RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYLK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101306

Ensembl transcript IDs: ENST00000375985.5, ENST00000375994.6, ENST00000468730.1

Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGGCCGACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATaGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGT +
Preference number: 1 (lower is better)
Translates to: CGRQAGALSGEVLAG*IQATLRGGSHRGSG
Trigger: ACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGTCGGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 90 bp GCCAGCCTGGGCCAGATGGTGTGGGCTCGGCCTTATCTGCTGGAGTaGGGAGGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGC +
Preference number: 1 (lower is better)
Translates to: ASLGQMVWARPYLLE*GGGGGMEVLSHKAC
Trigger: GCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACCTCCCCACTCCAGCAGATAAGGCCGAGCCCACACCATCTGGCCCAGGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 90 bp CTGGGCTGGGCGCCCTCTCTCTCACACAGAGTTCCTGTGTGTTGGTaGTCGCAAGGAAGGTGGGTGGGGGCCAGCCTGGGCCAGATGGTG +
Preference number: 1 (lower is better)
Translates to: LGWAPSLSHRVPVCW*SQGRWVGASLGQMV
Trigger: CACCATCTGGCCCAGGCTGGCCCCCACCCACCTTCCTTGCGACCACCAACACACAGGAACTCTGTGTGAGAGAGAGGGCGCCCAGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 90 bp CCGAGCCTCCCAGCCTGGCACAGCCTTGTCCTAACGAGGCTGCCCTaGGGATCTGGCTGCCTTTTCTGGCCTTCTGGGCTGTGTGGCTTC +
Preference number: 1 (lower is better)
Translates to: PSLPAWHSLVLTRLP*GSGCLFWPSGLCGF
Trigger: GAAGCCACACAGCCCAGAAGGCCAGAAAAGGCAGCCAGATCCCCAGGGCAGCCTCGTTAGGACAAGGCTGTGCCAGGCTGGGAGGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 90 bp TTCCTGTGTGTTGGTGGTCGCAAGGAAGGTGGGTGGGGGCCAGCCTaGGCCAGATGGTGTGGGCTCGGCCTTATCTGCTGGAGTGGGGAG +
Preference number: 1 (lower is better)
Translates to: FLCVGGRKEGGWGPA*ARWCGLGLICWSGE
Trigger: CTCCCCACTCCAGCAGATAAGGCCGAGCCCACACCATCTGGCCCAGGCTGGCCCCCACCCACCTTCCTTGCGACCACCAACACACAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 90 bp TGTGGGCTCGGCCTTATCTGCTGGAGTGGGGAGGTGGCGGGGGCATaGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCT +
Preference number: 1 (lower is better)
Translates to: CGLGLICWSGEVAGA*RSSLTKPALSSLAA
Trigger: AGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACCTCCCCACTCCAGCAGATAAGGCCGAGCCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 90 bp GGGCCAGATGGTGTGGGCTCGGCCTTATCTGCTGGAGTGGGGAGGTaGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTT +
Preference number: 1 (lower is better)
Translates to: GPDGVGSALSAGVGR*RGHGGPLSQSLLCL
Trigger: AAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACCTCCCCACTCCAGCAGATAAGGCCGAGCCCACACCATCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 90 bp CGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTaGCAGCTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCA +
Preference number: 1 (lower is better)
Translates to: RGHGGPLSQSLLCLP*QLGLRNQRCSLSAP
Trigger: TGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 90 bp ATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTaGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAG +
Preference number: 1 (lower is better)
Translates to: MEVLSHKACSVFPGS*ALGISVAAFLPHQE
Trigger: CTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 90 bp ATCCAACCTGTACATTTATTTACAAGGCACAAGCTGAGAGCAGACTaGAGGCTGCCCCATGGCCTTCCTAATTCTCCTGGGCCTGCTGAC +
Preference number: 1 (lower is better)
Translates to: IQPVHLFTRHKLRAD*RLPHGLPNSPGPAD
Trigger: GTCAGCAGGCCCAGGAGAATTAGGAAGGCCATGGGGCAGCCTCCAGTCTGCTCTCAGCTTGTGCCTTGTAAATAAATGTACAGGTTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375994.6
3UTR-3UTR CCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCGCTTCAACGGGGGCCTaGAGTCTGGGGTGTGGCCGA +
Preference number: 2 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSASTGA*SLGCGR
Trigger: TCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGC...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR CCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTGCCCCGGCCACTGTGTaGCTGCGTCCAGGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSAPATV*LRPGFS
Trigger: GCTGAAGCCTGGACGCAGCCACACAGTGGCCGGGGC...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR GCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTCGGCCACTGTGTGGCTaGGTCCAGGCTTCAGCTGCG +
Preference number: 2 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSRPLCG*VQASAA
Trigger: CGCAGCTGAAGCCTGGACGCAGCCACACAGTGGCCG...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR CCA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGGCTGCCCTGGGGATCTaGCTGCCTTTTCTGGCCTTC +
Preference number: 2 (lower is better)
Translates to: REPGAASTGAWSLGCGRQAALGI*LPFLAF
Trigger: GAAGGCCAGAAAAGGCAGCCAGATCCCCAGGGCAGC...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR CCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTCACTGCATGGGGGCGTaGGGAGCCCCGAGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTHCMGA*GAPSLP
Trigger: TGGGAGGCTCGGGGCTCCCCACGCCCCCATGCAGTG...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR CCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGGCCCCGGCCACTGTGTaGCTGCGTCCAGGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGAPATV*LRPGFS
Trigger: GCTGAAGCCTGGACGCAGCCACACAGTGGCCGGGGC...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR CCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATCACTGCATGGGGGCGTaGGGAGCCCCGAGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHHCMGA*GAPSLP
Trigger: TGGGAGGCTCGGGGCTCCCCACGCCCCCATGCAGTG...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR CCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATCGGGGGCCTGGAGTCTaGGGTGTGGCCGACAGGCTG +
Preference number: 2 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHRGPGV*GVADRL
Trigger: CAGCCTGTCGGCCACACCCCAGACTCCAGGCCCCCG...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR GCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCCCCTGGGGATCTGGCTaGCTTTTCTGGCCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFPWGSG*LFWPSG
Trigger: CCCAGAAGGCCAGAAAAGGCAGCCAGATCCCCAGGG...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR GCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACCCCTGGGGATCTGGCTaGCTTTTCTGGCCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHPWGSG*LFWPSG
Trigger: CCCAGAAGGCCAGAAAAGGCAGCCAGATCCCCAGGG...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR CCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTGCTGCCCTGGGGATCTaGCTGCCTTTTCTGGCCTTC +
Preference number: 2 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSAALGI*LPFLAF
Trigger: GAAGGCCAGAAAAGGCAGCCAGATCCCCAGGGCAGC...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR CCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCCCGAGCCTCCCAGCCTaGCACAGCCTTGTCCTAACG +
Preference number: 2 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSPSLPA*HSLVLT
Trigger: CGTTAGGACAAGGCTGTGCCAGGCTGGGAGGCTCGG...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR GCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATCGGCCACTGTGTGGCTaGGTCCAGGCTTCAGCTGCG +
Preference number: 2 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHRPLCG*VQASAA
Trigger: CGCAGCTGAAGCCTGGACGCAGCCACACAGTGGCCG...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR CCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCGAGGTGCTAGCAGGATaGATCCAGGCCACACTCCGA +
Preference number: 2 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGEVLAG*IQATLR
Trigger: TCGGAGTGTGGCCTGGATCCATCCTGCTAGCACCTC...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR-3UTR GCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCCTTAGGAATCAGCGTTaGAGCCTTTCTGCCCCACCA +
Preference number: 2 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGLRNQR*SLSAPP
Trigger: TGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAG...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 72 bp CAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATaGATCCAGGCCACACTCCGAGGCGGCTCACATCGG +
Preference number: 3 (lower is better)
Translates to: QAGALSGEVLAG*IQATLRGGSHR
Trigger: CCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 72 bp GTTGGTGGTCGCAAGGAAGGTGGGTGGGGGCCAGCCTaGGCCAGATGGTGTGGGCTCGGCCTTATCTGCTGG +
Preference number: 3 (lower is better)
Translates to: VGGRKEGGWGPA*ARWCGLGLICW
Trigger: CCAGCAGATAAGGCCGAGCCCACACCATCTGGCCCAGGCTGGCCCCCACCCACCTTCCTTGCGACCACCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 72 bp GGCCTTATCTGCTGGAGTGGGGAGGTGGCGGGGGCATaGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCC +
Preference number: 3 (lower is better)
Translates to: GLICWSGEVAGA*RSSLTKPALSS
Trigger: GGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACCTCCCCACTCCAGCAGATAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 72 bp CTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTaGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCC +
Preference number: 3 (lower is better)
Translates to: LSHKACSVFPGS*ALGISVAAFLP
Trigger: GGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR CCA 72 bp GTACATTTATTTACAAGGCACAAGCTGAGAGCAGACTaGAGGCTGCCCCATGGCCTTCCTAATTCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: VHLFTRHKLRAD*RLPHGLPNSPG
Trigger: CCCAGGAGAATTAGGAAGGCCATGGGGCAGCCTCCAGTCTGCTCTCAGCTTGTGCCTTGTAAATAAATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
3UTR TCA 72 bp ACATCCAACCTGTACATTTATTTACAAGGCACAAGCTaGGAGCAGACTGGAGGCTGCCCCATGGCCTTCCTA +
Preference number: 3 (lower is better)
Translates to: TSNLYIYLQGTS*EQTGGCPMAFL
Trigger: TAGGAAGGCCATGGGGCAGCCTCCAGTCTGCTCTCAGCTTGTGCCTTGTAAATAAATGTACAGGTTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS-3UTR CCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCGGGGCCCCGAGTGGTTaGGTTGGGCCGGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSGAPSG*VGPAWP
