RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYLIP (Homo sapiens)

Ensembl gene IDs: ENSG00000007944

Ensembl transcript IDs: ENST00000349606.4, ENST00000356840.8

Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGCTTGGGAGAAGTGATGAGTTAACTACCCTCAGTTGTACACCATaGGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAA +
Preference number: 1 (lower is better)
Translates to: VLGRSDELTTLSCTP*GSISHSASSAFPSQ
Trigger: TTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAACTGAGGGTAGTTAACTCATCACTTCTCCCAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR GCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTTCCAAGGAATGTGTCTaGGTCCCAGAGCTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: GSISHSASSAFPSQGECSSKECV*VPELLL
Trigger: CAGGAGGAGCTCTGGGACGCAGACACATTCCTTGGA...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGGCCCGGGGAGTACTTaGCTACTCCACAGTAATCTT +
Preference number: 2 (lower is better)
Translates to: GSISHSASSAFPSQGECSGPGST*LLHSNL
Trigger: AAGATTACTGTGGAGTAGTCAAGTACTCCCCGGGCC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCTCCTCCTGGTCCCATaGCTGGAGTTGTTGATTCTA +
Preference number: 2 (lower is better)
Translates to: GSISHSASSAFPSQGECSLLLVP*LELLIL
Trigger: TAGAATCAACAACTCCAGTCATGGGACCAGGAGGAG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGGGAGCCACCCACATTaGGTGAGCTGCTTTTTACTA +
Preference number: 2 (lower is better)
Translates to: GSISHSASSAFPSQGECSGSHPH*VSCFLL
Trigger: TAGTAAAAAGCAGCTCACTCAATGTGGGTGGCTCCC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGGGAGCCACCCACATTaGGTGAGCTGCTTTTTACTA +
Preference number: 2 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPGSHPH*VSCFLL
Trigger: TAGTAAAAAGCAGCTCACTCAATGTGGGTGGCTCCC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGATATGTTTTTGCAGTaGGGAGTAGCTGTGTTATTT +
Preference number: 2 (lower is better)
Translates to: GSISHSASSAFPSQGECSDMFLQ*GVAVLF
Trigger: AAATAACACAGCTACTCCTCACTGCAAAAACATATC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR CCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCATGGCAGATGGGTGTTaGAATAATTACTTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPMADGC*NNYFLH
Trigger: GTGGAGAAAGTAATTATTCCAACACCCATCTGCCAT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR GCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCACTTTTTGGCTATGTTaGCACTTCACTGACATCAAA +
Preference number: 2 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPTFWLC*HFTDIK
Trigger: TTTGATGTCAGTGAAGTGGCAACATAGCCAAAAAGT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR CCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCCCTATTAAAAATGGTTaGAGCTCCATGACCATACAA +
Preference number: 2 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPPIKNG*SSMTIQ
Trigger: TTGTATGGTCATGGAGCTCCAACCATTTTTAATAGG...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTTCCCAGAGCTCCTCCTaGTCCCATGACTGGAGTTGT +
Preference number: 2 (lower is better)
Translates to: PFETYRGDNPKLILKHLLSQSSS*SHDWSC
Trigger: ACAACTCCAGTCATGGGACCAGGAGGAGCTCTGGGA...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTGGCCCGGGGAGTACTTaGCTACTCCACAGTAATCTT +
Preference number: 2 (lower is better)
Translates to: PFETYRGDNPKLILKHLLGPGST*LLHSNL
Trigger: AAGATTACTGTGGAGTAGTCAAGTACTCCCCGGGCC...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTGCAAAGCAACACCAGTaGGTGAAGCTGGGATCGAGT +
Preference number: 2 (lower is better)
Translates to: PFETYRGDNPKLILKHLLAKQHQ*VKLGSS
Trigger: ACTCGATCCCAGCTTCACCCACTGGTGTTGCTTTGC...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCTCAGTTGTACACCATaGGGCTCCATCTCTCACTCA +
Preference number: 2 (lower is better)
Translates to: PFETYRGDNPKLILKHLLLSCTP*GSISHS
Trigger: TGAGTGAGAGATGGAGCCTCATGGTGTACAACTGAG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCATCCAAGGAATGTGTCTaGGTCCCAGAGCTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSSKECV*VPELLL
Trigger: CAGGAGGAGCTCTGGGACGCAGACACATTCCTTGGA...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCATCCCAGAGCTCCTCCTaGTCCCATGACTGGAGTTGT +
Preference number: 2 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSSQSSS*SHDWSC
Trigger: ACAACTCCAGTCATGGGACCAGGAGGAGCTCTGGGA...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACTCCTCCTGGTCCCATaGCTGGAGTTGTTGATTCTA +
Preference number: 2 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSLLLVP*LELLIL
Trigger: TAGAATCAACAACTCCAGTCATGGGACCAGGAGGAG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCATGACTGGAGTTGTTaGTTCTACGCATGGATATGT +
Preference number: 2 (lower is better)
Translates to: PFETYRGDNPKLILKHLLHDWSC*FYAWIC
Trigger: ACATATCCATGCGTAGAATCAACAACTCCAGTCATG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCAGTTCATGGAAACATaGCAAGTCCAACAAAAGCAC +
Preference number: 2 (lower is better)
Translates to: PFETYRGDNPKLILKHLLQFMET*QVQQKH
Trigger: GTGCTTTTGTTGGACTTGGCATGTTTCCATGAACTG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTAGGTACCCAACTTTTTaGCTATGTTGCCACTTCACT +
Preference number: 2 (lower is better)
Translates to: PFETYRGDNPKLILKHLLRYPTF*LCCHFT
Trigger: AGTGAAGTGGCAACATAGCCAAAAAGTTGGGTACCT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTATGTTGCCACTTCACTaGCATCAAAGACTTTACCTA +
Preference number: 2 (lower is better)
Translates to: PFETYRGDNPKLILKHLLMLPLH*HQRLYL
Trigger: TAGGTAAAGTCTTTGATGTCAGTGAAGTGGCAACAT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTATGGTTGGAGCTCCATaGCCATACAAAAAGAATGAA +
Preference number: 2 (lower is better)
Translates to: PFETYRGDNPKLILKHLLMVGAP*PYKKNE
Trigger: TTCATTCTTTTTGTATGGTCATGGAGCTCCAACCAT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTATGGCAGATGGGTGTTaGAATAATTACTTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: PFETYRGDNPKLILKHLLMADGC*NNYFLH
Trigger: GTGGAGAAAGTAATTATTCCAACACCCATCTGCCAT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR TCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTGATATGTTTTTGCAGTaGGGAGTAGCTGTGTTATTT +
Preference number: 2 (lower is better)
Translates to: PFETYRGDNPKLILKHLLDMFLQ*GVAVLF
Trigger: AAATAACACAGCTACTCCTCACTGCAAAAACATATC...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACAGTTCATGGAAACATaGCAAGTCCAACAAAAGCAC +
Preference number: 2 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSQFMET*QVQQKH
Trigger: GTGCTTTTGTTGGACTTGGCATGTTTCCATGAACTG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR TCA 72 bp AGAAGTGATGAGTTAACTACCCTCAGTTGTACACCATaGGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTC +
Preference number: 3 (lower is better)
Translates to: RSDELTTLSCTP*GSISHSASSAF
Trigger: GAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAACTGAGGGTAGTTAACTCATCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
3UTR CCA 72 bp CTTACAACATCATTTCCTAAAAGGTACCCAACTTTTTaGCTATGTTGCCACTTCACTGACATCAAAGACTTT +
Preference number: 3 (lower is better)
Translates to: LTTSFPKRYPTF*LCCHFTDIKDF
Trigger: AAAGTCTTTGATGTCAGTGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGGCTGGGGCTGCCGCTaGCGCCACAGCCGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPGWGCR*RHSRLL
Trigger: GAGAAGGCGGCTGTGGCGGCAGCGGCAGCCCCAGCC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCCAGCATGGCTGGGGCTaGCGCTGCCGCCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPQHGWG*RCRHSR
Trigger: GCGGCTGTGGCGGCAGCGGCAGCCCCAGCCATGCTG...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCCCCTGTCCTCCGCGGTaGCGCCGCACTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPPCPPR*RRTPAA
Trigger: GGCTGCTGGAGTGCGGCGCCACCGCGGAGGACAGGG...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR GCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCGAAGGCTGCAGCTCTaGGGACCCTTGTCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSRRLQL*GPLSGA
