RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYLK (Homo sapiens)

Ensembl gene IDs: ENSG00000065534

Ensembl transcript IDs: ENST00000346322.9, ENST00000360304.8, ENST00000360772.7, ENST00000418370.6, ENST00000464489.5, ENST00000503644.1, ENST00000504946.5, ENST00000506361.5, ENST00000508240.1, ENST00000510571.1, ENST00000510775.5, ENST00000513111.1, ENST00000514623.1, ENST00000515434.1, ENST00000578202.1, ENST00000583087.5

Found 1465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTCTGCGGGGCCGTTCTGGGCGAGTCCTTGCATGACTCCAGCTTaGACTCCCTTGGGGGCTGAGGCTGGCTGTTTGCAGCCCAGGGTG +
Preference number: 1 (lower is better)
Translates to: GSAGPFWASPCMTPA*TPLGAEAGCLQPRV
Trigger: CACCCTGGGCTGCAAACAGCCAGCCTCAGCCCCCAAGGGAGTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAACGGCCCCGCAGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 90 bp GGCCTGGTGCTCTTGGTTCCGGCTGAACTCTTGCGGCCTGCAGGGTaGTGGAGCTGGAAGTCTTCTGAAGGACCGGGGTCTGCGGGGCCG +
Preference number: 1 (lower is better)
Translates to: GLVLLVPAELLRPAG*WSWKSSEGPGSAGP
Trigger: CGGCCCCGCAGACCCCGGTCCTTCAGAAGACTTCCAGCTCCATCACCCTGCAGGCCGCAAGAGTTCAGCCGGAACCAAGAGCACCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 90 bp GCAGTGTGTAGCAGCCGCAGTGCTCCTGGCGCGCGGCCAGGATGGTaGGCTTGCTGCCATTCTCGCTGTTCTCCACCTTCATGTGCTCGC +
Preference number: 1 (lower is better)
Translates to: AVCSSRSAPGARPGW*ACCHSRCSPPSCAR
Trigger: GCGAGCACATGAAGGTGGAGAACAGCGAGAATGGCAGCAAGCTCACCATCCTGGCCGCGCGCCAGGAGCACTGCGGCTGCTACACACTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp GGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTaGTCCGGGCTTTCAGCAGGCAGAGGTAATGGGAGCCAGCATCTT +
Preference number: 1 (lower is better)
Translates to: GLGRWKQCSCMSHCP*SGLSAGRGNGSQHL
Trigger: AAGATGCTGGCTCCCATTACCTCTGCCTGCTGAAAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp GCAAGCCTTTCCACTTGGAGGGTCCAGCTACAGGACAGCTGGCCTTaGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGTC +
Preference number: 1 (lower is better)
Translates to: ASLSTWRVQLQDSWP*ALEAVQLYVPLSLV
Trigger: GACCAGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAGCTGGACCCTCCAAGTGGAAAGGCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp ATCACGGCAAGCCTTTCCACTTGGAGGGTCCAGCTACAGGACAGCTaGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCC +
Preference number: 1 (lower is better)
Translates to: ITASLSTWRVQLQDS*PWALEAVQLYVPLS
Trigger: GGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAGCTGGACCCTCCAAGTGGAAAGGCTTGCCGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 90 bp GCAGGCAGAGGTAATGGGAGCCAGCATCTTCATAAACCTCAATGCTaGCTTCCTGTCTCCTCACGGGGGTGCCTTCCAGGAACCAGGCCA +
Preference number: 1 (lower is better)
Translates to: AGRGNGSQHLHKPQC*LPVSSRGCLPGTRP
Trigger: TGGCCTGGTTCCTGGAAGGCACCCCCGTGAGGAGACAGGAAGGCAGCATTGAGGTTTATGAAGATGCTGGCTCCCATTACCTCTGCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp CTGGCTGGAGCATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTaGCCAGCGTCATTCTTGGCTACACACTTGTATAAGCCTCTGTCC +
Preference number: 1 (lower is better)
Translates to: LAGASSTVTWQEHSA*PASFLATHLYKPLS
Trigger: GGACAGAGGCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGATGCTCCAGCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp CAGTCGCATCACTCTCAGTTCCTAGCACGGGAGGAAGAGAGCTCTTaGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTGG +
Preference number: 1 (lower is better)
Translates to: QSHHSQFLAREEESS*ASGISSLGPWCSHW
Trigger: CCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCTCTTCCTCCCGTGCTAGGAACTGAGAGTGATGCGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 90 bp TGCACGATGCCCTGCTTGTGGATGTACTCCACTCCCTCCGAGATCTaGCGCATGTACTTGATGCACTCACGCTCCGTCAGCTCAAAGTCC +
Preference number: 1 (lower is better)
Translates to: CTMPCLWMYSTPSEI*RMYLMHSRSVSSKS
Trigger: GGACTTTGAGCTGACGGAGCGTGAGTGCATCAAGTACATGCGGCAGATCTCGGAGGGAGTGGAGTACATCCACAAGCAGGGCATCGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 90 bp CCCGTCCTCATCGTAGTCTATCTGGAAGTGGCGGGACTCCCTGATTaGCTGGTCATCTTTGAACCAGACAACCTCGGGGTCTGGGTATCC +
Preference number: 1 (lower is better)
Translates to: PVLIVVYLEVAGLPD*LVIFEPDNLGVWVS
Trigger: GGATACCCAGACCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAATCAGGGAGTCCCGCCACTTCCAGATAGACTACGATGAGGACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 90 bp TGTTGGCTGAGTCCCAGATCTCGATGCTGTAGGACTGTACAGCACTaGCCCCATCATATGAGGAGCCATACCAGGACAGGGTCAGTGAGG +
Preference number: 1 (lower is better)
Translates to: CWLSPRSRCCRTVQH*PHHMRSHTRTGSVR
Trigger: CCTCACTGACCCTGTCCTGGTATGGCTCCTCATATGATGGGGGCAGTGCTGTACAGTCCTACAGCATCGAGATCTGGGACTCAGCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 90 bp TCCTGGATCTGCTTTCGGAACTTCATCCAGGTACAGGTGATGGGCTaGGTGCCTGTCACTTTGCCAAACAGCTCCACTGACTCTCCTGCG +
Preference number: 1 (lower is better)
Translates to: SWICFRNFIQVQVMG*VPVTLPNSSTDSPA
Trigger: CGCAGGAGAGTCAGTGGAGCTGTTTGGCAAAGTGACAGGCACTCAGCCCATCACCTGTACCTGGATGAAGTTCCGAAAGCAGATCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 90 bp CATCTTCATAAACCTCAATGCTGCCTTCCTGTCTCCTCACGGGGGTaGCTTCCAGGAACCAGGCCACTTCAGGCTTTGGAATCCCGGAAA +
Preference number: 1 (lower is better)
Translates to: HLHKPQCCLPVSSRG*LPGTRPLQALESRK
Trigger: TTTCCGGGATTCCAAAGCCTGAAGTGGCCTGGTTCCTGGAAGGCACCCCCGTGAGGAGACAGGAAGGCAGCATTGAGGTTTATGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp GATGCTTTGCTCACTTGCCCACTGCTAACCTCCTTATGTGTGACCTaGTTCCTAACAGGCTACTTACCGGGGGTTGGGGACACCTGCTCT +
Preference number: 1 (lower is better)
Translates to: DALLTCPLLTSLCVT*FLTGYLPGVGDTCS
Trigger: AGAGCAGGTGTCCCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAGCAGTGGGCAAGTGAGCAAAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR CCA 90 bp GTAGCCGATGGGCTCATAGTTGATCACTTCAGGAGCCACAAATTCTaGGGTGCCAAAGAGGACCTTCAGAGACCCCGCATTCTCCAGCCT +
Preference number: 1 (lower is better)
Translates to: VADGLIVDHFRSHKF*GAKEDLQRPRILQP
Trigger: AGGCTGGAGAATGCGGGGTCTCTGAAGGTCCTCTTTGGCACCCCAGAATTTGTGGCTCCTGAAGTGATCAACTATGAGCCCATCGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 90 bp GTACACGGAACTTATATTCGTGGTCAGGCAGCAGGTCCTGGACGTTaGAAGAGGTGCTGCGGCATGTGGCTAGTTCCTTCCACGTCTTGT +
Preference number: 1 (lower is better)
Translates to: VHGTYIRGQAAGPGR*KRCCGMWLVPSTSC
Trigger: ACAAGACGTGGAAGGAACTAGCCACATGCCGCAGCACCTCTTTCAACGTCCAGGACCTGCTGCCTGACCACGAATATAAGTTCCGTGTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 90 bp GTCGGAGATCTCATCGAATGCCTCGTCGTCGAAGTCCCAGGTGGCTaGGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAA +
Preference number: 1 (lower is better)
Translates to: VGDLIECLVVEVPGG*GNVGQGFVIVVSHE
Trigger: TTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCACCTGGGACTTCGACGACGAGGCATTCGATGAGATCTCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 90 bp TGGCTAGTTCCTTCCACGTCTTGTTGGCTGAGTCCCAGATCTCGATaGTGTAGGACTGTACAGCACTGCCCCCATCATATGAGGAGCCAT +
Preference number: 1 (lower is better)
Translates to: WLVPSTSCWLSPRSR*CRTVQHCPHHMRSH
Trigger: ATGGCTCCTCATATGATGGGGGCAGTGCTGTACAGTCCTACAGCATCGAGATCTGGGACTCAGCCAACAAGACGTGGAAGGAACTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp ATTGCACGTACACGGAACTTATATTCGTGGTCAGGCAGCAGGTCCTaGACGTTGAAAGAGGTGCTGCGGCATGTGGCTAGTTCCTTCCAC +
Preference number: 1 (lower is better)
Translates to: IARTRNLYSWSGSRS*TLKEVLRHVASSFH
Trigger: GTGGAAGGAACTAGCCACATGCCGCAGCACCTCTTTCAACGTCCAGGACCTGCTGCCTGACCACGAATATAAGTTCCGTGTACGTGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 90 bp GAGTTCAGACTCCTGGCTTGGCTCACTGGTTCCATACACGTTGATTaGACGTACACGGAACTTATATTCGTGGTCAGGCAGCAGGTCCTG +
Preference number: 1 (lower is better)
Translates to: EFRLLAWLTGSIHVD*TYTELIFVVRQQVL
Trigger: CAGGACCTGCTGCCTGACCACGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGAACTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp ACCACCAGGCACGTGTACACTCCCACGTCATCTTGGTTGACTCCATaGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACA +
Preference number: 1 (lower is better)
Translates to: TTRHVYTPTSSWLTP*ISRTCMPFFSDTDT
Trigger: TGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATGGAGTCAACCAAGATGACGTGGGAGTGTACACGTGCCTGGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp CTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGTaGTCAGGCAGCAGGTCCTGGACGTTGAAAGAGGTGCTGCGGCAT +
Preference number: 1 (lower is better)
Translates to: LVPYTLIARTRNLYS*SGSRSWTLKEVLRH
Trigger: ATGCCGCAGCACCTCTTTCAACGTCCAGGACCTGCTGCCTGACCACGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp TTCGGCTCTTCAGGTTTCTCTCCTACCGTTGTGAGTTCAGACTCCTaGCTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGG +
Preference number: 1 (lower is better)
Translates to: FGSSGFSPTVVSSDS*LGSLVPYTLIARTR
Trigger: CCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGAACTCACAACGGTAGGAGAGAAACCTGAAGAGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp AGGACCATGACGATGTTGGCCTTTTCTTCAAAGGCATCCACACACTaGACCAGCTTAGGGTGGTGGAGGCAGTTCATGATGCTAATCTCC +
Preference number: 1 (lower is better)
Translates to: RTMTMLAFSSKASTH*TSLGWWRQFMMLIS
Trigger: GGAGATTAGCATCATGAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAAGGCCAACATCGTCATGGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp TTGTTTCTCTCACAAATGACCTATTGGCACTGTCCAAACCTTGGATaGAAAGTTCAGCTGACATCGAGGCCTTCCCCGACCCGTTCACCA +
Preference number: 1 (lower is better)
Translates to: LFLSQMTYWHCPNLG*KVQLTSRPSPTRSP
Trigger: TGGTGAACGGGTCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATCCAAGGTTTGGACAGTGCCAATAGGTCATTTGTGAGAGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp GCCTTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTaGAGGCAGTTCATGATGCTAATCTCCTGCCGGATATTCTCTTTC +
Preference number: 1 (lower is better)
Translates to: AFSSKASTHWTSLGW*RQFMMLISCRIFSF
Trigger: GAAAGAGAATATCCGGCAGGAGATTAGCATCATGAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp TTGGCCTTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTaGTGGAGGCAGTTCATGATGCTAATCTCCTGCCGGATATTCTCT +
Preference number: 1 (lower is better)
Translates to: LAFSSKASTHWTSLG*WRQFMMLISCRIFS
Trigger: AGAGAATATCCGGCAGGAGATTAGCATCATGAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp ACTTCTTCATCCGGTCCTTGGAGAGTTTCTTGGCCTCCATGTTCTTaGTATCTTTCATTAGCCATGGATGCTGAAGGCACTGCGTGCAGT +
Preference number: 1 (lower is better)
Translates to: TSSSGPWRVSWPPCS*YLSLAMDAEGTACS
Trigger: ACTGCACGCAGTGCCTTCAGCATCCATGGCTAATGAAAGATACCAAGAACATGGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 90 bp TTCTTGGCCTCCATGTTCTTGGTATCTTTCATTAGCCATGGATGCTaGAGGCACTGCGTGCAGTCCAGGCGGTTTTTCATATCTTTCTTC +
Preference number: 1 (lower is better)
Translates to: FLASMFLVSFISHGC*RHCVQSRRFFISFF
Trigger: GAAGAAAGATATGAAAAACCGCCTGGACTGCACGCAGTGCCTTCAGCATCCATGGCTAATGAAAGATACCAAGAACATGGAGGCCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 90 bp TGGACCAGCTTAGGGTGGTGGAGGCAGTTCATGATGCTAATCTCCTaGCGGATATTCTCTTTCTCTTTTGCTGAATATGCCTTGAAGAAC +
Preference number: 1 (lower is better)
Translates to: WTSLGWWRQFMMLIS*RIFSFSFAEYALKN
Trigger: GTTCTTCAAGGCATATTCAGCAAAAGAGAAAGAGAATATCCGGCAGGAGATTAGCATCATGAACTGCCTCCACCACCCTAAGCTGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp GTACTTTGGAATAAAGTGGCTCAACTGCTTTCAGAAATGAATTGCTaGAGTACTGGGAGAAAACCCAGTTCTCTAGAGTCAGGGGGTGGG +
Preference number: 1 (lower is better)
Translates to: VLWNKVAQLLSEMNC*STGRKPSSLESGGG
Trigger: CCCACCCCCTGACTCTAGAGAACTGGGTTTTCTCCCAGTACTCCAGCAATTCATTTCTGAAAGCAGTTGAGCCACTTTATTCCAAAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR GCA 90 bp GTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGGACACCTaGTCTATAAGATATCCTTCTAGAATGATTGATATAGTACTAAGC +
Preference number: 1 (lower is better)
Translates to: VTWFLTGYLPGVGDT*SIRYPSRMIDIVLS
Trigger: GCTTAGTACTATATCAATCATTCTAGAAGGATATCTTATAGAGCAGGTGTCCCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR CCA 90 bp TCCTTCTTGCCATGTACTTCTTCATCCGGTCCTTGGAGAGTTTCTTaGCCTCCATGTTCTTGGTATCTTTCATTAGCCATGGATGCTGAA +
Preference number: 1 (lower is better)
Translates to: SFLPCTSSSGPWRVS*PPCSWYLSLAMDAE
Trigger: TTCAGCATCCATGGCTAATGAAAGATACCAAGAACATGGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGAAGTACATGGCAAGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp TTTTCTGCCATTTCCTTCTTGCCATGTACTTCTTCATCCGGTCCTTaGAGAGTTTCTTGGCCTCCATGTTCTTGGTATCTTTCATTAGCC +
Preference number: 1 (lower is better)
Translates to: FSAISFLPCTSSSGP*RVSWPPCSWYLSLA
Trigger: GGCTAATGAAAGATACCAAGAACATGGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGAAGTACATGGCAAGAAGGAAATGGCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 90 bp TGTCCAGCTTCGACTCCTTTGAGATTACATTGGTCACCTCTTTCCTaGCATCTGAATTGGTGGCTTTTGTTTCTCTCACAAATGACCTAT +
Preference number: 1 (lower is better)
Translates to: CPASTPLRLHWSPLS*HLNWWLLFLSQMTY
Trigger: ATAGGTCATTTGTGAGAGAAACAAAAGCCACCAATTCAGATGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCTGGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 90 bp ATCTCTCCTCAATGTCGTAGAAGTCAGATACTTTTTGTTCAGTATTaGTTGTCACTGTCCGGTAATCAACCTCGGGCTCCTTCTCATCAT +
Preference number: 1 (lower is better)
Translates to: ISPQCRRSQILFVQY*LSLSGNQPRAPSHH
Trigger: ATGATGAGAAGGAGCCCGAGGTTGATTACCGGACAGTGACAATCAATACTGAACAAAAAGTATCTGACTTCTACGACATTGAGGAGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 90 bp AGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTACATaGAGTTCTCCAGCTCTTTATCAGTTGAAATCTGTTTCATCGTGG +
Preference number: 1 (lower is better)
Translates to: RCIKLWLSWRRFQST*SSPALYQLKSVSSW
Trigger: CCACGATGAAACAGATTTCAACTGATAAAGAGCTGGAGAACTCCATGTACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR CCA 90 bp GCAAGTCTGAGTGCATTTACCAGGTCTAAGAATATATTTAAAGGTTaGGGGCAAGGCATGATTGATGCACATTTAAGAAGAAAAATATGG +
Preference number: 1 (lower is better)
Translates to: ASLSAFTRSKNIFKG*GQGMIDAHLRRKIW
Trigger: CCATATTTTTCTTCTTAAATGTGCATCAATCATGCCTTGCCCCCAACCTTTAAATATATTCTTAGACCTGGTAAATGCACTCAGACTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR CAA 90 bp GGGCCGTTCTGGGCGAGTCCTTGCATGACTCCAGCTTGGACTCCCTaGGGGGCTGAGGCTGGCTGTTTGCAGCCCAGGGTGGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: GPFWASPCMTPAWTP*GAEAGCLQPRVGSH
Trigger: GTGGCTCCCCACCCTGGGCTGCAAACAGCCAGCCTCAGCCCCCAAGGGAGTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAACGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp AGAGCTCTTGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTGGCTTGAGCCAGGTGACCTaGGGTTGGGGCCGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: RALGPPGFHLWGLGVLTGLSQVT*GWGRPV
Trigger: CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAA...GCCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCATTGCTCACAACATCTTaGCTCCCCAGGCCAGGCTGC +
Preference number: 2 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPLLTTS*LPRPGC
Trigger: GCAGCCTGGCCTGGGGAGCCAAGATGTTGTGAGCAA...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTAGAGGTCCTCGCAGCTaGCAGGCTCCCTCCCCCGTG +
Preference number: 2 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVARGPRS*QAPSPV
Trigger: CACGGGGGAGGGAGCCTGCCAGCTGCGAGGACCTCT...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp GGCAAGCCTTTCCACTTGGAGGGTCCAGCTACAGGACAGCTGGCCTaGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: GKPFHLEGPATGQLA*GVGSSAAVCPTVPG
Trigger: ACCAGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAGCTGGACCCTCCAAGTGGAAAGGCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp CTACAGGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCTGCGGGGCCGTTCTaGGCGAGTCCTTGCATGACT +
Preference number: 2 (lower is better)
Translates to: LQDSWPWALEAVQLYVPLSAGPF*ASPCMT
Trigger: AGTCATGCAAGGACTCGCCCAGAACGGCCCCGCAGA...CAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTCAGGCCTGGTGCTCTTaGTTCCGGCTGAACTCTTGC +
Preference number: 2 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPQAWCS*FRLNSC
Trigger: GCAAGAGTTCAGCCGGAACCAAGAGCACCAGGCCTG...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp GTGGCTGAGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGGACTCCCTTGGGGGCTaGGGCTGGCTGTTTGCAGCC +
Preference number: 2 (lower is better)
Translates to: VAEVTLAKVSLSLSPMKGDSLGG*GWLFAA
Trigger: GGCTGCAAACAGCCAGCCTCAGCCCCCAAGGGAGTC...CCCCTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTGCTCTTGGTTCCGGCTaGACTCTTGCGGCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVAALGSG*TLAACR
Trigger: CCTGCAGGCCGCAAGAGTTCAGCCGGAACCAAGAGC...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCGGGCGTTGGAAGCAGTaGAGCTGTATGTCCCACTGT +
Preference number: 2 (lower is better)
Translates to: IIHGDLAGALRLASVILGGRWKQ*SCMSHC
Trigger: ACAGTGGGACATACAGCTGCACTGCTTCCAACGCCC...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp AGAGCTCTTGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTGGCCAGCTACAGGACAGCTaGCCTTGGGCGTTGGAAGCA +
Preference number: 2 (lower is better)
Translates to: RALGPPGFHLWGLGVLTGQLQDS*PWALEA
Trigger: TGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAGCTG...GCCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp TGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCTACACACTaGTATAAGCCTCTGTCCTCAGGCAGTGCCTTCTCGATGGAGACG +
Preference number: 2 (lower is better)
Translates to: WQEHSAWPASFLATH*YKPLSSGSAFSMET
Trigger: CGTCTCCATCGAGAAGGCACTGCCTGAGGACAGAGGCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACAGAGCTGGAAGTCTTCTaGAGGACCGGGGTCTGCGGG +
Preference number: 2 (lower is better)
Translates to: PRLLTALQVYLASSSPQTELEVF*RTGVCG
Trigger: CCCGCAGACCCCGGTCCTTCAGAAGACTTCCAGCTC...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp AGAGCTCTTGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTGGCTCTGTCCTCAGGCAGTaGCTTCTCGATGGAGACGGA +
Preference number: 2 (lower is better)
Translates to: RALGPPGFHLWGLGVLTGSVLRQ*LLDGDG
Trigger: TCCGTCTCCATCGAGAAGGCACTGCCTGAGGACAGA...GCCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCAGGCCACTTCAGGCTTTaGAATCCCGGAAACTTCACA +
Preference number: 2 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPGHFRL*NPGNFT
Trigger: TGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCC...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTAGTGATCCGGGGCACTaGGGTCCCCCGTACGGAGCA +
Preference number: 2 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLSDPGH*GPPYGA
Trigger: TGCTCCGTACGGGGGACCCCAGTGCCCCGGATCACT...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACAACAGTGAGGTTGACCTaGGCCTGCCTGCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: PRLLTALQVYLASSSPQTTVRLT*ACLLPS
Trigger: GCTGGGCAGCAGGCAGGCCCAGGTCAACCTCACTGT...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp ACAGTCGCATCACTCTCAGTTCCTAGCACGGGAGGAAGAGAGCTCTaGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTG +
Preference number: 2 (lower is better)
Translates to: TVASLSVPSTGGREL*GLRDFISGALVFSL
Trigger: CAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCTCTTCCTCCCGTGCTAGGAACTGAGAGTGATGCGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACAGCAGGTCCTGGACGTTaGAAGAGGTGCTGCGGCATG +
Preference number: 2 (lower is better)
Translates to: PRLLTALQVYLASSSPQTAGPGR*KRCCGM
Trigger: CATGCCGCAGCACCTCTTTCAACGTCCAGGACCTGC...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCATGGATTTCCAGAACCTaGATGCCGTTCTTCTCAGAC +
Preference number: 2 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPWISRT*MPFFSD
Trigger: GTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCA...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCGACCCCCAGGCCTGGTaGTCTTGGTTCCGGCTGAAC +
Preference number: 2 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFDPQAW*SWFRLN
Trigger: GTTCAGCCGGAACCAAGAGCACCAGGCCTGGGGGTC...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCCCTGGGCCTGCCTGCTaGCCAGCTTGTTCTCCACCA +
Preference number: 2 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFPGPAC*PACSPP
Trigger: TGGTGGAGAACAAGCTGGGCAGCAGGCAGGCCCAGG...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGGGGGAGCCACCTCTCTaGGGGCTGGAGCAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLGEPPL*GLEQFL
Trigger: CAAGAACTGCTCCAGCCCCCAGAGAGGTGGCTCCCC...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACATGGACGGGGAGGAGCTaGCCTCTTCCTCTCTTCTCC +
Preference number: 2 (lower is better)
Translates to: PRLLTALQVYLASSSPQTWTGRS*PLPLFS
Trigger: GGAGAAGAGAGGAAGAGGCCAGCTCCTCCCCGTCCA...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTTGGTCACCTCTTTCCTaGCATCTGAATTGGTGGCTT +
Preference number: 2 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPWSPLS*HLNWWL
Trigger: AAGCCACCAATTCAGATGTCAGGAAAGAGGTGACCA...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCGGGCGAGTCCTTGCATaGCTCCAGCTTGGACTCCCT +
Preference number: 2 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFGRVLA*LQLGLP
Trigger: AGGGAGTCCAAGCTGGAGTCATGCAAGGACTCGCCC...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp AGAGCTCTTGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTGGCAAATTTGGGGAATGCTaGATCCCTCTGGCCCTCCAT +
Preference number: 2 (lower is better)
Translates to: RALGPPGFHLWGLGVLTGKFGEC*IPLALH
Trigger: ATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTT...GCCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp CTACAGGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGCATAAACCTCAATGCTaGCTTCCTGTCTCCTCACGG +
Preference number: 2 (lower is better)
Translates to: LQDSWPWALEAVQLYVPLHKPQC*LPVSSR
Trigger: CCGTGAGGAGACAGGAAGGCAGCATTGAGGTTTATG...CAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCACCCCGTACGGAGCACTaGAGCACAAAATCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPPRTEH*STKSWP
Trigger: GGGCCAGGATTTTGTGCTGCAGTGCTCCGTACGGGG...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTAAGACAGTTTTTCCATaGACCAGGAGAGGGGGTGGT +
Preference number: 2 (lower is better)
Translates to: GWLETQMAAAATISCVARKTVFP*TRRGGG
Trigger: ACCACCCCCTCTCCTGGTCCATGGAAAAACTGTCTT...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR CCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACAGCTGGCCTTGGGCGTTaGAAGCAGTGCAGCTGTATG +
Preference number: 2 (lower is better)
Translates to: PRLLTALQVYLASSSPQTAGLGR*KQCSCM
Trigger: CATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGC...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp GTGGCTGAGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGAGTCCTTCAGGACACTaGAGAAGGAGGGGGCCACCT +
Preference number: 2 (lower is better)
Translates to: VAEVTLAKVSLSLSPMKGSPSGH*RRRGPP
Trigger: AGGTGGCCCCCTCCTTCTCCAGTGTCCTGAAGGACT...CCCCTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp CGTACACGGAACTTATATTCGTGGTCAGGCAGCAGGTCCTGGACGTaGAAAGAGGTGCTGCGGCATGTGGCTAGTTCCTTCCACGTCTTG +
Preference number: 2 (lower is better)
Translates to: RTRNLYSWSGSRSWT*KEVLRHVASSFHVL
Trigger: CAAGACGTGGAAGGAACTAGCCACATGCCGCAGCACCTCTTTCAACGTCCAGGACCTGCTGCCTGACCACGAATATAAGTTCCGTGTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp TCATCGAATGCCTCGTCGTCGAAGTCCCAGGTGGCTGAGGTAACGTaGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: SSNASSSKSQVAEVT*AKVSLSLSPMKGER
Trigger: CCTTTCCCCCTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCACCTGGGACTTCGACGACGAGGCATTCGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAAGCCAGAGTCATCCATaGGCAGGGACCTGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: TRTSHMAPSNQEAESEALSQSHP*AGTCLQ
Trigger: CTGAAGACAGGTCCCTGCTCATGGATGACTCTGGCT...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR TCA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAGTTGGGGCCGGCCAGTaGTCTTGCAGGAGAATCGTC +
Preference number: 2 (lower is better)
Translates to: SNLGNAESLWPSMGILLLVGAGQ*SCRRIV
Trigger: GACGATTCTCCTGCAAGATCACTGGCCGGCCCCAAC...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACAGATGGAAAGTTCAGCTaGCATCGAGGCCTTCCCCGA +
Preference number: 2 (lower is better)
Translates to: PRLLTALQVYLASSSPQTDGKFS*HRGLPR
Trigger: TCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATC...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTTTGCGGCCTGCAGGGTaGTGGAGCTGGAAGTCTTCT +
Preference number: 2 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLLRPAG*WSWKSS
Trigger: AGAAGACTTCCAGCTCCATCACCCTGCAGGCCGCAA...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp GCCTTCCAGGAACCAGGCCACTTCAGGCTTTGGAATCCCGGAAACTTCACATCTACACGGGCACTCGGCTaGAGTGGAACATTTCCCTTG +
Preference number: 2 (lower is better)
Translates to: AFQEPGHFRLWNPGNFTSTRALG*SGTFPL
Trigger: CAAGGGAAATGTTCCACTGCAGCCGAGTGCCCGTGT...AGATGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCTGGTTCCTGGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTTTCCGGCTGAACTCTTaGGGCCTGCAGGGTGATGGA +
Preference number: 2 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLFRLNS*GLQGDG
Trigger: TCCATCACCCTGCAGGCCGCAAGAGTTCAGCCGGAA...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp GACACTGGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGCTTCATAAACCTCAATaGTGCCTTCCTGTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: DTGEGGGHLHHGKPFHLELHKPQ*CLPVSS
Trigger: TGAGGAGACAGGAAGGCAGCATTGAGGTTTATGAAG...CTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCCAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTACTCCCTCCGAGATCTaGCGCATGTACTTGATGCAC +
Preference number: 2 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVATPSEI*RMYLMH
Trigger: GTGCATCAAGTACATGCGGCAGATCTCGGAGGGAGT...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTTGTCCAAACCTTGGATaGAAAGTTCAGCTGACATCG +
Preference number: 2 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPCPNLG*KVQLTS
Trigger: CGATGTCAGCTGAACTTTCCATCCAAGGTTTGGACA...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp GTGGCTGAGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGCACCTCTCTGGGGGCTaGAGCAGTTCTTGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: VAEVTLAKVSLSLSPMKGHLSGG*SSSCFW
Trigger: CCAAAAGCAAGAACTGCTCCAGCCCCCAGAGAGGTG...CCCCTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTGCAGTGCCTTCTCGATaGAGACGGAGCAGAGTGAGC +
Preference number: 2 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLAVPSR*RRSRVS
Trigger: GCTCACTCTGCTCCGTCTCCATCGAGAAGGCACTGC...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTAGGACAGTCTTCCAATaGCTCTCACAGCATTGCCCG +
Preference number: 2 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVARTVFQ*LSQHCP
Trigger: CGGGCAATGCTGTGAGAGCCATTGGAAGACTGTCCT...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp TCAAACAGCTCCCCTCCTGACACGATCTCCAGGACCATGACGATGTaGGCCTTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGG +
Preference number: 2 (lower is better)
Translates to: SNSSPPDTISRTMTM*AFSSKASTHWTSLG
Trigger: CCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAAGGCCAACATCGTCATGGTCCTGGAGATCGTGTCAGGAGGGGAGCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp TGCTTGTGGATGTACTCCACTCCCTCCGAGATCTGCCGCATGTACTaGATGCACTCACGCTCCGTCAGCTCAAAGTCCTCGTCAATGATG +
Preference number: 2 (lower is better)
Translates to: CLWMYSTPSEICRMY*MHSRSVSSKSSSMM
Trigger: CATCATTGACGAGGACTTTGAGCTGACGGAGCGTGAGTGCATCAAGTACATGCGGCAGATCTCGGAGGGAGTGGAGTACATCCACAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp GTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTaGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACA +
Preference number: 2 (lower is better)
Translates to: VSTMSSAVQVASPRL*TALQVYLASSSPQT
Trigger: TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTCGATCTCCAGGACCATaGCGATGTTGGCCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVARSPGP*RCWPFL
Trigger: AAGAAAAGGCCAACATCGTCATGGTCCTGGAGATCG...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp GTGGCTGAGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGGTTCTTGCTTTTGGCTaGAGCCTCCAGACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: VAEVTLAKVSLSLSPMKGVLAFG*SLQTVQ
Trigger: CTGGACAGTCTGGAGGCTGCAGCCAAAAGCAAGAAC...CCCCTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCAGGCTGGAGCAGTTCTTaGTTTTGGCTGCAGCCTCCA +
Preference number: 2 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPGWSSS*FWLQPP
Trigger: TGGAGGCTGCAGCCAAAAGCAAGAACTGCTCCAGCC...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCTGCATGACTCCAGCTTaGACTCCCTTGGGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: SLPMALTALPVFCHFLLACMTPA*TPLGAE
Trigger: CTCAGCCCCCAAGGGAGTCCAAGCTGGAGTCATGCA...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTCAGAGTGAGCCTTCCTaGGAGAGGATGATGAACTTG +
Preference number: 2 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVAQSEPS*ERMMNL
Trigger: CAAGTTCATCATCCTCTCCCAGGAAGGCTCACTCTG...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCAGGTGTTCTCACTGGCTaGAGCATCATCCACGGTGAC +
Preference number: 2 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPGVLTG*SIIHGD
Trigger: GTCACCGTGGATGATGCTCCAGCCAGTGAGAACACC...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGCCTTGGTGTTCTCACTaGCTGGAGCATCATCCACGG +
Preference number: 2 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLPWCSH*LEHHPR
Trigger: CCGTGGATGATGCTCCAGCCAGTGAGAACACCAAGG...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCAGGTGCTGCGGCATGTaGCTAGTTCCTTCCACGTCT +
Preference number: 2 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFRCCGM*LVPSTS
Trigger: AGACGTGGAAGGAACTAGCCACATGCCGCAGCACCT...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACACAGTTTGATTTTCCTTaGCCTCCTGGCTTTGGGGCT +
Preference number: 2 (lower is better)
Translates to: PRLLTALQVYLASSSPQTQFDFP*PPGFGA
Trigger: AGCCCCAAAGCCAGGAGGTCAAGGAAAATCAAACTG...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTCTAGGATGTAGCAGATaGCCCCGATGCTCCACATGT +
Preference number: 2 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLLGCSR*PRCSTC
Trigger: ACATGTGGAGCATCGGGGTCATCTGCTACATCCTAG...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTTTCTGGGCGAGTCCTTaGATGACTCCAGCTTGGACT +
Preference number: 2 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLFWASP*MTPAWT
Trigger: AGTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAA...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp GTGGCTGAGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGCCTGGCTTTGGGGCTTaGTCTCAAATTTGGGGAATG +
Preference number: 2 (lower is better)
Translates to: VAEVTLAKVSLSLSPMKGPGFGA*SQIWGM
Trigger: CATTCCCCAAATTTGAGAGCAAGCCCCAAAGCCAGG...CCCCTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGAGGTTGACCTGGGCCTaGCTGCTGCCCAGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSRLTWA*LLPSLF
Trigger: GAACAAGCTGGGCAGCAGGCAGGCCCAGGTCAACCT...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCAGGAGATCTCATCGAATaGCTCGTCGTCGAAGTCCCA +
Preference number: 2 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPGDLIE*LVVEVP
Trigger: TGGGACTTCGACGACGAGGCATTCGATGAGATCTCC...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGGAGAGTCAGCAAAACTaGCAGGTGGAAGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGESQQN*QVEGER
Trigger: TCTTTCCCCTTCCACCTGCCAGTTTTGCTGACTCTC...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR CCA 90 bp AGAGCTCTTGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTGGCTCACAAATGACCTATTaGCACTGTCCAAACCTTGGA +
Preference number: 2 (lower is better)
Translates to: RALGPPGFHLWGLGVLTGSQMTY*HCPNLG
Trigger: TCCAAGGTTTGGACAGTGCCAATAGGTCATTTGTGA...GCCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCAATGCTGAATCCCTCTaGCCCTCCATGGGGATTCTC +
Preference number: 2 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFNAESL*PSMGIL
Trigger: GAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATT...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTCCTTCCACGTCTTGTTaGCTGAGTCCCAGATCTCGA +
Preference number: 2 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLPSTSC*LSPRSR
Trigger: TCGAGATCTGGGACTCAGCCAACAAGACGTGGAAGG...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp GTGGCTGAGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGTTCAGACTCCTGGCTTaGCTCACTGGTTCCATACAC +
Preference number: 2 (lower is better)
Translates to: VAEVTLAKVSLSLSPMKGFRLLA*LTGSIH
Trigger: GTGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGAA...CCCCTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp GTTGTGAGTTCAGACTCCTGGCTTGGCTCACTGGTTCCATACACGTaGATTGCACGTACACGGAACTTATATTCGTGGTCAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: VVSSDSWLGSLVPYT*IARTRNLYSWSGSR
Trigger: CCTGCTGCCTGACCACGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGAACTCACAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp ATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTaGCAGGTGTACTTGGCATCGTCATCCCCGCAAACATCACTAATA +
Preference number: 2 (lower is better)
Translates to: MSSAVQVASPRLLTA*QVYLASSSPQTSLI
Trigger: TATTAGTGATGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAGCCAGAGTCATCCATaGGCAGGGACCTGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGSQSHP*AGTCLQ
Trigger: CTGAAGACAGGTCCCTGCTCATGGATGACTCTGGCT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR GCA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCAGTCCCAGATCTCGATaGTGTAGGACTGTACAGCAC +
Preference number: 2 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFSPRSR*CRTVQH
Trigger: GTGCTGTACAGTCCTACAGCATCGAGATCTGGGACT...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR GCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTCCACAAATTCTGGGGTaGCAAAGAGGACCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLPQILG*QRGPSE
Trigger: CTCTGAAGGTCCTCTTTGGCACCCCAGAATTTGTGG...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTATGAGCGCATTCAAGTaGAGAATTTATGACTTTGCC +
Preference number: 2 (lower is better)
Translates to: GWLETQMAAAATISCVARMSAFK*RIYDFA
Trigger: GGCAAAGTCATAAATTCTCCACTTGAATGCGCTCAT...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR CCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTATCTGCAGTGTACTTTaGAATAAAGTGGCTCAACTG +
Preference number: 2 (lower is better)
Translates to: GWLETQMAAAATISCVARICSVL*NKVAQL
Trigger: CAGTTGAGCCACTTTATTCCAAAGTACACTGCAGAT...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR CCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTTCTTCATCCGGTCCTTaGAGAGTTTCTTGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLSSSGP*RVSWPP
Trigger: TGGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGA...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTAGCATCTTGAGGACCTaGTACTCTGTAACAGTGGTC +
Preference number: 2 (lower is better)
Translates to: ILGWLETQMAAAATISCVSILRT*YSVTVV
Trigger: GACCACTGTTACAGAGTATCAGGTCCTCAAGATGCT...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR TCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGACTGCCCCCATCATATaGGGAGCCATACCAGGACAG +
Preference number: 2 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSTAPII*GAIPGQ
Trigger: CTGTCCTGGTATGGCTCCTCATATGATGGGGGCAGT...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGCTCTGGGCTGAGCTGTaGCCCAGAACTCTTGTTTTG +
Preference number: 2 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGLWAEL*PRTLVL
Trigger: CAAAACAAGAGTTCTGGGCCACAGCTCAGCCCAGAG...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACAGCTTGCTCTCAAATTTaGGGAATGCTGAATCCCTCT +
Preference number: 2 (lower is better)
Translates to: PRLLTALQVYLASSSPQTACSQI*GMLNPS
Trigger: AGAGGGATTCAGCATTCCCCAAATTTGAGAGCAAGC...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGTCATCTCTGGGGCCTTaGTGTTCTCACTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSSSLGP*CSHWLE
Trigger: CTCCAGCCAGTGAGAACACCAAGGCCCCAGAGATGA...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCCCTTCGGAGGTGTCTTaGGGGCAGGTTTCTTTTTCA +
Preference number: 2 (lower is better)
Translates to: SLPMALTALPVFCHFLLAPSEVS*GQVSFS
Trigger: TGAAAAAGAAACCTGCCCCCAAGACACCTCCGAAGG...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCACCAGCTTAGGGTGGTaGAGGCAGTTCATGATGCTA +
Preference number: 2 (lower is better)
Translates to: SLPMALTALPVFCHFLLATSLGW*RQFMML
Trigger: TAGCATCATGAACTGCCTCCACCACCCTAAGCTGGT...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp GTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTGCAGGTGTACTaGGCATCGTCATCCCCGCAAACATCACTAATAATTAAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: VQVASPRLLTALQVY*ASSSPQTSLIIKEQ
Trigger: CTGCTCTTTAATTATTAGTGATGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGCCAGAGTCATCCATaGGCAGGGACCTGTCTTCAG +
Preference number: 2 (lower is better)
Translates to: HGFLTKCLKLLDICKEGISQSHP*AGTCLQ
Trigger: CTGAAGACAGGTCCCTGCTCATGGATGACTCTGGCT...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR TCA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTACCACGTCATCTTGGTTaGCTCCATGGATTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: SNLGNAESLWPSMGILLLPRHLG*LHGFPE
Trigger: TTCTGGAAATCCATGGAGTCAACCAAGATGACGTGG...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGAGAGGGGGTGGTTTTaGGATTATTCAAGCACATTA +
Preference number: 2 (lower is better)
Translates to: TRTSHMAPSNQEAESEALERGWF*DYSSTL
Trigger: TAATGTGCTTGAATAATCCCAAAACCACCCCCTCTC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR CCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTCAGGGACCACTTTCATaGAAGACAGTTTTTCCATGG +
Preference number: 2 (lower is better)
Translates to: ILGWLETQMAAAATISCVQGPLS*KTVFPW
Trigger: CCATGGAAAAACTGTCTTCCATGAAAGTGGTCCCTG...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR CCA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGTCTTGGTTGACTCCATaGATTTCCAGAACCTGCATG +
Preference number: 2 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLSWLTP*ISRTCM
Trigger: CATGCAGGTTCTGGAAATCCATGGAGTCAACCAAGA...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CCA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCACTCCCACGTCATCTTaGTTGACTCCATGGATTTCC +
Preference number: 2 (lower is better)
Translates to: SLPMALTALPVFCHFLLATPTSS*LTPWIS
Trigger: GGAAATCCATGGAGTCAACCAAGATGACGTGGGAGT...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp GCTGCAGCCTCCAGACTGTCCAGCTTCGACTCCTTTGAGATTACATaGGTCACCTCTTTCCTGACATCTGAATTGGTGGCTTTTGTTTCT +
Preference number: 2 (lower is better)
Translates to: AAASRLSSFDSFEIT*VTSFLTSELVAFVS
Trigger: AGAAACAAAAGCCACCAATTCAGATGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCTGGACAGTCTGGAGGCTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 90 bp AGGCGGTTTTTCATATCTTTCTTCAGCAGATTGCTGATGAAATCCTaGGCATCGTCGGAGATCTCATCGAATGCCTCGTCGTCGAAGTCC +
Preference number: 2 (lower is better)
Translates to: RRFFISFFSRLLMKS*ASSEISSNASSSKS
Trigger: GGACTTCGACGACGAGGCATTCGATGAGATCTCCGACGATGCCAAGGATTTCATCAGCAATCTGCTGAAGAAAGATATGAAAAACCGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTTATTGTTTGAACATCTaGAGACATGGGGAACTTGCC +
Preference number: 2 (lower is better)
Translates to: ILGWLETQMAAAATISCVYCLNI*RHGELA
Trigger: GGCAAGTTCCCCATGTCTTCAGATGTTCAAACAATA...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR TCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTATTTATCAAAAACAGGTaGGGTGTGGAGCAAAAAGCA +
Preference number: 2 (lower is better)
Translates to: TRTSHMAPSNQEAESEALFIKNR*GVEQKA
Trigger: TGCTTTTTGCTCCACACCTCACCTGTTTTTGATAAA...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR GCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAAAGCTGCTAGACATCTaGAAAGAGGGGATAAGTTTA +
Preference number: 2 (lower is better)
Translates to: TRTSHMAPSNQEAESEALKLLDI*KEGISL
Trigger: TAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTT...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR GCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGAAGCTGCTAGACATCTaGAAAGAGGGGATAAGTTTA +
Preference number: 2 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGKLLDI*KEGISL
Trigger: TAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTT...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGAGAGTCAGCAAAACTaGCAGGTGGAAGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDESQQN*QVEGER
Trigger: TCTTTCCCCTTCCACCTGCCAGTTTTGCTGACTCTC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGAAACTCTGGCTATCTTaGAGGAGATTCCAAAGTACA +
Preference number: 2 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGKLWLS*RRFQST
Trigger: TGTACTTTGGAATCTCCTCCAAGATAGCCAGAGTTT...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR CCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGAACATCTGAAGACATaGGGAACTTGCCATCTGATA +
Preference number: 2 (lower is better)
Translates to: ILGWLETQMAAAATISCVEHLKT*GTCHLI
Trigger: TATCAGATGGCAAGTTCCCCATGTCTTCAGATGTTC...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR TCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTATCCACAATATTGTTTaGACATCTGAAGACATGGGG +
Preference number: 2 (lower is better)
Translates to: ILGWLETQMAAAATISCVIHNIV*TSEDMG
Trigger: CCCCATGTCTTCAGATGTTCAAACAATATTGTGGAT...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR TCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGCAGCTTCGACTCCTTTaGGATTACATTGGTCACCTC +
Preference number: 2 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSQLRLL*DYIGHL
Trigger: GAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCTG...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAACTGCTTTCAGAAATaGATTGCTGGAGTACTGGGA +
Preference number: 2 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGNCFQK*IAGVLG
Trigger: TCCCAGTACTCCAGCAATTCATTTCTGAAAGCAGTT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR CAA 90 bp GTTTTCTGCCATTTCCTTCTTGCCATGTACTTCTTCATCCGGTCCTaGGAGAGTTTCTTGGCCTCCATGTTCTTGGTATCTTTCATTAGC +
Preference number: 2 (lower is better)
Translates to: VFCHFLLAMYFFIRS*ESFLASMFLVSFIS
Trigger: GCTAATGAAAGATACCAAGAACATGGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGAAGTACATGGCAAGAAGGAAATGGCAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR TCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAACTGCTTTCAGAAATaGATTGCTGGAGTACTGGGA +
Preference number: 2 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDNCFQK*IAGVLG
Trigger: TCCCAGTACTCCAGCAATTCATTTCTGAAAGCAGTT...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR TCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGGAGAAATGGAGAGTTTaGACATCTGCAGTGTACTTT +
Preference number: 2 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGEKWRV*TSAVYF
Trigger: AAAGTACACTGCAGATGTTCAAACTCTCCATTTCTC...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATTCAGAAATGAATTGCTaGAGTACTGGGAGAAAACCC +
Preference number: 2 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDSEMNC*STGRKP
Trigger: GGGTTTTCTCCCAGTACTCCAGCAATTCATTTCTGA...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATATGAGCGCATTCAAGTaGAGAATTTATGACTTTGCC +
Preference number: 2 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDMSAFK*RIYDFA
Trigger: GGCAAAGTCATAAATTCTCCACTTGAATGCGCTCAT...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGAACTGCTTTCAGAAATaGATTGCTGGAGTACTGGGA +
Preference number: 2 (lower is better)
Translates to: CLKLLDICKEGISLDFLLNCFQK*IAGVLG
Trigger: TCCCAGTACTCCAGCAATTCATTTCTGAAAGCAGTT...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAATGAGCGCATTCAAGTaGAGAATTTATGACTTTGCC +
Preference number: 2 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIMSAFK*RIYDFA
Trigger: GGCAAAGTCATAAATTCTCCACTTGAATGCGCTCAT...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGGAATTGCTGGAGTACTaGGAGAAAACCCAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMELLEY*EKTQFS
Trigger: AGAGAACTGGGTTTTCTCCCAGTACTCCAGCAATTC...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAATCTGCAGTGTACTTTaGAATAAAGTGGCTCAACTG +
Preference number: 2 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIICSVL*NKVAQL
Trigger: CAGTTGAGCCACTTTATTCCAAAGTACACTGCAGAT...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGGAGAGTCAGCAAAACTaGCAGGTGGAAGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKESQQN*QVEGER
Trigger: TCTTTCCCCTTCCACCTGCCAGTTTTGCTGACTCTC...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGGTGATTTCCCTAAATaGAATCTAGCTGCACTAGTA +
Preference number: 2 (lower is better)
Translates to: CLKLLDICKEGISLDFLLGDFPK*NLAALV
Trigger: TACTAGTGCAGCTAGATTTCATTTAGGGAAATCACC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGAGAAATGGAGAGTTTaGACATCTGCAGTGTACTTT +
Preference number: 2 (lower is better)
Translates to: CLKLLDICKEGISLDFLLEKWRV*TSAVYF
Trigger: AAAGTACACTGCAGATGTTCAAACTCTCCATTTCTC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTCAGAAATGAATTGCTaGAGTACTGGGAGAAAACCC +
Preference number: 2 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMSEMNC*STGRKP
Trigger: GGGTTTTCTCCCAGTACTCCAGCAATTCATTTCTGA...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGGTGATTTCCCTAAATaGAATCTAGCTGCACTAGTA +
Preference number: 2 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSGDFPK*NLAALV
Trigger: TACTAGTGCAGCTAGATTTCATTTAGGGAAATCACC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR TCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCGAGAAATGGAGAGTTTaGACATCTGCAGTGTACTTT +
Preference number: 2 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCEKWRV*TSAVYF
Trigger: AAAGTACACTGCAGATGTTCAAACTCTCCATTTCTC...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGGAATTGCTGGAGTACTaGGAGAAAACCCAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKELLEY*EKTQFS
Trigger: AGAGAACTGGGTTTTCTCCCAGTACTCCAGCAATTC...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATATACTTTGGAATAAAGTaGCTCAACTGCTTTCAGAAA +
Preference number: 2 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIYFGIK*LNCFQK
Trigger: TTTCTGAAAGCAGTTGAGCCACTTTATTCCAAAGTA...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGAAACTCTGGCTATCTTaGAGGAGATTCCAAAGTACA +
Preference number: 2 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMKLWLS*RRFQST
Trigger: TGTACTTTGGAATCTCCTCCAAGATAGCCAGAGTTT...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTACCACACGTTCAGAGCTaGTATTCTATAACAGCACAA +
Preference number: 2 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVPHVQS*YSITAQ
Trigger: TTGTGCTGTTATAGAATATCAGCTCTGAACGTGTGG...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR TCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCAGCTCTTTATCAGTTaGAATCTGTTTCATCGTGGC +
Preference number: 2 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEQLFIS*NLFHRG
