCGGGACTTACACTGCATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCAGCGCATGTCAGAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCACACCGCATTTGTGTTaGAGGATTCTAGGAGACTTT +
Preference number: 5 (lower is better)
Translates to: PSACQKAAFCCCSPESVGTPHLC*RILGDF
Trigger: AAAGTCTCCTAGAATCCTCAAACACAAATGCGGTGT...GCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTCTGACATGCGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTCCAGTGGCTTATACCTaGACAGGAAATCCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICPVAYT*TGNPRR
Trigger: CCTTCTCGGATTTCCTGTCAAGGTATAAGCCACTGG...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCGATCTGCTGCCAGTCTaGTCCTTCCTCACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: SHCSELSDSRRKHINEQGDLLPV*SFLTEL
Trigger: AAGCTCTGTGAGGAAGGACAAGACTGGCAGCAGATC...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAGGCAGCCTTCTGTTGTaGCAGCCCGGAATCAGTAGG +
Preference number: 5 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVGSLLL*QPGISR
Trigger: CCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCC...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 90 bp ACAAGAAGCAGGACAATATCAGGGTTATCGCAGGCACAGGCAATGTaGATGGGCGTCCAGAAGTCTTCATCCTGGTGGTTGACGTTGACT +
Preference number: 5 (lower is better)
Translates to: TRSRTISGLSQAQAM*MGVQKSSSWWLTLT
Trigger: AGTCAACGTCAACCACCAGGATGAAGACTTCTGGACGCCCATGCACATTGCCTGTGCCTGCGATAACCCTGATATTGTCCTGCTTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS CCA 90 bp TCGCAGGCACAGGCAATGTGCATGGGCGTCCAGAAGTCTTCATCCTaGTGGTTGACGTTGACTCCTCTGTCAATCAGAATTTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: SQAQAMCMGVQKSSS*WLTLTPLSIRISAM
Trigger: CATTGCAGAAATTCTGATTGACAGAGGAGTCAACGTCAACCACCAGGATGAAGACTTCTGGACGCCCATGCACATTGCCTGTGCCTGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGAAGTTTCACCAGATTaGTCTGGCCATATTTGGCTG +
Preference number: 5 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCEVSPD*SGHIWL
Trigger: CAGCCAAATATGGCCAGACAAATCTGGTGAAACTTC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTCATTAAGTGTGGTCTaGGCATGTCCAAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCSLSVV*ACPKAS
Trigger: AGAAGCCTTTGGACATGCCAAGACCACACTTAATGA...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTACGACTGTACAGGGACTaGGCCAAGAGGTCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVRLYRD*AKRSRK
Trigger: TTTCCGAGACCTCTTGGCCAAGTCCCTGTACAGTCG...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTACACATTCCACTaGCTCGTGGAGAAAAAGCAC +
Preference number: 5 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCLYTFH*LVEKKH
Trigger: GTGCTTTTTCTCCACGAGCAAGTGGAATGTGTACAA...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTGCACAAATCATTGAGTaGGTCAGCATGCCAGTATTT +
Preference number: 5 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRAQIIE*VSMPVF
Trigger: AAATACTGGCATGCTGACCAACTCAATGATTTGTGC...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAGTGTTGGGGCTGCGCTaGGGCTTTCGAGGAGGAATC +
Preference number: 5 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLVLGLR*GFRGGI
Trigger: GATTCCTCCTCGAAAGCCCAAGCGCAGCCCCAACAC...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAGGGCAGAGTTTGGCTTaGGGTGAACCTTGGGCGCCT +
Preference number: 5 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLGQSLA*GEPWAP
Trigger: AGGCGCCCAAGGTTCACCCAAAGCCAAACTCTGCCC...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGCCTCAGGATGCACTATaGCATGGAGGCTCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: TAQNFPTADESTSMNKALPQDAL*HGGSVP
Trigger: TGGAACAGAGCCTCCATGCAATAGTGCATCCTGAGG...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS CCA 90 bp CAGGCACAGGCAATGTGCATGGGCGTCCAGAAGTCTTCATCCTGGTaGTTGACGTTGACTCCTCTGTCAATCAGAATTTCTGCAATGAAG +
Preference number: 5 (lower is better)
Translates to: QAQAMCMGVQKSSSW*LTLTPLSIRISAMK
Trigger: CTTCATTGCAGAAATTCTGATTGACAGAGGAGTCAACGTCAACCACCAGGATGAAGACTTCTGGACGCCCATGCACATTGCCTGTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTAGCCGAAGCACTTCTTaGTCATTGTGGTGGATAATC +
Preference number: 5 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICSRSTS*SLWWII
Trigger: GATTATCCACCACAATGACAAAGAAGTGCTTCGGCT...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACTTTGTCTGGCCATATTaGGCTGCCAAGTGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYFVWPY*AAKWRG
Trigger: TCCCCTCCACTTGGCAGCCAAATATGGCCAGACAAA...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACTCACGAGGTGTGGGTTaGCCTGATGCATCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYSRGVG*PDASGE
Trigger: TTCTCCTGATGCATCAGGCAAACCCACACCTCGTGA...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGATTGACCTGCTCGGGTTaGGTGGAACCGCTCATCATG +
Preference number: 5 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRLTCSG*VEPLIM
Trigger: CATGATGAGCGGTTCCACCAAACCCGAGCAGGTCAA...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGAGGTGTCTTATGATTaGTTTGCTGGCTTCAGACTT +
Preference number: 5 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCEVSYD*FAGFRL
Trigger: AAGTCTGAAGCCAGCAAACAAATCATAAGACACCTC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp AGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCAGAACTTTCCGACAGCCGACGAGGTGTCTTATGATTaGTTTGCTGGCTTCAGACTT +
Preference number: 5 (lower is better)
Translates to: SSKTRWSGATAQNFPTADEVSYD*FAGFRL
Trigger: AAGTCTGAAGCCAGCAAACAAATCATAAGACACCTC...GTCGGCTGTCGGAAAGTTCTGAGCAGTGGCTCCAGACCACCTTGTCTTGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACGACTGTACAGGGACTaGGCCAAGAGGTCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: LYLVSGLRDSALLVYILQRLYRD*AKRSRK
Trigger: TTTCCGAGACCTCTTGGCCAAGTCCCTGTACAGTCG...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCCGACTGTACAGGGACTaGGCCAAGAGGTCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLRLYRD*AKRSRK
Trigger: TTTCCGAGACCTCTTGGCCAAGTCCCTGTACAGTCG...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GTCTCCAAGCTCCCTGACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCGCTTTTCTGTTCATCTaGACTGTGGAGGCAAGAATT +
Preference number: 5 (lower is better)
Translates to: VSKLPDCTWLVVSETQLCAFLFI*TVEARI
Trigger: AATTCTTGCCTCCACAGTCAAGATGAACAGAAAAGC...GCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTCAGGGAGCTTGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCGGGAGTACACCGCATTaGTGTTTGAGGATTCTAGGA +
Preference number: 5 (lower is better)
Translates to: SHCSELSDSRRKHINEQGGSTPH*CLRILG
Trigger: TCCTAGAATCCTCAAACACAAATGCGGTGTACTCCC...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAGCTGTACCGTGGTCTTaGAGGGCAACATTCCCATTC +
Preference number: 5 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVAVPWS*RATFPF
Trigger: GAATGGGAATGTTGCCCTCAAAGACCACGGTACAGC...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCTGTAGGCACAAATCATaGAGTTGGTCAGCATGCCAG +
Preference number: 5 (lower is better)
Translates to: SHCSELSDSRRKHINEQGCRHKS*SWSACQ
Trigger: CTGGCATGCTGACCAACTCAATGATTTGTGCCTACA...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCTCAATGAACAAGGCCTaGCATTATGGGAGGGTTGAG +
Preference number: 5 (lower is better)
Translates to: SHCSELSDSRRKHINEQGSMNKA*HYGRVE
Trigger: CTCAACCCTCCCATAATGCAAGGCCTTGTTCATTGA...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 90 bp TTGTGGTGGATAATCGCGTCCTGTAGCATGTCCGTGAGGTTGAAGTaGACTTTCGGATTCTTCGCATGCTTCAGCCTTTTCAGGAACCCT +
Preference number: 5 (lower is better)
Translates to: LWWIIASCSMSVRLK*TFGFFACFSLFRNP
Trigger: AGGGTTCCTGAAAAGGCTGAAGCATGCGAAGAATCCGAAAGTTCACTTCAACCTCACGGACATGCTACAGGACGCGATTATCCACCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS GCA 90 bp GCGGAGTTCCCCTCATTCAGGGCAGTAAACCGAATGTCTCCAAGGTaGAATATTGCTGCTAGAATTACGAACAGATTCTCCACCTCCAAG +
