Pregenerated sensors for MYL12A (Homo sapiens)
Ensembl gene IDs: ENSG00000101608Ensembl transcript IDs: ENST00000577510.5, ENST00000579226.5, ENST00000580353.1, ENST00000608786.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCCATGGCCTCGGATCCCAGAACCGGGGACCTGGCTGGCACACCTaGCCAGGTGCGCTACCGGCGCCAGGAGCCCCGCCGCCCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SHGLGSQNRGPGWHT*PGALPAPGAPPPSS Trigger: GCTGGAGGGCGGCGGGGCTCCTGGCGCCGGTAGCGCACCTGGGCAGGTGTGCCAGCCAGGTCCCCGGTTCTGGGATCCGAGGCCATGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS CCA 90 bp | GCCACTCCAAGCCATGGCCTCGGATCCCAGAACCGGGGACCTGGCTaGCACACCTGCCCAGGTGCGCTACCGGCGCCAGGAGCCCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: ATPSHGLGSQNRGPG*HTCPGALPAPGAPP Trigger: CGGCGGGGCTCCTGGCGCCGGTAGCGCACCTGGGCAGGTGTGCCAGCCAGGTCCCCGGTTCTGGGATCCGAGGCCATGGCTTGGAGTGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS CCA 90 bp | GTTTGGGCACAGGAGCGAAGTTCGGGTCTGGGCCACTCCAAGCCATaGCCTCGGATCCCAGAACCGGGGACCTGGCTGGCACACCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: VWAQERSSGLGHSKP*PRIPEPGTWLAHLP Trigger: GGGCAGGTGTGCCAGCCAGGTCCCCGGTTCTGGGATCCGAGGCCATGGCTTGGAGTGGCCCAGACCCGAACTTCGCTCCTGTGCCCAAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS CCA 90 bp | CATTTCCAGAGTTCCAAGTTTGGGCACAGGAGCGAAGTTCGGGTCTaGGCCACTCCAAGCCATGGCCTCGGATCCCAGAACCGGGGACCT | + |
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Preference number: 5 (lower is better) Translates to: HFQSSKFGHRSEVRV*ATPSHGLGSQNRGP Trigger: AGGTCCCCGGTTCTGGGATCCGAGGCCATGGCTTGGAGTGGCCCAGACCCGAACTTCGCTCCTGTGCCCAAACTTGGAACTCTGGAAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS CCA 90 bp | CTCAAGGCGCCAGTGAGCGAAGCCACATTTCCAGAGTTCCAAGTTTaGGCACAGGAGCGAAGTTCGGGTCTGGGCCACTCCAAGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: LKAPVSEATFPEFQV*AQERSSGLGHSKPW Trigger: CCATGGCTTGGAGTGGCCCAGACCCGAACTTCGCTCCTGTGCCCAAACTTGGAACTCTGGAAATGTGGCTTCGCTCACTGGCGCCTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS GCA 90 bp | CAGCTGCAACAACAGCTGCAGCAGGGGGACAACGGGCTACGTTTTTaGGCAAACCCTCTTGAATCGGGCAAGTTGACGTTAGAAACTAAA | + |
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Preference number: 5 (lower is better) Translates to: QLQQQLQQGDNGLRF*ANPLESGKLTLETK Trigger: TTTAGTTTCTAACGTCAACTTGCCCGATTCAAGAGGGTTTGCGCAAAAACGTAGCCCGTTGTCCCCCTGCTGCAGCTGTTGTTGCAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS TCA 90 bp | CACGAACCCCAACCCAATCCTAAGACAGGGTCACGAATCTGCTGGTaGTCCGGTGGGAAACACTGTTCCACACTTTACTCAAACCTTAGT | + |
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Preference number: 5 (lower is better) Translates to: HEPQPNPKTGSRICW*SGGKHCSTLYSNLS Trigger: ACTAAGGTTTGAGTAAAGTGTGGAACAGTGTTTCCCACCGGATCACCAGCAGATTCGTGACCCTGTCTTAGGATTGGGTTGGGGTTCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577510.5 ENST00000580353.1 |
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| CDS CCA 72 bp | CCCTCCAGCTGCCCCCGCGGAGACGGGTCCCCGGGATaGGTCTCACGCGCCCGAACGCGAGCGCCACTCACC | + |
