RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYNN (Homo sapiens)

Ensembl gene IDs: ENSG00000085274

Ensembl transcript IDs: ENST00000349841.10, ENST00000356716.8, ENST00000544106.5, ENST00000602751.5

Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTCTGAAAACACTTTCCCACATGTGTTACACATTGGCTTGGCCTTaGAATACCTCTGATCCAGCTCTTCCCCGGAGTTCTCCGCCTCAT +
Preference number: 1 (lower is better)
Translates to: LLKTLSHMCYTLAWP*NTSDPALPRSSPPH
Trigger: ATGAGGCGGAGAACTCCGGGGAAGAGCTGGATCAGAGGTATTCCAAGGCCAAGCCAATGTGTAACACATGTGGGAAAGTGTTTTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR TCA 90 bp GCTTTTCTCCAGTATGCCTACGGACATGATAGGTCAGTGTGCTGGCTTGAGCAAGGTTTTTCTTCACCATaGTGCATGCGACTATGGAAG +
Preference number: 2 (lower is better)
Translates to: AFLQYAYGHDRSVCWLEQGFSSP*CMRLWK
Trigger: CTTCCATAGTCGCATGCATCATGGTGAAGAAAAACC...TTGCTCAAGCCAGCACACTGACCTATCATGTCCGTAGGCATACTGGAGAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR TCA 90 bp GCTTTTCTCCAGTATGCCTACGGACATGATAGGTCAGTGTGCTGGCTTGAGCAATCAAACCAAAAGTGCTaGCCATTGGTTTTCTCCAGA +
Preference number: 2 (lower is better)
Translates to: AFLQYAYGHDRSVCWLEQSNQKC*PLVFSR
Trigger: TCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGA...TTGCTCAAGCCAGCACACTGACCTATCATGTCCGTAGGCATACTGGAGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR GCA 90 bp GCTTTTCTCCAGTATGCCTACGGACATGATAGGTCAGTGTGCTGGCTTGAGCAATCCACTATGCTTCCTTaGATGAATCTTGAGATTGCT +
Preference number: 2 (lower is better)
Translates to: AFLQYAYGHDRSVCWLEQSTMLP*MNLEIA
Trigger: AGCAATCTCAAGATTCATGCAAGGAAGCATAGTGGA...TTGCTCAAGCCAGCACACTGACCTATCATGTCCGTAGGCATACTGGAGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGCAAACATTGCAGTTGTaGTGCAGCATCAGGTGCTTT +
Preference number: 2 (lower is better)
Translates to: IDPWGLQIATHSWADTIVQTLQL*CSIRCF
Trigger: AAAGCACCTGATGCTGCATCACAACTGCAATGTTTG...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACGATGTCATCTCACACTaGACAACAGCCTTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYDVISH*TTALWG
Trigger: CCCCCACAAGGCTGTTGTTCAGTGTGAGATGACATC...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR-3UTR CCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGACATTGGCTTGGCCTTaGAATACCTCTGATCCAGCT +
Preference number: 2 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLTLAWP*NTSDPA
Trigger: AGCTGGATCAGAGGTATTCCAAGGCCAAGCCAATGT...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTCAAACATTGCAGTTGTaGTGCAGCATCAGGTGCTTT +
Preference number: 2 (lower is better)
Translates to: QITQTKSADHWFSPEYSVQTLQL*CSIRCF
Trigger: AAAGCACCTGATGCTGCATCACAACTGCAATGTTTG...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACCAAACATTGCAGTTGTaGTGCAGCATCAGGTGCTTT +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYQTLQL*CSIRCF
Trigger: AAAGCACCTGATGCTGCATCACAACTGCAATGTTTG...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR TCA 90 bp ACCTGTATGTTTTCGAGAATGAGTGATAAGAGAACTAGAGACAGCAAATGCCTTCAAACATTGCAGTTGTaGTGCAGCATCAGGTGCTTT +
Preference number: 2 (lower is better)
Translates to: TCMFSRMSDKRTRDSKCLQTLQL*CSIRCF
Trigger: AAAGCACCTGATGCTGCATCACAACTGCAATGTTTG...AAGGCATTTGCTGTCTCTAGTTCTCTTATCACTCATTCTCGAAAACATACAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTAACACACTCTTGGGCTaGTACTATCGTGGATTTTGC +
Preference number: 2 (lower is better)
Translates to: QITQTKSADHWFSPEYSVNTLLG*YYRGFC
Trigger: GCAAAATCCACGATAGTATCAGCCCAAGAGTGTGTT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR GCA 90 bp ACCTGTATGTTTTCGAGAATGAGTGATAAGAGAACTAGAGACAGCAAATGCCTTCTTCACCATGATGCATaGGACTATGGAAGACTAGCT +
Preference number: 2 (lower is better)
Translates to: TCMFSRMSDKRTRDSKCLLHHDA*DYGRLA
Trigger: AGCTAGTCTTCCATAGTCGCATGCATCATGGTGAAG...AAGGCATTTGCTGTCTCTAGTTCTCTTATCACTCATTCTCGAAAACATACAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR GCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGACTAGAGACAGCAAATaGCTTCCCACAGGTATCACA +
Preference number: 2 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLTRDSK*LPTGIT
Trigger: TGTGATACCTGTGGGAAGGCATTTGCTGTCTCTAGT...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR TCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGCTGTTTTCGGGGAGTTaGAAGCCTTCTTCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLLFSGS*KPSSSF
Trigger: AAAAGAAGAAGAAGGCTTTCAACTCCCCGAAAACAG...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTGGCAGACGTAAGGTTTaGCTCCTTTATGTATTCTCA +
Preference number: 2 (lower is better)
Translates to: QITQTKSADHWFSPEYSVGRRKV*LLYVFS
Trigger: TGAGAATACATAAAGGAGTCAAACCTTACGTCTGCC...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR GCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGTGTGCCTTCTCAAACTaGTGGCTTCTGAAAACACTT +
Preference number: 2 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLCAFSN*WLLKTL
Trigger: AAGTGTTTTCAGAAGCCAGCAGTTTGAGAAGGCACA...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR CCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGTTAAAAAGCTCTCTGTaGAGTATAGACATAAAGCCA +
Preference number: 2 (lower is better)
Translates to: IDPWGLQIATHSWADTIVLKSSL*SIDIKP
Trigger: TGGCTTTATGTCTATACTCCACAGAGAGCTTTTTAA...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR CCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTATAGCAACACACTCTTaGGCTGATACTATCGTGGAT +
Preference number: 2 (lower is better)
Translates to: QITQTKSADHWFSPEYSVIATHS*ADTIVD
Trigger: ATCCACGATAGTATCAGCCCAAGAGTGTGTTGCTAT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACGCCCTTATAGAATTATaGCGTCACTGTAGCAGTTTT +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYALIEL*RHCSSF
Trigger: AAAACTGCTACAGTGACGTCATAATTCTATAAGGGC...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACCTATGCTTCCTTGCATaGATCTTGAGATTGCTAGAA +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYLCFLA*ILRLLE
Trigger: TTCTAGCAATCTCAAGATTCATGCAAGGAAGCATAG...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR GCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACCATGGGGATGAGTGGTaGAAATATCAGGATAATAAC +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYHGDEW*KYQDNN
Trigger: GTTATTATCCTGATATTTGCACCACTCATCCCCATG...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR-3UTR GCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTTCACTGTAACAGTGTaGACAATATCTTGTGCTGGA +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYFTVTV*TISCAG
Trigger: TCCAGCACAAGATATTGTGCACACTGTTACAGTGAA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR GCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGTTATGTATTCTCATGTaGCTTCTCAAACTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLLCILM*LLKLLA
Trigger: AGCCAGCAGTTTGAGAAGGCACATGAGAATACATAA...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR GCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTACTATCGTGGATTTTaGTTAAATTATGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYYYRGF*LNYEGR