Trigger: GGCCCCGGACAAGGGTCCGCAGAGCTGCAGCCTTCG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTTGGTGTGCGCGGGGCTaGCGCCTTGTCACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSWCARG*RLVTGG
Trigger: CCCACCAGTGACAAGGCGGCAGCCCCGCGCACACCA...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCCGCCTTGTCACTGGTaGGACCCAGCCCCGGACTCG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSPPCHW*DPAPDS
Trigger: CGAGTCCGGGGCTGGGTCCCACCAGTGACAAGGCGG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCTGCCGCCTTGTCACTaGTGGGACCCAGCCCCGGAC +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSLPPCH*WDPAPD
Trigger: GTCCGGGGCTGGGTCCCACCAGTGACAAGGCGGCAG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTAGCACCCGGGTCTGCTaGCAGCTGAGGCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSSTRVC*QLRPSQ
Trigger: CTGCGAGGGCCTCAGCTGCCAGCAGACCCGGGTGCT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCTGCAGCACCCGGGTCTaGTGGCAGCTGAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPCSTRV*WQLRPS
Trigger: CGAGGGCCTCAGCTGCCAGCAGACCCGGGTGCTGCA...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGGGCCAGGAGGGCACTaGGTTCCACTGCCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPGPGGH*VPLPAL
Trigger: CAGAGCAGGCAGTGGAACTCAGTGCCCTCCTGGCCC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTATAACACAGCATGGCTaGGGCTGCCGCTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSITQHG*GCRCRH
Trigger: GTGGCGGCAGCGGCAGCCCCAGCCATGCTGTGTTAT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGGCAGTCCTCGCCGTTaGCTTTCGCCTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSGSPRR*LSPPPP
Trigger: TGGAGGTGGAGGCGAAAGCCAACGGCGAGGACTGCC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTTTGCGTAGCTTCTCCTaGAGCACCCGGGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSLRSFS*STRVCW
Trigger: CCAGCAGACCCGGGTGCTGCAGGAGAAGCTACGCAA...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTTCACATAACACAGCATaGCTGGGGCTGCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSSHNTA*LGLPLP
Trigger: CGGCAGCGGCAGCCCCAGCCATGCTGTGTTATGTGA...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGGGGAACACAAGAGGTaGCCTGCCAAGAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPGEHKR*PAKRAS
Trigger: GGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCCC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGGACATGACTGTAGCTaGGCGGCGCAGCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSGHDCS*AAQLSQ
Trigger: CTGTGAGAGCTGCGCCGCCCAGCTACAGTCATGTCC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAGTCGCCTGCACACCTaGTTGAGGCAGTCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPSRLHT*LRQSSP
Trigger: CGGCGAGGACTGCCTCAACCAGGTGTGCAGGCGACT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTAGCAACACCAGTGGGTaGAGCTGGGATCGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSSNTSG*SWDRVL
Trigger: AAGCACTCGATCCCAGCTTCACCCACTGGTGTTGCT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGGCCCTCGCAGCTGCTaGAGTTCATGCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPGPRSC*SSCCFL
Trigger: CAGAAAGCAGCATGAACTGCAGCAGCTGCGAGGGCC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGCTCCACACGCGACCTaGAGACGGGACATGACTGTA +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPAPHAT*RRDMTV
Trigger: TACAGTCATGTCCCGTCTGCAGGTCGCGTGTGGAGC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCTTCCACTGCCTGCTCTaGGGAACACAAGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPFHCLL*GTQEVA
Trigger: GGCCACCTCTTGTGTTCCCCAGAGCAGGCAGTGGAA...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCAGCTGAAGCCTGGCTaGTCCCCTCCAACTCCTTAT +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSQLKPG*SPPTPY
Trigger: ATAAGGAGTTGGAGGGGACCAGCCAGGCTTCAGCTG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTTCACAGCACACAGTGTaGCCACAGGGACAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSSQHTV*PQGQKV
Trigger: CACCTTCTGTCCCTGTGGCCACACTGTGTGCTGTGA...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTTCCCAGAGCTCCTCCTaGTCCCATGACTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSSQSSS*SHDWSC
Trigger: ACAACTCCAGTCATGGGACCAGGAGGAGCTCTGGGA...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTAGCCCATCCATCTGCTaGGAGATCCGGTTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSSPSIC*EIRFLR
Trigger: CCTGAGAAACCGGATCTCCCAGCAGATGGATGGGCT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAACTTGGTATTCAGCTaGAGCCTGGCTGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPNLVFS*SLAGPL
Trigger: GAGGGGACCAGCCAGGCTTCAGCTGAATACCAAGTT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGTTCATGCTGCTTTCTaGGGACTTCAGAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSVHAAF*GLQRRV
Trigger: CACTCGCCTCTGAAGTCCTCAGAAAGCAGCATGAAC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCACACAAGAGGTGGCCTaGCAAGAGGGCCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPTQEVA*QEGLLD
Trigger: ATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTAAGTCACGGCTATACTaGATCATCACGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSKSRLY*IITALV
Trigger: GACCAGCGCCGTGATGATGCAGTATAGCCGTGACTT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCTCTCCAAACTTGGTCTaGGCCAGGAGGGCACTGAGT +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPSPNLV*ARRALS
Trigger: ACTCAGTGCCCTCCTGGCCCAGACCAAGTTTGGAGA...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCTGTAGTCTCCAAACTTaGTCTGGGCCAGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPCSLQT*SGPGGH
Trigger: GTGCCCTCCTGGCCCAGACCAAGTTTGGAGACTACA...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCAATGCTGTTCAAGGTaGCAGAGGAGAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSQCCSR*QRRAPW
Trigger: CCAAGGAGCTCTCCTCTGCCACCTTGAACAGCATTG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGCTCTGGTTGTTTCTTaGAACGAGGTCCACAACGCC +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPALVVS*NEVHNA
Trigger: GGCGTTGTGGACCTCGTTTCAAGAAACAACCAGAGC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCCTTCAGAGGCGAGTGTaGAGGGCTCTGGTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPLQRRV*RALVVS
Trigger: AGAAACAACCAGAGCCCTTCACACTCGCCTCTGAAG...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGTTCATGCTGCTTTCTaGGGACTTCAGAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPVHAAF*GLQRRV
Trigger: CACTCGCCTCTGAAGTCCTCAGAAAGCAGCATGAAC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGGCCCGGGGAGTACTTaGCTACTCCACAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPGPGST*LLHSNL
Trigger: AAGATTACTGTGGAGTAGTCAAGTACTCCCCGGGCC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCTCAGTTGTACACCATaGGGCTCCATCTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSLSCTP*GSISHS
Trigger: TGAGTGAGAGATGGAGCCTCATGGTGTACAACTGAG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTAGAAAACCTGCTAGCTaGCCAGCTTCCAAAATGCCC +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSRKPAS*PASKMP
Trigger: GGGCATTTTGGAAGCTGGTCAGCTAGCAGGTTTTCT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTTCTGCTCCTGTAAGATaGGATGAGGCTCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSSAPVR*DEAPRR
Trigger: TCTTCGTGGAGCCTCATCTCATCTTACAGGAGCAGA...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR GCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGTCACACCTGTAGAATaGGTGCGTCTCTGTTATCGC +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSVTPVE*VRLCYR
Trigger: GCGATAACAGAGACGCACGCATTCTACAGGTGTGAC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCACCCCCTCACCCGCTaGCCGCCAGCTGCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLHPLTR*PPAAPV