Trigger: GGGCCAAGCCGGCCCAACCCAACCACTCGGGGCCCC...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCAGGGATTGGGCCGGGTaGGCAGAGGCGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSRDWAG*AEAEAG
Trigger: CCCTGCCTCCGCCTCTGCCCACCCGGCCCAATCCCT...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGCACTGCATGGGGGCGTaGGGAGCCCCGAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: REPGAASTGAWSLGCGRQHCMGA*GAPSLP
Trigger: TGGGAGGCTCGGGGCTCCCCACGCCCCCATGCAGTG...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGGGGTGGGGGCCAGCCTaGGCCAGATGGTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: REPGAASTGAWSLGCGRQGWGPA*ARWCGL
Trigger: GAGCCCACACCATCTGGCCCAGGCTGGCCCCCACCC...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCAGCTCCACCATGCGGTaGGGGAAGGGGGCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSSSTMR*GKGAGG
Trigger: ACCTCCGGCCCCCTTCCCTCACCGCATGGTGGAGCT...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGAGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACCTGTCTCCCAGCGGCTaGTCAGGAGCAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GGNRERLQRGPGVWGVADLSPSG*SGAVLG
Trigger: GCCCAGGACTGCTCCTGAGCAGCCGCTGGGAGACAG...GTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGAGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACCAGGTGAGCCCCTCCTaGCTGCTGCTTGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GGNRERLQRGPGVWGVADQVSPS*LLLGPL
Trigger: CAGAGGGCCAAGCAGCAGCCAGGAGGGGCTCACCTG...GTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCCTGCCTTGGCTGGCCTaGGATCCGTGGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSLPWLA*DPWGCG
Trigger: CCCACAGCCCCACGGATCCCAGGCCAGCCAAGGCAG...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGCCACCAGGCCTGGGCTaGGCGCCCTCTCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: REPGAASTGAWSLGCGRQPPGLG*APSLSH
Trigger: GTGTGAGAGAGAGGGCGCCCAGCCCAGGCCTGGTGG...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGAGGGCCGGCTTGGCCCTaGGGCAAGCTCGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRGPAWP*GKLGGG
Trigger: ACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCC...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCAGGGCCGGCTTGGCCCTaGGGCAAGCTCGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSGPAWP*GKLGGG
Trigger: ACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCC...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGGAGGGGCAACCTGGTTaGCGTCTGTCTCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: REPGAASTGAWSLGCGRQEGQPG*RLSPSG
Trigger: GCCGCTGGGAGACAGACGGCAACCAGGTTGCCCCTC...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCTCCTCAGCTCCACCATaGGGTGAGGGAAGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSSSAPP*GEGRGP
Trigger: CGGCCCCCTTCCCTCACCGCATGGTGGAGCTGAGGA...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCGGTGTCGCAGTCTGCTaGGGCAGGGCTGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGGVAVC*GRAAGG
Trigger: GCCCCCGGCAGCCCTGCCCCAGCAGACTGCGACACC...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGAGGTGTCGCAGTCTGCTaGGGCAGGGCTGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRGVAVC*GRAAGG
Trigger: GCCCCCGGCAGCCCTGCCCCAGCAGACTGCGACACC...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACCACTGCATGGGGGCGTaGGGAGCCCCGAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHHCMGA*GAPSLP
Trigger: TGGGAGGCTCGGGGCTCCCCACGCCCCCATGCAGTG...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCGCCCCGGCCACTGTGTaGCTGCGTCCAGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFAPATV*LRPGFS
Trigger: GCTGAAGCCTGGACGCAGCCACACAGTGGCCGGGGC...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCCCAGCCTGGGCCAGATaGTGTGGGCTCGGCCTTATC +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSPAWAR*CGLGLI
Trigger: GATAAGGCCGAGCCCACACCATCTGGCCCAGGCTGG...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCGGGTGGGGGCCAGCCTaGGCCAGATGGTGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGGWGPA*ARWCGL
Trigger: GAGCCCACACCATCTGGCCCAGGCTGGCCCCCACCC...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTGGTCGCAAGGAAGGTaGGTGGGGGCCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSWSQGR*VGASLG
Trigger: GCCCAGGCTGGCCCCCACCCACCTTCCTTGCGACCA...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTCCACCAGGCCTGGGCTaGGCGCCCTCTCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSPPGLG*APSLSH
Trigger: GTGTGAGAGAGAGGGCGCCCAGCCCAGGCCTGGTGG...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGAGGCAAGCTCGGGGGTaGTCTCCTGTGTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: REPGAASTGAWSLGCGRQRQARG*SPVSLG
Trigger: GCCAAGGGACACAGGAGACCACCCCCGAGCTTGCCT...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCCCCGAGTGGTTGGGTTaGGCCGGCTTGGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFPEWLG*AGLALR
Trigger: CCTCAGGGCCAAGCCGGCCCAACCCAACCACTCGGG...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGGGGGCCCCGAGTGGTTaGGTTGGGCCGGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGGAPSG*VGPAWP
Trigger: GGGCCAAGCCGGCCCAACCCAACCACTCGGGGCCCC...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGAAGCTCCACCATGCGGTaGGGGAAGGGGGCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRSSTMR*GKGAGG
Trigger: ACCTCCGGCCCCCTTCCCTCACCGCATGGTGGAGCT...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACCTGTCTCCCAGCGGCTaGTCAGGAGCAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHLSPSG*SGAVLG
Trigger: GCCCAGGACTGCTCCTGAGCAGCCGCTGGGAGACAG...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCGCCAGGGTCTTTCCCTaGAGCCAGGGGTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSARVFP*SQGSFT
Trigger: GGTGAAAGACCCCTGGCTGCAGGGAAAGACCCTGGC...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACGCCCCTCCTGGCTGCTaGTTGGCCCTCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHAPPGC*LALCCL
Trigger: AAGGCAGCAGAGGGCCAAGCAGCAGCCAGGAGGGGC...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCGGACAGCTGGGGCTATaGAGAAAGGCAGGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSGQLGL*RKAGEP
Trigger: GGGCTCACCTGCCTTTCTGCATAGCCCCAGCTGTCC...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGGGACAGCTGGGGCTATaGAGAAAGGCAGGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: REPGAASTGAWSLGCGRQGQLGL*RKAGEP
Trigger: GGGCTCACCTGCCTTTCTGCATAGCCCCAGCTGTCC...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCCTCAGCTCCACCATaGGGTGAGGGAAGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSSSAPP*GEGRGP
Trigger: CGGCCCCCTTCCCTCACCGCATGGTGGAGCTGAGGA...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACGGGCTCGGCCTTATCTaGTGGAGTGGGGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHGLGLI*WSGEVA
Trigger: CGCCACCTCCCCACTCCAGCAGATAAGGCCGAGCCC...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTGGGCTCGGCCTTATCTaGTGGAGTGGGGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSGLGLI*WSGEVA
Trigger: CGCCACCTCCCCACTCCAGCAGATAAGGCCGAGCCC...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCGAGGTGGCGGGGGCATaGAGGTCCTCTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSEVAGA*RSSLTK
Trigger: CTTTGTGAGAGAGGACCTCCATGCCCCCGCCACCTC...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACGCTGGAGTGGGGAGGTaGCGGGGGCATGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHAGVGR*RGHGGP
Trigger: AGGACCTCCATGCCCCCGCCACCTCCCCACTCCAGC...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCCTCGGCCTTATCTGCTaGAGTGGGGAGGTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFLGLIC*SGEVAG
Trigger: CCCCGCCACCTCCCCACTCCAGCAGATAAGGCCGAG...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCAGATGGGGGCCCCGAGTaGTTGGGTTGGGCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSDGGPE*LGWAGL
Trigger: CAAGCCGGCCCAACCCAACCACTCGGGGCCCCCATC...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCCTCGTCTGGCTGCAGTaGGACAGGAAGCCGAGGCCT +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFLVWLQ*DRKPRP
Trigger: AGGCCTCGGCTTCCTGTCTCACTGCAGCCAGACGAG...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS-3UTR TCA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGACCATCCCCTTTCTCTaGGGCAGGGGCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: REPGAASTGAWSLGCGRQTIPFL*GRGFGI
Trigger: GATGCCAAAGCCCCTGCCTCAGAGAAAGGGGATGGT...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGAGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACCATGCAGGTACAGACTaGCCCAAACTTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GGNRERLQRGPGVWGVADHAGTD*PKLATS
Trigger: GGAGGTGGCAAGTTTGGGGCAGTCTGTACCTGCATG...GTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCCTTGATGACCTTGGCTaGCAGCTTGAGGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSLDDLG*QLEACG
Trigger: GCCACAGGCCTCAAGCTGGCAGCCAAGGTCATCAAG...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCGGCCACTGTGTGGCTaGGTCCAGGCTTCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHRPLCG*VQASAA
Trigger: CGCAGCTGAAGCCTGGACGCAGCCACACAGTGGCCG...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCCGGCCACTGTGTGGCTaGGTCCAGGCTTCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSRPLCG*VQASAA
Trigger: CGCAGCTGAAGCCTGGACGCAGCCACACAGTGGCCG...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGACTGGCCTGGGATCCGTaGGGCTGTGGGTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRLAWDP*GCGSWA
Trigger: TGCCCATGACCCACAGCCCCACGGATCCCAGGCCAG...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCCTGGCCTGGGATCCGTaGGGCTGTGGGTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGLAWDP*GCGSWA
Trigger: TGCCCATGACCCACAGCCCCACGGATCCCAGGCCAG...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGCTGCCTTGGCTGGCCTaGGATCCGTGGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGLPWLA*DPWGCG