Trigger: CCTGCCCTCATAATTTAAGCAAAATCCACGATAGTA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTTACTATCGTGGATTTTaGTTAAATTATGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: QITQTKSADHWFSPEYSVYYRGF*LNYEGR
Trigger: CCTGCCCTCATAATTTAAGCAAAATCCACGATAGTA...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR GCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACGCCTTGTTTAGGATTTaGCTGAATCAAATCTGTAGA +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYALFRI*LNQICR
Trigger: TCTACAGATTTGATTCAGGCAAATCCTAAACAAGGC...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR CCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACAAAAGTGCTGACCATTaGTTTTCTCCAGAATACTCA +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYKSADH*FSPEYS
Trigger: TGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTT...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR CCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACCCCATGTCCCACCAGTaGCAATTTATTATGAAAATA +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYPMSHQ*QFIMKI
Trigger: TATTTTCATAATAAATTGCCACTGGTGGGACATGGG...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR-3UTR TCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCATCTAATTGGTTCTTATaGCTTGGGTCCCAAATAGAG +
Preference number: 2 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPSNWFL*LGSQIE
Trigger: CTCTATTTGGGACCCAAGTCATAAGAACCAATTAGA...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR-3UTR CCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTTTAAAAAGCTCTCTGTaGAGTATAGACATAAAGCCA +
Preference number: 2 (lower is better)
Translates to: QITQTKSADHWFSPEYSVLKSSL*SIDIKP
Trigger: TGGCTTTATGTCTATACTCCACAGAGAGCTTTTTAA...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR CCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTTAAAAAGCTCTCTGTaGAGTATAGACATAAAGCCA +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYLKSSL*SIDIKP
Trigger: TGGCTTTATGTCTATACTCCACAGAGAGCTTTTTAA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR CCA 90 bp ACCTGTATGTTTTCGAGAATGAGTGATAAGAGAACTAGAGACAGCAAATGCCTTTTAAAAAGCTCTCTGTaGAGTATAGACATAAAGCCA +
Preference number: 2 (lower is better)
Translates to: TCMFSRMSDKRTRDSKCLLKSSL*SIDIKP
Trigger: TGGCTTTATGTCTATACTCCACAGAGAGCTTTTTAA...AAGGCATTTGCTGTCTCTAGTTCTCTTATCACTCATTCTCGAAAACATACAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR CCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTTTATGTATTGATCCATaGGGCTTACAAATAGCAACA +
Preference number: 2 (lower is better)
Translates to: QITQTKSADHWFSPEYSVLCIDP*GLQIAT
Trigger: TGTTGCTATTTGTAAGCCCCATGGATCAATACATAA...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR CCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTTATGTATTGATCCATaGGGCTTACAAATAGCAACA +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYLCIDP*GLQIAT
Trigger: TGTTGCTATTTGTAAGCCCCATGGATCAATACATAA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR CCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTTGGTTCTTATGACTTaGGTCCCAAATAGAGAAAAT +
Preference number: 2 (lower is better)
Translates to: QSQITQTKSADHWFSPEYLVLMT*VPNREN
Trigger: ATTTTCTCTATTTGGGACCCAAGTCATAAGAACCAA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR-3UTR TCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCACCAAAGATCAGGCAGTaGAATAAATTAATATGTGGG +
Preference number: 2 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPPKIRQ*NKLICG
Trigger: CCCACATATTAATTTATTTCACTGCCTGATCTTTGG...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR-3UTR CCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAAAAAGTGCTGACCATTaGTTTTCTCCAGAATACTCA +
Preference number: 2 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPKSADH*FSPEYS
Trigger: TGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTT...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR-3UTR CCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCATTATGTATTGATCCATaGGGCTTACAAATAGCAACA +
Preference number: 2 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPLCIDP*GLQIAT
Trigger: TGTTGCTATTTGTAAGCCCCATGGATCAATACATAA...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR-3UTR CCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCATTGGTTCTTATGACTTaGGTCCCAAATAGAGAAAAT +
Preference number: 2 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPLVLMT*VPNREN
Trigger: ATTTTCTCTATTTGGGACCCAAGTCATAAGAACCAA...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR TCA 72 bp GGGCTTCCCCAGCATATATATGCCCTGGGAACTGTCTaGTTCAATAGGTGGGGTGGGCCTGGATATTGTTAT +
Preference number: 3 (lower is better)
Translates to: GLPQHIYALGTV*FNRWGGPGYCY
Trigger: ATAACAATATCCAGGCCCACCCCACCTATTGAATCAGACAGTTCCCAGGGCATATATATGCTGGGGAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR CCA 72 bp ACACTTTCCCACATGTGTTACACATTGGCTTGGCCTTaGAATACCTCTGATCCAGCTCTTCCCCGGAGTTCT +
Preference number: 3 (lower is better)
Translates to: TLSHMCYTLAWP*NTSDPALPRSS
Trigger: AGAACTCCGGGGAAGAGCTGGATCAGAGGTATTCCAAGGCCAAGCCAATGTGTAACACATGTGGGAAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR GCA 72 bp TTTCTCCAGTATGCCTACGGACATGATAGGTCAGTGTaGTGGCTTGAGCAAATCTCTGTCCACACCTATCAC +
Preference number: 3 (lower is better)
Translates to: FLQYAYGHDRSV*WLEQISVHTYH
Trigger: GTGATAGGTGTGGACAGAGATTTGCTCAAGCCAGCACACTGACCTATCATGTCCGTAGGCATACTGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR TCA 72 bp TCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTaGTACTATCGTGGATTTTGCTTAAATTATGAGGGC +
Preference number: 3 (lower is better)
Translates to: SMGLTNSNTLLG*YYRGFCLNYEG
Trigger: GCCCTCATAATTTAAGCAAAATCCACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR CAA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGCCTGTTTTCGGGGAGTaGAAAGCCTTCTTCTTCTTT +
Preference number: 3 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLPVFGE*KAFFFF
Trigger: AAAGAAGAAGAAGGCTTTCAACTCCCCGAAAACAGG...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR CAA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTAGTGTGCACAATATCTaGTGCTGGAAAAGTATTTTC +
Preference number: 3 (lower is better)
Translates to: HSLCIDPWGLQIATHSWASVHNI*CWKSIF
Trigger: GAAAATACTTTTCCAGCACAAGATATTGTGCACACT...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602751.5
3UTR-3UTR CAA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTGCATAGTTTATGTATaGATCCATGGGGCTTACAAA +
Preference number: 3 (lower is better)
Translates to: QSQITQTKSADHWFSPEYCIVYV*IHGAYK
Trigger: TTTGTAAGCCCCATGGATCAATACATAAACTATGCA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR CAA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTTGCATAGTTTATGTATaGATCCATGGGGCTTACAAA +
Preference number: 3 (lower is better)
Translates to: QITQTKSADHWFSPEYSVCIVYV*IHGAYK