Trigger: GACAGGGGCAGCTGGCGGGCAGCGGGTGAGGGGGTG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTACATTCTTTCCTGACTaGGTGGCCATCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSTFFPD*VAICTT
Trigger: TGTGGTGCAGATGGCCACCCAGTCAGGAAAGAATGT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTAGAGCCCTCCTGGCATaGTCATACACCTCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSRALLA*SYTSFD
Trigger: ATCAAAGGAGGTGTATGACCATGCCAGGAGGGCTCT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCTGTACAGAGCCCTCCTaGCATGGTCATACACCTCCT +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPCTEPS*HGHTPP
Trigger: AGGAGGTGTATGACCATGCCAGGAGGGCTCTGTACA...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTATATACATTCTTTCCTaGCTGGGTGGCCATCTGCAC +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSIYILS*LGGHLH
Trigger: GTGCAGATGGCCACCCAGTCAGGAAAGAATGTATAT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTGGGTCTGCTGGCAGCTaGGGCCCTCGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLGSAGS*GPRSCC
Trigger: GCAGCAGCTGCGAGGGCCTCAGCTGCCAGCAGACCC...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAACAGAGATGCCAAGTaGCCCTTCAAGTCACGGCTA +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPNRDAK*PFKSRL
Trigger: TAGCCGTGACTTGAAGGGCCACTTGGCATCTCTGTT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGAGTGTGAAGGGCTCTaGTTGTTTCTTGAAACGAGG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSECEGL*LFLETR
Trigger: CCTCGTTTCAAGAAACAACCAGAGCCCTTCACACTC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCCAAGAGGGCCTCCTTaGTGTGCAAGAAAAAGATAT +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSPRGPP*CARKRY
Trigger: ATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCATATACATTCTTTCCTaGCTGGGTGGCCATCTGCAC +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPIYILS*LGGHLH
Trigger: GTGCAGATGGCCACCCAGTCAGGAAAGAATGTATAT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTAGATTACAGTCAGATTaGGAAGACTGGTGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSRLQSD*EDWCAL
Trigger: CAACGCACACCAGTCTTCTCAATCTGACTGTAATCT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTAATAGTCAACTTCTATaGTTCCCAGTCGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSNSQLL*FPVACT
Trigger: TGTGCAGGCGACTGGGAATCATAGAAGTTGACTATT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCGAAGGCTGCAGCTCTaGGGACCCTTGTCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLRRLQL*GPLSGA
Trigger: GGCCCCGGACAAGGGTCCGCAGAGCTGCAGCCTTCG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTTGGTGTGCGCGGGGCTaGCGCCTTGTCACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLWCARG*RLVTGG
Trigger: CCCACCAGTGACAAGGCGGCAGCCCCGCGCACACCA...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGGCTGGGGCTGCCGCTaGCGCCACAGCCGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSGWGCR*RHSRLL
Trigger: GAGAAGGCGGCTGTGGCGGCAGCGGCAGCCCCAGCC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAGCTGCTGCAGTTCATaGTGCTTTCTGAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPSCCSS*CFLRTS
Trigger: TGAAGTCCTCAGAAAGCAGCATGAACTGCAGCAGCT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTTGCAGCACCCGGGTCTaGTGGCAGCTGAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLCSTRV*WQLRPS
Trigger: CGAGGGCCTCAGCTGCCAGCAGACCCGGGTGCTGCA...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCAGCCGCCTTCTCTTTaGTGTGCGCGGGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLQPPSL*CARGCR
Trigger: GCGGCAGCCCCGCGCACACCAAAGAGAAGGCGGCTG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCCCAAGAGGGCCTCCTTaGTGTGCAAGAAAAAGATAT +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPPRGPP*CARKRY
Trigger: ATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGG...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGGGTCTGCTGGCAGCTaGGGCCCTCGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSGSAGS*GPRSCC
Trigger: GCAGCAGCTGCGAGGGCCTCAGCTGCCAGCAGACCC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTGCCTGCACACCTGGTTaGGGCAGTCCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLACTPG*GSPRRW
Trigger: CCAACGGCGAGGACTGCCTCAACCAGGTGTGCAGGC...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR GCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTTATGTTTTGCAACAATaGTGTTCAAGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSYVLQQ*CSRWQR
Trigger: CCTCTGCCACCTTGAACAGCATTGTTGCAAAACATA...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCAGTTCATGGAAACATaGCAAGTCCAACAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSQFMET*QVQQKH
Trigger: GTGCTTTTGTTGGACTTGGCATGTTTCCATGAACTG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTGGACTCGGAGAGGGCTaGCCCTCGAAGGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLGLGEG*PSKAAA
Trigger: AGCTGCAGCCTTCGAGGGCCAGCCCTCTCCGAGTCC...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTACAATCTGCAAAACTTaGTATTCAGCTGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSTICKT*YSAEAW
Trigger: CCAGGCTTCAGCTGAATACCAAGTTTTGCAGATTGT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGTCATCTTTACAAATTaGGATTCCTTCAGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSVIFTN*DSFRSN
Trigger: GTTGGACCTGAAGGAATCTCAATTTGTAAAGATGAC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCTCCCAGATTCCTTGGTaGCCGTCAAATATACATTCT +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPSQIPW*PSNIHS
Trigger: AGAATGTATATTTGACGGTCACCAAGGAATCTGGGA...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCCATGACTGGAGTTGTTaGTTCTACGCATGGATATGT +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPHDWSC*FYAWIC
Trigger: ACATATCCATGCGTAGAATCAACAACTCCAGTCATG...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTATGTTGCCACTTCACTaGCATCAAAGACTTTACCTA +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSMLPLH*HQRLYL
Trigger: TAGGTAAAGTCTTTGATGTCAGTGAAGTGGCAACAT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTATGGTTGGAGCTCCATaGCCATACAAAAAGAATGAA +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSMVGAP*PYKKNE
Trigger: TTCATTCTTTTTGTATGGTCATGGAGCTCCAACCAT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCTGGCCCTCGAAGGCTaGAGCTCTGCGGACCCTTGT +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLLALEG*SSADPC
Trigger: ACAAGGGTCCGCAGAGCTGCAGCCTTCGAGGGCCAG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTGCCTTCTCTTTGGTGTaGGCGGGGCTGCCGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLAFSLV*AGLPPC
Trigger: ACAAGGCGGCAGCCCCGCGCACACCAAAGAGAAGGC...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCCAGAATGCCATTCTATaGCATAGTTTTCCATTGCCG +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPQNAIL*HSFPLP
Trigger: CGGCAATGGAAAACTATGGCATAGAATGGCATTCTG...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACCGCCTTGTCACTGGTaGGACCCAGCCCCGGACTCG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSPPCHW*DPAPDS
Trigger: CGAGTCCGGGGCTGGGTCCCACCAGTGACAAGGCGG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACAGCCGCCTTCTCTTTaGTGTGCGCGGGGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSQPPSL*CARGCR
Trigger: GCGGCAGCCCCGCGCACACCAAAGAGAAGGCGGCTG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAAGCACCCGGGTCTGCTaGCAGCTGAGGCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSSTRVC*QLRPSQ
Trigger: CTGCGAGGGCCTCAGCTGCCAGCAGACCCGGGTGCT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCATGTTGCCACTTCACTaGCATCAAAGACTTTACCTA +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPMLPLH*HQRLYL
Trigger: TAGGTAAAGTCTTTGATGTCAGTGAAGTGGCAACAT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCAACTCCTTATGTTTTaGAACAATGCTGTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: GSISHSASSAFPSQGECSQLLMF*NNAVQG
