Pregenerated sensors for MYL10 (Homo sapiens)
Ensembl gene IDs: ENSG00000106436Ensembl transcript IDs: ENST00000223167.5, ENST00000642629.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCTGAGTGTTTGCTGCCCCTaGATGTCGGGGAGACTTGTG | + |
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Preference number: 2 (lower is better) Translates to: SCFVPNRRTREAFFLQPLSVCCP*MSGRLV Trigger: CACAAGTCTCCCCGACATTCAGGGGCAGCAAACACT...CAGAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| 3UTR GCA 72 bp | TTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTaGAGCCTCTGGCTGCAAGAGCTCCCTGTCACACCC | + |
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Preference number: 3 (lower is better) Translates to: LSPTVGQGKPFS*SLWLQELPVTP Trigger: GGGTGTGACAGGGAGCTCTTGCAGCCAGAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | GGGAAGCCTTTTTCCTGCAGCCTCTGGCTGCAAGAGCTCCCTGTCACACCCCACCCGAGATCATGCCATTaGGCTCCAGCCTGGGCGACA | + |
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Preference number: 4 (lower is better) Translates to: GKPFSCSLWLQELPVTPHPRSCH*APAWAT Trigger: TGTCGCCCAGGCTGGAGCGCAATGGCATGATCTCGG...GTGGGGTGTGACAGGGAGCTCTTGCAGCCAGAGGCTGCAGGAAAAAGGCTTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR TCA 90 bp | GGGAAGCCTTTTTCCTGCAGCCTCTGGCTGCAAGAGCTCCCTGTCACACCCCACGGAGGGAGGATCACTTaGGGCCAGGAGTTTGAGACC | + |
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Preference number: 4 (lower is better) Translates to: GKPFSCSLWLQELPVTPHGGRIT*GQEFET Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATCCTCCCTCC...GTGGGGTGTGACAGGGAGCTCTTGCAGCCAGAGGCTGCAGGAAAAAGGCTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | CTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCTGGCCCGTTCATAGGGCATaGGATGGGGGTGTGGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: LALSPTVGQGKPFSCSLWPVHRA*DGGVAR Trigger: GCGAGCCACACCCCCATCGCATGCCCTATGAACGGG...CCAGAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CCA 90 bp | CAGCCTCTGGCTGCAAGAGCTCCCTGTCACACCCCACAACAGTGTTTGCTGCCCGGGACTGATCAAACATaGAGAAGACGTTGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QPLAARAPCHTPQQCLLPGTDQT*RRRWSW Trigger: CCAGCTCCAACGTCTTCTCCATGTTTGATCAGTCCC...GGGCAGCAAACACTGTTGTGGGGTGTGACAGGGAGCTCTTGCAGCCAGAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CCA 90 bp | GGGAAGCCTTTTTCCTGCAGCCTCTGGCTGCAAGAGCTCCCTGTCACACCCCACGTTGCCGCACACATCTaGGGGAAATGCTGCAAACAT | + |
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Preference number: 4 (lower is better) Translates to: GKPFSCSLWLQELPVTPHVAAHI*GKCCKH Trigger: ATGTTTGCAGCATTTCCCCCAGATGTGTGCGGCAAC...GTGGGGTGTGACAGGGAGCTCTTGCAGCCAGAGGCTGCAGGAAAAAGGCTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | CAGCCTCTGGCTGCAAGAGCTCCCTGTCACACCCCACAACAGTGTTTGCTGCCCCTCACTGAAGCGGTCTaGCTGGGTCATAAGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: QPLAARAPCHTPQQCLLPLTEAV*LGHKFF Trigger: GAAAAACTTATGACCCAGGCAGACCGCTTCAGTGAG...GGGCAGCAAACACTGTTGTGGGGTGTGACAGGGAGCTCTTGCAGCCAGAGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | CTGGCTGCAAGAGCTCCCTGTCACACCCCACAACAGTGTTTGCTGCCCCTGAATTTCTGTAGTCCAGGTTaGCGCACACATCTGGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LAARAPCHTPQQCLLPLNFCSPG*RTHLGE Trigger: TTCCCCCAGATGTGTGCGGCAACCTGGACTACAGAA...ATTCAGGGGCAGCAAACACTGTTGTGGGGTGTGACAGGGAGCTCTTGCAGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CCA 90 bp | CTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCTGGGAGAATGGTCTCCTCTaGGTCCGTGCCCTTCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LALSPTVGQGKPFSCSLWENGLL*VRALQL Trigger: AAGCTGAAGGGCACGGACCCAGAGGAGACCATTCTC...CCAGAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | TCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCTGGGCTCGCTTCTTCCATaGCCAGCTGCTCAAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: SCFVPNRRTREAFFLQPLGSLLP*PAAQTS Trigger: AGAGGTTTGAGCAGCTGGGCATGGAAGAAGCGAGCC...CAGAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | ATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCAGTGAGCCGAGATCATaGCATTGCGCTCCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ILALSPTVGQGKPFSCSLSEPRS*HCAPAW Trigger: CCAGGCTGGAGCGCAATGGCATGATCTCGGCTCACT...GAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CCA 90 bp | CTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCTGGAGAAGACGTTGGAGCTaGCGGTGCCTTCTGCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LALSPTVGQGKPFSCSLWRRRWS*RCLLLF Trigger: AAAGAGCAGAAGGCACCGCCAGCTCCAACGTCTTCT...CCAGAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCAGTGTTTGCTGCCCCTaGATGTCGGGGAGACTTGTG | + |