Trigger: CCCACAGCCCCACGGATCCCAGGCCAGCCAAGGCAG...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCGAAGGGGGCCGGAGGTaGCGGGCAATCATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSEGGRR*RAIIQN
Trigger: ATTTTGGATGATTGCCCGCCACCTCCGGCCCCCTTC...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGAGGATGGGCGAGACACTaGGCAGCGTTCATCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRGWARH*AAFIRA
Trigger: GGCCCGGATGAACGCTGCCCAGTGTCTCGCCCATCC...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACGGATGGGCGAGACACTaGGCAGCGTTCATCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHGWARH*AAFIRA
Trigger: GGCCCGGATGAACGCTGCCCAGTGTCTCGCCCATCC...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACCCGAGCCTCCCAGCCTaGCACAGCCTTGTCCTAACG +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHPSLPA*HSLVLT
Trigger: CGTTAGGACAAGGCTGTGCCAGGCTGGGAGGCTCGG...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCCCGAGCCTCCCAGCCTaGCACAGCCTTGTCCTAACG +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFPSLPA*HSLVLT
Trigger: CGTTAGGACAAGGCTGTGCCAGGCTGGGAGGCTCGG...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCGGCTGGAGCCCTGTCTaGGGAGGTGCTAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFGWSPV*GGASRM
Trigger: CATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCC...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGAGCTTCAACGGGGGCCTaGAGTCTGGGGTGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRASTGA*SLGCGR
Trigger: TCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGC...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCGCTTCAACGGGGGCCTaGAGTCTGGGGTGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGASTGA*SLGCGR
Trigger: TCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGC...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTGCTGGAGTGGGGAGGTaGCGGGGGCATGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTAGVGR*RGHGGP
Trigger: AGGACCTCCATGCCCCCGCCACCTCCCCACTCCAGC...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGTGGTCGCAAGGAAGGTaGGTGGGGGCCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGWSQGR*VGASLG
Trigger: GCCCAGGCTGGCCCCCACCCACCTTCCTTGCGACCA...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTCCCGAGTGGTTGGGTTaGGCCGGCTTGGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTPEWLG*AGLALR
Trigger: CCTCAGGGCCAAGCCGGCCCAACCCAACCACTCGGG...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGGATGGGGGCCCCGAGTaGTTGGGTTGGGCCGGCTTG +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGDGGPE*LGWAGL
Trigger: CAAGCCGGCCCAACCCAACCACTCGGGGCCCCCATC...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCCCGAGGCCTGCTAACTaGGGGGAGAGAGGTACCTGG +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGPRPAN*GERGTW
Trigger: CCAGGTACCTCTCTCCCCTCAGTTAGCAGGCCTCGG...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS-3UTR TCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGCCTTGGCTGCTAGTTaGGGGTTGGGCCAGGGTACC +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSALAAS*GLGQGT
Trigger: GGTACCCTGGCCCAACCCTCAACTAGCAGCCAAGGC...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GGAGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACCCTCGATGTACTCCATaGACAGGACGATCTCATGCG +
Preference number: 4 (lower is better)
Translates to: GGNRERLQRGPGVWGVADPRCTP*TGRSHA
Trigger: CGCATGAGATCGTCCTGTTCATGGAGTACATCGAGG...GTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGGTCTTTGGCCTCGTCTaGTACGGCCTCAAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: REPGAASTGAWSLGCGRQVFGLV*YGLKGL
Trigger: GAGACCTTTGAGGCCGTATCAGACGAGGCCAAAGAC...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCGTCTTTGGCCTCGTCTaGTACGGCCTCAAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSVFGLV*YGLKGL
Trigger: GAGACCTTTGAGGCCGTATCAGACGAGGCCAAAGAC...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTCCTCTGCTGCCTTCTTaGCCACCCTGGGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSPLLPS*PPWAFQ
Trigger: CTGGAAAGCCCAGGGTGGGCAAGAAGGCAGCAGAGG...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTGCTGCTTGGCCCTCTaGTGCCTTCTTGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSCCLAL*CLLAHP
Trigger: AGGGTGGGCAAGAAGGCAGCAGAGGGCCAAGCAGCA...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCTGCTGCTTGGCCCTCTaGTGCCTTCTTGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFCCLAL*CLLAHP
Trigger: AGGGTGGGCAAGAAGGCAGCAGAGGGCCAAGCAGCA...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGGCCCCTCCTGGCTGCTaGTTGGCCCTCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGAPPGC*LALCCL
Trigger: AAGGCAGCAGAGGGCCAAGCAGCAGCCAGGAGGGGC...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGCAGTTGTAAGGGATTaGGCCGGGTGGGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSAVVRD*AGWAEA
Trigger: CGCCTCTGCCCACCCGGCCCAATCCCTTACAACTGC...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTCCTTCTTGCCCACCCTaGGCTTTCCAGGATCCTGGC +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSPSCPP*AFQDPG
Trigger: GCCAGGATCCTGGAAAGCCCAGGGTGGGCAAGAAGG...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGATCCGTGGGGCTGTaGGTCATGGGCACCCCTTCA +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSGSVGL*VMGTPS
Trigger: TGAAGGGGTGCCCATGACCCACAGCCCCACGGATCC...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCGGATCCGTGGGGCTGTaGGTCATGGGCACCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGGSVGL*VMGTPS
Trigger: TGAAGGGGTGCCCATGACCCACAGCCCCACGGATCC...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCTTCATCCGGGCCCTCTaGTCCTTGACGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSFIRAL*SLTMRL
Trigger: CAACCTCATCGTCAAGGACCAGAGGGCCCGGATGAA...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCGCTGCCCTGGGGATCTaGCTGCCTTTTCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFAALGI*LPFLAF
Trigger: GAAGGCCAGAAAAGGCAGCCAGATCCCCAGGGCAGC...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGCTGGAGCCCTGTCTaGGGAGGTGCTAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSGWSPV*GGASRM
Trigger: CATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCC...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTCTCGGCCTTATCTGCTaGAGTGGGGAGGTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTLGLIC*SGEVAG
Trigger: CCCCGCCACCTCCCCACTCCAGCAGATAAGGCCGAG...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCCCAGCCTGGGCCAGATaGTGTGGGCTCGGCCTTATC +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGPAWAR*CGLGLI
Trigger: GATAAGGCCGAGCCCACACCATCTGGCCCAGGCTGG...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCGTTCCTGTGTGTTGGTaGTCGCAAGGAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSVPVCW*SQGRWV
Trigger: CACCCACCTTCCTTGCGACCACCAACACACAGGAAC...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGGCAAGCTCGGGGGTaGTCTCCTGTGTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGRQARG*SPVSLG
Trigger: GCCAAGGGACACAGGAGACCACCCCCGAGCTTGCCT...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTGCCTTGGCTGCTAGTTaGGGGTTGGGCCAGGGTACC +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTALAAS*GLGQGT
Trigger: GGTACCCTGGCCCAACCCTCAACTAGCAGCCAAGGC...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCAGCCTTGGGCTTCTTaGCGCTGGTCTCAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHQPWAS*RWSQVS
Trigger: CGACACCTGAGACCAGCGTCAAGAAGCCCAAGGCTG...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCTCAGAACTGGAGATaGTGGCAGGACAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSSQNWR*WQDSWG
Trigger: GCCCCAGCTGTCCTGCCATCATCTCCAGTTCTGAGA...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCCGTCACAGATCTGCCTaGCAAACACCATGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSRHRSA*QTPWCP
Trigger: TGGACACCATGGTGTTTGTCAGGCAGATCTGTGACG...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCATTCACCACCTCAGGTaGCAGGAACTCTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFIHHLR*QELWGP
Trigger: GGGACCCCAGAGTTCCTGTCACCTGAGGTGGTGAAT...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTTCTCCGCCAGGTTGTTaGGCCAGGGATGGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTSPPGC*ARDGRD
Trigger: GTCTCGCCCATCCCTGGCTCAACAACCTGGCGGAGA...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATGAGGGGCAACCTGGTTaGCGTCTGTCTCCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHEGQPG*RLSPSG
Trigger: GCCGCTGGGAGACAGACGGCAACCAGGTTGCCCCTC...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACCCCTCTCGTCTGGCTaGAGTGAGACAGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSPLSSG*SETGSR
Trigger: TCGGCTTCCTGTCTCACTGCAGCCAGACGAGAGGGG...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS-3UTR GCA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCCTCTGCTGCCTTCTTaGCCACCCTGGGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHPLLPS*PPWAFQ
Trigger: CTGGAAAGCCCAGGGTGGGCAAGAAGGCAGCAGAGG...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGACTCGAGGTGTCCCCTTaGATCTTAGCCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRLEVSP*ILAWPA
Trigger: GGCTGGCCAGGCTAAGATGCAAGGGGACACCTCGAG...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGACCCTGGGGATCTGGCTaGCTTTTCTGGCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRPWGSG*LFWPSG
Trigger: CCCAGAAGGCCAGAAAAGGCAGCCAGATCCCCAGGG...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGAGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACCATCTTTCTTCAGGGTaGGTGGATCCGGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GGNRERLQRGPGVWGVADHLSSG*VDPELS
Trigger: AGAAAGCTCCGGATCCACCCACCCTGAAGAAAGATG...GTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATCAGGTGAGCCCCTCCTaGCTGCTGCTTGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHQVSPS*LLLGPL
Trigger: CAGAGGGCCAAGCAGCAGCCAGGAGGGGCTCACCTG...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCTGGCCAGCCTGGCCTaGGGTTTTCTCTCCCACTTC +
Preference number: 4 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHLASLA*GFLSHF
