RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYMX (Homo sapiens)

Ensembl gene IDs: ENSG00000262179

Ensembl transcript IDs: ENST00000573382.3, ENST00000576476.1

Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGATCCCTCTCATGCACAACCCTCACTATATCTTCTGTCCACTaGGCAGGCTTCGGTCAGTGCTGGTGCCAGGATTATCCTACTCCA +
Preference number: 1 (lower is better)
Translates to: GRSLSCTTLTISSVH*AGFGQCWCQDYPTP
Trigger: TGGAGTAGGATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGATATAGTGAGGGTTGTGCATGAGAGGGATCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR GCA 90 bp TTTCTGTTGGGAGTGGAGAGGCATGTCTGTGGCAGATCCCTCTCATaGACAACCCTCACTATATCTTCTGTCCACTGGGCAGGCTTCGGT +
Preference number: 1 (lower is better)
Translates to: FLLGVERHVCGRSLS*TTLTISSVHWAGFG
Trigger: ACCGAAGCCTGCCCAGTGGACAGAAGATATAGTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGCCTCTCCACTCCCAACAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR GCA 90 bp CTCACTATATCTTCTGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTaGCAGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAG +
Preference number: 1 (lower is better)
Translates to: LTISSVHWAGFGQCW*QDYPTPKESILWIQ
Trigger: CTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGATATAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR CCA 90 bp ACCCTCACTATATCTTCTGTCCACTGGGCAGGCTTCGGTCAGTGCTaGTGCCAGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATA +
Preference number: 1 (lower is better)
Translates to: TLTISSVHWAGFGQC*CQDYPTPKESILWI
Trigger: TATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGATATAGTGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR CCA 90 bp TTCTTCCAGAAAGACATTTCTGTTGGGAGTGGAGAGGCATGTCTGTaGCAGATCCCTCTCATGCACAACCCTCACTATATCTTCTGTCCA +
Preference number: 1 (lower is better)
Translates to: FFQKDISVGSGEACL*QIPLMHNPHYIFCP
Trigger: TGGACAGAAGATATAGTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGCCTCTCCACTCCCAACAGAAATGTCTTTCTGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR-3UTR GCA 90 bp CTGAGGCCAGAGGTGATTAGGAGTGGTCTTTGGGAGGAACTGCTGGAGGACAGAGCAGGCTTCGGTCAGTaGTGGTGCCAGGATTATCCT +
Preference number: 2 (lower is better)
Translates to: LRPEVIRSGLWEELLEDRAGFGQ*WCQDYP
Trigger: AGGATAATCCTGGCACCAGCACTGACCGAAGCCTGC...TCTGTCCTCCAGCAGTTCCTCCCAAAGACCACTCCTAATCACCTCTGGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR-3UTR CCA 90 bp CAGAAAGACATTTCTGTTGGGAGTGGAGAGGCATGTCTGTGGCAGATCCCTCTCATATCTTCTGTCCACTaGGCAGGCTTCGGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: QKDISVGSGEACLWQIPLISSVH*AGFGQC
Trigger: GCACTGACCGAAGCCTGCCCAGTGGACAGAAGATAT...GAGAGGGATCTGCCACAGACATGCCTCTCCACTCCCAACAGAAATGTCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR-3UTR CCA 90 bp GCATTCTTCCAGAAAGACATTTCTGTTGGGAGTGGAGAGGCATGTCTGTGGCAGGGCTTCGGTCAGTGCTaGTGCCAGGATTATCCTACT +
Preference number: 2 (lower is better)
Translates to: AFFQKDISVGSGEACLWQGFGQC*CQDYPT
Trigger: AGTAGGATAATCCTGGCACCAGCACTGACCGAAGCC...CTGCCACAGACATGCCTCTCCACTCCCAACAGAAATGTCTTTCTGGAAGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR-3UTR GCA 90 bp CTTTGGGAGGAACTGCTGGAGGACAGAGGGGCAATAATCAGTTTTGTGCTAGATTTCGGTCAGTGCTGGTaGCAGGATTATCCTACTCCA +
Preference number: 2 (lower is better)
Translates to: LWEELLEDRGAIISFVLDFGQCW*QDYPTP