Preference number: 5 (lower is better)
Translates to: AEFPSFRAVNRMSPR*NIAARITNRFSTSK
Trigger: CTTGGAGGTGGAGAATCTGTTCGTAATTCTAGCAGCAATATTGCACCTTGGAGACATTCGGTTTACTGCCCTGAATGAGGGGAACTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS GCA 90 bp TGGCTCCAGCCCCACCATGGTAATCCGTGGTCAATGAAGCATTTCTaGAATTTATGGCTAGGTGCTTTGCCTCTGTCAGAAAGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: WLQPHHGNPWSMKHF*NLWLGALPLSESLK
Trigger: TTTCAGGCTTTCTGACAGAGGCAAAGCACCTAGCCATAAATTGCAGAAATGCTTCATTGACCACGGATTACCATGGTGGGGCTGGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS CCA 90 bp GTTTCAAAACAGCCAATTTCTCCCTGTTCAGAGAACGCTCCCCTGTaGATGCATCATCCTGTATGGTCTGGTTCAAATACCGGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: VSKQPISPCSENAPL*MHHPVWSGSNTGVH
Trigger: GTGCACACCGGTATTTGAACCAGACCATACAGGATGATGCATCCACAGGGGAGCGTTCTCTGAACAGGGAGAAATTGGCTGTTTTGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS-3UTR CAA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACTCCTGGTGGTTGACGTaGACTCCTCTGTCAATCAGA +
Preference number: 5 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYSWWLT*TPLSIR
Trigger: TCTGATTGACAGAGGAGTCAACGTCAACCACCAGGA...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACTTGACCTGCTCGGGTTaGGTGGAACCGCTCATCATG +
Preference number: 5 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHLTCSG*VEPLIM
Trigger: CATGATGAGCGGTTCCACCAAACCCGAGCAGGTCAA...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTATGCCAATTCATCTGTaGATACTTGTAACATTCCAG +
Preference number: 5 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSRMPIHL*ILVTFQ
Trigger: CTGGAATGTTACAAGTATCAACAGATGAATTGGCAT...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCTTGTACACATTCCACTaGCTCGTGGAGAAAAAGCAC +
Preference number: 5 (lower is better)
Translates to: SHCSELSDSRRKHINEQGLYTFH*LVEKKH
Trigger: GTGCTTTTTCTCCACGAGCAAGTGGAATGTGTACAA...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACGCTGTACCGTGGTCTTaGAGGGCAACATTCCCATTC +
Preference number: 5 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNAVPWS*RATFPF
Trigger: GAATGGGAATGTTGCCCTCAAAGACCACGGTACAGC...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGCTGTACCGTGGTCTTaGAGGGCAACATTCCCATTC +
Preference number: 5 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNAVPWS*RATFPF
Trigger: GAATGGGAATGTTGCCCTCAAAGACCACGGTACAGC...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGGGGTCCCTCTTTGGCTaGGGCGGGGGCTGTTTCCGT +
Preference number: 5 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQGSLFG*GGGCFR
Trigger: ACGGAAACAGCCCCCGCCCAAGCCAAAGAGGGACCC...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGTCGCCCTTCTGGCTCTaGGAGTACTGCGGGGACAGC +
Preference number: 5 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLSPFWL*EYCGDS
Trigger: GCTGTCCCCGCAGTACTCCAAGAGCCAGAAGGGCGA...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CGTCCACACTTTTCCCAGCCTCTCTCTTGCTACCTAGGGGTAGCACAGAGCCGTGAATTCCATGGTTATTaGCATTTCTGTCTTGAGTCT +
Preference number: 5 (lower is better)
Translates to: RPHFSQPLSCYLGVAQSREFHGY*HFCLES
Trigger: AGACTCAAGACAGAAATGCAAATAACCATGGAATTC...ACGGCTCTGTGCTACCCCTAGGTAGCAAGAGAGAGGCTGGGAAAAGTGTGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGAGAAGGCTGGGCTTCTaGCAAGGTGGTGGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLRRLGF*QGGGGG
Trigger: GCCTCCCCCACCACCTTGCAAGAAGCCCAGCCTTCT...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGCAGAGTGTGCATGGATaGCTCCTTTCCTCCGCTACT +
Preference number: 5 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLQSVHG*LLSSAT
Trigger: AGTAGCGGAGGAAAGGAGCAATCCATGCACACTCTG...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 90 bp TTTGTCTGGCCATATTTGGCTGCCAAGTGGAGGGGAGTCCAGTACTaGTCATCTACTATGTTGAGGTCTCCACCATGTTCCAGGATAAGA +
Preference number: 5 (lower is better)
Translates to: FVWPYLAAKWRGVQY*SSTMLRSPPCSRIR
Trigger: TCTTATCCTGGAACATGGTGGAGACCTCAACATAGTAGATGATCAGTACTGGACTCCCCTCCACTTGGCAGCCAAATATGGCCAGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS TCA 90 bp TCTGACGCCTTCTCCTCATTACAGTTCACGAGGTGTGGGTTTGCCTaGTGCATCAGGAGAAGTTTCACCAGATTTGTCTGGCCATATTTG +
Preference number: 5 (lower is better)
Translates to: SDAFSSLQFTRCGFA*CIRRSFTRFVWPYL
Trigger: CAAATATGGCCAGACAAATCTGGTGAAACTTCTCCTGATGCATCAGGCAAACCCACACCTCGTGAACTGTAATGAGGAGAAGGCGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS-3UTR CAA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCATCCTGGTGGTTGACGTaGACTCCTCTGTCAATCAGA +
Preference number: 5 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPSWWLT*TPLSIR
Trigger: TCTGATTGACAGAGGAGTCAACGTCAACCACCAGGA...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTCTGTTAACATACTCATaGGTCTCTGAAGCTTCATCT +
Preference number: 5 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICLLTYS*VSEASS
Trigger: AGATGAAGCTTCAGAGACCAATGAGTATGTTAACAG...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACTTTGTCTGGCCATATTaGGCTGCCAAGTGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHFVWPY*AAKWRG
Trigger: TCCCCTCCACTTGGCAGCCAAATATGGCCAGACAAA...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGGAAGTTTCACCAGATTaGTCTGGCCATATTTGGCTG +
Preference number: 5 (lower is better)
Translates to: TAQNFPTADESTSMNKALEVSPD*SGHIWL
Trigger: CAGCCAAATATGGCCAGACAAATCTGGTGAAACTTC...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTATCACGAGGTGTGGGTTaGCCTGATGCATCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLSRGVG*PDASGE
Trigger: TTCTCCTGATGCATCAGGCAAACCCACACCTCGTGA...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACATCACGAGGTGTGGGTTaGCCTGATGCATCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTSRGVG*PDASGE
Trigger: TTCTCCTGATGCATCAGGCAAACCCACACCTCGTGA...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTTGTCTTATGATTTGTTaGCTGGCTTCAGACTTTCCT +
Preference number: 5 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICCLMIC*LASDFP
Trigger: AGGAAAGTCTGAAGCCAGCAAACAAATCATAAGACA...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACGGGAGTACACCGCATTaGTGTTTGAGGATTCTAGGA +
Preference number: 5 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYGSTPH*CLRILG
Trigger: TCCTAGAATCCTCAAACACAAATGCGGTGTACTCCC...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp TGTGCGATGCAGCCCCTACTGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTTTCTGCAGAAAGCTATaGATAGAAGTCACCTCTTGT +
Preference number: 5 (lower is better)
Translates to: CAMQPLLLKPVHGSVLICFCRKL*IEVTSC
Trigger: ACAAGAGGTGACTTCTATCAATAGCTTTCTGCAGAA...ACAAATGAGCACGCTGCCATGTACTGGTTTGAGCAGTAGGGGCTGCATCGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAGGGCAGAGTTTGGCTTaGGGTGAACCTTGGGCGCCT +
Preference number: 5 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTGQSLA*GEPWAP
Trigger: AGGCGCCCAAGGTTCACCCAAAGCCAAACTCTGCCC...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGCCACGGGGGCAGAGTTaGGCTTTGGGTGAACCTTGG +
Preference number: 5 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVPRGQS*ALGEPW
Trigger: CCAAGGTTCACCCAAAGCCAAACTCTGCCCCCGTGG...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGGGGGAATATGGGATCTaGGGGAAGGAGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVGEYGI*GKELQG
Trigger: GCCCTGCAGCTCCTTCCCCAAGATCCCATATTCCCC...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGGGGAATATGGGATCTaGGGGAAGGAGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLGEYGI*GKELQG
Trigger: GCCCTGCAGCTCCTTCCCCAAGATCCCATATTCCCC...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGAAGGCTGGGCTTCTaGCAAGGTGGTGGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQRRLGF*QGGGGG