Trigger: ACCTTGAACAGCATTGTTGCAAAACATAAGGAGTTG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCATTGCCGACACAATCTaGAAAACTTGGTATTCAGCT +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPIADTI*KTWYSA
Trigger: AGCTGAATACCAAGTTTTGCAGATTGTGTCGGCAAT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTTTGCGTAGCTTCTCCTaGAGCACCCGGGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLLRSFS*STRVCW
Trigger: CCAGCAGACCCGGGTGCTGCAGGAGAAGCTACGCAA...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGGACTCGGAGAGGGCTaGCCCTCGAAGGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSGLGEG*PSKAAA
Trigger: AGCTGCAGCCTTCGAGGGCCAGCCCTCTCCGAGTCC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCCCTCATAGTTATACTTaGCAGTGTTCTGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPPHSYT*QCSGCS
Trigger: ACTACAACCAGAACACTGCCAAGTATAACTATGAGG...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGATATGTTTTTGCAGTaGGGAGTAGCTGTGTTATTT +
Preference number: 4 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPDMFLQ*GVAVLF
Trigger: AAATAACACAGCTACTCCTCACTGCAAAAACATATC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTGCTCCACACGCGACCTaGAGACGGGACATGACTGTA +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLAPHAT*RRDMTV
Trigger: TACAGTCATGTCCCGTCTGCAGGTCGCGTGTGGAGC...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAATAACACAGCATGGCTaGGGCTGCCGCTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSITQHG*GCRCRH
Trigger: GTGGCGGCAGCGGCAGCCCCAGCCATGCTGTGTTAT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGGCAGTCCTCGCCGTTaGCTTTCGCCTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSGSPRR*LSPPPP
Trigger: TGGAGGTGGAGGCGAAAGCCAACGGCGAGGACTGCC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCTGAGTTCCACTGCCTaGTCTGGGGAACACAAGAGG +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLLSSTA*SGEHKR
Trigger: CCTCTTGTGTTCCCCAGAGCAGGCAGTGGAACTCAG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCCTCGCAGCACACCATaGACAGCATGGCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLPRSTP*TAWLPS
Trigger: TGAAGGAAGCCATGCTGTGCATGGTGTGCTGCGAGG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCATCACATAACACAGCATaGCTGGGGCTGCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSSHNTA*LGLPLP
Trigger: CGGCAGCGGCAGCCCCAGCCATGCTGTGTTATGTGA...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTTCTCCAAACTTGGTCTaGGCCAGGAGGGCACTGAGT +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLSPNLV*ARRALS
Trigger: ACTCAGTGCCCTCCTGGCCCAGACCAAGTTTGGAGA...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTTGTAGTCTCCAAACTTaGTCTGGGCCAGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLCSLQT*SGPGGH
Trigger: GTGCCCTCCTGGCCCAGACCAAGTTTGGAGACTACA...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCAGCTGAAGCCTGGCTaGTCCCCTCCAACTCCTTAT +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLQLKPG*SPPTPY
Trigger: ATAAGGAGTTGGAGGGGACCAGCCAGGCTTCAGCTG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTTATTCAGCTGAAGCCTaGCTGGTCCCCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLYSAEA*LVPSNS
Trigger: GGAGTTGGAGGGGACCAGCCAGGCTTCAGCTGAATA...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGGACATGACTGTAGCTaGGCGGCGCAGCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSGHDCS*AAQLSQ
Trigger: CTGTGAGAGCTGCGCCGCCCAGCTACAGTCATGTCC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGGCCCTCGCAGCTGCTaGAGTTCATGCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSGPRSC*SSCCFL
Trigger: CAGAAAGCAGCATGAACTGCAGCAGCTGCGAGGGCC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCAATGCTGTTCAAGGTaGCAGAGGAGAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLQCCSR*QRRAPW
Trigger: CCAAGGAGCTCTCCTCTGCCACCTTGAACAGCATTG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTAAGACTGGTGTGCGTTaGCAGATAGACGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLKTGVR*QIDVLD
Trigger: GTCCAGCACGTCTATCTGCCAACGCACACCAGTCTT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAAAAGATATGCCTGGTTaGGGCAGTCCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSKDMPG*GSPRRW
Trigger: CCAACGGCGAGGACTGCCTCAACCAGGCATATCTTT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349606.4
CDS-3UTR TCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTGGGAGCCACCCACATTaGGTGAGCTGCTTTTTACTA +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLGSHPH*VSCFLL
Trigger: TAGTAAAAAGCAGCTCACTCAATGTGGGTGGCTCCC...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAAGCAACACCAGTGGGTaGAGCTGGGATCGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSSNTSG*SWDRVL
Trigger: AAGCACTCGATCCCAGCTTCACCCACTGGTGTTGCT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAACACAAGAGGTGGCCTaGCAAGAGGGCCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSTQEVA*QEGLLD
Trigger: ATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACTGAGTTCCACTGCCTaGTCTGGGGAACACAAGAGG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSLSSTA*SGEHKR
Trigger: CCTCTTGTGTTCCCCAGAGCAGGCAGTGGAACTCAG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACCTCGCAGCACACCATaGACAGCATGGCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSPRSTP*TAWLPS
Trigger: TGAAGGAAGCCATGCTGTGCATGGTGTGCTGCGAGG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGCTAGCCCATCCATCTaGTGGGAGATCCGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSASPSI*WEIRFL
Trigger: GAGAAACCGGATCTCCCAGCAGATGGATGGGCTAGC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTAGAAAAAGATATGCCTaGTTGAGGCAGTCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLRKRYA*LRQSSP
Trigger: CGGCGAGGACTGCCTCAACCAGGCATATCTTTTTCT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349606.4
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTACATTCTTTCCTGACTaGGTGGCCATCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLTFFPD*VAICTT
Trigger: TGTGGTGCAGATGGCCACCCAGTCAGGAAAGAATGT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGCATCATCACGGCGCTaGTCACTGTGTCACACCTGT +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSASSRR*SLCHTC
Trigger: ACAGGTGTGACACAGTGACCAGCGCCGTGATGATGC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTAACAGAGATGCCAAGTaGCCCTTCAAGTCACGGCTA +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLNRDAK*PFKSRL
Trigger: TAGCCGTGACTTGAAGGGCCACTTGGCATCTCTGTT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTAGAGCCCTCCTGGCATaGTCATACACCTCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLRALLA*SYTSFD
Trigger: ATCAAAGGAGGTGTATGACCATGCCAGGAGGGCTCT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCATCACAGCACACAGTGTaGCCACAGGGACAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSSQHTV*PQGQKV
Trigger: CACCTTCTGTCCCTGTGGCCACACTGTGTGCTGTGA...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGCTCTGGTTGTTTCTTaGAACGAGGTCCACAACGCC +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSALVVS*NEVHNA
Trigger: GGCGTTGTGGACCTCGTTTCAAGAAACAACCAGAGC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACTTCAGAGGCGAGTGTaGAGGGCTCTGGTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSLQRRV*RALVVS
Trigger: AGAAACAACCAGAGCCCTTCACACTCGCCTCTGAAG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGGCCCGGGGAGTACTTaGCTACTCCACAGTAATCTT +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSGPGST*LLHSNL
Trigger: AAGATTACTGTGGAGTAGTCAAGTACTCCCCGGGCC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACCAATGAGCAGTTTCTaGCCTTCGCTATCCCGCACA +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSPMSSF*PSLSRT
Trigger: TGTGCGGGATAGCGAAGGGCAGAAACTGCTCATTGG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAAAGTCACGGCTATACTaGATCATCACGGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSKSRLY*IITALV