Trigger: GAAGTGGGAGAGAAAACCCCAGGCCAGGCTGGCCAG...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCATTAGCCTGGCCAGCCTaGCCTGGGGTTTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSLAWPA*PGVFSP
Trigger: GGGAGAGAAAACCCCAGGCCAGGCTGGCCAGGCTAA...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGATTAGCCTGGCCAGCCTaGCCTGGGGTTTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRLAWPA*PGVFSP
Trigger: GGGAGAGAAAACCCCAGGCCAGGCTGGCCAGGCTAA...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACGAAGGGGGCCGGAGGTaGCGGGCAATCATCCAAAAT +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHEGGRR*RAIIQN
Trigger: ATTTTGGATGATTGCCCGCCACCTCCGGCCCCCTTC...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGCCTTCAGCTTCTCGTTaGGGTTATACCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: REPGAASTGAWSLGCGRQPSASR*GYTSVP
Trigger: TGGCACGGAGGTATAACCCCAACGAGAAGCTGAAGG...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCCTGGGCCAGATGGTGTaGGCTCGGCCTTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSLGQMV*ARPYLL
Trigger: CAGCAGATAAGGCCGAGCCCACACCATCTGGCCCAG...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTAAGCTGAGAGCAGACTaGAGGCTGCCCCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSKLRAD*RLPHGL
Trigger: AAGGCCATGGGGCAGCCTCCAGTCTGCTCTCAGCTT...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTCATTTTCTGTCGCCATaGGGTAGGGAGGCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSHFLSP*GREACA
Trigger: AGCACACGCCTCCCTACCTCATGGCGACAGAAAATG...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGCAGCCTTGGGCTTCTTaGCGCTGGTCTCAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGQPWAS*RWSQVS
Trigger: CGACACCTGAGACCAGCGTCAAGAAGCCCAAGGCTG...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCTTCAAAGGTGAGCTCTaGTGCCTCGCTTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFFKGEL*CLAWGL
Trigger: AAGCCCCCAAGCGAGGCATCAGAGCTCACCTTTGAA...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCGGTTCAGCTGGTTCATaGCCTCAATCTCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSGSAGS*PQSPAT
Trigger: TGTTGCTGGAGATTGAGGTCATGAACCAGCTGAACC...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCAATTCACCACCTCAGGTaGCAGGAACTCTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSIHHLR*QELWGP
Trigger: GGGACCCCAGAGTTCCTGTCACCTGAGGTGGTGAAT...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATTCTCCGCCAGGTTGTTaGGCCAGGGATGGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHSPPGC*ARDGRD
Trigger: GTCTCGCCCATCCCTGGCTCAACAACCTGGCGGAGA...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCAGTGAGACAGAGGGCCTaGCCCACCTCGGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSVRQRA*PTSDFS
Trigger: AGAGAAATCCGAGGTGGGGCAGGCCCTCTGTCTCAC...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGTGAGACAGAGGGCCTaGCCCACCTCGGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSVRQRA*PTSDFS
Trigger: AGAGAAATCCGAGGTGGGGCAGGCCCTCTGTCTCAC...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCCTTGATGACCTTGGCTaGCAGCTTGAGGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGLDDLG*QLEACG
Trigger: GCCACAGGCCTCAAGCTGGCAGCCAAGGTCATCAAG...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGAGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACATGATCTTCACCAAATaGCCGGTGGTGTTGACACAC +
Preference number: 4 (lower is better)
Translates to: GGNRERLQRGPGVWGVADMIFTK*PVVLTH
Trigger: GTGTGTCAACACCACCGGGCATTTGGTGAAGATCAT...GTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGCCCTGGGGATCTGGCTaGCTTTTCTGGCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGPWGSG*LFWPSG
Trigger: CCCAGAAGGCCAGAAAAGGCAGCCAGATCCCCAGGG...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCCAAAGAGGGGCAACCTaGTTGCCGTCTGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSQRGAT*LPSVSQ
Trigger: CTGGGAGACAGACGGCAACCAGGTTGCCCCTCTTTG...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCCTGCTAGTTGAGGGTTaGGCCAGGGTACCATCCCCT +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSLLVEG*ARVPSP
Trigger: AGGGGATGGTACCCTGGCCCAACCCTCAACTAGCAG...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACTGCTAGTTGAGGGTTaGGCCAGGGTACCATCCCCT +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSLLVEG*ARVPSP
Trigger: AGGGGATGGTACCCTGGCCCAACCCTCAACTAGCAG...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACTCTGAGGGAACAGCCTaGAACTCAATCCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHSEGTA*NSIPLE
Trigger: CTCGAGGGGGATTGAGTTCCAGGCTGTTCCCTCAGA...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGAGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACCAATCATCCAAAATCTaGAAGCAGTCCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GGNRERLQRGPGVWGVADQSSKI*KQSSSL
Trigger: CAGGGAGGAGGACTGCTTCCAGATTTTGGATGATTG...GTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGTGGATCAGATTGCGGTaGTTCAGCTGGTTCATGACC +
Preference number: 4 (lower is better)
Translates to: REPGAASTGAWSLGCGRQWIRLR*FSWFMT
Trigger: GGTCATGAACCAGCTGAACCACCGCAATCTGATCCA...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTGCTGCCCTGGGGATCTaGCTGCCTTTTCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTAALGI*LPFLAF
Trigger: GAAGGCCAGAAAAGGCAGCCAGATCCCCAGGGCAGC...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGGAGGTGGCGGGGGCATaGAGGTCCTCTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGEVAGA*RSSLTK
Trigger: CTTTGTGAGAGAGGACCTCCATGCCCCCGCCACCTC...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTCTGGGCCAGATGGTGTaGGCTCGGCCTTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTLGQMV*ARPYLL
Trigger: CAGCAGATAAGGCCGAGCCCACACCATCTGGCCCAG...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCGTTCCTGTGTGTTGGTaGTCGCAAGGAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFVPVCW*SQGRWV
Trigger: CACCCACCTTCCTTGCGACCACCAACACACAGGAAC...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACATCATCTGAGGCCATaGGTGACCCCCAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSHHLRP*VTPKMG
Trigger: CCCCATCTTGGGGGTCACCCATGGCCTCAGATGATG...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACATTTTCTGTCGCCATaGGGTAGGGAGGCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSHFLSP*GREACA
Trigger: AGCACACGCCTCCCTACCTCATGGCGACAGAAAATG...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTACCATCCCCTTTCTCTaGGGCAGGGGCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTTIPFL*GRGFGI
Trigger: GATGCCAAAGCCCCTGCCTCAGAGAAAGGGGATGGT...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCTTCAAAGGTGAGCTCTaGTGCCTCGCTTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGFKGEL*CLAWGL
Trigger: AAGCCCCCAAGCGAGGCATCAGAGCTCACCTTTGAA...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTCCAGGCCAAAGTCAATaGTCTTCACCAAATGCCCGG +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSPGQSQ*SSPNAR
Trigger: CCGGGCATTTGGTGAAGATCATTGACTTTGGCCTGG...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCTTACAAGGCACAAGCTaGGAGCAGACTGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSLQGTS*EQTGGC
Trigger: GCAGCCTCCAGTCTGCTCTCAGCTTGTGCCTTGTAA...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATGCCAGGGTCTTTCCCTaGAGCCAGGGGTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHARVFP*SQGSFT
Trigger: GGTGAAAGACCCCTGGCTGCAGGGAAAGACCCTGGC...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATCTCGAGGTGTCCCCTTaGATCTTAGCCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHLEVSP*ILAWPA
Trigger: GGCTGGCCAGGCTAAGATGCAAGGGGACACCTCGAG...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACAACAGGACGATCTCATaGGGAGTCTCGATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHNRTIS*GVSMAA
Trigger: TGCAGCCATCGAGACTCCGCATGAGATCGTCCTGTT...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAACAGGACGATCTCATaGGGAGTCTCGATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFNRTIS*GVSMAA
Trigger: TGCAGCCATCGAGACTCCGCATGAGATCGTCCTGTT...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACCTTAGGAATCAGCGTTaGAGCCTTTCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHLRNQR*SLSAPP
Trigger: TGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAG...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCCTTAGGAATCAGCGTTaGAGCCTTTCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFLRNQR*SLSAPP
Trigger: TGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAG...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCGAGCAGACTGGAGGCTaGCCCATGGCCTTCCTAATT +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGEQTGG*PMAFLI
Trigger: AATTAGGAAGGCCATGGGGCAGCCTCCAGTCTGCTC...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACGCTCAGGAGCAGTCCTaGGCAGTTGTAAGGGATTGG +
Preference number: 4 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHAQEQS*AVVRDW
Trigger: CCAATCCCTTACAACTGCCCAGGACTGCTCCTGAGC...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS-3UTR CCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGACTGAGGCAGGGGCTTTaGCATCTTTCTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRLRQGL*HLSSGW
Trigger: CCACCCTGAAGAAAGATGCCAAAGCCCCTGCCTCAG...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACTCTCCTTTGGGGCCTTaGCTGCTAGTTGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHSPLGP*LLVEGW
Trigger: CCAACCCTCAACTAGCAGCCAAGGCCCCAAAGGAGA...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATCCTTCTTGCCCACCCTaGGCTTTCCAGGATCCTGGC +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHPSCPP*AFQDPG
Trigger: GCCAGGATCCTGGAAAGCCCAGGGTGGGCAAGAAGG...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCATTCATCCGGGCCCTCTaGTCCTTGACGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSFIRAL*SLTMRL
Trigger: CAACCTCATCGTCAAGGACCAGAGGGCCCGGATGAA...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTGAGGTGCTAGCAGGATaGATCCAGGCCACACTCCGA +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTEVLAG*IQATLR