Trigger: TTTGTAAGCCCCATGGATCAATACATAAACTATGCA...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR-3UTR CAA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACAATACCAGAGGAAATTaGGCAACTATTGCCCTTATA +
Preference number: 3 (lower is better)
Translates to: QSQITQTKSADHWFSPEYNTRGN*ATIALI
Trigger: TATAAGGGCAATAGTTGCCAAATTTCCTCTGGTATT...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
3UTR CCA 72 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTaGTTTTCTCCAGAATACTCAGTTCTAAATGAACAA +
Preference number: 3 (lower is better)
Translates to: QSQITQTKSADH*FSPEYSVLNEQ
Trigger: TTGTTCATTTAGAACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
3UTR TCA 72 bp GAATATATGCACCTTACCAGAGATGTTTGCTACCAATaGTATCTTAGCAATTCCATATTCCTTACAAAGTCA +
Preference number: 3 (lower is better)
Translates to: EYMHLTRDVCYQ*YLSNSIFLTKS
Trigger: TGACTTTGTAAGGAATATGGAATTGCTAAGATATCATTGGTAGCAAACATCTCTGGTAAGGTGCATATATTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp GCTTTTCTCCAGTATGCCTACGGACATGATAGGTCAGTGTGCTGGCTTGAGCAAGAGACTGAGTATCCGTaGCAGGCAGAAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: AFLQYAYGHDRSVCWLEQETEYP*QAEACD
Trigger: ATCACATGCTTCTGCCTGTCACGGATACTCAGTCTC...TTGCTCAAGCCAGCACACTGACCTATCATGTCCGTAGGCATACTGGAGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGGCCCTGGGAACTGTCTaGTTCAATAGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVALGTV*FNRWGG
Trigger: CCCACCCCACCTATTGAATCAGACAGTTCCCAGGGC...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR GCA 90 bp GCTTTTCTCCAGTATGCCTACGGACATGATAGGTCAGTGTGCTGGCTTGAGCAACTTCACCATGATGCATaGGACTATGGAAGACTAGCT +
Preference number: 4 (lower is better)
Translates to: AFLQYAYGHDRSVCWLEQLHHDA*DYGRLA
Trigger: AGCTAGTCTTCCATAGTCGCATGCATCATGGTGAAG...TTGCTCAAGCCAGCACACTGACCTATCATGTCCGTAGGCATACTGGAGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR GCA 90 bp GCTTTTCTCCAGTATGCCTACGGACATGATAGGTCAGTGTGCTGGCTTGAGCAAACTAGAGACAGCAAATaGCTTCCCACAGGTATCACA +
Preference number: 4 (lower is better)
Translates to: AFLQYAYGHDRSVCWLEQTRDSK*LPTGIT
Trigger: TGTGATACCTGTGGGAAGGCATTTGCTGTCTCTAGT...TTGCTCAAGCCAGCACACTGACCTATCATGTCCGTAGGCATACTGGAGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGTCTGATGTAGGAGACTaGGTATCCGTGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVSDVGD*VSVTGR
Trigger: TCTGCCTGTCACGGATACTCAGTCTCCTACATCAGA...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACGCCCTGGGAACTGTCTaGTTCAATAGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYALGTV*FNRWGG
Trigger: CCCACCCCACCTATTGAATCAGACAGTTCCCAGGGC...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CCA 90 bp GCTTTTCTCCAGTATGCCTACGGACATGATAGGTCAGTGTGCTGGCTTGAGCAAAAAAGGTGCTCACAGTaGTGCGAATACTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: AFLQYAYGHDRSVCWLEQKRCSQ*CEYCIL
Trigger: CAAAATGCAGTATTCGCACCACTGTGAGCACCTTTT...TTGCTCAAGCCAGCACACTGACCTATCATGTCCGTAGGCATACTGGAGAAAAGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTACAGGCAGAAGCATGTaGTGGTCCTCAGTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWATGRSM*WSSVPS
Trigger: ACTTGGGACTGAGGACCATCACATGCTTCTGCCTGT...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTGGCCGGAGAATTGCTTaGATCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVGRRIA*IQEAEV
Trigger: AACCTCTGCCTCCTGGATTCAAGCAATTCTCCGGCC...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR GCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGGTCACAGAGAAAACCTaGTTCCCGCTGTTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVVTEKT*FPLFVQ
Trigger: CTGAACAAACAGCGGGAAGCAGGTTTTCTCTGTGAC...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTCTGAGATCACGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWALRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACGTGATCTCAG...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGACATTGGCTTGGCCTTaGAATACCTCTGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVTLAWP*NTSDPA
Trigger: AGCTGGATCAGAGGTATTCCAAGGCCAAGCCAATGT...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGAACTCCAACAGTTTCTaGAATCCATCAGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVNSNSF*NPSAFT
Trigger: GGTGAAGGCTGATGGATTTCAGAAACTGTTGGAGTT...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGGGTTTTTCTTCACCATaGTGCATGCGACTATGGAAG +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVGFSSP*CMRLWK
Trigger: CTTCCATAGTCGCATGCATCATGGTGAAGAAAAACC...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp GCTTTTCTCCAGTATGCCTACGGACATGATAGGTCAGTGTGCTGGCTTGAGCAAGTATGTTTTCGAGAATaGGTGATAAGAGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: AFLQYAYGHDRSVCWLEQVCFRE*VIRELE
Trigger: CTCTAGTTCTCTTATCACTCATTCTCGAAAACATAC...TTGCTCAAGCCAGCACACTGACCTATCATGTCCGTAGGCATACTGGAGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGTGTTCACTCAAAGTATaGTCCTCTGCACTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVCSLKV*SSALES
Trigger: AGACTCCAGTGCAGAGGATCATACTTTGAGTGAACA...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTACAGGCAGAAGCATGTaGTGGTCCTCAGTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVTGRSM*WSSVPS
Trigger: ACTTGGGACTGAGGACCATCACATGCTTCTGCCTGT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp ACCTGTATGTTTTCGAGAATGAGTGATAAGAGAACTAGAGACAGCAAATGCCTTACAGGCAGAAGCATGTaGTGGTCCTCAGTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: TCMFSRMSDKRTRDSKCLTGRSM*WSSVPS
Trigger: ACTTGGGACTGAGGACCATCACATGCTTCTGCCTGT...AAGGCATTTGCTGTCTCTAGTTCTCTTATCACTCATTCTCGAAAACATACAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGAGACTGAGTATCCGTaGCAGGCAGAAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAETEYP*QAEACD
Trigger: ATCACATGCTTCTGCCTGTCACGGATACTCAGTCTC...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGCTTCACCATGATGCATaGGACTATGGAAGACTAGCT +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVLHHDA*DYGRLA
Trigger: AGCTAGTCTTCCATAGTCGCATGCATCATGGTGAAG...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGCATGATAGGTCAGTGTaGTGGCTTGAGCAAATCTCT +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVHDRSV*WLEQIS
Trigger: AGAGATTTGCTCAAGCCAGCACACTGACCTATCATG...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTCTGAGGCCGGAGAATTaGTTGAATCCAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVLRPEN*LNPGGR
Trigger: TCTGCCTCCTGGATTCAAGCAATTCTCCGGCCTCAG...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGATAAGTGACGGTGAATaGCAACACTTCTACCACCGA +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVISDGE*QHFYHR
Trigger: TCGGTGGTAGAAGTGTTGCCATTCACCGTCACTTAT...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356716.8
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTCCACCTCTTCCACTTTaGGATAGTCAGCAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVPPLPL*DSQQPD
Trigger: ATCAGGCTGCTGACTATCTCAAAGTGGAAGAGGTGG...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTGAGACTGAGTATCCGTaGCAGGCAGAAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVETEYP*QAEACD