Trigger: GACCAGCGCCGTGATGATGCAGTATAGCCGTGACTT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCATGTACAGAGCCCTCCTaGCATGGTCATACACCTCCT +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSCTEPS*HGHTPP
Trigger: AGGAGGTGTATGACCATGCCAGGAGGGCTCTGTACA...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAAAGACTGGTGTGCGTTaGCAGATAGACGTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSKTGVR*QIDVLD
Trigger: GTCCAGCACGTCTATCTGCCAACGCACACCAGTCTT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGCAAAGCAACACCAGTaGGTGAAGCTGGGATCGAGT +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSAKQHQ*VKLGSS
Trigger: ACTCGATCCCAGCTTCACCCACTGGTGTTGCTTTGC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGGGAGCCACCCACATTaGGTGAGCTGCTTTTTACTA +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSGSHPH*VSCFLL
Trigger: TAGTAAAAAGCAGCTCACTCAATGTGGGTGGCTCCC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTAGGGCCTCCTTGATGTaGAAGAAAAAGATATGCCTG +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLRASLM*KKKICL
Trigger: CAGGCATATCTTTTTCTTGCACATCAAGGAGGCCCT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349606.4
CDS-3UTR TCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTTCCCAGATTCCTTGGTaGCCGTCAAATATACATTCT +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLSQIPW*PSNIHS
Trigger: AGAATGTATATTTGACGGTCACCAAGGAATCTGGGA...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCATCCTGTAAGATGAGATaGGGCTCCACGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSSCKMR*GSTKNL
Trigger: CAAGTTCTTCGTGGAGCCTCATCTCATCTTACAGGA...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCATGCTGCAGTTCATGCTaGTTTCTGAGGACTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSCCSSC*FLRTSE
Trigger: CTCTGAAGTCCTCAGAAAGCAGCATGAACTGCAGCA...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTAGGGCCTCCTTGATGTaGAAGAAAAAGATATGCCTA +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLRASLM*KKKICL
Trigger: TAGGCATATCTTTTTCTTGCACATCAAGGAGGCCCT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTACAATCTGCAAAACTTaGTATTCAGCTGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLTICKT*YSAEAW
Trigger: CCAGGCTTCAGCTGAATACCAAGTTTTGCAGATTGT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGAGTGTGAAGGGCTCTaGTTGTTTCTTGAAACGAGG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSECEGL*LFLETR
Trigger: CCTCGTTTCAAGAAACAACCAGAGCCCTTCACACTC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTGTCATCTTTACAAATTaGGATTCCTTCAGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLVIFTN*DSFRSN
Trigger: GTTGGACCTGAAGGAATCTCAATTTGTAAAGATGAC...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCATGCAAGAAAAAGATATaGCTGGTTGAGGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSCKKKI*LVEAVL
Trigger: GAGGACTGCCTCAACCAGGCATATCTTTTTCTTGCA...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000349606.4
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAATTCAGAAACAGAGATaGCAAGTGGCCCTTCAAGTC +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSIQKQR*QVALQV
Trigger: GACTTGAAGGGCCACTTGGCATCTCTGTTTCTGAAT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCCTCATAGTTATACTTaGCAGTGTTCTGGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PFETYRGDNPKLILKHLLPHSYT*QCSGCS
Trigger: ACTACAACCAGAACACTGCCAAGTATAACTATGAGG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCATATGTTTTGCAACAATaGTGTTCAAGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSYVLQQ*CSRWQR
Trigger: CCTCTGCCACCTTGAACAGCATTGTTGCAAAACATA...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACAGAATGCCATTCTATaGCATAGTTTTCCATTGCCG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSQNAIL*HSFPLP
Trigger: CGGCAATGGAAAACTATGGCATAGAATGGCATTCTG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAAGGTACCCAACTTTTTaGCTATGTTGCCACTTCACT +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSRYPTF*LCCHFT
Trigger: AGTGAAGTGGCAACATAGCCAAAAAGTTGGGTACCT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR TCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAATGGTTGGAGCTCCATaGCCATACAAAAAGAATGAA +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSMVGAP*PYKKNE
Trigger: TTCATTCTTTTTGTATGGTCATGGAGCTCCAACCAT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAATTGCCGACACAATCTaGAAAACTTGGTATTCAGCT +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSIADTI*KTWYSA
Trigger: AGCTGAATACCAAGTTTTGCAGATTGTGTCGGCAAT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCATGCAAGAAAAAGATATaGCTAGTCTGCTCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSCKKKI*LVCSCK
Trigger: CTTACAGGAGCAGACTAGGCATATCTTTTTCTTGCA...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAATGGCAGATGGGTGTTaGAATAATTACTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSMADGC*NNYFLH
Trigger: GTGGAGAAAGTAATTATTCCAACACCCATCTGCCAT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACAACTCCTTATGTTTTaGAACAATGCTGTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSQLLMF*NNAVQG
Trigger: ACCTTGAACAGCATTGTTGCAAAACATAAGGAGTTG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR GCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAACTTTTTGGCTATGTTaGCACTTCACTGACATCAAA +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSTFWLC*HFTDIK
Trigger: TTTGATGTCAGTGAAGTGGCAACATAGCCAAAAAGT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CCA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACCTATTAAAAATGGTTaGAGCTCCATGACCATACAA +
Preference number: 4 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSPIKNG*SSMTIQ
Trigger: TTGTATGGTCATGGAGCTCCAACCATTTTTAATAGG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 90 bp GCCGCCTTGTCACTGGTGGGACCCAGCCCCGGACTCGGAGAGGGCTaGCCCTCGAAGGCTGCAGCTCTGCGGACCCTTGTCCGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: AALSLVGPSPGLGEG*PSKAAALRTLVRGP
Trigger: GGGGCCCCGGACAAGGGTCCGCAGAGCTGCAGCCTTCGAGGGCCAGCCCTCTCCGAGTCCGGGGCTGGGTCCCACCAGTGACAAGGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 90 bp CTGCCGCTGCCGCCACAGCCGCCTTCTCTTTGGTGTGCGCGGGGCTaGCGCCTTGTCACTGGTGGGACCCAGCCCCGGACTCGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: LPLPPQPPSLWCARG*RLVTGGTQPRTRRG
Trigger: CCCTCTCCGAGTCCGGGGCTGGGTCCCACCAGTGACAAGGCGGCAGCCCCGCGCACACCAAAGAGAAGGCGGCTGTGGCGGCAGCGGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 90 bp CGCGTCCGGCCTCGTCACATAACACAGCATGGCTGGGGCTGCCGCTaGCGCCACAGCCGCCTTCTCTTTGGTGTGCGCGGGGCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: RVRPRHITQHGWGCR*RHSRLLFGVRGAAA
Trigger: GGCGGCAGCCCCGCGCACACCAAAGAGAAGGCGGCTGTGGCGGCAGCGGCAGCCCCAGCCATGCTGTGTTATGTGACGAGGCCGGACGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 90 bp GCCGCCTTCTCTTTGGTGTGCGCGGGGCTGCCGCCTTGTCACTGGTaGGACCCAGCCCCGGACTCGGAGAGGGCTGGCCCTCGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: AAFSLVCAGLPPCHW*DPAPDSERAGPRRL
Trigger: CAGCCTTCGAGGGCCAGCCCTCTCCGAGTCCGGGGCTGGGTCCCACCAGTGACAAGGCGGCAGCCCCGCGCACACCAAAGAGAAGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 90 bp CAGCACCGCGTCCGGCCTCGTCACATAACACAGCATGGCTGGGGCTaGCGCTGCCGCCACAGCCGCCTTCTCTTTGGTGTGCGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: QHRVRPRHITQHGWG*RCRHSRLLFGVRGA
Trigger: AGCCCCGCGCACACCAAAGAGAAGGCGGCTGTGGCGGCAGCGGCAGCCCCAGCCATGCTGTGTTATGTGACGAGGCCGGACGCGGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCGCGGGGCTGCCGCCTaGTCACTGGTGGGACCCAGC +
Preference number: 5 (lower is better)
Translates to: GSISHSASSAFPSQGECSRGAAA*SLVGPS
Trigger: GCTGGGTCCCACCAGTGACAAGGCGGCAGCCCCGCG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 90 bp TCTCCAAACTTGGTCTGGGCCAGGAGGGCACTGAGTTCCACTGCCTaGTCTGGGGAACACAAGAGGTGGCCTGCCAAGAGGGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SPNLVWARRALSSTA*SGEHKRWPAKRASL