Trigger: TCGGAGTGTGGCCTGGATCCATCCTGCTAGCACCTC...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTAGAGTTCCTGTGTGTTaGTGGTCGCAAGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSRVPVC*WSQGRW
Trigger: CCACCTTCCTTGCGACCACCAACACACAGGAACTCT...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGCATCATCTGAGGCCATaGGTGACCCCCAAGATGGGG +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGHHLRP*VTPKMG
Trigger: CCCCATCTTGGGGGTCACCCATGGCCTCAGATGATG...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTAGGTGCCTTGTCTGTTaGTGGGTTCTGAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSRCLVC*WVLNSQ
Trigger: CTGGGAATTCAGAACCCATCAACAGACAAGGCACCT...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATTCTCAGAACTGGAGATaGTGGCAGGACAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHSQNWR*WQDSWG
Trigger: GCCCCAGCTGTCCTGCCATCATCTCCAGTTCTGAGA...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCGGTTCAGCTGGTTCATaGCCTCAATCTCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFGSAGS*PQSPAT
Trigger: TGTTGCTGGAGATTGAGGTCATGAACCAGCTGAACC...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACCTCGATGTACTCCATaGACAGGACGATCTCATGCG +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSPRCTP*TGRSHA
Trigger: CGCATGAGATCGTCCTGTTCATGGAGTACATCGAGG...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCCGTCACAGATCTGCCTaGCAAACACCATGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGRHRSA*QTPWCP
Trigger: TGGACACCATGGTGTTTGTCAGGCAGATCTGTGACG...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCCCCTCATCTTGTGCATaGAGAGGATCCCGTCACAGA +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSPSSCA*RGSRHR
Trigger: TCTGTGACGGGATCCTCTTCATGCACAAGATGAGGG...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGACCCTCATCTTGTGCATaGAGAGGATCCCGTCACAGA +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRPSSCA*RGSRHR
Trigger: TCTGTGACGGGATCCTCTTCATGCACAAGATGAGGG...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTTTACAAGGCACAAGCTaGGAGCAGACTGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTLQGTS*EQTGGC
Trigger: GCAGCCTCCAGTCTGCTCTCAGCTTGTGCCTTGTAA...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCGGAGGCGTGTGCTGCTaGTTGTCTAACTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFGGVCC*LSNSSL
Trigger: AAGACTTGAGTTAGACAAGCAGCAGCACACGCCTCC...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGACTGTGGCTTTCTCCATaGAGGTACAGACTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRLWLSP*RYRLPQ
Trigger: TTGGGGCAGTCTGTACCTGCATGGAGAAAGCCACAG...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCTGTGGCTTTCTCCATaGAGGTACAGACTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHLWLSP*RYRLPQ
Trigger: TTGGGGCAGTCTGTACCTGCATGGAGAAAGCCACAG...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTCGGAGTCTCGATGGCTaGATACAGCTGGATCAGATT +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSRSLDG*IQLDQI
Trigger: AATCTGATCCAGCTGTATGCAGCCATCGAGACTCCG...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACCGGAGTCTCGATGGCTaGATACAGCTGGATCAGATT +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHRSLDG*IQLDQI
Trigger: AATCTGATCCAGCTGTATGCAGCCATCGAGACTCCG...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGCTTGAGGTCCAGGTaGAAAACCCTCATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSGLRSR*KTLILC
Trigger: GCACAAGATGAGGGTTTTGCACCTGGACCTCAAGCC...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGAGGCTTGAGGTCCAGGTaGAAAACCCTCATCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRGLRSR*KTLILC
Trigger: GCACAAGATGAGGGTTTTGCACCTGGACCTCAAGCC...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACGGGGTTATACCTCCGTaGCAGGCCAAAGTCAATGAT +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHGVIPP*QAKVND
Trigger: ATCATTGACTTTGGCCTGGCACGGAGGTATAACCCC...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTGAGCAGACTGGAGGCTaGCCCATGGCCTTCCTAATT +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTEQTGG*PMAFLI
Trigger: AATTAGGAAGGCCATGGGGCAGCCTCCAGTCTGCTC...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATGGGGAGAGAGGTACCTaGAGCAAAGAGGGGCAACCT +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHGERGT*SKEGQP
Trigger: AGGTTGCCCCTCTTTGCTCCAGGTACCTCTCTCCCC...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS-3UTR CCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTTTCTTCAGGGTGGGTaGATCCGGAGCTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSFLQGG*IRSFLW
Trigger: CCAAAGAAAGCTCCGGATCCACCCACCCTGAAGAAA...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCCATCTTTCTTCAGGGTaGGTGGATCCGGAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFHLSSG*VDPELS
Trigger: AGAAAGCTCCGGATCCACCCACCCTGAAGAAAGATG...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTCTGAGGCAGGGGCTTTaGCATCTTTCTTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTLRQGL*HLSSGW
Trigger: CCACCCTGAAGAAAGATGCCAAAGCCCCTGCCTCAG...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTTCTCCTTTGGGGCCTTaGCTGCTAGTTGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTSPLGP*LLVEGW
Trigger: CCAACCCTCAACTAGCAGCCAAGGCCCCAAAGGAGA...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCTGGATCAGATTGCGGTaGTTCAGCTGGTTCATGACC +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFWIRLR*FSWFMT
Trigger: GGTCATGAACCAGCTGAACCACCGCAATCTGATCCA...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACATGGCTGCATACAGCTaGATCAGATTGCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHMAAYS*IRLRWF
Trigger: GAACCACCGCAATCTGATCCAGCTGTATGCAGCCAT...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACCTTCAGCTTCTCGTTaGGGTTATACCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSPSASR*GYTSVP
Trigger: TGGCACGGAGGTATAACCCCAACGAGAAGCTGAAGG...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACTGGAGACAAAGTCTTTaGCCTCGTCTGATACGGCCT +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHWRQSL*PRLIRP
Trigger: AGGCCGTATCAGACGAGGCCAAAGACTTTGTCTCCA...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATGAGGTGCTAGCAGGATaGATCCAGGCCACACTCCGA +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHEVLAG*IQATLR
Trigger: TCGGAGTGTGGCCTGGATCCATCCTGCTAGCACCTC...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGGTCTTCCCTGGCAGCTaGGCCTTAGGAATCAGCGTT +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGVFPGS*ALGISV
Trigger: AACGCTGATTCCTAAGGCCCAGCTGCCAGGGAAGAC...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCAGAGTTCCTGTGTGTTaGTGGTCGCAAGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSRVPVC*WSQGRW
Trigger: CCACCTTCCTTGCGACCACCAACACACAGGAACTCT...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATAAGCTGAGAGCAGACTaGAGGCTGCCCCATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHKLRAD*RLPHGL
Trigger: AAGGCCATGGGGCAGCCTCCAGTCTGCTCTCAGCTT...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGAGGCGTGTGCTGCTaGTTGTCTAACTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSGGVCC*LSNSSL
Trigger: AAGACTTGAGTTAGACAAGCAGCAGCACACGCCTCC...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTTCCTTCTGGCTCTCTaGCAGGATGTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSFLLAL*QDVLSF
Trigger: GAAGGAAAGAACATCCTGGCAGAGAGCCAGAAGGAA...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATCATGCAGGTACAGACTaGCCCAAACTTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHHAGTD*PKLATS
Trigger: GGAGGTGGCAAGTTTGGGGCAGTCTGTACCTGCATG...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCATCCCGTCACAGATCTaGCTGACAAACACCATGGTG +
Preference number: 4 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSIPSQI*LTNTMV
Trigger: CACCATGGTGTTTGTCAGGCAGATCTGTGACGGGAT...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTATGATCTTCACCAAATaGCCGGTGGTGTTGACACAC +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSMIFTK*PVVLTH
Trigger: GTGTGTCAACACCACCGGGCATTTGGTGAAGATCAT...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATTCTGAGGGAACAGCCTaGAACTCAATCCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHSEGTA*NSIPLE
Trigger: CTCGAGGGGGATTGAGTTCCAGGCTGTTCCCTCAGA...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCATTGCGGTGGTTCAGCTaGTTCATGACCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSLRWFS*FMTSIS
Trigger: GGAGATTGAGGTCATGAACCAGCTGAACCACCGCAA...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGCATGCGGAGTCTCGATaGCTGCATACAGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGHAESR*LHTAGS
Trigger: TGATCCAGCTGTATGCAGCCATCGAGACTCCGCATG...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACTGGAGACAAAGTCTTTaGCCTCGTCTGATACGGCCT +
Preference number: 4 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHWRQSL*PRLIRP
Trigger: AGGCCGTATCAGACGAGGCCAAAGACTTTGTCTCCA...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCTCAAGTCTTTCTAGCTaGAGCAAAGAGGGGCAACCT +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFSSLSS*SKEGQP
Trigger: AGGTTGCCCCTCTTTGCTCCAGCTAGAAAGACTTGA...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375985.5
CDS-3UTR TCA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCATCTGTTGATGGGTTCTaGATTCCCAGCTCAACTGCT +
Preference number: 4 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSSVDGF*IPSSTA
Trigger: AGCAGTTGAGCTGGGAATTCAGAACCCATCAACAGA...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTAGGTGCCTTGTCTGTTaGTGGGTTCTGAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTRCLVC*WVLNSQ
Trigger: CTGGGAATTCAGAACCCATCAACAGACAAGGCACCT...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR TCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATCCAGGCCAAAGTCAATaGTCTTCACCAAATGCCCGG +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHPGQSQ*SSPNAR
Trigger: CCGGGCATTTGGTGAAGATCATTGACTTTGGCCTGG...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTAATTCCCAGCTCAACTaGTCCATTTTCTGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSNSQLN*SIFCRH