Trigger: GCCTCCCCCACCACCTTGCAAGAAGCCCAGCCTTCT...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTACCACCGGCTATGGATTaGAAGCCATACGTGTTTAAC +
Preference number: 5 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVPPAMD*KPYVFN
Trigger: GTTAAACACGTATGGCTTCAAATCCATAGCCGGTGG...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGTCTCAGACAGGAATCTaGCTACGGGTTCCAGCATTC +
Preference number: 5 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLSQTGI*LRVPAF
Trigger: GAATGCTGGAACCCGTAGCAAGATTCCTGTCTGAGA...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS-3UTR CAA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAAATAGTAGGCTTTGATTaGCTCACAGCGCATGCGCTT +
Preference number: 5 (lower is better)
Translates to: LYLVSGLRDSALLVYILQIVGFD*LTAHAL
Trigger: AAGCGCATGCGCTGTGAGCAAATCAAAGCCTACTAT...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCAATAGTAGGCTTTGATTaGCTCACAGCGCATGCGCTT +
Preference number: 5 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPIVGFD*LTAHAL
Trigger: AAGCGCATGCGCTGTGAGCAAATCAAAGCCTACTAT...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGAAGCACTTCTTTGTCATaGTGGTGGATAATCGCGTCC +
Preference number: 5 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRSTSLS*WWIIAS
Trigger: GGACGCGATTATCCACCACAATGACAAAGAAGTGCT...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACTCCTGGAGAAGGACATaGGCTCCAGCTAATACAAGA +
Preference number: 5 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNSWRRT*APANTR
Trigger: TCTTGTATTAGCTGGAGCCAATGTCCTTCTCCAGGA...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGGAGGTGTCTTATGATTaGTTTGCTGGCTTCAGACTT +
Preference number: 5 (lower is better)
Translates to: TAQNFPTADESTSMNKALEVSYD*FAGFRL
Trigger: AAGTCTGAAGCCAGCAAACAAATCATAAGACACCTC...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACATGGTAACTCCCTCTaGTACACATTCCACTTGCTC +
Preference number: 5 (lower is better)
Translates to: LYLVSGLRDSALLVYILQHGNSL*YTFHLL
Trigger: GAGCAAGTGGAATGTGTACAAGAGGGAGTTACCATG...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGCATGGTAACTCCCTCTaGTACACATTCCACTTGCTC +
Preference number: 5 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLHGNSL*YTFHLL
Trigger: GAGCAAGTGGAATGTGTACAAGAGGGAGTTACCATG...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACCAGTGGCTTATACCTaGACAGGAAATCCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTPVAYT*TGNPRR
Trigger: CCTTCTCGGATTTCCTGTCAAGGTATAAGCCACTGG...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCATGTAGGCACAAATCATaGAGTTGGTCAGCATGCCAG +
Preference number: 5 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPCRHKS*SWSACQ
Trigger: CTGGCATGCTGACCAACTCAATGATTTGTGCCTACA...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACTGCCTGGGTCCACTCTaGTCATCGGTTCTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHCLGPL*SSVLLL
Trigger: AAGCAAAAGAACCGATGACAAGAGTGGACCCAGGCA...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACATGCCTGGGTCCACTCTaGTCATCGGTTCTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTCLGPL*SSVLLL
Trigger: AAGCAAAAGAACCGATGACAAGAGTGGACCCAGGCA...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGGTGTTGGGGCTGCGCTaGGGCTTTCGAGGAGGAATC +
Preference number: 5 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQVLGLR*GFRGGI
Trigger: GATTCCTCCTCGAAAGCCCAAGCGCAGCCCCAACAC...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGGGCTGCACGGGGTACTaGAGGTTGGTCTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQGCTGY*RLVSRT
Trigger: AGTCCTGGAGACCAACCTCAAGTACCCCGTGCAGCC...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGGGCAGCCTTCTGTTGTaGCAGCCCGGAATCAGTAGG +
Preference number: 5 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVGSLLL*QPGISR
Trigger: CCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCC...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACGCTCAATTCATAGTTTaGCAAGGGGTGACACTGGCG +
Preference number: 5 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHAQFIV*QGVTLA
Trigger: CGCCAGTGTCACCCCTTGCAAAACTATGAATTGAGC...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 90 bp AACAGTTTACCTCAGGATGCACTATTGCATGGAGGCTCTGTTCCATaGTCCTGCAAAAAGCTTCAAACTCATTCTCATTCGGCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: NSLPQDALLHGGSVP*SCKKLQTHSHSAAG
Trigger: TCCAGCTGCCGAATGAGAATGAGTTTGAAGCTTTTTGCAGGATCATGGAACAGAGCCTCCATGCAATAGTGCATCCTGAGGTAAACTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS-3UTR CAA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACAATAGTAGGCTTTGATTaGCTCACAGCGCATGCGCTT +
Preference number: 5 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTIVGFD*LTAHAL
Trigger: AAGCGCATGCGCTGTGAGCAAATCAAAGCCTACTAT...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAAAGCCGAAGCACTTCTTaGTCATTGTGGTGGATAATC +
Preference number: 5 (lower is better)
Translates to: LYLVSGLRDSALLVYILQSRSTS*SLWWII
Trigger: GATTATCCACCACAATGACAAAGAAGTGCTTCGGCT...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTATCCTGGAGAAGGACATaGGCTCCAGCTAATACAAGA +
Preference number: 5 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLSWRRT*APANTR
Trigger: TCTTGTATTAGCTGGAGCCAATGTCCTTCTCCAGGA...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGAAACAAACTGTCTTGCTaGGCAATTGGTAACACCAGG +
Preference number: 5 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRNKLSC*AIGNTR
Trigger: CCTGGTGTTACCAATTGCCAAGCAAGACAGTTTGTT...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAAATGCACACGACATGTTaGAATCTGGAATCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: LYLVSGLRDSALLVYILQMHTTC*NLESSV
Trigger: CACACTGGATTCCAGATTCAAACATGTCGTGTGCAT...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGATGCACACGACATGTTaGAATCTGGAATCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLMHTTC*NLESSV
Trigger: CACACTGGATTCCAGATTCAAACATGTCGTGTGCAT...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGCCACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCTGCAGTTCAAAATACTaGATGAAGCAACTGGACAAA +
Preference number: 5 (lower is better)
Translates to: SHCSELSDSRRKHINEQGCSSKY*MKQLDK
Trigger: TTTGTCCAGTTGCTTCATCAAGTATTTTGAACTGCA...GCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAACACCGCATTTGTGTTaGAGGATTCTAGGAGACTTT +
Preference number: 5 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVTPHLC*RILGDF
Trigger: AAAGTCTCCTAGAATCCTCAAACACAAATGCGGTGT...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAGGGAGTACACCGCATTaGTGTTTGAGGATTCTAGGA +
Preference number: 5 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLGSTPH*CLRILG
Trigger: TCCTAGAATCCTCAAACACAAATGCGGTGTACTCCC...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTAACTGTCCCTGTGTCTTaGAAATGTCGAAGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLTVPVS*KCRSPC
Trigger: ACAGGGACTTCGACATTTCAAAGACACAGGGACAGT...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGGAAGGCAGCCTTCTGTaGTTGCAGCCCGGAATCAGT +
Preference number: 5 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVEGSLL*LQPGIS
Trigger: ACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACATGCATTATGGGAGGGTaGAGGATATACAGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTCIMGG*RIYSEG
Trigger: TCCCTCACTGTATATCCTCAACCCTCCCATAATGCA...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 90 bp ACAGAAGACCCTTGCTACAATAGTGTCAGTGTCAGTACACTGCACTaGACAGCAGCGAGAACGACGATTTTAAGAGCAGAAGAATTTACC +
Preference number: 5 (lower is better)
Translates to: TEDPCYNSVSVSTLH*TAARTTILRAEEFT