Trigger: CAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCCCAGAGCAGGCAGTGGAACTCAGTGCCCTCCTGGCCCAGACCAAGTTTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 90 bp GGACATGACTGTAGCTGGGCGGCGCAGCTCTCACAGCACACAGTGTaGCCACAGGGACAGAAGGTGGAGTTGATCTCCTCCTCGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GHDCSWAAQLSQHTV*PQGQKVELISSSQH
Trigger: GTGCTGCGAGGAGGAGATCAACTCCACCTTCTGTCCCTGTGGCCACACTGTGTGCTGTGAGAGCTGCGCCGCCCAGCTACAGTCATGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTAGGCAGTCCTCGCCGTaGGCTTTCGCCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: GSISHSASSAFPSQGECSRQSSP*AFASTS
Trigger: GGAGGTGGAGGCGAAAGCCAACGGCGAGGACTGCCT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS TCA 90 bp CCTGCTCTGGGGAACACAAGAGGTGGCCTGCCAAGAGGGCCTCCTTaGTGTGCAAGAAAAAGATATGCCTGGTTGAGGCAGTCCTCGCCG +
Preference number: 5 (lower is better)
Translates to: PALGNTRGGLPRGPP*CARKRYAWLRQSSP
Trigger: CGGCGAGGACTGCCTCAACCAGGCATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCCCAGAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349606.4
CDS TCA 90 bp TGTTCTGGTTGTAGTCTCCAAACTTGGTCTGGGCCAGGAGGGCACTaGGTTCCACTGCCTGCTCTGGGGAACACAAGAGGTGGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: CSGCSLQTWSGPGGH*VPLPALGNTRGGLP
Trigger: TGGCAGGCCACCTCTTGTGTTCCCCAGAGCAGGCAGTGGAACTCAGTGCCCTCCTGGCCCAGACCAAGTTTGGAGACTACAACCAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGGACAGAAGGTGGAGTaGATCTCCTCCTCGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GSISHSASSAFPSQGECSGQKVE*ISSSQH
Trigger: GTGCTGCGAGGAGGAGATCAACTCCACCTTCTGTCC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS TCA 90 bp AGCTCTCACAGCACACAGTGTGGCCACAGGGACAGAAGGTGGAGTTaGTCTCCTCCTCGCAGCACACCATGCACAGCATGGCTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SSHSTQCGHRDRRWS*SPPRSTPCTAWLPS
Trigger: TGAAGGAAGCCATGCTGTGCATGGTGTGCTGCGAGGAGGAGATCAACTCCACCTTCTGTCCCTGTGGCCACACTGTGTGCTGTGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 90 bp GGCACTGAGTTCCACTGCCTGCTCTGGGGAACACAAGAGGTGGCCTaGCAAGAGGGCCTCCTTGATGTGCAAGAAAAAGATATGCCTGGT +
Preference number: 5 (lower is better)
Translates to: GTEFHCLLWGTQEVA*QEGLLDVQEKDMPG
Trigger: ACCAGGCATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCCCAGAGCAGGCAGTGGAACTCAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349606.4
CDS CCA 90 bp AGGAGGGCACTGAGTTCCACTGCCTGCTCTGGGGAACACAAGAGGTaGCCTGCCAAGAGGGCCTCCTTGATGTGCAAGAAAAAGATATGC +
Preference number: 5 (lower is better)
Translates to: RRALSSTACSGEHKR*PAKRASLMCKKKIC
Trigger: GCATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCCCAGAGCAGGCAGTGGAACTCAGTGCCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTAAAAGATATGCCTGGTaGAGGCAGTCCTCGCCGTTG +
Preference number: 5 (lower is better)
Translates to: GSISHSASSAFPSQGECSKRYAW*RQSSPL
Trigger: CAACGGCGAGGACTGCCTCAACCAGGCATATCTTTT...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349606.4
CDS-3UTR CAA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGGCTCTGGTTGTTTCTaGAAACGAGGTCCACAACGC +
Preference number: 5 (lower is better)
Translates to: GSISHSASSAFPSQGECSGSGCF*KRGPQR
Trigger: GCGTTGTGGACCTCGTTTCAAGAAACAACCAGAGCC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGAAGACTGGTGTGCGTaGGCAGATAGACGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPEDWCA*ADRRAG
Trigger: TCCAGCACGTCTATCTGCCAACGCACACCAGTCTTC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 90 bp GGCACTGAGTTCCACTGCCTGCTCTGGGGAACACAAGAGGTGGCCTaGCAAGAGGGCCTCCTTGATGTGCAAGAAAAAGATATGCCTAGT +
Preference number: 5 (lower is better)
Translates to: GTEFHCLLWGTQEVA*QEGLLDVQEKDMPS
Trigger: ACTAGGCATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCCCAGAGCAGGCAGTGGAACTCAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR CAA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCGCGGGGCTGCCGCCTaGTCACTGGTGGGACCCAGC +
Preference number: 5 (lower is better)
Translates to: PFETYRGDNPKLILKHLLRGAAA*SLVGPS
Trigger: GCTGGGTCCCACCAGTGACAAGGCGGCAGCCCCGCG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGCCAAGAGGGCCTCCTaGATGTGCAAGAAAAAGATA +
Preference number: 5 (lower is better)
Translates to: GSISHSASSAFPSQGECSAKRAS*MCKKKI
Trigger: TATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAGGGAGCCACCCACATaGAGTGAGCTGCTTTTTACT +
Preference number: 5 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPREPPT*SELLFT
Trigger: AGTAAAAAGCAGCTCACTCAATGTGGGTGGCTCCCT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTGGCTCCACGAAGAACTaGACTCTAAGTTTAAGCCTG +
Preference number: 5 (lower is better)
Translates to: GSISHSASSAFPSQGECSGSTKN*TLSLSL
Trigger: CAGGCTTAAACTTAGAGTCAAGTTCTTCGTGGAGCC...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS CCA 90 bp TGGCAGAGGAGAGCTCCTTGGCACAGAGCTCCTCATAGTTATACTTaGCAGTGTTCTGGTTGTAGTCTCCAAACTTGGTCTGGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: WQRRAPWHRAPHSYT*QCSGCSLQTWSGPG
Trigger: TCCTGGCCCAGACCAAGTTTGGAGACTACAACCAGAACACTGCCAAGTATAACTATGAGGAGCTCTGTGCCAAGGAGCTCTCCTCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCGCCAAGAGGGCCTCCTaGATGTGCAAGAAAAAGATA +
Preference number: 5 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPAKRAS*MCKKKI
Trigger: TATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGC...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGAGAGTGCTCTCCAACTCCTTATGTTTaGCAACAATGCTGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: GSISHSASSAFPSQGECSPTPYV*QQCCSR
Trigger: CCTTGAACAGCATTGTTGCAAAACATAAGGAGTTGG...AGAGCACTCTCCTTGGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCCTGTTCCCAGATTCCTaGGTGACCGTCAAATATACA +
Preference number: 5 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPLFPDS*VTVKYT
Trigger: TGTATATTTGACGGTCACCAAGGAATCTGGGAACAG...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGTACCCAACTTTTaGGCTATGTTGCCACTTCAC +
Preference number: 5 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPKVPNF*AMLPLH
Trigger: GTGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 90 bp TTCATGCTGCTTTCTGAGGACTTCAGAGGCGAGTGTGAAGGGCTCTaGTTGTTTCTTGAAACGAGGTCCACAACGCCAGCATTGTACAGA +
Preference number: 5 (lower is better)
Translates to: FMLLSEDFRGECEGL*LFLETRSTTPALYR
Trigger: TCTGTACAATGCTGGCGTTGTGGACCTCGTTTCAAGAAACAACCAGAGCCCTTCACACTCGCCTCTGAAGTCCTCAGAAAGCAGCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAACAGCCGCCTTCTCTTaGGTGTGCGCGGGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSTAAFS*VCAGLP
Trigger: CGGCAGCCCCGCGCACACCAAAGAGAAGGCGGCTGT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAAGGCAGTCCTCGCCGTaGGCTTTCGCCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSRQSSP*AFASTS
Trigger: GGAGGTGGAGGCGAAAGCCAACGGCGAGGACTGCCT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAAGGCTATAAAAGGCTaGAACAGTTCAAGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPKAIKG*NSSSKA
Trigger: TGCTTTGCTTGAACTGTTCAAGCCTTTTATAGCCTT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCACGCCTGCACACCTGGTaGAGGCAGTCCTCGCCGTTG +
Preference number: 5 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSRLHTW*RQSSPL
Trigger: CAACGGCGAGGACTGCCTCAACCAGGTGTGCAGGCG...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR CAA 90 bp GTTGTACACCATGAGGCTCCATCTCTCACTCAGCAAGCTCCGCTTTCCCTTCCCAGTCATCTTTACAAATaGAGATTCCTTCAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: VVHHEAPSLTQQAPLSLPSHLYK*RFLQVQ
Trigger: TTGGACCTGAAGGAATCTCAATTTGTAAAGATGACT...GGGAAGGGAAAGCGGAGCTTGCTGAGTGAGAGATGGAGCCTCATGGTGTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTTCCACAACGCCAGCATaGTACAGAGCCCTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: PFETYRGDNPKLILKHLLSTTPA*YRALLA