Trigger: GCCACGATGAAACAGATTTCAACTGATAAAGAGCTG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCTAAAGACGCAAGTCTaGGTGCATTTACCAGGTCTA +
Preference number: 2 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLLKTQV*VHLPGL
Trigger: TAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGTCAGAAATGAATTGCTaGAGTACTGGGAGAAAACCC +
Preference number: 2 (lower is better)
Translates to: DYSCSVLIYHSDGIINQESEMNC*STGRKP
Trigger: GGGTTTTCTCCCAGTACTCCAGCAATTCATTTCTGA...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCTTCAATATGAAGGTATaGATAAAGCATTTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCFNMKV*IKHLAA
Trigger: GGCAGCCAAATGCTTTATCCATACCTTCATATTGAA...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTTGGCCTTATTTTTCATaGGCGCATTCAAGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLWPYFS*AHSSGE
Trigger: TTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCA...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAGAGAAATGGAGAGTTTaGACATCTGCAGTGTACTTT +
Preference number: 2 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVEKWRV*TSAVYF
Trigger: AAAGTACACTGCAGATGTTCAAACTCTCCATTTCTC...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR GCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGAGAGTTTGAACATCTaGAGTGTACTTTGGAATAAA +
Preference number: 2 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSESLNI*SVLWNK
Trigger: TTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGATGAGCGCATTCAAGTaGAGAATTTATGACTTTGCC +
Preference number: 2 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKMSAFK*RIYDFA
Trigger: GGCAAAGTCATAAATTCTCCACTTGAATGCGCTCAT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGATCTGCAGTGTACTTTaGAATAAAGTGGCTCAACTG +
Preference number: 2 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEICSVL*NKVAQL
Trigger: CAGTTGAGCCACTTTATTCCAAAGTACACTGCAGAT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR TCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGTGATTTCCCTAAATaGAATCTAGCTGCACTAGTA +
Preference number: 2 (lower is better)
Translates to: SSSLESVENEDVLNSGYLGDFPK*NLAALV
Trigger: TACTAGTGCAGCTAGATTTCATTTAGGGAAATCACC...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATGGTGATTTCCCTAAATaGAATCTAGCTGCACTAGTA +
Preference number: 2 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYGDFPK*NLAALV
Trigger: TACTAGTGCAGCTAGATTTCATTTAGGGAAATCACC...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAATCTGCAGTGTACTTTaGAATAAAGTGGCTCAACTG +
Preference number: 2 (lower is better)
Translates to: THNIHAHKGYILNTKVIEICSVL*NKVAQL
Trigger: CAGTTGAGCCACTTTATTCCAAAGTACACTGCAGAT...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGAGATTCCAAAGTACATaGAGTTCTCCAGCTCTTTAT +
Preference number: 2 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKRFQST*SSPALY
Trigger: ATAAAGAGCTGGAGAACTCCATGTACTTTGGAATCT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR GCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGGAGAGTTTGAACATCTaGAGTGTACTTTGGAATAAA +
Preference number: 2 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKESLNI*SVLWNK
Trigger: TTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTTACTTTGGAATAAAGTaGCTCAACTGCTTTCAGAAA +
Preference number: 2 (lower is better)
Translates to: SSSLESVENEDVLNSGYLYFGIK*LNCFQK
Trigger: TTTCTGAAAGCAGTTGAGCCACTTTATTCCAAAGTA...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAATATATTTAAAGGTTaGGGGCAAGGCATGATTGAT +
Preference number: 2 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLNIFKG*GQGMID
Trigger: ATCAATCATGCCTTGCCCCCAACCTTTAAATATATT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAAATATATTTAAAGGTTaGGGGCAAGGCATGATTGAT +
Preference number: 2 (lower is better)
Translates to: THNIHAHKGYILNTKVIENIFKG*GQGMID
Trigger: ATCAATCATGCCTTGCCCCCAACCTTTAAATATATT...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR CCA 72 bp CAGCACCAACTCCTCCACCACAGAGGTCCTCGCAGCTaGCAGGCTCCCTCCCCCGTGGAAGGGCTCTGGCAG +
Preference number: 3 (lower is better)
Translates to: QHQLLHHRGPRS*QAPSPVEGLWQ
Trigger: CTGCCAGAGCCCTTCCACGGGGGAGGGAGCCTGCCAGCTGCGAGGACCTCTGTGGTGGAGGAGTTGGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCACCAGCTTGGACTCCCTaGGGGGCTGAGGCTGGCTGT +
Preference number: 3 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPPAWTP*GAEAGC
Trigger: ACAGCCAGCCTCAGCCCCCAAGGGAGTCCAAGCTGG...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp GGGCCGTTCTGGGCGAGTCCTTGCATGACTCCAGCTTaGACTCCCTTGGGGGCTGAGGCTGGCTGTTTGCAG +
Preference number: 3 (lower is better)
Translates to: GPFWASPCMTPA*TPLGAEAGCLQ
Trigger: CTGCAAACAGCCAGCCTCAGCCCCCAAGGGAGTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAACGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp GATAGGACCCCCAGGCCTGGTGCTCTTGGTTCCGGCTaGACTCTTGCGGCCTGCAGGGTGATGGAGCTGGAA +
Preference number: 3 (lower is better)
Translates to: DRTPRPGALGSG*TLAACRVMELE
Trigger: TTCCAGCTCCATCACCCTGCAGGCCGCAAGAGTTCAGCCGGAACCAAGAGCACCAGGCCTGGGGGTCCTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp AAGTCTTCTGAAGGACCGGGGTCTGCGGGGCCGTTCTaGGCGAGTCCTTGCATGACTCCAGCTTGGACTCCC +
Preference number: 3 (lower is better)
Translates to: KSSEGPGSAGPF*ASPCMTPAWTP
Trigger: GGGAGTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAACGGCCCCGCAGACCCCGGTCCTTCAGAAGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp TGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGCCCATCTGTCCTTCTTaGACCACAACTCGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: CSGTFPLSQVTCGWGRPVPICPS*TTTRPS
Trigger: GCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGG...CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCGGCCGGCCAGTGATCTaGCAGGAGAATCGTCCCATC +
Preference number: 3 (lower is better)
Translates to: IIHGDLAGALRLASVILGGRPVI*QENRPI
Trigger: GATGGGACGATTCTCCTGCAAGATCACTGGCCGGCC...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp GACACTGGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGACAGGACAGCTGGCCTaGGGCGTTGGAAGCAGTGCA +
Preference number: 3 (lower is better)
Translates to: DTGEGGGHLHHGKPFHLETGQLA*GVGSSA
Trigger: TGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGT...CTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCCAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 72 bp AGCTACAGGACAGCTGGCCTTGGGCGTTGGAAGCAGTaGAGCTGTATGTCCCACTGTCCCTGGTCCGGGCTT +
Preference number: 3 (lower is better)
Translates to: SYRTAGLGRWKQ*SCMSHCPWSGL
Trigger: AAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTCCAGGTGACCTGCGGTaGGGGCCGGCCAGTGATCTT +
Preference number: 3 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVAPGDLR*GPASDL
Trigger: AAGATCACTGGCCGGCCCCAACCGCAGGTCACCTGG...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp CTCTTGGTTCCGGCTGAACTCTTGCGGCCTGCAGGGTaGTGGAGCTGGAAGTCTTCTGAAGGACCGGGGTCT +
Preference number: 3 (lower is better)
Translates to: LLVPAELLRPAG*WSWKSSEGPGS
Trigger: AGACCCCGGTCCTTCAGAAGACTTCCAGCTCCATCACCCTGCAGGCCGCAAGAGTTCAGCCGGAACCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp CTCCTGCGCGTACCTTCTGGTCCTCAGGGAACTGGATaGTCTGAGGGGGCATTGCTGCCTTCGGAGGTGTCT +
Preference number: 3 (lower is better)
Translates to: LLRVPSGPQGTG*SEGALLPSEVS
Trigger: AGACACCTCCGAAGGCAGCAATGCCCCCTCAGATCATCCAGTTCCCTGAGGACCAGAAGGTACGCGCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 72 bp TCTGGCTTATCCACGACAGTGAGGTTGACCTGGGCCTaGCTGCTGCCCAGCTTGTTCTCCACCAGCAGTGTG +
Preference number: 3 (lower is better)
Translates to: SGLSTTVRLTWA*LLPSLFSTSSV
Trigger: CACACTGCTGGTGGAGAACAAGCTGGGCAGCAGGCAGGCCCAGGTCAACCTCACTGTCGTGGATAAGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp AGCCACCTCTCTGGGGGCTGGAGCAGTTCTTGCTTTTaGCTGCAGCCTCCAGACTGTCCAGCTTCGACTCCT +
Preference number: 3 (lower is better)
Translates to: SHLSGGWSSSCF*LQPPDCPASTP
Trigger: AGGAGTCGAAGCTGGACAGTCTGGAGGCTGCAGCCAAAAGCAAGAACTGCTCCAGCCCCCAGAGAGGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp CGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTaGTCCGGGCTTTCAGCAGGCAGAGGTAATGGGAGC +
Preference number: 3 (lower is better)
Translates to: RWKQCSCMSHCP*SGLSAGRGNGS
Trigger: GCTCCCATTACCTCTGCCTGCTGAAAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCCAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp GTGTTCTCACTGGCTGGAGCATCATCCACGGTGACTTaGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTG +
Preference number: 3 (lower is better)
Translates to: VFSLAGASSTVT*QEHSAWPASFL
Trigger: CAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGATGCTCCAGCCAGTGAGAACAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTACAACTCGGCCCAGCTaGGTAGCAAACTTTGGTGGG +
Preference number: 3 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPTTRPS*VANFGG
Trigger: CCCACCAAAGTTTGCTACCAAGCTGGGCCGAGTTGT...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTGCCATCGTGAGGCTCTaGTACCGTGAGCACGGCCTG +
Preference number: 3 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVAAIVRL*YREHGL
Trigger: CAGGCCGTGCTCACGGTACAAGAGCCTCACGATGGC...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 72 bp CCCTGCTTGTGGATGTACTCCACTCCCTCCGAGATCTaGCGCATGTACTTGATGCACTCACGCTCCGTCAGC +
Preference number: 3 (lower is better)
Translates to: PCLWMYSTPSEI*RMYLMHSRSVS
Trigger: GCTGACGGAGCGTGAGTGCATCAAGTACATGCGGCAGATCTCGGAGGGAGTGGAGTACATCCACAAGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp AGCCTTTCCACTTGGAGGGTCCAGCTACAGGACAGCTaGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTC +
Preference number: 3 (lower is better)
Translates to: SLSTWRVQLQDS*PWALEAVQLYV
Trigger: GACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAGCTGGACCCTCCAAGTGGAAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp GGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGTCCGGGCTTTCAGCAGGCACACTCCCACGTCATCTaGGTTGACTCCATGGATTTC +
Preference number: 3 (lower is better)
Translates to: GSSAAVCPTVPGPGFQQAHSHVI*VDSMDF
Trigger: GAAATCCATGGAGTCAACCAAGATGACGTGGGAGTG...TGCCTGCTGAAAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp GACACTGGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGTCCTGGCTTTGGGGCTaGCTCTCAAATTTGGGGAAT +
Preference number: 3 (lower is better)
Translates to: DTGEGGGHLHHGKPFHLESWLWG*LSNLGN
Trigger: ATTCCCCAAATTTGAGAGCAAGCCCCAAAGCCAGGA...CTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCCAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 72 bp AAACCTCAATGCTGCCTTCCTGTCTCCTCACGGGGGTaGCTTCCAGGAACCAGGCCACTTCAGGCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: KPQCCLPVSSRG*LPGTRPLQALE
Trigger: TTCCAAAGCCTGAAGTGGCCTGGTTCCTGGAAGGCACCCCCGTGAGGAGACAGGAAGGCAGCATTGAGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp TGTATAAGCCTCTGTCCTCAGGCAGTGCCTTCTCGATaGAGACGGAGCAGAGTGAGCCTTCCTGGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: CISLCPQAVPSR*RRSRVSLPGRG
Trigger: TCCTCTCCCAGGAAGGCTCACTCTGCTCCGTCTCCATCGAGAAGGCACTGCCTGAGGACAGAGGCTTATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp CTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTaGCTACACACTTGTATAAGCCTCTGTCCTCAGGCA +
Preference number: 3 (lower is better)
Translates to: LGRSTPPGQRHS*LHTCISLCPQA
Trigger: TGCCTGAGGACAGAGGCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp AGGAAGAGAGCTCTTGGGCCTCCGGGATTTCATCTCTaGGGCCTTGGTGTTCTCACTGGCTGGAGCATCATC +
Preference number: 3 (lower is better)
Translates to: RKRALGPPGFHL*GLGVLTGWSII
Trigger: GATGATGCTCCAGCCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCTCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGATCATCCACGGTGACTaGGCAGGAGCACTCCGCCTG +
Preference number: 3 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLIIHGD*AGALRL
Trigger: CAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp GTGGCTGAGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGGCCAGGATGGTGAGCTaGCTGCCATTCTCGCTGTTC +
Preference number: 3 (lower is better)
Translates to: VAEVTLAKVSLSLSPMKGARMVS*LPFSLF
Trigger: GAACAGCGAGAATGGCAGCAAGCTCACCATCCTGGC...CCCCTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGTGCCTGCTGCCCAGCTaGTTCTCCACCAGCAGTGTG +
Preference number: 3 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLCLLPS*FSTSSV
Trigger: CACACTGCTGGTGGAGAACAAGCTGGGCAGCAGGCA...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp ATTGGCACTGTCCAAACCTTGGATGGAAAGTTCAGCTaGCATCGAGGCCTTCCCCGACCCGTTCACCACCAG +
Preference number: 3 (lower is better)
Translates to: IGTVQTLDGKFS*HRGLPRPVHHQ
Trigger: CTGGTGGTGAACGGGTCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATCCAAGGTTTGGACAGTGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp TGTACTCCACTCCCTCCGAGATCTGCCGCATGTACTTaGTGCACTCACGCTCCGTCAGCTCAAAGTCCTCGT +
Preference number: 3 (lower is better)
Translates to: CTPLPPRSAACT*CTHAPSAQSPR
Trigger: ACGAGGACTTTGAGCTGACGGAGCGTGAGTGCATCAAGTACATGCGGCAGATCTCGGAGGGAGTGGAGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 72 bp AGTCCCAGATCTCGATGCTGTAGGACTGTACAGCACTaGCCCCATCATATGAGGAGCCATACCAGGACAGGG +
Preference number: 3 (lower is better)
Translates to: SPRSRCCRTVQH*PHHMRSHTRTG
Trigger: CCCTGTCCTGGTATGGCTCCTCATATGATGGGGGCAGTGCTGTACAGTCCTACAGCATCGAGATCTGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp GCATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTaGCCAGCGTCATTCTTGGCTACACACTTGTATAAG +
Preference number: 3 (lower is better)
Translates to: ASSTVTWQEHSA*PASFLATHLYK
Trigger: CTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGATGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCAGTTCTGGGCGAGTCCTaGCATGACTCCAGCTTGGAC +
Preference number: 3 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPVLGES*HDSSLD
Trigger: GTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAAC...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp CCACCAGGCACGTGTACACTCCCACGTCATCTTGGTTaGCTCCATGGATTTCCAGAACCTGCATGCCGTTCT +
Preference number: 3 (lower is better)
Translates to: PPGTCTLPRHLG*LHGFPEPACRS
Trigger: AGAACGGCATGCAGGTTCTGGAAATCCATGGAGTCAACCAAGATGACGTGGGAGTGTACACGTGCCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp ACTTATATTCGTGGTCAGGCAGCAGGTCCTGGACGTTaGAAGAGGTGCTGCGGCATGTGGCTAGTTCCTTCC +
Preference number: 3 (lower is better)
Translates to: TYIRGQAAGPGR*KRCCGMWLVPS
Trigger: GGAAGGAACTAGCCACATGCCGCAGCACCTCTTTCAACGTCCAGGACCTGCTGCCTGACCACGAATATAAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 72 bp GACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTaGCCGTCATTATGGAGAGGCTTGTACCAGCACATA +
Preference number: 3 (lower is better)
Translates to: DPDGCSSHHLMC*PSLWRGLYQHI
Trigger: TATGTGCTGGTACAAGCCTCTCCATAATGACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR GCA 72 bp TGTCCCCATTTTGGGTTGGCTAGAGACCCAGATGGCTaGAGCAGCCACCATCTCATGTGTTGCCCGTCATTA +
Preference number: 3 (lower is better)
Translates to: CPHFGLARDPDG*SSHHLMCCPSL
Trigger: TAATGACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAATGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR GCA 72 bp CCTTCCACGTCTTGTTGGCTGAGTCCCAGATCTCGATaGTGTAGGACTGTACAGCACTGCCCCCATCATATG +
Preference number: 3 (lower is better)
Translates to: PSTSCWLSPRSR*CRTVQHCPHHM
Trigger: CATATGATGGGGGCAGTGCTGTACAGTCCTACAGCATCGAGATCTGGGACTCAGCCAACAAGACGTGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 72 bp CCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTaGTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGC +
Preference number: 3 (lower is better)
Translates to: PFTFLHRFHNEL*CAGGFSKTVDS
Trigger: GCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp GGCTTGCTCTCAAATTTGGGGAATGCTGAATCCCTCTaGCCCTCCATGGGGATTCTCCTGTTAGCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: GLLSNLGNAESL*PSMGILLLAAL
Trigger: CAAGGCTGCTAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGAGAGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp GGGGGTGCCTTCCAGGAACCAGGCCACTTCAGGCTTTaGAATCCCGGAAACTTCACATCTGAACTTGACAGT +
Preference number: 3 (lower is better)
Translates to: GGAFQEPGHFRL*NPGNFTSELDS
Trigger: ACTGTCAAGTTCAGATGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCTGGTTCCTGGAAGGCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp ACACGGAACTTATATTCGTGGTCAGGCAGCAGGTCCTaGACGTTGAAAGAGGTGCTGCGGCATGTGGCTAGT +
Preference number: 3 (lower is better)
Translates to: TRNLYSWSGSRS*TLKEVLRHVAS
Trigger: ACTAGCCACATGCCGCAGCACCTCTTTCAACGTCCAGGACCTGCTGCCTGACCACGAATATAAGTTCCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp TCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTaGTGGAGGCAGTTCATGATGCTAATCTCCTGCCGG +
Preference number: 3 (lower is better)
Translates to: SSKASTHWTSLG*WRQFMMLISCR
Trigger: CCGGCAGGAGATTAGCATCATGAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp AGAGCTCTTGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTGGCTTCTTGGCTACACACTaGTATAAGCCTCTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: RALGPPGFHLWGLGVLTGFLATH*YKPLSS
Trigger: TGAGGACAGAGGCTTATACAAGTGTGTAGCCAAGAA...GCCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCGCCTTCGGAGGTGTCTaGGGGGCAGGTTTCTTTTTC +
Preference number: 3 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFAFGGV*GAGFFF
Trigger: GAAAAAGAAACCTGCCCCCAAGACACCTCCGAAGGC...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTATGGCTCTCACAGCATaGCCCGTTTTCTGCCATTTC +
Preference number: 3 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVAMALTA*PVFCHF
Trigger: GAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCAT...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp TGCTTTCGGAACTTCATCCAGGTACAGGTGATGGGCTaGGTGCCTGTCACTTTGCCAAACAGCTCCACTGAC +
Preference number: 3 (lower is better)
Translates to: CFRNFIQVQVMG*VPVTLPNSSTD
Trigger: GTCAGTGGAGCTGTTTGGCAAAGTGACAGGCACTCAGCCCATCACCTGTACCTGGATGAAGTTCCGAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp CAAACAGCTCCCCTCCTGACACGATCTCCAGGACCATaGCGATGTTGGCCTTTTCTTCAAAGGCATCCACAC +
Preference number: 3 (lower is better)
Translates to: QTAPLLTRSPGP*RCWPFLQRHPH
Trigger: GTGTGGATGCCTTTGAAGAAAAGGCCAACATCGTCATGGTCCTGGAGATCGTGTCAGGAGGGGAGCTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp ATCGTAGTCTATCTGGAAGTGGCGGGACTCCCTGATTaGCTGGTCATCTTTGAACCAGACAACCTCGGGGTC +
Preference number: 3 (lower is better)
Translates to: IVVYLEVAGLPD*LVIFEPDNLGV
Trigger: GACCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAATCAGGGAGTCCCGCCACTTCCAGATAGACTACGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp TCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTaGAGGCAGTTCATGATGCTAATCTCCTGCCGGATA +
Preference number: 3 (lower is better)
Translates to: SKASTHWTSLGW*RQFMMLISCRI
Trigger: TATCCGGCAGGAGATTAGCATCATGAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTCTCCTGTTAGCAGCCTaGCTCACAACATCTTGGCTC +
Preference number: 3 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLLLLAA*LTTSWL
Trigger: GAGCCAAGATGTTGTGAGCAAGGCTGCTAACAGGAG...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCTCGCCAACCCGGTTCTaGAGCAGGATCTCATACTGG +
Preference number: 3 (lower is better)
Translates to: SLPMALTALPVFCHFLLASPTRF*SRISYW
Trigger: CCAGTATGAGATCCTGCTCAAGAACCGGGTTGGCGA...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACAATCCTGGTGCCCGTCTaGTTGACACACATGATGTTC +
Preference number: 3 (lower is better)
Translates to: PRLLTALQVYLASSSPQTILVPV*LTHMMF
Trigger: GAACATCATGTGTGTCAACAAGACGGGCACCAGGAT...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp GTGGCTGAGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGCCAGCTTCGACTCCTTaGAGATTACATTGGTCACCT +
Preference number: 3 (lower is better)
Translates to: VAEVTLAKVSLSLSPMKGPASTP*RLHWSP
Trigger: AGGTGACCAATGTAATCTCAAAGGAGTCGAAGCTGG...CCCCTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCAGGCCACTTCAGGCTTaGGAATCCCGGAAACTTCAC +
Preference number: 3 (lower is better)
Translates to: SLPMALTALPVFCHFLLARPLQA*ESRKLH
Trigger: GTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCT...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGGGCAAGCCTTTCCACTaGGAGGGTCCAGCTACAGGA +
Preference number: 3 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSGKPFH*EGPATG
Trigger: TCCTGTAGCTGGACCCTCCAAGTGGAAAGGCTTGCC...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGCTGGTTCCATACACGTaGATTGCACGTACACGGAAC +
Preference number: 3 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLLVPYT*IARTRN
Trigger: GTTCCGTGTACGTGCAATCAACGTGTATGGAACCAG...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTTCTAGTTTTTCTGCATaGAGCGGGCTGGTTGGTGAC +
Preference number: 3 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLSSFSA*SGLVGD
Trigger: GTCACCAACCAGCCCGCTCAATGCAGAAAAACTAGA...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 72 bp ACGTCATCTTGGTTGACTCCATGGATTTCCAGAACCTaGATGCCGTTCTTCTCAGACACAGACACACGGGCA +
Preference number: 3 (lower is better)
Translates to: TSSWLTPWISRT*MPFFSDTDTRA
Trigger: TGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATGGAGTCAACCAAGATGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 72 bp CTCCTGGCTTGGCTCACTGGTTCCATACACGTTGATTaGACGTACACGGAACTTATATTCGTGGTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: LLAWLTGSIHVD*TYTELIFVVRQ
Trigger: CTGCCTGACCACGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAGCCAGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp TGCAGCAGCCACCATCTCATGTGTTGCCCGTCATTATaGAGAGGCTTGTACCAGCACATAAATGCTCTGGTC +
Preference number: 3 (lower is better)
Translates to: CSSHHLMCCPSL*RGLYQHINALV
Trigger: GACCAGAGCATTTATGTGCTGGTACAAGCCTCTCCATAATGACGGGCAACACATGAGATGGTGGCTGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR CCA 72 bp CACGTGTACACTCCCACGTCATCTTGGTTGACTCCATaGATTTCCAGAACCTGCATGCCGTTCTTCTCAGAC +
Preference number: 3 (lower is better)
Translates to: HVYTPTSSWLTP*ISRTCMPFFSD
Trigger: GTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATGGAGTCAACCAAGATGACGTGGGAGTGTACACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp TCACAAATGACCTATTGGCACTGTCCAAACCTTGGATaGAAAGTTCAGCTGACATCGAGGCCTTCCCCGACC +
Preference number: 3 (lower is better)
Translates to: SQMTYWHCPNLG*KVQLTSRPSPT
Trigger: GGTCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATCCAAGGTTTGGACAGTGCCAATAGGTCATTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp ACGATGTTGGCCTTTTCTTCAAAGGCATCCACACACTaGACCAGCTTAGGGTGGTGGAGGCAGTTCATGATG +
Preference number: 3 (lower is better)
Translates to: TMLAFSSKASTH*TSLGWWRQFMM
Trigger: CATCATGAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAAGGCCAACATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCCCCACGTCATCTTGGTaGACTCCATGGATTTCCAGA +
Preference number: 3 (lower is better)
Translates to: SLPMALTALPVFCHFLLAPTSSW*TPWISR
Trigger: TCTGGAAATCCATGGAGTCAACCAAGATGACGTGGG...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCACTCACAAATGACCTATaGGCACTGTCCAAACCTTGG +
Preference number: 3 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPLTNDL*ALSKPW
Trigger: CCAAGGTTTGGACAGTGCCAATAGGTCATTTGTGAG...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp CAGACTCCTGGCTTGGCTCACTGGTTCCATACACGTTaGTTGCACGTACACGGAACTTATATTCGTGGTCAG +
Preference number: 3 (lower is better)
Translates to: QTPGLAHWFHTR*LHVHGTYIRGQ
Trigger: CTGACCACGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAGCCAGGAGTCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp TACACGTTGATTGCACGTACACGGAACTTATATTCGTaGTCAGGCAGCAGGTCCTGGACGTTGAAAGAGGTG +
Preference number: 3 (lower is better)
Translates to: YTLIARTRNLYS*SGSRSWTLKEV
Trigger: CACCTCTTTCAACGTCCAGGACCTGCTGCCTGACCACGAATATAAGTTCCGTGTACGTGCAATCAACGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CCA 72 bp TCAGGTTTCTCTCCTACCGTTGTGAGTTCAGACTCCTaGCTTGGCTCACTGGTTCCATACACGTTGATTGCA +
Preference number: 3 (lower is better)
Translates to: SGFSPTVVSSDS*LGSLVPYTLIA
Trigger: TGCAATCAACGTGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGAACTCACAACGGTAGGAGAGAAACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGTGTGGCCCAGAACTCTaGTTTTGGCCTTATTTTTCA +
Preference number: 3 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGCGPEL*FWPYFS
Trigger: TGAAAAATAAGGCCAAAACAAGAGTTCTGGGCCACA...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR-3UTR CAA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGCTTTCAGAAATGAATaGCTGGAGTACTGGGAGAAA +
Preference number: 3 (lower is better)
Translates to: TRTSHMAPSNQEAESEALAFRNE*LEYWEK
Trigger: TTTCTCCCAGTACTCCAGCAATTCATTTCTGAAAGC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR TCA 72 bp GGGACACATCTTCTTCAGATTCTAGTTTTTCTGCATTaGGCGGGCTGGTTGGTGACCCTGTTGAGGATTTCC +
Preference number: 3 (lower is better)
Translates to: GTHLLQILVFLH*AGWLVTLLRIS
Trigger: GGAAATCCTCAACAGGGTCACCAACCAGCCCGCTCAATGCAGAAAAACTAGAATCTGAAGAAGATGTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp GTAATGCGAGCAATGGGGATCGGCTGTAAATATAGATaGTGCTTTGCTCACTTGCCCACTGCTAACCTCCTT +
Preference number: 3 (lower is better)
Translates to: VMRAMGIGCKYR*CFAHLPTANLL
Trigger: AAGGAGGTTAGCAGTGGGCAAGTGAGCAAAGCATCATCTATATTTACAGCCGATCCCCATTGCTCGCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR TCA 72 bp TCCATGTTCTTGGTATCTTTCATTAGCCATGGATGCTaGAGGCACTGCGTGCAGTCCAGGCGGTTTTTCATA +
Preference number: 3 (lower is better)
Translates to: SMFLVSFISHGC*RHCVQSRRFFI
Trigger: TATGAAAAACCGCCTGGACTGCACGCAGTGCCTTCAGCATCCATGGCTAATGAAAGATACCAAGAACATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 72 bp TTAGGGTGGTGGAGGCAGTTCATGATGCTAATCTCCTaGCGGATATTCTCTTTCTCTTTTGCTGAATATGCC +
Preference number: 3 (lower is better)
Translates to: LGWWRQFMMLIS*RIFSFSFAEYA
Trigger: GGCATATTCAGCAAAAGAGAAAGAGAATATCCGGCAGGAGATTAGCATCATGAACTGCCTCCACCACCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR GCA 72 bp TATCTTTCATTAGCCATGGATGCTGAAGGCACTGCGTaGAGTCCAGGCGGTTTTTCATATCTTTCTTCAGCA +
Preference number: 3 (lower is better)
Translates to: YLSLAMDAEGTA*SPGGFSYLSSA
Trigger: TGCTGAAGAAAGATATGAAAAACCGCCTGGACTGCACGCAGTGCCTTCAGCATCCATGGCTAATGAAAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATTGTGGCCCAGAACTCTaGTTTTGGCCTTATTTTTCA +
Preference number: 3 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDCGPEL*FWPYFS
Trigger: TGAAAAATAAGGCCAAAACAAGAGTTCTGGGCCACA...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR TCA 72 bp AGCATAATGTCCTTAATGCTTACACTCATGACAAGTTaGGAGTCAGCAAAACTGGCAGGTGGAAGGGGAAAG +
Preference number: 3 (lower is better)
Translates to: SIMSLMLTLMTS*ESAKLAGGRGK
Trigger: CTTTCCCCTTCCACCTGCCAGTTTTGCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR CCA 72 bp ATTTCCTTCTTGCCATGTACTTCTTCATCCGGTCCTTaGAGAGTTTCTTGGCCTCCATGTTCTTGGTATCTT +
Preference number: 3 (lower is better)
Translates to: ISFLPCTSSSGP*RVSWPPCSWYL
Trigger: AAGATACCAAGAACATGGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGAAGTACATGGCAAGAAGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR TCA 72 bp CAATGTCGTAGAAGTCAGATACTTTTTGTTCAGTATTaGTTGTCACTGTCCGGTAATCAACCTCGGGCTCCT +
Preference number: 3 (lower is better)
Translates to: QCRRSQILFVQY*LSLSGNQPRAP
Trigger: AGGAGCCCGAGGTTGATTACCGGACAGTGACAATCAATACTGAACAAAAAGTATCTGACTTCTACGACATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTGTGGCCCAGAACTCTaGTTTTGGCCTTATTTTTCA +
Preference number: 3 (lower is better)
Translates to: CLKLLDICKEGISLDFLLCGPEL*FWPYFS
Trigger: TGAAAAATAAGGCCAAAACAAGAGTTCTGGGCCACA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGAGAGAAATGGAGAGTTaGAACATCTGCAGTGTACTT +
Preference number: 3 (lower is better)
Translates to: CLKLLDICKEGISLDFLLREMES*NICSVL
Trigger: AAGTACACTGCAGATGTTCAAACTCTCCATTTCTCT...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
3UTR-3UTR CAA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCCAGCTCTTTATCAGTaGAAATCTGTTTCATCGTGG +
Preference number: 3 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEPALYQ*KSVSSW
Trigger: CCACGATGAAACAGATTTCAACTGATAAAGAGCTGG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CAA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACCCAGAACTCTTGTTTaGGCCTTATTTTTCATGAGC +
Preference number: 3 (lower is better)
Translates to: THNIHAHKGYILNTKVIEPRTLV*ALFFMS
Trigger: GCTCATGAAAAATAAGGCCAAAACAAGAGTTCTGGG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAGAGAAATGGAGAGTTaGAACATCTGCAGTGTACTT +
Preference number: 3 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLREMES*NICSVL
Trigger: AAGTACACTGCAGATGTTCAAACTCTCCATTTCTCT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR-3UTR CAA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAAGAGAAATGGAGAGTTaGAACATCTGCAGTGTACTT +
Preference number: 3 (lower is better)
Translates to: THNIHAHKGYILNTKVIEREMES*NICSVL
Trigger: AAGTACACTGCAGATGTTCAAACTCTCCATTTCTCT...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGTTGGGGCCGGCCAGTaGTCTTGCAGGAGAATCGTC +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPVGAGQ*SCRRIV
Trigger: GACGATTCTCCTGCAAGATCACTGGCCGGCCCCAAC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGAGCATCATCCACGGTaGCTTGGCAGGAGCACTCCG +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPEHHPR*LGRSTP
Trigger: CGGAGTGCTCCTGCCAAGTCACCGTGGATGATGCTC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCACTCCTGAAGTTGCTCTaGACTGCAGCAGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPLLKLL*TAAEAA
Trigger: GGCTGCCTCTGCTGCAGTTCAGAGCAACTTCAGGAG...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCACCGCTGGTGATGGGTTaGCCGTTTCTGTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPPLVMG*PFLCHV
Trigger: GACATGGCACAGAAACGGGCAACCCATCACCAGCGG...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATTCCGGCTGAACTCTTaGGGCCTGCAGGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPFRLNS*GLQGDG
Trigger: TCCATCACCCTGCAGGCCGCAAGAGTTCAGCCGGAA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATGCATGACTCCAGCTTaGACTCCCTTGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPCMTPA*TPLGAE
Trigger: CTCAGCCCCCAAGGGAGTCCAAGCTGGAGTCATGCA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTACAGGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGCAGCCGCAGTGCTCCTaGCGCGCGGCCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LQDSWPWALEAVQLYVPLQPQCS*RAARMV
Trigger: CACCATCCTGGCCGCGCGCCAGGAGCACTGCGGCTG...CAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 72 bp TGGGCGAGTCCTTGCATGACTCCAGCTTGGACTCCCTaGGGGGCTGAGGCTGGCTGTTTGCAGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: WASPCMTPAWTP*GAEAGCLQPRV
Trigger: CACCCTGGGCTGCAAACAGCCAGCCTCAGCCCCCAAGGGAGTCCAAGCTGGAGTCATGCAAGGACTCGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GACACTGGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGACTCCCTTGGGGGCTaGGGCTGGCTGTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: DTGEGGGHLHHGKPFHLEDSLGG*GWLFAA
Trigger: GGCTGCAAACAGCCAGCCTCAGCCCCCAAGGGAGTC...CTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCCAGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCACCATCGTTTCCACAATaGGCTCTGCTGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPPSFPQ*ALLCRW
Trigger: CCACCTGCACAGCAGAGCTCATTGTGGAAACGATGG...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGCAAGCCTTTCCACTTaGAGGGTCCAGCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPASLST*RVQLQD
Trigger: GTCCTGTAGCTGGACCCTCCAAGTGGAAAGGCTTGC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCAGGCTCCCTCCCCCGTaGAAGGGCTCTGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGRLPPP*KGSGRA
Trigger: AGCTCTGCCAGAGCCCTTCCACGGGGGAGGGAGCCT...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCACCTTGGTGTTCTCACTaGCTGGAGCATCATCCACGG +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPPWCSH*LEHHPR
Trigger: CCGTGGATGATGCTCCAGCCAGTGAGAACACCAAGG...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATGCTCCACATGTCTGTaGCGTAGCCGATGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPCSTCL*RSRWAH
Trigger: ATGAGCCCATCGGCTACGCCACAGACATGTGGAGCA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTAGCGGCCCCCGCTGGTaGTGGGTTGCCCGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARSGPRW*WVARFC
Trigger: ACAGAAACGGGCAACCCATCACCAGCGGGGGCCGCT...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGAGCTGGAAGTCTTCTaGAGGACCGGGGTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPELEVF*RTGVCG
Trigger: CCCGCAGACCCCGGTCCTTCAGAAGACTTCCAGCTC...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCGCTCTTGGTTCCGGCTaGACTCTTGCGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGALGSG*TLAACR
Trigger: CCTGCAGGCCGCAAGAGTTCAGCCGGAACCAAGAGC...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCAGAGCATCATCCACGGTaGCTTGGCAGGAGCACTCCG +
Preference number: 4 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPEHHPR*LGRSTP
Trigger: CGGAGTGCTCCTGCCAAGTCACCGTGGATGATGCTC...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAAGGATTTCCTGCCACTaGGCCCTGAGATCATTGCCA +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPRISCH*ALRSLP
Trigger: TGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCT...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR GCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTTTGAGCCAGGTGACCTaGGGTTGGGGCCGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARLSQVT*GWGRPV
Trigger: CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAA...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGGAGATCTCATCGAATaGCTCGTCGTCGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPGDLIE*LVVEVP
Trigger: TGGGACTTCGACGACGAGGCATTCGATGAGATCTCC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360304.8
CDS-3UTR GCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATTCCACAATGAGCTCTaGTGTGCAGGTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPFHNEL*CAGGFS
Trigger: GGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCATCATCCACGGTGACTTaGCAGGAGCACTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPSSTVT*QEHSAW
Trigger: CCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGA...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCACAGTGAGGTTGACCTaGGCCTGCCTGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGTVRLT*ACLLPS
Trigger: GCTGGGCAGCAGGCAGGCCCAGGTCAACCTCACTGT...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGTCCGGGCTTTCAGCAGGCAACAGGAAAGGCGTCCTaGAGCTCTCGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GSSAAVCPTVPGPGFQQATGKAS*SSRLGS
Trigger: GCTTCCCAGCCGAGAGCTTCAGGACGCCTTTCCTGT...TGCCTGCTGAAAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTGAGCTGGAAGTCTTCTaGAGGACCGGGGTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARELEVF*RTGVCG
Trigger: CCCGCAGACCCCGGTCCTTCAGAAGACTTCCAGCTC...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCATTGCGGCCTGCAGGGTaGTGGAGCTGGAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPLRPAG*WSWKSS
Trigger: AGAAGACTTCCAGCTCCATCACCCTGCAGGCCGCAA...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAAAATTTGGGGAATGCTaGATCCCTCTGGCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPKFGEC*IPLALH
Trigger: ATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTT...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTGTCTCCTCACGGGGGTaGCTTCCAGGAACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARVSSRG*LPGTRP
Trigger: TGGCCTGGTTCCTGGAAGGCACCCCCGTGAGGAGAC...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGAGCACCACTGCCATTaGTGGCTTCACAGGTATACT +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPEHHCH*WLHRYT
Trigger: AGTATACCTGTGAAGCCACCAATGGCAGTGGTGCTC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGTTGCTCACAACATCTTaGCTCCCCAGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CSGTFPLSQVTCGWGRPVLLTTS*LPRPGC
Trigger: GCAGCCTGGCCTGGGGAGCCAAGATGTTGTGAGCAA...CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGACAACCTCGGGGTCTaGGTATCCTTCAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPDNLGV*VSFNLA
Trigger: TGCAAGATTGAAGGATACCCAGACCCCGAGGTTGTC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGAGAGTCAGCAAAACTaGCAGGTGGAAGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPESQQN*QVEGER
Trigger: TCTTTCCCCTTCCACCTGCCAGTTTTGCTGACTCTC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATTGAGGGATCCACACTaGGGGAGGTTTTGGAAATGT +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPLRDPH*GRFWKC
Trigger: ACATTTCCAAAACCTCCCTCAGTGTGGATCCCTCAA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTGTTGGGGCCGGCCAGTaGTCTTGCAGGAGAATCGTC +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARVGAGQ*SCRRIV
Trigger: GACGATTCTCCTGCAAGATCACTGGCCGGCCCCAAC...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTCCAGGACAGGGTCAGTaGGGAGCTCCGAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPPGQGQ*GAPNVR
Trigger: TCTGACATTCGGAGCTCCTCACTGACCCTGTCCTGG...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCACCATCGTTTCCACAATaGGCTCTGCTGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPPSFPQ*ALLCRW
Trigger: CCACCTGCACAGCAGAGCTCATTGTGGAAACGATGG...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGAGCTAAGGCCCTGGTaGTTGCAGTTAAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPELRPW*LQLKCR
Trigger: TCTGCATTTTAACTGCAATCACCAGGGCCTTAGCTC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGTCTGTCCTCAGGCAGTaGCTTCTCGATGGAGACGGA +
Preference number: 4 (lower is better)
Translates to: CSGTFPLSQVTCGWGRPVSVLRQ*LLDGDG
Trigger: TCCGTCTCCATCGAGAAGGCACTGCCTGAGGACAGA...CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCACCTAATTCAAACTCCTaGACCTGGGAGCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPPNSNS*TWEHFL
Trigger: GAGGAAATGCTCCCAGGTGCAGGAGTTTGAATTAGG...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCCAGGCCTGGTGCTCTTaGTTCCGGCTGAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGQAWCS*FRLNSC
Trigger: GCAAGAGTTCAGCCGGAACCAAGAGCACCAGGCCTG...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCGCTGGCCTTGGGCGTTaGAAGCAGTGCAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGAGLGR*KQCSCM
Trigger: CATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGC...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGTCCGGGCTTTCAGCAGGCAAGTCCTTCAGGACACTaGAGAAGGAGGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GSSAAVCPTVPGPGFQQASPSGH*RRRGPP
Trigger: AGGTGGCCCCCTCCTTCTCCAGTGTCCTGAAGGACT...TGCCTGCTGAAAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGCCTTGGTGTTCTCACTaGCTGGAGCATCATCCACGG +
Preference number: 4 (lower is better)
Translates to: CSGTFPLSQVTCGWGRPVPWCSH*LEHHPR
Trigger: CCGTGGATGATGCTCCAGCCAGTGAGAACACCAAGG...CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCAAAGGCATCCACACACTaGACCAGCTTAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPKASTH*TSLGWW
Trigger: CCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTT...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 72 bp GGTGTTCTCACTGGCTGGAGCATCATCCACGGTGACTaGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTT +
Preference number: 4 (lower is better)
Translates to: GVLTGWSIIHGD*AGALRLASVIL
Trigger: AAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGATGCTCCAGCCAGTGAGAACACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTCGGCTGGGAAGCTCCTaGAGTTGCTCTGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARRLGSS*SCSELQ
Trigger: CTGCAGTTCAGAGCAACTTCAGGAGCTTCCCAGCCG...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGTCCGGGCTTTCAGCAGGCACCATCTGTCCTTCTTTaGCCACAACTCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSAAVCPTVPGPGFQQAPSVLL*PQLGPA
Trigger: AGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGG...TGCCTGCTGAAAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp TTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAGCAGCCGTTGGGGCCGGCCAGTaGTCTTGCAGGAGAATCGTC +
Preference number: 4 (lower is better)
Translates to: LGNAESLWPSMGILLLAAVGAGQ*SCRRIV
Trigger: GACGATTCTCCTGCAAGATCACTGGCCGGCCCCAAC...GGCTGCTAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTTTGCGGCCTGCAGGGTaGTGGAGCTGGAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARLRPAG*WSWKSS
Trigger: AGAAGACTTCCAGCTCCATCACCCTGCAGGCCGCAA...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTGCCAAACAGCTCCACTaGCTCTCCTGCGCGTACCTT +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARAKQLH*LSCAYL
Trigger: AAGGTACGCGCAGGAGAGTCAGTGGAGCTGTTTGGC...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GCCTTCCAGGAACCAGGCCACTTCAGGCTTTGGAATCCCGGAAACTTCACATCTGCGCGGCCAGGATGGTaGGCTTGCTGCCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: AFQEPGHFRLWNPGNFTSARPGW*ACCHSR
Trigger: GCGAGAATGGCAGCAAGCTCACCATCCTGGCCGCGC...AGATGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCTGGTTCCTGGAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGTCCGGGCTTTCAGCAGGCATCTGCCGCATGTACTTaGTGCACTCACGCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: GSSAAVCPTVPGPGFQQASAACT*CTHAPS
Trigger: TGACGGAGCGTGAGTGCATCAAGTACATGCGGCAGA...TGCCTGCTGAAAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCACTTCATAAACCTCAATaGTGCCTTCCTGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPLHKPQ*CLPVSS
Trigger: TGAGGAGACAGGAAGGCAGCATTGAGGTTTATGAAG...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGTCCGGGCTTTCAGCAGGCAGGGCGTTGGAAGCAGTaGAGCTGTATGTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: GSSAAVCPTVPGPGFQQAGRWKQ*SCMSHC
Trigger: ACAGTGGGACATACAGCTGCACTGCTTCCAACGCCC...TGCCTGCTGAAAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCGGTCCAGGTGCACGATaGCCTGCTTGTGGATGTACT +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGGPGAR*PACGCT
Trigger: AGTACATCCACAAGCAGGGCATCGTGCACCTGGACC...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp GACACTGGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGCTGAAGGCACTGCGTaGAGTCCAGGCGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: DTGEGGGHLHHGKPFHLEAEGTA*SPGGFS
Trigger: TGAAAAACCGCCTGGACTGCACGCAGTGCCTTCAGC...CTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCCAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp TGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGTTCCACAATGAGCTCTaGTGTGCAGGTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CSGTFPLSQVTCGWGRPVFHNEL*CAGGFS
Trigger: GGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA...CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATGTCCAAACCTTGGATaGAAAGTTCAGCTGACATCG +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPCPNLG*KVQLTS
Trigger: CGATGTCAGCTGAACTTTCCATCCAAGGTTTGGACA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCCACCTCTCTGGGGGCTaGAGCAGTTCTTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGHLSGG*SSSCFW
Trigger: CCAAAAGCAAGAACTGCTCCAGCCCCCAGAGAGGTG...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGCTTGCTCTCAAATTTaGGGAATGCTGAATCCCTCT +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPACSQI*GMLNPS
Trigger: AGAGGGATTCAGCATTCCCCAAATTTGAGAGCAAGC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTGCTGGCCTTGGGCGTTaGAAGCAGTGCAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARAGLGR*KQCSCM
Trigger: CATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGC...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTCAGCTACAGGACAGCTaGCCTTGGGCGTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARQLQDS*PWALEA
Trigger: TGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAGCTG...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTAGTCCTTCAGGACACTaGAGAAGGAGGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARSPSGH*RRRGPP
Trigger: AGGTGGCCCCCTCCTTCTCCAGTGTCCTGAAGGACT...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACAGTGATCCGGGGCACTaGGGTCCCCCGTACGGAGCA +
Preference number: 4 (lower is better)
Translates to: HGFPEPACRSSQTQTHGHSDPGH*GPPYGA
Trigger: TGCTCCGTACGGGGGACCCCAGTGCCCCGGATCACT...GTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGCTACTCTTCTTTTCATaGACGGTGACCCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CSGTFPLSQVTCGWGRPVLLFFS*TVTQAL
Trigger: CAGCGCCTGGGTCACCGTCCATGAAAAGAAGAGTAG...CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CTACAGGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGGCAGTGCCTTCTCGATaGAGACGGAGCAGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: LQDSWPWALEAVQLYVPLAVPSR*RRSRVS
Trigger: GCTCACTCTGCTCCGTCTCCATCGAGAAGGCACTGC...CAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGTGTTCTCACTGGCTaGAGCATCATCCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPGVLTG*SIIHGD
Trigger: GTCACCGTGGATGATGCTCCAGCCAGTGAGAACACC...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGACTCCCTGATTGACTaGTCATCTTTGAACCAGACA +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPDSLID*SSLNQT
Trigger: TGTCTGGTTCAAAGATGACCAGTCAATCAGGGAGTC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATCAAACTCCTGCACCTaGGAGCATTTCCTCATAATC +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPSNSCT*EHFLII
Trigger: GATTATGAGGAAATGCTCCCAGGTGCAGGAGTTTGA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTGGGCGAGTCCTTGCATaGCTCCAGCTTGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVAGRVLA*LQLGLP
Trigger: AGGGAGTCCAAGCTGGAGTCATGCAAGGACTCGCCC...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGCTCTTGGTTCCGGCTaGACTCTTGCGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALALGSG*TLAACR
Trigger: CCTGCAGGCCGCAAGAGTTCAGCCGGAACCAAGAGC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGAAATTTGGGGAATGCTaGATCCCTCTGGCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: CSGTFPLSQVTCGWGRPVKFGEC*IPLALH
Trigger: ATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTT...CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTAGGATTTCCTGCCACTaGGCCCTGAGATCATTGCCA +
Preference number: 4 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPRISCH*ALRSLP
Trigger: TGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCT...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCACCAGTTTTATGCCTTTaGGCTGACAATTGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPPVLCL*ADNWLL
Trigger: CAACAACCAATTGTCAGCTCAAAGGCATAAAACTGG...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGTCCGGGCTTTCAGCAGGCATTCTGGGCGAGTCCTTaGATGACTCCAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: GSSAAVCPTVPGPGFQQAFWASP*MTPAWT
Trigger: AGTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAA...TGCCTGCTGAAAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp TTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAGCAGCCTTCCGGCTGAACTCTTaGGGCCTGCAGGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: LGNAESLWPSMGILLLAAFRLNS*GLQGDG