Trigger: ATGGCGACAGAAAATGGAGCAGTTGAGCTGGGAATT...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGATTCCTTCTGGCTCTCTaGCAGGATGTTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRFLLAL*QDVLSF
Trigger: GAAGGAAAGAACATCCTGGCAGAGAGCCAGAAGGAA...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GGAGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACCATCAAAGTACCAGTTaGCAGATAGAACGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: GGNRERLQRGPGVWGVADHQSTS*QIERCL
Trigger: TAAACAACGTTCTATCTGGCAACTGGTACTTTGATG...GTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTTTGCGGTGGTTCAGCTaGTTCATGACCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTLRWFS*FMTSIS
Trigger: GGAGATTGAGGTCATGAACCAGCTGAACCACCGCAA...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTATGGCTGCATACAGCTaGATCAGATTGCGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTMAAYS*IRLRWF
Trigger: GAACCACCGCAATCTGATCCAGCTGTATGCAGCCAT...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACTCAAGTCTTTCTAGCTaGAGAAACAAGAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHSSLSS*RNKSGV
Trigger: CACTCCACTCTTGTTTCTGCAGCTAGAAAGACTTGA...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS-3UTR GCA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATATCCCGTCACAGATCTaGCTGACAAACACCATGGTG +
Preference number: 4 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHIPSQI*LTNTMV
Trigger: CACCATGGTGTTTGTCAGGCAGATCTGTGACGGGAT...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCCATCAAAGTACCAGTTaGCAGATAGAACGTTGTTTA +
Preference number: 4 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSHQSTS*QIERCL
Trigger: TAAACAACGTTCTATCTGGCAACTGGTACTTTGATG...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGCAATCATCCAAAATCTaGAAGCAGTCCTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGQSSKI*KQSSSL
Trigger: CAGGGAGGAGGACTGCTTCCAGATTTTGGATGATTG...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCTTCTTAAGCAAGATCTaGGACTTAAGGCGTCGGTTA +
Preference number: 4 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFFLSKI*DLRRRL
Trigger: TAACCGACGCCTTAAGTCCCAGATCTTGCTTAAGAA...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CCA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACTTCTTAAGCAAGATCTaGGACTTAAGGCGTCGGTTA +
Preference number: 4 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHFLSKI*DLRRRL
Trigger: TAACCGACGCCTTAAGTCCCAGATCTTGCTTAAGAA...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR GCA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTAATTCCCAGCTCAACTaGTCCATTTTCTGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTNSQLN*SIFCRH
Trigger: ATGGCGACAGAAAATGGAGCAGTTGAGCTGGGAATT...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGAGAGGGGCAACCTGGTaGCCGTCTGTCTCCCAGCGG +
Preference number: 5 (lower is better)
Translates to: REPGAASTGAWSLGCGRQRGATW*PSVSQR
Trigger: CCGCTGGGAGACAGACGGCAACCAGGTTGCCCCTCT...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGCAGACTGCCCCAAACTaGCCACCTCCGAGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: REPGAASTGAWSLGCGRQQTAPN*PPPSAS
Trigger: GGAGGCGCTCGGAGGTGGCAAGTTTGGGGCAGTCTG...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCCCCCGAGTGGTTGGGTaGGGCCGGCTTGGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFPRVVG*GRLGPE
Trigger: CTCAGGGCCAAGCCGGCCCAACCCAACCACTCGGGG...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCTTGGGTTGGGCCGGCTaGGCCCTGAGGCAAGCTCGG +
Preference number: 5 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFLGWAG*ALRQAR
Trigger: CCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAA...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTTGGGTTGGGCCGGCTaGGCCCTGAGGCAAGCTCGG +
Preference number: 5 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSLGWAG*ALRQAR
Trigger: CCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAA...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGACCCCGAGTGGTTGGGTaGGGCCGGCTTGGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRPRVVG*GRLGPE
Trigger: CTCAGGGCCAAGCCGGCCCAACCCAACCACTCGGGG...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTAGAGGGGCAACCTGGTaGCCGTCTGTCTCCCAGCGG +
Preference number: 5 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSRGATW*PSVSQR
Trigger: CCGCTGGGAGACAGACGGCAACCAGGTTGCCCCTCT...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GGAGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACTCGCTTGGGGGCTTCTaGGCCAGCAGCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: GGNRERLQRGPGVWGVADSLGGF*ASSFSE
Trigger: TTCTGAGAAGCTGCTGGCCAAGAAGCCCCCAAGCGA...GTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS CCA 90 bp AACCTGGTTGCCGTCTGTCTCCCAGCGGCTGCTCAGGAGCAGTCCTaGGCAGTTGTAAGGGATTGGGCCGGGTGGGCAGAGGCGGAGGCA +
Preference number: 5 (lower is better)
Translates to: NLVAVCLPAAAQEQS*AVVRDWAGWAEAEA
Trigger: TGCCTCCGCCTCTGCCCACCCGGCCCAATCCCTTACAACTGCCCAGGACTGCTCCTGAGCAGCCGCTGGGAGACAGACGGCAACCAGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS-3UTR CAA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGAGGCAGTTGTAAGGGATaGGGCCGGGTGGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRGSCKG*GRVGRG
Trigger: GCCTCTGCCCACCCGGCCCAATCCCTTACAACTGCC...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS-3UTR CAA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCCTGTCACCCTCTCCTTaGGGGCCTTGGCTGCTAGTT +
Preference number: 5 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSLSPSP*GPWLLV
Trigger: AACTAGCAGCCAAGGCCCCAAAGGAGAGGGTGACAG...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACGCTCCCTGCTCAGCCTaGGGCTTCTTGACGCTGGTC +
Preference number: 5 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHAPCSA*GFLTLV
Trigger: GACCAGCGTCAAGAAGCCCAAGGCTGAGCAGGGAGC...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTGCTCCCTGCTCAGCCTaGGGCTTCTTGACGCTGGTC +
Preference number: 5 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSAPCSA*GFLTLV
Trigger: GACCAGCGTCAAGAAGCCCAAGGCTGAGCAGGGAGC...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCCCTCGAGGTGTCCCCTaGCATCTTAGCCTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFPRGVP*HLSLAS
Trigger: GCTGGCCAGGCTAAGATGCAAGGGGACACCTCGAGG...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTGCTTTCTCCGCCAGGTaGTTGAGCCAGGGATGGGCG +
Preference number: 5 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSAFSAR*LSQGWA
Trigger: CGCCCATCCCTGGCTCAACAACCTGGCGGAGAAAGC...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCGCTCTGATGCCTCGCTaGGGGGCTTCTTGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGALMPR*GASWPA
Trigger: TGCTGGCCAAGAAGCCCCCAAGCGAGGCATCAGAGC...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGACCTTCAGCTTCTCGTaGGGGTTATACCTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: REPGAASTGAWSLGCGRQTFSFS*GLYLRA
Trigger: GGCACGGAGGTATAACCCCAACGAGAAGCTGAAGGT...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS GCA 90 bp TGGAGCAAAGAGGGGCAACCTGGTTGCCGTCTGTCTCCCAGCGGCTaGTCAGGAGCAGTCCTGGGCAGTTGTAAGGGATTGGGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: WSKEGQPGCRLSPSG*SGAVLGSCKGLGRV
Trigger: CACCCGGCCCAATCCCTTACAACTGCCCAGGACTGCTCCTGAGCAGCCGCTGGGAGACAGACGGCAACCAGGTTGCCCCTCTTTGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS GCA 90 bp TTGCCCACCCTGGGCTTTCCAGGATCCTGGCTGCCTGAGGCTCCCTaGTCAGCCTTGGGCTTCTTGACGCTGGTCTCAGGTGTCGCAGTC +
Preference number: 5 (lower is better)
Translates to: LPTLGFPGSWLPEAP*SALGFLTLVSGVAV
Trigger: GACTGCGACACCTGAGACCAGCGTCAAGAAGCCCAAGGCTGAGCAGGGAGCCTCAGGCAGCCAGGATCCTGGAAAGCCCAGGGTGGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACTCGCTTGGGGGCTTCTaGGCCAGCAGCTTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHSLGGF*ASSFSE
Trigger: TTCTGAGAAGCTGCTGGCCAAGAAGCCCCCAAGCGA...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCTTTCCTTCTTCTGCCTaGGCTGGCCTGGGATCCGTG +
Preference number: 5 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFFPSSA*AGLGSV
Trigger: CACGGATCCCAGGCCAGCCAAGGCAGAAGAAGGAAA...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACTTTCCTTCTTCTGCCTaGGCTGGCCTGGGATCCGTG +
Preference number: 5 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHFPSSA*AGLGSV
Trigger: CACGGATCCCAGGCCAGCCAAGGCAGAAGAAGGAAA...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTCCTCGAGGTGTCCCCTaGCATCTTAGCCTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTPRGVP*HLSLAS
Trigger: GCTGGCCAGGCTAAGATGCAAGGGGACACCTCGAGG...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGTTGGGAGTCTGTTTCTaGATGACCTTGGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: REPGAASTGAWSLGCGRQLGVCF*MTLAAS
Trigger: GCTGGCAGCCAAGGTCATCAAGAAACAGACTCCCAA...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp CGAGTGGTTGGGTTGGGCCGGCTTGGCCCTGAGGCAAGCTCGGGGGTGGTCTCCTTGGAGACAAAGTCTTaGGCCTCGTCTGATACGGCC +
Preference number: 5 (lower is better)
Translates to: RVVGLGRLGPEASSGVVSLETKS*ASSDTA
Trigger: GGCCGTATCAGACGAGGCCAAAGACTTTGTCTCCAA...GGAGACCACCCCCGAGCTTGCCTCAGGGCCAAGCCGGCCCAACCCAACCACTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCTTCTCCGCCAGGTTGTaGAGCCAGGGATGGGCGAGA +
Preference number: 5 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSFSARL*SQGWAR
Trigger: TCTCGCCCATCCCTGGCTCAACAACCTGGCGGAGAA...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTGCTTTCTCCGCCAGGTaGTTGAGCCAGGGATGGGCG +
Preference number: 5 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTAFSAR*LSQGWA
Trigger: CGCCCATCCCTGGCTCAACAACCTGGCGGAGAAAGC...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGATCTTCTTGAAGCGGTaGGCAGCGCTGACAGCAATG +
Preference number: 5 (lower is better)
Translates to: REPGAASTGAWSLGCGRQIFLKR*AALTAM
Trigger: CATTGCTGTCAGCGCTGCCAACCGCTTCAAGAAGAT...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS CCA 90 bp CGGTTACAGCGTTTGGCTTTCTCCGCCAGGTTGTTGAGCCAGGGATaGGCGAGACACTGGGCAGCGTTCATCCGGGCCCTCTGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RLQRLAFSARLLSQG*ARHWAAFIRALWSL