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Preference number: 4 (lower is better) Translates to: ILALSPTVGQGKPFSCSLSVCCP*MSGRLV Trigger: CACAAGTCTCCCCGACATTCAGGGGCAGCAAACACT...GAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | ATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCGCTGGCGGTGCCTTCTaGTCTTTTCCGAGCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ILALSPTVGQGKPFSCSLAGGAF*SFPSSS Trigger: AGAAGAGCTCGGAAAAGAGCAGAAGGCACCGCCAGC...GAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | CTGGCTGCAAGAGCTCCCTGTCACACCCCACAACAGTGTTTGCTGCCCCTGAATCACATCTGGGGGAAATaGTGCAAACATCTGCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: LAARAPCHTPQQCLLPLNHIWGK*CKHLLD Trigger: GTCAAGCAGATGTTTGCAGCATTTCCCCCAGATGTG...ATTCAGGGGCAGCAAACACTGTTGTGGGGTGTGACAGGGAGCTCTTGCAGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | CTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCTGGATCTGGGGGAAATGCTaGAAACATCTGCTTGACCTC | + |
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Preference number: 4 (lower is better) Translates to: LALSPTVGQGKPFSCSLWIWGKC*KHLLDL Trigger: GAGGTCAAGCAGATGTTTGCAGCATTTCCCCCAGAT...CCAGAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CCA 90 bp | TCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCTGATGATGGTGAAAGCTTaGGAGGCTGAGGCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SCFVPNRRTREAFFLQPLMMVKA*EAEAGE Trigger: TTCTCCTGCCTCAGCCTCCCAAGCTTTCACCATCAT...CAGAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | ATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCAATGCTGCAAACATCTaGTTGACCTCCTCCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: ILALSPTVGQGKPFSCSLNAANI*LTSSSL Trigger: CAGTGAGGAGGAGGTCAAGCAGATGTTTGCAGCATT...GAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | ATTATTTATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCGTTGGAGCTGGCGGTaGCTTCTGCTCTTTTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: IIYSCFVPNRRTREAFFLRWSWR*LLLFSE Trigger: CTCGGAAAAGAGCAGAAGGCACCGCCAGCTCCAACG...CAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAATAAATAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CCA 90 bp | TTATTTATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCACATGGAGAAGACGTTaGAGCTGGCGGTGCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LFILALSPTVGQGKPFSCTWRRR*SWRCLL Trigger: CAGAAGGCACCGCCAGCTCCAACGTCTTCTCCATGT...GCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAATAAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR TCA 90 bp | ATTATTTATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGGGCAGGAGAATTGCTTaGACCCGTGAGGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: IIYSCFVPNRRTREAFFLGRRIA*TREAEV Trigger: AACCTCTGCCTCACGGGTTCAAGCAATTCTCCTGCC...CAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAATAAATAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | ATTATTTATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGGGGAAGCCTTTTTCCTaGAGCCTCTGGCTGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: IIYSCFVPNRRTREAFFLGKPFS*SLWLQE Trigger: CTCTTGCAGCCAGAGGCTGCAGGAAAAAGGCTTCCC...CAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAATAAATAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CCA 90 bp | ATTATTTATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGTTTTCCTGCAGCCTCTaGCTGCAAGAGCTCCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: IIYSCFVPNRRTREAFFLFSCSL*LQELPV Trigger: GACAGGGAGCTCTTGCAGCCAGAGGCTGCAGGAAAA...CAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAATAAATAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR TCA 90 bp | ATTATTTATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGTGTCGAACACTTTaGAGGCGTGGAGAATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: IIYSCFVPNRRTREAFFLQCRTL*RRGEWS Trigger: AGACCATTCTCCACGCCTTCAAAGTGTTCGACACTG...CAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAATAAATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR TCA 90 bp | ATTATTTATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGTGTCGGGGAGACTTGTaGTCCCCTAATCCTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: IIYSCFVPNRRTREAFFLCRGDL*SPNPSL Trigger: AAGAGAAGGATTAGGGGATCACAAGTCTCCCCGACA...CAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAATAAATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR GCA 90 bp | ATTATTTATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGAGCATTATTTATTCTTaGTTTGTCCCCAACCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: IIYSCFVPNRRTREAFFLSIIYS*FVPNRR Trigger: CCTACGGTTGGGGACAAAGCAAGAATAAATAATGCT...CAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAATAAATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CAA 90 bp | GGGAAGCCTTTTTCCTGCAGCCTCTGGCTGCAAGAGCTCCCTGTCACACCCCACAGGAACACCGTGAAGTaGATGGGTCCGGGGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GKPFSCSLWLQELPVTPHRNTVK*MGPGAS Trigger: GGAGGCCCCCGGACCCATCAACTTCACGGTGTTCCT...GTGGGGTGTGACAGGGAGCTCTTGCAGCCAGAGGCTGCAGGAAAAAGGCTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CAA 90 bp | CAGCCTCTGGCTGCAAGAGCTCCCTGTCACACCCCACAACAGTGTTTGCTGCCCTCCAGTTCCTCGTTCTaGACATTGATGCGGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: QPLAARAPCHTPQQCLLPSSSSF*TLMRPS Trigger: GCTGGGCCGCATCAATGTCAAGAACGAGGAACTGGA...GGGCAGCAAACACTGTTGTGGGGTGTGACAGGGAGCTCTTGCAGCCAGAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CAA 90 bp | CAGCCTCTGGCTGCAAGAGCTCCCTGTCACACCCCACAACAGTGTTTGCTGCCCGCTGCAAACATCTGCTaGACCTCCTCCTCACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: QPLAARAPCHTPQQCLLPAANIC*TSSSLK Trigger: CTTCAGTGAGGAGGAGGTCAAGCAGATGTTTGCAGC...GGGCAGCAAACACTGTTGTGGGGTGTGACAGGGAGCTCTTGCAGCCAGAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CAA 90 bp | CTGGCTGCAAGAGCTCCCTGTCACACCCCACAACAGTGTTTGCTGCCCCTGAATAACATGGAGAAGACGTaGGAGCTGGCGGTGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LAARAPCHTPQQCLLPLNNMEKT*ELAVPS Trigger: AGAAGGCACCGCCAGCTCCAACGTCTTCTCCATGTT...ATTCAGGGGCAGCAAACACTGTTGTGGGGTGTGACAGGGAGCTCTTGCAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CAA 90 bp | TCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCTGTCCTCGTTCTTGACATaGATGCGGCCCAGCGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: SCFVPNRRTREAFFLQPLSSFLT*MRPSAA Trigger: TGCCGCGCTGGGCCGCATCAATGTCAAGAACGAGGA...CAGAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CAA 90 bp | CTGGCTGCAAGAGCTCCCTGTCACACCCCACAACAGTGTTTGCTGCCCCTGAATTTGATGACATCGGCCTaGACGAAACCTTTCCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LAARAPCHTPQQCLLPLNLMTSA*TKPFPS Trigger: TGAAGGGAAAGGTTTCGTCAAGGCCGATGTCATCAA...ATTCAGGGGCAGCAAACACTGTTGTGGGGTGTGACAGGGAGCTCTTGCAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS CCA 90 bp | GCTGCAAACATCTGCTTGACCTCCTCCTCACTGAAGCGGTCTGCCTaGGTCATAAGTTTTTCTTTGATGACATCGGCCTTGACGAAACCT | + |
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Preference number: 5 (lower is better) Translates to: AANICLTSSSLKRSA*VISFSLMTSALTKP Trigger: AGGTTTCGTCAAGGCCGATGTCATCAAAGAAAAACTTATGACCCAGGCAGACCGCTTCAGTGAGGAGGAGGTCAAGCAGATGTTTGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000223167.5 ENST00000642629.2 |
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| CDS-3UTR CAA 90 bp | CTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGCAGCCTCTGGTTATTTATTCTTGCTTaGTCCCCAACCGTAGGACAA | + |
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Preference number: 5 (lower is better) Translates to: LALSPTVGQGKPFSCSLWLFILA*SPTVGQ Trigger: TTGTCCTACGGTTGGGGACAAAGCAAGAATAAATAA...CCAGAGGCTGCAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS-3UTR CAA 90 bp | ATTATTTATTCTTGCTTTGTCCCCAACCGTAGGACAAGGGAAGCCTTTTTCCTGTCAGTGTCGAACACTTaGAAGGCGTGGAGAATGGTC | + |
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Preference number: 5 (lower is better) Translates to: IIYSCFVPNRRTREAFFLSVSNT*KAWRMV Trigger: GACCATTCTCCACGCCTTCAAAGTGTTCGACACTGA...CAGGAAAAAGGCTTCCCTTGTCCTACGGTTGGGGACAAAGCAAGAATAAATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223167.5 |
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| CDS GCA 72 bp | GTAGTCCAGGTTGCCGCACACATCTGGGGGAAATGCTaGAAACATCTGCTTGACCTCCTCCTCACTGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: VVQVAAHIWGKC*KHLLDLLLTEA Trigger: CGCTTCAGTGAGGAGGAGGTCAAGCAGATGTTTGCAGCATTTCCCCCAGATGTGTGCGGCAACCTGGACTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000223167.5 ENST00000642629.2 |
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| CDS GCA 72 bp | AAACATCTGCTTGACCTCCTCCTCACTGAAGCGGTCTaGCTGGGTCATAAGTTTTTCTTTGATGACATCGGC | + |
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Preference number: 6 (lower is better) Translates to: KHLLDLLLTEAV*LGHKFFFDDIG Trigger: GCCGATGTCATCAAAGAAAAACTTATGACCCAGGCAGACCGCTTCAGTGAGGAGGAGGTCAAGCAGATGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000223167.5 ENST00000642629.2 |
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