RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYH15 (Homo sapiens)

Ensembl gene IDs: ENSG00000144821

Ensembl transcript IDs: ENST00000273353.4, ENST00000478998.5, ENST00000495753.2

Found 393 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTaGCAGGAGCTGGAAGAGCTCTGGGTCCAGGGAGCTGTCTCTGGT +
Preference number: 1 (lower is better)
Translates to: CTHTWPVLCKAEGGG*QELEELWVQGAVSG
Trigger: ACCAGAGACAGCTCCCTGGACCCAGAGCTCTTCCAGCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 90 bp TCTCACGGCCTCCACTGCAATGCTGTGTGTGATCTCAGGAAAAGCTaGTGCTGGTTGCCATGGAGCTGCACACACACCTGGCCAGTACTT +
Preference number: 1 (lower is better)
Translates to: SHGLHCNAVCDLRKS*CWLPWSCTHTWPVL
Trigger: AAGTACTGGCCAGGTGTGTGTGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGCAGTGGAGGCCGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 90 bp ACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTGTGTGTaGTCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCACACA +
Preference number: 1 (lower is better)
Translates to: TEPMSVSRPPLQCCV*SQEKLMLVAMELHT
Trigger: TGTGTGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR GCA 90 bp AGAGGAATTCCGGGACATGTTCCTCCAGCTGAGCCAAATCGGTACTaGACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGG +
Preference number: 1 (lower is better)
Translates to: RGIPGHVPPAEPNRY*TNPAYYLSLNVSCG
Trigger: CCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGTGCAGTACCGATTTGGCTCAGCTGGAGGAACATGTCCCGGAATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 90 bp TCCAGAACCATGAGAGAGAGGAATTCCGGGACATGTTCCTCCAGCTaGGCCAAATCGGTACTGCACAAATCCAGCATATTACCTGTCACT +
Preference number: 1 (lower is better)
Translates to: SRTMRERNSGTCSSS*AKSVLHKSSILPVT
Trigger: AGTGACAGGTAATATGCTGGATTTGTGCAGTACCGATTTGGCTCAGCTGGAGGAACATGTCCCGGAATTCCTCTCTCTCATGGTTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 90 bp CTGAGCCAAATCGGTACTGCACAAATCCAGCATATTACCTGTCACTaGATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCA +
Preference number: 1 (lower is better)
Translates to: LSQIGTAQIQHITCH*MSRVGLPPCLKHVP
Trigger: TGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGTGCAGTACCGATTTGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR CCA 90 bp GTAAAAACCATTCACCAACATGCCCTAGTCCCCATGAAGCGTGACTaGTCTAAGGACATCTTCTATGAGTCCTACCCATTAAGAGGAAAT +
Preference number: 1 (lower is better)
Translates to: VKTIHQHALVPMKRD*SKDIFYESYPLRGN
Trigger: ATTTCCTCTTAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTGAATGGTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 90 bp CAAATTAATGCAAATTTCTTTATGACCTACTCCAATCCAGAACCATaGGAGAGAGGAATTCCGGGACATGTTCCTCCAGCTGAGCCAAAT +
Preference number: 1 (lower is better)
Translates to: QINANFFMTYSNPEP*ERGIPGHVPPAEPN
Trigger: ATTTGGCTCAGCTGGAGGAACATGTCCCGGAATTCCTCTCTCTCATGGTTCTGGATTGGAGTAGGTCATAAAGAAATTTGCATTAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR GCA 90 bp CTCACAATATACATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTaGCTAACTTTAGTAAAAACCATTCACCAACATGCCCTAGTCCCC +
Preference number: 1 (lower is better)
Translates to: LTIYIHRFRGESSQS*LTLVKTIHQHALVP
Trigger: GGGGACTAGGGCATGTTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAATGTATATTGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 90 bp CTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACTaGCCTTATGAGTATAAAATAGCTGCTGATCAAATTAATGCAAAT +
Preference number: 1 (lower is better)
Translates to: LESYFQAVTMLGSVH*PYEYKIAADQINAN
Trigger: ATTTGCATTAATTTGATCAGCAGCTATTTTATACTCATAAGGTCAGTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 90 bp ACATGTTCAAATTGCCTAACTATAGCTATATTTATATCACAATGCTaGGGAGATCTTATGACTTCCATTCTACCACTGCTGGCTCACAAT +
Preference number: 1 (lower is better)
Translates to: TCSNCLTIAIFISQC*GDLMTSILPLLAHN