Trigger: GGTAAATTCTTCTGCTCTTAAAATCGTCGTTCTCGCTGCTGTTCAGTGCAGTGTACTGACACTGACACTATTGTAGCAAGGGTCTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375857.6
CDS GCA 90 bp CTTAAAGCCCTTACTCAGGTAACAGTTTACCTCAGGATGCACTATTaGATGGAGGCTCTGTTCCATGATCCTGCAAAAAGCTTCAAACTC +
Preference number: 5 (lower is better)
Translates to: LKALTQVTVYLRMHY*MEALFHDPAKSFKL
Trigger: GAGTTTGAAGCTTTTTGCAGGATCATGGAACAGAGCCTCCATGCAATAGTGCATCCTGAGGTAAACTGTTACCTGAGTAAGGGCTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS CCA 90 bp CCCCACCATGGTAATCCGTGGTCAATGAAGCATTTCTGCAATTTATaGCTAGGTGCTTTGCCTCTGTCAGAAAGCCTGAAACTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: PHHGNPWSMKHFCNL*LGALPLSESLKLEN
Trigger: ATTTTCAAGTTTCAGGCTTTCTGACAGAGGCAAAGCACCTAGCCATAAATTGCAGAAATGCTTCATTGACCACGGATTACCATGGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS-3UTR CAA 90 bp GACTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACCTGTTAACATACTCATaGGTCTCTGAAGCTTCATCT +
Preference number: 5 (lower is better)
Translates to: DCTWLVVSETQLCLCTFYLLTYS*VSEASS
Trigger: AGATGAAGCTTCAGAGACCAATGAGTATGTTAACAG...GTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAGTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp GGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGTGTGTTTGTCTGGCCATATTaGGCTGCCAAGTGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: GSTINRLLNRRKTTVQSVFVWPY*AAKWRG
Trigger: TCCCCTCCACTTGGCAGCCAAATATGGCCAGACAAA...CACACTCTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACCATGGAAGAATAAATaGGAAGCTCCTTGTATGGGT +
Preference number: 5 (lower is better)
Translates to: LYLVSGLRDSALLVYILQPWKNK*EAPCMG
Trigger: ACCCATACAAGGAGCTTCCAATTTATTCTTCCATGG...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp GAAGGCAGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTATGTCTTATGATTTGTTaGCTGGCTTCAGACTTTCCT +
Preference number: 5 (lower is better)
Translates to: EGSLLLLQPGISRQFYFVCLMIC*LASDFP
Trigger: AGGAAAGTCTGAAGCCAGCAAACAAATCATAAGACA...TACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCTGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTATCATTAAGTGTGGTCTaGGCATGTCCAAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLSLSVV*ACPKAS
Trigger: AGAAGCCTTTGGACATGCCAAGACCACACTTAATGA...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGACTCCAAGGTGCAATATaGCTGCTAGAATTACGAACA +
Preference number: 5 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRLQGAI*LLELRT
Trigger: TGTTCGTAATTCTAGCAGCAATATTGCACCTTGGAG...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCACTCCAAGGTGCAATATaGCTGCTAGAATTACGAACA +
Preference number: 5 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPLQGAI*LLELRT
Trigger: TGTTCGTAATTCTAGCAGCAATATTGCACCTTGGAG...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp AGCCTTCTGTTGTTGCAGCCCGGAATCAGTAGGCAGTTCTATTTTGTAAGTCTGGCTTTTCTGTTCATCTaGACTGTGGAGGCAAGAATT +
Preference number: 5 (lower is better)
Translates to: SLLLLQPGISRQFYFVSLAFLFI*TVEARI
Trigger: AATTCTTGCCTCCACAGTCAAGATGAACAGAAAAGC...CAGACTTACAAAATAGAACTGCCTACTGATTCCGGGCTGCAACAACAGAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCAGCTTTTCTGTTCATCTaGACTGTGGAGGCAAGAATT +
Preference number: 5 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPAFLFI*TVEARI
Trigger: AATTCTTGCCTCCACAGTCAAGATGAACAGAAAAGC...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAAACACCGCATTTGTGTTaGAGGATTCTAGGAGACTTT +
Preference number: 5 (lower is better)
Translates to: LYLVSGLRDSALLVYILQTPHLC*RILGDF
Trigger: AAAGTCTCCTAGAATCCTCAAACACAAATGCGGTGT...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGCACAAATCATTGAGTaGGTCAGCATGCCAGTATTT +
Preference number: 5 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNAQIIE*VSMPVF
Trigger: AAATACTGGCATGCTGACCAACTCAATGATTTGTGC...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TGCTCAAACCAGTACATGGCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATAGAAGTCACCTCTTGTaGTCTGATGCTTATTCTCTG +
Preference number: 5 (lower is better)
Translates to: CSNQYMAACSFVLCRPLNRSHLL*SDAYSL
Trigger: CAGAGAATAAGCATCAGACAACAAGAGGTGACTTCT...ATTCAAAGGCCTACACAGTACAAATGAGCACGCTGCCATGTACTGGTTTGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACTGCTCAGAACTTTCCGACAGCCGACGAAAGCACATCAATGAACAAGGCCTTGATTTGCATTTCTGTCTaGAGTCTCGGAAGTAATTTC +
Preference number: 5 (lower is better)
Translates to: TAQNFPTADESTSMNKALICISV*SLGSNF
Trigger: GAAATTACTTCCGAGACTCAAGACAGAAATGCAAAT...CAAGGCCTTGTTCATTGATGTGCTTTCGTCGGCTGTCGGAAAGTTCTGAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAGATCTGCTGCCAGTCTaGTCCTTCCTCACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTDLLPV*SFLTEL
Trigger: AAGCTCTGTGAGGAAGGACAAGACTGGCAGCAGATC...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTACCATGGAAGAATAAATaGGAAGCTCCTTGTATGGGT +
Preference number: 5 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLPWKNK*EAPCMG
Trigger: ACCCATACAAGGAGCTTCCAATTTATTCTTCCATGG...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACTGTCTTATGATTTGTTaGCTGGCTTCAGACTTTCCT +
Preference number: 5 (lower is better)
Translates to: CTWLVVSETQLCLCTFYNCLMIC*LASDFP
Trigger: AGGAAAGTCTGAAGCCAGCAAACAAATCATAAGACA...GTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGATGCAGTTCAAAATACTaGATGAAGCAACTGGACAAA +
Preference number: 5 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRCSSKY*MKQLDK
Trigger: TTTGTCCAGTTGCTTCATCAAGTATTTTGAACTGCA...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGAATGCCAATTCATCTGTaGATACTTGTAACATTCCAG +
Preference number: 5 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRMPIHL*ILVTFQ
Trigger: CTGGAATGTTACAAGTATCAACAGATGAATTGGCAT...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGATCACATCCATTTGTATaGTCTACAGCTGTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRSHPFV*STAVFH
Trigger: GTGAAAAACAGCTGTAGACAATACAAATGGATGTGA...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp CTGTACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAATACAGTCACATCCATTaGTATTGTCTACAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: LYLVSGLRDSALLVYILQYSHIH*YCLQLF
Trigger: AAACAGCTGTAGACAATACAAATGGATGTGACTGTA...TTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGTACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp ACCTGGTTAGTGGTCTCAGAGACTCAGCTCTGCTTGTGTACATTCTACAACAGATCAACTGGGAGCTTTTaGATGCTACGAAAATTGAAT +
Preference number: 5 (lower is better)
Translates to: TWLVVSETQLCLCTFYNRSTGSF*MLRKLN
Trigger: ATTCAATTTTCGTAGCATCAAAAAGCTCCCAGTTGA...TCTGTTGTAGAATGTACACAAGCAGAGCTGAGTCTCTGAGACCACTAACCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251041.10
CDS-3UTR CAA 90 bp TATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACACACACGATAGAAGTCACCTCTaGTTGTCTGATGCTTATTCT +
Preference number: 5 (lower is better)
Translates to: YHHEMDKKEPTHTHTNTHDRSHL*LSDAYS
Trigger: AGAATAAGCATCAGACAACAAGAGGTGACTTCTATC...GTGTGTGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GAGTGTATCACCACGAGATGGATAAGAAAGAACCCACACACACACACACAAACAGATAGAAGTCACCTCTaGTTGTCTGATGCTTATTCT +
Preference number: 5 (lower is better)
Translates to: ECITTRWIRKNPHTHTQTDRSHL*LSDAYS
Trigger: AGAATAAGCATCAGACAACAAGAGGTGACTTCTATC...TGTTTGTGTGTGTGTGTGTGGGTTCTTTCTTATCCATCTCGTGGTGATACACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CCCACACACACACACACAAACACACACACACACACACGGGATCTCATATATTTATTCTGCAGAAAGCTATaGATAGAAGTCACCTCTTGT +
Preference number: 5 (lower is better)
Translates to: PTHTHTNTHTHTRDLIYLFCRKL*IEVTSC
Trigger: ACAAGAGGTGACTTCTATCAATAGCTTTCTGCAGAA...TAAATATATGAGATCCCGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp CATTTTACACCACCGGCTATGGATTTGAAGCCATACGTGTTTAACCGTGTGCCAATTTGCATTTCTGTCTaGAGTCTCGGAAGTAATTTC +