Trigger: ATCACATGCTTCTGCCTGTCACGGATACTCAGTCTC...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACGAGACTGAGTATCCGTaGCAGGCAGAAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYETEYP*QAEACD
Trigger: ATCACATGCTTCTGCCTGTCACGGATACTCAGTCTC...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTTCTGATGTAGGAGACTaGGTATCCGTGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVSDVGD*VSVTGR
Trigger: TCTGCCTGTCACGGATACTCAGTCTCCTACATCAGA...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCTGATGTAGGAGACTaGGTATCCGTGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYSDVGD*VSVTGR
Trigger: TCTGCCTGTCACGGATACTCAGTCTCCTACATCAGA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGCCTCAACAATGTATCTaGTGTAGGAGACTGAGTATC +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVPQQCI*CRRLSI
Trigger: GATACTCAGTCTCCTACATCAGATACATTGTTGAGG...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGTGTGCTGTGAAATGGTaGAGATCTCTACAGACTACA +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVCAVKW*RSLQTT
Trigger: TGTAGTCTGTAGAGATCTTCACCATTTCACAGCACA...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACGCCTGGGCAACAGAGTaGGACTCTACATGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYAWATE*DSTCLV
Trigger: TACCAAACATGTAGAGTCTCACTCTGTTGCCCAGGC...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTGCCTGGGCAACAGAGTaGGACTCTACATGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVAWATE*DSTCLV
Trigger: TACCAAACATGTAGAGTCTCACTCTGTTGCCCAGGC...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAGGCCGGAGAATTGCTTaGATCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPGRRIA*IQEAEV
Trigger: AACCTCTGCCTCCTGGATTCAAGCAATTCTCCGGCC...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR GCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGAGGTGCTCACAGTGGTaGGAATACTGCATTTTGATA +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVRCSQW*EYCILI
Trigger: TATCAAAATGCAGTATTCGCACCACTGTGAGCACCT...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGTGTGCCTTCTCAAACTaGTGGCTTCTGAAAACACTT +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVCAFSN*WLLKTL
Trigger: AAGTGTTTTCAGAAGCCAGCAGTTTGAGAAGGCACA...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGACATGCGTTTTCAGCTaGTTACATTGGGTAAATGCC +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVTCVFS*LHWVNA
Trigger: GGCATTTACCCAATGTAACCAGCTGAAAACGCATGT...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATAGGTCAGTGTGCTaGCTTGAGCAAATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWADRSVC*LEQISV
Trigger: GACAGAGATTTGCTCAAGCCAGCACACTGACCTATC...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTAACTCCAACAGTTTCTaGAATCCATCAGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWANSNSF*NPSAFT
Trigger: GGTGAAGGCTGATGGATTTCAGAAACTGTTGGAGTT...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGCTATGCTTCCTTGCATaGATCTTGAGATTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVLCFLA*ILRLLE
Trigger: TTCTAGCAATCTCAAGATTCATGCAAGGAAGCATAG...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTCAAACATTGCAGTTGTaGTGCAGCATCAGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAQTLQL*CSIRCF
Trigger: AAAGCACCTGATGCTGCATCACAACTGCAATGTTTG...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTAACACACTCTTGGGCTaGTACTATCGTGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWANTLLG*YYRGFC
Trigger: GCAAAATCCACGATAGTATCAGCCCAAGAGTGTGTT...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGGAAAAGGACCATTGTaGAACTACAACCACCACCAA +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAGKGPL*NYNHHQ
Trigger: TTGGTGGTGGTTGTAGTTTCACAATGGTCCTTTTCC...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAGATGTCATCTCACACTaGACAACAGCCTTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPDVISH*TTALWG
Trigger: CCCCCACAAGGCTGTTGTTCAGTGTGAGATGACATC...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGGGCAGAAATAAGAAATaGTGTCATCTCACACTGAAC +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVGRNKK*CHLTLN
Trigger: GTTCAGTGTGAGATGACATCATTTCTTATTTCTGCC...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGGCCCTTATAGAATTATaGCGTCACTGTAGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVALIEL*RHCSSF
Trigger: AAAACTGCTACAGTGACGTCATAATTCTATAAGGGC...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR GCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGCAGTGGTGCGAATACTaGATTTTGATATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVQWCEY*ILISEW
Trigger: CCATTCTGATATCAAAATGCAGTATTCGCACCACTG...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACGTCACAGAGAAAACCTaGTTCCCGCTGTTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYVTEKT*FPLFVQ
Trigger: CTGAACAAACAGCGGGAAGCAGGTTTTCTCTGTGAC...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTGTCACAGAGAAAACCTaGTTCCCGCTGTTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVVTEKT*FPLFVQ
Trigger: CTGAACAAACAGCGGGAAGCAGGTTTTCTCTGTGAC...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp ACCTGTATGTTTTCGAGAATGAGTGATAAGAGAACTAGAGACAGCAAATGCCTTGTCACAGAGAAAACCTaGTTCCCGCTGTTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: TCMFSRMSDKRTRDSKCLVTEKT*FPLFVQ
Trigger: CTGAACAAACAGCGGGAAGCAGGTTTTCTCTGTGAC...AAGGCATTTGCTGTCTCTAGTTCTCTTATCACTCATTCTCGAAAACATACAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR GCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTCATGATAGGTCAGTGTaGTGGCTTGAGCAAATCTCT +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAHDRSV*WLEQIS
Trigger: AGAGATTTGCTCAAGCCAGCACACTGACCTATCATG...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCACTGAGATCACGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPLRSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACGTGATCTCAG...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTACATTGGCTTGGCCTTaGAATACCTCTGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVTLAWP*NTSDPA
Trigger: AGCTGGATCAGAGGTATTCCAAGGCCAAGCCAATGT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACACATTGGCTTGGCCTTaGAATACCTCTGATCCAGCT +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYTLAWP*NTSDPA
Trigger: AGCTGGATCAGAGGTATTCCAAGGCCAAGCCAATGT...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACGATAGGTCAGTGTGCTaGCTTGAGCAAATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYDRSVC*LEQISV
Trigger: GACAGAGATTTGCTCAAGCCAGCACACTGACCTATC...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTAACTCCAACAGTTTCTaGAATCCATCAGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVNSNSF*NPSAFT
Trigger: GGTGAAGGCTGATGGATTTCAGAAACTGTTGGAGTT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCACCACCTCTTCCACTTTaGGATAGTCAGCAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPPPLPL*DSQQPD
Trigger: ATCAGGCTGCTGACTATCTCAAAGTGGAAGAGGTGG...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTCTGTTTTCGGGGAGTTaGAAGCCTTCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWALFSGS*KPSSSF