Trigger: ATTGTGAGCCAGCAGTGGTAGAATGGAAGTCATAAGATCTCCTCAGCATTGTGATATAAATATAGCTATAGTTAGGCAATTTGAACATGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR GCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAACCTGGCCAGTACTTTaGAAAGCTGAAGGAGGAGGC +
Preference number: 2 (lower is better)
Translates to: AMLCVISGKADAGCHGAATWPVL*KAEGGG
Trigger: GCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGT...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR TCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTGATCTCAGGAAAAGCTaGTGCTGGTTGCCATGGAGC +
Preference number: 2 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNADLRKS*CWLPWS
Trigger: GCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATC...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR CCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAAGCTGTCACCATGCTTaGGTCTGTACACTGACCTTA +
Preference number: 2 (lower is better)
Translates to: AMLCVISGKADAGCHGAASCHHA*VCTLTL
Trigger: TAAGGTCAGTGTACAGACCCAAGCATGGTGACAGCT...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR TCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCATTTATATCACAATGCTaGGGAGATCTTATGACTTCC +
Preference number: 2 (lower is better)
Translates to: AMLCVISGKADAGCHGAAFISQC*GDLMTS
Trigger: GGAAGTCATAAGATCTCCTCAGCATTGTGATATAAA...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR TCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTATGCAAATTTCTTTATaGCCTACTCCAATCCAGAAC +
Preference number: 2 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFMQISL*PTPIQN
Trigger: GTTCTGGATTGGAGTAGGTCATAAAGAAATTTGCAT...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR CCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTACCCATGAAGCGTGACTaGTCTAAGGACATCTTCTAT +
Preference number: 2 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLPMKRD*SKDIFY
Trigger: ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGG...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR GCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACCTTCCATTCTACCACTaGTGGCTCACAATATACATT +
Preference number: 2 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHLPFYH*WLTIYI
Trigger: AATGTATATTGTGAGCCAGCAGTGGTAGAATGGAAG...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR CCA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACCATTCTACCACTGCTaGCTCACAATATACATTCAT +
Preference number: 2 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTPFYHC*LTIYIH
Trigger: ATGAATGTATATTGTGAGCCAGCAGTGGTAGAATGG...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR GCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGGAATCAAGCCAAAGTTaGCTAACTTTAGTAAAAACC +
Preference number: 2 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMESSQS*LTLVKT
Trigger: GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTC...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 72 bp CTCCACTGCAATGCTGTGTGTGATCTCAGGAAAAGCTaGTGCTGGTTGCCATGGAGCTGCACACACACCTGG +
Preference number: 3 (lower is better)
Translates to: LHCNAVCDLRKS*CWLPWSCTHTW
Trigger: CCAGGTGTGTGTGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGCAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 72 bp ATGTCTGTCTCACGGCCTCCACTGCAATGCTGTGTGTaGTCTCAGGAAAAGCTGATGCTGGTTGCCATGGAG +
Preference number: 3 (lower is better)
Translates to: MSVSRPPLQCCV*SQEKLMLVAME
Trigger: CTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGCAGTGGAGGCCGTGAGACAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR GCA 72 bp CCGGGACATGTTCCTCCAGCTGAGCCAAATCGGTACTaGACAAATCCAGCATATTACCTGTCACTGAATGTC +
Preference number: 3 (lower is better)
Translates to: PGHVPPAEPNRY*TNPAYYLSLNV
Trigger: GACATTCAGTGACAGGTAATATGCTGGATTTGTGCAGTACCGATTTGGCTCAGCTGGAGGAACATGTCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR CAA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACAGTACTTCTCCAGCTGTaGTCCTTTCAAAGCAGGGGA +