Preference number: 5 (lower is better)
Translates to: HFTPPAMDLKPYVFNRVPICISV*SLGSNF
Trigger: GAAATTACTTCCGAGACTCAAGACAGAAATGCAAAT...TGGCACACGGTTAAACACGTATGGCTTCAAATCCATAGCCGGTGGTGTAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGGAGCCACTGCTCGAATTCCATGGTTATTaGCATTTCTGTCTTGAGTCT +
Preference number: 5 (lower is better)
Translates to: GMNKKFQVARQGGLEPLLEFHGY*HFCLES
Trigger: AGACTCAAGACAGAAATGCAAATAACCATGGAATTC...GAGCAGTGGCTCCAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACAACTGTCCCTGTGTCTTaGAAATGTCGAAGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTTVPVS*KCRSPC
Trigger: ACAGGGACTTCGACATTTCAAAGACACAGGGACAGT...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 90 bp AAGCTATTGATAGAAGTCACCTCTTGTTGTCTGATGCTTATTCTCTaGAGCAGGTGCTGGCGTGCTAAAAATCCTCTGATAACTTTTTGG +
Preference number: 5 (lower is better)
Translates to: KLLIEVTSCCLMLIL*SRCWRAKNPLITFW
Trigger: CCAAAAAGTTATCAGAGGATTTTTAGCACGCCAGCACCTGCTTCAGAGAATAAGCATCAGACAACAAGAGGTGACTTCTATCAATAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGCACTTCTTTGTCATaGTGGTGGATAATCGCGTCC +
Preference number: 5 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQSTSLS*WWIIAS
Trigger: GGACGCGATTATCCACCACAATGACAAAGAAGTGCT...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGTCCTGGAGAAGGACATaGGCTCCAGCTAATACAAGA +
Preference number: 5 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQSWRRT*APANTR
Trigger: TCTTGTATTAGCTGGAGCCAATGTCCTTCTCCAGGA...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGAACAAACTGTCTTGCTaGGCAATTGGTAACACCAGG +
Preference number: 5 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLNKLSC*AIGNTR
Trigger: CCTGGTGTTACCAATTGCCAAGCAAGACAGTTTGTT...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGTTGTACACATTCCACTaGCTCGTGGAGAAAAAGCAC +
Preference number: 5 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLLYTFH*LVEKKH
Trigger: GTGCTTTTTCTCCACGAGCAAGTGGAATGTGTACAA...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp GCAGCGTGCTCATTTGTACTGTGTAGGCCTTTGAATGAATATGATCATTTTACATTGTCATCGGTTCTTTaGCTTCCTTCCTCTTGCATG +
Preference number: 5 (lower is better)
Translates to: AACSFVLCRPLNEYDHFTLSSVL*LPSSCM
Trigger: CATGCAAGAGGAAGGAAGCAAAAGAACCGATGACAA...TGTAAAATGATCATATTCATTCAAAGGCCTACACAGTACAAATGAGCACGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 90 bp TCGGAATTTAAAGGAAGGATAGGCAGATACGAGGGATCCTGTTTGTaGCAATTTCGACTGGAACAAATGATTGATCACGACATTTTCACT +
Preference number: 5 (lower is better)
Translates to: SEFKGRIGRYEGSCL*QFRLEQMIDHDIFT
Trigger: AGTGAAAATGTCGTGATCAATCATTTGTTCCAGTCGAAATTGTCACAAACAGGATCCCTCGTATCTGCCTATCCTTCCTTTAAATTCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS TCA 90 bp TCCATGGTTATTTGCATTTCTGTCTTGAGTCTCGGAAGTAATTTCTaGCGTACTAGGGTCATCTCGGCTACTTATGTTCATGTTAGTTTC +
Preference number: 5 (lower is better)
Translates to: SMVICISVLSLGSNF*RTRVISATYVHVSF
Trigger: GAAACTAACATGAACATAAGTAGCCGAGATGACCCTAGTACGTCAGAAATTACTTCCGAGACTCAAGACAGAAATGCAAATAACCATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp TTTTCAAAGGCTGGTATGAATAAAAAGTTCCAAGTAGCAAGACAAGGTGGTCTGCTCCAAGGTGCAATATaGCTGCTAGAATTACGAACA +
Preference number: 5 (lower is better)
Translates to: FSKAGMNKKFQVARQGGLLQGAI*LLELRT
Trigger: TGTTCGTAATTCTAGCAGCAATATTGCACCTTGGAG...CAGACCACCTTGTCTTGCTACTTGGAACTTTTTATTCATACCAGCCTTTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGCCATGGAAGAATAAATaGGAAGCTCCTTGTATGGGT +
Preference number: 5 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQPWKNK*EAPCMG
Trigger: ACCCATACAAGGAGCTTCCAATTTATTCTTCCATGG...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGAGAAGTCACCTCTTGTaGTCTGATGCTTATTCTCTG +
Preference number: 5 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQRSHLL*SDAYSL
Trigger: CAGAGAATAAGCATCAGACAACAAGAGGTGACTTCT...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGCTGTTAACATACTCATaGGTCTCTGAAGCTTCATCT +
Preference number: 5 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQLLTYS*VSEASS
Trigger: AGATGAAGCTTCAGAGACCAATGAGTATGTTAACAG...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 90 bp GCAGATACGAGGGATCCTGTTTGTGACAATTTCGACTGGAACAAATaGTTGATCACGACATTTTCACTAGTTTTCATTACAAATAGAAGA +
Preference number: 5 (lower is better)
Translates to: ADTRDPVCDNFDWNK*LITTFSLVFITNRR
Trigger: TCTTCTATTTGTAATGAAAACTAGTGAAAATGTCGTGATCAATCATTTGTTCCAGTCGAAATTGTCACAAACAGGATCCCTCGTATCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS-3UTR CAA 90 bp ACCATTGGAAGTACAATAAACAGACTGTTGAACCGTAGAAAAACAACTGTACAGATGCCAATTCATCTGTaGATACTTGTAACATTCCAG +
Preference number: 5 (lower is better)
Translates to: TIGSTINRLLNRRKTTVQMPIHL*ILVTFQ
Trigger: CTGGAATGTTACAAGTATCAACAGATGAATTGGCAT...CTGTACAGTTGTTTTTCTACGGTTCAACAGTCTGTTTATTGTACTTCCAATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 72 bp TCGTCACCCGGAGGCGCCGCCGGGGGCAGCGCGCACTaGGGAGTCCCGGGGGTCAGAACGCGCGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SSPGGAAGGSAH*GVPGVRTRAAA
Trigger: GGCAGCAGCGCGCGTTCTGACCCCCGGGACTCCGCAGTGCGCGCTGCCCCCGGCGGCGCCTCCGGGTGACGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp GGGACGCGGGCCTGTCGCCGTCGCCCTTCTGGCTCTTaGAGTACTGCGGGGACAGCGGGCTCGACCCCTCCG +
Preference number: 6 (lower is better)
Translates to: GTRACRRRPSGS*STAGTAGSTPP
Trigger: CGGAGGGGTCGAGCCCGCTGTCCCCGCAGTACTCCAAGAGCCAGAAGGGCGACGGCGACAGGCCCGCGTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp AGGCCGGGGGACGCGGGCCTGTCGCCGTCGCCCTTCTaGCTCTTGGAGTACTGCGGGGACAGCGGGCTCGAC +
Preference number: 6 (lower is better)
Translates to: RPGDAGLSPSPF*LLEYCGDSGLD
Trigger: GTCGAGCCCGCTGTCCCCGCAGTACTCCAAGAGCCAGAAGGGCGACGGCGACAGGCCCGCGTCCCCCGGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 72 bp GGCCTGTCGCCGTCGCCCTTCTGGCTCTTGGAGTACTaGGGGGACAGCGGGCTCGACCCCTCCGGCTGCACG +
Preference number: 6 (lower is better)
Translates to: GLSPSPFWLLEY*GDSGLDPSGCT
Trigger: CGTGCAGCCGGAGGGGTCGAGCCCGCTGTCCCCGCAGTACTCCAAGAGCCAGAAGGGCGACGGCGACAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 72 bp CAGGGCCCGGCCACGGGGGCAGAGTTTGGCTTTGGGTaGACCTTGGGCGCCTCTGCGCTCGGCCCCGCTTTC +
Preference number: 6 (lower is better)
Translates to: QGPATGAEFGFG*TLGASALGPAF
Trigger: GAAAGCGGGGCCGAGCGCAGAGGCGCCCAAGGTTCACCCAAAGCCAAACTCTGCCCCCGTGGCCGGGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 72 bp GACTCCCCGGGGTCCGGGCTATCGGGCCTGGCCGCGTaGCCCAGCATCTCGATGTACACAGGCTCGCTGTCG +
Preference number: 6 (lower is better)
Translates to: DSPGSGLSGLAA*PSISMYTGSLS
Trigger: CGACAGCGAGCCTGTGTACATCGAGATGCTGGGGCACGCGGCCAGGCCCGATAGCCCGGACCCCGGGGAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp GTCTGGGCCGGGCCAGAGCTTCGTTGGCCGCTTCCCTaGCCGCGGAGAGGCAGGCGCTCACAGCCTCATAGG +
Preference number: 6 (lower is better)
Translates to: VWAGPELRWPLP*PRRGRRSQPHR
Trigger: CCTATGAGGCTGTGAGCGCCTGCCTCTCCGCGGCCAGGGAAGCGGCCAACGAAGCTCTGGCCCGGCCCAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp GAAGGAGCTGCAGGGCCCGGCCACGGGGGCAGAGTTTaGCTTTGGGTGAACCTTGGGCGCCTCTGCGCTCGG +
Preference number: 6 (lower is better)
Translates to: EGAAGPGHGGRV*LWVNLGRLCAR
Trigger: CCGAGCGCAGAGGCGCCCAAGGTTCACCCAAAGCCAAACTCTGCCCCCGTGGCCGGGCCCTGCAGCTCCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp GCGAGGCACTGGAGCCGGCCTTCCTGGCGTCCGCCCTaGTGGCCTTCACGGGGGAATATGGGATCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: ARHWSRPSWRPP*WPSRGNMGSWG
Trigger: TCCCCAAGATCCCATATTCCCCCGTGAAGGCCACCAGGGCGGACGCCAGGAAGGCCGGCTCCAGTGCCTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS TCA 72 bp GAGGCACTGGCCCAGGCCATCCACGGCCGCGCAGACTaGCATGGAGCTGGGGTGGAAATGCCTGGGTCCACT +