Trigger: AAAAGAAGAAGAAGGCTTTCAACTCCCCGAAAACAG...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGGCAGACGTAAGGTTTaGCTCCTTTATGTATTCTCA +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAGRRKV*LLYVFS
Trigger: TGAGAATACATAAAGGAGTCAAACCTTACGTCTGCC...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGGGTTTTTCTTCACCATaGTGCATGCGACTATGGAAG +
Preference number: 4 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLGFSSP*CMRLWK
Trigger: CTTCCATAGTCGCATGCATCATGGTGAAGAAAAACC...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGGTATGTTTTCGAGAATaGGTGATAAGAGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVVCFRE*VIRELE
Trigger: CTCTAGTTCTCTTATCACTCATTCTCGAAAACATAC...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTGTTCACTCAAAGTATaGTCCTCTGCACTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYCSLKV*SSALES
Trigger: AGACTCCAGTGCAGAGGATCATACTTTGAGTGAACA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp ACCTGTATGTTTTCGAGAATGAGTGATAAGAGAACTAGAGACAGCAAATGCCTTTGTTCACTCAAAGTATaGTCCTCTGCACTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TCMFSRMSDKRTRDSKCLCSLKV*SSALES
Trigger: AGACTCCAGTGCAGAGGATCATACTTTGAGTGAACA...AAGGCATTTGCTGTCTCTAGTTCTCTTATCACTCATTCTCGAAAACATACAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCATCTGATGTAGGAGACTaGGTATCCGTGACAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPSDVGD*VSVTGR
Trigger: TCTGCCTGTCACGGATACTCAGTCTCCTACATCAGA...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTCCTCAACAATGTATCTaGTGTAGGAGACTGAGTATC +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAPQQCI*CRRLSI
Trigger: GATACTCAGTCTCCTACATCAGATACATTGTTGAGG...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGCAAACATTGCAGTTGTaGTGCAGCATCAGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLQTLQL*CSIRCF
Trigger: AAAGCACCTGATGCTGCATCACAACTGCAATGTTTG...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACAACACACTCTTGGGCTaGTACTATCGTGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYNTLLG*YYRGFC
Trigger: GCAAAATCCACGATAGTATCAGCCCAAGAGTGTGTT...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGCCAAAGATCAGGCAGTaGAATAAATTAATATGTGGG +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVPKIRQ*NKLICG
Trigger: CCCACATATTAATTTATTTCACTGCCTGATCTTTGG...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTTGTGCTGTGAAATGGTaGAGATCTCTACAGACTACA +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWACAVKW*RSLQTT
Trigger: TGTAGTCTGTAGAGATCTTCACCATTTCACAGCACA...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR GCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTAGGTGCTCACAGTGGTaGGAATACTGCATTTTGATA +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWARCSQW*EYCILI
Trigger: TATCAAAATGCAGTATTCGCACCACTGTGAGCACCT...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACAGTCTCTCTAAAAGGTaGTCACAGTGGTGCGAATAC +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYSLSKR*SQWCEY
Trigger: GTATTCGCACCACTGTGAGCACCTTTTAGAGAGACT...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTAGTCTCTCTAAAAGGTaGTCACAGTGGTGCGAATAC +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVSLSKR*SQWCEY
Trigger: GTATTCGCACCACTGTGAGCACCTTTTAGAGAGACT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGAGTCTCTCTAAAAGGTaGTCACAGTGGTGCGAATAC +
Preference number: 4 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLSLSKR*SQWCEY
Trigger: GTATTCGCACCACTGTGAGCACCTTTTAGAGAGACT...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR GCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTTGTGCCTTCTCAAACTaGTGGCTTCTGAAAACACTT +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWACAFSN*WLLKTL
Trigger: AAGTGTTTTCAGAAGCCAGCAGTTTGAGAAGGCACA...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACCTTCACCATGATGCATaGGACTATGGAAGACTAGCT +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYLHHDA*DYGRLA
Trigger: AGCTAGTCTTCCATAGTCGCATGCATCATGGTGAAG...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTCTTCACCATGATGCATaGGACTATGGAAGACTAGCT +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVLHHDA*DYGRLA
Trigger: AGCTAGTCTTCCATAGTCGCATGCATCATGGTGAAG...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTCATGATAGGTCAGTGTaGTGGCTTGAGCAAATCTCT +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVHDRSV*WLEQIS
Trigger: AGAGATTTGCTCAAGCCAGCACACTGACCTATCATG...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTACTAGAGACAGCAAATaGCTTCCCACAGGTATCACA +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVTRDSK*LPTGIT
Trigger: TGTGATACCTGTGGGAAGGCATTTGCTGTCTCTAGT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGTACTATCGTGGATTTTaGTTAAATTATGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVYYRGF*LNYEGR
Trigger: CCTGCCCTCATAATTTAAGCAAAATCCACGATAGTA...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTAAAAGGTGCTCACAGTaGTGCGAATACTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAKRCSQ*CEYCIL
Trigger: CAAAATGCAGTATTCGCACCACTGTGAGCACCTTTT...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTACATGCGTTTTCAGCTaGTTACATTGGGTAAATGCC +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWATCVFS*LHWVNA
Trigger: GGCATTTACCCAATGTAACCAGCTGAAAACGCATGT...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGTTATCTGCACCAGAATaGACTTTTGTTTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVLSAPE*TFVLCF
Trigger: GAAGCACAAAACAAAAGTCCATTCTGGTGCAGATAA...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000602751.5
CDS-3UTR CCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTATAGCAACACACTCTTaGGCTGATACTATCGTGGAT +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAIATHS*ADTIVD
Trigger: ATCCACGATAGTATCAGCCCAAGAGTGTGTTGCTAT...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGAAAAGTGCTGACCATTaGTTTTCTCCAGAATACTCA +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVKSADH*FSPEYS
Trigger: TGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTT...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGCCCATGTCCCACCAGTaGCAATTTATTATGAAAATA +
Preference number: 4 (lower is better)
Translates to: IDPWGLQIATHSWADTIVPMSHQ*QFIMKI
Trigger: TATTTTCATAATAAATTGCCACTGGTGGGACATGGG...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACCTGTTTTCGGGGAGTTaGAAGCCTTCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYLFSGS*KPSSSF
Trigger: AAAAGAAGAAGAAGGCTTTCAACTCCCCGAAAACAG...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTCTGTTTTCGGGGAGTTaGAAGCCTTCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVLFSGS*KPSSSF
Trigger: AAAAGAAGAAGAAGGCTTTCAACTCCCCGAAAACAG...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp ACCTGTATGTTTTCGAGAATGAGTGATAAGAGAACTAGAGACAGCAAATGCCTTGGCAGACGTAAGGTTTaGCTCCTTTATGTATTCTCA +
Preference number: 4 (lower is better)
Translates to: TCMFSRMSDKRTRDSKCLGRRKV*LLYVFS