Trigger: TGGAGTAGGATAATCCTGGCACCAGCACTGACCGAA...ATCTAGCACAAAACTGATTATTGCCCCTCTGTCCTCCAGCAGTTCCTCCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR CAA 90 bp AGTTTTGTGCTAGATGCAAGGCATTCTTCCAGAAAGACATTTCTGTaGGGAGTGGAGAGGCATGTCTGTGGCAGATCCCTCTCATGCACA +
Preference number: 2 (lower is better)
Translates to: SFVLDARHSSRKTFL*GVERHVCGRSLSCT
Trigger: TGTGCATGAGAGGGATCTGCCACAGACATGCCTCTCCACTCCCAACAGAAATGTCTTTCTGGAAGAATGCCTTGCATCTAGCACAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR-3UTR CCA 90 bp TTGGGAGGAACTGCTGGAGGACAGAGGGGCAATAATCAGTTTTGTGCTAGATGCGAAAGACATTTCTGTTaGGAGTGGAGAGGCATGTCT +
Preference number: 2 (lower is better)
Translates to: LGGTAGGQRGNNQFCARCERHFC*EWRGMS
Trigger: AGACATGCCTCTCCACTCCCAACAGAAATGTCTTTC...GCATCTAGCACAAAACTGATTATTGCCCCTCTGTCCTCCAGCAGTTCCTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR CCA 72 bp TCCCGCCTGAGGCCAGAGGTGATTAGGAGTGGTCTTTaGGAGGAACTGCTGGAGGACAGAGGGGCAATAATC +
Preference number: 3 (lower is better)
Translates to: SRLRPEVIRSGL*EELLEDRGAII
Trigger: GATTATTGCCCCTCTGTCCTCCAGCAGTTCCTCCCAAAGACCACTCCTAATCACCTCTGGCCTCAGGCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR GCA 72 bp GGAGTGGAGAGGCATGTCTGTGGCAGATCCCTCTCATaGACAACCCTCACTATATCTTCTGTCCACTGGGCA +
Preference number: 3 (lower is better)
Translates to: GVERHVCGRSLS*TTLTISSVHWA
Trigger: TGCCCAGTGGACAGAAGATATAGTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGCCTCTCCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR CCA 72 bp CTCTCATGCACAACCCTCACTATATCTTCTGTCCACTaGGCAGGCTTCGGTCAGTGCTGGTGCCAGGATTAT +
Preference number: 3 (lower is better)
Translates to: LSCTTLTISSVH*AGFGQCWCQDY
Trigger: ATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGATATAGTGAGGGTTGTGCATGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR GCA 72 bp TCTTCTGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTaGCAGGATTATCCTACTCCAAAAGAAAGCATTTTG +
Preference number: 3 (lower is better)
Translates to: SSVHWAGFGQCW*QDYPTPKESIL
Trigger: CAAAATGCTTTCTTTTGGAGTAGGATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
3UTR CCA 72 bp CAAGGCATTCTTCCAGAAAGACATTTCTGTTGGGAGTaGAGAGGCATGTCTGTGGCAGATCCCTCTCATGCA +
Preference number: 3 (lower is better)
Translates to: QGILPERHFCWE*RGMSVADPSHA
Trigger: TGCATGAGAGGGATCTGCCACAGACATGCCTCTCCACTCCCAACAGAAATGTCTTTCTGGAAGAATGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp CCTCACTATATCTTCTGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTGCCAGGAGCCTCTCGCATGTCCTaGGAGCCCAGGCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: PHYIFCPLGRLRSVLVPGASRMS*EPRRRA
Trigger: GGCCCGCCGCCTGGGCTCCCAGGACATGCGAGAGGC...TCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGATATAGTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp TGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTGCCAGGATTATCCTACTCCAAACAGCAGCGGGAGCAGTaGCGTGGGCATGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CPLGRLRSVLVPGLSYSKQQREQ*RGHGRA
Trigger: GGCCCTGCCATGCCCACGCCACTGCTCCCGCTGCTG...TTTGGAGTAGGATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR TCA 90 bp TTGGGAGTGGAGAGGCATGTCTGTGGCAGATCCCTCTCATGCACAACCCTCACTCAGGCGGTCCACTCTTaGGGCCTCCCCAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGVERHVCGRSLSCTTLTQAVHS*GLPSVW