Trigger: CAAGGACCAGAGGGCCCGGATGAACGCTGCCCAGTGTCTCGCCCATCCCTGGCTCAACAACCTGGCGGAGAAAGCCAAACGCTGTAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS-3UTR CAA 90 bp AGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCTGAGGCAGGGGCTTaGGCATCTTTCTTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RLRTLPVGQSRGHHGGGSSEAGA*ASFFRV
Trigger: CACCCTGAAGAAAGATGCCAAAGCCCCTGCCTCAGA...ACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCCTGTCACCCTCTCCTTaGGGGCCTTGGCTGCTAGTT +
Preference number: 5 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSLSPSP*GPWLLV
Trigger: AACTAGCAGCCAAGGCCCCAAAGGAGAGGGTGACAG...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCATCAGCCTTGGGCTTCTaGACGCTGGTCTCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSSALGF*TLVSGV
Trigger: GACACCTGAGACCAGCGTCAAGAAGCCCAAGGCTGA...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGGGAACCGGGAGCGGCTTCAACGGGGGCCTGGAGTCTGGGGTGTGGCCGACAGTGCAAAACCCTCATCTaGTGCATGAAGAGGATCCCG +
Preference number: 5 (lower is better)
Translates to: REPGAASTGAWSLGCGRQCKTLI*CMKRIP
Trigger: CGGGATCCTCTTCATGCACAAGATGAGGGTTTTGCA...CTGTCGGCCACACCCCAGACTCCAGGCCCCCGTTGAAGCCGCTCCCGGTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTTTCTCCGCCAGGTTGTaGAGCCAGGGATGGGCGAGA +
Preference number: 5 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTFSARL*SQGWAR
Trigger: TCTCGCCCATCCCTGGCTCAACAACCTGGCGGAGAA...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCGTCGGTTACAGCGTTaGGCTTTCTCCGCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHRRLQR*AFSARL
Trigger: CAACCTGGCGGAGAAAGCCAAACGCTGTAACCGACG...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCGAGCTGCTGATCTTCTaGAAGCGGTTGGCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGELLIF*KRLAAL
Trigger: CAGCGCTGCCAACCGCTTCAAGAAGATCAGCAGCTC...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCTCTGAGGCAGGGGCTTaGGCATCTTTCTTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSSEAGA*ASFFRV
Trigger: CACCCTGAAGAAAGATGCCAAAGCCCCTGCCTCAGA...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACTTGGGAGTCTGTTTCTaGATGACCTTGGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHLGVCF*MTLAAS
Trigger: GCTGGCAGCCAAGGTCATCAAGAAACAGACTCCCAA...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp ACAGGCTGGAGCCCTGTCTGGGGAGGTGCTAGCAGGATGGATCCAGGCCACACTCGTCGGTTACAGCGTTaGGCTTTCTCCGCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: TGWSPVWGGASRMDPGHTRRLQR*AFSARL
Trigger: CAACCTGGCGGAGAAAGCCAAACGCTGTAACCGACG...AGTGTGGCCTGGATCCATCCTGCTAGCACCTCCCCAGACAGGGCTCCAGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGGAGCTGCTGATCTTCTaGAAGCGGTTGGCAGCGCTG +
Preference number: 5 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGELLIF*KRLAAL
Trigger: CAGCGCTGCCAACCGCTTCAAGAAGATCAGCAGCTC...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGACAGAGTTCCTGTGTGTaGGTGGTCGCAAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRQSSCV*VVARKV
Trigger: CACCTTCCTTGCGACCACCAACACACAGGAACTCTG...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCTACAGCTGGATCAGATaGCGGTGGTTCAGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSYSWIR*RWFSWF
Trigger: GAACCAGCTGAACCACCGCAATCTGATCCAGCTGTA...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GGTGGCGGGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCTACAGCTGGATCAGATaGCGGTGGTTCAGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: GGGGMEVLSHKACSVFPGYSWIR*RWFSWF
Trigger: GAACCAGCTGAACCACCGCAATCTGATCCAGCTGTA...GCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCCCGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCTGCAAAACCCTCATCTaGTGCATGAAGAGGATCCCG +
Preference number: 5 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFCKTLI*CMKRIP
Trigger: CGGGATCCTCTTCATGCACAAGATGAGGGTTTTGCA...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGATTGGAGACAAAGTCTTaGGCCTCGTCTGATACGGCC +
Preference number: 5 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRLETKS*ASSDTA
Trigger: GGCCGTATCAGACGAGGCCAAAGACTTTGTCTCCAA...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACTCCTTGACGATGAGGTaGGAGACAAAGTCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHSLTMR*ETKSLA
Trigger: GGCCAAAGACTTTGTCTCCAACCTCATCGTCAAGGA...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCTCCTTGACGATGAGGTaGGAGACAAAGTCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFSLTMR*ETKSLA
Trigger: GGCCAAAGACTTTGTCTCCAACCTCATCGTCAAGGA...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATACCTTCAGCTTCTCGTaGGGGTTATACCTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHTFSFS*GLYLRA
Trigger: GGCACGGAGGTATAACCCCAACGAGAAGCTGAAGGT...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GGGGCATGGAGGTCCTCTCTCACAAAGCCTGCTCTGTCTTCCCTGGCAGCTGGGATCTTCTTGAAGCGGTaGGCAGCGCTGACAGCAATG +
Preference number: 5 (lower is better)
Translates to: GAWRSSLTKPALSSLAAGIFLKR*AALTAM
Trigger: CATTGCTGTCAGCGCTGCCAACCGCTTCAAGAAGAT...CCCAGCTGCCAGGGAAGACAGAGCAGGCTTTGTGAGAGAGGACCTCCATGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATCAGAGTTCCTGTGTGTaGGTGGTCGCAAGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHQSSCV*VVARKV
Trigger: CACCTTCCTTGCGACCACCAACACACAGGAACTCTG...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS CCA 90 bp AGGGTTGGGCCAGGGTACCATCCCCTTTCTCTGAGGCAGGGGCTTTaGCATCTTTCTTCAGGGTGGGTGGATCCGGAGCTTTCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: RVGPGYHPLSLRQGL*HLSSGWVDPELSLG
Trigger: ACCCAAAGAAAGCTCCGGATCCACCCACCCTGAAGAAAGATGCCAAAGCCCCTGCCTCAGAGAAAGGGGATGGTACCCTGGCCCAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCACCATTTCCTTGTCTTaGGGAGTCTGTTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: AKDSPSGAKQGSPRRRQFTISLS*GVCFLM
Trigger: CATCAAGAAACAGACTCCCAAAGACAAGGAAATGGT...GAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GGACTCTCCCAGTGGGGCAAAGCAGGGGTCACCACGGCGGCGGCAGTTCAAAGATTGCCAGATAGAACGTaGTTTAGGGTCTCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: GLSQWGKAGVTTAAAVQRLPDRT*FRVSVS
Trigger: TGACACAGAGACCCTAAACAACGTTCTATCTGGCAA...TCTTTGAACTGCCGCCGCCGTGGTGACCCCTGCTTTGCCCCACTGGGAGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCATTGCCAGATAGAACGTaGTTTAGGGTCTCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSLPDRT*FRVSVS
Trigger: TGACACAGAGACCCTAAACAACGTTCTATCTGGCAA...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp AGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCAACCATTTCCTTGTCTTaGGGAGTCTGTTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: SRMDPGHTPRRLTSGKRSTISLS*GVCFLM
Trigger: CATCAAGAAACAGACTCCCAAAGACAAGGAAATGGT...TGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GTGCTAGCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCTGTCTTATCGGAGATTaGGTCATAATTCACCACCTC +
Preference number: 5 (lower is better)
Translates to: VLAGWIQATLRGGSHRGSCLIGD*VIIHHL
Trigger: GAGGTGGTGAATTATGACCAAATCTCCGATAAGACA...GCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGCTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCAGGATGGATCCAGGCCACACTCCGAGGCGGCTCACATCGGGGAAGCGGTCACTCATCAAAGTACCAGTaGCCAGATAGAACGTTGTTT +
Preference number: 5 (lower is better)
Translates to: AGWIQATLRGGSHRGSGHSSKYQ*PDRTLF
Trigger: AAACAACGTTCTATCTGGCAACTGGTACTTTGATGA...GTGACCGCTTCCCCGATGTGAGCCGCCTCGGAGTGTGGCCTGGATCCATCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp GCTAGGAGGAGGCCCAGGCTAAGGACTCTCCCAGTGGGGCAAAGCAGGGGTCACTCATCAAAGTACCAGTaGCCAGATAGAACGTTGTTT +
Preference number: 5 (lower is better)
Translates to: ARRRPRLRTLPVGQSRGHSSKYQ*PDRTLF
Trigger: AAACAACGTTCTATCTGGCAACTGGTACTTTGATGA...GTGACCCCTGCTTTGCCCCACTGGGAGAGTCCTTAGCCTGGGCCTCCTCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS-3UTR CAA 90 bp CTGGGCCTTAGGAATCAGCGTTGCAGCCTTTCTGCCCCACCAGGAGCCTCCCATTGTCTTATCGGAGATTaGGTCATAATTCACCACCTC +
Preference number: 5 (lower is better)
Translates to: LGLRNQRCSLSAPPGASHCLIGD*VIIHHL
Trigger: GAGGTGGTGAATTATGACCAAATCTCCGATAAGACA...ATGGGAGGCTCCTGGTGGGGCAGAAAGGCTGCAACGCTGATTCCTAAGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS GCA 90 bp CACCATTTCCTTGTCTTTGGGAGTCTGTTTCTTGATGACCTTGGCTaGCAGCTTGAGGCCTGTGGCTTTCTCCATGCAGGTACAGACTGC +
Preference number: 5 (lower is better)
Translates to: HHFLVFGSLFLDDLG*QLEACGFLHAGTDC
Trigger: GCAGTCTGTACCTGCATGGAGAAAGCCACAGGCCTCAAGCTGGCAGCCAAGGTCATCAAGAAACAGACTCCCAAAGACAAGGAAATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS TCA 90 bp ATGGGTTCTGAATTCCCAGCTCAACTGCTCCATTTTCTGTCGCCATaGGGTAGGGAGGCGTGTGCTGCTGCTTGTCTAACTCAAGTCTTT +
Preference number: 5 (lower is better)
Translates to: MGSEFPAQLLHFLSP*GREACAAACLTQVF
Trigger: AAAGACTTGAGTTAGACAAGCAGCAGCACACGCCTCCCTACCTCATGGCGACAGAAAATGGAGCAGTTGAGCTGGGAATTCAGAACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS TCA 90 bp CTGGTCCTTGACGATGAGGTTGGAGACAAAGTCTTTGGCCTCGTCTaGTACGGCCTCAAAGGTCTCTTCATCAAAGTACCAGTTGCCAGA +
Preference number: 5 (lower is better)
Translates to: LVLDDEVGDKVFGLV*YGLKGLFIKVPVAR
Trigger: TCTGGCAACTGGTACTTTGATGAAGAGACCTTTGAGGCCGTATCAGACGAGGCCAAAGACTTTGTCTCCAACCTCATCGTCAAGGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS CCA 90 bp TTTTTCTTCCAGCGCCTCTTCATGAGGTATTTCTTAAGCAAGATCTaGGACTTAAGGCGTCGGTTACAGCGTTTGGCTTTCTCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: FFFQRLFMRYFLSKI*DLRRRLQRLAFSAR
Trigger: CCTGGCGGAGAAAGCCAAACGCTGTAACCGACGCCTTAAGTCCCAGATCTTGCTTAAGAAATACCTCATGAAGAGGCGCTGGAAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS GCA 90 bp CCTCGTCTGATACGGCCTCAAAGGTCTCTTCATCAAAGTACCAGTTaGCAGATAGAACGTTGTTTAGGGTCTCTGTGTCATCATCTCCCA +
Preference number: 5 (lower is better)
Translates to: PRLIRPQRSLHQSTS*QIERCLGSLCHHLP
Trigger: TGGGAGATGATGACACAGAGACCCTAAACAACGTTCTATCTGGCAACTGGTACTTTGATGAAGAGACCTTTGAGGCCGTATCAGACGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS GCA 72 bp TGGGCTGTGTGGCTTCAGCCCCGGCCACTGTGTGGCTaGGTCCAGGCTTCAGCTGCGCCCAGGGCTCAGACC +