Trigger: TGAGAATACATAAAGGAGTCAAACCTTACGTCTGCC...AAGGCATTTGCTGTCTCTAGTTCTCTTATCACTCATTCTCGAAAACATACAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTCCTCAACAATGTATCTaGTGTAGGAGACTGAGTATC +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVPQQCI*CRRLSI
Trigger: GATACTCAGTCTCCTACATCAGATACATTGTTGAGG...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGCCTCAACAATGTATCTaGTGTAGGAGACTGAGTATC +
Preference number: 4 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLPQQCI*CRRLSI
Trigger: GATACTCAGTCTCCTACATCAGATACATTGTTGAGG...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAAACCAAAAGTGCTaGCCATTGGTTTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYSNQKC*PLVFSR
Trigger: TCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTTCAAACCAAAAGTGCTaGCCATTGGTTTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVSNQKC*PLVFSR
Trigger: TCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGA...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGCCCTTATAGAATTATaGCGTCACTGTAGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAALIEL*RHCSSF
Trigger: AAAACTGCTACAGTGACGTCATAATTCTATAAGGGC...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR GCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTTTCACTGTAACAGTGTaGACAATATCTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAFTVTV*TISCAG
Trigger: TCCAGCACAAGATATTGTGCACACTGTTACAGTGAA...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTTGTGCCTTCTCAAACTaGTGGCTTCTGAAAACACTT +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVCAFSN*WLLKTL
Trigger: AAGTGTTTTCAGAAGCCAGCAGTTTGAGAAGGCACA...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTGTGCCTTCTCAAACTaGTGGCTTCTGAAAACACTT +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYCAFSN*WLLKTL
Trigger: AAGTGTTTTCAGAAGCCAGCAGTTTGAGAAGGCACA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTTTATGTATTCTCATGTaGCTTCTCAAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWALCILM*LLKLLA
Trigger: AGCCAGCAGTTTGAGAAGGCACATGAGAATACATAA...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTTCCACTATGCTTCCTTaGATGAATCTTGAGATTGCT +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWASTMLP*MNLEIA
Trigger: AGCAATCTCAAGATTCATGCAAGGAAGCATAGTGGA...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACAAAAGGTGCTCACAGTaGTGCGAATACTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYKRCSQ*CEYCIL
Trigger: CAAAATGCAGTATTCGCACCACTGTGAGCACCTTTT...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTACATGCGTTTTCAGCTaGTTACATTGGGTAAATGCC +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVTCVFS*LHWVNA
Trigger: GGCATTTACCCAATGTAACCAGCTGAAAACGCATGT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGATAGCAACACACTCTTaGGCTGATACTATCGTGGAT +
Preference number: 4 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLIATHS*ADTIVD
Trigger: ATCCACGATAGTATCAGCCCAAGAGTGTGTTGCTAT...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR CCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTTATCTGCACCTGTATaGGACCGAAAGTGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYLSAPV*DRKCLL
Trigger: CAACAAACACTTTCGGTCCCATACAGGTGCAGATAA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544106.5
CDS-3UTR TCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAGGTTTTTCTTCACCATaGTGCATGCGACTATGGAAG +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPGFSSP*CMRLWK
Trigger: CTTCCATAGTCGCATGCATCATGGTGAAGAAAAACC...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTCTATGCTTCCTTGCATaGATCTTGAGATTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVLCFLA*ILRLLE
Trigger: TTCTAGCAATCTCAAGATTCATGCAAGGAAGCATAG...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGCTATGCTTCCTTGCATaGATCTTGAGATTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLLCFLA*ILRLLE
Trigger: TTCTAGCAATCTCAAGATTCATGCAAGGAAGCATAG...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR TCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGTATGTTTTCGAGAATaGGTGATAAGAGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAVCFRE*VIRELE
Trigger: CTCTAGTTCTCTTATCACTCATTCTCGAAAACATAC...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAAACACACTCTTGGGCTaGTACTATCGTGGATTTTGC +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPNTLLG*YYRGFC
Trigger: GCAAAATCCACGATAGTATCAGCCCAAGAGTGTGTT...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAGGAAAAGGACCATTGTaGAACTACAACCACCACCAA +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPGKGPL*NYNHHQ
Trigger: TTGGTGGTGGTTGTAGTTTCACAATGGTCCTTTTCC...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACGGCAGAAATAAGAAATaGTGTCATCTCACACTGAAC +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYGRNKK*CHLTLN
Trigger: GTTCAGTGTGAGATGACATCATTTCTTATTTCTGCC...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTCAGTGGTGCGAATACTaGATTTTGATATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVQWCEY*ILISEW
Trigger: CCATTCTGATATCAAAATGCAGTATTCGCACCACTG...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAAGTCTCTCTAAAAGGTaGTCACAGTGGTGCGAATAC +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPSLSKR*SQWCEY
Trigger: GTATTCGCACCACTGTGAGCACCTTTTAGAGAGACT...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR GCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGCCTTGTTTAGGATTTaGCTGAATCAAATCTGTAGA +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAALFRI*LNQICR
Trigger: TCTACAGATTTGATTCAGGCAAATCCTAAACAAGGC...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGTTCACTGTAACAGTGTaGACAATATCTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLFTVTV*TISCAG
Trigger: TCCAGCACAAGATATTGTGCACACTGTTACAGTGAA...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTTTATGTATTCTCATGTaGCTTCTCAAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVLCILM*LLKLLA
Trigger: AGCCAGCAGTTTGAGAAGGCACATGAGAATACATAA...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTTATGTATTCTCATGTaGCTTCTCAAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYLCILM*LLKLLA
Trigger: AGCCAGCAGTTTGAGAAGGCACATGAGAATACATAA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTTCCACTATGCTTCCTTaGATGAATCTTGAGATTGCT +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVSTMLP*MNLEIA
Trigger: AGCAATCTCAAGATTCATGCAAGGAAGCATAGTGGA...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCACATGATAGGTCAGTGTaGTGGCTTGAGCAAATCTCT +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPHDRSV*WLEQIS
Trigger: AGAGATTTGCTCAAGCCAGCACACTGACCTATCATG...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTATTCCCCAATCACTATaGTACAGTCACAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVIPQSL*YSHREN
Trigger: GTTTTCTCTGTGACTGTACCATAGTGATTGGGGAAT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTTTATCTGCACCAGAATaGACTTTTGTTTTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWALSAPE*TFVLCF