Trigger: CCAGACGCTGGGGAGGCCTCAAGAGTGGACCGCCTG...AGTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGCCTCTCCACTCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp CTGAGGCCAGAGGTGATTAGGAGTGGTCTTTGGGAGGAACTGCTGGAGGACAGAAGGGGCAGGAGGTATTaGCGGGCCAGGCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LRPEVIRSGLWEELLEDRRGRRY*RARRAA
Trigger: TGCTGCCCGCCTGGCCCGCCAATACCTCCTGCCCCT...TCTGTCCTCCAGCAGTTCCTCCCAAAGACCACTCCTAATCACCTCTGGCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp GGAGTGGAGAGGCATGTCTGTGGCAGATCCCTCTCATGCACAACCCTCACTATAAGGGGCAGGAGGTATTaGCGGGCCAGGCGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GVERHVCGRSLSCTTLTIRGRRY*RARRAA
Trigger: TGCTGCCCGCCTGGCCCGCCAATACCTCCTGCCCCT...TATAGTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGCCTCTCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp GAGGTGATTAGGAGTGGTCTTTGGGAGGAACTGCTGGAGGACAGAGGGGCAATAGGCCTCCCCAGCGTCTaGCGAGTGTCGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: EVIRSGLWEELLEDRGAIGLPSV*RVSLAE
Trigger: CTCAGCCAGCGACACTCGCCAGACGCTGGGGAGGCC...TATTGCCCCTCTGTCCTCCAGCAGTTCCTCCCAAAGACCACTCCTAATCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp ATTAGGAGTGGTCTTTGGGAGGAACTGCTGGAGGACAGAGGGGCAATAATCAGTGGCCTCCCCAGCGTCTaGCGAGTGTCGCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: IRSGLWEELLEDRGAIISGLPSV*RVSLAE
Trigger: CTCAGCCAGCGACACTCGCCAGACGCTGGGGAGGCC...ACTGATTATTGCCCCTCTGTCCTCCAGCAGTTCCTCCCAAAGACCACTCCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR TCA 90 bp TCTTTGGGAGGAACTGCTGGAGGACAGAGGGGCAATAATCAGTTTTGTGCTAGACAGGCGGTCCACTCTTaGGGCCTCCCCAGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: SLGGTAGGQRGNNQFCARQAVHS*GLPSVW
Trigger: CCAGACGCTGGGGAGGCCTCAAGAGTGGACCGCCTG...TCTAGCACAAAACTGATTATTGCCCCTCTGTCCTCCAGCAGTTCCTCCCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR GCA 90 bp GTTGGGAGTGGAGAGGCATGTCTGTGGCAGATCCCTCTCATGCACAACCCTCACGCAGGCTTCGGTCAGTaGTGGTGCCAGGATTATCCT +
Preference number: 4 (lower is better)
Translates to: VGSGEACLWQIPLMHNPHAGFGQ*WCQDYP
Trigger: AGGATAATCCTGGCACCAGCACTGACCGAAGCCTGC...GTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGCCTCTCCACTCCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp ATCTTCTGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTGCCAGGATTATCCTACTGCTGCCAGGACTTGTaGCCTCACTTTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: IFCPLGRLRSVLVPGLSYCCQDL*PHFWGP
Trigger: AGGCCCCCAAAAGTGAGGCCACAAGTCCTGGCAGCA...GTAGGATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp TGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTGCCAGGATTATCCTACTCCAAATGCTGCCAGGACTTGTaGCCTCACTTTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: CPLGRLRSVLVPGLSYSKCCQDL*PHFWGP
Trigger: AGGCCCCCAAAAGTGAGGCCACAAGTCCTGGCAGCA...TTTGGAGTAGGATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR GCA 90 bp CACAACCCTCACTATATCTTCTGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTGGCAGGCTTCGGTCAGTaGTGGTGCCAGGATTATCCT +
Preference number: 4 (lower is better)
Translates to: HNPHYIFCPLGRLRSVLVAGFGQ*WCQDYP
Trigger: AGGATAATCCTGGCACCAGCACTGACCGAAGCCTGC...CACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGATATAGTGAGGGTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp AGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAGCTGCTGCCAGGACCAGCAGCGGGAGCAGTaGCGTGGGCATGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RIILLQKKAFCGYSCCQDQQREQ*RGHGRA