Preference number: 6 (lower is better)
Translates to: EALAQAIHGRAD*HGAGVEMPGST
Trigger: AGTGGACCCAGGCATTTCCACCCCAGCTCCATGTCAGTCTGCGCGGCCGTGGATGGCCTGGGCCAGTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp AGCGAAGGAGACCAGATGGACGGGCCAACGAGGCACTaGCCCAGGCCATCCACGGCCGCGCAGACTGACATG +
Preference number: 6 (lower is better)
Translates to: SEGDQMDGPTRH*PRPSTAAQTDM
Trigger: CATGTCAGTCTGCGCGGCCGTGGATGGCCTGGGCCAGTGCCTCGTTGGCCCGTCCATCTGGTCTCCTTCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp AGGCACTGGAGCCGGCCTTCCTGGCGTCCGCCCTGGTaGCCTTCACGGGGGAATATGGGATCTTGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: RHWSRPSWRPPW*PSRGNMGSWGR
Trigger: CCTTCCCCAAGATCCCATATTCCCCCGTGAAGGCCACCAGGGCGGACGCCAGGAAGGCCGGCTCCAGTGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp TGCCAGAGAGCCCCAGGTCTCCTTGTCACTGGCGTGTaGGAGACCCAGGGGCGCACGTCCCTGGGCGAGTTT +
Preference number: 6 (lower is better)
Translates to: CQRAPGLLVTGV*ETQGRTSLGEF
Trigger: AAACTCGCCCAGGGACGTGCGCCCCTGGGTCTCCCACACGCCAGTGACAAGGAGACCTGGGGCTCTCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS CCA 72 bp TGGTTCTTGCCAGAGAGCCCCAGGTCTCCTTGTCACTaGCGTGTGGGAGACCCAGGGGCGCACGTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: WFLPESPRSPCH*RVGDPGAHVPG
Trigger: CCCAGGGACGTGCGCCCCTGGGTCTCCCACACGCCAGTGACAAGGAGACCTGGGGCTCTCTGGCAAGAACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS GCA 72 bp CAGGGACCCTCCCGAGGAGACGAGGGTGTGGGGGTCTaGCCCCTCCTTCAGGAGCCGAAGCACTTCTTTGTC +
Preference number: 6 (lower is better)
Translates to: QGPSRGDEGVGV*PLLQEPKHFFV
Trigger: GACAAAGAAGTGCTTCGGCTCCTGAAGGAGGGGGCAGACCCCCACACCCTCGTCTCCTCGGGAGGGTCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp TGGGGCTGGGCCTCCGGAGGGTCCTCCTTTACCAGCTaGAACGGTGTTGGGTCTGTCAGTAGAGGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: WGWASGGSSFTS*NGVGSVSRGPW
Trigger: CCAGGGCCCTCTACTGACAGACCCAACACCGTTCCAGCTGGTAAAGGAGGACCCTCCGGAGGCCCAGCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS CCA 72 bp CGGCTTCTTCAGAAGGCTGGGCTTCTTGCAAGGTGGTaGGGGAGGCACCCTGGGCTCAGCGTGGTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: RLLQKAGLLARW*GRHPGLSVVQD
Trigger: ATCCTGCACCACGCTGAGCCCAGGGTGCCTCCCCCACCACCTTGCAAGAAGCCCAGCCTTCTGAAGAAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp TGTTGCAGGAGGCCCCTTCCGGCTTCTTCAGAAGGCTaGGCTTCTTGCAAGGTGGTGGGGGAGGCACCCTGG +
Preference number: 6 (lower is better)
Translates to: CCRRPLPASSEG*ASCKVVGEAPW
Trigger: CCAGGGTGCCTCCCCCACCACCTTGCAAGAAGCCCAGCCTTCTGAAGAAGCCGGAAGGGGCCTCCTGCAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp TCACTGGCGTGTGGGAGACCCAGGGGCGCACGTCCCTaGGCGAGTTTCCCTAGCAGCCCAATGGCAAGTTTC +
Preference number: 6 (lower is better)
Translates to: SLACGRPRGARP*ASFPSSPMASF
Trigger: GAAACTTGCCATTGGGCTGCTAGGGAAACTCGCCCAGGGACGTGCGCCCCTGGGTCTCCCACACGCCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS GCA 72 bp GGGAGGCTGCTGCTGTCATCCATGCTGAACACCGAGTaGAGCGAAGGAGACCAGATGGACGGGCCAACGAGG +
Preference number: 6 (lower is better)
Translates to: GRLLLSSMLNTE*SEGDQMDGPTR
Trigger: CCTCGTTGGCCCGTCCATCTGGTCTCCTTCGCTGCACTCGGTGTTCAGCATGGATGACAGCAGCAGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp TTGCAAGGTGGTGGGGGAGGCACCCTGGGCTCAGCGTaGTGCAGGATCTGCTGCCAGTCTTGTCCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: LQGGGGGTLGSA*CRICCQSCPSS
Trigger: TGAGGAAGGACAAGACTGGCAGCAGATCCTGCACCACGCTGAGCCCAGGGTGCCTCCCCCACCACCTTGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CAA 72 bp CTTCTTGTGGTTCTTGCCAGAGAGCCCCAGGTCTCCTaGTCACTGGCGTGTGGGAGACCCAGGGGCGCACGT +
Preference number: 6 (lower is better)
Translates to: LLVVLAREPQVS*SLACGRPRGAR
Trigger: ACGTGCGCCCCTGGGTCTCCCACACGCCAGTGACAAGGAGACCTGGGGCTCTCTGGCAAGAACCACAAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS CAA 72 bp CCTCCGGAGGGTCCTCCTTTACCAGCTGGAACGGTGTaGGGTCTGTCAGTAGAGGGCCCTGGAGGGACACAG +
Preference number: 6 (lower is better)
Translates to: PPEGPPLPAGTV*GLSVEGPGGTQ
Trigger: CTGTGTCCCTCCAGGGCCCTCTACTGACAGACCCAACACCGTTCCAGCTGGTAAAGGAGGACCCTCCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS GCA 72 bp AAATGGTGGTGTCCCAGAGCTCAGACGGCAGCCTGTTaGAGGAGGCCCCTTCCGGCTTCTTCAGAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: KWWCPRAQTAAC*RRPLPASSEGW
Trigger: CCAGCCTTCTGAAGAAGCCGGAAGGGGCCTCCTGCAACAGGCTGCCGTCTGAGCTCTGGGACACCACCATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp TGCTCACAGCGCATGCGCTTCACTAGACGCTGCCGTTaGCCAAGGGGAAGGGACTCTAGCAAGCACTGGTCG +
Preference number: 6 (lower is better)
Translates to: CSQRMRFTRRCR*PRGRDSSKHWS
Trigger: CGACCAGTGCTTGCTAGAGTCCCTTCCCCTTGGCCAACGGCAGCGTCTAGTGAAGCGCATGCGCTGTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS CAA 72 bp CAAATGGTGGTGTCCCAGAGCTCAGACGGCAGCCTGTaGCAGGAGGCCCCTTCCGGCTTCTTCAGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: QMVVSQSSDGSL*QEAPSGFFRRL
Trigger: CAGCCTTCTGAAGAAGCCGGAAGGGGCCTCCTGCAACAGGCTGCCGTCTGAGCTCTGGGACACCACCATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CAA 90 bp GGGAGGCACCCTGGGCTCAGCGTGGTGCAGGATCTGCTGCCAGTCTaGTCCTTCCTCACAGAGCTTTCTCCTCCAGTCCAAGAGTTCCTG +
Preference number: 6 (lower is better)
Translates to: GRHPGLSVVQDLLPV*SFLTELSPPVQEFL
Trigger: CAGGAACTCTTGGACTGGAGGAGAAAGCTCTGTGAGGAAGGACAAGACTGGCAGCAGATCCTGCACCACGCTGAGCCCAGGGTGCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CAA 90 bp AGGCCACATCAAATGGTGGTGTCCCAGAGCTCAGACGGCAGCCTGTaGCAGGAGGCCCCTTCCGGCTTCTTCAGAAGGCTGGGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: RPHQMVVSQSSDGSL*QEAPSGFFRRLGFL
Trigger: CAAGAAGCCCAGCCTTCTGAAGAAGCCGGAAGGGGCCTCCTGCAACAGGCTGCCGTCTGAGCTCTGGGACACCACCATTTGATGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp CCATCCACGGCCGCGCAGACTGACATGGAGCTGGGGTaGAAATGCCTGGGTCCACTCTTGTCATCGGTTCTT +
Preference number: 6 (lower is better)
Translates to: PSTAAQTDMELG*KCLGPLLSSVL
Trigger: AAGAACCGATGACAAGAGTGGACCCAGGCATTTCCACCCCAGCTCCATGTCAGTCTGCGCGGCCGTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CAA 72 bp CCTGGGCTCAGCGTGGTGCAGGATCTGCTGCCAGTCTaGTCCTTCCTCACAGAGCTTTCTCCTCCAGTCCAA +
Preference number: 6 (lower is better)
Translates to: PGLSVVQDLLPV*SFLTELSPPVQ
Trigger: TTGGACTGGAGGAGAAAGCTCTGTGAGGAAGGACAAGACTGGCAGCAGATCCTGCACCACGCTGAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CAA 72 bp AGGGACACAGCAGGAAGAAGGGGCTTCTTGTGGTTCTaGCCAGAGAGCCCCAGGTCTCCTTGTCACTGGCGT +
Preference number: 6 (lower is better)
Translates to: RDTAGRRGFLWF*PESPRSPCHWR
Trigger: ACGCCAGTGACAAGGAGACCTGGGGCTCTCTGGCAAGAACCACAAGAAGCCCCTTCTTCCTGCTGTGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS GCA 72 bp TTGATTTGCTCACAGCGCATGCGCTTCACTAGACGCTaGCGTTGGCCAAGGGGAAGGGACTCTAGCAAGCAC +
Preference number: 6 (lower is better)
Translates to: LICSQRMRFTRR*RWPRGRDSSKH
Trigger: GTGCTTGCTAGAGTCCCTTCCCCTTGGCCAACGGCAGCGTCTAGTGAAGCGCATGCGCTGTGAGCAAATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS CAA 90 bp GCCCTGCTGGCGCCAGCCCTGCAGGTGAGGTGTCTTATGATTTGTTaGCTGGCTTCAGACTTTCCTGATCCCCTTTCTCCACTGAGGATG +
Preference number: 6 (lower is better)
Translates to: ALLAPALQVRCLMIC*LASDFPDPLSPLRM
Trigger: CATCCTCAGTGGAGAAAGGGGATCAGGAAAGTCTGAAGCCAGCAAACAAATCATAAGACACCTCACCTGCAGGGCTGGCGCCAGCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
ENST00000482793.1
CDS CAA 90 bp TGTGCCCATCATCAATTAAGGATCAACTCCAGGTCGACCCATGTTTaGCTCTGTTTTCTTGATCCTGGGGCTGGGCCTCCGGAGGGTCCT +
Preference number: 6 (lower is better)
Translates to: CAHHQLRINSRSTHV*LCFLDPGAGPPEGP