Trigger: GAAGCACAAAACAAAAGTCCATTCTGGTGCAGATAA...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000602751.5
CDS-3UTR TCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAGGCAGACGTAAGGTTTaGCTCCTTTATGTATTCTCA +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPGRRKV*LLYVFS
Trigger: TGAGAATACATAAAGGAGTCAAACCTTACGTCTGCC...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTGTATGTTTTCGAGAATaGGTGATAAGAGAACTAGAG +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVVCFRE*VIRELE
Trigger: CTCTAGTTCTCTTATCACTCATTCTCGAAAACATAC...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR TCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCATCAAACCAAAAGTGCTaGCCATTGGTTTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPSNQKC*PLVFSR
Trigger: TCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGA...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR TCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTCCAAAGATCAGGCAGTaGAATAAATTAATATGTGGG +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVPKIRQ*NKLICG
Trigger: CCCACATATTAATTTATTTCACTGCCTGATCTTTGG...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR GCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAAGGTGCTCACAGTGGTaGGAATACTGCATTTTGATA +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPRCSQW*EYCILI
Trigger: TATCAAAATGCAGTATTCGCACCACTGTGAGCACCT...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR GCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTGCCTTGTTTAGGATTTaGCTGAATCAAATCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVALFRI*LNQICR
Trigger: TCTACAGATTTGATTCAGGCAAATCCTAAACAAGGC...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR GCA 90 bp ACCTGTATGTTTTCGAGAATGAGTGATAAGAGAACTAGAGACAGCAAATGCCTTTACTATCGTGGATTTTaGTTAAATTATGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TCMFSRMSDKRTRDSKCLYYRGF*LNYEGR
Trigger: CCTGCCCTCATAATTTAAGCAAAATCCACGATAGTA...AAGGCATTTGCTGTCTCTAGTTCTCTTATCACTCATTCTCGAAAACATACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR CCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAACATGCGTTTTCAGCTaGTTACATTGGGTAAATGCC +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPTCVFS*LHWVNA
Trigger: GGCATTTACCCAATGTAACCAGCTGAAAACGCATGT...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAATAGCAACACACTCTTaGGCTGATACTATCGTGGAT +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPIATHS*ADTIVD
Trigger: ATCCACGATAGTATCAGCCCAAGAGTGTGTTGCTAT...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CCA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTTTATGTATTGATCCATaGGGCTTACAAATAGCAACA +
Preference number: 4 (lower is better)
Translates to: HSLCIDPWGLQIATHSWALCIDP*GLQIAT
Trigger: TGTTGCTATTTGTAAGCCCCATGGATCAATACATAA...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTAAAAGTGCTGACCATTaGTTTTCTCCAGAATACTCA +
Preference number: 4 (lower is better)
Translates to: QITQTKSADHWFSPEYSVKSADH*FSPEYS
Trigger: TGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CCA 90 bp AAATCAACTGTGGTTCTGAATACCCATTCACAGTTGACCTCAACAATGTATCTGAAAAGTGCTGACCATTaGTTTTCTCCAGAATACTCA +
Preference number: 4 (lower is better)
Translates to: KSTVVLNTHSQLTSTMYLKSADH*FSPEYS
Trigger: TGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTT...CAGATACATTGTTGAGGTCAACTGTGAATGGGTATTCAGAACCACAGTTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR CCA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACAGCATATATATGCCCTaGGAACTGTCTGATTCAATA +
Preference number: 4 (lower is better)
Translates to: QSQITQTKSADHWFSPEYSIYMP*ELSDSI
Trigger: TATTGAATCAGACAGTTCCCAGGGCATATATATGCT...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR GCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCATTATGTATTCTCATGTaGCTTCTCAAACTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPLCILM*LLKLLA
Trigger: AGCCAGCAGTTTGAGAAGGCACATGAGAATACATAA...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CCA 90 bp ACCTGTATGTTTTCGAGAATGAGTGATAAGAGAACTAGAGACAGCAAATGCCTTTTATGTATTGATCCATaGGGCTTACAAATAGCAACA +
Preference number: 4 (lower is better)
Translates to: TCMFSRMSDKRTRDSKCLLCIDP*GLQIAT
Trigger: TGTTGCTATTTGTAAGCCCCATGGATCAATACATAA...AAGGCATTTGCTGTCTCTAGTTCTCTTATCACTCATTCTCGAAAACATACAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR CCA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCATTAAAAAGCTCTCTGTaGAGTATAGACATAAAGCCA +
Preference number: 4 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPLKSSL*SIDIKP
Trigger: TGGCTTTATGTCTATACTCCACAGAGAGCTTTTTAA...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CAA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGCCTGCTTCCCGCTGTTaGTTCAGTCTCTCTAAAAGG +
Preference number: 5 (lower is better)
Translates to: IDPWGLQIATHSWADTIVPASRC*FSLSKR
Trigger: CCTTTTAGAGAGACTGAACAAACAGCGGGAAGCAGG...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGTGGGACCGAAAGTGTTaGTTGAGCTCTCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: IDPWGLQIATHSWADTIVWDRKC*LSSPEE
Trigger: TTCCTCAGGAGAGCTCAACAAACACTTTCGGTCCCA...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp GCTTTTCTCCAGTATGCCTACGGACATGATAGGTCAGTGTGCTGGCTTGAGCAAAATGGAATTTTACCCTaGATCGATAGCAACCCAAGG +
Preference number: 5 (lower is better)
Translates to: AFLQYAYGHDRSVCWLEQNGILP*IDSNPR
Trigger: CCTTGGGTTGCTATCGATCAAGGGTAAAATTCCATT...TTGCTCAAGCCAGCACACTGACCTATCATGTCCGTAGGCATACTGGAGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602751.5
CDS-3UTR CAA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTGCTGAGATCACGTCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: QITQTKSADHWFSPEYSVAEITS*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGACGTGATCTCAGC...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CAA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACGCTGAGATCACGTCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: QSQITQTKSADHWFSPEYAEITS*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGACGTGATCTCAGC...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CAA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTCCTGCTTCCCGCTGTTaGTTCAGTCTCTCTAAAAGG +
Preference number: 5 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAPASRC*FSLSKR
Trigger: CCTTTTAGAGAGACTGAACAAACAGCGGGAAGCAGG...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGCCTGTTTTCGGGGAGTaGAAAGCCTTCTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: IDPWGLQIATHSWADTIVPVFGE*KAFFFF
Trigger: AAAGAAGAAGAAGGCTTTCAACTCCCCGAAAACAGG...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGGACCGAAAGTGTTTGTaGAGCTCTCCTGAGGAAATA +
Preference number: 5 (lower is better)
Translates to: IDPWGLQIATHSWADTIVDRKCL*SSPEEI
Trigger: TATTTCCTCAGGAGAGCTCAACAAACACTTTCGGTC...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTTGGGACCGAAAGTGTTaGTTGAGCTCTCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAWDRKC*LSSPEE