Trigger: GGCCCTGCCATGCCCACGCCACTGCTCCCGCTGCTG...GTCCTGGCAGCAGCTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp GTTGGGAGTGGAGAGGCATGTCTGTGGCAGATCCCTCTCATGCACAACCCTCACGGCTTCGGTCAGTGCTaGTGCCAGGATTATCCTACT +
Preference number: 4 (lower is better)
Translates to: VGSGEACLWQIPLMHNPHGFGQC*CQDYPT
Trigger: AGTAGGATAATCCTGGCACCAGCACTGACCGAAGCC...GTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGCCTCTCCACTCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR GCA 90 bp GGCAGGCTTCGGTCAGTGCTGGTGCCAGGATTATCCTACTCCAAAAGAAAGCATGCCGGGCAGAACTGCTaGTCAGAATCAGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GRLRSVLVPGLSYSKRKHAGQNC*SESVSG
Trigger: GCCAGAGACTGATTCTGAGCAGCAGTTCTGCCCGGC...ATGCTTTCTTTTGGAGTAGGATAATCCTGGCACCAGCACTGACCGAAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573382.3
CDS-3UTR GCA 90 bp GTCTGTGGCAGATCCCTCTCATGCACAACCCTCACTATATCTTCTGTCCACTGGCTGAGTGCTGGGCTTTaGAGGCAGGTCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: VCGRSLSCTTLTISSVHWLSAGL*RQVCLH
Trigger: ATGGAGGCAGACCTGCCTGCAAAGCCCAGCACTCAG...CCAGTGGACAGAAGATATAGTGAGGGTTGTGCATGAGAGGGATCTGCCACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573382.3
CDS-3UTR TCA 90 bp CTGAGGCCAGAGGTGATTAGGAGTGGTCTTTGGGAGGAACTGCTGGAGGACAGAAAGCACTGGGAACCTTaGTGTTCCCATTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LRPEVIRSGLWEELLEDRKHWEP*CSHLQG
Trigger: TCCCTGCAAATGGGAACATCAAGGTTCCCAGTGCTT...TCTGTCCTCCAGCAGTTCCTCCCAAAGACCACTCCTAATCACCTCTGGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR GCA 90 bp CAGAAAGACATTTCTGTTGGGAGTGGAGAGGCATGTCTGTGGCAGATCCCTCTCGTCTTTGGGAGGAACTaGTGGAGGACAGAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QKDISVGSGEACLWQIPLVFGRN*WRTEGQ
Trigger: TTGCCCCTCTGTCCTCCAGCAGTTCCTCCCAAAGAC...GAGAGGGATCTGCCACAGACATGCCTCTCCACTCCCAACAGAAATGTCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR GCA 90 bp TCTTCTGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTGCCAGGATTATCCTACTGGCAGATCCCTCTCATaGACAACCCTCACTATATCT +
Preference number: 4 (lower is better)
Translates to: SSVHWAGFGQCWCQDYPTGRSLS*TTLTIS
Trigger: AGATATAGTGAGGGTTGTGCATGAGAGGGATCTGCC...AGTAGGATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR GCA 90 bp TATATCTTCTGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTGCCAGGATTATCCCTTTGCAGGCAGGTCTaGCTCCATAAGCAACTCAGA +
Preference number: 4 (lower is better)
Translates to: YIFCPLGRLRSVLVPGLSLCRQV*LHKQLR
Trigger: TCTGAGTTGCTTATGGAGGCAGACCTGCCTGCAAAG...GGATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573382.3
CDS-3UTR CCA 90 bp TTGGGAGGAACTGCTGGAGGACAGAGGGGCAATAATCAGTTTTGTGCTAGATGCTTGTGGCCTCACTTTTaGGGGCCTAACCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LGGTAGGQRGNNQFCARCLWPHF*GPNLSL
Trigger: GAGGGAGAGGTTAGGCCCCCAAAAGTGAGGCCACAA...GCATCTAGCACAAAACTGATTATTGCCCCTCTGTCCTCCAGCAGTTCCTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR GCA 90 bp TCTCATGCACAACCCTCACTATATCTTCTGTCCACTGGGCAGGCTTCGGTCAGTTTCGGTCAGTGCTGGTaGCAGGATTATCCTACTCCA +
Preference number: 4 (lower is better)
Translates to: SHAQPSLYLLSTGQASVSFGQCW*QDYPTP