Trigger: TCCATCACCCTGCAGGCCGCAAGAGTTCAGCCGGAA...GGCTGCTAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGGACCCCCAGGCCTGGTaGTCTTGGTTCCGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGDPQAW*SWFRLN
Trigger: GTTCAGCCGGAACCAAGAGCACCAGGCCTGGGGGTC...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GCCTTCCAGGAACCAGGCCACTTCAGGCTTTGGAATCCCGGAAACTTCACATCTCCTGGGCCTGCCTGCTaGCCAGCTTGTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: AFQEPGHFRLWNPGNFTSPGPAC*PACSPP
Trigger: TGGTGGAGAACAAGCTGGGCAGCAGGCAGGCCCAGG...AGATGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCTGGTTCCTGGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCACTCCCTCCGAGATCTaGCGCATGTACTTGATGCAC +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGTPSEI*RMYLMH
Trigger: GTGCATCAAGTACATGCGGCAGATCTCGGAGGGAGT...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTGGTCCAGGTGCACGATaGCCTGCTTGTGGATGTACT +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARGPGAR*PACGCT
Trigger: AGTACATCCACAAGCAGGGCATCGTGCACCTGGACC...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GCCTTCCAGGAACCAGGCCACTTCAGGCTTTGGAATCCCGGAAACTTCACATCTGGGGAGCCACCTCTCTaGGGGCTGGAGCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: AFQEPGHFRLWNPGNFTSGEPPL*GLEQFL
Trigger: CAAGAACTGCTCCAGCCCCCAGAGAGGTGGCTCCCC...AGATGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCTGGTTCCTGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTAGGCTCCCTCCCCCGTaGAAGGGCTCTGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVRLPPP*KGSGRA
Trigger: AGCTCTGCCAGAGCCCTTCCACGGGGGAGGGAGCCT...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAAGAGGTCCTCGCAGCTaGCAGGCTCCCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SNLGNAESLWPSMGILLLRGPRS*QAPSPV
Trigger: CACGGGGGAGGGAGCCTGCCAGCTGCGAGGACCTCT...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTGGGTCTCGGCAGGCTTaGCGTTGCCCATTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVAGSRQA*RCPLAS
Trigger: TGAAGCCAATGGGCAACGCCAAGCCTGCCGAGACCC...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp AGAGCTCTTGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTGGCAGGTGCTGCGGCATGTaGCTAGTTCCTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: RALGPPGFHLWGLGVLTGRCCGM*LVPSTS
Trigger: AGACGTGGAAGGAACTAGCCACATGCCGCAGCACCT...GCCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTACGATGCCCTGCTTGTaGATGTACTCCACTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARTMPCL*MYSTPS
Trigger: GGAGGGAGTGGAGTACATCCACAAGCAGGGCATCGT...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATCTGGGAGATGTTACTaGTTCAACCTGTTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPSGRCY*FNLFVV
Trigger: CACAACAAACAGGTTGAACCAGTAACATCTCCCAGA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
3UTR CAA 72 bp TTCCACTTGGAGGGTCCAGCTACAGGACAGCTGGCCTaGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACT +
Preference number: 4 (lower is better)
Translates to: FHLEGPATGQLA*GVGSSAAVCPT
Trigger: AGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAGCTGGACCCTCCAAGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 72 bp TCACTCTCAGTTCCTAGCACGGGAGGAAGAGAGCTCTaGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SLSVPSTGGREL*GLRDFISGALV
Trigger: CACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCTCTTCCTCCCGTGCTAGGAACTGAGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGGGGCGAGTCCTTGCATaGCTCCAGCTTGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGGRVLA*LQLGLP
Trigger: AGGGAGTCCAAGCTGGAGTCATGCAAGGACTCGCCC...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCTCTTGGTTCCGGCTaGACTCTTGCGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVALGSG*TLAACR
Trigger: CCTGCAGGCCGCAAGAGTTCAGCCGGAACCAAGAGC...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp CATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACGGAGACGGAGCAGAGTaGGCCTTCCTGGGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: HGFPEPACRSSQTQTHGHGDGAE*AFLGED
Trigger: ATCCTCTCCCAGGAAGGCTCACTCTGCTCCGTCTCC...GTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp TGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGTGGTTCCATACACGTTaGTTGCACGTACACGGAACT +
Preference number: 4 (lower is better)
Translates to: CSGTFPLSQVTCGWGRPVWFHTR*LHVHGT
Trigger: AGTTCCGTGTACGTGCAATCAACGTGTATGGAACCA...CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGTCCGGGCTTTCAGCAGGCACGATCTCCAGGACCATaGCGATGTTGGCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GSSAAVCPTVPGPGFQQARSPGP*RCWPFL
Trigger: AAGAAAAGGCCAACATCGTCATGGTCCTGGAGATCG...TGCCTGCTGAAAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCTACACACTTGTATAAGCCTGAAGTCCCAGGTGGCTaGGGTAACGTTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: QEHSAWPASFLATHLYKPEVPGG*GNVGQG
Trigger: ACCTTGGCCAACGTTACCTCAGCCACCTGGGACTTC...AGGCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTTTGACTGGTCATCTTTaGACCAGACAACCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPLTGHL*TRQPRG
Trigger: ACCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAA...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTTTCTGGGCGAGTCCTTaGATGACTCCAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARFWASP*MTPAWT
Trigger: AGTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAA...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCAGACCCCCAGGCCTGGTaGTCTTGGTTCCGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPDPQAW*SWFRLN
Trigger: GTTCAGCCGGAACCAAGAGCACCAGGCCTGGGGGTC...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTACCCCGTACGGAGCACTaGAGCACAAAATCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALPRTEH*STKSWP
Trigger: GGGCCAGGATTTTGTGCTGCAGTGCTCCGTACGGGG...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GACACTGGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGCCACAAATTCTGGGGTaGCAAAGAGGACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: DTGEGGGHLHHGKPFHLEPQILG*QRGPSE
Trigger: CTCTGAAGGTCCTCTTTGGCACCCCAGAATTTGTGG...CTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCCAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAAAGCTGCTAGACATCTaGAAAGAGGGGATAAGTTTA +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPKLLDI*KEGISL
Trigger: TAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTT...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp AGAGCTCTTGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTGGCGTTTGTTGTGGCAACTaGGCCAGTGGGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: RALGPPGFHLWGLGVLTGVCCGN*ASGTGK
Trigger: CTTTCCTGTCCCACTGGCCCAGTTGCCACAACAAAC...GCCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAGCAGCCGGCACTCGGCTGCAGTaGAACATTTCCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LGNAESLWPSMGILLLAAGTRLQ*NISLEP
Trigger: TGGCTCAAGGGAAATGTTCCACTGCAGCCGAGTGCC...GGCTGCTAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGTCTGCGGGGCCGTTCTaGGCGAGTCCTTGCATGACT +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGSAGPF*ASPCMT
Trigger: AGTCATGCAAGGACTCGCCCAGAACGGCCCCGCAGA...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGTGGACGGGGAGGAGCTaGCCTCTTCCTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGWTGRS*PLPLFS
Trigger: GGAGAAGAGAGGAAGAGGCCAGCTCCTCCCCGTCCA...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCGGCCACTTCAGGCTTTaGAATCCCGGAAACTTCACA +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGGHFRL*NPGNFT
Trigger: TGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCC...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACCAGGACAGCTGGCCTTaGGCGTTGGAAGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: HGFPEPACRSSQTQTHGHQDSWP*ALEAVQ
Trigger: CTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTG...GTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTTGCAGCACAAAATCCTaGCCCTCAATAACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPCSTKS*PSITAQ
Trigger: CTGCGCTGTTATTGAGGGCCAGGATTTTGTGCTGCA...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGAGCGAGCGTACTGGATaGGCTGCCCATTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGSERTG*AAHSAA
Trigger: GGCTGCTGAATGGGCAGCCCATCCAGTACGCTCGCT...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTCCGGGATTTCATCTCTaGGGCCTTGGTGTTCTCACT +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARPGFHL*GLGVLT
Trigger: AGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGG...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCACTGCTGGGGTCTTTATaGTTCCCAGAAAATAAAGAT +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPLLGSL*FPENKD
Trigger: ATCTTTATTTTCTGGGAACCATAAAGACCCCAGCAG...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCACAATTTAGGACTAGTTaGAAAGCCAGTAAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPQFRTS*KASKLQ
Trigger: CTGAAGCTTACTGGCTTTCCAACTAGTCCTAAATTG...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
3UTR CAA 72 bp CACTCCGCCTGGCCAGCGTCATTCTTGGCTACACACTaGTATAAGCCTCTGTCCTCAGGCAGTGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: HSAWPASFLATH*YKPLSSGSAFS
Trigger: CGAGAAGGCACTGCCTGAGGACAGAGGCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 72 bp ACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTaGGCTACACACTTGTATAAGCCTCTGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TWQEHSAWPASF*ATHLYKPLSSG
Trigger: GCCTGAGGACAGAGGCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGCTCCTGAAGTTGCTCTaGACTGCAGCAGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGLLKLL*TAAEAA
Trigger: GGCTGCCTCTGCTGCAGTTCAGAGCAACTTCAGGAG...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GACACTGGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGTTGGAAACAACAGGCTaGCCAAGCTGCTTCGCAAAA +
Preference number: 4 (lower is better)
Translates to: DTGEGGGHLHHGKPFHLELETTG*PSCFAK
Trigger: TTTTGCGAAGCAGCTTGGTCAGCCTGTTGTTTCCAA...CTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCCAGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTCCACGTCATCTTGGTTaGCTCCATGGATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPPRHLG*LHGFPE
Trigger: TTCTGGAAATCCATGGAGTCAACCAAGATGACGTGG...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCCAGCTTCGACTCCTTTaGGATTACATTGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGQLRLL*DYIGHL
Trigger: GAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCTG...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGTTGCGGCCTGCAGGGTaGTGGAGCTGGAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGLRPAG*WSWKSS
Trigger: AGAAGACTTCCAGCTCCATCACCCTGCAGGCCGCAA...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGTCTTTTCATGGACGGTaGCCCAGGCGCTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGSFHGR*PRRCRT
Trigger: TGTCCTGCAGCGCCTGGGTCACCGTCCATGAAAAGA...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAGGCTGGGTGCCATCGTaGGGCTCTTGTACCGTGAGC +
Preference number: 4 (lower is better)
Translates to: SNLGNAESLWPSMGILLLGWVPS*GSCTVS
Trigger: GCTCACGGTACAAGAGCCTCACGATGGCACCCAGCC...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGCCTCAGGGAACTGGATaGTCTGAGGGGGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGPQGTG*SEGALL
Trigger: CAGCAATGCCCCCTCAGATCATCCAGTTCCCTGAGG...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTACTGCCCCCATCATATaGGGAGCCATACCAGGACAG +
Preference number: 4 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVATAPII*GAIPGQ
Trigger: CTGTCCTGGTATGGCTCCTCATATGATGGGGGCAGT...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACGCAGGTCCTGGACGTTaGAAGAGGTGCTGCGGCATG +
Preference number: 4 (lower is better)
Translates to: NRPICPSLTTTRPSLVANAGPGR*KRCCGM
Trigger: CATGCCGCAGCACCTCTTTCAACGTCCAGGACCTGC...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGAAGTCCCAGGTGGCTaGGGTAACGTTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALEVPGG*GNVGQG
Trigger: ACCTTGGCCAACGTTACCTCAGCCACCTGGGACTTC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360304.8
CDS-3UTR GCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGGTTGCCCGTTTCTGTaGCATGTCACCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALGCPFL*HVTWGS
Trigger: AGAGCCCCAGGTGACATGGCACAGAAACGGGCAACC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCCCCCGTACGGAGCACTaGAGCACAAAATCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFPRTEH*STKSWP
Trigger: GGGCCAGGATTTTGTGCTGCAGTGCTCCGTACGGGG...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGAGGTTGACCTGGGCCTaGCTGCTGCCCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLRLTWA*LLPSLF
Trigger: GAACAAGCTGGGCAGCAGGCAGGCCCAGGTCAACCT...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGTCCGGGCTTTCAGCAGGCAACTCCCACGTCATCTTaGTTGACTCCATGGATTTCC +
Preference number: 4 (lower is better)
Translates to: GSSAAVCPTVPGPGFQQATPTSS*LTPWIS
Trigger: GGAAATCCATGGAGTCAACCAAGATGACGTGGGAGT...TGCCTGCTGAAAGCCCGGACCAGGGACAGTGGGACATACAGCTGCACTGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGTGTCCAAACCTTGGATaGAAAGTTCAGCTGACATCG +
Preference number: 4 (lower is better)
Translates to: CSGTFPLSQVTCGWGRPVCPNLG*KVQLTS
Trigger: CGATGTCAGCTGAACTTTCCATCCAAGGTTTGGACA...CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCATGGACGGGGAGGAGCTaGCCTCTTCCTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPWTGRS*PLPLFS
Trigger: GGAGAAGAGAGGAAGAGGCCAGCTCCTCCCCGTCCA...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGCTGGCCTTGGGCGTTaGAAGCAGTGCAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALAGLGR*KQCSCM
Trigger: CATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GTGGCTGAGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGCAGCTACAGGACAGCTaGCCTTGGGCGTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: VAEVTLAKVSLSLSPMKGQLQDS*PWALEA
Trigger: TGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAGCTG...CCCCTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAGTGATCCGGGGCACTaGGGTCCCCCGTACGGAGCA +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGSDPGH*GPPYGA
Trigger: TGCTCCGTACGGGGGACCCCAGTGCCCCGGATCACT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCAGCGAGCGTACTGGATaGGCTGCCCATTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFSERTG*AAHSAA
Trigger: GGCTGCTGAATGGGCAGCCCATCCAGTACGCTCGCT...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGCAGTGCCTTCTCGATaGAGACGGAGCAGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALAVPSR*RRSRVS
Trigger: GCTCACTCTGCTCCGTCTCCATCGAGAAGGCACTGC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGCAGGAGCACTCCGCCTaGCCAGCGTCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLQEHSA*PASFLA
Trigger: AGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTG...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGCCTGCGCGTACCTTCTaGTCCTCAGGGAACTGGATG +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGPARTF*SSGNWM
Trigger: CATCCAGTTCCCTGAGGACCAGAAGGTACGCGCAGG...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACACCTGCGCGTACCTTCTaGTCCTCAGGGAACTGGATG +
Preference number: 4 (lower is better)
Translates to: PRLLTALQVYLASSSPQTPARTF*SSGNWM
Trigger: CATCCAGTTCCCTGAGGACCAGAAGGTACGCGCAGG...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GACACTGGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGATGTGCTCGCTTTCCTaGATCTGCTTTCGGAACTTC +
Preference number: 4 (lower is better)
Translates to: DTGEGGGHLHHGKPFHLEMCSLS*ICFRNF
Trigger: GAAGTTCCGAAAGCAGATCCAGGAAAGCGAGCACAT...CTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCCAGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCTACACACTTGTATAAGCCTTGCTCCACATGTCTGTaGCGTAGCCGATGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: QEHSAWPASFLATHLYKPCSTCL*RSRWAH
Trigger: ATGAGCCCATCGGCTACGCCACAGACATGTGGAGCA...AGGCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTTCTTCATCCGGTCCTTaGAGAGTTTCTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARSSSGP*RVSWPP
Trigger: TGGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGA...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTACAGGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCTTCATCCGGTCCTTaGAGAGTTTCTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LQDSWPWALEAVQLYVPLSSSGP*RVSWPP
Trigger: TGGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGA...CAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAAGATTCCAAAGTACATaGAGTTCTCCAGCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPRFQST*SSPALY
Trigger: ATAAAGAGCTGGAGAACTCCATGTACTTTGGAATCT...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAAGATGTATTAAACTCTaGCTATCTTGGAGGAGATTC +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPRCIKL*LSWRRF
Trigger: GAATCTCCTCCAAGATAGCCAGAGTTTAATACATCT...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
3UTR CAA 72 bp ATGTACTCCACTCCCTCCGAGATCTGCCGCATGTACTaGATGCACTCACGCTCCGTCAGCTCAAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: MYSTPSEICRMY*MHSRSVSSKSS
Trigger: CGAGGACTTTGAGCTGACGGAGCGTGAGTGCATCAAGTACATGCGGCAGATCTCGGAGGGAGTGGAGTACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 72 bp GCCTCGTCGTCGAAGTCCCAGGTGGCTGAGGTAACGTaGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAG +
Preference number: 4 (lower is better)
Translates to: ASSSKSQVAEVT*AKVSLSLSPMK
Trigger: CTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCACCTGGGACTTCGACGACGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 72 bp GCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTaGCAGGTGTACTTGGCATCGTCATCCCCGCAAACA +
Preference number: 4 (lower is better)
Translates to: AVQVASPRLLTA*QVYLASSSPQT
Trigger: TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACCTCCTGAAGTTGCTCTaGACTGCAGCAGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NRPICPSLTTTRPSLVANLLKLL*TAAEAA
Trigger: GGCTGCCTCTGCTGCAGTTCAGAGCAACTTCAGGAG...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CTACAGGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTTGAGGGATCCACACTaGGGGAGGTTTTGGAAATGT +
Preference number: 4 (lower is better)
Translates to: LQDSWPWALEAVQLYVPLLRDPH*GRFWKC
Trigger: ACATTTCCAAAACCTCCCTCAGTGTGGATCCCTCAA...CAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCTACACACTTGTATAAGCCTCATGGAGTCAACTCTTaGGGGATCCACACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QEHSAWPASFLATHLYKPHGVNS*GIHTEG
Trigger: TCCCTCAGTGTGGATCCCTCAAGAGTTGACTCCATG...AGGCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCTCTTTTCATGGACGGTaGCCCAGGCGCTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFSFHGR*PRRCRT
Trigger: TGTCCTGCAGCGCCTGGGTCACCGTCCATGAAAAGA...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACGCCAAACAGCTCCACTaGCTCTCCTGCGCGTACCTT +
Preference number: 4 (lower is better)
Translates to: NRPICPSLTTTRPSLVANAKQLH*LSCAYL
Trigger: AAGGTACGCGCAGGAGAGTCAGTGGAGCTGTTTGGC...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACGTACAGGTGATGGGCTaGGTGCCTGTCACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: HGFPEPACRSSQTQTHGHVQVMG*VPVTLP
Trigger: TGGCAAAGTGACAGGCACTCAGCCCATCACCTGTAC...GTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACACCTGCCACTGAGCCCTaGGATCATTGCCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: PRLLTALQVYLASSSPQTPATEP*DHCHRG
Trigger: TCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGG...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGCCATCGTTTCCACAATaGGCTCTGCTGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGPSFPQ*ALLCRW
Trigger: CCACCTGCACAGCAGAGCTCATTGTGGAAACGATGG...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTTGGATTTCCAGAACCTaGATGCCGTTCTTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARWISRT*MPFFSD
Trigger: GTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCA...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp AGAGCTCTTGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTGGCTGGATTTCCAGAACCTaGATGCCGTTCTTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RALGPPGFHLWGLGVLTGWISRT*MPFFSD
Trigger: GTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCA...GCCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGGGCTGGAGCAGTTCTTaGTTTTGGCTGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGGWSSS*FWLQPP
Trigger: TGGAGGCTGCAGCCAAAAGCAAGAACTGCTCCAGCC...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp CATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACGGCTGGAGCAGTTCTTaGTTTTGGCTGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HGFPEPACRSSQTQTHGHGWSSS*FWLQPP
Trigger: TGGAGGCTGCAGCCAAAAGCAAGAACTGCTCCAGCC...GTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGGACCCCCAGGCCTGGTaGTCTTGGTTCCGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGDPQAW*SWFRLN
Trigger: GTTCAGCCGGAACCAAGAGCACCAGGCCTGGGGGTC...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGGTCCAGGTGCACGATaGCCTGCTTGTGGATGTACT +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALGPGAR*PACGCT
Trigger: AGTACATCCACAAGCAGGGCATCGTGCACCTGGACC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCCTGCCATTTCCTTCTTaGCATGTACTTCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGLPFPS*HVLLHP
Trigger: CGGATGAAGAAGTACATGGCAAGAAGGAAATGGCAG...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGCCTGAAGCTCTCGGCTaGGAAGCTCCTGAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGPEALG*EAPEVA
Trigger: AGCAACTTCAGGAGCTTCCCAGCCGAGAGCTTCAGG...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGGCACTCGGCTGCAGTaGAACATTTCCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALGTRLQ*NISLEP
Trigger: TGGCTCAAGGGAAATGTTCCACTGCAGCCGAGTGCC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACTGCATGACTCCAGCTTaGACTCCCTTGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NRPICPSLTTTRPSLVANCMTPA*TPLGAE
Trigger: CTCAGCCCCCAAGGGAGTCCAAGCTGGAGTCATGCA...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTTTGCTCACAACATCTTaGCTCCCCAGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVLLTTS*LPRPGC
Trigger: GCAGCCTGGCCTGGGGAGCCAAGATGTTGTGAGCAA...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCGCTTGCTCTCAAATTTaGGGAATGCTGAATCCCTCT +
Preference number: 4 (lower is better)
Translates to: IIHGDLAGALRLASVILGACSQI*GMLNPS
Trigger: AGAGGGATTCAGCATTCCCCAAATTTGAGAGCAAGC...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GCCTTCCAGGAACCAGGCCACTTCAGGCTTTGGAATCCCGGAAACTTCACATCTGCAAGCCTTTCCACTTaGAGGGTCCAGCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: AFQEPGHFRLWNPGNFTSASLST*RVQLQD
Trigger: GTCCTGTAGCTGGACCCTCCAAGTGGAAAGGCTTGC...AGATGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCTGGTTCCTGGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCAGTGCCTTCTCGATaGAGACGGAGCAGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVAVPSR*RRSRVS
Trigger: GCTCACTCTGCTCCGTCTCCATCGAGAAGGCACTGC...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACTCATCTCTGGGGCCTTaGTGTTCTCACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HGFPEPACRSSQTQTHGHSSLGP*CSHWLE
Trigger: CTCCAGCCAGTGAGAACACCAAGGCCCCAGAGATGA...GTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCAGCCGCAGTGCTCCTaGCGCGCGGCCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLQPQCS*RAARMV
Trigger: CACCATCCTGGCCGCGCGCCAGGAGCACTGCGGCTG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGACAAGGTGTGCCAGCTaGGGGGTCTGGCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLTRCAS*GVWLIH
Trigger: GTGGATAAGCCAGACCCCCCAGCTGGCACACCTTGT...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCTACACACTTGTATAAGCCTGTGAGTTCAGACTCCTaGCTTGGCTCACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: QEHSAWPASFLATHLYKPVSSDS*LGSLVP
Trigger: TGGAACCAGTGAGCCAAGCCAGGAGTCTGAACTCAC...AGGCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTTGGACCAGCTTAGGGTaGTGGAGGCAGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVAWTSLG*WRQFMM
Trigger: CATCATGAACTGCCTCCACCACCCTAAGCTGGTCCA...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAAATATATTTAAAGGTTaGGGGCAAGGCATGATTGAT +
Preference number: 4 (lower is better)
Translates to: GEREASHPQEPSGLSCGPNIFKG*GQGMID
Trigger: ATCAATCATGCCTTGCCCCCAACCTTTAAATATATT...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGGTCCCTGGTTCCAGCTaGGTAGTGCGAGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGVPGSS*VVRGAA
Trigger: TGCAGCCCCTCGCACTACCCAGCTGGAACCAGGGAC...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000578202.1
3UTR CAA 72 bp AGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTaGCCCGTCATTATGGAGAGGCTTGTACCAGCACAT +
Preference number: 4 (lower is better)
Translates to: RPRWLQQPPSHV*PVIMERLVPAH
Trigger: ATGTGCTGGTACAAGCCTCTCCATAATGACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR CAA 72 bp TCCCCTCCTGACACGATCTCCAGGACCATGACGATGTaGGCCTTTTCTTCAAAGGCATCCACACACTGGACC +
Preference number: 4 (lower is better)
Translates to: SPPDTISRTMTM*AFSSKASTHWT
Trigger: GGTCCAGTGTGTGGATGCCTTTGAAGAAAAGGCCAACATCGTCATGGTCCTGGAGATCGTGTCAGGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 72 bp TGGAAGTGGCGGGACTCCCTGATTGACTGGTCATCTTaGAACCAGACAACCTCGGGGTCTGGGTATCCTTCA +
Preference number: 4 (lower is better)
Translates to: WKWRDSLIDWSS*NQTTSGSGYPS
Trigger: TGAAGGATACCCAGACCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAATCAGGGAGTCCCGCCACTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 72 bp ATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTaGACAGCCTTGCAGGTGTACTTGGCATCGTCATCC +
Preference number: 4 (lower is better)
Translates to: MSSAVQVASPRL*TALQVYLASSS
Trigger: GGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGCGGCCCCCGCTGGTaGTGGGTTGCCCGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGISGPRW*WVARFC
Trigger: ACAGAAACGGGCAACCCATCACCAGCGGGGGCCGCT...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGAGCTGGAAGTCTTCTaGAGGACCGGGGTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDELEVF*RTGVCG
Trigger: CCCGCAGACCCCGGTCCTTCAGAAGACTTCCAGCTC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTACCTCAGGGAACTGGATaGTCTGAGGGGGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: SNLGNAESLWPSMGILLLPQGTG*SEGALL
Trigger: CAGCAATGCCCCCTCAGATCATCCAGTTCCCTGAGG...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTCCACGTCTTGTTGGCTaGGTCCCAGATCTCGATGCT +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVPRLVG*VPDLDA
Trigger: AGCATCGAGATCTGGGACTCAGCCAACAAGACGTGG...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTCCACGTCTTGTTGGCTaGGTCCCAGATCTCGATGCT +
Preference number: 4 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLPRLVG*VPDLDA
Trigger: AGCATCGAGATCTGGGACTCAGCCAACAAGACGTGG...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTCTTCTCATCATCATCTaGCACCTCCACTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARLLIII*HLHFIL
Trigger: AAGGATGAAGTGGAGGTGTCAGATGATGATGAGAAG...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTACAAAGTCCTCGTCAATaGTGCGCTCAAACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALQSPRQ*CAQTAP
Trigger: GGGAGCTGTTTGAGCGCATCATTGACGAGGACTTTG...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTTCTGCCGCATGTACTTaGTGCACTCACGCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVSAACT*CTHAPS
Trigger: TGACGGAGCGTGAGTGCATCAAGTACATGCGGCAGA...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACACTAGGATGTAGCAGATaGCCCCGATGCTCCACATGT +
Preference number: 4 (lower is better)
Translates to: PRLLTALQVYLASSSPQTLGCSR*PRCSTC
Trigger: ACATGTGGAGCATCGGGGTCATCTGCTACATCCTAG...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACACTAGTTTTTCTGCATTaGGCGGGCTGGTTGGTGACC +
Preference number: 4 (lower is better)
Translates to: PRLLTALQVYLASSSPQTLVFLH*AGWLVT
Trigger: GGTCACCAACCAGCCCGCTCAATGCAGAAAAACTAG...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTAGCCAGAGTCATCCATaGGCAGGGACCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVSQSHP*AGTCLQ
Trigger: CTGAAGACAGGTCCCTGCTCATGGATGACTCTGGCT...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGGGAACAAGGACCTCCTaGGAGCCGAGGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGGTRTS*EPRFCQ
Trigger: CTGGCAGAACCTCGGCTCTCAGGAGGTCCTTGTTCC...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000578202.1
CDS-3UTR GCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGGTCTCCTCACGGGGGTaGCTTCCAGGAACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSVSSRG*LPGTRP
Trigger: TGGCCTGGTTCCTGGAAGGCACCCCCGTGAGGAGAC...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAACTCCCTCCGAGATCTaGCGCATGTACTTGATGCAC +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALTPSEI*RMYLMH
Trigger: GTGCATCAAGTACATGCGGCAGATCTCGGAGGGAGT...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGGTTTGTTGTGGCAACTaGGCCAGTGGGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGVCCGN*ASGTGK
Trigger: CTTTCCTGTCCCACTGGCCCAGTTGCCACAACAAAC...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGGCACTCGGCTGCAGTaGAACATTTCCCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVGTRLQ*NISLEP
Trigger: TGGCTCAAGGGAAATGTTCCACTGCAGCCGAGTGCC...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTACAGGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCTTGGTTGACTCCATaGATTTCCAGAACCTGCATG +
Preference number: 4 (lower is better)
Translates to: LQDSWPWALEAVQLYVPLSWLTP*ISRTCM
Trigger: CATGCAGGTTCTGGAAATCCATGGAGTCAACCAAGA...CAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACAAATGCTGAATCCCTCTaGCCCTCCATGGGGATTCTC +
Preference number: 4 (lower is better)
Translates to: PRLLTALQVYLASSSPQTNAESL*PSMGIL
Trigger: GAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATT...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACACCGGGATTTCATCTCTaGGGCCTTGGTGTTCTCACT +
Preference number: 4 (lower is better)
Translates to: PRLLTALQVYLASSSPQTPGFHL*GLGVLT
Trigger: AGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGG...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTCCTTCGGAGGTGTCTTaGGGGCAGGTTTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVAPSEVS*GQVSFS
Trigger: TGAAAAAGAAACCTGCCCCCAAGACACCTCCGAAGG...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATACAGTGAGGTTGACCTaGGCCTGCCTGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDTVRLT*ACLLPS
Trigger: GCTGGGCAGCAGGCAGGCCCAGGTCAACCTCACTGT...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTTCAGGCAGCAGGTCCTaGACGTTGAAAGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVSGSRS*TLKEVL
Trigger: CAGCACCTCTTTCAACGTCCAGGACCTGCTGCCTGA...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACTCAGGCAGCAGGTCCTaGACGTTGAAAGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NRPICPSLTTTRPSLVANSGSRS*TLKEVL
Trigger: CAGCACCTCTTTCAACGTCCAGGACCTGCTGCCTGA...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTTTCAGACTCCTGGCTTaGCTCACTGGTTCCATACAC +
Preference number: 4 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVAFRLLA*LTGSIH
Trigger: GTGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGAA...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACACGATGCCCTGCTTGTaGATGTACTCCACTCCCTCC +
Preference number: 4 (lower is better)
Translates to: NRPICPSLTTTRPSLVANTMPCL*MYSTPS
Trigger: GGAGGGAGTGGAGTACATCCACAAGCAGGGCATCGT...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACAAGGACAGTCTTCCAATaGCTCTCACAGCATTGCCCG +
Preference number: 4 (lower is better)
Translates to: PRLLTALQVYLASSSPQTRTVFQ*LSQHCP
Trigger: CGGGCAATGCTGTGAGAGCCATTGGAAGACTGTCCT...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCTACACACTTGTATAAGCCTGACAACCTCGGGGTCTaGGTATCCTTCAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: QEHSAWPASFLATHLYKPDNLGV*VSFNLA
Trigger: TGCAAGATTGAAGGATACCCAGACCCCGAGGTTGTC...AGGCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTACCTTGCAGGTGTACTTaGCATCGTCATCCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALPCRCT*HRHPRK
Trigger: TTTGCGGGGATGACGATGCCAAGTACACCTGCAAGG...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
3UTR CAA 72 bp AACTTATATTCGTGGTCAGGCAGCAGGTCCTGGACGTaGAAAGAGGTGCTGCGGCATGTGGCTAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: NLYSWSGSRSWT*KEVLRHVASSF
Trigger: GAAGGAACTAGCCACATGCCGCAGCACCTCTTTCAACGTCCAGGACCTGCTGCCTGACCACGAATATAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGCGGTGGCTCCTTCTTTaGTGCAGAGGTTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSRWLLL*CRGSEG
Trigger: CCCCTCGGAACCTCTGCATCAAAGAAGGAGCCACCG...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGCGCGGCCAGGATGGTaGGCTTGCTGCCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLARPGW*ACCHSR
Trigger: GCGAGAATGGCAGCAAGCTCACCATCCTGGCCGCGC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTATTGACTGGTCATCTTTaGACCAGACAACCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALLTGHL*TRQPRG
Trigger: ACCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAA...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGCCGCTGGTGATGGGTTaGCCGTTTCTGTGCCATGTC +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGPLVMG*PFLCHV
Trigger: GACATGGCACAGAAACGGGCAACCCATCACCAGCGG...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTACATAAACCTCAATGCTaGCTTCCTGTCTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALHKPQC*LPVSSR
Trigger: CCGTGAGGAGACAGGAAGGCAGCATTGAGGTTTATG...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GCCTTCCAGGAACCAGGCCACTTCAGGCTTTGGAATCCCGGAAACTTCACATCTCATAAACCTCAATGCTaGCTTCCTGTCTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: AFQEPGHFRLWNPGNFTSHKPQC*LPVSSR
Trigger: CCGTGAGGAGACAGGAAGGCAGCATTGAGGTTTATG...AGATGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCTGGTTCCTGGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTAGGACTGTACAGCACTaGCCCCATCATATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVRTVQH*PHHMRS
Trigger: GCTCCTCATATGATGGGGGCAGTGCTGTACAGTCCT...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTAGGACTGTACAGCACTaGCCCCATCATATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLRTVQH*PHHMRS
Trigger: GCTCCTCATATGATGGGGGCAGTGCTGTACAGTCCT...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGCCACAAATTCTGGGGTaGCAAAGAGGACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGPQILG*QRGPSE
Trigger: CTCTGAAGGTCCTCTTTGGCACCCCAGAATTTGTGG...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCGGAGATCTCATCGAATaGCTCGTCGTCGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFGDLIE*LVVEVP
Trigger: TGGGACTTCGACGACGAGGCATTCGATGAGATCTCC...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GACACTGGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGTCAGCTGGCCCGAATTaGTTTCTGTTAATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: DTGEGGGHLHHGKPFHLESAGPN*FLLILK
Trigger: CTTCAAAATTAACAGAAACCAATTCGGGCCAGCTGA...CTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCCAGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGTGGCAACTGGGCCAGTaGGACAGGAAAGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSWQLGQ*DRKGVL
Trigger: CAGGACGCCTTTCCTGTCCCACTGGCCCAGTTGCCA...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAAGCAGTTCTTGCTTTTaGCTGCAGCCTCCAGACTGT +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALSSSCF*LQPPDC
Trigger: ACAGTCTGGAGGCTGCAGCCAAAAGCAAGAACTGCT...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGTGCATGACTCCAGCTTaGACTCCCTTGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGCMTPA*TPLGAE
Trigger: CTCAGCCCCCAAGGGAGTCCAAGCTGGAGTCATGCA...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGCAGGCCTGGTGCTCTTaGTTCCGGCTGAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGQAWCS*FRLNSC
Trigger: GCAAGAGTTCAGCCGGAACCAAGAGCACCAGGCCTG...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATTGGACGGGGAGGAGCTaGCCTCTTCCTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDWTGRS*PLPLFS
Trigger: GGAGAAGAGAGGAAGAGGCCAGCTCCTCCCCGTCCA...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTAATGCTGAATCCCTCTaGCCCTCCATGGGGATTCTC +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVNAESL*PSMGIL
Trigger: GAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATT...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCAGAGGTCCTCGCAGCTaGCAGGCTCCCTCCCCCGTG +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCRGPRS*QAPSPV
Trigger: CACGGGGGAGGGAGCCTGCCAGCTGCGAGGACCTCT...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTACCTTCGGAGGTGTCTTaGGGGCAGGTTTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALPSEVS*GQVSFS
Trigger: TGAAAAAGAAACCTGCCCCCAAGACACCTCCGAAGG...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTCGGAACTTATATTCGTaGTCAGGCAGCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVRNLYS*SGSRSW
Trigger: CCAGGACCTGCTGCCTGACCACGAATATAAGTTCCG...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCACGGAACTTATATTCGTaGTCAGGCAGCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPRNLYS*SGSRSW
Trigger: CCAGGACCTGCTGCCTGACCACGAATATAAGTTCCG...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTCCTTGCAGGTGTACTTaGCATCGTCATCCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLPCRCT*HRHPRK
Trigger: TTTGCGGGGATGACGATGCCAAGTACACCTGCAAGG...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTTCAGAAATGAATTGCTaGAGTACTGGGAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: GWLETQMAAAATISCVARSEMNC*STGRKP
Trigger: GGGTTTTCTCCCAGTACTCCAGCAATTCATTTCTGA...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAGGTGGTACCAGCCATaGCAGCCCTCCCTACGTAGT +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGRWYQP*QPSLRS
Trigger: ACTACGTAGGGAGGGCTGCCATGGCTGGTACCACCT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGACCCAGCTCTTCCCATaGGAGGTTACCCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGTQLFP*EVTLPS
Trigger: TGAGGGCAGGGTAACCTCCCATGGGAAGAGCTGGGT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAACAGGAAAGGCGTCCTaGAGCTCTCGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGITGKAS*SSRLGS
Trigger: GCTTCCCAGCCGAGAGCTTCAGGACGCCTTTCCTGT...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGTCCTCATGGACAGCATaGATCACAAGGCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGSSWTA*ITRLKV
Trigger: GACTTTCAGCCTTGTGATTCATGCTGTCCATGAGGA...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCACAGTTTGATTTTCCTTaGCCTCCTGGCTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPQFDFP*PPGFGA
Trigger: AGCCCCAAAGCCAGGAGGTCAAGGAAAATCAAACTG...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGCCAAACAGCTCCACTaGCTCTCCTGCGCGTACCTT +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDAKQLH*LSCAYL
Trigger: AAGGTACGCGCAGGAGAGTCAGTGGAGCTGTTTGGC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTCGATCTCCAGGACCATaGCGATGTTGGCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVRSPGP*RCWPFL
Trigger: AAGAAAAGGCCAACATCGTCATGGTCCTGGAGATCG...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGTTTCCAGAACCTGCATaGCGTTCTTCTCAGACACAG +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGFPEPA*RSSQTQ
Trigger: CTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAA...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACATTTCCAGAACCTGCATaGCGTTCTTCTCAGACACAG +
Preference number: 4 (lower is better)
Translates to: PRLLTALQVYLASSSPQTFPEPA*RSSQTQ
Trigger: CTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAA...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAGTTCTTGCTTTTGGCTaGAGCCTCCAGACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SNLGNAESLWPSMGILLLVLAFG*SLQTVQ
Trigger: CTGGACAGTCTGGAGGCTGCAGCCAAAAGCAAGAAC...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATTTCCGGCTGAACTCTTaGGGCCTGCAGGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDFRLNS*GLQGDG
Trigger: TCCATCACCCTGCAGGCCGCAAGAGTTCAGCCGGAA...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTCCTGGCTTTGGGGCTTaGTCTCAAATTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLPGFGA*SQIWGM
Trigger: CATTCCCCAAATTTGAGAGCAAGCCCCAAAGCCAGG...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTCATAAACCTCAATGCTaGCTTCCTGTCTCCTCACGG +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVHKPQC*LPVSSR
Trigger: CCGTGAGGAGACAGGAAGGCAGCATTGAGGTTTATG...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACGAGTGCCTGTCACTTTaGCAAACAGCTCCACTGACT +
Preference number: 4 (lower is better)
Translates to: NRPICPSLTTTRPSLVANECLSL*QTAPLT
Trigger: AGTCAGTGGAGCTGTTTGGCAAAGTGACAGGCACTC...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGAGTCCCAGATCTCGATaGTGTAGGACTGTACAGCAC +
Preference number: 4 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLSPRSR*CRTVQH
Trigger: GTGCTGTACAGTCCTACAGCATCGAGATCTGGGACT...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCATGGCTCTCACAGCATTaGCCGTTTTCTGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPWLSQH*PFSAIS
Trigger: GGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCA...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGATGCTTTGCTCACTTaGCCACTGCTAACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALDALLT*PLLTSL
Trigger: TAAGGAGGTTAGCAGTGGGCAAGTGAGCAAAGCATC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTACTCTGTTGTTTGTTGTaGCAACTGGGCCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SNLGNAESLWPSMGILLLLCCLL*QLGQWD
Trigger: GTCCCACTGGCCCAGTTGCCACAACAAACAACAGAG...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATACAGGACAGCTGGCCTTaGGCGTTGGAAGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIQDSWP*ALEAVQ
Trigger: CTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTG...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGCCCGTGGAAGGGCTCTaGCAGAGCTGTTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSPVEGL*QSCSVA
Trigger: TGCTACAGAACAGCTCTGCCAGAGCCCTTCCACGGG...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTCAGAGTGAGCCTTCCTaGGAGAGGATGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLQSEPS*ERMMNL
Trigger: CAAGTTCATCATCCTCTCCCAGGAAGGCTCACTCTG...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATACAGGAGCACTCCGCCTaGCCAGCGTCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIQEHSA*PASFLA
Trigger: AGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTG...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAATGTGCTCGCTTTCCTaGATCTGCTTTCGGAACTTC +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALMCSLS*ICFRNF
Trigger: GAAGTTCCGAAAGCAGATCCAGGAAAGCGAGCACAT...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCAGGAGCCACAAATTCTaGGGTGCCAAAGAGGACCTT +
Preference number: 4 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFRSHKF*GAKEDL
Trigger: AAGGTCCTCTTTGGCACCCCAGAATTTGTGGCTCCT...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCAAGCCCAGCCGGAATaGGTCCGGCTCCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMQAQPE*VRLPPL
Trigger: CAGAGGTGGGAGCCGGACCCATTCCGGCTGGGCTTG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGCAGGCTCAGGCCACGTaGCAACCTTTCATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGQAQAT*QPFMLF
Trigger: GAAGAGCATGAAAGGTTGCCACGTGGCCTGAGCCTG...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAGGTTTTGGAAATGTGTaGCGAGGCAACCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SNLGNAESLWPSMGILLLGFGNV*RGNQLH
Trigger: GTGAAGCTGGTTGCCTCGTCACACATTTCCAAAACC...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATCCATCTGTCCTTCTTTaGCCACAACTCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDPSVLL*PQLGPA
Trigger: AGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGG...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTCCACGTCATCTTGGTTaGCTCCATGGATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVPRHLG*LHGFPE
Trigger: TTCTGGAAATCCATGGAGTCAACCAAGATGACGTGG...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGGGCGAGTCCTTGCATaGCTCCAGCTTGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLGRVLA*LQLGLP
Trigger: AGGGAGTCCAAGCTGGAGTCATGCAAGGACTCGCCC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGGCTGGGTGCCATCGTaGGGCTCTTGTACCGTGAGC +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSGWVPS*GSCTVS
Trigger: GCTCACGGTACAAGAGCCTCACGATGGCACCCAGCC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGAGCATCATCCACGGTaGCTTGGCAGGAGCACTCCG +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLEHHPR*LGRSTP
Trigger: CGGAGTGCTCCTGCCAAGTCACCGTGGATGATGCTC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGGCGGGACTCCCTGATTaGCTGGTCATCTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGAGLPD*LVIFEP
Trigger: TGGTTCAAAGATGACCAGTCAATCAGGGAGTCCCGC...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATCCATCGTTTCCACAATaGGCTCTGCTGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDPSFPQ*ALLCRW
Trigger: CCACCTGCACAGCAGAGCTCATTGTGGAAACGATGG...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR GCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGACACGGGCACTCGGCTaGAGTGGAACATTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSTRALG*SGTFPL
Trigger: CAAGGGAAATGTTCCACTGCAGCCGAGTGCCCGTGT...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGGCTGGAGCAGTTCTTaGTTTTGGCTGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDGWSSS*FWLQPP
Trigger: TGGAGGCTGCAGCCAAAAGCAAGAACTGCTCCAGCC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGGTCTCCTCACGGGGGTaGCTTCCAGGAACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMVSSRG*LPGTRP
Trigger: TGGCCTGGTTCCTGGAAGGCACCCCCGTGAGGAGAC...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCTTCTCCACCTTCATGTaGTCGCTTTCCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: SLPMALTALPVFCHFLLAFSTFM*SLSWIC
Trigger: GCAGATCCAGGAAAGCGAGCACATGAAGGTGGAGAA...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCCTGGGCCTGCCTGCTaGCCAGCTTGTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMPGPAC*PACSPP
Trigger: TGGTGGAGAACAAGCTGGGCAGCAGGCAGGCCCAGG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACCTGGGCCTGCCTGCTaGCCAGCTTGTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSPGPAC*PACSPP
Trigger: TGGTGGAGAACAAGCTGGGCAGCAGGCAGGCCCAGG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGAGGTTGACCTGGGCCTaGCTGCTGCCCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLRLTWA*LLPSLF
Trigger: GAACAAGCTGGGCAGCAGGCAGGCCCAGGTCAACCT...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGTTCCACAATGAGCTCTaGTGTGCAGGTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGFHNEL*CAGGFS