Trigger: TTCCTCAGGAGAGCTCAACAAACACTTTCGGTCCCA...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACCCTGCTTCCCGCTGTTaGTTCAGTCTCTCTAAAAGG +
Preference number: 5 (lower is better)
Translates to: QSQITQTKSADHWFSPEYPASRC*FSLSKR
Trigger: CCTTTTAGAGAGACTGAACAAACAGCGGGAAGCAGG...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTGGGACCGAAAGTGTTaGTTGAGCTCTCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: QSQITQTKSADHWFSPEYWDRKC*LSSPEE
Trigger: TTCCTCAGGAGAGCTCAACAAACACTTTCGGTCCCA...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGGGGTGGGCCTGGATATaGTTATTTCTTAAGCATGTT +
Preference number: 5 (lower is better)
Translates to: IDPWGLQIATHSWADTIVGWAWI*LFLKHV
Trigger: AACATGCTTAAGAAATAACAATATCCAGGCCCACCC...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CAA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTCCTGTTTTCGGGGAGTaGAAAGCCTTCTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAPVFGE*KAFFFF
Trigger: AAAGAAGAAGAAGGCTTTCAACTCCCCGAAAACAGG...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGAATACCCATTCACAGTaGACCTCAACAATGTATCTG +
Preference number: 5 (lower is better)
Translates to: IDPWGLQIATHSWADTIVNTHSQ*TSTMYL
Trigger: CAGATACATTGTTGAGGTCAACTGTGAATGGGTATT...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCACCTGCTTCCCGCTGTTaGTTCAGTCTCTCTAAAAGG +
Preference number: 5 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPPASRC*FSLSKR
Trigger: CCTTTTAGAGAGACTGAACAAACAGCGGGAAGCAGG...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CAA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGTCTTCCATCTTTATTTaGCATTTAGTGACCACCTCT +
Preference number: 5 (lower is better)
Translates to: IDPWGLQIATHSWADTIVSSIFI*HLVTTS
Trigger: AGAGGTGGTCACTAAATGCAAAATAAAGATGGAAGA...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
CDS-3UTR CAA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTGACCGAAAGTGTTTGTaGAGCTCTCCTGAGGAAATA +
Preference number: 5 (lower is better)
Translates to: QITQTKSADHWFSPEYSVDRKCL*SSPEEI
Trigger: TATTTCCTCAGGAGAGCTCAACAAACACTTTCGGTC...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCATGGGACCGAAAGTGTTaGTTGAGCTCTCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPWDRKC*LSSPEE
Trigger: TTCCTCAGGAGAGCTCAACAAACACTTTCGGTCCCA...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CAA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGTGCATAGTTTATGTATaGATCCATGGGGCTTACAAA +
Preference number: 5 (lower is better)
Translates to: IDPWGLQIATHSWADTIVCIVYV*IHGAYK
Trigger: TTTGTAAGCCCCATGGATCAATACATAAACTATGCA...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp ATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGATACTATCGTGAATACCAGAGGAAATTaGGCAACTATTGCCCTTATA +
Preference number: 5 (lower is better)
Translates to: IDPWGLQIATHSWADTIVNTRGN*ATIALI
Trigger: TATAAGGGCAATAGTTGCCAAATTTCCTCTGGTATT...CACGATAGTATCAGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CAA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTGGGTGGGCCTGGATATaGTTATTTCTTAAGCATGTT +
Preference number: 5 (lower is better)
Translates to: HSLCIDPWGLQIATHSWAGWAWI*LFLKHV
Trigger: AACATGCTTAAGAAATAACAATATCCAGGCCCACCC...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CAA 90 bp CATAGTTTATGTATTGATCCATGGGGCTTACAAATAGCAACACACTCTTGGGCTAATACCCATTCACAGTaGACCTCAACAATGTATCTG +
Preference number: 5 (lower is better)
Translates to: HSLCIDPWGLQIATHSWANTHSQ*TSTMYL
Trigger: CAGATACATTGTTGAGGTCAACTGTGAATGGGTATT...AGCCCAAGAGTGTGTTGCTATTTGTAAGCCCCATGGATCAATACATAAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAGACCGAAAGTGTTTGTaGAGCTCTCCTGAGGAAATA +
Preference number: 5 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPDRKCL*SSPEEI
Trigger: TATTTCCTCAGGAGAGCTCAACAAACACTTTCGGTC...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CAA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACAATACCCATTCACAGTaGACCTCAACAATGTATCTG +
Preference number: 5 (lower is better)
Translates to: QSQITQTKSADHWFSPEYNTHSQ*TSTMYL
Trigger: CAGATACATTGTTGAGGTCAACTGTGAATGGGTATT...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTAGTGTGCACAATATCTaGTGCTGGAAAAGTATTTTC +
Preference number: 5 (lower is better)
Translates to: QITQTKSADHWFSPEYSVSVHNI*CWKSIF
Trigger: GAAAATACTTTTCCAGCACAAGATATTGTGCACACT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS-3UTR CAA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAAATGGAATTTTACCCTaGATCGATAGCAACCCAAGG +
Preference number: 5 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPNGILP*IDSNPR
Trigger: CCTTGGGTTGCTATCGATCAAGGGTAAAATTCCATT...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349841.10
CDS-3UTR CAA 90 bp CAATCTCAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACCACTGTAGCAGTTTTTaGTTCATTAGATGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: QSQITQTKSADHWFSPEYHCSSF*FIRCLD
Trigger: ATCCAAGCATCTAATGAACAAAAAACTGCTACAGTG...GTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTGAGATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CAA 90 bp CAGATAACTCAAACCAAAAGTGCTGACCATTGGTTTTCTCCAGAATACTCAGTTAATACCAGAGGAAATTaGGCAACTATTGCCCTTATA +
Preference number: 5 (lower is better)
Translates to: QITQTKSADHWFSPEYSVNTRGN*ATIALI
Trigger: TATAAGGGCAATAGTTGCCAAATTTCCTCTGGTATT...AACTGAGTATTCTGGAGAAAACCAATGGTCAGCACTTTTGGTTTGAGTTATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS-3UTR CAA 90 bp GTTTGCATCATACAAAGGTGGTATTTCAAACTCTATTCAAATAAGTCAGTCCCAAGTGTGCACAATATCTaGTGCTGGAAAAGTATTTTC +
Preference number: 5 (lower is better)
Translates to: VCIIQRWYFKLYSNKSVPSVHNI*CWKSIF
Trigger: GAAAATACTTTTCCAGCACAAGATATTGTGCACACT...TGGGACTGACTTATTTGAATAGAGTTTGAAATACCACCTTTGTATGATGCAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349841.10
ENST00000544106.5
CDS CAA 90 bp CCAATCACTATGGTACAGTCACAGAGAAAACCTGCTTCCCGCTGTTaGTTCAGTCTCTCTAAAAGGTGCTCACAGTGGTGCGAATACTGC +
Preference number: 6 (lower is better)
Translates to: PITMVQSQRKPASRC*FSLSKRCSQWCEYC
Trigger: GCAGTATTCGCACCACTGTGAGCACCTTTTAGAGAGACTGAACAAACAGCGGGAAGCAGGTTTTCTCTGTGACTGTACCATAGTGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS GCA 72 bp CCTGCTTCCCGCTGTTTGTTCAGTCTCTCTAAAAGGTaGTCACAGTGGTGCGAATACTGCATTTTGATATCA +
Preference number: 6 (lower is better)
Translates to: PASRCLFSLSKR*SQWCEYCILIS
Trigger: TGATATCAAAATGCAGTATTCGCACCACTGTGAGCACCTTTTAGAGAGACTGAACAAACAGCGGGAAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349841.10
ENST00000356716.8
ENST00000544106.5
ENST00000602751.5
CDS CCA 72 bp TCACAGTGGTGCGAATACTGCATTTTGATATCAGAATaGAATTTTACCCTTGATCTTGATCAACTAACACAA +
Preference number: 6 (lower is better)
Translates to: SQWCEYCILISE*NFTLDLDQLTQ
Trigger: TTGTGTTAGTTGATCAAGATCAAGGGTAAAATTCCATTCTGATATCAAAATGCAGTATTCGCACCACTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356716.8