Trigger: TGCCAGGAGGGCTCTGTACAATGCTGGCGTTGTGGA...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTGGACAGAAGGTGGAGTaGATCTCCTCCTCGCAGCAC +
Preference number: 5 (lower is better)
Translates to: PFETYRGDNPKLILKHLLGQKVE*ISSSQH
Trigger: GTGCTGCGAGGAGGAGATCAACTCCACCTTCTGTCC...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS TCA 90 bp GCTGTTCCCAGATTCCTTGGTGACCGTCAAATATACATTCTTTCCTaGCTGGGTGGCCATCTGCACCACAGGATAAGCTATCCTATTAAT +
Preference number: 5 (lower is better)
Translates to: AVPRFLGDRQIYILS*LGGHLHHRISYPIN
Trigger: ATTAATAGGATAGCTTATCCTGTGGTGCAGATGGCCACCCAGTCAGGAAAGAATGTATATTTGACGGTCACCAAGGAATCTGGGAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS TCA 90 bp ATGCCAAGTCCAACAAAAGCACAACAGATTAGATTACAGTCAGATTaGGAAGACTGGTGTGCGTTGGCAGATAGACGTGCTGGACATGCT +
Preference number: 5 (lower is better)
Translates to: MPSPTKAQQIRLQSD*EDWCALADRRAGHA
Trigger: AGCATGTCCAGCACGTCTATCTGCCAACGCACACCAGTCTTCTCAATCTGACTGTAATCTAATCTGTTGTGCTTTTGTTGGACTTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCATCCACAACGCCAGCATaGTACAGAGCCCTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSSTTPA*YRALLA
Trigger: TGCCAGGAGGGCTCTGTACAATGCTGGCGTTGTGGA...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 90 bp GACATATTTCTTGCCAAGGTTAATGTTTTCATTCAGAAACAGAGATaGCAAGTGGCCCTTCAAGTCACGGCTATACTGCATCATCACGGC +
Preference number: 5 (lower is better)
Translates to: DIFLAKVNVFIQKQR*QVALQVTAILHHHG
Trigger: GCCGTGATGATGCAGTATAGCCGTGACTTGAAGGGCCACTTGGCATCTCTGTTTCTGAATGAAAACATTAACCTTGGCAAGAAATATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 90 bp GAAACGAGGTCCACAACGCCAGCATTGTACAGAGCCCTCCTGGCATaGTCATACACCTCCTTTGATGTTCTTTTAATATCAAAGACATAT +
Preference number: 5 (lower is better)
Translates to: ETRSTTPALYRALLA*SYTSFDVLLISKTY
Trigger: ATATGTCTTTGATATTAAAAGAACATCAAAGGAGGTGTATGACCATGCCAGGAGGGCTCTGTACAATGCTGGCGTTGTGGACCTCGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGAAGACTGGTGTGCGTaGGCAGATAGACGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSEDWCA*ADRRAG
Trigger: TCCAGCACGTCTATCTGCCAACGCACACCAGTCTTC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTAGGGAGCCACCCACATaGAGTGAGCTGCTTTTTACT +
Preference number: 5 (lower is better)
Translates to: PFETYRGDNPKLILKHLLREPPT*SELLFT
Trigger: AGTAAAAAGCAGCTCACTCAATGTGGGTGGCTCCCT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCTGTTCCCAGATTCCTaGGTGACCGTCAAATATACA +
Preference number: 5 (lower is better)
Translates to: PFETYRGDNPKLILKHLLLFPDS*VTVKYT
Trigger: TGTATATTTGACGGTCACCAAGGAATCTGGGAACAG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS TCA 90 bp AGGATAAGCTATCCTATTAATTGGGCTAAAGTCATCTTTACAAATTaGGATTCCTTCAGGTCCAACCCCAATGAGCAGTTTCTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: RISYPINWAKVIFTN*DSFRSNPNEQFLPF
Trigger: GAAGGGCAGAAACTGCTCATTGGGGTTGGACCTGAAGGAATCTCAATTTGTAAAGATGACTTTAGCCCAATTAATAGGATAGCTTATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCCAACTCCTTATGTTTaGCAACAATGCTGTTCAAGG +
Preference number: 5 (lower is better)
Translates to: PFETYRGDNPKLILKHLLPTPYV*QQCCSR
Trigger: CCTTGAACAGCATTGTTGCAAAACATAAGGAGTTGG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAGTTAACTACCCTCAGTaGTACACCATGAGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSVNYPQ*YTMRLH
Trigger: ATGGAGCCTCATGGTGTACAACTGAGGGTAGTTAAC...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTCATAAACTTTCACCTTaGCTACCCGTAAACTGCAGT +
Preference number: 5 (lower is better)
Translates to: PFETYRGDNPKLILKHLLHKLSP*LPVNCS
Trigger: ACTGCAGTTTACGGGTAGCAAAGGTGAAAGTTTATG...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS-3UTR CAA 90 bp CCCTTCGAAACATACAGAGGGGACAACCCAAAGTTAATACTTAAGCACTTACTTAGTCATCTTTACAAATaGAGATTCCTTCAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: PFETYRGDNPKLILKHLLSHLYK*RFLQVQ
Trigger: TTGGACCTGAAGGAATCTCAATTTGTAAAGATGACT...AAGTAAGTGCTTAAGTATTAACTTTGGGTTGTCCCCTCTGTATGTTTCGAAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS-3UTR CAA 90 bp TTACAACATCATTTCCTAAAAGGTACCCAACTTTTTGGCTATGTTGCCACTTCAAAGGCTATAAAAGGCTaGAACAGTTCAAGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: LQHHFLKGTQLFGYVATSKAIKG*NSSSKA
Trigger: TGCTTTGCTTGAACTGTTCAAGCCTTTTATAGCCTT...TGAAGTGGCAACATAGCCAAAAAGTTGGGTACCTTTTAGGAAATGATGTTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CAA 90 bp TGCCGCCACAGCCGCCTTCTCTTTGGTGTGCGCGGGGCTGCCGCCTaGTCACTGGTGGGACCCAGCCCCGGACTCGGAGAGGGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: CRHSRLLFGVRGAAA*SLVGPSPGLGEGWP
Trigger: GGGCCAGCCCTCTCCGAGTCCGGGGCTGGGTCCCACCAGTGACAAGGCGGCAGCCCCGCGCACACCAAAGAGAAGGCGGCTGTGGCGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 72 bp CCGCCACAGCCGCCTTCTCTTTGGTGTGCGCGGGGCTaGCGCCTTGTCACTGGTGGGACCCAGCCCCGGACT +
Preference number: 6 (lower is better)
Translates to: PPQPPSLWCARG*RLVTGGTQPRT
Trigger: AGTCCGGGGCTGGGTCCCACCAGTGACAAGGCGGCAGCCCCGCGCACACCAAAGAGAAGGCGGCTGTGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 72 bp TCTTTGGTGTGCGCGGGGCTGCCGCCTTGTCACTGGTaGGACCCAGCCCCGGACTCGGAGAGGGCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: SLVCAGLPPCHW*DPAPDSERAGP
Trigger: AGGGCCAGCCCTCTCCGAGTCCGGGGCTGGGTCCCACCAGTGACAAGGCGGCAGCCCCGCGCACACCAAAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 72 bp TCACTGGTGGGACCCAGCCCCGGACTCGGAGAGGGCTaGCCCTCGAAGGCTGCAGCTCTGCGGACCCTTGTC +
Preference number: 6 (lower is better)
Translates to: SLVGPSPGLGEG*PSKAAALRTLV
Trigger: GACAAGGGTCCGCAGAGCTGCAGCCTTCGAGGGCCAGCCCTCTCCGAGTCCGGGGCTGGGTCCCACCAGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 72 bp TTCTCTTTGGTGTGCGCGGGGCTGCCGCCTTGTCACTaGTGGGACCCAGCCCCGGACTCGGAGAGGGCTGGC +
Preference number: 6 (lower is better)
Translates to: FSLVCAGLPPCH*WDPAPDSERAG
Trigger: GCCAGCCCTCTCCGAGTCCGGGGCTGGGTCCCACCAGTGACAAGGCGGCAGCCCCGCGCACACCAAAGAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CAA 72 bp AGCCGCCTTCTCTTTGGTGTGCGCGGGGCTGCCGCCTaGTCACTGGTGGGACCCAGCCCCGGACTCGGAGAG +
Preference number: 6 (lower is better)
Translates to: SRLLFGVRGAAA*SLVGPSPGLGE
Trigger: CTCTCCGAGTCCGGGGCTGGGTCCCACCAGTGACAAGGCGGCAGCCCCGCGCACACCAAAGAGAAGGCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 72 bp CCTCGTCACATAACACAGCATGGCTGGGGCTGCCGCTaGCGCCACAGCCGCCTTCTCTTTGGTGTGCGCGGG +
Preference number: 6 (lower is better)
Translates to: PRHITQHGWGCR*RHSRLLFGVRG
Trigger: CCCGCGCACACCAAAGAGAAGGCGGCTGTGGCGGCAGCGGCAGCCCCAGCCATGCTGTGTTATGTGACGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 72 bp GTCCGGCCTCGTCACATAACACAGCATGGCTGGGGCTaGCGCTGCCGCCACAGCCGCCTTCTCTTTGGTGTG +
Preference number: 6 (lower is better)
Translates to: VRPRHITQHGWG*RCRHSRLLFGV
Trigger: CACACCAAAGAGAAGGCGGCTGTGGCGGCAGCGGCAGCCCCAGCCATGCTGTGTTATGTGACGAGGCCGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 72 bp GCAGATAGACGTGCTGGACATGCTCCACACGCGACCTaGAGACGGGACATGACTGTAGCTGGGCGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: ADRRAGHAPHAT*RRDMTVAGRRS
Trigger: GCTGCGCCGCCCAGCTACAGTCATGTCCCGTCTGCAGGTCGCGTGTGGAGCATGTCCAGCACGTCTATCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CAA 90 bp GCCTGCTCTGGGGAACACAAGAGGTGGCCTGCCAAGAGGGCCTCCTaGATGTGCAAGAAAAAGATATGCCTGGTTGAGGCAGTCCTCGCC +
Preference number: 6 (lower is better)
Translates to: ACSGEHKRWPAKRAS*MCKKKICLVEAVLA
Trigger: GGCGAGGACTGCCTCAACCAGGCATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCCCAGAGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349606.4
CDS CAA 90 bp CAGCTCTCACAGCACACAGTGTGGCCACAGGGACAGAAGGTGGAGTaGATCTCCTCCTCGCAGCACACCATGCACAGCATGGCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: QLSQHTVWPQGQKVE*ISSSQHTMHSMASF