Trigger: TGGAGTAGGATAATCCTGGCACCAGCACTGACCGAA...ACTGACCGAAGCCTGCCCAGTGGACAGAAGATATAGTGAGGGTTGTGCATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR GCA 90 bp GTGGAGAGGCATGTCTGTGGCAGATCCCTCTCATGCACAACCCTCACTATATCTTTCGGTCAGTGCTGGTaGCAGGATTATCCTACTCCA +
Preference number: 4 (lower is better)
Translates to: VERHVCGRSLSCTTLTISFGQCW*QDYPTP
Trigger: TGGAGTAGGATAATCCTGGCACCAGCACTGACCGAA...AGATATAGTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGCCTCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp ACTATATCTTCTGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTGCCAGGATTATCATTTCTGTTGGGAGTaGAGAGGCATGTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: TISSVHWAGFGQCWCQDYHFCWE*RGMSVA
Trigger: TGCCACAGACATGCCTCTCCACTCCCAACAGAAATG...ATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGATATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR GCA 90 bp TCTTTGGGAGGAACTGCTGGAGGACAGAGGGGCAATAATCAGTTTTGTGCTAGAAGTGCCGGGCAGAACTaGTGCTCAGAATCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SLGGTAGGQRGNNQFCARSAGQN*CSESVS
Trigger: AGAGACTGATTCTGAGCAGCAGTTCTGCCCGGCACT...TCTAGCACAAAACTGATTATTGCCCCTCTGTCCTCCAGCAGTTCCTCCCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573382.3
CDS-3UTR GCA 90 bp GTGCCAGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAGCTGCTGCCGTCTTTGGGAGGAACTaGTGGAGGACAGAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: VPGLSYSKRKHFVDTAAAVFGRN*WRTEGQ
Trigger: TTGCCCCTCTGTCCTCCAGCAGTTCCTCCCAAAGAC...GGCAGCAGCTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp GGTGCCAGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAGCTGCTGCTTGTGGCCTCACTTTTaGGGGCCTAACCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GARIILLQKKAFCGYSCCLWPHF*GPNLSL
Trigger: GAGGGAGAGGTTAGGCCCCCAAAAGTGAGGCCACAA...GCAGCAGCTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCTGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp GCATTCTTCCAGAAAGACATTTCTGTTGGGAGTGGAGAGGCATGTCTGTGGCAGATTAGGAGTGGTCTTTaGGAGGAACTGCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: AFFQKDISVGSGEACLWQIRSGL*EELLED
Trigger: GTCCTCCAGCAGTTCCTCCCAAAGACCACTCCTAAT...CTGCCACAGACATGCCTCTCCACTCCCAACAGAAATGTCTTTCTGGAAGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR GCA 90 bp GCATGTCTGTGGCAGATCCCTCTCATGCACAACCCTCACTATATCTTCTGTCCAGGCAGATCCCTCTCATaGACAACCCTCACTATATCT +
Preference number: 4 (lower is better)
Translates to: ACLWQIPLMHNPHYIFCPGRSLS*TTLTIS
Trigger: AGATATAGTGAGGGTTGTGCATGAGAGGGATCTGCC...TGGACAGAAGATATAGTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp GGTGCCAGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAGCTGCTGCATATCTTCTGTCCACTaGGCAGGCTTCGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GARIILLQKKAFCGYSCCISSVH*AGFGQC
Trigger: GCACTGACCGAAGCCTGCCCAGTGGACAGAAGATAT...GCAGCAGCTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCTGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp CAAGGCATTCTTCCAGAAAGACATTTCTGTTGGGAGTGGAGAGGCATGTCTGTGATTAGGAGTGGTCTTTaGGAGGAACTGCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: QGILPERHFCWEWRGMSVIRSGL*EELLED