Preference number: 6 (lower is better)
Translates to: WAVWLQPRPLCG*VQASAAPRAQT
Trigger: GGTCTGAGCCCTGGGCGCAGCTGAAGCCTGGACGCAGCCACACAGTGGCCGGGGCTGAAGCCACACAGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS CCA 72 bp GCCGTCTGTCTCCCAGCGGCTGCTCAGGAGCAGTCCTaGGCAGTTGTAAGGGATTGGGCCGGGTGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: AVCLPAAAQEQS*AVVRDWAGWAE
Trigger: CTCTGCCCACCCGGCCCAATCCCTTACAACTGCCCAGGACTGCTCCTGAGCAGCCGCTGGGAGACAGACGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS CCA 72 bp TCCGCCAGGTTGTTGAGCCAGGGATGGGCGAGACACTaGGCAGCGTTCATCCGGGCCCTCTGGTCCTTGACG +
Preference number: 6 (lower is better)
Translates to: SARLLSQGWARH*AAFIRALWSLT
Trigger: CGTCAAGGACCAGAGGGCCCGGATGAACGCTGCCCAGTGTCTCGCCCATCCCTGGCTCAACAACCTGGCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS CCA 72 bp AGGGGAGAGAGGTACCTGGAGCAAAGAGGGGCAACCTaGTTGCCGTCTGTCTCCCAGCGGCTGCTCAGGAGC +
Preference number: 6 (lower is better)
Translates to: RGERYLEQRGAT*LPSVSQRLLRS
Trigger: GCTCCTGAGCAGCCGCTGGGAGACAGACGGCAACCAGGTTGCCCCTCTTTGCTCCAGGTACCTCTCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS GCA 72 bp GAGGGGCAACCTGGTTGCCGTCTGTCTCCCAGCGGCTaGTCAGGAGCAGTCCTGGGCAGTTGTAAGGGATTG +
Preference number: 6 (lower is better)
Translates to: EGQPGCRLSPSG*SGAVLGSCKGL
Trigger: CAATCCCTTACAACTGCCCAGGACTGCTCCTGAGCAGCCGCTGGGAGACAGACGGCAACCAGGTTGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS GCA 72 bp GAGAGAGGTACCTGGAGCAAAGAGGGGCAACCTGGTTaGCGTCTGTCTCCCAGCGGCTGCTCAGGAGCAGTC +
Preference number: 6 (lower is better)
Translates to: ERGTWSKEGQPG*RLSPSGCSGAV
Trigger: GACTGCTCCTGAGCAGCCGCTGGGAGACAGACGGCAACCAGGTTGCCCCTCTTTGCTCCAGGTACCTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS CCA 72 bp CCCTCTCCTTTGGGGCCTTGGCTGCTAGTTGAGGGTTaGGCCAGGGTACCATCCCCTTTCTCTGAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: PSPLGPWLLVEG*ARVPSPFSEAG
Trigger: CCCTGCCTCAGAGAAAGGGGATGGTACCCTGGCCCAACCCTCAACTAGCAGCCAAGGCCCCAAAGGAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS CCA 72 bp CAGCTCCACCATGCGGTGAGGGAAGGGGGCCGGAGGTaGCGGGCAATCATCCAAAATCTGGAAGCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: QLHHAVREGGRR*RAIIQNLEAVL
Trigger: GAGGACTGCTTCCAGATTTTGGATGATTGCCCGCCACCTCCGGCCCCCTTCCCTCACCGCATGGTGGAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS CAA 72 bp GGAGAGAGGTACCTGGAGCAAAGAGGGGCAACCTGGTaGCCGTCTGTCTCCCAGCGGCTGCTCAGGAGCAGT +
Preference number: 6 (lower is better)
Translates to: GERYLEQRGATW*PSVSQRLLRSS
Trigger: ACTGCTCCTGAGCAGCCGCTGGGAGACAGACGGCAACCAGGTTGCCCCTCTTTGCTCCAGGTACCTCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375994.6
CDS CAA 90 bp GACTTAAGGCGTCGGTTACAGCGTTTGGCTTTCTCCGCCAGGTTGTaGAGCCAGGGATGGGCGAGACACTGGGCAGCGTTCATCCGGGCC +
Preference number: 6 (lower is better)
Translates to: DLRRRLQRLAFSARL*SQGWARHWAAFIRA
Trigger: GGCCCGGATGAACGCTGCCCAGTGTCTCGCCCATCCCTGGCTCAACAACCTGGCGGAGAAAGCCAAACGCTGTAACCGACGCCTTAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS TCA 72 bp GCTGTGGGTCATGGGCACCCCTTCAAAGGTGAGCTCTaGTGCCTCGCTTGGGGGCTTCTTGGCCAGCAGCTT +
Preference number: 6 (lower is better)
Translates to: AVGHGHPFKGEL*CLAWGLLGQQL
Trigger: AAGCTGCTGGCCAAGAAGCCCCCAAGCGAGGCATCAGAGCTCACCTTTGAAGGGGTGCCCATGACCCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS CAA 90 bp TGGGACTTAAGGCGTCGGTTACAGCGTTTGGCTTTCTCCGCCAGGTaGTTGAGCCAGGGATGGGCGAGACACTGGGCAGCGTTCATCCGG +
Preference number: 6 (lower is better)
Translates to: WDLRRRLQRLAFSAR*LSQGWARHWAAFIR
Trigger: CCGGATGAACGCTGCCCAGTGTCTCGCCCATCCCTGGCTCAACAACCTGGCGGAGAAAGCCAAACGCTGTAACCGACGCCTTAAGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS GCA 72 bp CTTGAGGCCTGTGGCTTTCTCCATGCAGGTACAGACTaGCCCAAACTTGCCACCTCCGAGCGCCTCCTTGGA +
Preference number: 6 (lower is better)
Translates to: LEACGFLHAGTD*PKLATSERLLG
Trigger: TCCAAGGAGGCGCTCGGAGGTGGCAAGTTTGGGGCAGTCTGTACCTGCATGGAGAAAGCCACAGGCCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS GCA 72 bp AGTCTTTCTAGCTGGAGCAAAGAGGGGCAACCTGGTTaGCGTCTGTCTCCCAGCGGCTGCTCAGGAGCAGTC +
Preference number: 6 (lower is better)
Translates to: SLSSWSKEGQPG*RLSPSGCSGAV
Trigger: GACTGCTCCTGAGCAGCCGCTGGGAGACAGACGGCAACCAGGTTGCCCCTCTTTGCTCCAGCTAGAAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375985.5
CDS CAA 72 bp GCCAGGGTACCATCCCCTTTCTCTGAGGCAGGGGCTTaGGCATCTTTCTTCAGGGTGGGTGGATCCGGAGCT +
Preference number: 6 (lower is better)
Translates to: ARVPSPFSEAGA*ASFFRVGGSGA
Trigger: AGCTCCGGATCCACCCACCCTGAAGAAAGATGCCAAAGCCCCTGCCTCAGAGAAAGGGGATGGTACCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS CAA 90 bp GAGGGTTGGGCCAGGGTACCATCCCCTTTCTCTGAGGCAGGGGCTTaGGCATCTTTCTTCAGGGTGGGTGGATCCGGAGCTTTCTTTGGG +
Preference number: 6 (lower is better)
Translates to: EGWARVPSPFSEAGA*ASFFRVGGSGAFFG
Trigger: CCCAAAGAAAGCTCCGGATCCACCCACCCTGAAGAAAGATGCCAAAGCCCCTGCCTCAGAGAAAGGGGATGGTACCCTGGCCCAACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS CAA 90 bp GGCACCCCTTCAAAGGTGAGCTCTGATGCCTCGCTTGGGGGCTTCTaGGCCAGCAGCTTCTCAGAACTGGAGATGATGGCAGGACAGCTG +
Preference number: 6 (lower is better)
Translates to: GTPSKVSSDASLGGF*ASSFSELEMMAGQL
Trigger: CAGCTGTCCTGCCATCATCTCCAGTTCTGAGAAGCTGCTGGCCAAGAAGCCCCCAAGCGAGGCATCAGAGCTCACCTTTGAAGGGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS CAA 90 bp CCCAGAGCCATCAGTGCCCCCGAGCTGCTGATCTTCTTGAAGCGGTaGGCAGCGCTGACAGCAATGAAGTTTTTCTTCCAGCGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: PRAISAPELLIFLKR*AALTAMKFFFQRLF
Trigger: GAAGAGGCGCTGGAAGAAAAACTTCATTGCTGTCAGCGCTGCCAACCGCTTCAAGAAGATCAGCAGCTCGGGGGCACTGATGGCTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS CAA 72 bp CCCAGAGCCATCAGTGCCCCCGAGCTGCTGATCTTCTaGAAGCGGTTGGCAGCGCTGACAGCAATGAAGTTT +
Preference number: 6 (lower is better)
Translates to: PRAISAPELLIF*KRLAALTAMKF
Trigger: AAACTTCATTGCTGTCAGCGCTGCCAACCGCTTCAAGAAGATCAGCAGCTCGGGGGCACTGATGGCTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS CAA 72 bp AGCAAGATCTGGGACTTAAGGCGTCGGTTACAGCGTTaGGCTTTCTCCGCCAGGTTGTTGAGCCAGGGATGG +
Preference number: 6 (lower is better)
Translates to: SKIWDLRRRLQR*AFSARLLSQGW
Trigger: CCATCCCTGGCTCAACAACCTGGCGGAGAAAGCCAAACGCTGTAACCGACGCCTTAAGTCCCAGATCTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS TCA 72 bp GAATTCCCAGCTCAACTGCTCCATTTTCTGTCGCCATaGGGTAGGGAGGCGTGTGCTGCTGCTTGTCTAACT +
Preference number: 6 (lower is better)
Translates to: EFPAQLLHFLSP*GREACAAACLT
Trigger: AGTTAGACAAGCAGCAGCACACGCCTCCCTACCTCATGGCGACAGAAAATGGAGCAGTTGAGCTGGGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS GCA 72 bp CTTGTCTTTGGGAGTCTGTTTCTTGATGACCTTGGCTaGCAGCTTGAGGCCTGTGGCTTTCTCCATGCAGGT +
Preference number: 6 (lower is better)
Translates to: LVFGSLFLDDLG*QLEACGFLHAG
Trigger: ACCTGCATGGAGAAAGCCACAGGCCTCAAGCTGGCAGCCAAGGTCATCAAGAAACAGACTCCCAAAGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375985.5
ENST00000375994.6
CDS GCA 72 bp CTCATCTTGTGCATGAAGAGGATCCCGTCACAGATCTaGCTGACAAACACCATGGTGTCCACCTCGGTCAGA +
Preference number: 6 (lower is better)
Translates to: LILCMKRIPSQI*LTNTMVSTSVR
Trigger: TCTGACCGAGGTGGACACCATGGTGTTTGTCAGGCAGATCTGTGACGGGATCCTCTTCATGCACAAGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS CAA 72 bp ATCAGTGCCCCCGAGCTGCTGATCTTCTTGAAGCGGTaGGCAGCGCTGACAGCAATGAAGTTTTTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: ISAPELLIFLKR*AALTAMKFFFQ
Trigger: CTGGAAGAAAAACTTCATTGCTGTCAGCGCTGCCAACCGCTTCAAGAAGATCAGCAGCTCGGGGGCACTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS CAA 90 bp TATTTCTTAAGCAAGATCTGGGACTTAAGGCGTCGGTTACAGCGTTaGGCTTTCTCCGCCAGGTTGTTGAGCCAGGGATGGGCGAGACAC +
Preference number: 6 (lower is better)
Translates to: YFLSKIWDLRRRLQR*AFSARLLSQGWARH
Trigger: GTGTCTCGCCCATCCCTGGCTCAACAACCTGGCGGAGAAAGCCAAACGCTGTAACCGACGCCTTAAGTCCCAGATCTTGCTTAAGAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS CAA 72 bp CTCTGGTCCTTGACGATGAGGTTGGAGACAAAGTCTTaGGCCTCGTCTGATACGGCCTCAAAGGTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: LWSLTMRLETKS*ASSDTASKVSS
Trigger: TGAAGAGACCTTTGAGGCCGTATCAGACGAGGCCAAAGACTTTGTCTCCAACCTCATCGTCAAGGACCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS CAA 90 bp GCCTCGTCTGATACGGCCTCAAAGGTCTCTTCATCAAAGTACCAGTaGCCAGATAGAACGTTGTTTAGGGTCTCTGTGTCATCATCTCCC +
Preference number: 6 (lower is better)
Translates to: ASSDTASKVSSSKYQ*PDRTLFRVSVSSSP
Trigger: GGGAGATGATGACACAGAGACCCTAAACAACGTTCTATCTGGCAACTGGTACTTTGATGAAGAGACCTTTGAGGCCGTATCAGACGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS TCA 72 bp GACGATGAGGTTGGAGACAAAGTCTTTGGCCTCGTCTaGTACGGCCTCAAAGGTCTCTTCATCAAAGTACCA +
Preference number: 6 (lower is better)
Translates to: DDEVGDKVFGLV*YGLKGLFIKVP
Trigger: TGGTACTTTGATGAAGAGACCTTTGAGGCCGTATCAGACGAGGCCAAAGACTTTGTCTCCAACCTCATCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS CCA 72 bp CAGCGCCTCTTCATGAGGTATTTCTTAAGCAAGATCTaGGACTTAAGGCGTCGGTTACAGCGTTTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: QRLFMRYFLSKI*DLRRRLQRLAF
Trigger: GAAAGCCAAACGCTGTAACCGACGCCTTAAGTCCCAGATCTTGCTTAAGAAATACCTCATGAAGAGGCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS CAA 72 bp GATACGGCCTCAAAGGTCTCTTCATCAAAGTACCAGTaGCCAGATAGAACGTTGTTTAGGGTCTCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: DTASKVSSSKYQ*PDRTLFRVSVS
Trigger: TGACACAGAGACCCTAAACAACGTTCTATCTGGCAACTGGTACTTTGATGAAGAGACCTTTGAGGCCGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1
CDS GCA 72 bp ATACGGCCTCAAAGGTCTCTTCATCAAAGTACCAGTTaGCAGATAGAACGTTGTTTAGGGTCTCTGTGTCAT +
Preference number: 6 (lower is better)
Translates to: IRPQRSLHQSTS*QIERCLGSLCH
Trigger: ATGACACAGAGACCCTAAACAACGTTCTATCTGGCAACTGGTACTTTGATGAAGAGACCTTTGAGGCCGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375985.5
ENST00000375994.6
ENST00000468730.1