Trigger: AGGACCCTCCGGAGGCCCAGCCCCAGGATCAAGAAAACAGAGCAAAACATGGGTCGACCTGGAGTTGATCCTTAATTGATGATGGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS TCA 72 bp ACACTGCTGGAGAACAAGTCGACATCGCTCGGCAGCTaGCTGTTCCTTCTTCTCACGCAGGAATGTATCAGC +
Preference number: 6 (lower is better)
Translates to: TLLENKSTSLGS*LFLLLTQECIS
Trigger: GCTGATACATTCCTGCGTGAGAAGAAGGAACAGTCAGCTGCCGAGCGATGTCGACTTGTTCTCCAGCAGTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 72 bp AGGACAATATCAGGGTTATCGCAGGCACAGGCAATGTaGATGGGCGTCCAGAAGTCTTCATCCTGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: RTISGLSQAQAM*MGVQKSSSWWL
Trigger: CAACCACCAGGATGAAGACTTCTGGACGCCCATGCACATTGCCTGTGCCTGCGATAACCCTGATATTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS CAA 72 bp GCGCCAGCCCTGCAGGTGAGGTGTCTTATGATTTGTTaGCTGGCTTCAGACTTTCCTGATCCCCTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: APALQVRCLMIC*LASDFPDPLSP
Trigger: TGGAGAAAGGGGATCAGGAAAGTCTGAAGCCAGCAAACAAATCATAAGACACCTCACCTGCAGGGCTGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
ENST00000482793.1
CDS TCA 72 bp GCTTCTGAAAAGCCTTCTCGCGCTCATAGTAGGCTTTaGTTTGCTCACAGCGCATGCGCTTCACTAGACGCT +
Preference number: 6 (lower is better)
Translates to: ASEKPSRAHSRL*FAHSACASLDA
Trigger: AGCGTCTAGTGAAGCGCATGCGCTGTGAGCAAATCAAAGCCTACTATGAGCGCGAGAAGGCTTTTCAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp TGCCGTTGGCCAAGGGGAAGGGACTCTAGCAAGCACTaGTCGATTTCCATCTCATGGGATCGAAAAACGTTA +
Preference number: 6 (lower is better)
Translates to: CRWPRGRDSSKH*SISISWDRKTL
Trigger: TAACGTTTTTCGATCCCATGAGATGGAAATCGACCAGTGCTTGCTAGAGTCCCTTCCCCTTGGCCAACGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp GATACTTGTAACATTCCAGCCACTTGTTCCAGGAGCTaGAGGTCAGAAACGAAGGCGGAGTTCCCCTCATTC +
Preference number: 6 (lower is better)
Translates to: DTCNIPATCSRS*RSETKAEFPSF
Trigger: GAATGAGGGGAACTCCGCCTTCGTTTCTGACCTCCAGCTCCTGGAACAAGTGGCTGGAATGTTACAAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp CATCAATTAAGGATCAACTCCAGGTCGACCCATGTTTaGCTCTGTTTTCTTGATCCTGGGGCTGGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: HQLRINSRSTHV*LCFLDPGAGPP
Trigger: CGGAGGCCCAGCCCCAGGATCAAGAAAACAGAGCAAAACATGGGTCGACCTGGAGTTGATCCTTAATTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS TCA 72 bp CCATATTTGGCTGCCAAGTGGAGGGGAGTCCAGTACTaGTCATCTACTATGTTGAGGTCTCCACCATGTTCC +
Preference number: 6 (lower is better)
Translates to: PYLAAKWRGVQY*SSTMLRSPPCS
Trigger: GGAACATGGTGGAGACCTCAACATAGTAGATGATCAGTACTGGACTCCCCTCCACTTGGCAGCCAAATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS GCA 72 bp CAATTTCTCCCTGTTCAGAGAACGCTCCCCTGTGGATaGATCATCCTGTATGGTCTGGTTCAAATACCGGTG +
Preference number: 6 (lower is better)
Translates to: QFLPVQRTLPCG*IILYGLVQIPV
Trigger: CACCGGTATTTGAACCAGACCATACAGGATGATGCATCCACAGGGGAGCGTTCTCTGAACAGGGAGAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CCA 72 bp CAGGCAATGTGCATGGGCGTCCAGAAGTCTTCATCCTaGTGGTTGACGTTGACTCCTCTGTCAATCAGAATT +
Preference number: 6 (lower is better)
Translates to: QAMCMGVQKSSS*WLTLTPLSIRI
Trigger: AATTCTGATTGACAGAGGAGTCAACGTCAACCACCAGGATGAAGACTTCTGGACGCCCATGCACATTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp CAGCCAATTTCTCCCTGTTCAGAGAACGCTCCCCTGTaGATGCATCATCCTGTATGGTCTGGTTCAAATACC +
Preference number: 6 (lower is better)
Translates to: QPISPCSENAPL*MHHPVWSGSNT
Trigger: GGTATTTGAACCAGACCATACAGGATGATGCATCCACAGGGGAGCGTTCTCTGAACAGGGAGAAATTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS GCA 72 bp GAGAAGTTTCACCAGATTTGTCTGGCCATATTTGGCTaGCAAGTGGAGGGGAGTCCAGTACTGATCATCTAC +
Preference number: 6 (lower is better)
Translates to: EKFHQICLAIFG*QVEGSPVLIIY
Trigger: GTAGATGATCAGTACTGGACTCCCCTCCACTTGGCAGCCAAATATGGCCAGACAAATCTGGTGAAACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CCA 72 bp GCAATGTGCATGGGCGTCCAGAAGTCTTCATCCTGGTaGTTGACGTTGACTCCTCTGTCAATCAGAATTTCT +
Preference number: 6 (lower is better)
Translates to: AMCMGVQKSSSW*LTLTPLSIRIS
Trigger: AGAAATTCTGATTGACAGAGGAGTCAACGTCAACCACCAGGATGAAGACTTCTGGACGCCCATGCACATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS CCA 72 bp GAAGGACATTGGCTCCAGCCCCACCATGGTAATCCGTaGTCAATGAAGCATTTCTGCAATTTATGGCTAGGT +
Preference number: 6 (lower is better)
Translates to: EGHWLQPHHGNP*SMKHFCNLWLG
Trigger: ACCTAGCCATAAATTGCAGAAATGCTTCATTGACCACGGATTACCATGGTGGGGCTGGAGCCAATGTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS CAA 90 bp GCAATGTGCATGGGCGTCCAGAAGTCTTCATCCTGGTGGTTGACGTaGACTCCTCTGTCAATCAGAATTTCTGCAATGAAGGCATTATCA +
Preference number: 6 (lower is better)
Translates to: AMCMGVQKSSSWWLT*TPLSIRISAMKALS
Trigger: TGATAATGCCTTCATTGCAGAAATTCTGATTGACAGAGGAGTCAACGTCAACCACCAGGATGAAGACTTCTGGACGCCCATGCACATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS TCA 72 bp TTCTCCTCATTACAGTTCACGAGGTGTGGGTTTGCCTaGTGCATCAGGAGAAGTTTCACCAGATTTGTCTGG +
Preference number: 6 (lower is better)
Translates to: FSSLQFTRCGFA*CIRRSFTRFVW
Trigger: CCAGACAAATCTGGTGAAACTTCTCCTGATGCATCAGGCAAACCCACACCTCGTGAACTGTAATGAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp ATGGGCGTCCAGAAGTCTTCATCCTGGTGGTTGACGTaGACTCCTCTGTCAATCAGAATTTCTGCAATGAAG +
Preference number: 6 (lower is better)
Translates to: MGVQKSSSWWLT*TPLSIRISAMK
Trigger: CTTCATTGCAGAAATTCTGATTGACAGAGGAGTCAACGTCAACCACCAGGATGAAGACTTCTGGACGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS TCA 72 bp CATACTCATTGGTCTCTGAAGCTTCATCTGGCGCAGTaGGGTCAAATCCACTCCATTTTCATCCAGATAGGT +
Preference number: 6 (lower is better)
Translates to: HTHWSLKLHLAQ*GQIHSIFIQIG
Trigger: ACCTATCTGGATGAAAATGGAGTGGATTTGACCTCACTGCGCCAGATGAAGCTTCAGAGACCAATGAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS TCA 72 bp CCTTGCTACAATAGTGTCAGTGTCAGTACACTGCACTaGACAGCAGCGAGAACGACGATTTTAAGAGCAGAA +
Preference number: 6 (lower is better)
Translates to: PCYNSVSVSTLH*TAARTTILRAE
Trigger: TTCTGCTCTTAAAATCGTCGTTCTCGCTGCTGTTCAGTGCAGTGTACTGACACTGACACTATTGTAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375857.6
CDS TCA 72 bp CCTCAGGATGCACTATTGCATGGAGGCTCTGTTCCATaGTCCTGCAAAAAGCTTCAAACTCATTCTCATTCG +
Preference number: 6 (lower is better)
Translates to: PQDALLHGGSVP*SCKKLQTHSHS
Trigger: CGAATGAGAATGAGTTTGAAGCTTTTTGCAGGATCATGGAACAGAGCCTCCATGCAATAGTGCATCCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS GCA 72 bp CCCTCATTCAGGGCAGTAAACCGAATGTCTCCAAGGTaGAATATTGCTGCTAGAATTACGAACAGATTCTCC +
Preference number: 6 (lower is better)
Translates to: PSFRAVNRMSPR*NIAARITNRFS
Trigger: GGAGAATCTGTTCGTAATTCTAGCAGCAATATTGCACCTTGGAGACATTCGGTTTACTGCCCTGAATGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS GCA 72 bp CTTACTCAGGTAACAGTTTACCTCAGGATGCACTATTaGATGGAGGCTCTGTTCCATGATCCTGCAAAAAGC +
Preference number: 6 (lower is better)
Translates to: LTQVTVYLRMHY*MEALFHDPAKS
Trigger: GCTTTTTGCAGGATCATGGAACAGAGCCTCCATGCAATAGTGCATCCTGAGGTAAACTGTTACCTGAGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457511.7
CDS CCA 72 bp TCAGAGAACGCTCCCCTGTGGATGCATCATCCTGTATaGTCTGGTTCAAATACCGGTGTGCACATAAATTAT +
Preference number: 6 (lower is better)
Translates to: SENAPLWMHHPV*SGSNTGVHINY
Trigger: ATAATTTATGTGCACACCGGTATTTGAACCAGACCATACAGGATGATGCATCCACAGGGGAGCGTTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp ACCAGGAGAATATGCTGTTTCCATGGTAACTCCCTCTaGTACACATTCCACTTGCTCGTGGAGAAAAAGCAC +
Preference number: 6 (lower is better)
Translates to: TRRICCFHGNSL*YTFHLLVEKKH
Trigger: GTGCTTTTTCTCCACGAGCAAGTGGAATGTGTACAAGAGGGAGTTACCATGGAAACAGCATATTCTCCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp GTTCTGCAGAAAGCTATTGATAGAAGTCACCTCTTGTaGTCTGATGCTTATTCTCTGAAGCAGGTGCTGGCG +
Preference number: 6 (lower is better)