Trigger: GGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR GCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAGAGACCCAGATGGCTaGAGCAGCCACCATCTCATG +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDRDPDG*SSHHLM
Trigger: CATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCT...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCTGCGGAGAATGCCTCTaGAGGCTCAGGCCACGTGGC +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSCGECL*RLRPRG
Trigger: GCCACGTGGCCTGAGCCTGCAGAGGCATTCTCCGCA...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGTACTGTCATGCCTCCTaGCATCCTTGCTGCAGACTG +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGYCHAS*HPCCRL
Trigger: CAGTCTGCAGCAAGGATGGCAGGAGGCATGACAGTA...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGAGCGAACCCAACCTTaGTCTGCTCAGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDERTQP*SAQHCQ
Trigger: CTGACAGTGCTGAGCAGAGCAAGGTTGGGTTCGCTC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCACAAATGACCTATTaGCACTGTCCAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVASQMTY*HCPNLG
Trigger: TCCAAGGTTTGGACAGTGCCAATAGGTCATTTGTGA...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCAGCAGTTCTTGCTTTTaGCTGCAGCCTCCAGACTGT +
Preference number: 4 (lower is better)
Translates to: SLPMALTALPVFCHFLLASSSCF*LQPPDC
Trigger: ACAGTCTGGAGGCTGCAGCCAAAAGCAAGAACTGCT...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATCACCTCTCTGGGGGCTaGAGCAGTTCTTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDHLSGG*SSSCFW
Trigger: CCAAAAGCAAGAACTGCTCCAGCCCCCAGAGAGGTG...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCGGGGAGCCACCTCTCTaGGGGCTGGAGCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCGEPPL*GLEQFL
Trigger: CAAGAACTGCTCCAGCCCCCAGAGAGGTGGCTCCCC...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATATTGCTCACAACATCTTaGCTCCCCAGGCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGILLTTS*LPRPGC
Trigger: GCAGCCTGGCCTGGGGAGCCAAGATGTTGTGAGCAA...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGGCTTGCTCTCAAATTTaGGGAATGCTGAATCCCTCT +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGACSQI*GMLNPS
Trigger: AGAGGGATTCAGCATTCCCCAAATTTGAGAGCAAGC...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCAGGACAGCTGGCCTTaGGCGTTGGAAGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLQDSWP*ALEAVQ
Trigger: CTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATTCATCTCTGGGGCCTTaGTGTTCTCACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDSSLGP*CSHWLE
Trigger: CTCCAGCCAGTGAGAACACCAAGGCCCCAGAGATGA...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACAGCCGCAGTGCTCCTaGCGCGCGGCCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEQPQCS*RAARMV
Trigger: CACCATCCTGGCCGCGCGCCAGGAGCACTGCGGCTG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAGGTGCTGCGGCATGTaGCTAGTTCCTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDRCCGM*LVPSTS
Trigger: AGACGTGGAAGGAACTAGCCACATGCCGCAGCACCT...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAGTCCCTGGTTCCAGCTaGGTAGTGCGAGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSVPGSS*VVRGAA
Trigger: TGCAGCCCCTCGCACTACCCAGCTGGAACCAGGGAC...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000578202.1
3UTR CAA 72 bp GTGATCTTGCAGGAGAATCGTCCCATCTGTCCTTCTTaGACCACAACTCGGCCCAGCTTGGTAGCAAACTTT +
Preference number: 4 (lower is better)
Translates to: VILQENRPICPS*TTTRPSLVANF
Trigger: AAAGTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATTCTCCTGCAAGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAACAGGAAAGGCGTCCTaGAGCTCTCGGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSTGKAS*SSRLGS
Trigger: GCTTCCCAGCCGAGAGCTTCAGGACGCCTTTCCTGT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCCGGTGGCTCCTTCTTTaGTGCAGAGGTTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCRWLLL*CRGSEG
Trigger: CCCCTCGGAACCTCTGCATCAAAGAAGGAGCCACCG...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTATGGTCACCTCTTTCCTaGCATCTGAATTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SNLGNAESLWPSMGILLLWSPLS*HLNWWL
Trigger: AAGCCACCAATTCAGATGTCAGGAAAGAGGTGACCA...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAGACTCCCTTGGGGGCTaGGGCTGGCTGTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVDSLGG*GWLFAA
Trigger: GGCTGCAAACAGCCAGCCTCAGCCCCCAAGGGAGTC...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGGAGACGGAGCAGAGTaGGCCTTCCTGGGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSGDGAE*AFLGED
Trigger: ATCCTCTCCCAGGAAGGCTCACTCTGCTCCGTCTCC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGCAGGTCCTGGACGTTaGAAGAGGTGCTGCGGCATG +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSAGPGR*KRCCGM
Trigger: CATGCCGCAGCACCTCTTTCAACGTCCAGGACCTGC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACCTTCTCATCATCATCTaGCACCTCCACTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: NRPICPSLTTTRPSLVANLLIII*HLHFIL
Trigger: AAGGATGAAGTGGAGGTGTCAGATGATGATGAGAAG...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGCAAAGTCCTCGTCAATaGTGCGCTCAAACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSQSPRQ*CAQTAP
Trigger: GGGAGCTGTTTGAGCGCATCATTGACGAGGACTTTG...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGTTGACTGGTCATCTTTaGACCAGACAACCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGLTGHL*TRQPRG
Trigger: ACCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAA...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGGCGGGACTCCCTGATTaGCTGGTCATCTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSAGLPD*LVIFEP
Trigger: TGGTTCAAAGATGACCAGTCAATCAGGGAGTCCCGC...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAAGGACTGCCCCGCCCTaGCATCAGCTTCCCTATCCT +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSRTAPP*HQLPYP
Trigger: AGGATAGGGAAGCTGATGTCAGGGCGGGGCAGTCCT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGGACTACAGTTTCCCCTaGGCAGTGCATACCATCCAA +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGDYSFP*AVHTIQ
Trigger: TTGGATGGTATGCACTGCTCAGGGGAAACTGTAGTC...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGGAACAAGGACCTCCTaGGAGCCGAGGTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSGTRTS*EPRFCQ
Trigger: CTGGCAGAACCTCGGCTCTCAGGAGGTCCTTGTTCC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000578202.1
CDS-3UTR GCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCCTGGCGAGCACCACTaGCATTGGTGGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMPGEHH*HWWLHR
Trigger: CCTGTGAAGCCACCAATGGCAGTGGTGCTCGCCAGG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTCTTCATAAACCTCAATaGTGCCTTCCTGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLLHKPQ*CLPVSS
Trigger: TGAGGAGACAGGAAGGCAGCATTGAGGTTTATGAAG...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGAGGTTGACCTGGGCCTaGCTGCTGCCCAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMRLTWA*LLPSLF
Trigger: GAACAAGCTGGGCAGCAGGCAGGCCCAGGTCAACCT...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAGTCCCAGATCTCGATaGTGTAGGACTGTACAGCAC +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGSPRSR*CRTVQH
Trigger: GTGCTGTACAGTCCTACAGCATCGAGATCTGGGACT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp CATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACCTTGAAGAACTTCCCTaGCCAGACTTTTCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: HGFPEPACRSSQTQTHGHLEELP*PDFSSF
Trigger: AAAACTCGAAAAGTCTGGGCAGGGAAGTTCTTCAAG...GTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTTTCCAGAGAGAGTCTTaGCCCATCAGAAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVFQRES*PIRRKK
Trigger: TTTCTTCCTTCTGATGGGGCAAGACTCTCTCTGGAA...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360772.7
CDS-3UTR GCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGACATCCAACTCTGGTTaGGACCAGGTCCGTTCTATC +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGTSNSG*DQVRSI
Trigger: GATAGAACGGACCTGGTCGCAACCAGAGTTGGATGT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGCAGAACCTTGGCTGCTaGAAGAGGGAACCCTCATAT +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGQNLGC*KREPSY
Trigger: ATATGAGGGTTCCCTCTTGCAGCAGCCAAGGTTCTG...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATATTGCTTGAGGGCAATTaGCCAGGCTGGGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGILLEGN*PGWVPV
Trigger: CACAGGAACCCAGCCTGGGCAATTGCCCTCAAGCAA...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAAAGAGGAGACCTACTaGAGTGAGCGGGATGACCTT +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGKEETY*SERDDL
Trigger: AAGGTCATCCCGCTCACTGCAGTAGGTCTCCTCTTT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCATGGCAACTGGGCCAGTaGGACAGGAAAGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSWQLGQ*DRKGVL
Trigger: CAGGACGCCTTTCCTGTCCCACTGGCCCAGTTGCCA...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCTGGCAACTGGGCCAGTaGGACAGGAAAGGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSWQLGQ*DRKGVL
Trigger: CAGGACGCCTTTCCTGTCCCACTGGCCCAGTTGCCA...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATCTCTGTTGTTTGTTGTaGCAACTGGGCCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDLCCLL*QLGQWD
Trigger: GTCCCACTGGCCCAGTTGCCACAACAAACAACAGAG...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGCCTCTGTCAGGGGCATaGAGTCAACTCTTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSPLSGA*SQLLRD
Trigger: ATCCCTCAAGAGTTGACTCCATGCCCCTGACAGAGG...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTCTGCGGGGCCGTTCTaGGCGAGTCCTTGCATGACT +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMSAGPF*ASPCMT
Trigger: AGTCATGCAAGGACTCGCCCAGAACGGCCCCGCAGA...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGAGTGATCCGGGGCACTaGGGTCCCCCGTACGGAGCA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKSDPGH*GPPYGA
Trigger: TGCTCCGTACGGGGGACCCCAGTGCCCCGGATCACT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCCCGTGGAAGGGCTCTaGCAGAGCTGTTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLPVEGL*QSCSVA
Trigger: TGCTACAGAACAGCTCTGCCAGAGCCCTTCCACGGG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGGGTCTCGGCAGGCTTaGCGTTGCCCATTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSGSRQA*RCPLAS
Trigger: TGAAGCCAATGGGCAACGCCAAGCCTGCCGAGACCC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACAGGAGCACTCCGCCTaGCCAGCGTCATTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSQEHSA*PASFLA
Trigger: AGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCATCATCCACGGTGACTTaGCAGGAGCACTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSSSTVT*QEHSAW
Trigger: CCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGA...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGCCTTCCACGTCTTGTTaGCTGAGTCCCAGATCTCGA +
Preference number: 4 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSPSTSC*LSPRSR
Trigger: TCGAGATCTGGGACTCAGCCAACAAGACGTGGAAGG...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATTGGACCAGCTTAGGGTaGTGGAGGCAGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDWTSLG*WRQFMM
Trigger: CATCATGAACTGCCTCCACCACCCTAAGCTGGTCCA...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACGACTCCCTGATTGACTaGTCATCTTTGAACCAGACA +
Preference number: 4 (lower is better)
Translates to: NRPICPSLTTTRPSLVANDSLID*SSLNQT
Trigger: TGTCTGGTTCAAAGATGACCAGTCAATCAGGGAGTC...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGTCCTTATGTGTGACCTaGTTCCTAACAGGCTACTTA +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGSLCVT*FLTGYL
Trigger: TAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGA...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGCCCAGGCAGGCTTGTaGAGTTTCCCAGGATTAGGG +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLAQAGL*SFPGLG
Trigger: CCCTAATCCTGGGAAACTCCACAAGCCTGCCTGGGC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCCCCGCCTTGAGCCCATaGGCTCCCCAATTCCAGACA +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSPALSP*APQFQT
Trigger: TGTCTGGAATTGGGGAGCCCATGGGCTCAAGGCGGG...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGAGAAACACTCTGGCTaGCCCCTGCACAAGTCTATG +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDEKHSG*PLHKSM
Trigger: CATAGACTTGTGCAGGGGCCAGCCAGAGTGTTTCTC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGAAGCAGCTGTTCCCTaGAACAAGGACCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDEAAVP*NKDLLR
Trigger: TCTCAGGAGGTCCTTGTTCCAGGGAACAGCTGCTTC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000578202.1
3UTR CAA 72 bp TCAGACTCCTGGCTTGGCTCACTGGTTCCATACACGTaGATTGCACGTACACGGAACTTATATTCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SDSWLGSLVPYT*IARTRNLYSWS
Trigger: TGACCACGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGTTGAGGGATCCACACTaGGGGAGGTTTTGGAAATGT +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGLRDPH*GRFWKC
Trigger: ACATTTCCAAAACCTCCCTCAGTGTGGATCCCTCAA...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AGCTTCGACTCCTTTGAGATTACATTGGTCACCTCTTTCCTGACATCTGAATTGGATGGAAAGTTCAGCTaGCATCGAGGCCTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SFDSFEITLVTSFLTSELDGKFS*HRGLPR
Trigger: TCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATC...CAATTCAGATGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTCTCTTTCCTGACATCTaGATTGGTGGCTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVLFPDI*IGGFCF
Trigger: GAAACAAAAGCCACCAATTCAGATGTCAGGAAAGAG...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGACTCCCTTGGGGGCTaGGGCTGGCTGTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLDSLGG*GWLFAA
Trigger: GGCTGCAAACAGCCAGCCTCAGCCCCCAAGGGAGTC...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCATCTTTTCATGGACGGTaGCCCAGGCGCTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSSFHGR*PRRCRT
Trigger: TGTCCTGCAGCGCCTGGGTCACCGTCCATGAAAAGA...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCCCTCAGGGAACTGGATaGTCTGAGGGGGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCPQGTG*SEGALL
Trigger: CAGCAATGCCCCCTCAGATCATCCAGTTCCCTGAGG...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGTACAGGTGATGGGCTaGGTGCCTGTCACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLVQVMG*VPVTLP
Trigger: TGGCAAAGTGACAGGCACTCAGCCCATCACCTGTAC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTGCGCGGCCAGGATGGTaGGCTTGCTGCCATTCTCGC +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLARPGW*ACCHSR
Trigger: GCGAGAATGGCAGCAAGCTCACCATCCTGGCCGCGC...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTCTGCCGCATGTACTTaGTGCACTCACGCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLSAACT*CTHAPS
Trigger: TGACGGAGCGTGAGTGCATCAAGTACATGCGGCAGA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCCTGCCACTGAGCCCTaGGATCATTGCCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLPATEP*DHCHRG
Trigger: TCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCTTCCTGTGTCGCTGGTaGGCAGTATCTGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSFLCRW*AVSAPA
Trigger: GGCTGGTGCAGATACTGCTCACCAGCGACACAGGAA...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGGTGAGGCTGGGTCGCTaGACAGAATCCACGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKVRLGR*TESTQP
Trigger: GGGCTGCGTGGATTCTGTTCAGCGACCCAGCCTCAC...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGCTACTTGTCCTCCCTaGGAGAGGGAGGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSATCPP*EREETA
Trigger: GGCTGTTTCCTCCCTCTCTCAGGGAGGACAAGTAGC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAATTGAGCCAGGTGACCTaGGGTTGGGGCCGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIELSQVT*GWGRPV
Trigger: CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAA...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGAGTGCCTGTCACTTTaGCAAACAGCTCCACTGACT +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDECLSL*QTAPLT
Trigger: AGTCAGTGGAGCTGTTTGGCAAAGTGACAGGCACTC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTACTGCCAATAATGAACTaGACCAAAGTCACCAATTCA +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALLPIMN*TKVTNS
Trigger: TGAATTGGTGACTTTGGTGCAGTTCATTATTGGCAG...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCGGCTCCCACCTCTGTaGCTTCTCCTCCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQERLPPL*LLLHLC
Trigger: GCACAGGTGGAGGAGAAGGCACAGAGGTGGGAGCCG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGCCAGCCATCCTGGCTTaGCCAGGCAGGCTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKPAILA*PGRLVE
Trigger: CTCCACAAGCCTGCCTGGGCAAGCCAGGATGGCTGG...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGTGGCCCTGCGGAGAATaGCTCTGCAGGCTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKWPCGE*LCRLRP
Trigger: TGGCCTGAGCCTGCAGAGGCATTCTCCGCAGGGCCA...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAACCACCGTGTGGCCCTaGGGAGAATGCCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVTTVWP*GECLCR
Trigger: CCTGCAGAGGCATTCTCCGCAGGGCCACACGGTGGT...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAGCCTCCTGCCATCCTTaGTGCAGACTGCTCTCATGC +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSASCHP*CRLLSC
Trigger: GCATGAGAGCAGTCTGCAGCAAGGATGGCAGGAGGC...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGAGCACCACTGCCATTaGTGGCTTCACAGGTATACT +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDEHHCH*WLHRYT
Trigger: AGTATACCTGTGAAGCCACCAATGGCAGTGGTGCTC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCCAGGCCTGGTGCTCTTaGTTCCGGCTGAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSQAWCS*FRLNSC
Trigger: GCAAGAGTTCAGCCGGAACCAAGAGCACCAGGCCTG...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCCAGCTACAGGACAGCTaGCCTTGGGCGTTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSQLQDS*PWALEA
Trigger: TGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAGCTG...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCAGTCCTTCAGGACACTaGAGAAGGAGGGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSSPSGH*RRRGPP
Trigger: AGGTGGCCCCCTCCTTCTCCAGTGTCCTGAAGGACT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATAGGCTCCCTCCCCCGTaGAAGGGCTCTGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYRLPPP*KGSGRA
Trigger: AGCTCTGCCAGAGCCCTTCCACGGGGGAGGGAGCCT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCCCTGCGCGTACCTTCTaGTCCTCAGGGAACTGGATG +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCPARTF*SSGNWM
Trigger: CATCCAGTTCCCTGAGGACCAGAAGGTACGCGCAGG...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTGCTCCACATGTCTGTaGCGTAGCCGATGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLCSTCL*RSRWAH
Trigger: ATGAGCCCATCGGCTACGCCACAGACATGTGGAGCA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGGTAGGTCAAGTTCTTTaGAGAGTGTTGAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGVGQVL*RVLRMK
Trigger: CTTCATTCTCAACACTCTCCAAAGAACTTGACCTAC...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGTAGGTCAAGTTCTTTaGAGAGTGTTGAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALVGQVL*RVLRMK
Trigger: CTTCATTCTCAACACTCTCCAAAGAACTTGACCTAC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGAGAGGGGGTGGTTTTaGGATTATTCAAGCACATTA +
Preference number: 4 (lower is better)
Translates to: ILGWLETQMAAAATISCVERGWF*DYSSTL
Trigger: TAATGTGCTTGAATAATCCCAAAACCACCCCCTCTC...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGACCATCCAAATGGGATaGCCAAGAATACTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGTIQMG*PRILRA
Trigger: AGCACGGAGTATTCTTGGCCATCCCATTTGGATGGT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGCGGTGGCTCCTTCTTTaGTGCAGAGGTTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKRWLLL*CRGSEG
Trigger: CCCCTCGGAACCTCTGCATCAAAGAAGGAGCCACCG...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCCATCTGTCCTTCTTTaGCCACAACTCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMPSVLL*PQLGPA
Trigger: AGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCCTCTTTCCTGACATCTaGATTGGTGGCTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SLPMALTALPVFCHFLLALFPDI*IGGFCF
Trigger: GAAACAAAAGCCACCAATTCAGATGTCAGGAAAGAG...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATCAGCTTCGACTCCTTTaGGATTACATTGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDQLRLL*DYIGHL
Trigger: GAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCTG...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAAATTTGGGGAATGCTaGATCCCTCTGGCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIKFGEC*IPLALH
Trigger: ATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTT...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGGCTGGGTGCCATCGTaGGGCTCTTGTACCGTGAGC +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEGWVPS*GSCTVS
Trigger: GCTCACGGTACAAGAGCCTCACGATGGCACCCAGCC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCACTGCCCCCATCATATaGGGAGCCATACCAGGACAG +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSTAPII*GAIPGQ
Trigger: CTGTCCTGGTATGGCTCCTCATATGATGGGGGCAGT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCACTGCCCCCATCATATaGGGAGCCATACCAGGACAG +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCTAPII*GAIPGQ
Trigger: CTGTCCTGGTATGGCTCCTCATATGATGGGGGCAGT...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCCCACGTCTTGTTGGCTaGGTCCCAGATCTCGATGCT +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSPRLVG*VPDLDA
Trigger: AGCATCGAGATCTGGGACTCAGCCAACAAGACGTGG...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAGCAGGTCCTGGACGTTaGAAGAGGTGCTGCGGCATG +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVAGPGR*KRCCGM
Trigger: CATGCCGCAGCACCTCTTTCAACGTCCAGGACCTGC...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCAAAGTCCTCGTCAATaGTGCGCTCAAACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLQSPRQ*CAQTAP
Trigger: GGGAGCTGTTTGAGCGCATCATTGACGAGGACTTTG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACCTGCCACTGAGCCCTaGGATCATTGCCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSPATEP*DHCHRG
Trigger: TCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAGTGGAGGAGCACAGCTaGTATGTGCTCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSVEEHS*YVLRMV
Trigger: CACCATCCTGAGCACATATCAGCTGTGCTCCTCCAC...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGTTAGACTCACTGCTCTaGGGACTGCCCCGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKLDSLL*GLPRPD
Trigger: GTCAGGGCGGGGCAGTCCTCAGAGCAGTGAGTCTAA...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTCCTCTGCCACCACAGTaGGGCTGGGTCGCTGAACAG +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLPLPPQ*GWVAEQ
Trigger: CTGTTCAGCGACCCAGCCTCACTGTGGTGGCAGAGG...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAACACGGGCACTCGGCTaGAGTGGAACATTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSTRALG*SGTFPL
Trigger: CAAGGGAAATGTTCCACTGCAGCCGAGTGCCCGTGT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGAGGACTGTACAGCACTaGCCCCATCATATGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLRTVQH*PHHMRS
Trigger: GCTCCTCATATGATGGGGGCAGTGCTGTACAGTCCT...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTCCCAGATCTCGATaGTGTAGGACTGTACAGCAC +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGISPRSR*CRTVQH
Trigger: GTGCTGTACAGTCCTACAGCATCGAGATCTGGGACT...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCATCCATACACGTTGATTaGACGTACACGGAACTTATA +
Preference number: 4 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPSIHVD*TYTELI
Trigger: TATAAGTTCCGTGTACGTGCAATCAACGTGTATGGA...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGCTGAAGGCACTGCGTaGAGTCCAGGCGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSAEGTA*SPGGFS
Trigger: TGAAAAACCGCCTGGACTGCACGCAGTGCCTTCAGC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360304.8
CDS-3UTR GCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTTCCACAATGAGCTCTaGTGTGCAGGTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLFHNEL*CAGGFS
Trigger: GGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAAGAGACCCAGATGGCTaGAGCAGCCACCATCTCATG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSRDPDG*SSHHLM
Trigger: CATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGCCCCCATTCGCCTTTaGTCCCTCTTTCAACCTCTG +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSAPIRL*SLFQPL
Trigger: CAGAGGTTGAAAGAGGGAGCAAAGGCGAATGGGGGC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGCACTGCTCTGAGGACTaGCCCGCCCTGACATCAGCT +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKHCSED*PALTSA
Trigger: AGCTGATGTCAGGGCGGGGCAGTCCTCAGAGCAGTG...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGGCACAGAACCTTGGCTaGTGCAAGAGGGAACCCTCA +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMAQNLG*CKREPS
Trigger: TGAGGGTTCCCTCTTGCAGCAGCCAAGGTTCTGTGC...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCCCACTCCACCCCACTaGACAGAACCTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEPTPPH*TEPWLL
Trigger: CAGCAGCCAAGGTTCTGTGCAGTGGGGTGGAGTGGG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATCCTACCTGCCCCCATTaGTACACCTTTCCAACATAT +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDPTCPH*YTFPTY
Trigger: ATATGTTGGAAAGGTGTAGCAATGGGGGCAGGTAGG...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACACCAGCCTCCTTCATaGAGCACAAATTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSHQPPS*STNSLP
Trigger: GGGCAGGGAATTTGTGCTGCATGAAGGAGGCTGGTG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTCCTGCCATCCTTGCTaGAGACTGCTCTCATGCACT +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLSCHPC*RLLSCT
Trigger: AGTGCATGAGAGCAGTCTGCAGCAAGGATGGCAGGA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACCTGAAGCTCTCGGCTaGGAAGCTCCTGAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSPEALG*EAPEVA
Trigger: AGCAACTTCAGGAGCTTCCCAGCCGAGAGCTTCAGG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCTCTGTTGTTTGTTGTaGCAACTGGGCCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLLCCLL*QLGQWD
Trigger: GTCCCACTGGCCCAGTTGCCACAACAAACAACAGAG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCCTCTGTCAGGGGCATaGAGTCAACTCTTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLPLSGA*SQLLRD
Trigger: ATCCCTCAAGAGTTGACTCCATGCCCCTGACAGAGG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAAACTCCACTGTCACCTaGCGAGCACCACTGCCATTG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSNSTVT*RAPLPL
Trigger: CAATGGCAGTGGTGCTCGCCAGGTGACAGTGGAGTT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCTACTCTTCTTTTCATaGACGGTGACCCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLLLFFS*TVTQAL
Trigger: CAGCGCCTGGGTCACCGTCCATGAAAAGAAGAGTAG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGGGGTCTCGGCAGGCTTaGCGTTGCCCATTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKGSRQA*RCPLAS
Trigger: TGAAGCCAATGGGCAACGCCAAGCCTGCCGAGACCC...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGGCCAGCGTCATTCTTaGCTACACACTTGTATAAGC +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDGQRHS*LHTCIS
Trigger: GCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGGGCCAGCGTCATTCTTaGCTACACACTTGTATAAGC +
Preference number: 4 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSGQRHS*LHTCIS
Trigger: GCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCC...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCGGTGTTCTCACTGGCTaGAGCATCATCCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCGVLTG*SIIHGD
Trigger: GTCACCGTGGATGATGCTCCAGCCAGTGAGAACACC...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGGTGTTCTCACTGGCTaGAGCATCATCCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSGVLTG*SIIHGD
Trigger: GTCACCGTGGATGATGCTCCAGCCAGTGAGAACACC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACCTTGGTGTTCTCACTaGCTGGAGCATCATCCACGG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSPWCSH*LEHHPR
Trigger: CCGTGGATGATGCTCCAGCCAGTGAGAACACCAAGG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTACAGTGAGGTTGACCTaGGCCTGCCTGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLTVRLT*ACLLPS
Trigger: GCTGGGCAGCAGGCAGGCCCAGGTCAACCTCACTGT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGAGGTGCTGCGGCATGTaGCTAGTTCCTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMRCCGM*LVPSTS
Trigger: AGACGTGGAAGGAACTAGCCACATGCCGCAGCACCT...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAAAGGCATCCACACACTaGACCAGCTTAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSKASTH*TSLGWW
Trigger: CCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAGACAACCTCGGGGTCTaGGTATCCTTCAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIDNLGV*VSFNLA
Trigger: TGCAAGATTGAAGGATACCCAGACCCCGAGGTTGTC...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGGACTCCCTGATTGACTaGTCATCTTTGAACCAGACA +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGDSLID*SSLNQT
Trigger: TGTCTGGTTCAAAGATGACCAGTCAATCAGGGAGTC...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCTACTTACCGGGGGTTaGGGACACCTGCTCTATAAG +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLLLTGG*GHLLYK
Trigger: CTTATAGAGCAGGTGTCCCCAACCCCCGGTAAGTAG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATACTTGGTCCATACTGCTaGGGTCTTTATGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGILGPYC*GLYGSQ
Trigger: CTGGGAACCATAAAGACCCCAGCAGTATGGACCAAG...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGGTCAGTTCCCCTCTCTaGGCCTCAGTAGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKVSSPL*ASVAWE
Trigger: CTCCCAGGCTACTGAGGCCCAGAGAGGGGAACTGAC...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCGCAGAACCACCGTGTaGCCCTGCGGAGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYRRTTV*PCGECL
Trigger: GAGGCATTCTCCGCAGGGCCACACGGTGGTTCTGCG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGATGTCACCACAGACTaGCTACTTGTCCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLDVTTD*LLVLPE
Trigger: CTCAGGGAGGACAAGTAGCCAGTCTGTGGTGACATC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
3UTR CAA 72 bp TCCAGACTGTCCAGCTTCGACTCCTTTGAGATTACATaGGTCACCTCTTTCCTGACATCTGAATTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SRLSSFDSFEIT*VTSFLTSELVA
Trigger: AGCCACCAATTCAGATGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCTGGACAGTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
3UTR CAA 72 bp GCTTCTCCAAGACTGTTGACAGCCTTGCAGGTGTACTaGGCATCGTCATCCCCGCAAACATCACTAATAATT +
Preference number: 4 (lower is better)
Translates to: ASPRLLTALQVY*ASSSPQTSLII
Trigger: AATTATTAGTGATGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGGAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCATGAATCACAAGGCTaGAAGTCCCCCGGATGCCGC +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEHESQG*KSPGCR
Trigger: GCGGCATCCGGGGGACTTTCAGCCTTGTGATTCATG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGGAGACGGAGCAGAGTaGGCCTTCCTGGGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEGDGAE*AFLGED
Trigger: ATCCTCTCCCAGGAAGGCTCACTCTGCTCCGTCTCC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTACCAGGACAGGGTCAGTaGGGAGCTCCGAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVPGQGQ*GAPNVR
Trigger: TCTGACATTCGGAGCTCCTCACTGACCCTGTCCTGG...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACCTTTTTGTTCAGTATTaGTTGTCACTGTCCGGTAAT +
Preference number: 4 (lower is better)
Translates to: NRPICPSLTTTRPSLVANLFVQY*LSLSGN
Trigger: ATTACCGGACAGTGACAATCAATACTGAACAAAAAG...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCAGGATTTCCTGCCACTaGGCCCTGAGATCATTGCCA +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSRISCH*ALRSLP
Trigger: TGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAGCGGGACTCCCTGATTaGCTGGTCATCTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSAGLPD*LVIFEP
Trigger: TGGTTCAAAGATGACCAGTCAATCAGGGAGTCCCGC...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGTCTCTGTATTCTGACTaGGGTTCCACACCTAATTCA +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGSLYSD*GSTPNS
Trigger: TGAATTAGGTGTGGAACCTCAGTCAGAATACAGAGA...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTACTCCGTGCTATACTaGGTCCAGTGTTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLYSVLY*VQCFLP
Trigger: GGGGAGAAAACACTGGACTCAGTATAGCACGGAGTA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTAAGGAACACCCGCCTTaGGCCCATGGGCTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLKEHPP*AHGLPN
Trigger: ATTGGGGAGCCCATGGGCTCAAGGCGGGTGTTCCTT...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGGGGGGCTGGACAAGATaGTCTCCAAGGTCCCATTTA +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMGGWTR*SPRSHL
Trigger: TAAATGGGACCTTGGAGATCATCTTGTCCAGCCCCC...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCGTTCTTGCTTTTGGCTaGAGCCTCCAGACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCVLAFG*SLQTVQ
Trigger: CTGGACAGTCTGGAGGCTGCAGCCAAAAGCAAGAAC...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAGTTCTTGCTTTTGGCTaGAGCCTCCAGACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSVLAFG*SLQTVQ
Trigger: CTGGACAGTCTGGAGGCTGCAGCCAAAAGCAAGAAC...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCATTCTGGGCGAGTCCTTaGATGACTCCAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSFWASP*MTPAWT
Trigger: AGTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAA...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCCTGGCTTTGGGGCTTaGTCTCAAATTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLPGFGA*SQIWGM
Trigger: CATTCCCCAAATTTGAGAGCAAGCCCCAAAGCCAGG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCCCCGTACGGAGCACTaGAGCACAAAATCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLPRTEH*STKSWP
Trigger: GGGCCAGGATTTTGTGCTGCAGTGCTCCGTACGGGG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTTCTCCACCTTCATGTaGTCGCTTTCCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLFSTFM*SLSWIC
Trigger: GCAGATCCAGGAAAGCGAGCACATGAAGGTGGAGAA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAATGATGCTAATCTCCTaGCGGATATTCTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SNLGNAESLWPSMGILLLMMLIS*RIFSFS
Trigger: AGAGAAAGAGAATATCCGGCAGGAGATTAGCATCAT...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR GCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCACTCCCTCCGAGATCTaGCGCATGTACTTGATGCAC +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSTPSEI*RMYLMH
Trigger: GTGCATCAAGTACATGCGGCAGATCTCGGAGGGAGT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTGGCTCTCACAGCATTaGCCGTTTTCTGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLWLSQH*PFSAIS
Trigger: GGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCATTCCACAATGAGCTCTaGTGTGCAGGTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSFHNEL*CAGGFS
Trigger: GGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAGCCCTTGGTCCATACTaGTGGGGTCTTTATGGTTCC +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSALGPY*WGLYGS
Trigger: GGAACCATAAAGACCCCAGCAGTATGGACCAAGGGC...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAATGTCAGACCAGCCTaGTTCCTAATCAACCCGATT +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDNVRPA*FLINPI
Trigger: AATCGGGTTGATTAGGAAGCAGGCTGGTCTGACATT...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATACACCACTGCCATTGGTaGCTTCACAGGTATACTTTC +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIHHCHW*LHRYTF
Trigger: GAAAGTATACCTGTGAAGCCACCAATGGCAGTGGTG...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAAGCGAGCGTACTGGATaGGCTGCCCATTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIESERTG*AAHSAA
Trigger: GGCTGCTGAATGGGCAGCCCATCCAGTACGCTCGCT...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTTCATCCACGGTGACTTaGCAGGAGCACTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLSSTVT*QEHSAW
Trigger: CCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGA...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGACAAGGTGTGCCAGCTaGGGGGTCTGGCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQETRCAS*GVWLIH
Trigger: GTGGATAAGCCAGACCCCCCAGCTGGCACACCTTGT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCGGAACTTATATTCGTaGTCAGGCAGCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMRNLYS*SGSRSW
Trigger: CCAGGACCTGCTGCCTGACCACGAATATAAGTTCCG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCGTGAGTTCAGACTCCTaGCTTGGCTCACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCVSSDS*LGSLVP
Trigger: TGGAACCAGTGAGCCAAGCCAGGAGTCTGAACTCAC...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGCTTCGACTCCTTTGAGATTACATTGGTCACCTCTTTCCTGACATCTGAATTGACCAGCTTAGGGTGGTaGAGGCAGTTCATGATGCTA +
Preference number: 4 (lower is better)
Translates to: SFDSFEITLVTSFLTSELTSLGW*RQFMML
Trigger: TAGCATCATGAACTGCCTCCACCACCCTAAGCTGGT...CAATTCAGATGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGAGGACAGTCTTCCAATaGCTCTCACAGCATTGCCCG +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMRTVFQ*LSQHCP
Trigger: CGGGCAATGCTGTGAGAGCCATTGGAAGACTGTCCT...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCAGGACAGTCTTCCAATaGCTCTCACAGCATTGCCCG +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSRTVFQ*LSQHCP
Trigger: CGGGCAATGCTGTGAGAGCCATTGGAAGACTGTCCT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGACAACCTCGGGGTCTaGGTATCCTTCAATCTTGCA +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLDNLGV*VSFNLA
Trigger: TGCAAGATTGAAGGATACCCAGACCCCGAGGTTGTC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCCCTTGCAGGTGTACTTaGCATCGTCATCCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCPCRCT*HRHPRK
Trigger: TTTGCGGGGATGACGATGCCAAGTACACCTGCAAGG...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACCTTGCAGGTGTACTTaGCATCGTCATCCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSPCRCT*HRHPRK
Trigger: TTTGCGGGGATGACGATGCCAAGTACACCTGCAAGG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCCTCTGGGCTGAGCTGTaGCCCAGAACTCTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSLWAEL*PRTLVL
Trigger: CAAAACAAGAGTTCTGGGCCACAGCTCAGCCCAGAG...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACTCTGGGCTGAGCTGTaGCCCAGAACTCTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSLWAEL*PRTLVL
Trigger: CAAAACAAGAGTTCTGGGCCACAGCTCAGCCCAGAG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGAATTGCTGGAGTACTaGGAGAAAACCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDELLEY*EKTQFS
Trigger: AGAGAACTGGGTTTTCTCCCAGTACTCCAGCAATTC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGTCAGAAATGAATTGCTaGAGTACTGGGAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGSEMNC*STGRKP
Trigger: GGGTTTTCTCCCAGTACTCCAGCAATTCATTTCTGA...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTATACTTTGGAATAAAGTaGCTCAACTGCTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TRTSHMAPSNQEAESEALYFGIK*LNCFQK
Trigger: TTTCTGAAAGCAGTTGAGCCACTTTATTCCAAAGTA...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGCAATTGCCCAGGCTaGGTTCCTGTGTCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLGNCPG*VPVSLV
Trigger: CACCAGCGACACAGGAACCCAGCCTGGGCAATTGCC...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCCTGTCTTCACCTGTGTaGTGTGGCGAGACGATGTCT +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSLSSPV*CGETMS
Trigger: AGACATCGTCTCGCCACACCACACAGGTGAAGACAG...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGCCTCAAGGAAAGCTTaGGACACATCTTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDASRKA*DTSSDS
Trigger: AGAATCTGAAGATGTGTCCCAAGCTTTCCTTGAGGC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578202.1
3UTR CAA 72 bp CATTTCCTTCTTGCCATGTACTTCTTCATCCGGTCCTaGGAGAGTTTCTTGGCCTCCATGTTCTTGGTATCT +
Preference number: 4 (lower is better)
Translates to: HFLLAMYFFIRS*ESFLASMFLVS
Trigger: AGATACCAAGAACATGGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGAAGTACATGGCAAGAAGGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCGGCTGGGAAGCTCCTaGAGTTGCTCTGAACTGCAG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLRLGSS*SCSELQ
Trigger: CTGCAGTTCAGAGCAACTTCAGGAGCTTCCCAGCCG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGGTTTTGGAAATGTGTaGCGAGGCAACCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSGFGNV*RGNQLH
Trigger: GTGAAGCTGGTTGCCTCGTCACACATTTCCAAAACC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAGGTTTTGGAAATGTGTaGCGAGGCAACCAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSGFGNV*RGNQLH
Trigger: GTGAAGCTGGTTGCCTCGTCACACATTTCCAAAACC...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCATGAATCACAAGGCTaGAAGTCCCCCGGATGCCGC +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLHESQG*KSPGCR
Trigger: GCGGCATCCGGGGGACTTTCAGCCTTGTGATTCATG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGGATGGAAAGTTCAGCTaGCATCGAGGCCTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKDGKFS*HRGLPR
Trigger: TCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATC...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTGGTCACCTCTTTCCTaGCATCTGAATTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLWSPLS*HLNWWL
Trigger: AAGCCACCAATTCAGATGTCAGGAAAGAGGTGACCA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTCCAGGACAGGGTCAGTaGGGAGCTCCGAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLPGQGQ*GAPNVR
Trigger: TCTGACATTCGGAGCTCCTCACTGACCCTGTCCTGG...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTACCTGCCACTGAGCCCTaGGATCATTGCCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVPATEP*DHCHRG
Trigger: TCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGG...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGCCTGCCACTGAGCCCTaGGATCATTGCCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKPATEP*DHCHRG
Trigger: TCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGG...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCCATCGTTTCCACAATaGGCTCTGCTGTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEPSFPQ*ALLCRW
Trigger: CCACCTGCACAGCAGAGCTCATTGTGGAAACGATGG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGGGTGATTTCCCTAAATaGAATCTAGCTGCACTAGTA +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGGDFPK*NLAALV
Trigger: TACTAGTGCAGCTAGATTTCATTTAGGGAAATCACC...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATCAGCTCTTTATCAGTTaGAATCTGTTTCATCGTGGC +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDQLFIS*NLFHRG
Trigger: GCCACGATGAAACAGATTTCAACTGATAAAGAGCTG...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATTATTGTTTGAACATCTaGAGACATGGGGAACTTGCC +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDYCLNI*RHGELA
Trigger: GGCAAGTTCCCCATGTCTTCAGATGTTCAAACAATA...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCTTAGGATGTAGCAGATaGCCCCGATGCTCCACATGT +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSLGCSR*PRCSTC
Trigger: ACATGTGGAGCATCGGGGTCATCTGCTACATCCTAA...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360772.7
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCACCTGGTGTGGTAAATaGCCAGTGTTCCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSTWCGK*PVFQLP
Trigger: AGGCAACTGGAACACTGGTCATTTACCACACCAGGT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAACTCACCTTGCACTTaGGGGAGGCCTGGAGACCCA +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLNSPCT*GRPGDP
Trigger: TGGGTCTCCAGGCCTCCCTCAAGTGCAAGGTGAGTT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCGCAGCAGCATCGCTTaGGGCCAGGAGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYRSSIA*GQEFKT
Trigger: AGTCTTGAACTCCTGGCCTCAAGCGATGCTGCTGCG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTACCAAAGACTTATTGCTaGCTGGGCCTAGCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVPKTYC*LGLAGL
Trigger: TAGCCCCGCTAGGCCCAGTCAGCAATAAGTCTTTGG...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGGTTGCCCGTTTCTGTaGCATGTCACCTGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEGCPFL*HVTWGS
Trigger: AGAGCCCCAGGTGACATGGCACAGAAACGGGCAACC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGGGGCGTTGGAAGCAGTaGAGCTGTATGTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEGRWKQ*SCMSHC
Trigger: ACAGTGGGACATACAGCTGCACTGCTTCCAACGCCC...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGTCTGTCCTCAGGCAGTaGCTTCTCGATGGAGACGGA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKSVLRQ*LLDGDG
Trigger: TCCGTCTCCATCGAGAAGGCACTGCCTGAGGACAGA...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGATGCTAATCTCCTaGCGGATATTCTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGMMLIS*RIFSFS
Trigger: AGAGAAAGAGAATATCCGGCAGGAGATTAGCATCAT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATACTGCCATTTCCTTCTTaGCATGTACTTCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGILPFPS*HVLLHP
Trigger: CGGATGAAGAAGTACATGGCAAGAAGGAAATGGCAG...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTGCTGAAGGCACTGCGTaGAGTCCAGGCGGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLAEGTA*SPGGLG
Trigger: TCCTAAACCGCCTGGACTGCACGCAGTGCCTTCAGC...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCTTCTCTGGCACAGCTaGAGAGAGTTCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLLLWHS*REFWAT
Trigger: GGTGGCCCAGAACTCTCTGCAGCTGTGCCAGAGAAG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCATGACCTTACTGTCATaGCTCCTGCCATCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSMTLLS*LLPSLL
Trigger: CAGCAAGGATGGCAGGAGGCATGACAGTAAGGTCAT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAAGGCAACGGCACTTTaGTTCTCAGTGACTAGACTT +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIKATAL*FSVTRL
Trigger: AAGTCTAGTCACTGAGAAGCAAAGTGCCGTTGCCTT...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGAACTCCACTGTCACCTaGCGAGCACCACTGCCATTG +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQENSTVT*RAPLPL
Trigger: CAATGGCAGTGGTGCTCGCCAGGTGACAGTGGAGTT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATATCTTGGTTGACTCCATaGATTTCCAGAACCTGCATG +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGISWLTP*ISRTCM
Trigger: CATGCAGGTTCTGGAAATCCATGGAGTCAACCAAGA...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCGGCCACTTCAGGCTTTaGAATCCCGGAAACTTCACA +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCGHFRL*NPGNFT
Trigger: TGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCC...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCATGCAGCACAAAATCCTaGCCCTCAATAACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSCSTKS*PSITAQ
Trigger: CTGCGCTGTTATTGAGGGCCAGGATTTTGTGCTGCA...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCCAGAGTGAGCCTTCCTaGGAGAGGATGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCQSEPS*ERMMNL
Trigger: CAAGTTCATCATCCTCTCCCAGGAAGGCTCACTCTG...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATACAAGGTGTGCCAGCTaGGGGGTCTGGCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYTRCAS*GVWLIH