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Preference number: 6 (lower is better) Translates to: PSSCPRGDGSPG*VSRARTRAPLT Trigger: GGTGAGTGGCGCTCGCGTTCGGGCGCGTGAGACCCATCCCGGGGACCCGTCTCCGCGGGGGCAGCTGGAGGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS GCA 72 bp | CTCGGATCCCAGAACCGGGGACCTGGCTGGCACACCTaGCCAGGTGCGCTACCGGCGCCAGGAGCCCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: LGSQNRGPGWHT*PGALPAPGAPP Trigger: CGGCGGGGCTCCTGGCGCCGGTAGCGCACCTGGGCAGGTGTGCCAGCCAGGTCCCCGGTTCTGGGATCCGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS CCA 72 bp | AGCCATGGCCTCGGATCCCAGAACCGGGGACCTGGCTaGCACACCTGCCCAGGTGCGCTACCGGCGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SHGLGSQNRGPG*HTCPGALPAPG Trigger: TCCTGGCGCCGGTAGCGCACCTGGGCAGGTGTGCCAGCCAGGTCCCCGGTTCTGGGATCCGAGGCCATGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS GCA 72 bp | TCCTTTCCGCAGATGGTTGCGTCCGTCCTGTGGCTTTaGCTGGCCGCACATTCCAGGGCACGGCGAAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: SFPQMVASVLWL*LAAHSRARRRA Trigger: CGCCCTTCGCCGTGCCCTGGAATGTGCGGCCAGGCAAAGCCACAGGACGGACGCAACCATCTGCGGAAAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579226.5 |
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| CDS CCA 72 bp | CCCCTATCCTTTCCGCAGATGGTTGCGTCCGTCCTGTaGCTTTGCCTGGCCGCACATTCCAGGGCACGGCGA | + |
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Preference number: 6 (lower is better) Translates to: PLSFPQMVASVL*LCLAAHSRARR Trigger: TCGCCGTGCCCTGGAATGTGCGGCCAGGCAAAGCCACAGGACGGACGCAACCATCTGCGGAAAGGATAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000579226.5 |
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| CDS CCA 72 bp | AGTTCCAAGTTTGGGCACAGGAGCGAAGTTCGGGTCTaGGCCACTCCAAGCCATGGCCTCGGATCCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: SSKFGHRSEVRV*ATPSHGLGSQN Trigger: GTTCTGGGATCCGAGGCCATGGCTTGGAGTGGCCCAGACCCGAACTTCGCTCCTGTGCCCAAACTTGGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS CAA 90 bp | GCTCAAGGCGCCAGTGAGCGAAGCCACATTTCCAGAGTTCCAAGTTaGGGCACAGGAGCGAAGTTCGGGTCTGGGCCACTCCAAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: AQGASERSHISRVPS*GTGAKFGSGPLQAM Trigger: CATGGCTTGGAGTGGCCCAGACCCGAACTTCGCTCCTGTGCCCAAACTTGGAACTCTGGAAATGTGGCTTCGCTCACTGGCGCCTTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS GCA 72 bp | CAACAGCTGCAGCAGGGGGACAACGGGCTACGTTTTTaGGCAAACCCTCTTGAATCGGGCAAGTTGACGTTA | + |
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Preference number: 6 (lower is better) Translates to: QQLQQGDNGLRF*ANPLESGKLTL Trigger: TAACGTCAACTTGCCCGATTCAAGAGGGTTTGCGCAAAAACGTAGCCCGTTGTCCCCCTGCTGCAGCTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS CAA 90 bp | GACAACGGGCTACGTTTTTGCGCAAACCCTCTTGAATCGGGCAAGTaGACGTTAGAAACTAAAATAGTCCCGGAGTCAGCTCTGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: DNGLRFCANPLESGK*TLETKIVPESALQG Trigger: CCCCTGCAGAGCTGACTCCGGGACTATTTTAGTTTCTAACGTCAACTTGCCCGATTCAAGAGGGTTTGCGCAAAAACGTAGCCCGTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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| CDS TCA 72 bp | CAACCCAATCCTAAGACAGGGTCACGAATCTGCTGGTaGTCCGGTGGGAAACACTGTTCCACACTTTACTCA | + |
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Preference number: 6 (lower is better) Translates to: QPNPKTGSRICW*SGGKHCSTLYS Trigger: TGAGTAAAGTGTGGAACAGTGTTTCCCACCGGATCACCAGCAGATTCGTGACCCTGTCTTAGGATTGGGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577510.5 ENST00000580353.1 |
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| CDS CAA 72 bp | CTACGTTTTTGCGCAAACCCTCTTGAATCGGGCAAGTaGACGTTAGAAACTAAAATAGTCCCGGAGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LRFCANPLESGK*TLETKIVPESA Trigger: AGCTGACTCCGGGACTATTTTAGTTTCTAACGTCAACTTGCCCGATTCAAGAGGGTTTGCGCAAAAACGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608786.1 |
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