Translates to: VLQKAIDRSHLL*SDAYSLKQVLA
Trigger: CGCCAGCACCTGCTTCAGAGAATAAGCATCAGACAACAAGAGGTGACTTCTATCAATAGCTTTCTGCAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CAA 72 bp GCGAGAACGACGATTTTAAGAGCAGAAGAATTTACCTaGACAGGAAATCCGAGAAGGAAAGGCGAACAGGGT +
Preference number: 6 (lower is better)
Translates to: ARTTILRAEEFT*TGNPRRKGEQG
Trigger: ACCCTGTTCGCCTTTCCTTCTCGGATTTCCTGTCAAGGTAAATTCTTCTGCTCTTAAAATCGTCGTTCTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375857.6
CDS CCA 72 bp GGTAATCCGTGGTCAATGAAGCATTTCTGCAATTTATaGCTAGGTGCTTTGCCTCTGTCAGAAAGCCTGAAA +
Preference number: 6 (lower is better)
Translates to: GNPWSMKHFCNL*LGALPLSESLK
Trigger: TTTCAGGCTTTCTGACAGAGGCAAAGCACCTAGCCATAAATTGCAGAAATGCTTCATTGACCACGGATTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS CAA 72 bp TCCCATTCCCATCCTTCATGGGGGAGTACACCGCATTaGTGTTTGAGGATTCTAGGAGACTTTGTAGTTTTT +
Preference number: 6 (lower is better)
Translates to: SHSHPSWGSTPH*CLRILGDFVVF
Trigger: AAAAACTACAAAGTCTCCTAGAATCCTCAAACACAAATGCGGTGTACTCCCCCATGAAGGATGGGAATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS TCA 72 bp AAAGGAAGGATAGGCAGATACGAGGGATCCTGTTTGTaGCAATTTCGACTGGAACAAATGATTGATCACGAC +
Preference number: 6 (lower is better)
Translates to: KGRIGRYEGSCL*QFRLEQMIDHD
Trigger: GTCGTGATCAATCATTTGTTCCAGTCGAAATTGTCACAAACAGGATCCCTCGTATCTGCCTATCCTTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp TTGATGAAGCAACTGGACAAATCATTAAGTGTGGTCTaGGCATGTCCAAAGGCTTCTAAGATGCACACGACA +
Preference number: 6 (lower is better)
Translates to: LMKQLDKSLSVV*ACPKASKMHTT
Trigger: TGTCGTGTGCATCTTAGAAGCCTTTGGACATGCCAAGACCACACTTAATGATTTGTCCAGTTGCTTCATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp TGTGTTCTGCAGAAAGCTATTGATAGAAGTCACCTCTaGTTGTCTGATGCTTATTCTCTGAAGCAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: CVLQKAIDRSHL*LSDAYSLKQVL
Trigger: CAGCACCTGCTTCAGAGAATAAGCATCAGACAACAAGAGGTGACTTCTATCAATAGCTTTCTGCAGAACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CAA 72 bp TTCAGCCCCATGTCCTCTGTGTTCTGCAGAAAGCTATaGATAGAAGTCACCTCTTGTTGTCTGATGCTTATT +
Preference number: 6 (lower is better)
Translates to: FSPMSSVFCRKL*IEVTSCCLMLI
Trigger: AATAAGCATCAGACAACAAGAGGTGACTTCTATCAATAGCTTTCTGCAGAACACAGAGGACATGGGGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS CAA 90 bp CCGGTTAGCTGTTGTTTCCTCTCACAGAACTGCAGTTCAAAATACTaGATGAAGCAACTGGACAAATCATTAAGTGTGGTCTTGGCATGT +
Preference number: 6 (lower is better)
Translates to: PVSCCFLSQNCSSKY*MKQLDKSLSVVLAC
Trigger: ACATGCCAAGACCACACTTAATGATTTGTCCAGTTGCTTCATCAAGTATTTTGAACTGCAGTTCTGTGAGAGGAAACAACAGCTAACCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 90 bp ATTCTGGTTACCAGGAGAATATGCTGTTTCCATGGTAACTCCCTCTaGTACACATTCCACTTGCTCGTGGAGAAAAAGCACTTCATTGAT +
Preference number: 6 (lower is better)
Translates to: ILVTRRICCFHGNSL*YTFHLLVEKKHFID
Trigger: ATCAATGAAGTGCTTTTTCTCCACGAGCAAGTGGAATGTGTACAAGAGGGAGTTACCATGGAAACAGCATATTCTCCTGGTAACCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp TTGAACATAATGTCTTTTTCCAACAAACTGTCTTGCTaGGCAATTGGTAACACCAGGGGACTGAGCTTACTC +
Preference number: 6 (lower is better)
Translates to: LNIMSFSNKLSC*AIGNTRGLSLL
Trigger: GAGTAAGCTCAGTCCCCTGGTGTTACCAATTGCCAAGCAAGACAGTTTGTTGGAAAAAGACATTATGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp TGTTTCCATGGTAACTCCCTCTTGTACACATTCCACTaGCTCGTGGAGAAAAAGCACTTCATTGATATAGTG +
Preference number: 6 (lower is better)
Translates to: CFHGNSLLYTFH*LVEKKHFIDIV
Trigger: CACTATATCAATGAAGTGCTTTTTCTCCACGAGCAAGTGGAATGTGTACAAGAGGGAGTTACCATGGAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp GTGGTAGGCTGGATTTGGCTGGCCCATGAGTGTAGTTaGCCAACCACTGATCTAAATAATATTTTGTTCATA +
Preference number: 6 (lower is better)
Translates to: VVGWIWLAHECS*PTTDLNNILFI
Trigger: TATGAACAAAATATTATTTAGATCAGTGGTTGGCAAACTACACTCATGGGCCAGCCAAATCCAGCCTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375857.6
CDS CAA 90 bp GCACACGCCATGTGTAACAGGGTTACTCCTTCATCGTTTTTCTCATaGACATTTCCTCCAGATGATAAGAAGTGTTTGACATCTGTTAAC +
Preference number: 6 (lower is better)
Translates to: AHAMCNRVTPSSFFS*TFPPDDKKCLTSVN
Trigger: GTTAACAGATGTCAAACACTTCTTATCATCTGGAGGAAATGTCAATGAGAAAAACGATGAAGGAGTAACCCTGTTACACATGGCGTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000457511.7
CDS CAA 90 bp AGAATATGCTGTTTCCATGGTAACTCCCTCTTGTACACATTCCACTaGCTCGTGGAGAAAAAGCACTTCATTGATATAGTGGTGCATCTT +
Preference number: 6 (lower is better)
Translates to: RICCFHGNSLLYTFH*LVEKKHFIDIVVHL
Trigger: AAGATGCACCACTATATCAATGAAGTGCTTTTTCTCCACGAGCAAGTGGAATGTGTACAAGAGGGAGTTACCATGGAAACAGCATATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS TCA 72 bp ATTTGCATTTCTGTCTTGAGTCTCGGAAGTAATTTCTaGCGTACTAGGGTCATCTCGGCTACTTATGTTCAT +
Preference number: 6 (lower is better)
Translates to: ICISVLSLGSNF*RTRVISATYVH
Trigger: ATGAACATAAGTAGCCGAGATGACCCTAGTACGTCAGAAATTACTTCCGAGACTCAAGACAGAAATGCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7
CDS GCA 72 bp TCTTTGAACATAATGTCTTTTTCCAACAAACTGTCTTaGTTGGCAATTGGTAACACCAGGGGACTGAGCTTA +
Preference number: 6 (lower is better)
Translates to: SLNIMSFSNKLS*LAIGNTRGLSL
Trigger: TAAGCTCAGTCCCCTGGTGTTACCAATTGCCAAGCAAGACAGTTTGTTGGAAAAAGACATTATGTTCAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp GAATATCAGTTGTTAAGGCAGATGCCAATTCATCTGTaGATACTTGTAACATTCCAGCCACTTGTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: EYQLLRQMPIHL*ILVTFQPLVPG
Trigger: TCCTGGAACAAGTGGCTGGAATGTTACAAGTATCAACAGATGAATTGGCATCTGCCTTAACAACTGATATTC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp TCCAATATCCAATGTCTGCATGCTTTTCTGTTCATCTaGACTGTGGAGGCAAGAATTCATGGTATTCACCAA +
Preference number: 6 (lower is better)
Translates to: SNIQCLHAFLFI*TVEARIHGIHQ
Trigger: TTGGTGAATACCATGAATTCTTGCCTCCACAGTCAAGATGAACAGAAAAGCATGCAGACATTGGATATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 90 bp TCAAAATACTTGATGAAGCAACTGGACAAATCATTAAGTGTGGTCTaGGCATGTCCAAAGGCTTCTAAGATGCACACGACATGTTTGAAT +
Preference number: 6 (lower is better)
Translates to: SKYLMKQLDKSLSVV*ACPKASKMHTTCLN
Trigger: ATTCAAACATGTCGTGTGCATCTTAGAAGCCTTTGGACATGCCAAGACCACACTTAATGATTTGTCCAGTTGCTTCATCAAGTATTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251041.10
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS TCA 72 bp AGACACGTAAAAATTATCAAAAGTATCTGGCAGCTTTaGGTTATTGGGCCTGATGCAATGAATGAAGTGTGG +
Preference number: 6 (lower is better)
Translates to: RHVKIIKSIWQL*VIGPDAMNEVW
Trigger: CCACACTTCATTCATTGCATCAGGCCCAATAACTCAAAGCTGCCAGATACTTTTGATAATTTTTACGTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 90 bp AATCCGTGGTCAATGAAGCATTTCTGCAATTTATGGCTAGGTGCTTaGCCTCTGTCAGAAAGCCTGAAACTTGAAAATGAAATAAATGAT +
Preference number: 6 (lower is better)
Translates to: NPWSMKHFCNLWLGA*PLSESLKLENEIND
Trigger: ATCATTTATTTCATTTTCAAGTTTCAGGCTTTCTGACAGAGGCAAAGCACCTAGCCATAAATTGCAGAAATGCTTCATTGACCACGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467639.1
CDS TCA 72 bp AGGGATCCTGTTTGTGACAATTTCGACTGGAACAAATaGTTGATCACGACATTTTCACTAGTTTTCATTACA +
Preference number: 6 (lower is better)
Translates to: RDPVCDNFDWNK*LITTFSLVFIT
Trigger: TGTAATGAAAACTAGTGAAAATGTCGTGATCAATCATTTGTTCCAGTCGAAATTGTCACAAACAGGATCCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356711.7
ENST00000375857.6
ENST00000457511.7
CDS CAA 72 bp GTTATAATTTTTCTCTGCAACTGTAGGCACAAATCATaGAGTTGGTCAGCATGCCAGTATTTTAGAAACACT +
Preference number: 6 (lower is better)
Translates to: VIIFLCNCRHKS*SWSACQYFRNT
Trigger: AGTGTTTCTAAAATACTGGCATGCTGACCAACTCAATGATTTGTGCCTACAGTTGCAGAGAAAAATTATAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356711.7
ENST00000457511.7