Trigger: GTGGATAAGCCAGACCCCCCAGCTGGCACACCTTGT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCATTCAGACTCCTGGCTTaGCTCACTGGTTCCATACAC +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSFRLLA*LTGSIH
Trigger: GTGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGAA...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCACCAGCTTAGGGTGGTaGAGGCAGTTCATGATGCTA +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCTSLGW*RQFMML
Trigger: TAGCATCATGAACTGCCTCCACCACCCTAAGCTGGT...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAACGATGCCCTGCTTGTaGATGTACTCCACTCCCTCC +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVTMPCL*MYSTPS
Trigger: GGAGGGAGTGGAGTACATCCACAAGCAGGGCATCGT...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGAGGAGCCACAAATTCTaGGGTGCCAAAGAGGACCTT +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMRSHKF*GAKEDL
Trigger: AAGGTCCTCTTTGGCACCCCAGAATTTGTGGCTCCT...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCTCTTCATCCGGTCCTTaGAGAGTTTCTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCSSSGP*RVSWPP
Trigger: TGGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGA...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAGAATTGCTGGAGTACTaGGAGAAAACCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIELLEY*EKTQFS
Trigger: AGAGAACTGGGTTTTCTCCCAGTACTCCAGCAATTC...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAAACTCTGGCTATCTTaGAGGAGATTCCAAAGTACA +
Preference number: 4 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGKLWLS*RRFQST
Trigger: TGTACTTTGGAATCTCCTCCAAGATAGCCAGAGTTT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATTCCTTATGTGTGACCTaGTTCCTAACAGGCTACTTA +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDSLCVT*FLTGYL
Trigger: TAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGA...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCAAGACAGTTTTTCCATaGACCAGGAGAGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSKTVFP*TRRGGG
Trigger: ACCACCCCCTCTCCTGGTCCATGGAAAAACTGTCTT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAAATCACATCCAACTCTaGTTGCGACCAGGTCCGTTC +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSNHIQL*LRPGPF
Trigger: GAACGGACCTGGTCGCAACCAGAGTTGGATGTGATT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGCATGGAGTCAACTCTTaGGGGATCCACACTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKHGVNS*GIHTEG
Trigger: TCCCTCAGTGTGGATCCCTCAAGAGTTGACTCCATG...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACCACGTCATCTTGGTTaGCTCCATGGATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSPRHLG*LHGFPE
Trigger: TTCTGGAAATCCATGGAGTCAACCAAGATGACGTGG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGATGGAAAGTTCAGCTaGCATCGAGGCCTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEDGKFS*HRGLPR
Trigger: TCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCAGCTTCGACTCCTTTaGGATTACATTGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMQLRLL*DYIGHL
Trigger: GAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCTG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGTACAGGTGATGGGCTaGGTGCCTGTCACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEVQVMG*VPVTLP
Trigger: TGGCAAAGTGACAGGCACTCAGCCCATCACCTGTAC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCTGGTTCCATACACGTTaGTTGCACGTACACGGAACT +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSWFHTR*LHVHGT
Trigger: AGTTCCGTGTACGTGCAATCAACGTGTATGGAACCA...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGCTAGGATGTAGCAGATaGCCCCGATGCTCCACATGT +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKLGCSR*PRCSTC
Trigger: ACATGTGGAGCATCGGGGTCATCTGCTACATCCTAG...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360304.8
CDS-3UTR TCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGAGGATTTCCTGCCACTaGGCCCTGAGATCATTGCCA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKRISCH*ALRSLP
Trigger: TGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTACTAGTTTTTCTGCATTaGGCGGGCTGGTTGGTGACC +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVLVFLH*AGWLVT
Trigger: GGTCACCAACCAGCCCGCTCAATGCAGAAAAACTAG...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCTAGTTTTTCTGCATTaGGCGGGCTGGTTGGTGACC +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQELVFLH*AGWLVT
Trigger: GGTCACCAACCAGCCCGCTCAATGCAGAAAAACTAG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAGCCAGAGTCATCCATaGGCAGGGACCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLSQSHP*AGTCLQ
Trigger: CTGAAGACAGGTCCCTGCTCATGGATGACTCTGGCT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATAGCCAGAGTCATCCATaGGCAGGGACCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYSQSHP*AGTCLQ
Trigger: CTGAAGACAGGTCCCTGCTCATGGATGACTCTGGCT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGAGCATCTTGAGGACCTaGTACTCTGTAACAGTGGTC +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMSILRT*YSVTVV
Trigger: GACCACTGTTACAGAGTATCAGGTCCTCAAGATGCT...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATATCCACAATATTGTTTaGACATCTGAAGACATGGGG +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDIHNIV*TSEDMG
Trigger: CCCCATGTCTTCAGATGTTCAAACAATATTGTGGAT...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCCCCTCTTTCAACCTCTaGGTGACACTCTACTTTCTG +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSPSFNL*VTLYFL
Trigger: CAGAAAGTAGAGTGTCACTCAGAGGTTGAAAGAGGG...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAAAAGCAACTGCAGGCTaGGACAGCTCCAAAGACTTA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSKATAG*DSSKDL
Trigger: TAAGTCTTTGGAGCTGTCTCAGCCTGCAGTTGCTTT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCATTTCCAGAACCTGCATaGCGTTCTTCTCAGACACAG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSFPEPA*RSSQTQ
Trigger: CTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAA...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGGCGTTGGAAGCAGTaGAGCTGTATGTCCCACTGT +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLGRWKQ*SCMSHC
Trigger: ACAGTGGGACATACAGCTGCACTGCTTCCAACGCCC...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAATCTGTCCTCAGGCAGTaGCTTCTCGATGGAGACGGA +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIESVLRQ*LLDGDG
Trigger: TCCGTCTCCATCGAGAAGGCACTGCCTGAGGACAGA...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGCTGCTAGACATCTaGAAAGAGGGGATAAGTTTA +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDKLLDI*KEGISL
Trigger: TAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTT...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAAGCACAGCTGATATGTaGTCAGGATGGTGGTCACTT +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSSTADM*SGWWSL
Trigger: AAGTGACCACCATCCTGAGCACATATCAGCTGTGCT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTGCTTCCAGTGTGCATaGGGAAACCCTGTTAATCTG +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMCFQCA*GNPVNL
Trigger: CAGATTAACAGGGTTTCCGCATGCACACTGGAAGCA...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGGTTTCCCCTGAGCAGTaGATACCATCCAAATGGGAT +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMVSPEQ*IPSKWD
Trigger: ATCCCATTTGGATGGTATGCACTGCTCAGGGGAAAC...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATGCAGCACAAATTCCCTaGCCCTTGGAGAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYAAQIP*PLESLW
Trigger: CCACAAGCTCTCCAAGGGGCAGGGAATTTGTGCTGC...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAACAGACATTTCACCTTaGTCTGTCCCCTGGCCATCC +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVTDISP*SVPWPS
Trigger: GGATGGCCAGGGGACAGAGCAAGGTGAAATGTCTGT...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAACTCCCACGTCATCTTaGTTGACTCCATGGATTTCC +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSTPTSS*LTPWIS
Trigger: GGAAATCCATGGAGTCAACCAAGATGACGTGGGAGT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATATCACAAATGACCTATTaGCACTGTCCAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGISQMTY*HCPNLG
Trigger: TCCAAGGTTTGGACAGTGCCAATAGGTCATTTGTGA...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACACCTCTCTGGGGGCTaGAGCAGTTCTTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEHLSGG*SSSCFW
Trigger: CCAAAAGCAAGAACTGCTCCAGCCCCCAGAGAGGTG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATGCAAGCCTTTCCACTTaGAGGGTCCAGCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYASLST*RVQLQD
Trigger: GTCCTGTAGCTGGACCCTCCAAGTGGAAAGGCTTGC...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTCATCTCTGGGGCCTTaGTGTTCTCACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYSSLGP*CSHWLE
Trigger: CTCCAGCCAGTGAGAACACCAAGGCCCCAGAGATGA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTACCGGGATTTCATCTCTaGGGCCTTGGTGTTCTCACT +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVPGFHL*GLGVLT
Trigger: AGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGG...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGCCTTCCACGTCTTGTTaGCTGAGTCCCAGATCTCGA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKPSTSC*LSPRSR
Trigger: TCGAGATCTGGGACTCAGCCAACAAGACGTGGAAGG...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAATCAGGCAGCAGGTCCTaGACGTTGAAAGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIESGSRS*TLKEVL
Trigger: CAGCACCTCTTTCAACGTCCAGGACCTGCTGCCTGA...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGAGGACAGTCTTCCAATaGCTCTCACAGCATTGCCCG +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKRTVFQ*LSQHCP
Trigger: CGGGCAATGCTGTGAGAGCCATTGGAAGACTGTCCT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGAATTGCTGGAGTACTaGGAGAAAACCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLELLEY*EKTQFS
Trigger: AGAGAACTGGGTTTTCTCCCAGTACTCCAGCAATTC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCATCCATACACACCCATaGCTATGGAGAACTATCCGG +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSIHTHP*LWRTIR
Trigger: CCGGATAGTTCTCCATAGCCATGGGTGTGTATGGAT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCACTGCACAGAACCTTaGCTGCTGCAAGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLHCTEP*LLQEGT
Trigger: GGTTCCCTCTTGCAGCAGCCAAGGTTCTGTGCAGTG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGAGAAGGTGCCTTCTCTaGCACAGCTGCAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQERRCLL*HSCREF
Trigger: GAACTCTCTGCAGCTGTGCCAGAGAAGGCACCTTCT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCCTTCTCATCATCATCTaGCACCTCCACTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSLLIII*HLHFIL
Trigger: AAGGATGAAGTGGAGGTGTCAGATGATGATGAGAAG...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATAGGATTTCCTGCCACTaGGCCCTGAGATCATTGCCA +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYRISCH*ALRSLP
Trigger: TGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTCTAGTTTTTCTGCATTaGGCGGGCTGGTTGGTGACC +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLLVFLH*AGWLVT
Trigger: GGTCACCAACCAGCCCGCTCAATGCAGAAAAACTAG...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCTAGTTTTTCTGCATTaGGCGGGCTGGTTGGTGACC +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYLVFLH*AGWLVT
Trigger: GGTCACCAACCAGCCCGCTCAATGCAGAAAAACTAG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTATTGACTGGTCATCTTTaGACCAGACAACCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVLTGHL*TRQPRG
Trigger: ACCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAA...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGCGGGACTCCCTGATTaGCTGGTCATCTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEAGLPD*LVIFEP
Trigger: TGGTTCAAAGATGACCAGTCAATCAGGGAGTCCCGC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTGCGGGACTCCCTGATTaGCTGGTCATCTTTGAACCA +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLAGLPD*LVIFEP
Trigger: TGGTTCAAAGATGACCAGTCAATCAGGGAGTCCCGC...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAGAGAAATGGAGAGTTTaGACATCTGCAGTGTACTTT +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIEKWRV*TSAVYF
Trigger: AAAGTACACTGCAGATGTTCAAACTCTCCATTTCTC...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCAGCTCTTTATCAGTTaGAATCTGTTTCATCGTGGC +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLQLFIS*NLFHRG
Trigger: GCCACGATGAAACAGATTTCAACTGATAAAGAGCTG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGGGGCAAGGCATGATTaGTGCACATTTAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLGARHD*CTFKKK
Trigger: TTTCTTCTTAAATGTGCATCAATCATGCCTTGCCCC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACTAAAGACGCAAGTCTaGGTGCATTTACCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSLKTQV*VHLPGL
Trigger: TAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCGGCTGTAAATATAGATaGTGCTTTGCTCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCGCKYR*CFAHLP
Trigger: GGGCAAGTGAGCAAAGCATCATCTATATTTACAGCC...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTTCCCTTTTTCTTGCTTaGGGGCAATTGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLSLFLA*GQLPRL
Trigger: CAGCCTGGGCAATTGCCCTCAAGCAAGAAAAAGGGA...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGAAGATGGTGAGAGATaGAAACTGAACAACTTAACT +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDEDGER*KLNNLT
Trigger: AGTTAAGTTGTTCAGTTTTCATCTCTCACCATCTTC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCCCTGCACAAGTCTATaGTGCAGTGAAGCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLPCTSL*CSEALE
Trigger: CTCCAGAGCTTCACTGCATCATAGACTTGTGCAGGG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAGAGTGCCTGTCACTTTaGCAAACAGCTCCACTGACT +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVECLSL*QTAPLT
Trigger: AGTCAGTGGAGCTGTTTGGCAAAGTGACAGGCACTC...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTATTCTCCACCTTCATGTaGTCGCTTTCCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVFSTFM*SLSWIC
Trigger: GCAGATCCAGGAAAGCGAGCACATGAAGGTGGAGAA...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCTTGAAGAACTTCCCTaGCCAGACTTTTCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLLEELP*PDFSSF
Trigger: AAAACTCGAAAAGTCTGGGCAGGGAAGTTCTTCAAG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAGAAACCCTGTTAATCTaGTCAACCTACCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVETLLI*STYLPP
Trigger: TGGGGGCAGGTAGGTTGAGCAGATTAACAGGGTTTC...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCTGGTGAGCAGTATCTaGACCAGCCTCCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLLVSSI*TSLLHA
Trigger: TGCATGAAGGAGGCTGGTGCAGATACTGCTCACCAG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTGACTCGGCCCTTCTCTaGTCTCCATTCCCTTTATCC +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLDSALL*SPFPLS
Trigger: GGATAAAGGGAATGGAGAGCAGAGAAGGGCCGAGTC...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCATGGGAGGTTACCCTaGCCTCAGGAACAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYHGRLP*PQEQVR
Trigger: TCTTACCTGTTCCTGAGGGCAGGGTAACCTCCCATG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGATGGCTTGTACTCGTTaGATCTCAAACTCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKMACTR*ISNSAG
Trigger: GCCGGCAGAGTTTGAGATGCAACGAGTACAAGCCAT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGTTTGTTGTGGCAACTaGGCCAGTGGGACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEVCCGN*ASGTGK
Trigger: CTTTCCTGTCCCACTGGCCCAGTTGCCACAACAAAC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCATGTCCAAACCTTGGATaGAAAGTTCAGCTGACATCG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSCPNLG*KVQLTS
Trigger: CGATGTCAGCTGAACTTTCCATCCAAGGTTTGGACA...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGAGCAGTTCTTGCTTTTaGCTGCAGCCTCCAGACTGT +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQESSSCF*LQPPDC
Trigger: ACAGTCTGGAGGCTGCAGCCAAAAGCAAGAACTGCT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTAATGCTGAATCCCTCTaGCCCTCCATGGGGATTCTC +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLNAESL*PSMGIL
Trigger: GAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATT...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTCTACTCTTCTTTTCATaGACGGTGACCCAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLLLFFS*TVTQAL
Trigger: CAGCGCCTGGGTCACCGTCCATGAAAAGAAGAGTAG...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACCTTCCACGTCTTGTTaGCTGAGTCCCAGATCTCGA +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEPSTSC*LSPRSR
Trigger: TCGAGATCTGGGACTCAGCCAACAAGACGTGGAAGG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGTTCAGACTCCTGGCTTaGCTCACTGGTTCCATACAC +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKFRLLA*LTGSIH
Trigger: GTGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGAA...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGTGAGTTCAGACTCCTaGCTTGGCTCACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLVSSDS*LGSLVP
Trigger: TGGAACCAGTGAGCCAAGCCAGGAGTCTGAACTCAC...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTGGACCAGCTTAGGGTaGTGGAGGCAGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYWTSLG*WRQFMM
Trigger: CATCATGAACTGCCTCCACCACCCTAAGCTGGTCCA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAGGACAGTCTTCCAATaGCTCTCACAGCATTGCCCG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLRTVFQ*LSQHCP
Trigger: CGGGCAATGCTGTGAGAGCCATTGGAAGACTGTCCT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCCTTGCAGGTGTACTTaGCATCGTCATCCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYPCRCT*HRHPRK
Trigger: TTTGCGGGGATGACGATGCCAAGTACACCTGCAAGG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCTCTGGGCTGAGCTGTaGCCCAGAACTCTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYLWAEL*PRTLVL
Trigger: CAAAACAAGAGTTCTGGGCCACAGCTCAGCCCAGAG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCTCTGGGCTGAGCTGTaGCCCAGAACTCTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLLWAEL*PRTLVL
Trigger: CAAAACAAGAGTTCTGGGCCACAGCTCAGCCCAGAG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTCAGAAATGAATTGCTaGAGTACTGGGAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLSEMNC*STGRKP
Trigger: GGGTTTTCTCCCAGTACTCCAGCAATTCATTTCTGA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAGAGAGTCAGCAAAACTaGCAGGTGGAAGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVESQQN*QVEGER
Trigger: TCTTTCCCCTTCCACCTGCCAGTTTTGCTGACTCTC...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCTACTTACCGGGGGTTaGGGACACCTGCTCTATAAG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLLLTGG*GHLLYK
Trigger: CTTATAGAGCAGGTGTCCCCAACCCCCGGTAAGTAG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAAAGACAGTTTTTCCATaGACCAGGAGAGGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVKTVFP*TRRGGG
Trigger: ACCACCCCCTCTCCTGGTCCATGGAAAAACTGTCTT...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTACTAGGACTAGTCACATaGCCCCATCTAACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVLGLVT*PHLTRK
Trigger: CTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAG...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGACACACCCATGGCTATaGAGAACTATCCGGATAGTT +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMTHPWL*RTIRIV
Trigger: AACTATCCGGATAGTTCTCCATAGCCATGGGTGTGT...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGATATGTGCTCAGGATaGTGGTCACTTAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSDMCSG*WSLKLH
Trigger: GTGGAGTTTAAGTGACCACCATCCTGAGCACATATC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGAAGCAGCTGTTCCCTaGAACAAGGACCTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLEAAVP*NKDLLR
Trigger: TCTCAGGAGGTCCTTGTTCCAGGGAACAGCTGCTTC...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAATAGACACGAGGGTTaGACTCAGGCGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLNRHEG*TQALSL
Trigger: CAGGGACAACGCCTGAGTCCAACCCTCGTGTCTATT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATAATAGACACGAGGGTTaGACTCAGGCGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYNRHEG*TQALSL
Trigger: CAGGGACAACGCCTGAGTCCAACCCTCGTGTCTATT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGTTGGAAACAACAGGCTaGCCAAGCTGCTTCGCAAAA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKLETTG*PSCFAK
Trigger: TTTTGCGAAGCAGCTTGGTCAGCCTGTTGTTTCCAA...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCAGTTTGATTTTCCTTaGCCTCCTGGCTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYQFDFP*PPGFGA
Trigger: AGCCCCAAAGCCAGGAGGTCAAGGAAAATCAAACTG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACAGTTTGATTTTCCTTaGCCTCCTGGCTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEQFDFP*PPGFGA
Trigger: AGCCCCAAAGCCAGGAGGTCAAGGAAAATCAAACTG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCGATCTCCAGGACCATaGCGATGTTGGCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLRSPGP*RCWPFL
Trigger: AAGAAAAGGCCAACATCGTCATGGTCCTGGAGATCG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTTGACTGGTCATCTTTaGACCAGACAACCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYLTGHL*TRQPRG
Trigger: ACCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTGGCCTTATTTTTCATaGGCGCATTCAAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMWPYFS*AHSSGE
Trigger: TTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCA...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCTGGCCTTATTTTTCATaGGCGCATTCAAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSWPYFS*AHSSGE
Trigger: TTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCA...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGAACTGCTTTCAGAAATaGATTGCTGGAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMNCFQK*IAGVLG
Trigger: TCCCAGTACTCCAGCAATTCATTTCTGAAAGCAGTT...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAAACTGCTTTCAGAAATaGATTGCTGGAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSNCFQK*IAGVLG
Trigger: TCCCAGTACTCCAGCAATTCATTTCTGAAAGCAGTT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCCACACGTTCAGAGCTaGTATTCTATAACAGCACAA +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMPHVQS*YSITAQ
Trigger: TTGTGCTGTTATAGAATATCAGCTCTGAACGTGTGG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACCACACGTTCAGAGCTaGTATTCTATAACAGCACAA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSPHVQS*YSITAQ
Trigger: TTGTGCTGTTATAGAATATCAGCTCTGAACGTGTGG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTGTTTGAACATCTaGAGACATGGGGAACTTGCC +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMYCLNI*RHGELA
Trigger: GGCAAGTTCCCCATGTCTTCAGATGTTCAAACAATA...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTTTATCAAAAACAGGTaGGGTGTGGAGCAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLFIKNR*GVEQKA
Trigger: TGCTTTTTGCTCCACACCTCACCTGTTTTTGATAAA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCACTTTGCTTCTCAGTaGCTAGACTTGGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEHFASQ*LDLGEE
Trigger: TTCCTCTCCCAAGTCTAGTCACTGAGAAGCAAAGTG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCCTGGCTTTGGGGCTTaGTCTCAAATTTGGGGAATG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLPGFGA*SQIWGM
Trigger: CATTCCCCAAATTTGAGAGCAAGCCCCAAAGCCAGG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTCCATACACGTTGATTaGACGTACACGGAACTTATA +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLSIHVD*TYTELI
Trigger: TATAAGTTCCGTGTACGTGCAATCAACGTGTATGGA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACCACAAATTCTGGGGTaGCAAAGAGGACCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEPQILG*QRGPSE
Trigger: CTCTGAAGGTCCTCTTTGGCACCCCAGAATTTGTGG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTGGCTCTCACAGCATTaGCCGTTTTCTGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYWLSQH*PFSAIS
Trigger: GGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGGATGCTTTGCTCACTTaGCCACTGCTAACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKDALLT*PLLTSL
Trigger: TAAGGAGGTTAGCAGTGGGCAAGTGAGCAAAGCATC...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAGTTTATACATCTTGGTaGGTGTTACATCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIVYTSW*VLHPFM
Trigger: CATGAAAGGATGTAACACGCACCAAGATGTATAAAC...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAAGAATAACAAGAAGGTaGCTTCTCTGGCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVRITRR*LLWHSC
Trigger: GCAGCTGTGCCAGAGAAGGCACCTTCTTGTTATTCT...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTTCTGCTCAACCTACCTaGCCCCATTGCTACACCTTT +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLSAQPT*PHCYTF
Trigger: AAAGGTGTAGCAATGGGGGCAGGTAGGTTGAGCAGA...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGATCCTTGCTGCAGACTaGTCTCATGCACTTTGGACA +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEILAAD*SHALWT
Trigger: TGTCCAAAGTGCATGAGAGCAGTCTGCAGCAAGGAT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATAACCCAACCTTGCTCTaGTCAGCACTGTCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYNPTLL*SALSVC
Trigger: ACACACTGACAGTGCTGAGCAGAGCAAGGTTGGGTT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTCAGCTGGCCCGAATTaGTTTCTGTTAATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLSAGPN*FLLILK
Trigger: CTTCAAAATTAACAGAAACCAATTCGGGCCAGCTGA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCTCACAAATGACCTATTaGCACTGTCCAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCSQMTY*HCPNLG
Trigger: TCCAAGGTTTGGACAGTGCCAATAGGTCATTTGTGA...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATGGCCACTTCAGGCTTTaGAATCCCGGAAACTTCACA +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYGHFRL*NPGNFT
Trigger: TGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCC...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTGCAGCACAAAATCCTaGCCCTCAATAACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYCSTKS*PSITAQ
Trigger: CTGCGCTGTTATTGAGGGCCAGGATTTTGTGCTGCA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTCAGAGTGAGCCTTCCTaGGAGAGGATGATGAACTTG +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLQSEPS*ERMMNL
Trigger: CAAGTTCATCATCCTCTCCCAGGAAGGCTCACTCTG...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGGGCCAGCGTCATTCTTaGCTACACACTTGTATAAGC +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKGQRHS*LHTCIS
Trigger: GCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCC...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTCCTTCGGAGGTGTCTTaGGGGCAGGTTTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLPSEVS*GQVSFS
Trigger: TGAAAAAGAAACCTGCCCCCAAGACACCTCCGAAGG...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGATGTGCTCGCTTTCCTaGATCTGCTTTCGGAACTTC +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEMCSLS*ICFRNF
Trigger: GAAGTTCCGAAAGCAGATCCAGGAAAGCGAGCACAT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTACCAGCTTAGGGTGGTaGAGGCAGTTCATGATGCTA +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLTSLGW*RQFMML
Trigger: TAGCATCATGAACTGCCTCCACCACCCTAAGCTGGT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAGGAGCCACAAATTCTaGGGTGCCAAAGAGGACCTT +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLRSHKF*GAKEDL
Trigger: AAGGTCCTCTTTGGCACCCCAGAATTTGTGGCTCCT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATTACTTTGGAATAAAGTaGCTCAACTGCTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDYFGIK*LNCFQK
Trigger: TTTCTGAAAGCAGTTGAGCCACTTTATTCCAAAGTA...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGATCTGCAGTGTACTTTaGAATAAAGTGGCTCAACTG +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLICSVL*NKVAQL
Trigger: CAGTTGAGCCACTTTATTCCAAAGTACACTGCAGAT...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGATTCCAAAGTACATaGAGTTCTCCAGCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIRFQST*SSPALY
Trigger: ATAAAGAGCTGGAGAACTCCATGTACTTTGGAATCT...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTCTAGGACTAGTCACATaGCCCCATCTAACCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLLGLVT*PHLTRK
Trigger: CTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAG...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAATGGGCCTCAGTAGCCTaGGAGCAGAAGATTCTAATC +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEWASVA*EQKILI
Trigger: GATTAGAATCTTCTGCTCCCAGGCTACTGAGGCCCA...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGTCACACTGTATGGTGTaGGTATGTTTCTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKSHCMV*VCFWPL
Trigger: CAGAGGCCAGAAACATACCCACACCATACAGTGTGA...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCTCTTCATAGGCAAATaGCTTGTACTCGTTGCATCT +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMLFIGK*LVLVAS
Trigger: AGATGCAACGAGTACAAGCCATTTGCCTATGAAGAG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGGTTCAGAGAATGGAATaGGGCCTGGAACTGATGTGT +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEVQRME*GLELMC
Trigger: ACACATCAGTTCCAGGCCCCATTCCATTCTCTGAAC...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAATCCTCATGGACAGCATaGATCACAAGGCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIESSWTA*ITRLKV
Trigger: GACTTTCAGCCTTGTGATTCATGCTGTCCATGAGGA...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTTTGGAAACAACAGGCTaGCCAAGCTGCTTCGCAAAA +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLLETTG*PSCFAK
Trigger: TTTTGCGAAGCAGCTTGGTCAGCCTGTTGTTTCCAA...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTGGTCACCTCTTTCCTaGCATCTGAATTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYWSPLS*HLNWWL
Trigger: AAGCCACCAATTCAGATGTCAGGAAAGAGGTGACCA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAATGGTTCCATACACGTTaGTTGCACGTACACGGAACT +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEWFHTR*LHVHGT
Trigger: AGTTCCGTGTACGTGCAATCAACGTGTATGGAACCA...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGAGAAATGGAGAGTTTaGACATCTGCAGTGTACTTT +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSEKWRV*TSAVYF
Trigger: AAAGTACACTGCAGATGTTCAAACTCTCCATTTCTC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR TCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTAGCATCTTGAGGACCTaGTACTCTGTAACAGTGGTC +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLSILRT*YSVTVV
Trigger: GACCACTGTTACAGAGTATCAGGTCCTCAAGATGCT...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGATCCACAATATTGTTTaGACATCTGAAGACATGGGG +
Preference number: 4 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMIHNIV*TSEDMG
Trigger: CCCCATGTCTTCAGATGTTCAAACAATATTGTGGAT...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTTTTCTGAGGCAACTGTaGTTTAGTCACCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLFLRQL*FSHLVW
Trigger: CCACACCAGGTGACTAAATCACAGTTGCCTCAGAAA...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACTACCTAAGGGCCTCTaGTGTCTAGTCTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIELPKGL*CLVFCF
Trigger: GAAGCAAAAGACTAGACATCAGAGGCCCTTAGGTAG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATAACACAGCATCCTGTTaGCCTTGGGCAAGTCACTTA +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYNTASC*PWASHL
Trigger: TAAGTGACTTGCCCAAGGTCAACAGGATGCTGTGTT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTTGGATTTCCAGAACCTaGATGCCGTTCTTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLWISRT*MPFFSD
Trigger: GTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCA...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCATCCATACACGTTGATTaGACGTACACGGAACTTATA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSSIHVD*TYTELI
Trigger: TATAAGTTCCGTGTACGTGCAATCAACGTGTATGGA...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCATGATGCTAATCTCCTaGCGGATATTCTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSMMLIS*RIFSFS
Trigger: AGAGAAAGAGAATATCCGGCAGGAGATTAGCATCAT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGCTGCCATTTCCTTCTTaGCATGTACTTCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKLPFPS*HVLLHP
Trigger: CGGATGAAGAAGTACATGGCAAGAAGGAAATGGCAG...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACTGCCAATAATGAACTaGACCAAAGTCACCAATTCA +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSLPIMN*TKVTNS
Trigger: TGAATTGGTGACTTTGGTGCAGTTCATTATTGGCAG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAAAGACATGGGGAACTTaGCATCTGATATCTGATAAC +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSKTWGT*HLISDN
Trigger: GTTATCAGATATCAGATGGCAAGTTCCCCATGTCTT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGACCAGTGTTCCAGTTaGCTCCAACACAGTGATTTC +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEDQCSS*LQHSDF
Trigger: GAAATCACTGTGTTGGAGGCAACTGGAACACTGGTC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGGCCAAGAATACTCCGTaGTATACTGAGTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEAKNTP*YTESSV
Trigger: AACACTGGACTCAGTATAGCACGGAGTATTCTTGGC...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACTGACAATTGGTTGTTaGTTTACTGACCAAAGACCT +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSLTIGC*FTDQRP
Trigger: AGGTCTTTGGTCAGTAAAGCAACAACCAATTGTCAG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTCGTGGCAACCTTTCATaGTCTTCTGGGAGATGTTAC +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLRGNLS*SSGRCY
Trigger: GTAACATCTCCCAGAAGAGCATGAAAGGTTGCCACG...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCACCACTGCCATTGGTaGCTTCACAGGTATACTTTC +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLHHCHW*LHRYTF
Trigger: GAAAGTATACCTGTGAAGCCACCAATGGCAGTGGTG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTATCTTGGTTGACTCCATaGATTTCCAGAACCTGCATG +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVSWLTP*ISRTCM
Trigger: CATGCAGGTTCTGGAAATCCATGGAGTCAACCAAGA...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTACTCCCACGTCATCTTaGTTGACTCCATGGATTTCC +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLTPTSS*LTPWIS
Trigger: GGAAATCCATGGAGTCAACCAAGATGACGTGGGAGT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGGACTCCCTGATTGACTaGTCATCTTTGAACCAGACA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKDSLID*SSLNQT
Trigger: TGTCTGGTTCAAAGATGACCAGTCAATCAGGGAGTC...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGGACTCCCTGATTGACTaGTCATCTTTGAACCAGACA +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEDSLID*SSLNQT
Trigger: TGTCTGGTTCAAAGATGACCAGTCAATCAGGGAGTC...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAATGAGCGCATTCAAGTaGAGAATTTATGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSMSAFK*RIYDFA
Trigger: GGCAAAGTCATAAATTCTCCACTTGAATGCGCTCAT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCATGAGCGCATTCAAGTaGAGAATTTATGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSMSAFK*RIYDFA
Trigger: GGCAAAGTCATAAATTCTCCACTTGAATGCGCTCAT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCATCTGCAGTGTACTTTaGAATAAAGTGGCTCAACTG +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCICSVL*NKVAQL
Trigger: CAGTTGAGCCACTTTATTCCAAAGTACACTGCAGAT...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAATCTGCAGTGTACTTTaGAATAAAGTGGCTCAACTG +
Preference number: 4 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSICSVL*NKVAQL
Trigger: CAGTTGAGCCACTTTATTCCAAAGTACACTGCAGAT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCAAACTCTGGCTATCTTaGAGGAGATTCCAAAGTACA +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSKLWLS*RRFQST
Trigger: TGTACTTTGGAATCTCCTCCAAGATAGCCAGAGTTT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGTGCTCTCATGCACTTTaGACAGACATTTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQECSHAL*TDISPC
Trigger: GCAAGGTGAAATGTCTGTCCAAAGTGCATGAGAGCA...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCTCTTTCCTGACATCTaGATTGGTGGCTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQELFPDI*IGGFCF
Trigger: GAAACAAAAGCCACCAATTCAGATGTCAGGAAAGAG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCCTTTTTGTTCAGTATTaGTTGTCACTGTCCGGTAAT +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCLFVQY*LSLSGN
Trigger: ATTACCGGACAGTGACAATCAATACTGAACAAAAAG...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGTGGCCTTATTTTTCATaGGCGCATTCAAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEWPYFS*AHSSGE
Trigger: TTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCA...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGTGGCCTTATTTTTCATaGGCGCATTCAAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKWPYFS*AHSSGE
Trigger: TTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCA...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGAACTGCTTTCAGAAATaGATTGCTGGAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQENCFQK*IAGVLG
Trigger: TCCCAGTACTCCAGCAATTCATTTCTGAAAGCAGTT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAGGGGCAAGGCATGATTaGTGCACATTTAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVGARHD*CTFKKK
Trigger: TTTCTTCTTAAATGTGCATCAATCATGCCTTGCCCC...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACTAAAGACGCAAGTCTaGGTGCATTTACCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIELKTQV*VHLPGL
Trigger: TAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCTAAAGACGCAAGTCTaGGTGCATTTACCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYLKTQV*VHLPGL
Trigger: TAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGGCTGTAAATATAGATaGTGCTTTGCTCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEGCKYR*CFAHLP
Trigger: GGGCAAGTGAGCAAAGCATCATCTATATTTACAGCC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTTGCCTCCAACACAGTaGTTTCCCTTTTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYLPPTQ*FPFSLP
Trigger: TGGCAAAGAAAAGGGAAATCACTGTGTTGGAGGCAA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTCTTCATAAACCTCAATaGTGCCTTCCTGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLLHKPQ*CLPVSS
Trigger: TGAGGAGACAGGAAGGCAGCATTGAGGTTTATGAAG...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGAGAGTTTGAACATCTaGAGTGTACTTTGGAATAAA +
Preference number: 4 (lower is better)
Translates to: CLKLLDICKEGISLDFLLESLNI*SVLWNK
Trigger: TTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR GCA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGATTTCCCTTTTCTTTaGCACCCAGGCAAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SSSLESVENEDVLNSGYLDFPFL*HPGKVS
Trigger: TGAGACTTTGCCTGGGTGGCAAAGAAAAGGGAAATC...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAATGCAGACTGCTCTCATaGACTTTGGACAGACATTTC +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIECRLLS*TLDRHF
Trigger: GAAATGTCTGTCCAAAGTGCATGAGAGCAGTCTGCA...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAATTGCATCTCAAACTCTaGCGGCAAAGCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIELHLKL*RQSHFP
Trigger: AGGAAAATGGCTTTGCCGGCAGAGTTTGAGATGCAA...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCAGATGTATTAAACTCTaGCTATCTTGGAGGAGATTC +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCRCIKL*LSWRRF
Trigger: GAATCTCCTCCAAGATAGCCAGAGTTTAATACATCT...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACAGGGACCACTTTCATaGAAGACAGTTTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEQGPLS*KTVFPW
Trigger: CCATGGAAAAACTGTCTTCCATGAAAGTGGTCCCTG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCTTCAATATGAAGGTATaGATAAAGCATTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSFNMKV*IKHLAA
Trigger: GGCAGCCAAATGCTTTATCCATACCTTCATATTGAA...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGGAACATCTGAAGACATaGGGAACTTGCCATCTGATA +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEEHLKT*GTCHLI
Trigger: TATCAGATGGCAAGTTCCCCATGTCTTCAGATGTTC...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAATGTGCTCAGGATGGTaGTCACTTAAACTCCACACT +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEMCSGW*SLKLHT
Trigger: AGTGTGGAGTTTAAGTGACCACCATCCTGAGCACAT...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCCTTTCATGCTCTTCTaGGAGATGTTACTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEPFMLF*EMLLVQ
Trigger: TTGAACCAGTAACATCTCCCAGAAGAGCATGAAAGG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAGGTGATTTCCCTAAATaGAATCTAGCTGCACTAGTA +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVGDFPK*NLAALV
Trigger: TACTAGTGCAGCTAGATTTCATTTAGGGAAATCACC...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCCACACGTTCAGAGCTaGTATTCTATAACAGCACAA +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYPHVQS*YSITAQ
Trigger: TTGTGCTGTTATAGAATATCAGCTCTGAACGTGTGG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACAGCTCTTTATCAGTTaGAATCTGTTTCATCGTGGC +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEQLFIS*NLFHRG
Trigger: GCCACGATGAAACAGATTTCAACTGATAAAGAGCTG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGGGGCAAGGCATGATTaGTGCACATTTAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEGARHD*CTFKKK
Trigger: TTTCTTCTTAAATGTGCATCAATCATGCCTTGCCCC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTATTTATCAAAAACAGGTaGGGTGTGGAGCAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVFIKNR*GVEQKA
Trigger: TGCTTTTTGCTCCACACCTCACCTGTTTTTGATAAA...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCTTGAAGAACTTCCCTaGCCAGACTTTTCGAGTTTT +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLLEELP*PDFSSF
Trigger: AAAACTCGAAAAGTCTGGGCAGGGAAGTTCTTCAAG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCGAGAGTTTGAACATCTaGAGTGTACTTTGGAATAAA +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCESLNI*SVLWNK
Trigger: TTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR GCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGAAGCTGCTAGACATCTaGAAAGAGGGGATAAGTTTA +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKKLLDI*KEGISL
Trigger: TAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR GCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGACCCTTTTCATACAGTaGTTCAACTCCCATAAAAGG +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKTLFIQ*FNSHKR
Trigger: CCTTTTATGGGAGTTGAAGCACTGTATGAAAAGGGT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCTACTTTGGAATAAAGTaGCTCAACTGCTTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCYFGIK*LNCFQK
Trigger: TTTCTGAAAGCAGTTGAGCCACTTTATTCCAAAGTA...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGGTAGGTCAAGTTCTTTaGAGAGTGTTGAGAATGAAG +
Preference number: 4 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKVGQVL*RVLRMK
Trigger: CTTCATTCTCAACACTCTCCAAAGAACTTGACCTAC...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATGAGAGGGGGTGGTTTTaGGATTATTCAAGCACATTA +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYERGWF*DYSSTL
Trigger: TAATGTGCTTGAATAATCCCAAAACCACCCCCTCTC...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGAACATCTGAAGACATaGGGAACTTGCCATCTGATA +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEEHLKT*GTCHLI
Trigger: TATCAGATGGCAAGTTCCCCATGTCTTCAGATGTTC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAGGTGATTTCCCTAAATaGAATCTAGCTGCACTAGTA +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEGDFPK*NLAALV
Trigger: TACTAGTGCAGCTAGATTTCATTTAGGGAAATCACC...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTTGGTTGTTGCTTTACTaGCCAAAGACCTTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLWLLLY*PKTFGN
Trigger: ATTTCCAAAGGTCTTTGGTCAGTAAAGCAACAACCA...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTTCAGCTGGCCCGAATTaGTTTCTGTTAATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLSAGPN*FLLILK
Trigger: CTTCAAAATTAACAGAAACCAATTCGGGCCAGCTGA...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTATGAGCGCATTCAAGTaGAGAATTTATGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLMSAFK*RIYDFA
Trigger: GGCAAAGTCATAAATTCTCCACTTGAATGCGCTCAT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATAAACTCTGGCTATCTTaGAGGAGATTCCAAAGTACA +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYKLWLS*RRFQST
Trigger: TGTACTTTGGAATCTCCTCCAAGATAGCCAGAGTTT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTATTCAATATGAAGGTATaGATAAAGCATTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVFNMKV*IKHLAA
Trigger: GGCAGCCAAATGCTTTATCCATACCTTCATATTGAA...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCTTTTTGTTCAGTATTaGTTGTCACTGTCCGGTAAT +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLLFVQY*LSLSGN
Trigger: ATTACCGGACAGTGACAATCAATACTGAACAAAAAG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR TCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTTTATGCCTTTGAGCTaGCAATTGGTTGTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYFMPLS*QLVVAL
Trigger: TAAAGCAACAACCAATTGTCAGCTCAAAGGCATAAA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTTCAGTTCACTTCACATaGTCAAGTACTTCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLSVHFT*SSTSVK
Trigger: CTTTACTGAAGTACTTGAGCATGTGAAGTGAACTGA...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAAATATATTTAAAGGTTaGGGGCAAGGCATGATTGAT +
Preference number: 4 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVNIFKG*GQGMID
Trigger: ATCAATCATGCCTTGCCCCCAACCTTTAAATATATT...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGATAGTTTATACATCTTaGTGCGTGTTACATCCTTTC +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEIVYTS*CVLHPF
Trigger: GAAAGGATGTAACACGCACCAAGATGTATAAACTAT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CCA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGTCTACAGAACGACTCTaGTTTATATCCATAAATGTG +
Preference number: 4 (lower is better)
Translates to: DYSCSVLIYHSDGIINQESTERL*FISINV
Trigger: CACATTTATGGATATAAACCAGAGTCGTTCTGTAGA...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR GCA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTGAGAGTTTGAACATCTaGAGTGTACTTTGGAATAAA +
Preference number: 4 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLESLNI*SVLWNK
Trigger: TTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATAATATATTTAAAGGTTaGGGGCAAGGCATGATTGAT +
Preference number: 4 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYNIFKG*GQGMID
Trigger: ATCAATCATGCCTTGCCCCCAACCTTTAAATATATT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CCA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAAAAGTGAATAACTTCTaGGTGCTAAGGAAACATACA +
Preference number: 4 (lower is better)
Translates to: THNIHAHKGYILNTKVIEKVNNF*VLRKHT
Trigger: TGTATGTTTCCTTAGCACCCAGAAGTTATTCACTTT...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS GCA 90 bp GGCTGGAGCATCTCCTCTAGGAAGTCTCCCACACGGACCTCGCTCTaGTCCCTCCTCCTCACGGCTGACCCTGCTGGGTCGTCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GWSISSRKSPTRTSL*SLLLTADPAGSSCQ
Trigger: CTGGCAGGACGACCCAGCAGGGTCAGCCGTGAGGAGGAGGGAGCAGAGCGAGGTCCGTGTGGGAGACTTCCTAGAGGAGATGCTCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508240.1
CDS CCA 90 bp CCACCACCGTACTGCAGAGGTTCCTGTCCAAGGTCCAGCCAAGAATaGAGACCGAAGGAGTGCCGGGCGCCACAGAGCCCAGGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: PPPYCRGSCPRSSQE*RPKECRAPQSPGPD