Trigger: GTCCTCCAGCAGTTCCTCCCAAAGACCACTCCTAAT...CACAGACATGCCTCTCCACTCCCAACAGAAATGTCTTTCTGGAAGAATGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR GCA 90 bp GTGCCAGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAGCTGCTGCCTTTTGTGGATACAGCTaGTGCCAGGACTTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VPGLSYSKRKHFVDTAAAFCGYS*CQDLWP
Trigger: AGGCCACAAGTCCTGGCAGCAGCTGTATCCACAAAA...GGCAGCAGCTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp AGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAGCTGCTGCCAGGACTCTGGCGAGTGTCGCTaGCTGAGAATGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: RIILLQKKAFCGYSCCQDSGECR*LRMNSR
Trigger: TCTGCTGTTCATTCTCAGCCAGCGACACTCGCCAGA...GTCCTGGCAGCAGCTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp GGACAGAGGGGCAATAATCAGTTTTGTGCTAGATGCAAGGCATTCTTCCAGAAATCTGGCGAGTGTCGCTaGCTGAGAATGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: GQRGNNQFCARCKAFFQKSGECR*LRMNSR
Trigger: TCTGCTGTTCATTCTCAGCCAGCGACACTCGCCAGA...TTTCTGGAAGAATGCCTTGCATCTAGCACAAAACTGATTATTGCCCCTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp AGTGCTGGTGCCAGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAGCGGCTTCGGTCAGTGCTaGTGCCAGGATTATCCTACT +
Preference number: 4 (lower is better)
Translates to: SAGARIILLQKKAFCGYSGFGQC*CQDYPT
Trigger: AGTAGGATAATCCTGGCACCAGCACTGACCGAAGCC...GCTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCTGGCACCAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp GCATGTCTGTGGCAGATCCCTCTCATGCACAACCCTCACTATATCTTCTGTCCAGAAAGACATTTCTGTTaGGAGTGGAGAGGCATGTCT +
Preference number: 4 (lower is better)
Translates to: ACLWQIPLMHNPHYIFCPERHFC*EWRGMS
Trigger: AGACATGCCTCTCCACTCCCAACAGAAATGTCTTTC...TGGACAGAAGATATAGTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR TCA 90 bp AGTGCTGGTGCCAGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAGCAAGCACTGGGAACCTTaGTGTTCCCATTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SAGARIILLQKKAFCGYSKHWEP*CSHLQG
Trigger: TCCCTGCAAATGGGAACATCAAGGTTCCCAGTGCTT...GCTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCTGGCACCAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp AGTGCTGGTGCCAGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAGCCATTTCTGTTGGGAGTaGAGAGGCATGTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SAGARIILLQKKAFCGYSHFCWE*RGMSVA
Trigger: TGCCACAGACATGCCTCTCCACTCCCAACAGAAATG...GCTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCTGGCACCAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp TCTTTGGGAGGAACTGCTGGAGGACAGAGGGGCAATAATCAGTTTTGTGCTAGAGAAAGACATTTCTGTTaGGAGTGGAGAGGCATGTCT +
Preference number: 4 (lower is better)
Translates to: SLGGTAGGQRGNNQFCARERHFC*EWRGMS
Trigger: AGACATGCCTCTCCACTCCCAACAGAAATGTCTTTC...TCTAGCACAAAACTGATTATTGCCCCTCTGTCCTCCAGCAGTTCCTCCCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CCA 90 bp GGTGCCAGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAGCTGCTGCGTCTGGAAGACAGTCTaGATTCAAATCTTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GARIILLQKKAFCGYSCCVWKTV*IQILPL
Trigger: GAGAGGCAAGATTTGAATCCAGACTGTCTTCCAGAC...GCAGCAGCTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCTGGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573382.3
CDS CCA 90 bp GAGCCCAGGCGGCGGGCCAATCGGCGCAGCAGGGGCAGGAGGTATTaGCGGGCCAGGCGGGCAGCAGGCAGCAGCAGGCAGGACAGCAGC +
Preference number: 5 (lower is better)
Translates to: EPRRRANRRSRGRRY*RARRAAGSSRQDSS