Trigger: GAAGGAAGCCATGCTGTGCATGGTGTGCTGCGAGGAGGAGATCAACTCCACCTTCTGTCCCTGTGGCCACACTGTGTGCTGTGAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS TCA 72 bp AGCACACAGTGTGGCCACAGGGACAGAAGGTGGAGTTaGTCTCCTCCTCGCAGCACACCATGCACAGCATGG +
Preference number: 6 (lower is better)
Translates to: STQCGHRDRRWS*SPPRSTPCTAW
Trigger: CCATGCTGTGCATGGTGTGCTGCGAGGAGGAGATCAACTCCACCTTCTGTCCCTGTGGCCACACTGTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CAA 72 bp CAGCACACAGTGTGGCCACAGGGACAGAAGGTGGAGTaGATCTCCTCCTCGCAGCACACCATGCACAGCATG +
Preference number: 6 (lower is better)
Translates to: QHTVWPQGQKVE*ISSSQHTMHSM
Trigger: CATGCTGTGCATGGTGTGCTGCGAGGAGGAGATCAACTCCACCTTCTGTCCCTGTGGCCACACTGTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 72 bp CTGAGTTCCACTGCCTGCTCTGGGGAACACAAGAGGTaGCCTGCCAAGAGGGCCTCCTTGATGTGCAAGAAA +
Preference number: 6 (lower is better)
Translates to: LSSTACSGEHKR*PAKRASLMCKK
Trigger: TTTCTTGCACATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCCCAGAGCAGGCAGTGGAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 72 bp AGAGATGCCAAGTGGCCCTTCAAGTCACGGCTATACTaGATCATCACGGCGCTGGTCACTGTGTCACACCTG +
Preference number: 6 (lower is better)
Translates to: RDAKWPFKSRLY*IITALVTVSHL
Trigger: CAGGTGTGACACAGTGACCAGCGCCGTGATGATGCAGTATAGCCGTGACTTGAAGGGCCACTTGGCATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS TCA 72 bp GGGAACACAAGAGGTGGCCTGCCAAGAGGGCCTCCTTaGTGTGCAAGAAAAAGATATGCCTGGTTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: GNTRGGLPRGPP*CARKRYAWLRQ
Trigger: CTGCCTCAACCAGGCATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349606.4
CDS GCA 72 bp CACAAGAGGTGGCCTGCCAAGAGGGCCTCCTTGATGTaGAAGAAAAAGATATGCCTGGTTGAGGCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: HKRWPAKRASLM*KKKICLVEAVL
Trigger: GAGGACTGCCTCAACCAGGCATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349606.4
CDS CCA 72 bp CCTTCAAGTCACGGCTATACTGCATCATCACGGCGCTaGTCACTGTGTCACACCTGTAGAATGCGTGCGTCT +
Preference number: 6 (lower is better)
Translates to: PSSHGYTASSRR*SLCHTCRMRAS
Trigger: AGACGCACGCATTCTACAGGTGTGACACAGTGACCAGCGCCGTGATGATGCAGTATAGCCGTGACTTGAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CAA 72 bp GGGGAACACAAGAGGTGGCCTGCCAAGAGGGCCTCCTaGATGTGCAAGAAAAAGATATGCCTGGTTGAGGCA +
Preference number: 6 (lower is better)
Translates to: GEHKRWPAKRAS*MCKKKICLVEA
Trigger: TGCCTCAACCAGGCATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349606.4
CDS CAA 72 bp GGGGAACACAAGAGGTGGCCTGCCAAGAGGGCCTCCTaGATGTGCAAGAAAAAGATATGCCTAGTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GEHKRWPAKRAS*MCKKKICLVCS
Trigger: GGAGCAGACTAGGCATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356840.8
CDS CAA 90 bp TTTCTGAGGACTTCAGAGGCGAGTGTGAAGGGCTCTGGTTGTTTCTaGAAACGAGGTCCACAACGCCAGCATTGTACAGAGCCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: FLRTSEASVKGSGCF*KRGPQRQHCTEPSW
Trigger: CCAGGAGGGCTCTGTACAATGCTGGCGTTGTGGACCTCGTTTCAAGAAACAACCAGAGCCCTTCACACTCGCCTCTGAAGTCCTCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 72 bp CTTTCTGAGGACTTCAGAGGCGAGTGTGAAGGGCTCTaGTTGTTTCTTGAAACGAGGTCCACAACGCCAGCA +
Preference number: 6 (lower is better)
Translates to: LSEDFRGECEGL*LFLETRSTTPA
Trigger: TGCTGGCGTTGTGGACCTCGTTTCAAGAAACAACCAGAGCCCTTCACACTCGCCTCTGAAGTCCTCAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CAA 72 bp TGGTTGTTTCTTGAAACGAGGTCCACAACGCCAGCATaGTACAGAGCCCTCCTGGCATGGTCATACACCTCC +
Preference number: 6 (lower is better)
Translates to: WLFLETRSTTPA*YRALLAWSYTS
Trigger: GGAGGTGTATGACCATGCCAGGAGGGCTCTGTACAATGCTGGCGTTGTGGACCTCGTTTCAAGAAACAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CAA 90 bp GAAGGGCTCTGGTTGTTTCTTGAAACGAGGTCCACAACGCCAGCATaGTACAGAGCCCTCCTGGCATGGTCATACACCTCCTTTGATGTT +
Preference number: 6 (lower is better)
Translates to: EGLWLFLETRSTTPA*YRALLAWSYTSFDV
Trigger: AACATCAAAGGAGGTGTATGACCATGCCAGGAGGGCTCTGTACAATGCTGGCGTTGTGGACCTCGTTTCAAGAAACAACCAGAGCCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 72 bp GAGATTCCTTCAGGTCCAACCCCAATGAGCAGTTTCTaGCCTTCGCTATCCCGCACAGAATGCCATTCTATG +
Preference number: 6 (lower is better)
Translates to: EIPSGPTPMSSF*PSLSRTECHSM
Trigger: CATAGAATGGCATTCTGTGCGGGATAGCGAAGGGCAGAAACTGCTCATTGGGGTTGGACCTGAAGGAATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CAA 72 bp ACTTCAGAGGCGAGTGTGAAGGGCTCTGGTTGTTTCTaGAAACGAGGTCCACAACGCCAGCATTGTACAGAG +
Preference number: 6 (lower is better)
Translates to: TSEASVKGSGCF*KRGPQRQHCTE
Trigger: CTCTGTACAATGCTGGCGTTGTGGACCTCGTTTCAAGAAACAACCAGAGCCCTTCACACTCGCCTCTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 72 bp TTAGATTACAGTCAGATTGAGAAGACTGGTGTGCGTTaGCAGATAGACGTGCTGGACATGCTCCACACGCGA +
Preference number: 6 (lower is better)
Translates to: LDYSQIEKTGVR*QIDVLDMLHTR
Trigger: TCGCGTGTGGAGCATGTCCAGCACGTCTATCTGCCAACGCACACCAGTCTTCTCAATCTGACTGTAATCTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CAA 90 bp CTTCGCTATCCCGCACAGAATGCCATTCTATGCCATAGTTTTCCATaGCCGACACAATCTGCAAAACTTGGTATTCAGCTGAAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: LRYPAQNAILCHSFP*PTQSAKLGIQLKPG
Trigger: GCCAGGCTTCAGCTGAATACCAAGTTTTGCAGATTGTGTCGGCAATGGAAAACTATGGCATAGAATGGCATTCTGTGCGGGATAGCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 72 bp TCTGCCCTTCGCTATCCCGCACAGAATGCCATTCTATaGCATAGTTTTCCATTGCCGACACAATCTGCAAAA +
Preference number: 6 (lower is better)
Translates to: SALRYPAQNAIL*HSFPLPTQSAK
Trigger: TTTTGCAGATTGTGTCGGCAATGGAAAACTATGGCATAGAATGGCATTCTGTGCGGGATAGCGAAGGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 72 bp AGAGCTCCTTGGCACAGAGCTCCTCATAGTTATACTTaGCAGTGTTCTGGTTGTAGTCTCCAAACTTGGTCT +
Preference number: 6 (lower is better)
Translates to: RAPWHRAPHSYT*QCSGCSLQTWS
Trigger: AGACCAAGTTTGGAGACTACAACCAGAACACTGCCAAGTATAACTATGAGGAGCTCTGTGCCAAGGAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CAA 90 bp GTGCTGATCATTTTAAACAAGAGCACGATGCTGTTCCCAGATTCCTaGGTGACCGTCAAATATACATTCTTTCCTGACTGGGTGGCCATC +
Preference number: 6 (lower is better)
Translates to: VLIILNKSTMLFPDS*VTVKYTFFPDWVAI
Trigger: GATGGCCACCCAGTCAGGAAAGAATGTATATTTGACGGTCACCAAGGAATCTGGGAACAGCATCGTGCTCTTGTTTAAAATGATCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS TCA 72 bp AGATTCCTTGGTGACCGTCAAATATACATTCTTTCCTaGCTGGGTGGCCATCTGCACCACAGGATAAGCTAT +
Preference number: 6 (lower is better)
Translates to: RFLGDRQIYILS*LGGHLHHRISY
Trigger: ATAGCTTATCCTGTGGTGCAGATGGCCACCCAGTCAGGAAAGAATGTATATTTGACGGTCACCAAGGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CCA 72 bp TCCACAACGCCAGCATTGTACAGAGCCCTCCTGGCATaGTCATACACCTCCTTTGATGTTCTTTTAATATCA +
Preference number: 6 (lower is better)
Translates to: STTPALYRALLA*SYTSFDVLLIS
Trigger: TGATATTAAAAGAACATCAAAGGAGGTGTATGACCATGCCAGGAGGGCTCTGTACAATGCTGGCGTTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS CAA 72 bp CCCGCACAGAATGCCATTCTATGCCATAGTTTTCCATaGCCGACACAATCTGCAAAACTTGGTATTCAGCTG +
Preference number: 6 (lower is better)
Translates to: PAQNAILCHSFP*PTQSAKLGIQL
Trigger: CAGCTGAATACCAAGTTTTGCAGATTGTGTCGGCAATGGAAAACTATGGCATAGAATGGCATTCTGTGCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS GCA 72 bp CTTGCCAAGGTTAATGTTTTCATTCAGAAACAGAGATaGCAAGTGGCCCTTCAAGTCACGGCTATACTGCAT +
Preference number: 6 (lower is better)
Translates to: LAKVNVFIQKQR*QVALQVTAILH
Trigger: ATGCAGTATAGCCGTGACTTGAAGGGCCACTTGGCATCTCTGTTTCTGAATGAAAACATTAACCTTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8
CDS TCA 72 bp TATCCTATTAATTGGGCTAAAGTCATCTTTACAAATTaGGATTCCTTCAGGTCCAACCCCAATGAGCAGTTT +
Preference number: 6 (lower is better)
Translates to: YPINWAKVIFTN*DSFRSNPNEQF
Trigger: AAACTGCTCATTGGGGTTGGACCTGAAGGAATCTCAATTTGTAAAGATGACTTTAGCCCAATTAATAGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349606.4
ENST00000356840.8