Trigger: GTCTGGCCCTGGGCTCTGTGGCGCCCGGCACTCCTTCGGTCTCCATTCTTGGCTGGACCTTGGACAGGAACCTCTGCAGTACGGTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGGAGGAAGAGAGCTCTaGGGCCTCCGGGATTTCATC +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPGGREL*GLRDFI
Trigger: GATGAAATCCCGGAGGCCCAAGAGCTCTCTTCCTCC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS GCA 90 bp CCCAGCAGGCAGATAAGCAGCCTGGGGAAGATGGTGCCGGCTGAGTaGTTTGTCCCGGGTGCCTGGCTCCCAACTGGCCTCAGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: PSRQISSLGKMVPAE*FVPGAWLPTGLSLK
Trigger: CTTCAGACTGAGGCCAGTTGGGAGCCAGGCACCCGGGACAAAGCACTCAGCCGGCACCATCTTCCCCAGGCTGCTTATCTGCCTGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS GCA 90 bp GGCAGTAGGGGAGACACGTTTGGGGGCTCCCTGTGGTGCCCACGCTaGTGGCAGTGGGCCACTCACATCTCCAGGACCATGACGATGTTG +
Preference number: 5 (lower is better)
Translates to: GSRGDTFGGSLWCPR*WQWATHISRTMTML
Trigger: CAACATCGTCATGGTCCTGGAGATGTGAGTGGCCCACTGCCAGCAGCGTGGGCACCACAGGGAGCCCCCAAACGTGTCTCCCCTACTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS CCA 90 bp AGTAGGGGAGACACGTTTGGGGGCTCCCTGTGGTGCCCACGCTGCTaGCAGTGGGCCACTCACATCTCCAGGACCATGACGATGTTGGCC +
Preference number: 5 (lower is better)
Translates to: SRGDTFGGSLWCPRC*QWATHISRTMTMLA
Trigger: GGCCAACATCGTCATGGTCCTGGAGATGTGAGTGGCCCACTGCCAGCAGCGTGGGCACCACAGGGAGCCCCCAAACGTGTCTCCCCTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS GCA 90 bp TGCCAGCTCCTGATCGTACAGACATTGGCCTGCCATTCACCAGGCTaGGGCCACACTGGCGTCCTTCTGGGTCCCCATGGGCCCATCTCT +
Preference number: 5 (lower is better)
Translates to: CQLLIVQTLACHSPG*GHTGVLLGPHGPIS
Trigger: AGAGATGGGCCCATGGGGACCCAGAAGGACGCCAGTGTGGCCGCAGCCTGGTGAATGGCAGGCCAATGTCTGTACGATCAGGAGCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CCA 90 bp GCAACTGGGCCAGTGGGACAGGAAAGGCGTCCTGAAGCTCTCGGCTaGGAAGCTCCTGAAGTTGCTCTGAACTGCAGCAGAGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: ATGPVGQERRPEALG*EAPEVALNCSRGSR
Trigger: CCGGCTGCCTCTGCTGCAGTTCAGAGCAACTTCAGGAGCTTCCCAGCCGAGAGCTTCAGGACGCCTTTCCTGTCCCACTGGCCCAGTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000464489.5
CDS-3UTR CAA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCAATCATCCACGGTGACTaGGCAGGAGCACTCCGCCTG +
Preference number: 5 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPIIHGD*AGALRL
Trigger: CAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTTCCACGACAGTGAGGTaGACCTGGGCCTGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPSTTVR*TWACLL
Trigger: CAGCAGGCAGGCCCAGGTCAACCTCACTGTCGTGGA...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGTTCAGACTCCTGGCTaGGCTCACTGGTTCCATACA +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPVQTPG*AHWFHT
Trigger: TGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGAAC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGTGGCTGAGGTAACGTaGGCCAAGGTTTCGTTATCG +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPVAEVT*AKVSLS
Trigger: CGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360304.8
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAAGACTGTTGACAGCCTaGCAGGTGTACTTGGCATCG +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPRLLTA*QVYLAS
Trigger: CGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCT...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS TCA 90 bp GTGGGTATGTTTCTGGCCTCTGCCACCACAGTGAGGCTGGGTCGCTaGACAGAATCCACGCAGCCCCAGGTGGAGGTGATGAGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: VGMFLASATTVRLGR*TESTQPQVEVMRRG
Trigger: TCCCCTCCTCATCACCTCCACCTGGGGCTGCGTGGATTCTGTTCAGCGACCCAGCCTCACTGTGGTGGCAGAGGCCAGAAACATACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS TCA 90 bp TATTCCCAGCAGGCAGATAAGCAGCCTGGGGAAGATGGTGCCGGCTaGGTGCTTTGTCCCGGGTGCCTGGCTCCCAACTGGCCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: YSQQADKQPGEDGAG*VLCPGCLAPNWPQS
Trigger: AGACTGAGGCCAGTTGGGAGCCAGGCACCCGGGACAAAGCACTCAGCCGGCACCATCTTCCCCAGGCTGCTTATCTGCCTGCTGGGAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 90 bp GTATCTGCACCAGCCTCCTTCATGCAGCACAAATTCCCTGCCCCTTaGAGAGCTTGTGGGGCCAGCCATCCTGGCTTGCCCAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: VSAPASFMQHKFPAP*RACGASHPGLPRQA
Trigger: AGCCTGCCTGGGCAAGCCAGGATGGCTGGCCCCACAAGCTCTCCAAGGGGCAGGGAATTTGTGCTGCATGAAGGAGGCTGGTGCAGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 90 bp GGAGACACGTTTGGGGGCTCCCTGTGGTGCCCACGCTGCTGGCAGTaGGCCACTCACATCTCCAGGACCATGACGATGTTGGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: GDTFGGSLWCPRCWQ*ATHISRTMTMLAFS
Trigger: AGAAAAGGCCAACATCGTCATGGTCCTGGAGATGTGAGTGGCCCACTGCCAGCAGCGTGGGCACCACAGGGAGCCCCCAAACGTGTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS CCA 90 bp CGCCGAGCCTCACACACAGGAAAGAGGCTCCTGCTGGGTCTGGGCTaGATGAGTGAACAGATTCCGCCCTGGAATGAGGAAGGCGGCCTT +
Preference number: 5 (lower is better)
Translates to: RRASHTGKRLLLGLG*MSEQIPPWNEEGGL
Trigger: AAGGCCGCCTTCCTCATTCCAGGGCGGAATCTGTTCACTCATCCAGCCCAGACCCAGCAGGAGCCTCTTTCCTGTGTGTGAGGCTCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CCA 90 bp GATCGTACAGACATTGGCCTGCCATTCACCAGGCTGCGGCCACACTaGCGTCCTTCTGGGTCCCCATGGGCCCATCTCTTGGTTCACAGC +
Preference number: 5 (lower is better)
Translates to: DRTDIGLPFTRLRPH*RPSGSPWAHLLVHS
Trigger: GCTGTGAACCAAGAGATGGGCCCATGGGGACCCAGAAGGACGCCAGTGTGGCCGCAGCCTGGTGAATGGCAGGCCAATGTCTGTACGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS-3UTR CAA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGGCCGGCCAGTGATCTaGCAGGAGAATCGTCCCATC +
Preference number: 5 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPGRPVI*QENRPI
Trigger: GATGGGACGATTCTCCTGCAAGATCACTGGCCGGCC...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAGCAGCCCCAGCTTGGACTCCCTaGGGGGCTGAGGCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: LGNAESLWPSMGILLLAAPAWTP*GAEAGC
Trigger: ACAGCCAGCCTCAGCCCCCAAGGGAGTCCAAGCTGG...GGCTGCTAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGGGAGGAAGAGAGCTCTaGGGCCTCCGGGATTTCATC +
Preference number: 5 (lower is better)
Translates to: CSGTFPLSQVTCGWGRPVGGREL*GLRDFI
Trigger: GATGAAATCCCGGAGGCCCAAGAGCTCTCTTCCTCC...CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCAGCCAGGATGGTGAGCTaGCTGCCATTCTCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPARMVS*LPFSLF
Trigger: GAACAGCGAGAATGGCAGCAAGCTCACCATCCTGGC...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTTCCACGACAGTGAGGTaGACCTGGGCCTGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GWLETQMAAAATISCVARSTTVR*TWACLL
Trigger: CAGCAGGCAGGCCCAGGTCAACCTCACTGTCGTGGA...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATCTAGTTTTTCTGCATaGAGCGGGCTGGTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPSSFSA*SGLVGD
Trigger: GTCACCAACCAGCCCGCTCAATGCAGAAAAACTAGA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS GCA 90 bp CTGTCCAGCCAAGCCCAGCCGGAATGGGTCCGGCTCCCACCTCTGTaGCTTCTCCTCCACCTGTGCAGTCCTCTTCTCTGTATTCTGACT +
Preference number: 5 (lower is better)
Translates to: LSSQAQPEWVRLPPL*LLLHLCSPLLCILT
Trigger: AGTCAGAATACAGAGAAGAGGACTGCACAGGTGGAGGAGAAGGCACAGAGGTGGGAGCCGGACCCATTCCGGCTGGGCTTGGCTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS GCA 90 bp AGTCTCAATGCCCCTGGGTCCCTTGAGTATCCAGCTAAAAGACTCTaGTCCTGTCCAGCCAAGCCCAGCCGGAATGGGTCCGGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: SLNAPGSLEYPAKRL*SCPAKPSRNGSGSH
Trigger: GTGGGAGCCGGACCCATTCCGGCTGGGCTTGGCTGGACAGGAGCAGAGTCTTTTAGCTGGATACTCAAGGGACCCAGGGGCATTGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS GCA 90 bp GTGAGCAGTATCTGCACCAGCCTCCTTCATGCAGCACAAATTCCCTaGCCCTTGGAGAGCTTGTGGGGCCAGCCATCCTGGCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VSSICTSLLHAAQIP*PLESLWGQPSWLAQ
Trigger: CTGGGCAAGCCAGGATGGCTGGCCCCACAAGCTCTCCAAGGGGCAGGGAATTTGTGCTGCATGAAGGAGGCTGGTGCAGATACTGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp GGTTCCTGTGTCGCTGGTGAGCAGTATCTGCACCAGCCTCCTTCATaGAGCACAAATTCCCTGCCCCTTGGAGAGCTTGTGGGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GSCVAGEQYLHQPPS*STNSLPLGELVGPA
Trigger: GGCTGGCCCCACAAGCTCTCCAAGGGGCAGGGAATTTGTGCTGCATGAAGGAGGCTGGTGCAGATACTGCTCACCAGCGACACAGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp ATACACACACAGGTGCGCAGTGAACAAGCAGCTCCTCTAGGAGGGTaGGGCACCAGGCAGGGATCGTTCTGCACTAGCCGTCCACTGGTC +
Preference number: 5 (lower is better)
Translates to: IHTQVRSEQAAPLGG*GTRQGSFCTSRPLV
Trigger: GACCAGTGGACGGCTAGTGCAGAACGATCCCTGCCTGGTGCCGCACCCTCCTAGAGGAGCTGCTTGTTCACTGCGCACCTGTGTGTGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS CCA 90 bp AGCCTCCTTCATGCAGCACAAATTCCCTGCCCCTTGGAGAGCTTGTaGGGCCAGCCATCCTGGCTTGCCCAGGCAGGCTTGTGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SLLHAAQIPCPLESL*GQPSWLAQAGLWSF
Trigger: GAAACTCCACAAGCCTGCCTGGGCAAGCCAGGATGGCTGGCCCCACAAGCTCTCCAAGGGGCAGGGAATTTGTGCTGCATGAAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 90 bp AGCCTGGGGAAGATGGTGCCGGCTGAGTGCTTTGTCCCGGGTGCCTaGCTCCCAACTGGCCTCAGTCTGAAGTCACAATGCATGCACTCT +
Preference number: 5 (lower is better)
Translates to: SLGKMVPAECFVPGA*LPTGLSLKSQCMHS
Trigger: AGAGTGCATGCATTGTGACTTCAGACTGAGGCCAGTTGGGAGCCAGGCACCCGGGACAAAGCACTCAGCCGGCACCATCTTCCCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS-3UTR CAA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTCCCGCTGGTGATGGGTaGCCCGTTTCTGTGCCATGT +
Preference number: 5 (lower is better)
Translates to: GWLETQMAAAATISCVARPAGDG*PVSVPC
Trigger: ACATGGCACAGAAACGGGCAACCCATCACCAGCGGG...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCAAGTGGAACATTTCCCTaGAGCCAGGTGACCTGCGGT +
Preference number: 5 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPSGTFP*SQVTCG
Trigger: ACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACT...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCACCAGCTTCGACTCCTTaGAGATTACATTGGTCACCT +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPPASTP*RLHWSP
Trigger: AGGTGACCAATGTAATCTCAAAGGAGTCGAAGCTGG...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGTCCCTGTTCTGGGCGAGTCCTaGCATGACTCCAGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: GQLALGVGSSAAVCPTVPVLGES*HDSSLD
Trigger: GTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAAC...AGGGACAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATTTGCTGAATATGCCTaGAAGAACTTCCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPFAEYA*KNFPAQ
Trigger: CTGGGCAGGGAAGTTCTTCAAGGCATATTCAGCAAA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS TCA 90 bp GGAGGCCTGGAGACCCACCTTCCCATGAGGGGTGTAGCCAGGAACTaGCTTCCATGGTGGAGGAGCACAGCTGATATGTGCTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: GGLETHLPMRGVARN*LPWWRSTADMCSGW
Trigger: CCATCCTGAGCACATATCAGCTGTGCTCCTCCACCATGGAAGTCAGTTCCTGGCTACACCCCTCATGGGAAGGTGGGTCTCCAGGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS TCA 90 bp GAGCCTCACACACAGGAAAGAGGCTCCTGCTGGGTCTGGGCTGGATaGGTGAACAGATTCCGCCCTGGAATGAGGAAGGCGGCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: EPHTQERGSCWVWAG*VNRFRPGMRKAAFS
Trigger: TGAGAAGGCCGCCTTCCTCATTCCAGGGCGGAATCTGTTCACTCATCCAGCCCAGACCCAGCAGGAGCCTCTTTCCTGTGTGTGAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS GCA 90 bp GGCAATTGCCCAGGCTGGGTTCCTGTGTCGCTGGTGAGCAGTATCTaGACCAGCCTCCTTCATGCAGCACAAATTCCCTGCCCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GNCPGWVPVSLVSSI*TSLLHAAQIPCPLE
Trigger: CTCCAAGGGGCAGGGAATTTGTGCTGCATGAAGGAGGCTGGTGCAGATACTGCTCACCAGCGACACAGGAACCCAGCCTGGGCAATTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp TTAACTGTGCGCAGAACCACCGTGTGGCCCTGCGGAGAATGCCTCTaGAGGCTCAGGCCACGTGGCAACCTTTCATGCTCTTCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: LTVRRTTVWPCGECL*RLRPRGNLSCSSGR
Trigger: TCTCCCAGAAGAGCATGAAAGGTTGCCACGTGGCCTGAGCCTGCAGAGGCATTCTCCGCAGGGCCACACGGTGGTTCTGCGCACAGTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp CAAGCAGCTCCTCTAGGAGGGTGCGGCACCAGGCAGGGATCGTTCTaGACTAGCCGTCCACTGGTCGATACCTTGGATGGAAAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: QAAPLGGCGTRQGSF*TSRPLVDTLDGKFS
Trigger: GCTGAACTTTCCATCCAAGGTATCGACCAGTGGACGGCTAGTGCAGAACGATCCCTGCCTGGTGCCGCACCCTCCTAGAGGAGCTGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS GCA 90 bp TGCCCAGTTTCCCAAGCCACAGCACAAGCAGCCATTCCCGACACTTaGCTGTCCCACAACCCTGCCCAGAGCCCTGCTTTCCCTACAGTT +
Preference number: 5 (lower is better)
Translates to: CPVSQATAQAAIPDT*LSHNPAQSPAFPTV
Trigger: AACTGTAGGGAAAGCAGGGCTCTGGGCAGGGTTGTGGGACAGGCAAGTGTCGGGAATGGCTGCTTGTGCTGTGGCTTGGGAAACTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CCA 90 bp CCAGGCAGGGATCGTTCTGCACTAGCCGTCCACTGGTCGATACCTTaGATGGAAAGTTCAGCTGACATCGAGGCCTTCCCCGACCCGTTC +
Preference number: 5 (lower is better)
Translates to: PGRDRSALAVHWSIP*MESSADIEAFPDPF
Trigger: GAACGGGTCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATCCAAGGTATCGACCAGTGGACGGCTAGTGCAGAACGATCCCTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS CCA 90 bp GAGGGTGCGGCACCAGGCAGGGATCGTTCTGCACTAGCCGTCCACTaGTCGATACCTTGGATGGAAAGTTCAGCTGACATCGAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: EGAAPGRDRSALAVH*SIPWMESSADIEAF
Trigger: GAAGGCCTCGATGTCAGCTGAACTTTCCATCCAAGGTATCGACCAGTGGACGGCTAGTGCAGAACGATCCCTGCCTGGTGCCGCACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS CCA 90 bp AGGCTCCTGCTGGGTCTGGGCTGGATGAGTGAACAGATTCCGCCCTaGAATGAGGAAGGCGGCCTTCTCAGAGCAGTGTTCTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: RLLLGLGWMSEQIPP*NEEGGLLRAVFFLR
Trigger: CCTGAGGAAGAACACTGCTCTGAGAAGGCCGCCTTCCTCATTCCAGGGCGGAATCTGTTCACTCATCCAGCCCAGACCCAGCAGGAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS-3UTR CAA 90 bp CATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACCCAGGTGACCTGCGGTaGGGGCCGGCCAGTGATCTT +
Preference number: 5 (lower is better)
Translates to: HGFPEPACRSSQTQTHGHPGDLR*GPASDL
Trigger: AAGATCACTGGCCGGCCCCAACCGCAGGTCACCTGG...GTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTACCAGCTTGGACTCCCTaGGGGGCTGAGGCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: TRTSHMAPSNQEAESEALPAWTP*GAEAGC
Trigger: ACAGCCAGCCTCAGCCCCCAAGGGAGTCCAAGCTGG...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGCAGTGGAACATTTCCCTTGAGCCAGGTGACCTGCGGTTGGGGCCGGCCAGTGAGGCCACTTCAGGCTTaGGAATCCCGGAAACTTCAC +
Preference number: 5 (lower is better)
Translates to: CSGTFPLSQVTCGWGRPVRPLQA*ESRKLH
Trigger: GTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCT...CACTGGCCGGCCCCAACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTTGCACGATGCCCTGCTaGTGGATGTACTCCACTCCC +
Preference number: 5 (lower is better)
Translates to: GWLETQMAAAATISCVARCTMPC*WMYSTP
Trigger: GGGAGTGGAGTACATCCACAAGCAGGGCATCGTGCA...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTACAGGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGGCCTTGCAGGTGTACTaGGCATCGTCATCCCCGCAA +
Preference number: 5 (lower is better)
Translates to: LQDSWPWALEAVQLYVPLALQVY*ASSSPQ
Trigger: TTGCGGGGATGACGATGCCAAGTACACCTGCAAGGC...CAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS TCA 90 bp GTCCGGGAGATCTGTTGTTCTAATCCGCCCAGCTGGGGTGACCTTTaGAACCTCTGGCTGCCACTGCAGAGGCTCTCAATGGAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VREICCSNPPSWGDL*NLWLPLQRLSMESW
Trigger: CCAGGACTCCATTGAGAGCCTCTGCAGTGGCAGCCAGAGGTTTCAAAGGTCACCCCAGCTGGGCGGATTAGAACAACAGATCTCCCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS TCA 90 bp TGCACTAGCCGTCCACTGGTCGATACCTTGGATGGAAAGTTCAGCTaGCATCGAGGCCTTCCCCGACCCGTTCACCACCAGGCACGTGTA +
Preference number: 5 (lower is better)
Translates to: CTSRPLVDTLDGKFS*HRGLPRPVHHQARV
Trigger: TACACGTGCCTGGTGGTGAACGGGTCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATCCAAGGTATCGACCAGTGGACGGCTAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS TCA 90 bp CTGAGTGCTTTGTCCCGGGTGCCTGGCTCCCAACTGGCCTCAGTCTaGAGTCACAATGCATGCACTCTCTCTGTACCTGCCAGTCCCACA +
Preference number: 5 (lower is better)
Translates to: LSALSRVPGSQLASV*SHNACTLSVPASPT
Trigger: TGTGGGACTGGCAGGTACAGAGAGAGTGCATGCATTGTGACTTCAGACTGAGGCCAGTTGGGAGCCAGGCACCCGGGACAAAGCACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS TCA 90 bp GGTGCCCACGCTGCTGGCAGTGGGCCACTCACATCTCCAGGACCATaGCGATGTTGGCCTTTTCTTCAAAGGCATCCACACACTGGACCA +
Preference number: 5 (lower is better)
Translates to: GAHAAGSGPLTSPGP*RCWPFLQRHPHTGP
Trigger: TGGTCCAGTGTGTGGATGCCTTTGAAGAAAAGGCCAACATCGTCATGGTCCTGGAGATGTGAGTGGCCCACTGCCAGCAGCGTGGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS GCA 90 bp GTCTTACCGCAGCTTCTTCCTCGGCAGCTCTCACATGAGTCAGGATaGGAGGCAGCCACACTTCACCACCACCGTACTGCAGAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: VLPQLLPRQLSHESG*EAATLHHHRTAEVP
Trigger: AGGAACCTCTGCAGTACGGTGGTGGTGAAGTGTGGCTGCCTCGCATCCTGACTCATGTGAGAGCTGCCGAGGAAGAAGCTGCGGTAAGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS CCA 90 bp CATGGTCACCGTCTTCTCTGTTGTTTGTTGTGGCAACTGGGCCAGTaGGACAGGAAAGGCGTCCTGAAGCTCTCGGCTGGGAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: HGHRLLCCLLWQLGQ*DRKGVLKLSAGKLL
Trigger: CAGGAGCTTCCCAGCCGAGAGCTTCAGGACGCCTTTCCTGTCCCACTGGCCCAGTTGCCACAACAAACAACAGAGAAGACGGTGACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000464489.5
CDS CCA 90 bp CACCGTGTGGCCCTGCGGAGAATGCCTCTGCAGGCTCAGGCCACGTaGCAACCTTTCATGCTCTTCTGGGAGATGTTACTGGTTCAACCT +
Preference number: 5 (lower is better)
Translates to: HRVALRRMPLQAQAT*QPFMLFWEMLLVQP
Trigger: AGGTTGAACCAGTAACATCTCCCAGAAGAGCATGAAAGGTTGCCACGTGGCCTGAGCCTGCAGAGGCATTCTCCGCAGGGCCACACGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 90 bp GCGAGTACTCACTCTCAGTTCCTAGCACGGGAGGAAGAGAGCTCTTaGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTGG +
Preference number: 5 (lower is better)
Translates to: ASTHSQFLAREEESS*ASGISSLGPWCSHW
Trigger: CCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCTCTTCCTCCCGTGCTAGGAACTGAGAGTGAGTACTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS-3UTR CAA 90 bp GACACTGGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGCTCCTGTTAGCAGCCTaGCTCACAACATCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: DTGEGGGHLHHGKPFHLELLLAA*LTTSWL
Trigger: GAGCCAAGATGTTGTGAGCAAGGCTGCTAACAGGAG...CTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCCAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATCTGAACTTGACAGTTaGATTTTCCTTGACCTCCTG +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPSELDS*IFLDLL
Trigger: CAGGAGGTCAAGGAAAATCAAACTGTCAAGTTCAGA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTACAGGACAGCTGGCCTaGGGCGTTGGAAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVATGQLA*GVGSSA
Trigger: TGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGT...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp ATCATCCACGGTGACTTGGCAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCCTGGTGCCCGTCTTGTaGACACACATGATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: IIHGDLAGALRLASVILGLVPVL*THMMFS
Trigger: GGAGAACATCATGTGTGTCAACAAGACGGGCACCAG...GCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCATGTGGCCCAGAACTCTaGTTTTGGCCTTATTTTTCA +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPCGPEL*FWPYFS
Trigger: TGAAAAATAAGGCCAAAACAAGAGTTCTGGGCCACA...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS TCA 90 bp AAGGACACACCTTCAGGAGGTGGGAGTGCAGGGCATAGCCCTTTATaGGCAGCTCCTGCTGACCCAGTTTCCCCCAAAGCTTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: KDTPSGGGSAGHSPL*AAPADPVSPKAWQF
Trigger: GAACTGCCAAGCTTTGGGGGAAACTGGGTCAGCAGGAGCTGCTCATAAAGGGCTATGCCCTGCACTCCCACCTCCTGAAGGTGTGTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS GCA 90 bp ACCAGCCATGGCAGCCCTCCCTACGTAGTCAATGTCAGACCAGCCTaGTTCCTAATCAACCCGATTCTCAGACTCGGCCCTTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: TSHGSPPYVVNVRPA*FLINPILRLGPSLL
Trigger: GAGCAGAGAAGGGCCGAGTCTGAGAATCGGGTTGATTAGGAAGCAGGCTGGTCTGACATTGACTACGTAGGGAGGGCTGCCATGGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp AACAACTTAACTGTGCGCAGAACCACCGTGTGGCCCTGCGGAGAATaGCTCTGCAGGCTCAGGCCACGTGGCAACCTTTCATGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: NNLTVRRTTVWPCGE*LCRLRPRGNLSCSS
Trigger: AGAAGAGCATGAAAGGTTGCCACGTGGCCTGAGCCTGCAGAGGCATTCTCCGCAGGGCCACACGGTGGTTCTGCGCACAGTTAAGTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp CACAGCCTGTGGACGAGTAGCAGAGCCTGCCGATTCCACATCCTATaGCTTTGTGCCAGCCTTCCTTTGAGGGCCTCATATGGGCAAGTC +
Preference number: 5 (lower is better)
Translates to: HSLWTSSRACRFHIL*LCASLPLRASYGQV
Trigger: GACTTGCCCATATGAGGCCCTCAAAGGAAGGCTGGCACAAAGGCATAGGATGTGGAATCGGCAGGCTCTGCTACTCGTCCACAGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 90 bp CAGCTTCACATCCCCCATGGTCACCGTCTTCTCTGTTGTTTGTTGTaGCAACTGGGCCAGTGGGACAGGAAAGGCGTCCTGAAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: QLHIPHGHRLLCCLL*QLGQWDRKGVLKLS
Trigger: CGAGAGCTTCAGGACGCCTTTCCTGTCCCACTGGCCCAGTTGCCACAACAAACAACAGAGAAGACGGTGACCATGGGGGATGTGAAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000464489.5
CDS-3UTR CAA 90 bp CTACAGGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGCGTCTTCTCTGTTGTTaGTTGTGGCAACTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LQDSWPWALEAVQLYVPLRLLCC*LWQLGQ
Trigger: CTGGCCCAGTTGCCACAACAAACAACAGAGAAGACG...CAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGGGCCGGCCAGTGATCTaGCAGGAGAATCGTCCCATC +
Preference number: 5 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGGRPVI*QENRPI
Trigger: GATGGGACGATTCTCCTGCAAGATCACTGGCCGGCC...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCACCAGCTTCGACTCCTTaGAGATTACATTGGTCACCT +
Preference number: 5 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPPASTP*RLHWSP
Trigger: AGGTGACCAATGTAATCTCAAAGGAGTCGAAGCTGG...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAGCAGCCGCCTTCGGAGGTGTCTaGGGGGCAGGTTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LGNAESLWPSMGILLLAAAFGGV*GAGFFF
Trigger: GAAAAAGAAACCTGCCCCCAAGACACCTCCGAAGGC...GGCTGCTAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTGTTCAGACTCCTGGCTaGGCTCACTGGTTCCATACA +
Preference number: 5 (lower is better)
Translates to: GWLETQMAAAATISCVARVQTPG*AHWFHT
Trigger: TGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGAAC...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTACAGGACAGCTGGCCTTGGGCGTTGGAAGCAGTGCAGCTGTATGTCCCACTGGTGGCTGAGGTAACGTaGGCCAAGGTTTCGTTATCG +
Preference number: 5 (lower is better)
Translates to: LQDSWPWALEAVQLYVPLVAEVT*AKVSLS
Trigger: CGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC...CAGTGGGACATACAGCTGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCATTGCTGATGAAATCCTaGGCATCGTCGGAGATCTCA +
Preference number: 5 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPLLMKS*ASSEIS
Trigger: TGAGATCTCCGACGATGCCAAGGATTTCATCAGCAA...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAAGAGAAATGGAGAGTTaGAACATCTGCAGTGTACTT +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPREMES*NICSVL
Trigger: AAGTACACTGCAGATGTTCAAACTCTCCATTTCTCT...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGACCTTTGGAAATTTTaGGAACATCAAGATCGCCAA +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPDLWKF*EHQDRQ
Trigger: TTGGCGATCTTGATGTTCCAAAAATTTCCAAAGGTC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp GGGGAGAGAGAGGCCTCCCATCCCCAGGAACCCTCTGGGCTGAGCTGTGGCCCAGAAACATACAGAAAATaGTGTGCGTGTGTGTATGGT +
Preference number: 5 (lower is better)
Translates to: GEREASHPQEPSGLSCGPETYRK*CACVYG
Trigger: ACCATACACACACGCACACAATTTTCTGTATGTTTC...TGGGCCACAGCTCAGCCCAGAGGGTTCCTGGGGATGGGAGGCCTCTCTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS TCA 90 bp GTGGCTTCACAGGTATACTTTCCCCTGTCCTCCTCATGGACAGCATaGATCACAAGGCTGAAAGTCCCCCGGATGCCGCAATCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VASQVYFPLSSSWTA*ITRLKVPRMPQSSR
Trigger: CCTGCTGGATTGCGGCATCCGGGGGACTTTCAGCCTTGTGATTCATGCTGTCCATGAGGAGGACAGGGGAAAGTATACCTGTGAAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS TCA 90 bp TCTTGCTTGAGGGCAATTGCCCAGGCTGGGTTCCTGTGTCGCTGGTaGGCAGTATCTGCACCAGCCTCCTTCATGCAGCACAAATTCCCT +
Preference number: 5 (lower is better)
Translates to: SCLRAIAQAGFLCRW*AVSAPASFMQHKFP
Trigger: AGGGAATTTGTGCTGCATGAAGGAGGCTGGTGCAGATACTGCTCACCAGCGACACAGGAACCCAGCCTGGGCAATTGCCCTCAAGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp TCTCACACACATCACACTGTATGGTGTGGGTATGTTTCTGGCCTCTaGCACCACAGTGAGGCTGGGTCGCTGAACAGAATCCACGCAGCC +
Preference number: 5 (lower is better)
Translates to: SHTHHTVWCGYVSGL*HHSEAGSLNRIHAA
Trigger: GGCTGCGTGGATTCTGTTCAGCGACCCAGCCTCACTGTGGTGGCAGAGGCCAGAAACATACCCACACCATACAGTGTGATGTGTGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp GACCCAGTTTCCCCCAAAGCTTGGCAGTTCCTCATTGTCCCCAGCTaGACAGAACTGACTTCTTGCCCACGGTGCATGGTAGGGACTCTA +
Preference number: 5 (lower is better)
Translates to: DPVSPKAWQFLIVPS*TELTSCPRCMVGTL
Trigger: TAGAGTCCCTACCATGCACCGTGGGCAAGAAGTCAGTTCTGTGCAGCTGGGGACAATGAGGAACTGCCAAGCTTTGGGGGAAACTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 90 bp GAGAGCTTGTGGGGCCAGCCATCCTGGCTTGCCCAGGCAGGCTTGTaGAGTTTCCCAGGATTAGGGTCTTTTGGCACCAATACTAAGACA +
Preference number: 5 (lower is better)
Translates to: ESLWGQPSWLAQAGL*SFPGLGSFGTNTKT
Trigger: TGTCTTAGTATTGGTGCCAAAAGACCCTAATCCTGGGAAACTCCACAAGCCTGCCTGGGCAAGCCAGGATGGCTGGCCCCACAAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 90 bp CGTAACTCAGGGGAGTTGGACCACCATCCAAGGTCACACAGCCTGTaGACGAGTAGCAGAGCCTGCCGATTCCACATCCTATGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: RNSGELDHHPRSHSL*TSSRACRFHILCLC
Trigger: ACAAAGGCATAGGATGTGGAATCGGCAGGCTCTGCTACTCGTCCACAGGCTGTGTGACCTTGGATGGTGGTCCAACTCCCCTGAGTTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS-3UTR CAA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCATGGTTTCTGTTAATTTaGAAGAATCCTTCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPWFLLI*KNPSRA
Trigger: CGCGCGGGAAGGATTCTTCAAAATTAACAGAAACCA...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTACACTGAGGGAGGTTTaGGAAATGTGTGACGAGGCA +
Preference number: 5 (lower is better)
Translates to: GWLETQMAAAATISCVARTLREV*EMCDEA
Trigger: TGCCTCGTCACACATTTCCAAAACCTCCCTCAGTGT...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTGGCTTGCTCTCAAATTaGGGGAATGCTGAATCCCTC +
Preference number: 5 (lower is better)
Translates to: GWLETQMAAAATISCVARGLLSN*GNAESL
Trigger: GAGGGATTCAGCATTCCCCAAATTTGAGAGCAAGCC...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGGGCAAGCCTTTCCACTaGGAGGGTCCAGCTACAGGA +
Preference number: 5 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGGKPFH*EGPATG
Trigger: TCCTGTAGCTGGACCCTCCAAGTGGAAAGGCTTGCC...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACAGGCAAGCCTTTCCACTaGGAGGGTCCAGCTACAGGA +
Preference number: 5 (lower is better)
Translates to: PRLLTALQVYLASSSPQTGKPFH*EGPATG
Trigger: TCCTGTAGCTGGACCCTCCAAGTGGAAAGGCTTGCC...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACACTTGCCGCTGCAGGTaGGCACGGAAATCCATCTGC +
Preference number: 5 (lower is better)
Translates to: HGFPEPACRSSQTQTHGHTCRCR*ARKSIC
Trigger: GCAGATGGATTTCCGTGCCAACCTGCAGCGGCAAGT...GTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGGGTCCATTCTTGGCTACACACTaGTATAAGCCTCTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: GEGGGHLHHGKPFHLEGPFLATH*YKPLSS
Trigger: TGAGGACAGAGGCTTATACAAGTGTGTAGCCAAGAA...TGGACCCTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTTGCCTGCTGCCCAGCTaGTTCTCCACCAGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLCLLPS*FSTSSV
Trigger: CACACTGCTGGTGGAGAACAAGCTGGGCAGCAGGCA...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CAGGAGCACTCCGCCTGGCCAGCGTCATTCTTGGCTACACACTTGTATAAGCCTTCCTTCCACGTCTTGTaGGCTGAGTCCCAGATCTCG +
Preference number: 5 (lower is better)
Translates to: QEHSAWPASFLATHLYKPSFHVL*AESQIS
Trigger: CGAGATCTGGGACTCAGCCAACAAGACGTGGAAGGA...AGGCTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCAGGCGGAGTGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GACACTGGAGAAGGAGGGGGCCACCTCCATCACGGCAAGCCTTTCCACTTGGAGAGCCTCAAGGAAAGCTaGGGACACATCTTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: DTGEGGGHLHHGKPFHLESLKES*GHIFFR
Trigger: TCTGAAGAAGATGTGTCCCAAGCTTTCCTTGAGGCT...CTCCAAGTGGAAAGGCTTGCCGTGATGGAGGTGGCCCCCTCCTTCTCCAGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS GCA 90 bp GACCTCCTGAGAGCCGAGGTTCTGCCAGAGGAGCGAACCCAACCTTaGTCTGCTCAGCACTGTCAGTGTGTCAGAAGATGTTCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: DLLRAEVLPEERTQP*SAQHCQCVRRCSEN
Trigger: ATTCTCTGAACATCTTCTGACACACTGACAGTGCTGAGCAGAGCAAGGTTGGGTTCGCTCCTCTGGCAGAACCTCGGCTCTCAGGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp TTCCTCATTGTCCCCAGCTGCACAGAACTGACTTCTTGCCCACGGTaGATGGTAGGGACTCTACCATCCAGCCACACCCTATTCATGGTG +
Preference number: 5 (lower is better)
Translates to: FLIVPSCTELTSCPR*MVGTLPSSHTLFMV
Trigger: CACCATGAATAGGGTGTGGCTGGATGGTAGAGTCCCTACCATGCACCGTGGGCAAGAAGTCAGTTCTGTGCAGCTGGGGACAATGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 90 bp CTACTGTCAACTCCACTGTCACCTGGCGAGCACCACTGCCATTGGTaGCTTCACAGGTATACTTTCCCCTGTCCTCCTCATGGACAGCAT +
Preference number: 5 (lower is better)
Translates to: LLSTPLSPGEHHCHW*LHRYTFPCPPHGQH
Trigger: ATGCTGTCCATGAGGAGGACAGGGGAAAGTATACCTGTGAAGCCACCAATGGCAGTGGTGCTCGCCAGGTGACAGTGGAGTTGACAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS CCA 90 bp CTTCTACTGTCAACTCCACTGTCACCTGGCGAGCACCACTGCCATTaGTGGCTTCACAGGTATACTTTCCCCTGTCCTCCTCATGGACAG +
Preference number: 5 (lower is better)
Translates to: LLLSTPLSPGEHHCH*WLHRYTFPCPPHGQ
Trigger: CTGTCCATGAGGAGGACAGGGGAAAGTATACCTGTGAAGCCACCAATGGCAGTGGTGCTCGCCAGGTGACAGTGGAGTTGACAGTAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS CCA 90 bp TCAGAGGCTCAGGGCCAGCACTGTGCACAGACCTTCGGTTCTGTTTaGTCAGGCCTGGCTGTATGGCTGGTGAGCATCTTACATATCACA +
Preference number: 5 (lower is better)
Translates to: SEAQGQHCAQTFGSV*SGLAVWLVSILHIT
Trigger: TGTGATATGTAAGATGCTCACCAGCCATACAGCCAGGCCTGACCAAACAGAACCGAAGGTCTGTGCACAGTGCTGGCCCTGAGCCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS-3UTR CAA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCGCGGTGGCTCCTTCTTaGATGCAGAGGTTCCGAGGG +
Preference number: 5 (lower is better)
Translates to: SLPMALTALPVFCHFLLAAVAPS*MQRFRG
Trigger: CCCTCGGAACCTCTGCATCAAAGAAGGAGCCACCGC...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTACGAGCACCACTGCCATaGGTGGCTTCACAGGTATAC +
Preference number: 5 (lower is better)
Translates to: TRTSHMAPSNQEAESEALRAPLP*VASQVY
Trigger: GTATACCTGTGAAGCCACCAATGGCAGTGGTGCTCG...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCCCAGGCCTGGTGCTCTaGGTTCCGGCTGAACTCTTG +
Preference number: 5 (lower is better)
Translates to: SLPMALTALPVFCHFLLAPGLVL*VPAELL
Trigger: CAAGAGTTCAGCCGGAACCAAGAGCACCAGGCCTGG...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGGCCATCGTGAGGCTCTaGTACCGTGAGCACGGCCTG +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGAIVRL*YREHGL
Trigger: CAGGCCGTGCTCACGGTACAAGAGCCTCACGATGGC...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGTCGCCAACCCGGTTCTaGAGCAGGATCTCATACTGG +
Preference number: 5 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGSPTRF*SRISYW
Trigger: CCAGTATGAGATCCTGCTCAAGAACCGGGTTGGCGA...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTATCCTTCCACGTCTTGTaGGCTGAGTCCCAGATCTCG +
Preference number: 5 (lower is better)
Translates to: TRTSHMAPSNQEAESEALSFHVL*AESQIS
Trigger: CGAGATCTGGGACTCAGCCAACAAGACGTGGAAGGA...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCTTGCAGGTGTACTaGGCATCGTCATCCCCGCAA +
Preference number: 5 (lower is better)
Translates to: ILGWLETQMAAAATISCVALQVY*ASSSPQ
Trigger: TTGCGGGGATGACGATGCCAAGTACACCTGCAAGGC...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS GCA 90 bp CCTGAGAGCCGAGGTTCTGCCAGAGGAGCGAACCCAACCTTGCTCTaGTCAGCACTGTCAGTGTGTCAGAAGATGTTCAGAGAATGGAAT +
Preference number: 5 (lower is better)
Translates to: PESRGSARGANPTLL*SALSVCQKMFREWN
Trigger: ATTCCATTCTCTGAACATCTTCTGACACACTGACAGTGCTGAGCAGAGCAAGGTTGGGTTCGCTCCTCTGGCAGAACCTCGGCTCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS-3UTR CAA 90 bp CATGGATTTCCAGAACCTGCATGCCGTTCTTCTCAGACACAGACACACGGGCACCTTCTCTGTTGTTTGTaGTGGCAACTGGGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: HGFPEPACRSSQTQTHGHLLCCL*WQLGQW
Trigger: CCACTGGCCCAGTTGCCACAACAAACAACAGAGAAG...GTGCCCGTGTGTCTGTGTCTGAGAAGAACGGCATGCAGGTTCTGGAAATCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATACCAGCTTGGACTCCCTaGGGGGCTGAGGCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIPAWTP*GAEAGC
Trigger: ACAGCCAGCCTCAGCCCCCAAGGGAGTCCAAGCTGG...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTACTCCTGTTAGCAGCCTaGCTCACAACATCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: TRTSHMAPSNQEAESEALLLLAA*LTTSWL
Trigger: GAGCCAAGATGTTGTGAGCAAGGCTGCTAACAGGAG...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGCCATCGTGAGGCTCTaGTACCGTGAGCACGGCCTG +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDAIVRL*YREHGL
Trigger: CAGGCCGTGCTCACGGTACAAGAGCCTCACGATGGC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACTCTTTGCAGAGGGCTTaGCCATCTCTGAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: NRPICPSLTTTRPSLVANSLQRA*PSLSQC
Trigger: GCACTGGCTCAGAGATGGCAAAGCCCTCTGCAAAGA...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGTGCCTGCTGCCCAGCTaGTTCTCCACCAGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGCLLPS*FSTSSV
Trigger: CACACTGCTGGTGGAGAACAAGCTGGGCAGCAGGCA...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTCCAAAGTCGATGAGCTaGATCCTGGTGCCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLPKSMS*ILVPVL
Trigger: CAAGACGGGCACCAGGATCAAGCTCATCGACTTTGG...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS GCA 90 bp AACTTCCTTCTACTGTCAACTCCACTGTCACCTGGCGAGCACCACTaGCATTGGTGGCTTCACAGGTATACTTTCCCCTGTCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: NFLLLSTPLSPGEHH*HWWLHRYTFPCPPH
Trigger: ATGAGGAGGACAGGGGAAAGTATACCTGTGAAGCCACCAATGGCAGTGGTGCTCGCCAGGTGACAGTGGAGTTGACAGTAGAAGGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS GCA 90 bp GACCAGTGTTCCAGTTGCCTCCAACACAGTGATTTCCCTTTTCTTTaGCACCCAGGCAAAGTCTCAATGCCCCTGGGTCCCTTGAGTATC +
Preference number: 5 (lower is better)
Translates to: DQCSSCLQHSDFPFL*HPGKVSMPLGPLSI
Trigger: GATACTCAAGGGACCCAGGGGCATTGAGACTTTGCCTGGGTGGCAAAGAAAAGGGAAATCACTGTGTTGGAGGCAACTGGAACACTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS GCA 90 bp TGCGGAGAATGCCTCTGCAGGCTCAGGCCACGTGGCAACCTTTCATaGTCTTCTGGGAGATGTTACTGGTTCAACCTGTTTGTTGTGCTA +
Preference number: 5 (lower is better)
Translates to: CGECLCRLRPRGNLS*SSGRCYWFNLFVVL
Trigger: TAGCACAACAAACAGGTTGAACCAGTAACATCTCCCAGAAGAGCATGAAAGGTTGCCACGTGGCCTGAGCCTGCAGAGGCATTCTCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 90 bp CACTGTGCACAGACCTTCGGTTCTGTTTGGTCAGGCCTGGCTGTATaGCTGGTGAGCATCTTACATATCACACTCCTGTCTGCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: HCAQTFGSVWSGLAV*LVSILHITLLSAVL
Trigger: AAGCACTGCAGACAGGAGTGTGATATGTAAGATGCTCACCAGCCATACAGCCAGGCCTGACCAAACAGAACCGAAGGTCTGTGCACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS-3UTR CAA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAACAACTCGGCCCAGCTaGGTAGCAAACTTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: SNLGNAESLWPSMGILLLTTRPS*VANFGG
Trigger: CCCACCAAAGTTTGCTACCAAGCTGGGCCGAGTTGT...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GCCTTCCAGGAACCAGGCCACTTCAGGCTTTGGAATCCCGGAAACTTCACATCTGGCTTGCTCTCAAATTaGGGGAATGCTGAATCCCTC +
Preference number: 5 (lower is better)
Translates to: AFQEPGHFRLWNPGNFTSGLLSN*GNAESL
Trigger: GAGGGATTCAGCATTCCCCAAATTTGAGAGCAAGCC...AGATGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCTGGTTCCTGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GCCTTCCAGGAACCAGGCCACTTCAGGCTTTGGAATCCCGGAAACTTCACATCTTCCTGGCTTTGGGGCTaGCTCTCAAATTTGGGGAAT +
Preference number: 5 (lower is better)
Translates to: AFQEPGHFRLWNPGNFTSSWLWG*LSNLGN
Trigger: ATTCCCCAAATTTGAGAGCAAGCCCCAAAGCCAGGA...AGATGTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCTGGTTCCTGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGGTGGTGGAGGCAGTTCAGTTCCTTCCACGTCTaGTTGGCTGAGTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: FSSKASTHWTSLGWWRQFSSFHV*LAESQI
Trigger: GATCTGGGACTCAGCCAACAAGACGTGGAAGGAACT...GAACTGCCTCCACCACCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCAGTTCAGACTCCTGGCTaGGCTCACTGGTTCCATACA +
Preference number: 5 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPVQTPG*AHWFHT
Trigger: TGTATGGAACCAGTGAGCCAAGCCAGGAGTCTGAAC...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCATCTGCCGCATGTACTaGATGCACTCACGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: SLPMALTALPVFCHFLLAICRMY*MHSRSV
Trigger: GACGGAGCGTGAGTGCATCAAGTACATGCGGCAGAT...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TCCCCTTCACCTTCCTCCATCGTTTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCCTTGGAGAGTTTCTaGGCCTCCATGTTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: SPSPSSIVSTMSSAVQVASLESF*ASMFLV
Trigger: TACCAAGAACATGGAGGCCAAGAAACTCTCCAAGGA...AGCCACCTGCACAGCAGAGCTCATTGTGGAAACGATGGAGGAAGGTGAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GTGGCTGAGGTAACGTTGGCCAAGGTTTCGTTATCGTTGTCTCCCATGAAGGGGATGGCTCTCACAGCATaGCCCGTTTTCTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: VAEVTLAKVSLSLSPMKGMALTA*PVFCHF
Trigger: GAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCAT...CCCCTTCATGGGAGACAACGATAACGAAACCTTGGCCAACGTTACCTCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CTAACCTCCTTATGTGTGACCTGGTTCCTAACAGGCTACTTACCGGGGGTTGGGTCTAGTTTTTCTGCATaGAGCGGGCTGGTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: LTSLCVTWFLTGYLPGVGSSFSA*SGLVGD
Trigger: GTCACCAACCAGCCCGCTCAATGCAGAAAAACTAGA...CCCAACCCCCGGTAAGTAGCCTGTTAGGAACCAGGTCACACATAAGGAGGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TTCCACAATGAGCTCTGCTGTGCAGGTGGCTTCTCCAAGACTGTTGACAGCCTTAGACTGTTGACAGCCTaGCAGGTGTACTTGGCATCG +
Preference number: 5 (lower is better)
Translates to: FHNELCCAGGFSKTVDSLRLLTA*QVYLAS
Trigger: CGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCT...AAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATCAACTCACCTTGCACTaGAGGGAGGCCTGGAGACCC +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDQLTLH*REAWRP
Trigger: GGGTCTCCAGGCCTCCCTCAAGTGCAAGGTGAGTTG...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGCCAGCCATCCTGGCTaGCCCAGGCAGGCTTGTGGA +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLASHPG*PRQACG
Trigger: TCCACAAGCCTGCCTGGGCAAGCCAGGATGGCTGGC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS TCA 90 bp GTGCCTTCTCCTCCACCTGTGCAGTCCTCTTCTCTGTATTCTGACTaGGGTTCCACACCTAATTCAAACTCCTGCACCTGGGAGCATTTC +
Preference number: 5 (lower is better)
Translates to: VPSPPPVQSSSLYSD*GSTPNSNSCTWEHF
Trigger: GAAATGCTCCCAGGTGCAGGAGTTTGAATTAGGTGTGGAACCTCAGTCAGAATACAGAGAAGAGGACTGCACAGGTGGAGGAGAAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS TCA 90 bp CACAGACCTTCGGTTCTGTTTGGTCAGGCCTGGCTGTATGGCTGGTaGGCATCTTACATATCACACTCCTGTCTGCAGTGCTTTCCATCT +
Preference number: 5 (lower is better)
Translates to: HRPSVLFGQAWLYGW*ASYISHSCLQCFPS
Trigger: AGATGGAAAGCACTGCAGACAGGAGTGTGATATGTAAGATGCTCACCAGCCATACAGCCAGGCCTGACCAAACAGAACCGAAGGTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS CCA 90 bp TTTGTAATTTCTCCCTTTTTCTTGCTTGAGGGCAATTGCCCAGGCTaGGTTCCTGTGTCGCTGGTGAGCAGTATCTGCACCAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: FVISPFFLLEGNCPG*VPVSLVSSICTSLL
Trigger: AAGGAGGCTGGTGCAGATACTGCTCACCAGCGACACAGGAACCCAGCCTGGGCAATTGCCCTCAAGCAAGAAAAAGGGAGAAATTACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS-3UTR CAA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCATCACCGTCTTCTCTGTaGTTTGTTGTGGCAACTGGG +
Preference number: 5 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPSPSSL*FVVATG
Trigger: CCCAGTTGCCACAACAAACAACAGAGAAGACGGTGA...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGACACTGAGGGAGGTTTaGGAAATGTGTGACGAGGCA +
Preference number: 5 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLTLREV*EMCDEA
Trigger: TGCCTCGTCACACATTTCCAAAACCTCCCTCAGTGT...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCCCAGGTGACCTGCGGTaGGGGCCGGCCAGTGATCTT +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCPGDLR*GPASDL
Trigger: AAGATCACTGGCCGGCCCCAACCGCAGGTCACCTGG...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCACCCACGTCATCTTGGTaGACTCCATGGATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPPTSSW*TPWISR
Trigger: TCTGGAAATCCATGGAGTCAACCAAGATGACGTGGG...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTCACTCCCACGTCATCTaGGTTGACTCCATGGATTTC +
Preference number: 5 (lower is better)
Translates to: ILGWLETQMAAAATISCVHSHVI*VDSMDF
Trigger: GAAATCCATGGAGTCAACCAAGATGACGTGGGAGTG...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCACACTCCCACGTCATCTaGGTTGACTCCATGGATTTC +
Preference number: 5 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPHSHVI*VDSMDF
Trigger: GAAATCCATGGAGTCAACCAAGATGACGTGGGAGTG...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGTTCTGGGCGAGTCCTaGCATGACTCCAGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDVLGES*HDSSLD
Trigger: GTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAAC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATGGCAAGCCTTTCCACTaGGAGGGTCCAGCTACAGGA +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDGKPFH*EGPATG
Trigger: TCCTGTAGCTGGACCCTCCAAGTGGAAAGGCTTGCC...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGCTTCGACTCCTTTGAGATTACATTGGTCACCTCTTTCCTGACATCTGAATTGGCCATCGTGAGGCTCTaGTACCGTGAGCACGGCCTG +
Preference number: 5 (lower is better)
Translates to: SFDSFEITLVTSFLTSELAIVRL*YREHGL
Trigger: CAGGCCGTGCTCACGGTACAAGAGCCTCACGATGGC...CAATTCAGATGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GAGGATTTCCTGCCACTGAGCCCTGAGATCATTGCCATAGAGGACAGTCTTCCATGCCACATGAACATCTaGCAGCTTCTGCTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: EDFLPLSPEIIAIEDSLPCHMNI*QLLLEG
Trigger: GCCTTCAAGCAGAAGCTGCAAGATGTTCATGTGGCA...TGGAAGACTGTCCTCTATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGTGCACGATGCCCTGCTaGTGGATGTACTCCACTCCC +
Preference number: 5 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSCTMPC*WMYSTP
Trigger: GGGAGTGGAGTACATCCACAAGCAGGGCATCGTGCA...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTATTCTTCATCCGGTCCTaGGAGAGTTTCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SNLGNAESLWPSMGILLLFFIRS*ESFLAS
Trigger: GGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGAA...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACATTGACTGGTCATCTTaGAACCAGACAACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: NRPICPSLTTTRPSLVANIDWSS*NQTTSG
Trigger: CCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAAT...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAGGAGAGGGGGTGGTTTaGGGATTATTCAAGCACATT +
Preference number: 5 (lower is better)
Translates to: TRTSHMAPSNQEAESEALGEGVV*GLFKHI
Trigger: AATGTGCTTGAATAATCCCAAAACCACCCCCTCTCC...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGCTTGCCCAGGCAGGCTaGTGGAGTTTCCCAGGATTA +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGLAQAG*WSFPGL
Trigger: TAATCCTGGGAAACTCCACAAGCCTGCCTGGGCAAG...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS GCA 90 bp CTGAGCAGTGCATACCATCCAAATGGGATGGCCAAGAATACTCCGTaGTATACTGAGTCCAGTGTTTTCTCCCCTAATGCCCTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: LSSAYHPNGMAKNTP*YTESSVFSPNALGP
Trigger: TGGACCAAGGGCATTAGGGGAGAAAACACTGGACTCAGTATAGCACGGAGTATTCTTGGCCATCCCATTTGGATGGTATGCACTGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp TGGTCACGGAGAGGCTCCTTTCTCTCTTGGCTTTTTATACCACACTaGGATTTGACTCTAAGAGAAACTGGGAAGGGCCTTCCACGAGCA +
Preference number: 5 (lower is better)
Translates to: WSRRGSFLSWLFIPH*DLTLRETGKGLPRA
Trigger: TGCTCGTGGAAGGCCCTTCCCAGTTTCTCTTAGAGTCAAATCGCAGTGTGGTATAAAAAGCCAAGAGAGAAAGGAGCCTCTCCGTGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS CCA 90 bp AAACTCCTGCACCTGGGAGCATTTCCTCATAATCACATCCAACTCTaGTTGCGACCAGGTCCGTTCTATCCATACACACCCATGGCTATG +
Preference number: 5 (lower is better)
Translates to: KLLHLGAFPHNHIQL*LRPGPFYPYTPMAM
Trigger: CATAGCCATGGGTGTGTATGGATAGAACGGACCTGGTCGCAACCAGAGTTGGATGTGATTATGAGGAAATGCTCCCAGGTGCAGGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS CCA 90 bp ATGCCTCTGCAGGCTCAGGCCACGTGGCAACCTTTCATGCTCTTCTaGGAGATGTTACTGGTTCAACCTGTTTGTTGTGCTAGACAAAGT +
Preference number: 5 (lower is better)
Translates to: MPLQAQATWQPFMLF*EMLLVQPVCCARQS
Trigger: ACTTTGTCTAGCACAACAAACAGGTTGAACCAGTAACATCTCCCAGAAGAGCATGAAAGGTTGCCACGTGGCCTGAGCCTGCAGAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 90 bp TTGTCCTCCCTGAGAGAGGGAGGAAACAGCCTCTTCATAGGCAAATaGCTTGTACTCGTTGCATCTCAAACTCTGCCGGCAAAGCCATTT +
Preference number: 5 (lower is better)
Translates to: LSSLREGGNSLFIGK*LVLVASQTLPAKPF
Trigger: AAATGGCTTTGCCGGCAGAGTTTGAGATGCAACGAGTACAAGCCATTTGCCTATGAAGAGGCTGTTTCCTCCCTCTCTCAGGGAGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 90 bp GAGGGAGGTAGCTGCCTATGGTCACGGAGAGGCTCCTTTCTCTCTTaGCTTTTTATACCACACTGCGATTTGACTCTAAGAGAAACTGGG +
Preference number: 5 (lower is better)
Translates to: EGGSCLWSRRGSFLS*LFIPHCDLTLRETG
Trigger: CCCAGTTTCTCTTAGAGTCAAATCGCAGTGTGGTATAAAAAGCCAAGAGAGAAAGGAGCCTCTCCGTGACCATAGGCAGCTACCTCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS-3UTR CAA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAGTTCTGGGCGAGTCCTaGCATGACTCCAGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIVLGES*HDSSLD
Trigger: GTCCAAGCTGGAGTCATGCAAGGACTCGCCCAGAAC...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAGGCCACTTCAGGCTTaGGAATCCCGGAAACTTCAC +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGRPLQA*ESRKLH
Trigger: GTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTATTCTTGGCTACACACTaGTATAAGCCTCTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: TRTSHMAPSNQEAESEALFLATH*YKPLSS
Trigger: TGAGGACAGAGGCTTATACAAGTGTGTAGCCAAGAA...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAGCCAGGATGGTGAGCTaGCTGCCATTCTCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIARMVS*LPFSLF
Trigger: GAACAGCGAGAATGGCAGCAAGCTCACCATCCTGGC...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAGTTCCTTCCACGTCTaGTTGGCTGAGTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGSSFHV*LAESQI
Trigger: GATCTGGGACTCAGCCAACAAGACGTGGAAGGAACT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTGCCATTTCCTTCTTGCCCTGGTTCCATACACGTaGATTGCACGTACACGGAAC +
Preference number: 5 (lower is better)