Trigger: GCTGCTGTCCTGCCTGCTGCTGCCTGCTGCCCGCCTGGCCCGCCAATACCTCCTGCCCCTGCTGCGCCGATTGGCCCGCCGCCTGGGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS CCA 90 bp CAGCAGCAGGCAGGACAGCAGCAATCGAAGCAGCAGCGGGAGCAGTaGCGTGGGCATGGCAGGGCCAGTGAGTCAGTGCCCCCACCAATC +
Preference number: 5 (lower is better)
Translates to: QQQAGQQQSKQQREQ*RGHGRASESVPPPI
Trigger: GATTGGTGGGGGCACTGACTCACTGGCCCTGCCATGCCCACGCCACTGCTCCCGCTGCTGCTTCGATTGCTGCTGTCCTGCCTGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576476.1
CDS-3UTR CAA 90 bp TGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTGCCAGGATTATCCTACTCCAAACAGGGGCAGGAGGTATaGGCGGGCCAGGCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CPLGRLRSVLVPGLSYSKQGQEV*AGQAGS
Trigger: GCTGCCCGCCTGGCCCGCCAATACCTCCTGCCCCTG...TTTGGAGTAGGATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CAA 90 bp TTGGGAGTGGAGAGGCATGTCTGTGGCAGATCCCTCTCATGCACAACCCTCACTCAGGGGCAGGAGGTATaGGCGGGCCAGGCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LGVERHVCGRSLSCTTLTQGQEV*AGQAGS
Trigger: GCTGCCCGCCTGGCCCGCCAATACCTCCTGCCCCTG...AGTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGCCTCTCCACTCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CAA 90 bp TGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTGCCAGGATTATCCTACTCCAAACCAGGCGGTCCACTCTaGAGGCCTCCCCAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: CPLGRLRSVLVPGLSYSKPGGPL*RPPQRL
Trigger: CAGACGCTGGGGAGGCCTCAAGAGTGGACCGCCTGG...TTTGGAGTAGGATAATCCTGGCACCAGCACTGACCGAAGCCTGCCCAGTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CAA 90 bp CACAACCCTCACTATATCTTCTGTCCACTGGGCAGGCTTCGGTCAGTGCTGGTGCCAGGCGGTCCACTCTaGAGGCCTCCCCAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: HNPHYIFCPLGRLRSVLVPGGPL*RPPQRL
Trigger: CAGACGCTGGGGAGGCCTCAAGAGTGGACCGCCTGG...CACCAGCACTGACCGAAGCCTGCCCAGTGGACAGAAGATATAGTGAGGGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CAA 90 bp GTTGGGAGTGGAGAGGCATGTCTGTGGCAGATCCCTCTCATGCACAACCCTCACAGCTGCTGCCAGGACTaGTGGCCTCACTTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: VGSGEACLWQIPLMHNPHSCCQD*WPHFWG
Trigger: CCCCCAAAAGTGAGGCCACAAGTCCTGGCAGCAGCT...GTGAGGGTTGTGCATGAGAGGGATCTGCCACAGACATGCCTCTCCACTCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS-3UTR CAA 90 bp AGGATTATCCTACTCCAAAAGAAAGCATTTTGTGGATACAGCTGCTGCCAGGACTGCCTCTCTGCTAAATaGTCACTTGTCCCTCAGTTA +
Preference number: 5 (lower is better)
Translates to: RIILLQKKAFCGYSCCQDCLSAK*SLVPQL
Trigger: TAACTGAGGGACAAGTGACAATTTAGCAGAGAGGCA...GTCCTGGCAGCAGCTGTATCCACAAAATGCTTTCTTTTGGAGTAGGATAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573382.3
CDS CCA 72 bp CGGCGGGCCAATCGGCGCAGCAGGGGCAGGAGGTATTaGCGGGCCAGGCGGGCAGCAGGCAGCAGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RRANRRSRGRRY*RARRAAGSSRQ
Trigger: CTGCCTGCTGCTGCCTGCTGCCCGCCTGGCCCGCCAATACCTCCTGCCCCTGCTGCGCCGATTGGCCCGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1
CDS CAA 72 bp GGCCTAACCTCTCCCTCCTCTCCAGGCGGTCCACTCTaGAGGCCTCCCCAGCGTCTGGCGAGTGTCGCTGGC +
Preference number: 6 (lower is better)
Translates to: GLTSPSSPGGPL*RPPQRLASVAG
Trigger: GCCAGCGACACTCGCCAGACGCTGGGGAGGCCTCAAGAGTGGACCGCCTGGAGAGGAGGGAGAGGTTAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573382.3
ENST00000576476.1