Translates to: SLPMALTALPVFCHFLLALVPYT*IARTRN
Trigger: GTTCCGTGTACGTGCAATCAACGTGTATGGAACCAG...GGCAAGAAGGAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TCAAATTTGGGGAATGCTGAATCCCTCTGGCCCTCCATGGGGATTCTCCTGTTAATCCTGGTGCCCGTCTaGTTGACACACATGATGTTC +
Preference number: 5 (lower is better)
Translates to: SNLGNAESLWPSMGILLLILVPV*LTHMMF
Trigger: GAACATCATGTGTGTCAACAAGACGGGCACCAGGAT...TAACAGGAGAATCCCCATGGAGGGCCAGAGGGATTCAGCATTCCCCAAATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp AATCGTCCCATCTGTCCTTCTTTGACCACAACTCGGCCCAGCTTGGTAGCAAACAAGGTTTCGTTATCGTaGTCTCCCATGAAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: NRPICPSLTTTRPSLVANKVSLS*SPMKGE
Trigger: TTCCCCCTTCATGGGAGACAACGATAACGAAACCTT...GTTTGCTACCAAGCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGGACGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTTTGCTGATGAAATCCTaGGCATCGTCGGAGATCTCA +
Preference number: 5 (lower is better)
Translates to: ILGWLETQMAAAATISCVLLMKS*ASSEIS
Trigger: TGAGATCTCCGACGATGCCAAGGATTTCATCAGCAA...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360304.8
CDS-3UTR CAA 90 bp ATTTTGGGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTTCCTTGGAGAGTTTCTaGGCCTCCATGTTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: ILGWLETQMAAAATISCVSLESF*ASMFLV
Trigger: TACCAAGAACATGGAGGCCAAGAAACTCTCCAAGGA...AACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTATCTGCCATTTCCTTCTaGCCATGTACTTCTTCATCC +
Preference number: 5 (lower is better)
Translates to: TRTSHMAPSNQEAESEALSAISF*PCTSSS
Trigger: GGATGAAGAAGTACATGGCAAGAAGGAAATGGCAGA...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CCAAGACTGTTGACAGCCTTGCAGGTGTACTTGGCATCGTCATCCCCGCAAACATCTGCCATTTCCTTCTaGCCATGTACTTCTTCATCC +
Preference number: 5 (lower is better)
Translates to: PRLLTALQVYLASSSPQTSAISF*PCTSSS
Trigger: GGATGAAGAAGTACATGGCAAGAAGGAAATGGCAGA...TGTTTGCGGGGATGACGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GGTTGGCTAGAGACCCAGATGGCTGCAGCAGCCACCATCTCATGTGTTGCCCGTAAAAATACTGGCAGTTaGAAACTAGCAGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: GWLETQMAAAATISCVARKNTGS*KLAAKS
Trigger: GCTTTTTGCTGCTAGTTTCAAACTGCCAGTATTTTT...ACGGGCAACACATGAGATGGTGGCTGCTGCAGCCATCTGGGTCTCTAGCCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGCTTCGACTCCTTTGAGATTACATTGGTCACCTCTTTCCTGACATCTGAATTGTCCCGCCCTTCGAACTaGGCGGTGGCTCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: SFDSFEITLVTSFLTSELSRPSN*AVAPSL
Trigger: CAAAGAAGGAGCCACCGCCAAGTTCGAAGGGCGGGA...CAATTCAGATGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS GCA 90 bp AGAGGGAGGAAACAGCCTCTTCATAGGCAAATGGCTTGTACTCGTTaGATCTCAAACTCTGCCGGCAAAGCCATTTTCCTCCTCAGTTCA +
Preference number: 5 (lower is better)
Translates to: RGRKQPLHRQMACTR*ISNSAGKAIFLLSS
Trigger: TGAACTGAGGAGGAAAATGGCTTTGCCGGCAGAGTTTGAGATGCAACGAGTACAAGCCATTTGCCTATGAAGAGGCTGTTTCCTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 90 bp TCCAACTCTGGTTGCGACCAGGTCCGTTCTATCCATACACACCCATaGCTATGGAGAACTATCCGGATAGTTTATACATCTTGGTGCGTG +
Preference number: 5 (lower is better)
Translates to: SNSGCDQVRSIHTHP*LWRTIRIVYTSWCV
Trigger: CACGCACCAAGATGTATAAACTATCCGGATAGTTCTCCATAGCCATGGGTGTGTATGGATAGAACGGACCTGGTCGCAACCAGAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS CCA 90 bp ACATTCCTTTGCACAGGTCTGAGCTCAAATACCAAGTTCCCGAAATaGCTTCCCTGCCCCTCTATTCTAATCAGTGCCTTCCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: TFLCTGLSSNTKFPK*LPCPSILISAFLLS
Trigger: GGACAACAGGAAGGCACTGATTAGAATAGAGGGGCAGGGAAGCCATTTCGGGAACTTGGTATTTGAGCTCAGACCTGTGCAAAGGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATCGTCTTCTCTGTTGTTaGTTGTGGCAACTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDRLLCC*LWQLGQ
Trigger: CTGGCCCAGTTGCCACAACAAACAACAGAGAAGACG...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAACCCGCCCTTCGAACTaGGCGGTGGCTCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSTRPSN*AVAPSL
Trigger: CAAAGAAGGAGCCACCGCCAAGTTCGAAGGGCGGGT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGCTTCGACTCCTTTGAGATTACATTGGTCACCTCTTTCCTGACATCTGAATTGCCCATCTGTCCTTCTTaGACCACAACTCGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SFDSFEITLVTSFLTSELPICPS*TTTRPS
Trigger: GCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGG...CAATTCAGATGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGCACTCCCACGTCATCTaGGTTGACTCCATGGATTTC +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGHSHVI*VDSMDF
Trigger: GAAATCCATGGAGTCAACCAAGATGACGTGGGAGTG...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTATCCTTTGAGATTACATaGGTCACCTCTTTCCTGACA +
Preference number: 5 (lower is better)
Translates to: TRTSHMAPSNQEAESEALSFEIT*VTSFLT
Trigger: TGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGA...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGTCCTGGCTTTGGGGCTaGCTCTCAAATTTGGGGAAT +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGSWLWG*LSNLGN
Trigger: ATTCCCCAAATTTGAGAGCAAGCCCCAAAGCCAGGA...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGATCATCCACGGTGACTaGGCAGGAGCACTCCGCCTG +
Preference number: 5 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMIIHGD*AGALRL
Trigger: CAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCTGCCTGCTGCCCAGCTaGTTCTCCACCAGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSCLLPS*FSTSSV
Trigger: CACACTGCTGGTGGAGAACAAGCTGGGCAGCAGGCA...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAATCTGCCGCATGTACTaGATGCACTCACGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIICRMY*MHSRSV
Trigger: GACGGAGCGTGAGTGCATCAAGTACATGCGGCAGAT...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGTCTAGTTTTTCTGCATaGAGCGGGCTGGTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGSSFSA*SGLVGD
Trigger: GTCACCAACCAGCCCGCTCAATGCAGAAAAACTAGA...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGCCTTGCAGGTGTACTaGGCATCGTCATCCCCGCAA +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLALQVY*ASSSPQ
Trigger: TTGCGGGGATGACGATGCCAAGTACACCTGCAAGGC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATCTCCCTTTTTCTTGCTaGAGGGCAATTGCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDLPFSC*RAIAQA
Trigger: AGCCTGGGCAATTGCCCTCAAGCAAGAAAAAGGGAG...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCCACAGACTGGCTACTaGTCCTCCCTGAGAGAGGGA +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLPQTGY*SSLREG
Trigger: TCCCTCTCTCAGGGAGGACAAGTAGCCAGTCTGTGG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS TCA 90 bp TTCAACTCCCATAAAAGGGATGGTTTATATAAAGCAACTGCAGGCTaGGACAGCTCCAAAGACTTATTGCTGACTGGGCCTAGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: FNSHKRDGLYKATAG*DSSKDLLLTGPSGA
Trigger: AGCCCCGCTAGGCCCAGTCAGCAATAAGTCTTTGGAGCTGTCTCAGCCTGCAGTTGCTTTATATAAACCATCCCTTTTATGGGAGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp ACTGGCCTCAGTCTGAAGTCACAATGCATGCACTCTCTCTGTACCTaGCAGTCCCACAACTTTTCCCTTTGCTCTGTGACATCTTTACAA +
Preference number: 5 (lower is better)
Translates to: TGLSLKSQCMHSLCT*QSHNFSLCSVTSLQ
Trigger: TTGTAAAGATGTCACAGAGCAAAGGGAAAAGTTGTGGGACTGGCAGGTACAGAGAGAGTGCATGCATTGTGACTTCAGACTGAGGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATTCACCGTCTTCTCTGTaGTTTGTTGTGGCAACTGGG +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDSPSSL*FVVATG
Trigger: CCCAGTTGCCACAACAAACAACAGAGAAGACGGTGA...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACCCATCTGTCCTTCTTaGACCACAACTCGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSPICPS*TTTRPS
Trigger: GCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCCAGGTGACCTGCGGTaGGGGCCGGCCAGTGATCTT +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLPGDLR*GPASDL
Trigger: AAGATCACTGGCCGGCCCCAACCGCAGGTCACCTGG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CATCTGACACCTCCACTTCATCCTTCGGCTCTTCAGGTTTCTCTCCTACCGTTGTCTGAACTTGACAGTTaGATTTTCCTTGACCTCCTG +
Preference number: 5 (lower is better)
Translates to: HLTPPLHPSALQVSLLPLSELDS*IFLDLL
Trigger: CAGGAGGTCAAGGAAAATCAAACTGTCAAGTTCAGA...CAACGGTAGGAGAGAAACCTGAAGAGCCGAAGGATGAAGTGGAGGTGTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTCTTTGCAGAGGGCTTaGCCATCTCTGAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLSLQRA*PSLSQC
Trigger: GCACTGGCTCAGAGATGGCAAAGCCCTCTGCAAAGA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGCCTTCGGAGGTGTCTaGGGGGCAGGTTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLAFGGV*GAGFFF
Trigger: GAAAAAGAAACCTGCCCCCAAGACACCTCCGAAGGC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCGCCAGGATGGTGAGCTaGCTGCCATTCTCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCARMVS*LPFSLF
Trigger: GAACAGCGAGAATGGCAGCAAGCTCACCATCCTGGC...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGTCCACGACAGTGAGGTaGACCTGGGCCTGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKSTTVR*TWACLL
Trigger: CAGCAGGCAGGCCCAGGTCAACCTCACTGTCGTGGA...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAGGACCATGACGATGTaGGCCTTTTCTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGRTMTM*AFSSKA
Trigger: TGCCTTTGAAGAAAAGGCCAACATCGTCATGGTCCT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCCAAAGTCGATGAGCTaGATCCTGGTGCCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLPKSMS*ILVPVL
Trigger: CAAGACGGGCACCAGGATCAAGCTCATCGACTTTGG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAAGGTTTCGTTATCGTaGTCTCCCATGAAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGKVSLS*SPMKGE
Trigger: TTCCCCCTTCATGGGAGACAACGATAACGAAACCTT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360304.8
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATATGGCTCTCACAGCATaGCCCGTTTTCTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDMALTA*PVFCHF
Trigger: GAAATGGCAGAAAACGGGCAATGCTGTGAGAGCCAT...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATATTGACTGGTCATCTTaGAACCAGACAACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDIDWSS*NQTTSG
Trigger: CCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAAT...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGCCTTGCAGGTGTACTaGGCATCGTCATCCCCGCAA +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSALQVY*ASSSPQ
Trigger: TTGCGGGGATGACGATGCCAAGTACACCTGCAAGGC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAGCCTTGCAGGTGTACTaGGCATCGTCATCCCCGCAA +
Preference number: 5 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSALQVY*ASSSPQ
Trigger: TTGCGGGGATGACGATGCCAAGTACACCTGCAAGGC...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATTGTTATGTCCCCATTTaGGGTTGGCTAGAGACCCAG +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDCYVPI*GWLETQ
Trigger: CTGGGTCTCTAGCCAACCCAAAATGGGGACATAACA...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCAAGGAACACCCGCCTaGAGCCCATGGGCTCCCCAA +
Preference number: 5 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEQGTPA*SPWAPQ
Trigger: TTGGGGAGCCCATGGGCTCAAGGCGGGTGTTCCTTG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGAGCCTCAAGGAAAGCTaGGGACACATCTTCAGATTC +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGSLKES*GHIFRF
Trigger: GAATCTGAAGATGTGTCCCAAGCTTTCCTTGAGGCT...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578202.1
CDS TCA 90 bp CACTCTGAGCTTCAGTCTCCTTCTCTAGGAGGGGGCTGGACAAGATaGTCTCCAAGGTCCCATTTAGCTCTGTTTATAATTCAGAGACTT +
Preference number: 5 (lower is better)
Translates to: HSELQSPSLGGGWTR*SPRSHLALFIIQRL
Trigger: AAGTCTCTGAATTATAAACAGAGCTAAATGGGACCTTGGAGATCATCTTGTCCAGCCCCCTCCTAGAGAAGGAGACTGAAGCTCAGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 90 bp CTTTGTGCCAGCCTTCCTTTGAGGGCCTCATATGGGCAAGTCACATaGTTTTCAGCAGTTTGCAAAGCTCATTTCACTAAGCATGTTCCA +
Preference number: 5 (lower is better)
Translates to: LCASLPLRASYGQVT*FSAVCKAHFTKHVP
Trigger: TGGAACATGCTTAGTGAAATGAGCTTTGCAAACTGCTGAAAAGCATGTGACTTGCCCATATGAGGCCCTCAAAGGAAGGCTGGCACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 90 bp TCTGGTTGCGACCAGGTCCGTTCTATCCATACACACCCATGGCTATaGAGAACTATCCGGATAGTTTATACATCTTGGTGCGTGTTACAT +
Preference number: 5 (lower is better)
Translates to: SGCDQVRSIHTHPWL*RTIRIVYTSWCVLH
Trigger: ATGTAACACGCACCAAGATGTATAAACTATCCGGATAGTTCTCCATAGCCATGGGTGTGTATGGATAGAACGGACCTGGTCGCAACCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS CCA 90 bp TTGTCAAAGCTTCAGGTTCTGTCCTTTGGGCTTCTTAATAGTGGCTaGTGCTACCATACCCTGAGGGCATGGAATCTGTTTCTGTTCACT +
Preference number: 5 (lower is better)
Translates to: LSKLQVLSFGLLNSG*CYHTLRAWNLFLFT
Trigger: AGTGAACAGAAACAGATTCCATGCCCTCAGGGTATGGTAGCACCAGCCACTATTAAGAAGCCCAAAGGACAGAACCTGAAGCTTTGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS-3UTR CAA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAGCGGTGGCTCCTTCTTaGATGCAGAGGTTCCGAGGG +
Preference number: 5 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVAVAPS*MQRFRG
Trigger: CCCTCGGAACCTCTGCATCAAAGAAGGAGCCACCGC...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGGGCCGGCCAGTGATCTaGCAGGAGAATCGTCCCATC +
Preference number: 5 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEGRPVI*QENRPI
Trigger: GATGGGACGATTCTCCTGCAAGATCACTGGCCGGCC...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCCAGGCCTGGTGCTCTaGGTTCCGGCTGAACTCTTG +
Preference number: 5 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEPGLVL*VPAELL
Trigger: CAAGAGTTCAGCCGGAACCAAGAGCACCAGGCCTGG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGACAGGACAGCTGGCCTaGGGCGTTGGAAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: DYSCSVLIYHSDGIINQETGQLA*GVGSSA
Trigger: TGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAACAGGACAGCTGGCCTaGGGCGTTGGAAGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVTGQLA*GVGSSA
Trigger: TGCACTGCTTCCAACGCCCAAGGCCAGCTGTCCTGT...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCTCTTTGCAGAGGGCTTaGCCATCTCTGAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCSLQRA*PSLSQC
Trigger: GCACTGGCTCAGAGATGGCAAAGCCCTCTGCAAAGA...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGTGGCCAGCGTCATTCTaGGCTACACACTTGTATAAG +
Preference number: 5 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSWPASF*ATHLYK
Trigger: CTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCA...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGCCTTCGGAGGTGTCTaGGGGGCAGGTTTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSAFGGV*GAGFFF
Trigger: GAAAAAGAAACCTGCCCCCAAGACACCTCCGAAGGC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGTTTGCTGAATATGCCTaGAAGAACTTCCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSFAEYA*KNFPAQ
Trigger: CTGGGCAGGGAAGTTCTTCAAGGCATATTCAGCAAA...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGAGGACCATGACGATGTaGGCCTTTTCTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSRTMTM*AFSSKA
Trigger: TGCCTTTGAAGAAAAGGCCAACATCGTCATGGTCCT...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAATCTGCCGCATGTACTaGATGCACTCACGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSICRMY*MHSRSV
Trigger: GACGGAGCGTGAGTGCATCAAGTACATGCGGCAGAT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCCAAAGTCGATGAGCTaGATCCTGGTGCCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMPKSMS*ILVPVL
Trigger: CAAGACGGGCACCAGGATCAAGCTCATCGACTTTGG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATATCTAGTTTTTCTGCATaGAGCGGGCTGGTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: HGFLTKCLKLLDICKEGISSFSA*SGLVGD
Trigger: GTCACCAACCAGCCCGCTCAATGCAGAAAAACTAGA...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGAGACTGTTGACAGCCTaGCAGGTGTACTTGGCATCG +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLRLLTA*QVYLAS
Trigger: CGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCT...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp ACTAGGACTAGTCACATGGCCCCATCTAACCAGGAAGCCGAGAGTGAAGCCCTAAGACCATCCACAATATaGTTTGAACATCTGAAGACA +
Preference number: 5 (lower is better)
Translates to: TRTSHMAPSNQEAESEALRPSTI*FEHLKT
Trigger: TGTCTTCAGATGTTCAAACAATATTGTGGATGGTCT...TAGGGCTTCACTCTCGGCTTCCTGGTTAGATGGGGCCATGTGACTAGTCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAGACAGACATTTCACCTaGCTCTGTCCCCTGGCCATC +
Preference number: 5 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSDRHFT*LCPLAI
Trigger: GATGGCCAGGGGACAGAGCAAGGTGAAATGTCTGTC...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTGGTTGGACTCAGGCGTaGTCCCTGGTTCCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLGWTQA*SLVPAG
Trigger: CCCAGCTGGAACCAGGGACAACGCCTGAGTCCAACC...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATGGTTGGACTCAGGCGTaGTCCCTGGTTCCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYGWTQA*SLVPAG
Trigger: CCCAGCTGGAACCAGGGACAACGCCTGAGTCCAACC...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000578202.1
CDS GCA 90 bp TCAAAGCTTCAGGTTCTGTCCTTTGGGCTTCTTAATAGTGGCTGGTaGTACCATACCCTGAGGGCATGGAATCTGTTTCTGTTCACTAAA +
Preference number: 5 (lower is better)
Translates to: SKLQVLSFGLLNSGW*YHTLRAWNLFLFTK
Trigger: TTTAGTGAACAGAAACAGATTCCATGCCCTCAGGGTATGGTAGCACCAGCCACTATTAAGAAGCCCAAAGGACAGAACCTGAAGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS-3UTR CAA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCTTCTCTGTTGTTTGTaGTGGCAACTGGGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMLLCCL*WQLGQW
Trigger: CCACTGGCCCAGTTGCCACAACAAACAACAGAGAAG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCGTCTTCTCTGTTGTTaGTTGTGGCAACTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMRLLCC*LWQLGQ
Trigger: CTGGCCCAGTTGCCACAACAAACAACAGAGAAGACG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATGCGGTGGCTCCTTCTTaGATGCAGAGGTTCCGAGGG +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYAVAPS*MQRFRG
Trigger: CCCTCGGAACCTCTGCATCAAAGAAGGAGCCACCGC...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTACCCGCCCTTCGAACTaGGCGGTGGCTCCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLTRPSN*AVAPSL
Trigger: CAAAGAAGGAGCCACCGCCAAGTTCGAAGGGCGGGT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACCCGCTGGTGATGGGTaGCCCGTTTCTGTGCCATGT +
Preference number: 5 (lower is better)
Translates to: THNIHAHKGYILNTKVIEPAGDG*PVSVPC
Trigger: ACATGGCACAGAAACGGGCAACCCATCACCAGCGGG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCCCATCTGTCCTTCTTaGACCACAACTCGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEPICPS*TTTRPS
Trigger: GCTGGGCCGAGTTGTGGTCAAAGAAGGACAGATGGG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATACCAGCTTCGACTCCTTaGAGATTACATTGGTCACCT +
Preference number: 5 (lower is better)
Translates to: HGFLTKCLKLLDICKEGIPASTP*RLHWSP
Trigger: AGGTGACCAATGTAATCTCAAAGGAGTCGAAGCTGG...TATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACCAGGCCTGGTGCTCTaGGTTCCGGCTGAACTCTTG +
Preference number: 5 (lower is better)
Translates to: THNIHAHKGYILNTKVIEPGLVL*VPAELL
Trigger: CAAGAGTTCAGCCGGAACCAAGAGCACCAGGCCTGG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCCTCCTGTTAGCAGCCTaGCTCACAACATCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSLLLAA*LTTSWL
Trigger: GAGCCAAGATGTTGTGAGCAAGGCTGCTAACAGGAG...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAACTTGCCGCTGCAGGTaGGCACGGAAATCCATCTGC +
Preference number: 5 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVTCRCR*ARKSIC
Trigger: GCAGATGGATTTCCGTGCCAACCTGCAGCGGCAAGT...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGTGCCACATGAACATCTaGCAGCTTCTGCTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLCHMNI*QLLLEG
Trigger: GCCTTCAAGCAGAAGCTGCAAGATGTTCATGTGGCA...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATATCATCCACGGTGACTaGGCAGGAGCACTCCGCCTG +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYIIHGD*AGALRL
Trigger: CAGGCGGAGTGCTCCTGCCAAGTCACCGTGGATGAT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCAAGTTCCTTCCACGTCTaGTTGGCTGAGTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSSSFHV*LAESQI
Trigger: GATCTGGGACTCAGCCAACAAGACGTGGAAGGAACT...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGCTGGTTCCATACACGTaGATTGCACGTACACGGAAC +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLLVPYT*IARTRN
Trigger: GTTCCGTGTACGTGCAATCAACGTGTATGGAACCAG...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGCTTCGACTCCTTTGAGATTACATTGGTCACCTCTTTCCTGACATCTGAATTGTCTAGTTTTTCTGCATaGAGCGGGCTGGTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: SFDSFEITLVTSFLTSELSSFSA*SGLVGD
Trigger: GTCACCAACCAGCCCGCTCAATGCAGAAAAACTAGA...CAATTCAGATGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGAGTCGAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGATTGACTGGTCATCTTaGAACCAGACAACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLIDWSS*NQTTSG
Trigger: CCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAAT...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCAGACTGTTGACAGCCTaGCAGGTGTACTTGGCATCG +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSRLLTA*QVYLAS
Trigger: CGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp TCCCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGTGTGGCCCAGAACTCTaGTTTTGGCCTTATTTTTCA +
Preference number: 5 (lower is better)
Translates to: SHGFLTKCLKLLDICKEGCGPEL*FWPYFS
Trigger: TGAAAAATAAGGCCAAAACAAGAGTTCTGGGCCACA...CCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCCGGGAGCCACCTTGTTaGACTGTAGGTCATAAGAGC +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCREPPC*TVGHKS
Trigger: GCTCTTATGACCTACAGTCAAACAAGGTGGCTCCCG...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360772.7
CDS-3UTR CAA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTATCTCCCCTAATGCCCTaGGTCCATACTGCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVSPLMP*VHTAGV
Trigger: GACCCCAGCAGTATGGACCAAGGGCATTAGGGGAGA...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGAATGGCTTGTACTCGTaGCATCTCAAACTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLNGLYS*HLKLCR
Trigger: CCGGCAGAGTTTGAGATGCAACGAGTACAAGCCATT...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS GCA 90 bp AATCAAAGAAAGTGGGAGGCACAGTTTGTTTTGACTGCTGTACTGTaGTATGCGGCCTCGGGAAAGTTGCCTAATAAACTTCTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: NQRKWEAQFVLTAVL*YAASGKLPNKLLCF
Trigger: AAAGCACAGAAGTTTATTAGGCAACTTTCCCGAGGCCGCATAGCACAGTACAGCAGTCAAAACAAACTGTGCCTCCCACTTTCTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 90 bp GACATGCCTGCTTCTGCTATGATTAAAAGCATCCTGAGGCCTCACTaGATGCAGATACTGGCACCAAGCCAAATAAGCTTCTTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: DMPASAMIKSILRPH*MQILAPSQISFFSL
Trigger: TAAAGAAAAGAAGCTTATTTGGCTTGGTGCCAGTATCTGCATCCAGTGAGGCCTCAGGATGCTTTTAATCATAGCAGAAGCAGGCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS-3UTR CAA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGACAACTCGGCCCAGCTaGGTAGCAAACTTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: DYSCSVLIYHSDGIINQETTRPS*VANFGG
Trigger: CCCACCAAAGTTTGCTACCAAGCTGGGCCGAGTTGT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGACAACTCGGCCCAGCTaGGTAGCAAACTTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKTTRPS*VANFGG
Trigger: CCCACCAAAGTTTGCTACCAAGCTGGGCCGAGTTGT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCCCCACGTCATCTTGGTaGACTCCATGGATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSPTSSW*TPWISR
Trigger: TCTGGAAATCCATGGAGTCAACCAAGATGACGTGGG...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTTGGCTCACTGGTTCCATACACGTTGATTGCACGTACACGGAACTTATATTCGTCCTTTGAGATTACATaGGTCACCTCTTTCCTGACA +
Preference number: 5 (lower is better)
Translates to: LGSLVPYTLIARTRNLYSSFEIT*VTSFLT
Trigger: TGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGA...CGAATATAAGTTCCGTGTACGTGCAATCAACGTGTATGGAACCAGTGAGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCTCCTGGCTTTGGGGCTaGCTCTCAAATTTGGGGAAT +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCSWLWG*LSNLGN
Trigger: ATTCCCCAAATTTGAGAGCAAGCCCCAAAGCCAGGA...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTACTTGCCGCTGCAGGTaGGCACGGAAATCCATCTGC +
Preference number: 5 (lower is better)
Translates to: SSSLESVENEDVLNSGYLTCRCR*ARKSIC
Trigger: GCAGATGGATTTCCGTGCCAACCTGCAGCGGCAAGT...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAAGAGAGCTCTaGGGCCTCCGGGATTTCATC +
Preference number: 5 (lower is better)
Translates to: SSSLESVENEDVLNSGYLGGREL*GLRDFI
Trigger: GATGAAATCCCGGAGGCCCAAGAGCTCTCTTCCTCC...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTGCACGATGCCCTGCTaGTGGATGTACTCCACTCCC +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYCTMPC*WMYSTP
Trigger: GGGAGTGGAGTACATCCACAAGCAGGGCATCGTGCA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCATCCTGGTGCCCGTCTaGTTGACACACATGATGTTC +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCILVPV*LTHMMF
Trigger: GAACATCATGTGTGTCAACAAGACGGGCACCAGGAT...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCATTGACTGGTCATCTTaGAACCAGACAACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSIDWSS*NQTTSG
Trigger: CCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAAT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATCCCAGAACTCTTGTTTaGGCCTTATTTTTCATGAGC +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDPRTLV*ALFFMS
Trigger: GCTCATGAAAAATAAGGCCAAAACAAGAGTTCTGGG...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCTGTTATGTCCCCATTTaGGGTTGGCTAGAGACCCAG +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSCYVPI*GWLETQ
Trigger: CTGGGTCTCTAGCCAACCCAAAATGGGGACATAACA...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTCCACTGCACAGAACCTaGGCTGCTGCAAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: SSSLESVENEDVLNSGYLPLHRT*AAARGN
Trigger: GTTCCCTCTTGCAGCAGCCAAGGTTCTGTGCAGTGG...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS TCA 90 bp ATAAAACAACATCCTCCAAATGGCCAATTCTTCTGCCCCATAAGATaGTTCAGAAATTCAGGGCATTTCTCGGTAACATCCTTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: IKQHPPNGQFFCPIR*FRNSGHFSVTSLQG
Trigger: GCCCTGCAAGGATGTTACCGAGAAATGCCCTGAATTTCTGAATCATCTTATGGGGCAGAAGAATTGGCCATTTGGAGGATGTTGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS GCA 90 bp GTCAGAAGATGTTCAGAGAATGGAATGGGGCCTGGAACTGATGTGTaGGTTAATGTGACTAAACAAGGTCAACATGAGACAAAAACCCTT +
Preference number: 5 (lower is better)
Translates to: VRRCSENGMGPGTDV*VNVTKQGQHETKTL
Trigger: AAGGGTTTTTGTCTCATGTTGACCTTGTTTAGTCACATTAACGCACACATCAGTTCCAGGCCCCATTCCATTCTCTGAACATCTTCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418370.6
ENST00000515434.1
ENST00000583087.5
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCGAGCACCACTGCCATaGGTGGCTTCACAGGTATAC +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLRAPLP*VASQVY
Trigger: GTATACCTGTGAAGCCACCAATGGCAGTGGTGCTCG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATAGTGGAACATTTCCCTaGAGCCAGGTGACCTGCGGT +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYSGTFP*SQVTCG
Trigger: ACCGCAGGTCACCTGGCTCAAGGGAAATGTTCCACT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCCTCACAAATGACCTATaGGCACTGTCCAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCLTNDL*ALSKPW
Trigger: CCAAGGTTTGGACAGTGCCAATAGGTCATTTGTGAG...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTTCGCCAACCCGGTTCTaGAGCAGGATCTCATACTGG +
Preference number: 5 (lower is better)
Translates to: SSSLESVENEDVLNSGYLSPTRF*SRISYW
Trigger: CCAGTATGAGATCCTGCTCAAGAACCGGGTTGGCGA...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCTGGCCAGCGTCATTCTaGGCTACACACTTGTATAAG +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSWPASF*ATHLYK
Trigger: CTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCA...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAATCCTTCCACGTCTTGTaGGCTGAGTCCCAGATCTCG +
Preference number: 5 (lower is better)
Translates to: THNIHAHKGYILNTKVIESFHVL*AESQIS
Trigger: CGAGATCTGGGACTCAGCCAACAAGACGTGGAAGGA...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCTCCTTGGAGAGTTTCTaGGCCTCCATGTTCTTGGTA +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCSLESF*ASMFLV
Trigger: TACCAAGAACATGGAGGCCAAGAAACTCTCCAAGGA...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTATTCTTCATCCGGTCCTaGGAGAGTTTCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVFFIRS*ESFLAS
Trigger: GGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGAA...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCAGCCTCAAGGAAAGCTaGGGACACATCTTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSSLKES*GHIFFR
Trigger: TCTGAAGAAGATGTGTCCCAAGCTTTCCTTGAGGCT...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp CCATGGGTTCTTAACCAAATGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAGAGAAATGGAGAGTTaGAACATCTGCAGTGTACTT +
Preference number: 5 (lower is better)
Translates to: PWVLNQMSEAARHLQRGDREMES*NICSVL
Trigger: AAGTACACTGCAGATGTTCAAACTCTCCATTTCTCT...ATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACATTTGGTTAAGAACCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCGGAGAGGGGGTGGTTTaGGGATTATTCAAGCACATT +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSGEGVV*GLFKHI
Trigger: AATGTGCTTGAATAATCCCAAAACCACCCCCTCTCC...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGATTCCAGAGAGAGTCTaGCCCCATCAGAAGGAAGAA +
Preference number: 5 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMIPERV*PHQKEE
Trigger: TTCTTCCTTCTGATGGGGCAAGACTCTCTCTGGAAT...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360772.7
CDS-3UTR CAA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTCCAACACAGATTGGTTaGTCCTGGGCTAGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: SSSLESVENEDVLNSGYLPTQIG*SWARSL
Trigger: GAGGCTCCTAGCCCAGGACAAACCAATCTGTGTTGG...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAGCTCCAAAGACTTATaGCTGACTGGGCCTAGCGGG +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLSSKDL*LTGPSG
Trigger: CCCGCTAGGCCCAGTCAGCAATAAGTCTTTGGAGCT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS TCA 90 bp AAGGTGGCAACACTGAGTTTTCCAGTCTCAATACTGACAGCAACCTaGGATAGAACCCGTGTGTCATATTACAATAGGAGAACAAGACAA +
Preference number: 5 (lower is better)
Translates to: KVATLSFPVSILTAT*DRTRVSYYNRRTRQ
Trigger: TTGTCTTGTTCTCCTATTGTAATATGACACACGGGTTCTATCTCAGGTTGCTGTCAGTATTGAGACTGGAAAACTCAGTGTTGCCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS-3UTR CAA 90 bp TCGAAGAAGCATAATGTCCTTAATGCTTACACTCATGACAAGTTGAGAGTCAGCTGGTTTCTGTTAATTTaGAAGAATCCTTCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: SKKHNVLNAYTHDKLRVSWFLLI*KNPSRA
Trigger: CGCGCGGGAAGGATTCTTCAAAATTAACAGAAACCA...GCTGACTCTCAACTTGTCATGAGTGTAAGCATTAAGGACATTATGCTTCTTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCTGGTTTCTGTTAATTTaGAAGAATCCTTCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCWFLLI*KNPSRA
Trigger: CGCGCGGGAAGGATTCTTCAAAATTAACAGAAACCA...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCTTCTCTGTTGTTTGTaGTGGCAACTGGGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYLLCCL*WQLGQW
Trigger: CCACTGGCCCAGTTGCCACAACAAACAACAGAGAAG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAACACTGAGGGAGGTTTaGGAAATGTGTGACGAGGCA +
Preference number: 5 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVTLREV*EMCDEA
Trigger: TGCCTCGTCACACATTTCCAAAACCTCCCTCAGTGT...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAGGCTTGCTCTCAAATTaGGGGAATGCTGAATCCCTC +
Preference number: 5 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVGLLSN*GNAESL
Trigger: GAGGGATTCAGCATTCCCCAAATTTGAGAGCAAGCC...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAAGGCCACTTCAGGCTTaGGAATCCCGGAAACTTCAC +
Preference number: 5 (lower is better)
Translates to: THNIHAHKGYILNTKVIERPLQA*ESRKLH
Trigger: GTGAAGTTTCCGGGATTCCAAAGCCTGAAGTGGCCT...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCTGGTGCCCGTCTTGTaGACACACATGATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLLVPVL*THMMFS
Trigger: GGAGAACATCATGTGTGTCAACAAGACGGGCACCAG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCTGGTGCCCGTCTTGTaGACACACATGATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYLVPVL*THMMFS
Trigger: GGAGAACATCATGTGTGTCAACAAGACGGGCACCAG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGATCCTGGTGCCCGTCTaGTTGACACACATGATGTTC +
Preference number: 5 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKILVPV*LTHMMF
Trigger: GAACATCATGTGTGTCAACAAGACGGGCACCAGGAT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAATTCTTCATCCGGTCCTaGGAGAGTTTCTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: THNIHAHKGYILNTKVIEFFIRS*ESFLAS
Trigger: GGAGGCCAAGAAACTCTCCAAGGACCGGATGAAGAA...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAGACTGTTGACAGCCTaGCAGGTGTACTTGGCATCG +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLRLLTA*QVYLAS
Trigger: CGATGCCAAGTACACCTGCAAGGCTGTCAACAGTCT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGGCTTTCAGAAATGAATaGCTGGAGTACTGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLAFRNE*LEYWEK
Trigger: TTTCTCCCAGTACTCCAGCAATTCATTTCTGAAAGC...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATCACATCCAACTCTGGTaGCGACCAGGTCCGTTCTAT +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYHIQLW*RPGPFY
Trigger: ATAGAACGGACCTGGTCGCAACCAGAGTTGGATGTG...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAAATGCCCCTGGGTCCCTaGAGTATCCAGCTAAAAGAC +
Preference number: 5 (lower is better)
Translates to: THNIHAHKGYILNTKVIEMPLGP*SIQLKD
Trigger: GTCTTTTAGCTGGATACTCAAGGGACCCAGGGGCAT...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTATGTTTCAACTCACCTaGCACTTGAGGGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLMFQLT*HLREAW
Trigger: CCAGGCCTCCCTCAAGTGCAAGGTGAGTTGAAACAT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAATTGCTGGGAGACCTaGTGCAAGTCAGTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLNCWET*CKSVPL
Trigger: GAGGGGAACTGACTTGCACAAGGTCTCCCAGCAATT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTCACCGTCTTCTCTGTaGTTTGTTGTGGCAACTGGG +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYSPSSL*FVVATG
Trigger: CCCAGTTGCCACAACAAACAACAGAGAAGACGGTGA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGCTCACAAATGACCTATaGGCACTGTCCAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: DYSCSVLIYHSDGIINQELTNDL*ALSKPW
Trigger: CCAAGGTTTGGACAGTGCCAATAGGTCATTTGTGAG...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCTCTGAACTTGACAGTTaGATTTTCCTTGACCTCCTG +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCSELDS*IFLDLL
Trigger: CAGGAGGTCAAGGAAAATCAAACTGTCAAGTTCAGA...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTTGCCACATGAACATCTaGCAGCTTCTGCTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: SSSLESVENEDVLNSGYLCHMNI*QLLLEG
Trigger: GCCTTCAAGCAGAAGCTGCAAGATGTTCATGTGGCA...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGTGGCCAGCGTCATTCTaGGCTACACACTTGTATAAG +
Preference number: 5 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKWPASF*ATHLYK
Trigger: CTTATACAAGTGTGTAGCCAAGAATGACGCTGGCCA...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAACTGGTTCCATACACGTaGATTGCACGTACACGGAAC +
Preference number: 5 (lower is better)
Translates to: THNIHAHKGYILNTKVIELVPYT*IARTRN
Trigger: GTTCCGTGTACGTGCAATCAACGTGTATGGAACCAG...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTATTGACTGGTCATCTTaGAACCAGACAACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLIDWSS*NQTTSG
Trigger: CCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAAT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACCCAGAACTCTTGTTTaGGCCTTATTTTTCATGAGC +
Preference number: 5 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSPRTLV*ALFFMS
Trigger: GCTCATGAAAAATAAGGCCAAAACAAGAGTTCTGGG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGGCTTTCAGAAATGAATaGCTGGAGTACTGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMAFRNE*LEYWEK
Trigger: TTTCTCCCAGTACTCCAGCAATTCATTTCTGAAAGC...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCCCAGCTCTTTATCAGTaGAAATCTGTTTCATCGTGG +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCPALYQ*KSVSSW
Trigger: CCACGATGAAACAGATTTCAACTGATAAAGAGCTGG...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTACCTACCTGCCCCCATaGCTACACCTTTCCAACATA +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLTYLPP*LHLSNI
Trigger: TATGTTGGAAAGGTGTAGCAATGGGGGCAGGTAGGT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTTCCAGACATCAGGATaGGGACTGATGAGGACTGTC +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYFQTSG*GLMRTV
Trigger: GACAGTCCTCATCAGTCCCAATCCTGATGTCTGGAA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTAGCATCCTGTTGACCTaGGGCAAGTCACTTAACCAC +
Preference number: 5 (lower is better)
Translates to: SSSLESVENEDVLNSGYLSILLT*GKSLNH
Trigger: GTGGTTAAGTGACTTGCCCAAGGTCAACAGGATGCT...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTTTTGCTGAATATGCCTaGAAGAACTTCCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSSLESVENEDVLNSGYLFAEYA*KNFPAQ
Trigger: CTGGGCAGGGAAGTTCTTCAAGGCATATTCAGCAAA...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAGGACCATGACGATGTaGGCCTTTTCTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLRTMTM*AFSSKA
Trigger: TGCCTTTGAAGAAAAGGCCAACATCGTCATGGTCCT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTAGCCTCAAGGAAAGCTaGGGACACATCTTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SSSLESVENEDVLNSGYLSLKES*GHIFFR
Trigger: TCTGAAGAAGATGTGTCCCAAGCTTTCCTTGAGGCT...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp TGTCTGAAGCTGCTAGACATCTGCAAAGAGGGGATAAGTTTAGATTTCCTACTGAAAAATACTGGCAGTTaGAAACTAGCAGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: CLKLLDICKEGISLDFLLKNTGS*KLAAKS
Trigger: GCTTTTTGCTGCTAGTTTCAAACTGCCAGTATTTTT...CAGTAGGAAATCTAAACTTATCCCCTCTTTGCAGATGTCTAGCAGCTTCAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp CTTTCTAGACCATCCACAATATTGTTTGAACATCTGAAGACATGGGGAACTTGCGTGACTGTCGAGCATTaGAAATGTAACTCATACAAC +
Preference number: 5 (lower is better)
Translates to: LSRPSTILFEHLKTWGTCVTVEH*KCNSYN
Trigger: GTTGTATGAGTTACATTTCAAATGCTCGACAGTCAC...GCAAGTTCCCCATGTCTTCAGATGTTCAAACAATATTGTGGATGGTCTAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TATGGAACCCATAAGGTAGGTCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGCAGGGAAACTACTTGTaGAATGGAATTTTTGTGGAC +
Preference number: 5 (lower is better)
Translates to: YGTHKVGQVLWRVLRMKMQGNYL*NGIFVD
Trigger: GTCCACAAAAATTCCATTCAACAAGTAGTTTCCCTG...CATCTTCATTCTCAACACTCTCCAAAGAACTTGACCTACCTTATGGGTTCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCATTTGCTTGTAGGGATTaGTTCCCATGTCACTTCATT +
Preference number: 5 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSFACRD*FPCHFI
Trigger: AATGAAGTGACATGGGAACAAATCCCTACAAGCAAA...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTCTGCCATTTCCTTCTaGCCATGTACTTCTTCATCC +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYSAISF*PCTSSS
Trigger: GGATGAAGAAGTACATGGCAAGAAGGAAATGGCAGA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGAATATAGATGATGCTTaGCTCACTTGCCCACTGCTA +
Preference number: 5 (lower is better)
Translates to: DYSCSVLIYHSDGIINQENIDDA*LTCPLL
Trigger: TAGCAGTGGGCAAGTGAGCAAAGCATCATCTATATT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGAATATAGATGATGCTTaGCTCACTTGCCCACTGCTA +
Preference number: 5 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKNIDDA*LTCPLL
Trigger: TAGCAGTGGGCAAGTGAGCAAAGCATCATCTATATT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp ACACACAACATACACGCACACAAAGGTTATATTCTGAACACAAAAGTGATAGAATCCAGAAATATTTCTTaGAGACCTGCTGGCTACAGG +
Preference number: 5 (lower is better)
Translates to: THNIHAHKGYILNTKVIESRNIS*RPAGYR
Trigger: CCTGTAGCCAGCAGGTCTCAAAGAAATATTTCTGGA...TTCTATCACTTTTGTGTTCAGAATATAACCTTTGTGTGCGTGTATGTTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS-3UTR CAA 90 bp GAGAGTTTGAACATCTGCAGTGTACTTTGGAATAAAGTGGCTCAACTGCTTTCACTTCAGGGAAACTACTaGTTGAATGGAATTTTTGTG +
Preference number: 5 (lower is better)
Translates to: ESLNICSVLWNKVAQLLSLQGNY*LNGIFV
Trigger: CACAAAAATTCCATTCAACAAGTAGTTTCCCTGAAG...TGAAAGCAGTTGAGCCACTTTATTCCAAAGTACACTGCAGATGTTCAAACTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS GCA 90 bp GTTCTAGTCTTCCAGTTTTATGCCTTTGAGCTGACAATTGGTTGTTaGTTTACTGACCAAAGACCTTTGGAAATTTTTGGAACATCAAGA +
Preference number: 5 (lower is better)
Translates to: VLVFQFYAFELTIGC*FTDQRPLEIFGTSR
Trigger: TCTTGATGTTCCAAAAATTTCCAAAGGTCTTTGGTCAGTAAAGCAACAACCAATTGTCAGCTCAAAGGCATAAAACTGGAAGACTAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS-3UTR CAA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTATTCAGCTGGCCCGAATaGGTTTCTGTTAATTTTGAA +
Preference number: 5 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVFSWPE*VSVNFE
Trigger: TTCAAAATTAACAGAAACCAATTCGGGCCAGCTGAA...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTTCCTTTGAGATTACATaGGTCACCTCTTTCCTGACA +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLSFEIT*VTSFLT
Trigger: TGTCAGGAAAGAGGTGACCAATGTAATCTCAAAGGA...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCCCAGAACTCTTGTTTaGGCCTTATTTTTCATGAGC +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLPRTLV*ALFFMS
Trigger: GCTCATGAAAAATAAGGCCAAAACAAGAGTTCTGGG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTGTGGCCCAGAACTCTaGTTTTGGCCTTATTTTTCA +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYCGPEL*FWPYFS
Trigger: TGAAAAATAAGGCCAAAACAAGAGTTCTGGGCCACA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
ENST00000578202.1
CDS-3UTR CAA 90 bp TCAAGTTCTTTGGAGAGTGTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGCTTTCAGAAATGAATaGCTGGAGTACTGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: SSSLESVENEDVLNSGYLAFRNE*LEYWEK
Trigger: TTTCTCCCAGTACTCCAGCAATTCATTTCTGAAAGC...AAGATAGCCAGAGTTTAATACATCTTCATTCTCAACACTCTCCAAAGAACTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp AGAAAGTTAAAAATTCCTAAAGACGCAAGTCTGAGTGCATTTACCAGGTCTAAGAGAGAAATGGAGAGTTaGAACATCTGCAGTGTACTT +
Preference number: 5 (lower is better)
Translates to: RKLKIPKDASLSAFTRSKREMES*NICSVL
Trigger: AAGTACACTGCAGATGTTCAAACTCTCCATTTCTCT...CTTAGACCTGGTAAATGCACTCAGACTTGCGTCTTTAGGAATTTTTAACTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp GACTACAGTTGTAGTGTTCTCATTTACCATTCTGATGGCATAATAAACCAAGAGAGAGAAATGGAGAGTTaGAACATCTGCAGTGTACTT +
Preference number: 5 (lower is better)
Translates to: DYSCSVLIYHSDGIINQEREMES*NICSVL
Trigger: AAGTACACTGCAGATGTTCAAACTCTCCATTTCTCT...CTCTTGGTTTATTATGCCATCAGAATGGTAAATGAGAACACTACAACTGTAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTCCAGCTCTTTATCAGTaGAAATCTGTTTCATCGTGG +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLPALYQ*KSVSSW
Trigger: CCACGATGAAACAGATTTCAACTGATAAAGAGCTGG...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp GTTGAGAATGAAGATGTATTAAACTCTGGCTATCTTGGAGGAGATTCCAAAGTAGTGACTGTCGAGCATTaGAAATGTAACTCATACAAC +
Preference number: 5 (lower is better)
Translates to: VENEDVLNSGYLGGDSKVVTVEH*KCNSYN
Trigger: GTTGTATGAGTTACATTTCAAATGCTCGACAGTCAC...TACTTTGGAATCTCCTCCAAGATAGCCAGAGTTTAATACATCTTCATTCTCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATTTCAGCTGGCCCGAATaGGTTTCTGTTAATTTTGAA +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYFSWPE*VSVNFE
Trigger: TTCAAAATTAACAGAAACCAATTCGGGCCAGCTGAA...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATAAAAATACTGGCAGTTaGAAACTAGCAGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYKNTGS*KLAAKS
Trigger: GCTTTTTGCTGCTAGTTTCAAACTGCCAGTATTTTT...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000360304.8
ENST00000360772.7
ENST00000418370.6
CDS-3UTR CAA 90 bp TGTTACACACACACACAGAGGAAATGTATTAGGTCTATCATCAATTATGGTCTTAGACCATCCACAATATaGTTTGAACATCTGAAGACA +
Preference number: 5 (lower is better)
Translates to: CYTHTQRKCIRSIINYGLRPSTI*FEHLKT
Trigger: TGTCTTCAGATGTTCAAACAATATTGTGGATGGTCT...AAGACCATAATTGATGATAGACCTAATACATTTCCTCTGTGTGTGTGTGTAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360304.8
ENST00000360772.7
CDS-3UTR CAA 90 bp AGAACTCTTGTTTTGGCCTTATTTTTCATGAGCGCATTCAAGTGGAGAATTTATGATAGTTTATACATCTaGGTGCGTGTTACATCCTTT +
Preference number: 5 (lower is better)
Translates to: RTLVLALFFMSAFKWRIYDSLYI*VRVTSF
Trigger: AAAGGATGTAACACGCACCAAGATGTATAAACTATC...ATAAATTCTCCACTTGAATGCGCTCATGAAAAATAAGGCCAAAACAAGAGTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS GCA 72 bp GGCAGTAGGGGAGACACGTTTGGGGGCTCCCTGTGGTaGCCACGCTGCTGGCAGTGGGCCACTCACATCTCC +
Preference number: 6 (lower is better)
Translates to: GSRGDTFGGSLW*PRCWQWATHIS
Trigger: GGAGATGTGAGTGGCCCACTGCCAGCAGCGTGGGCACCACAGGGAGCCCCCAAACGTGTCTCCCCTACTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS TCA 72 bp GGATGCCGCAATCCAGCAGGAAGCGGCCCCCGCTGGTaGTGGGTTGCCCGTTTCTGTGCCATGTCACCTGGG +
Preference number: 6 (lower is better)
Translates to: GCRNPAGSGPRW*WVARFCAMSPG
Trigger: CCCAGGTGACATGGCACAGAAACGGGCAACCCATCACCAGCGGGGGCCGCTTCCTGCTGGATTGCGGCATCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS GCA 72 bp CAATCCAGCAGGAAGCGGCCCCCGCTGGTGATGGGTTaGCCGTTTCTGTGCCATGTCACCTGGGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: QSSRKRPPLVMG*PFLCHVTWGSG
Trigger: CCCAGAGCCCCAGGTGACATGGCACAGAAACGGGCAACCCATCACCAGCGGGGGCCGCTTCCTGCTGGATTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS GCA 72 bp GGAGACACGTTTGGGGGCTCCCTGTGGTGCCCACGCTaGTGGCAGTGGGCCACTCACATCTCCAGGACCATG +
Preference number: 6 (lower is better)
Translates to: GDTFGGSLWCPR*WQWATHISRTM
Trigger: CATGGTCCTGGAGATGTGAGTGGCCCACTGCCAGCAGCGTGGGCACCACAGGGAGCCCCCAAACGTGTCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS CCA 72 bp CCCTGCCCCTTGGAGAGCTTGTGGGGCCAGCCATCCTaGCTTGCCCAGGCAGGCTTGTGGAGTTTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: PCPLESLWGQPS*LAQAGLWSFPG
Trigger: TCCTGGGAAACTCCACAAGCCTGCCTGGGCAAGCCAGGATGGCTGGCCCCACAAGCTCTCCAAGGGGCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 72 bp CGAGGGTTGGACTCAGGCGTTGTCCCTGGTTCCAGCTaGGTAGTGCGAGGGGCTGCAGGGAGTAGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: RGLDSGVVPGSS*VVRGAAGSRAQ
Trigger: CTGGGCTCTACTCCCTGCAGCCCCTCGCACTACCCAGCTGGAACCAGGGACAACGCCTGAGTCCAACCCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000418370.6
ENST00000515434.1
ENST00000578202.1
CDS CAA 72 bp GCAATCCAGCAGGAAGCGGCCCCCGCTGGTGATGGGTaGCCCGTTTCTGTGCCATGTCACCTGGGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: AIQQEAAPAGDG*PVSVPCHLGLW
Trigger: CCAGAGCCCCAGGTGACATGGCACAGAAACGGGCAACCCATCACCAGCGGGGGCCGCTTCCTGCTGGATTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS TCA 72 bp CAGGCAGATAAGCAGCCTGGGGAAGATGGTGCCGGCTaGGTGCTTTGTCCCGGGTGCCTGGCTCCCAACTGG +
Preference number: 6 (lower is better)
Translates to: QADKQPGEDGAG*VLCPGCLAPNW
Trigger: CCAGTTGGGAGCCAGGCACCCGGGACAAAGCACTCAGCCGGCACCATCTTCCCCAGGCTGCTTATCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS GCA 72 bp CAGATAAGCAGCCTGGGGAAGATGGTGCCGGCTGAGTaGTTTGTCCCGGGTGCCTGGCTCCCAACTGGCCTC +
Preference number: 6 (lower is better)
Translates to: QISSLGKMVPAE*FVPGAWLPTGL
Trigger: GAGGCCAGTTGGGAGCCAGGCACCCGGGACAAAGCACTCAGCCGGCACCATCTTCCCCAGGCTGCTTATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 72 bp AAGACTCTGCTCCTGTCCAGCCAAGCCCAGCCGGAATaGGTCCGGCTCCCACCTCTGTGCCTTCTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: KTLLLSSQAQPE*VRLPPLCLLLH
Trigger: GTGGAGGAGAAGGCACAGAGGTGGGAGCCGGACCCATTCCGGCTGGGCTTGGCTGGACAGGAGCAGAGTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS CCA 72 bp GACATTGGCCTGCCATTCACCAGGCTGCGGCCACACTaGCGTCCTTCTGGGTCCCCATGGGCCCATCTCTTG +
Preference number: 6 (lower is better)
Translates to: DIGLPFTRLRPH*RPSGSPWAHLL
Trigger: CAAGAGATGGGCCCATGGGGACCCAGAAGGACGCCAGTGTGGCCGCAGCCTGGTGAATGGCAGGCCAATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS GCA 72 bp CAAGCCCAGCCGGAATGGGTCCGGCTCCCACCTCTGTaGCTTCTCCTCCACCTGTGCAGTCCTCTTCTCTGT +
Preference number: 6 (lower is better)
Translates to: QAQPEWVRLPPL*LLLHLCSPLLC
Trigger: ACAGAGAAGAGGACTGCACAGGTGGAGGAGAAGGCACAGAGGTGGGAGCCGGACCCATTCCGGCTGGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS GCA 72 bp CCCCTTGGAGAGCTTGTGGGGCCAGCCATCCTGGCTTaGCCAGGCAGGCTTGTGGAGTTTCCCAGGATTAGG +
Preference number: 6 (lower is better)
Translates to: PLGELVGPAILA*PGRLVEFPRIR
Trigger: CCTAATCCTGGGAAACTCCACAAGCCTGCCTGGGCAAGCCAGGATGGCTGGCCCCACAAGCTCTCCAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp CGCAGAACCACCGTGTGGCCCTGCGGAGAATGCCTCTaGAGGCTCAGGCCACGTGGCAACCTTTCATGCTCT +
Preference number: 6 (lower is better)
Translates to: RRTTVWPCGECL*RLRPRGNLSCS
Trigger: AGAGCATGAAAGGTTGCCACGTGGCCTGAGCCTGCAGAGGCATTCTCCGCAGGGCCACACGGTGGTTCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp ACTGTGCGCAGAACCACCGTGTGGCCCTGCGGAGAATaGCTCTGCAGGCTCAGGCCACGTGGCAACCTTTCA +
Preference number: 6 (lower is better)
Translates to: TVRRTTVWPCGE*LCRLRPRGNLS
Trigger: TGAAAGGTTGCCACGTGGCCTGAGCCTGCAGAGGCATTCTCCGCAGGGCCACACGGTGGTTCTGCGCACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp CCAGCTGGGGTGACCTTTGAAACCTCTGGCTGCCACTaGAGAGGCTCTCAATGGAGTCCTGGGGGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: PAGVTFETSGCH*RGSQWSPGGAR
Trigger: CCTGGCTCCCCCAGGACTCCATTGAGAGCCTCTGCAGTGGCAGCCAGAGGTTTCAAAGGTCACCCCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS GCA 72 bp CAGGTGCGCAGTGAACAAGCAGCTCCTCTAGGAGGGTaGGGCACCAGGCAGGGATCGTTCTGCACTAGCCGT +
Preference number: 6 (lower is better)
Translates to: QVRSEQAAPLGG*GTRQGSFCTSR
Trigger: ACGGCTAGTGCAGAACGATCCCTGCCTGGTGCCGCACCCTCCTAGAGGAGCTGCTTGTTCACTGCGCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS GCA 72 bp CTGATCGTACAGACATTGGCCTGCCATTCACCAGGCTaGGGCCACACTGGCGTCCTTCTGGGTCCCCATGGG +
Preference number: 6 (lower is better)
Translates to: LIVQTLACHSPG*GHTGVLLGPHG
Trigger: CCCATGGGGACCCAGAAGGACGCCAGTGTGGCCGCAGCCTGGTGAATGGCAGGCCAATGTCTGTACGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CCA 72 bp CATGCAGCACAAATTCCCTGCCCCTTGGAGAGCTTGTaGGGCCAGCCATCCTGGCTTGCCCAGGCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: HAAQIPCPLESL*GQPSWLAQAGL
Trigger: CAAGCCTGCCTGGGCAAGCCAGGATGGCTGGCCCCACAAGCTCTCCAAGGGGCAGGGAATTTGTGCTGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 72 bp TTTGGGGGCTCCCTGTGGTGCCCACGCTGCTGGCAGTaGGCCACTCACATCTCCAGGACCATGACGATGTTG +
Preference number: 6 (lower is better)
Translates to: FGGSLWCPRCWQ*ATHISRTMTML
Trigger: CAACATCGTCATGGTCCTGGAGATGTGAGTGGCCCACTGCCAGCAGCGTGGGCACCACAGGGAGCCCCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS CCA 72 bp GCCATTCACCAGGCTGCGGCCACACTGGCGTCCTTCTaGGTCCCCATGGGCCCATCTCTTGGTTCACAGCTT +
Preference number: 6 (lower is better)
Translates to: AIHQAAATLASF*VPMGPSLGSQL
Trigger: AAGCTGTGAACCAAGAGATGGGCCCATGGGGACCCAGAAGGACGCCAGTGTGGCCGCAGCCTGGTGAATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 72 bp GGCCCACAGGAATGCCAGCTCCTGATCGTACAGACATaGGCCTGCCATTCACCAGGCTGCGGCCACACTGGC +
Preference number: 6 (lower is better)
Translates to: GPQECQLLIVQT*ACHSPGCGHTG
Trigger: GCCAGTGTGGCCGCAGCCTGGTGAATGGCAGGCCAATGTCTGTACGATCAGGAGCTGGCATTCCTGTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 90 bp AGTATCTGCACCAGCCTCCTTCATGCAGCACAAATTCCCTGCCCCTaGGAGAGCTTGTGGGGCCAGCCATCCTGGCTTGCCCAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: SICTSLLHAAQIPCP*ESLWGQPSWLAQAG
Trigger: GCCTGCCTGGGCAAGCCAGGATGGCTGGCCCCACAAGCTCTCCAAGGGGCAGGGAATTTGTGCTGCATGAAGGAGGCTGGTGCAGATACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp ATCCGCCCAGCTGGGGTGACCTTTGAAACCTCTGGCTaGCACTGCAGAGGCTCTCAATGGAGTCCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: IRPAGVTFETSG*HCRGSQWSPGG
Trigger: TCCCCCAGGACTCCATTGAGAGCCTCTGCAGTGGCAGCCAGAGGTTTCAAAGGTCACCCCAGCTGGGCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS CCA 72 bp TACTGCAGAGGTTCCTGTCCAAGGTCCAGCCAAGAATaGAGACCGAAGGAGTGCCGGGCGCCACAGAGCCCA +
Preference number: 6 (lower is better)
Translates to: YCRGSCPRSSQE*RPKECRAPQSP
Trigger: TGGGCTCTGTGGCGCCCGGCACTCCTTCGGTCTCCATTCTTGGCTGGACCTTGGACAGGAACCTCTGCAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS CCA 72 bp TGTATAAGCCTCTGTCCTCAGGCAGTGCCTTCTCGATaGAGACGGAGCAGAGTGAGCCGGGGGCTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: CISLCPQAVPSR*RRSRVSRGLRG
Trigger: CCCTCTCAGCCCCCGGCTCACTCTGCTCCGTCTCCATCGAGAAGGCACTGCCTGAGGACAGAGGCTTATACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510775.5
CDS TCA 72 bp GAGCCCCACAAGAGGGCCCACAGGAATGCCAGCTCCTaGTCGTACAGACATTGGCCTGCCATTCACCAGGCT +
Preference number: 6 (lower is better)
Translates to: EPHKRAHRNASS*SYRHWPAIHQA
Trigger: AGCCTGGTGAATGGCAGGCCAATGTCTGTACGATCAGGAGCTGGCATTCCTGTGGGCCCTCTTGTGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS GCA 72 bp ATCTGCACCAGCCTCCTTCATGCAGCACAAATTCCCTaGCCCTTGGAGAGCTTGTGGGGCCAGCCATCCTGG +
Preference number: 6 (lower is better)
Translates to: ICTSLLHAAQIP*PLESLWGQPSW
Trigger: CCAGGATGGCTGGCCCCACAAGCTCTCCAAGGGGCAGGGAATTTGTGCTGCATGAAGGAGGCTGGTGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp AGCAGCCATTCCCGACACTTGCCTGTCCCACAACCCTaGCCAGAGCCCTGCTTTCCCTACAGTTCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: SSHSRHLPVPQP*PEPCFPYSSLL
Trigger: GAGAAGGGAACTGTAGGGAAAGCAGGGCTCTGGGCAGGGTTGTGGGACAGGCAAGTGTCGGGAATGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CCA 72 bp TGTATAAGCCTCTGTCCTCAGGCAGTGCCTTCTCGATaGAGACGGAGCAGAGTGAGCCTGCAGAGGGGCCCT +
Preference number: 6 (lower is better)
Translates to: CISLCPQAVPSR*RRSRVSLQRGP
Trigger: AGGGCCCCTCTGCAGGCTCACTCTGCTCCGTCTCCATCGAGAAGGCACTGCCTGAGGACAGAGGCTTATACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503644.1
CDS CCA 72 bp AAGATGGTGCCGGCTGAGTGCTTTGTCCCGGGTGCCTaGCTCCCAACTGGCCTCAGTCTGAAGTCACAATGC +
Preference number: 6 (lower is better)
Translates to: KMVPAECFVPGA*LPTGLSLKSQC
Trigger: GCATTGTGACTTCAGACTGAGGCCAGTTGGGAGCCAGGCACCCGGGACAAAGCACTCAGCCGGCACCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 72 bp AGGCTGCGGCCACACTGGCGTCCTTCTGGGTCCCCATaGGCCCATCTCTTGGTTCACAGCTTGTACATGCTA +
Preference number: 6 (lower is better)
Translates to: RLRPHWRPSGSP*AHLLVHSLYML
Trigger: TAGCATGTACAAGCTGTGAACCAAGAGATGGGCCCATGGGGACCCAGAAGGACGCCAGTGTGGCCGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 72 bp TTGTGGGGCCAGCCATCCTGGCTTGCCCAGGCAGGCTaGTGGAGTTTCCCAGGATTAGGGTCTTTTGGCACC +
Preference number: 6 (lower is better)
Translates to: LWGQPSWLAQAG*WSFPGLGSFGT
Trigger: GGTGCCAAAAGACCCTAATCCTGGGAAACTCCACAAGCCTGCCTGGGCAAGCCAGGATGGCTGGCCCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CAA 90 bp CTGCGGCCACACTGGCGTCCTTCTGGGTCCCCATGGGCCCATCTCTaGGTTCACAGCTTGTACATGCTATCCCTGCTGTTTGGAGCACAC +
Preference number: 6 (lower is better)
Translates to: LRPHWRPSGSPWAHL*VHSLYMLSLLFGAH
Trigger: GTGTGCTCCAAACAGCAGGGATAGCATGTACAAGCTGTGAACCAAGAGATGGGCCCATGGGGACCCAGAAGGACGCCAGTGTGGCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 90 bp ACACCCGCCTTGAGCCCATGGGCTCCCCAATTCCAGACATCAGGATaGGGACTGATGAGGACTGTCTTCACCTGTGTGGTGTGGCGAGAC +
Preference number: 6 (lower is better)
Translates to: TPALSPWAPQFQTSG*GLMRTVFTCVVWRD
Trigger: GTCTCGCCACACCACACAGGTGAAGACAGTCCTCATCAGTCCCAATCCTGATGTCTGGAATTGGGGAGCCCATGGGCTCAAGGCGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CAA 90 bp GGCGAGTACTCACTCTCAGTTCCTAGCACGGGAGGAAGAGAGCTCTaGGGCCTCCGGGATTTCATCTCTGGGGCCTTGGTGTTCTCACTG +
Preference number: 6 (lower is better)
Translates to: GEYSLSVPSTGGREL*GLRDFISGALVFSL
Trigger: CAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCTCTTCCTCCCGTGCTAGGAACTGAGAGTGAGTACTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS TCA 72 bp CCCTGTCCTCCTCATGGACAGCATGAATCACAAGGCTaGAAGTCCCCCGGATGCCGCAATCCAGCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: PCPPHGQHESQG*KSPGCRNPAGS
Trigger: GCTTCCTGCTGGATTGCGGCATCCGGGGGACTTTCAGCCTTGTGATTCATGCTGTCCATGAGGAGGACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS TCA 72 bp CGTCCACTGGTCGATACCTTGGATGGAAAGTTCAGCTaGCATCGAGGCCTTCCCCGACCCGTTCACCACCAG +
Preference number: 6 (lower is better)
Translates to: RPLVDTLDGKFS*HRGLPRPVHHQ
Trigger: CTGGTGGTGAACGGGTCGGGGAAGGCCTCGATGTCAGCTGAACTTTCCATCCAAGGTATCGACCAGTGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS TCA 72 bp CCTTCAGGAGGTGGGAGTGCAGGGCATAGCCCTTTATaGGCAGCTCCTGCTGACCCAGTTTCCCCCAAAGCT +
Preference number: 6 (lower is better)
Translates to: PSGGGSAGHSPL*AAPADPVSPKA
Trigger: AGCTTTGGGGGAAACTGGGTCAGCAGGAGCTGCTCATAAAGGGCTATGCCCTGCACTCCCACCTCCTGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS TCA 72 bp ACACAGGAAAGAGGCTCCTGCTGGGTCTGGGCTGGATaGGTGAACAGATTCCGCCCTGGAATGAGGAAGGCG +
Preference number: 6 (lower is better)
Translates to: TQERGSCWVWAG*VNRFRPGMRKA
Trigger: CGCCTTCCTCATTCCAGGGCGGAATCTGTTCACTCATCCAGCCCAGACCCAGCAGGAGCCTCTTTCCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS GCA 72 bp CCAGGCTGGGTTCCTGTGTCGCTGGTGAGCAGTATCTaGACCAGCCTCCTTCATGCAGCACAAATTCCCTGC +
Preference number: 6 (lower is better)
Translates to: PGWVPVSLVSSI*TSLLHAAQIPC
Trigger: GCAGGGAATTTGTGCTGCATGAAGGAGGCTGGTGCAGATACTGCTCACCAGCGACACAGGAACCCAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp CAGCTTCTTCCTCGGCAGCTCTCACATGAGTCAGGATaGGAGGCAGCCACACTTCACCACCACCGTACTGCA +
Preference number: 6 (lower is better)
Translates to: QLLPRQLSHESG*EAATLHHHRTA
Trigger: TGCAGTACGGTGGTGGTGAAGTGTGGCTGCCTCGCATCCTGACTCATGTGAGAGCTGCCGAGGAAGAAGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS GCA 72 bp GTCCCCAGCTGCACAGAACTGACTTCTTGCCCACGGTaGATGGTAGGGACTCTACCATCCAGCCACACCCTA +
Preference number: 6 (lower is better)
Translates to: VPSCTELTSCPR*MVGTLPSSHTL
Trigger: TAGGGTGTGGCTGGATGGTAGAGTCCCTACCATGCACCGTGGGCAAGAAGTCAGTTCTGTGCAGCTGGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 72 bp CGTCTTCTCTGTTGTTTGTTGTGGCAACTGGGCCAGTaGGACAGGAAAGGCGTCCTGAAGCTCTCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RLLCCLLWQLGQ*DRKGVLKLSAG
Trigger: CCCAGCCGAGAGCTTCAGGACGCCTTTCCTGTCCCACTGGCCCAGTTGCCACAACAAACAACAGAGAAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000464489.5
CDS CCA 72 bp GCCCTGCGGAGAATGCCTCTGCAGGCTCAGGCCACGTaGCAACCTTTCATGCTCTTCTGGGAGATGTTACTG +
Preference number: 6 (lower is better)
Translates to: ALRRMPLQAQAT*QPFMLFWEMLL
Trigger: CAGTAACATCTCCCAGAAGAGCATGAAAGGTTGCCACGTGGCCTGAGCCTGCAGAGGCATTCTCCGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 72 bp AGGAAGAGAGCTCTTGGGCCTCCGGGATTTCATCTCTaGGGCCTTGGTGTTCTCACTGGCTGGAGCATCTCC +
Preference number: 6 (lower is better)
Translates to: RKRALGPPGFHL*GLGVLTGWSIS
Trigger: GGAGATGCTCCAGCCAGTGAGAACACCAAGGCCCCAGAGATGAAATCCCGGAGGCCCAAGAGCTCTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508240.1
CDS CCA 72 bp CTGGGTCTGGGCTGGATGAGTGAACAGATTCCGCCCTaGAATGAGGAAGGCGGCCTTCTCAGAGCAGTGTTC +
Preference number: 6 (lower is better)
Translates to: LGLGWMSEQIPP*NEEGGLLRAVF
Trigger: GAACACTGCTCTGAGAAGGCCGCCTTCCTCATTCCAGGGCGGAATCTGTTCACTCATCCAGCCCAGACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 72 bp CGGACCCGCCCTTCGAACTTGGCGGTGGCTCCTTCTTaGATGCAGAGGTTCCGAGGGGGCAAAATGAAAGCA +
Preference number: 6 (lower is better)
Translates to: RTRPSNLAVAPS*MQRFRGGKMKA
Trigger: TGCTTTCATTTTGCCCCCTCGGAACCTCTGCATCAAAGAAGGAGCCACCGCCAAGTTCGAAGGGCGGGTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS CAA 90 bp CGCTGCTGGCAGTGGGCCACTCACATCTCCAGGACCATGACGATGTaGGCCTTTTCTTCAAAGGCATCCACACACTGGACCAGCTTAGGG +
Preference number: 6 (lower is better)
Translates to: RCWQWATHISRTMTM*AFSSKASTHWTSLG
Trigger: CCCTAAGCTGGTCCAGTGTGTGGATGCCTTTGAAGAAAAGGCCAACATCGTCATGGTCCTGGAGATGTGAGTGGCCCACTGCCAGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS TCA 72 bp GAGACCCACCTTCCCATGAGGGGTGTAGCCAGGAACTaGCTTCCATGGTGGAGGAGCACAGCTGATATGTGC +
Preference number: 6 (lower is better)
Translates to: ETHLPMRGVARN*LPWWRSTADMC
Trigger: GCACATATCAGCTGTGCTCCTCCACCATGGAAGTCAGTTCCTGGCTACACCCCTCATGGGAAGGTGGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS GCA 72 bp GTCGCTGGTGAGCAGTATCTGCACCAGCCTCCTTCATaGAGCACAAATTCCCTGCCCCTTGGAGAGCTTGTG +
Preference number: 6 (lower is better)
Translates to: VAGEQYLHQPPS*STNSLPLGELV
Trigger: CACAAGCTCTCCAAGGGGCAGGGAATTTGTGCTGCATGAAGGAGGCTGGTGCAGATACTGCTCACCAGCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp GGCAGCCCTCCCTACGTAGTCAATGTCAGACCAGCCTaGTTCCTAATCAACCCGATTCTCAGACTCGGCCCT +
Preference number: 6 (lower is better)
Translates to: GSPPYVVNVRPA*FLINPILRLGP
Trigger: AGGGCCGAGTCTGAGAATCGGGTTGATTAGGAAGCAGGCTGGTCTGACATTGACTACGTAGGGAGGGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp AGAGAGAGACCCAGCTCTTCCCATGGGAGGTTACCCTaGCCTCAGGAACAGGTAAGAGGTGGTACCAGCCAT +
Preference number: 6 (lower is better)
Translates to: RERPSSSHGRLP*PQEQVRGGTSH
Trigger: ATGGCTGGTACCACCTCTTACCTGTTCCTGAGGGCAGGGTAACCTCCCATGGGAAGAGCTGGGTCTCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp GCTTTTGTTCTGACTCTGCTCGCAGATGGTGCAATTTaGCTTCCGCTGAGCAGCCAACTTCACCCGGTCCGG +
Preference number: 6 (lower is better)
Translates to: AFVLTLLADGAI*LPLSSQLHPVR
Trigger: CCGGACCGGGTGAAGTTGGCTGCTCAGCGGAAGGCAAATTGCACCATCTGCGAGCAGAGTCAGAACAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS GCA 72 bp CCAAGGTCACACAGCCTGTGGACGAGTAGCAGAGCCTaGCGATTCCACATCCTATGCCTTTGTGCCAGCCTT +
Preference number: 6 (lower is better)
Translates to: PRSHSLWTSSRA*RFHILCLCASL
Trigger: AAGGCTGGCACAAAGGCATAGGATGTGGAATCGGCAGGCTCTGCTACTCGTCCACAGGCTGTGTGACCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 72 bp ATCCCCCATGGTCACCGTCTTCTCTGTTGTTTGTTGTaGCAACTGGGCCAGTGGGACAGGAAAGGCGTCCTG +
Preference number: 6 (lower is better)
Translates to: IPHGHRLLCCLL*QLGQWDRKGVL
Trigger: CAGGACGCCTTTCCTGTCCCACTGGCCCAGTTGCCACAACAAACAACAGAGAAGACGGTGACCATGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000464489.5
CDS CCA 72 bp AAACTGAACAACTTAACTGTGCGCAGAACCACCGTGTaGCCCTGCGGAGAATGCCTCTGCAGGCTCAGGCCA +
Preference number: 6 (lower is better)
Translates to: KLNNLTVRRTTV*PCGECLCRLRP
Trigger: TGGCCTGAGCCTGCAGAGGCATTCTCCGCAGGGCCACACGGTGGTTCTGCGCACAGTTAAGTTGTTCAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CAA 72 bp CACATCCCCCATGGTCACCGTCTTCTCTGTTGTTTGTaGTGGCAACTGGGCCAGTGGGACAGGAAAGGCGTC +
Preference number: 6 (lower is better)
Translates to: HIPHGHRLLCCL*WQLGQWDRKGV
Trigger: GACGCCTTTCCTGTCCCACTGGCCCAGTTGCCACAACAAACAACAGAGAAGACGGTGACCATGGGGGATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000464489.5
CDS CAA 72 bp GTCAACTCCACTGTCACCTGGCGAGCACCACTGCCATaGGTGGCTTCACAGGTATACTTTCCCCTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: VNSTVTWRAPLP*VASQVYFPLSS
Trigger: GGAGGACAGGGGAAAGTATACCTGTGAAGCCACCAATGGCAGTGGTGCTCGCCAGGTGACAGTGGAGTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS CAA 72 bp GGCTTTTGTTCTGACTCTGCTCGCAGATGGTGCAATTaGCCTTCCGCTGAGCAGCCAACTTCACCCGGTCCG +
Preference number: 6 (lower is better)
Translates to: GFCSDSARRWCN*PSAEQPTSPGP
Trigger: CGGACCGGGTGAAGTTGGCTGCTCAGCGGAAGGCAAATTGCACCATCTGCGAGCAGAGTCAGAACAAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS CAA 72 bp TCAGGGCCAGCACTGTGCACAGACCTTCGGTTCTGTTaGGTCAGGCCTGGCTGTATGGCTGGTGAGCATCTT +
Preference number: 6 (lower is better)
Translates to: SGPALCTDLRFC*VRPGCMAGEHL
Trigger: AAGATGCTCACCAGCCATACAGCCAGGCCTGACCAAACAGAACCGAAGGTCTGTGCACAGTGCTGGCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS CAA 90 bp TTGGAGAGCTTGTGGGGCCAGCCATCCTGGCTTGCCCAGGCAGGCTaGTGGAGTTTCCCAGGATTAGGGTCTTTTGGCACCAATACTAAG +
Preference number: 6 (lower is better)
Translates to: LESLWGQPSWLAQAG*WSFPGLGSFGTNTK
Trigger: CTTAGTATTGGTGCCAAAAGACCCTAATCCTGGGAAACTCCACAAGCCTGCCTGGGCAAGCCAGGATGGCTGGCCCCACAAGCTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CAA 90 bp GGACCTCCTGAGAGCCGAGGTTCTGCCAGAGGAGCGAACCCAACCTaGCTCTGCTCAGCACTGTCAGTGTGTCAGAAGATGTTCAGAGAA +
Preference number: 6 (lower is better)
Translates to: GPPESRGSARGANPT*LCSALSVCQKMFRE
Trigger: TTCTCTGAACATCTTCTGACACACTGACAGTGCTGAGCAGAGCAAGGTTGGGTTCGCTCCTCTGGCAGAACCTCGGCTCTCAGGAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CAA 90 bp CTCAGAGGCTCAGGGCCAGCACTGTGCACAGACCTTCGGTTCTGTTaGGTCAGGCCTGGCTGTATGGCTGGTGAGCATCTTACATATCAC +
Preference number: 6 (lower is better)
Translates to: LRGSGPALCTDLRFC*VRPGCMAGEHLTYH
Trigger: GTGATATGTAAGATGCTCACCAGCCATACAGCCAGGCCTGACCAAACAGAACCGAAGGTCTGTGCACAGTGCTGGCCCTGAGCCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS CAA 90 bp TGGCGTCCTTCTGGGTCCCCATGGGCCCATCTCTTGGTTCACAGCTaGTACATGCTATCCCTGCTGTTTGGAGCACACTCCCTGAGCTTT +
Preference number: 6 (lower is better)
Translates to: WRPSGSPWAHLLVHS*YMLSLLFGAHSLSF
Trigger: AAAGCTCAGGGAGTGTGCTCCAAACAGCAGGGATAGCATGTACAAGCTGTGAACCAAGAGATGGGCCCATGGGGACCCAGAAGGACGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS TCA 72 bp CCTCAGCCAAGCAATATCCACTTAGACTCACTGCTCTaGGGACTGCCCCGCCCTGACATCAGCTTCCCTATC +
Preference number: 6 (lower is better)
Translates to: PQPSNIHLDSLL*GLPRPDISFPI
Trigger: GATAGGGAAGCTGATGTCAGGGCGGGGCAGTCCTCAGAGCAGTGAGTCTAAGTGGATATTGCTTGGCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS TCA 72 bp AGACATCAGACTTCCAGGGATTCAGGCAAGAGTGAGTaGCCAGAAAGTGGGGGCTCTGAGGCTGCCCTCAGT +
Preference number: 6 (lower is better)
Translates to: RHQTSRDSGKSE*PESGGSEAALS
Trigger: ACTGAGGGCAGCCTCAGAGCCCCCACTTTCTGGTCACTCACTCTTGCCTGAATCCCTGGAAGTCTGATGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS GCA 72 bp TCCCCCAAAGCTTGGCAGTTCCTCATTGTCCCCAGCTaGACAGAACTGACTTCTTGCCCACGGTGCATGGTA +
Preference number: 6 (lower is better)
Translates to: SPKAWQFLIVPS*TELTSCPRCMV
Trigger: TACCATGCACCGTGGGCAAGAAGTCAGTTCTGTGCAGCTGGGGACAATGAGGAACTGCCAAGCTTTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 72 bp ACTCCACTGTCACCTGGCGAGCACCACTGCCATTGGTaGCTTCACAGGTATACTTTCCCCTGTCCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: TPLSPGEHHCHW*LHRYTFPCPPH
Trigger: ATGAGGAGGACAGGGGAAAGTATACCTGTGAAGCCACCAATGGCAGTGGTGCTCGCCAGGTGACAGTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS CCA 72 bp TCAACTCCACTGTCACCTGGCGAGCACCACTGCCATTaGTGGCTTCACAGGTATACTTTCCCCTGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: STPLSPGEHHCH*WLHRYTFPCPP
Trigger: AGGAGGACAGGGGAAAGTATACCTGTGAAGCCACCAATGGCAGTGGTGCTCGCCAGGTGACAGTGGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS CCA 72 bp TCTCCCTTTTTCTTGCTTGAGGGCAATTGCCCAGGCTaGGTTCCTGTGTCGCTGGTGAGCAGTATCTGCACC +
Preference number: 6 (lower is better)
Translates to: SPFFLLEGNCPG*VPVSLVSSICT
Trigger: GGTGCAGATACTGCTCACCAGCGACACAGGAACCCAGCCTGGGCAATTGCCCTCAAGCAAGAAAAAGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 72 bp GATCGTTCTGCACTAGCCGTCCACTGGTCGATACCTTaGATGGAAAGTTCAGCTGACATCGAGGCCTTCCCC +
Preference number: 6 (lower is better)
Translates to: DRSALAVHWSIP*MESSADIEAFP
Trigger: GGGGAAGGCCTCGATGTCAGCTGAACTTTCCATCCAAGGTATCGACCAGTGGACGGCTAGTGCAGAACGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS CCA 72 bp GCACCAGGCAGGGATCGTTCTGCACTAGCCGTCCACTaGTCGATACCTTGGATGGAAAGTTCAGCTGACATC +
Preference number: 6 (lower is better)
Translates to: APGRDRSALAVH*SIPWMESSADI
Trigger: GATGTCAGCTGAACTTTCCATCCAAGGTATCGACCAGTGGACGGCTAGTGCAGAACGATCCCTGCCTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS CCA 72 bp CACTGTGGACCCTACGCATGGTGCCTAATGGATGTGTaGGCTACGGGGAAGCTGAGATCCAAAAAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: HCGPYAWCLMDV*ATGKLRSKKRE
Trigger: CTCCCTCTTTTTGGATCTCAGCTTCCCCGTAGCCCACACATCCATTAGGCACCATGCGTAGGGTCCACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS CCA 72 bp TCATCTTACAGCAGAGGGACCGTAACTCAGGGGAGTTaGACCACCATCCAAGGTCACACAGCCTGTGGACGA +
Preference number: 6 (lower is better)
Translates to: SSYSRGTVTQGS*TTIQGHTACGR
Trigger: TCGTCCACAGGCTGTGTGACCTTGGATGGTGGTCCAACTCCCCTGAGTTACGGTCCCTCTGCTGTAAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 72 bp ACTGGCGTCCTTCTGGGTCCCCATGGGCCCATCTCTTaGTTCACAGCTTGTACATGCTATCCCTGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: TGVLLGPHGPIS*FTACTCYPCCL
Trigger: CAAACAGCAGGGATAGCATGTACAAGCTGTGAACCAAGAGATGGGCCCATGGGGACCCAGAAGGACGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 72 bp TTCTCTTCAGCTGGCCCGAATTGGTTTCTGTTAATTTaGAAGAATCCTTCCCGCGCGGCGAAGGCGGCCCGG +
Preference number: 6 (lower is better)
Translates to: FSSAGPNWFLLI*KNPSRAAKAAR
Trigger: CCGGGCCGCCTTCGCCGCGCGGGAAGGATTCTTCAAAATTAACAGAAACCAATTCGGGCCAGCTGAAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000464489.5
CDS CAA 72 bp CTTCACATCCCCCATGGTCACCGTCTTCTCTGTTGTTaGTTGTGGCAACTGGGCCAGTGGGACAGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: LHIPHGHRLLCC*LWQLGQWDRKG
Trigger: GCCTTTCCTGTCCCACTGGCCCAGTTGCCACAACAAACAACAGAGAAGACGGTGACCATGGGGGATGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000464489.5
CDS CAA 72 bp CTGAACTGCAGCAGAGGCAGCCGGGAGCCACCTTGTTaGACTGTAGGTCATAAGAGCCCCATTCCAGAGAGA +
Preference number: 6 (lower is better)
Translates to: LNCSRGSREPPC*TVGHKSPIPER
Trigger: TCTCTCTGGAATGGGGCTCTTATGACCTACAGTCAAACAAGGTGGCTCCCGGCTGCCTCTGCTGCAGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360772.7
CDS CAA 72 bp ACTTCCCGCCCTTCGAACTTGGCGGTGGCTCCTTCTTaGATGCAGAGGTTCCGAGGGGGCAAAATGAAAGCA +
Preference number: 6 (lower is better)
Translates to: TSRPSNLAVAPS*MQRFRGGKMKA
Trigger: TGCTTTCATTTTGCCCCCTCGGAACCTCTGCATCAAAGAAGGAGCCACCGCCAAGTTCGAAGGGCGGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464489.5
CDS CAA 72 bp TCTGGGTCCCCATGGGCCCATCTCTTGGTTCACAGCTaGTACATGCTATCCCTGCTGTTTGGAGCACACTCC +
Preference number: 6 (lower is better)
Translates to: SGSPWAHLLVHS*YMLSLLFGAHS
Trigger: GGAGTGTGCTCCAAACAGCAGGGATAGCATGTACAAGCTGTGAACCAAGAGATGGGCCCATGGGGACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 72 bp CACTGGCGTCCTTCTGGGTCCCCATGGGCCCATCTCTaGGTTCACAGCTTGTACATGCTATCCCTGCTGTTT +
Preference number: 6 (lower is better)
Translates to: HWRPSGSPWAHL*VHSLYMLSLLF
Trigger: AAACAGCAGGGATAGCATGTACAAGCTGTGAACCAAGAGATGGGCCCATGGGGACCCAGAAGGACGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 90 bp AGGGGCATGGAGTCAACTCTTGAGGGATCCACACTGAGGGAGGTTTaGGAAATGTGTGACGAGGCAACCAGCTTCACATCCCCCATGGTC +
Preference number: 6 (lower is better)
Translates to: RGMESTLEGSTLREV*EMCDEATSFTSPMV
Trigger: GACCATGGGGGATGTGAAGCTGGTTGCCTCGTCACACATTTCCAAAACCTCCCTCAGTGTGGATCCCTCAAGAGTTGACTCCATGCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000464489.5
ENST00000506361.5
ENST00000510571.1
CDS CAA 90 bp CCTTCTACTGTCAACTCCACTGTCACCTGGCGAGCACCACTGCCATaGGTGGCTTCACAGGTATACTTTCCCCTGTCCTCCTCATGGACA +
Preference number: 6 (lower is better)
Translates to: PSTVNSTVTWRAPLP*VASQVYFPLSSSWT
Trigger: TGTCCATGAGGAGGACAGGGGAAAGTATACCTGTGAAGCCACCAATGGCAGTGGTGCTCGCCAGGTGACAGTGGAGTTGACAGTAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS CAA 90 bp AAGTTAAGGGGCTTTTGTTCTGACTCTGCTCGCAGATGGTGCAATTaGCCTTCCGCTGAGCAGCCAACTTCACCCGGTCCGGGAGATCTG +
Preference number: 6 (lower is better)
Translates to: KLRGFCSDSARRWCN*PSAEQPTSPGPGDL
Trigger: CAGATCTCCCGGACCGGGTGAAGTTGGCTGCTCAGCGGAAGGCAAATTGCACCATCTGCGAGCAGAGTCAGAACAAAAGCCCCTTAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS TCA 72 bp CAGGTATACTTTCCCCTGTCCTCCTCATGGACAGCATaGATCACAAGGCTGAAAGTCCCCCGGATGCCGCAA +
Preference number: 6 (lower is better)
Translates to: QVYFPLSSSWTA*ITRLKVPRMPQ
Trigger: TTGCGGCATCCGGGGGACTTTCAGCCTTGTGATTCATGCTGTCCATGAGGAGGACAGGGGAAAGTATACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS TCA 72 bp CCCAGCTACTCAGGAGGCCGAGTCGAGAAGATTGCTTaGGCCCACGAGGTTGAGACTGCAGTAAGCTATGAT +
Preference number: 6 (lower is better)
Translates to: PSYSGGRVEKIA*AHEVETAVSYD
Trigger: ATCATAGCTTACTGCAGTCTCAACCTCGTGGGCTCAAGCAATCTTCTCGACTCGGCCTCCTGAGTAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS TCA 72 bp CTCAACACTTCGGGCAGCCAACGCAGCAGCATCGCTTaGGGCCAGGAGTTCAAGACTAGTCTAGGCAACATA +
Preference number: 6 (lower is better)
Translates to: LNTSGSQRSSIA*GQEFKTSLGNI
Trigger: TATGTTGCCTAGACTAGTCTTGAACTCCTGGCCTCAAGCGATGCTGCTGCGTTGGCTGCCCGAAGTGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS TCA 72 bp AAAGGTGTCCCATGGAGAGAGGTGCCAGAGAAGGCATaGAGGAAGGAACTTGGGGGCTGTGTAGTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: KGVPWREVPEKA*RKELGGCVVCS
Trigger: ACTGCACACTACACAGCCCCCAAGTTCCTTCCTTCATGCCTTCTCTGGCACCTCTCTCCATGGGACACCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS GCA 72 bp CATGCCTCCTGCCATCCTTGCTGCAGACTGCTCTCATaGACTTTGGACAGACATTTCACCTTGCTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: HASCHPCCRLLS*TLDRHFTLLCP
Trigger: GGGACAGAGCAAGGTGAAATGTCTGTCCAAAGTGCATGAGAGCAGTCTGCAGCAAGGATGGCAGGAGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp CGAGGTTCTGCCAGAGGAGCGAACCCAACCTTGCTCTaGTCAGCACTGTCAGTGTGTCAGAAGATGTTCAGA +
Preference number: 6 (lower is better)
Translates to: RGSARGANPTLL*SALSVCQKMFR
Trigger: TCTGAACATCTTCTGACACACTGACAGTGCTGAGCAGAGCAAGGTTGGGTTCGCTCCTCTGGCAGAACCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp TACGGGGAAGCTGAGATCCAAAAAGAGGGAGGTAGCTaGCTATGGTCACGGAGAGGCTCCTTTCTCTCTTGG +
Preference number: 6 (lower is better)
Translates to: YGEAEIQKEGGS*LWSRRGSFLSW
Trigger: CCAAGAGAGAAAGGAGCCTCTCCGTGACCATAGGCAGCTACCTCCCTCTTTTTGGATCTCAGCTTCCCCGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS GCA 72 bp TGGACGAGTAGCAGAGCCTGCCGATTCCACATCCTATaGCTTTGTGCCAGCCTTCCTTTGAGGGCCTCATAT +
Preference number: 6 (lower is better)
Translates to: WTSSRACRFHIL*LCASLPLRASY
Trigger: ATATGAGGCCCTCAAAGGAAGGCTGGCACAAAGGCATAGGATGTGGAATCGGCAGGCTCTGCTACTCGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS GCA 72 bp CCCGAAATGGCTTCCCTGCCCCTCTATTCTAATCAGTaGCTTCCTGTTGTCCTTCCTCACAGACGCATCCCA +
Preference number: 6 (lower is better)
Translates to: PEMASLPLYSNQ*LPVVLPHRRIP
Trigger: TGGGATGCGTCTGTGAGGAAGGACAACAGGAAGGCACTGATTAGAATAGAGGGGCAGGGAAGCCATTTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CCA 72 bp ACAAAGTGTAGAGAGAGAGAGACCCAGCTCTTCCCATaGGAGGTTACCCTGCCCTCAGGAACAGGTAAGAGG +
Preference number: 6 (lower is better)
Translates to: TKCRERETQLFP*EVTLPSGTGKR
Trigger: CCTCTTACCTGTTCCTGAGGGCAGGGTAACCTCCCATGGGAAGAGCTGGGTCTCTCTCTCTCTACACTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 72 bp GAGAAAAGGCCACTGGCTCTGTTATTGGGAGTTCACTaGGCACTTCAGGGTGTGGGCAGACATCAGACTTCC +
Preference number: 6 (lower is better)
Translates to: EKRPLALLLGVH*ALQGVGRHQTS
Trigger: GGAAGTCTGATGTCTGCCCACACCCTGAAGTGCCCAGTGAACTCCCAATAACAGAGCCAGTGGCCTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS CAA 72 bp CAGTGGGCCACTCACATCTCCAGGACCATGACGATGTaGGCCTTTTCTTCAAAGGCATCCACACACTGGACC +
Preference number: 6 (lower is better)
Translates to: QWATHISRTMTM*AFSSKASTHWT
Trigger: GGTCCAGTGTGTGGATGCCTTTGAAGAAAAGGCCAACATCGTCATGGTCCTGGAGATGTGAGTGGCCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS CAA 90 bp GACTTAGCTATCATCTTACAGCAGAGGGACCGTAACTCAGGGGAGTaGGACCACCATCCAAGGTCACACAGCCTGTGGACGAGTAGCAGA +
Preference number: 6 (lower is better)
Translates to: DLAIILQQRDRNSGE*DHHPRSHSLWTSSR
Trigger: TCTGCTACTCGTCCACAGGCTGTGTGACCTTGGATGGTGGTCCAACTCCCCTGAGTTACGGTCCCTCTGCTGTAAGATGATAGCTAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS TCA 72 bp TCGGTTCTGTTTGGTCAGGCCTGGCTGTATGGCTGGTaGGCATCTTACATATCACACTCCTGTCTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: SVLFGQAWLYGW*ASYISHSCLQC
Trigger: GCACTGCAGACAGGAGTGTGATATGTAAGATGCTCACCAGCCATACAGCCAGGCCTGACCAAACAGAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513111.1
CDS GCA 72 bp GACTGCTCTCATGCACTTTGGACAGACATTTCACCTTaGTCTGTCCCCTGGCCATCCCTTCTCACACACATC +
Preference number: 6 (lower is better)
Translates to: DCSHALWTDISP*SVPWPSLLTHI
Trigger: GATGTGTGTGAGAAGGGATGGCCAGGGGACAGAGCAAGGTGAAATGTCTGTCCAAAGTGCATGAGAGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp TTAAGGGGCTTTTGTTCTGACTCTGCTCGCAGATGGTaGAATTTGCCTTCCGCTGAGCAGCCAACTTCACCC +
Preference number: 6 (lower is better)
Translates to: LRGFCSDSARRW*NLPSAEQPTSP
Trigger: GGGTGAAGTTGGCTGCTCAGCGGAAGGCAAATTGCACCATCTGCGAGCAGAGTCAGAACAAAAGCCCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS CCA 72 bp GCAAAACTTCCTTCTACTGTCAACTCCACTGTCACCTaGCGAGCACCACTGCCATTGGTGGCTTCACAGGTA +
Preference number: 6 (lower is better)
Translates to: AKLPSTVNSTVT*RAPLPLVASQV
Trigger: TACCTGTGAAGCCACCAATGGCAGTGGTGCTCGCCAGGTGACAGTGGAGTTGACAGTAGAAGGAAGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000506361.5
ENST00000510571.1
CDS CCA 72 bp ACTGGGGAGAAATTAGGAGGAGCTCTCCTAGAGTCTTaGTGGGAAGTGAAAGGGCATGAAGGAGGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: TGEKLGGALLES*WEVKGHEGGWA
Trigger: TGCCCAACCTCCTTCATGCCCTTTCACTTCCCACCAAGACTCTAGGAGAGCTCCTCCTAATTTCTCCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS CAA 90 bp CCTTGCTGCAGACTGCTCTCATGCACTTTGGACAGACATTTCACCTaGCTCTGTCCCCTGGCCATCCCTTCTCACACACATCACACTGTA +
Preference number: 6 (lower is better)
Translates to: PCCRLLSCTLDRHFT*LCPLAIPSHTHHTV
Trigger: TACAGTGTGATGTGTGTGAGAAGGGATGGCCAGGGGACAGAGCAAGGTGAAATGTCTGTCCAAAGTGCATGAGAGCAGTCTGCAGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CAA 90 bp CGGAGAGGCTCCTTTCTCTCTTGGCTTTTTATACCACACTGCGATTaGACTCTAAGAGAAACTGGGAAGGGCCTTCCACGAGCAAGGCGC +
Preference number: 6 (lower is better)
Translates to: RRGSFLSWLFIPHCD*TLRETGKGLPRARR
Trigger: GCGCCTTGCTCGTGGAAGGCCCTTCCCAGTTTCTCTTAGAGTCAAATCGCAGTGTGGTATAAAAAGCCAAGAGAGAAAGGAGCCTCTCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS CAA 90 bp CCGAAATGGCTTCCCTGCCCCTCTATTCTAATCAGTGCCTTCCTGTaGTCCTTCCTCACAGACGCATCCCAGTTGGTAATGTGCGTTCGT +
Preference number: 6 (lower is better)
Translates to: PKWLPCPSILISAFL*SFLTDASQLVMCVR
Trigger: ACGAACGCACATTACCAACTGGGATGCGTCTGTGAGGAAGGACAACAGGAAGGCACTGATTAGAATAGAGGGGCAGGGAAGCCATTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 90 bp AAAGCCCACAAGTTAAGGGCAAGTAAGAGCATCTTTCTCTGCAGTTaGCCCAGTTTCCCAAGCCACAGCACAAGCAGCCATTCCCGACAC +
Preference number: 6 (lower is better)
Translates to: KAHKLRASKSIFLCS*PSFPSHSTSSHSRH
Trigger: GTGTCGGGAATGGCTGCTTGTGCTGTGGCTTGGGAAACTGGGCAAACTGCAGAGAAAGATGCTCTTACTTGCCCTTAACTTGTGGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS GCA 72 bp TTTGCTTCCAGTGTGCATGCGGAAACCCTGTTAATCTaGTCAACCTACCTGCCCCCATTGCTACACCTTTCC +
Preference number: 6 (lower is better)
Translates to: FASSVHAETLLI*STYLPPLLHLS
Trigger: GGAAAGGTGTAGCAATGGGGGCAGGTAGGTTGAGCAGATTAACAGGGTTTCCGCATGCACACTGGAAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp TGTGTGCGTGTGTGTATGGTTAAAGAGGAGACCTACTaGAGTGAGCGGGATGACCTTACTGTCATGCCTCCT +
Preference number: 6 (lower is better)
Translates to: CVRVCMVKEETY*SERDDLTVMPP
Trigger: AGGAGGCATGACAGTAAGGTCATCCCGCTCACTGCAGTAGGTCTCCTCTTTAACCATACACACACGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 72 bp CAGGCTCAGGCCACGTGGCAACCTTTCATGCTCTTCTaGGAGATGTTACTGGTTCAACCTGTTTGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: QAQATWQPFMLF*EMLLVQPVCCA
Trigger: AGCACAACAAACAGGTTGAACCAGTAACATCTCCCAGAAGAGCATGAAAGGTTGCCACGTGGCCTGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 72 bp CTGAGAGAGGGAGGAAACAGCCTCTTCATAGGCAAATaGCTTGTACTCGTTGCATCTCAAACTCTGCCGGCA +
Preference number: 6 (lower is better)
Translates to: LREGGNSLFIGK*LVLVASQTLPA
Trigger: TGCCGGCAGAGTTTGAGATGCAACGAGTACAAGCCATTTGCCTATGAAGAGGCTGTTTCCTCCCTCTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CCA 72 bp GTGATGAGATCAGAGTTACAATCCAGAAAGAGCCCCTaGGAGGGCAGGATCAACTGGGGAGAAATTAGGAGG +
Preference number: 6 (lower is better)
Translates to: VMRSELQSRKSP*EGRINWGEIRR
Trigger: CCTCCTAATTTCTCCCCAGTTGATCCTGCCCTCCCAGGGGCTCTTTCTGGATTGTAACTCTGATCTCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS CCA 72 bp GAAGAACTCAGGGATGAGAGACTTTTCAGAGGAGTTTaGCAGAAAGGTGTCCCATGGAGAGAGGTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: EELRDERLFRGV*QKGVPWREVPE
Trigger: CTCTGGCACCTCTCTCCATGGGACACCTTTCTGCCAAACTCCTCTGAAAAGTCTCTCATCCCTGAGTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS CAA 72 bp GAGTCAACTCTTGAGGGATCCACACTGAGGGAGGTTTaGGAAATGTGTGACGAGGCAACCAGCTTCACATCC +
Preference number: 6 (lower is better)
Translates to: ESTLEGSTLREV*EMCDEATSFTS
Trigger: GGATGTGAAGCTGGTTGCCTCGTCACACATTTCCAAAACCTCCCTCAGTGTGGATCCCTCAAGAGTTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346322.9
ENST00000360304.8
ENST00000360772.7
ENST00000464489.5
ENST00000506361.5
ENST00000510571.1
CDS CAA 72 bp AGACTGCTCTCATGCACTTTGGACAGACATTTCACCTaGCTCTGTCCCCTGGCCATCCCTTCTCACACACAT +
Preference number: 6 (lower is better)
Translates to: RLLSCTLDRHFT*LCPLAIPSHTH
Trigger: ATGTGTGTGAGAAGGGATGGCCAGGGGACAGAGCAAGGTGAAATGTCTGTCCAAAGTGCATGAGAGCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CAA 72 bp CTTCCCTGCCCCTCTATTCTAATCAGTGCCTTCCTGTaGTCCTTCCTCACAGACGCATCCCAGTTGGTAATG +
Preference number: 6 (lower is better)
Translates to: LPCPSILISAFL*SFLTDASQLVM
Trigger: CATTACCAACTGGGATGCGTCTGTGAGGAAGGACAACAGGAAGGCACTGATTAGAATAGAGGGGCAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 90 bp GAGATCATTGCCATAGAGGACAGTCTTCCAATGGCTCTCACAGCATaGCCCGTTTTCTGGAAAATAGACACGAGGGTTGGACTCAGGCGT +
Preference number: 6 (lower is better)
Translates to: EIIAIEDSLPMALTA*PVFWKIDTRVGLRR
Trigger: ACGCCTGAGTCCAACCCTCGTGTCTATTTTCCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACTGTCCTCTATGGCAATGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418370.6
ENST00000515434.1
ENST00000578202.1
CDS TCA 72 bp TCCATGTTCTTGGTATCTTTCATTAGCCATGGATGCTaGAGGCACTGCGTGCAGTCCAGGCGGTTTAGGATG +
Preference number: 6 (lower is better)
Translates to: SMFLVSFISHGC*RHCVQSRRFRM
Trigger: CATCCTAAACCGCCTGGACTGCACGCAGTGCCTTCAGCATCCATGGCTAATGAAAGATACCAAGAACATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360772.7
CDS GCA 72 bp CACTTAAACTCCACACTTGTGGCCCCCATTCGCCTTTaGTCCCTCTTTCAACCTCTGAGTGACACTCTACTT +
Preference number: 6 (lower is better)
Translates to: HLNSTLVAPIRL*SLFQPLSDTLL
Trigger: AAGTAGAGTGTCACTCAGAGGTTGAAAGAGGGAGCAAAGGCGAATGGGGGCCACAAGTGTGGAGTTTAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS GCA 72 bp GAATCAAAGAAAGTGGGAGGCACAGTTTGTTTTGACTaGTGTACTGTGCTATGCGGCCTCGGGAAAGTTGCC +
Preference number: 6 (lower is better)
Translates to: ESKKVGGTVCFD*CTVLCGLGKVA
Trigger: GGCAACTTTCCCGAGGCCGCATAGCACAGTACAGCAGTCAAAACAAACTGTGCCTCCCACTTTCTTTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS GCA 72 bp CAGGTTCTGTCCTTTGGGCTTCTTAATAGTGGCTGGTaGTACCATACCCTGAGGGCATGGAATCTGTTTCTG +
Preference number: 6 (lower is better)
Translates to: QVLSFGLLNSGW*YHTLRAWNLFL
Trigger: CAGAAACAGATTCCATGCCCTCAGGGTATGGTAGCACCAGCCACTATTAAGAAGCCCAAAGGACAGAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CCA 72 bp AGTCTTCCAATGGCTCTCACAGCATTGCCCGTTTTCTaGAAAATAGACACGAGGGTTGGACTCAGGCGTTGT +
Preference number: 6 (lower is better)
Translates to: SLPMALTALPVF*KIDTRVGLRRC
Trigger: ACAACGCCTGAGTCCAACCCTCGTGTCTATTTTCCAGAAAACGGGCAATGCTGTGAGAGCCATTGGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418370.6
ENST00000515434.1
ENST00000578202.1
CDS CCA 72 bp AAGTTAAGGGGCTTTTGTTCTGACTCTGCTCGCAGATaGTGCAATTTGCCTTCCGCTGAGCAGCCAACTTCA +
Preference number: 6 (lower is better)
Translates to: KLRGFCSDSARR*CNLPSAEQPTS
Trigger: TGAAGTTGGCTGCTCAGCGGAAGGCAAATTGCACCATCTGCGAGCAGAGTCAGAACAAAAGCCCCTTAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506361.5
CDS CCA 72 bp TTTTATACCACACTGCGATTTGACTCTAAGAGAAACTaGGAAGGGCCTTCCACGAGCAAGGCGCAGCATGTG +
Preference number: 6 (lower is better)
Translates to: FYTTLRFDSKRN*EGPSTSKAQHV
Trigger: CACATGCTGCGCCTTGCTCGTGGAAGGCCCTTCCCAGTTTCTCTTAGAGTCAAATCGCAGTGTGGTATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS CCA 72 bp GAAGCTGAGATCCAAAAAGAGGGAGGTAGCTGCCTATaGTCACGGAGAGGCTCCTTTCTCTCTTGGCTTTTT +
Preference number: 6 (lower is better)
Translates to: EAEIQKEGGSCL*SRRGSFLSWLF
Trigger: AAAAAGCCAAGAGAGAAAGGAGCCTCTCCGTGACCATAGGCAGCTACCTCCCTCTTTTTGGATCTCAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS CCA 72 bp GCTCTGTCATTTCATGCGGATCTGGTTGTTAAAACGTaGCACGTCCTTCTCTCTCGCTCTCTCACTTGCCAT +
Preference number: 6 (lower is better)
Translates to: ALSFHADLVVKT*HVLLSRSLTCH
Trigger: ATGGCAAGTGAGAGAGCGAGAGAGAAGGACGTGCCACGTTTTAACAACCAGATCCGCATGAAATGACAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CAA 72 bp CATCACGGCAAGCCCTTCACATCTGAACTTGACAGTTaGATTTTCCTTGACCTCCTGGCTTTGGGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: HHGKPFTSELDS*IFLDLLALGLA
Trigger: AGCAAGCCCCAAAGCCAGGAGGTCAAGGAAAATCAAACTGTCAAGTTCAGATGTGAAGGGCTTGCCGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346322.9
ENST00000514623.1
CDS CAA 72 bp CGATTCCACATCCTATGCCTTTGTGCCAGCCTTCCTTaGAGGGCCTCATATGGGCAAGTCACATGCTTTTCA +
Preference number: 6 (lower is better)
Translates to: RFHILCLCASLP*RASYGQVTCFS
Trigger: TGAAAAGCATGTGACTTGCCCATATGAGGCCCTCAAAGGAAGGCTGGCACAAAGGCATAGGATGTGGAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CAA 90 bp AAAAGCTGTGCATCTAGACAACAGATGTCACCACAGACTGGCTACTaGTCCTCCCTGAGAGAGGGAGGAAACAGCCTCTTCATAGGCAAA +
Preference number: 6 (lower is better)
Translates to: KSCASRQQMSPQTGY*SSLREGGNSLFIGK
Trigger: TTTGCCTATGAAGAGGCTGTTTCCTCCCTCTCTCAGGGAGGACAAGTAGCCAGTCTGTGGTGACATCTGTTGTCTAGATGCACAGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CAA 90 bp TGGGTGATAACCCACCACCCTGGTTGGCAGGTGAAAGTCACAGACTaGAAGCAAAGAGCCTGTCTTATCTTGTCCCTTCTCTTTCTAGAC +
Preference number: 6 (lower is better)
Translates to: WVITHHPGWQVKVTD*KQRACLILSLLFLD
Trigger: GTCTAGAAAGAGAAGGGACAAGATAAGACAGGCTCTTTGCTTCAAGTCTGTGACTTTCACCTGCCAACCAGGGTGGTGGGTTATCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CAA 90 bp CCTCATGAATGTCTTGGTGCCCTTCCCGAGGTAATGGGTGAGTTATaGCTCTGTCATTTCATGCGGATCTGGTTGTTAAAACGTGGCACG +
Preference number: 6 (lower is better)
Translates to: PHECLGALPEVMGEL*LCHFMRIWLLKRGT
Trigger: CGTGCCACGTTTTAACAACCAGATCCGCATGAAATGACAGAGCAATAACTCACCCATTACCTCGGGAAGGGCACCAAGACATTCATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS GCA 72 bp AGTCTGAAGTCACAATGCATGCACTCTCTCTGTACCTaGCAGTCCCACAACTTTTCCCTTTGCTCTGTGACA +
Preference number: 6 (lower is better)
Translates to: SLKSQCMHSLCT*QSHNFSLCSVT
Trigger: TGTCACAGAGCAAAGGGAAAAGTTGTGGGACTGGCAGGTACAGAGAGAGTGCATGCATTGTGACTTCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 72 bp TTTGGTCAGACCAAAATGGGTGATAACCCACCACCCTaGTTGGCAGGTGAAAGTCACAGACTTGAAGCAAAG +
Preference number: 6 (lower is better)
Translates to: FGQTKMGDNPPP*LAGESHRLEAK
Trigger: CTTTGCTTCAAGTCTGTGACTTTCACCTGCCAACCAGGGTGGTGGGTTATCACCCATTTTGGTCTGACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 72 bp CTTCAGGTTCTGTCCTTTGGGCTTCTTAATAGTGGCTaGTGCTACCATACCCTGAGGGCATGGAATCTGTTT +
Preference number: 6 (lower is better)
Translates to: LQVLSFGLLNSG*CYHTLRAWNLF
Trigger: AAACAGATTCCATGCCCTCAGGGTATGGTAGCACCAGCCACTATTAAGAAGCCCAAAGGACAGAACCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 72 bp AAGTTAAGGGCAAGTAAGAGCATCTTTCTCTGCAGTTaGCCCAGTTTCCCAAGCCACAGCACAAGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: KLRASKSIFLCS*PSFPSHSTSSH
Trigger: ATGGCTGCTTGTGCTGTGGCTTGGGAAACTGGGCAAACTGCAGAGAAAGATGCTCTTACTTGCCCTTAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS GCA 72 bp AAACAGCCTCTTCATAGGCAAATGGCTTGTACTCGTTaGATCTCAAACTCTGCCGGCAAAGCCATTTTCCTC +
Preference number: 6 (lower is better)
Translates to: KQPLHRQMACTR*ISNSAGKAIFL
Trigger: GAGGAAAATGGCTTTGCCGGCAGAGTTTGAGATGCAACGAGTACAAGCCATTTGCCTATGAAGAGGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS GCA 72 bp AAGTGGGAGGCACAGTTTGTTTTGACTGCTGTACTGTaGTATGCGGCCTCGGGAAAGTTGCCTAATAAACTT +
Preference number: 6 (lower is better)
Translates to: KWEAQFVLTAVL*YAASGKLPNKL
Trigger: AAGTTTATTAGGCAACTTTCCCGAGGCCGCATAGCACAGTACAGCAGTCAAAACAAACTGTGCCTCCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CCA 72 bp GACCAGGTCCGTTCTATCCATACACACCCATGGCTATaGAGAACTATCCGGATAGTTTATACATCTTGGTGC +
Preference number: 6 (lower is better)
Translates to: DQVRSIHTHPWL*RTIRIVYTSWC
Trigger: GCACCAAGATGTATAAACTATCCGGATAGTTCTCCATAGCCATGGGTGTGTATGGATAGAACGGACCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS CCA 72 bp GGTTGCGACCAGGTCCGTTCTATCCATACACACCCATaGCTATGGAGAACTATCCGGATAGTTTATACATCT +
Preference number: 6 (lower is better)
Translates to: GCDQVRSIHTHP*LWRTIRIVYTS
Trigger: AGATGTATAAACTATCCGGATAGTTCTCCATAGCCATGGGTGTGTATGGATAGAACGGACCTGGTCGCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418370.6
CDS CCA 72 bp GCTTCTGCTATGATTAAAAGCATCCTGAGGCCTCACTaGATGCAGATACTGGCACCAAGCCAAATAAGCTTC +
Preference number: 6 (lower is better)
Translates to: ASAMIKSILRPH*MQILAPSQISF
Trigger: GAAGCTTATTTGGCTTGGTGCCAGTATCTGCATCCAGTGAGGCCTCAGGATGCTTTTAATCATAGCAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS TCA 72 bp CTTCAGTCTCCTTCTCTAGGAGGGGGCTGGACAAGATaGTCTCCAAGGTCCCATTTAGCTCTGTTTATAATT +
Preference number: 6 (lower is better)
Translates to: LQSPSLGGGWTR*SPRSHLALFII
Trigger: AATTATAAACAGAGCTAAATGGGACCTTGGAGATCATCTTGTCCAGCCCCCTCCTAGAGAAGGAGACTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS TCA 72 bp TTGGGCTTCTTAATAGTGGCTGGTGCTACCATACCCTaGGGGCATGGAATCTGTTTCTGTTCACTAAACAGA +
Preference number: 6 (lower is better)
Translates to: LGFLIVAGATIP*GHGICFCSLNR
Trigger: TCTGTTTAGTGAACAGAAACAGATTCCATGCCCTCAGGGTATGGTAGCACCAGCCACTATTAAGAAGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS GCA 72 bp AGAGGCTCCTTTCTCTCTTGGCTTTTTATACCACACTaGGATTTGACTCTAAGAGAAACTGGGAAGGGCCTT +
Preference number: 6 (lower is better)
Translates to: RGSFLSWLFIPH*DLTLRETGKGL
Trigger: AAGGCCCTTCCCAGTTTCTCTTAGAGTCAAATCGCAGTGTGGTATAAAAAGCCAAGAGAGAAAGGAGCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS GCA 72 bp AGCCTTCCTTTGAGGGCCTCATATGGGCAAGTCACATaGTTTTCAGCAGTTTGCAAAGCTCATTTCACTAAG +
Preference number: 6 (lower is better)
Translates to: SLPLRASYGQVT*FSAVCKAHFTK
Trigger: CTTAGTGAAATGAGCTTTGCAAACTGCTGAAAAGCATGTGACTTGCCCATATGAGGCCCTCAAAGGAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CAA 72 bp TCCTTTCTCTCTTGGCTTTTTATACCACACTGCGATTaGACTCTAAGAGAAACTGGGAAGGGCCTTCCACGA +
Preference number: 6 (lower is better)
Translates to: SFLSWLFIPHCD*TLRETGKGLPR
Trigger: TCGTGGAAGGCCCTTCCCAGTTTCTCTTAGAGTCAAATCGCAGTGTGGTATAAAAAGCCAAGAGAGAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504946.5
CDS CAA 72 bp GGTGAAGAGAAGCACAGCTACAACTTACCTTCAATCTaGCAGTCAAATCTAGCAGCACTTCCCTCCACAACT +
Preference number: 6 (lower is better)
Translates to: GEEKHSYNLPSI*QSNLAALPSTT
Trigger: AGTTGTGGAGGGAAGTGCTGCTAGATTTGACTGCAAGATTGAAGGTAAGTTGTAGCTGTGCTTCTCTTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CAA 72 bp TGTCTTGGTGCCCTTCCCGAGGTAATGGGTGAGTTATaGCTCTGTCATTTCATGCGGATCTGGTTGTTAAAA +
Preference number: 6 (lower is better)
Translates to: CLGALPEVMGEL*LCHFMRIWLLK
Trigger: TTTTAACAACCAGATCCGCATGAAATGACAGAGCAATAACTCACCCATTACCTCGGGAAGGGCACCAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CAA 72 bp GTCATCTATACCCAGCCTAGCTTTGCTTGTAGGGATTaGTTCCCATGTCACTTCATTCCTTCTAGGGCTTTT +
Preference number: 6 (lower is better)
Translates to: VIYTQPSFACRD*FPCHFIPSRAF
Trigger: AAAAGCCCTAGAAGGAATGAAGTGACATGGGAACAAATCCCTACAAGCAAAGCTAGGCTGGGTATAGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CAA 90 bp CCTATTCATGGTGAAGAGAAGCACAGCTACAACTTACCTTCAATCTaGCAGTCAAATCTAGCAGCACTTCCCTCCACAACTTCTAAATCG +
Preference number: 6 (lower is better)
Translates to: PIHGEEKHSYNLPSI*QSNLAALPSTTSKS
Trigger: CGATTTAGAAGTTGTGGAGGGAAGTGCTGCTAGATTTGACTGCAAGATTGAAGGTAAGTTGTAGCTGTGCTTCTCTTCACCATGAATAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS TCA 72 bp ATGGAATGGGGCCTGGAACTGATGTGTGCGTTAATGTaGCTAAACAAGGTCAACATGAGACAAAAACCCTTT +
Preference number: 6 (lower is better)
Translates to: MEWGLELMCALM*LNKVNMRQKPF
Trigger: AAAGGGTTTTTGTCTCATGTTGACCTTGTTTAGTCACATTAACGCACACATCAGTTCCAGGCCCCATTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000418370.6
ENST00000515434.1
ENST00000583087.5
CDS CCA 72 bp CTTAATAGTGGCTGGTGCTACCATACCCTGAGGGCATaGAATCTGTTTCTGTTCACTAAACAGAAGGAAAAA +
Preference number: 6 (lower is better)
Translates to: LNSGWCYHTLRA*NLFLFTKQKEK
Trigger: TTTTTCCTTCTGTTTAGTGAACAGAAACAGATTCCATGCCCTCAGGGTATGGTAGCACCAGCCACTATTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS TCA 72 bp ACACTGAGTTTTCCAGTCTCAATACTGACAGCAACCTaGGATAGAACCCGTGTGTCATATTACAATAGGAGA +
Preference number: 6 (lower is better)
Translates to: TLSFPVSILTAT*DRTRVSYYNRR
Trigger: TCTCCTATTGTAATATGACACACGGGTTCTATCTCAGGTTGCTGTCAGTATTGAGACTGGAAAACTCAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514623.1
CDS CAA 72 bp GCTGTTACCAGGGAAGCTACTCTTCAGGGAAACTACTaGTTGAATGGAATTTTTGTGGACAACTTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: AVTREATLQGNY*LNGIFVDNFCV
Trigger: CACACAAAAGTTGTCCACAAAAATTCCATTCAACAAGTAGTTTCCCTGAAGAGTAGCTTCCCTGGTAACAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418370.6
ENST00000515434.1
CDS CAA 72 bp TGGGTTATTTTACTCAAAAGGCATTGTCTAGTCACATaGCTGGAGAATCAAAGAAAGTGGGAGGCACAGTTT +
Preference number: 6 (lower is better)
Translates to: WVILLKRHCLVT*LENQRKWEAQF
Trigger: AAACTGTGCCTCCCACTTTCTTTGATTCTCCAGCAATGTGACTAGACAATGCCTTTTGAGTAAAATAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515434.1
CDS CAA 72 bp CTAGACGGTTGCAATCTATATGAAAATGGAAACGCTTaGTGTCATCAACTTTGCTCATTTCTCAGGTGCTAT +
Preference number: 6 (lower is better)
Translates to: LDGCNLYENGNA*CHQLCSFLRCY
Trigger: ATAGCACCTGAGAAATGAGCAAAGTTGATGACACAAAGCGTTTCCATTTTCATATAGATTGCAACCGTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515434.1