Preference number: 3 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTVLLQL*SFQSRG
Trigger: TCCCCTGCTTTGAAAGGACAACAGCTGGAGAAGTAC...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR CAA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGGAAACAGCACCTTCCTaGTACTTCTCCAGCTGTTGT +
Preference number: 3 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMETAPS*YFSSCC
Trigger: ACAACAGCTGGAGAAGTACAAGGAAGGTGCTGTTTC...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR GCA 72 bp ATTTATTATAGAGCTTCAGCCTTACACAATTGTGGGTaGTGGTGGAGAAGTCTAGGCCAGGCTGTTCCCTCT +
Preference number: 3 (lower is better)
Translates to: IYYRASALHNCG*WWRSLGQAVPS
Trigger: AGAGGGAACAGCCTGGCCTAGACTTCTCCACCAGCACCCACAATTGTGTAAGGCTGAAGCTCTATAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR CCA 72 bp ATTCACCAACATGCCCTAGTCCCCATGAAGCGTGACTaGTCTAAGGACATCTTCTATGAGTCCTACCCATTA +
Preference number: 3 (lower is better)
Translates to: IHQHALVPMKRD*SKDIFYESYPL
Trigger: TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 72 bp GCAAATTTCTTTATGACCTACTCCAATCCAGAACCATaGGAGAGAGGAATTCCGGGACATGTTCCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: ANFFMTYSNPEP*ERGIPGHVPPA
Trigger: AGCTGGAGGAACATGTCCCGGAATTCCTCTCTCTCATGGTTCTGGATTGGAGTAGGTCATAAAGAAATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR CAA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGATGCAACCTAAGTTTTaGGCCATGAAACAGCACCTT +
Preference number: 3 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMMQPKF*AMKQHL
Trigger: AAGGTGCTGTTTCATGGCCAAAAACTTAGGTTGCAT...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 72 bp ATCGGTACTGCACAAATCCAGCATATTACCTGTCACTaGATGTCTCGTGTGGGGTTACCTCCATGTTTAAAG +
Preference number: 3 (lower is better)
Translates to: IGTAQIQHITCH*MSRVGLPPCLK
Trigger: CTTTAAACATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGTGCAGTACCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR-3UTR CAA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTATTGATTAGGAGAGTTTaGCCTACATGTTCAAATTGC +
Preference number: 3 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLLIRRV*PTCSNC
Trigger: GCAATTTGAACATGTAGGCAAAACTCTCCTAATCAA...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR TCA 72 bp TTAAAAATGTTTCCATGCAACCTAAGTTTTTGGCCATaGAACAGCACCTTCCTTGTACTTCTCCAGCTGTTG +
Preference number: 3 (lower is better)
Translates to: LKMFPCNLSFWP*NSTFLVLLQLL
Trigger: CAACAGCTGGAGAAGTACAAGGAAGGTGCTGTTTCATGGCCAAAAACTTAGGTTGCATGGAAACATTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR GCA 72 bp TTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATaGTTGGGTCTGTACACTGACCTTATGAGTATAAAA +
Preference number: 3 (lower is better)
Translates to: FLAWSHIFKLSP*LGLYTDLMSIK
Trigger: TTTTATACTCATAAGGTCAGTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
3UTR GCA 72 bp TACATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTaGCTAACTTTAGTAAAAACCATTCACCAACATGCC +
Preference number: 3 (lower is better)
Translates to: YIHRFRGESSQS*LTLVKTIHQHA
Trigger: GGCATGTTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCTCCCCTCTGGGCCTCTaGACTGCGACGGATTTCACC +
Preference number: 4 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSSPLGL*TATDFT
Trigger: GGTGAAATCCGTCGCAGTGCAGAGGCCCAGAGGGGA...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCCAGCTTCACTTCTTCTaGGGAAGGCTGCGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSQLHFF*GRLRLL
Trigger: GAGAAGCCGCAGCCTTCCTCAGAAGAAGTGAAGCTG...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTCTGGTCCAGCCTGGCTaGTGCAGAGCGGACCTTCCC +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNALVQPG*CRADLP
Trigger: GGGAAGGTCCGCTCTGCAGCAGCCAGGCTGGACCAG...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGCTGCGGGCTCCCCTCTaGGCCTCTGCACTGCGACGG +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMLRAPL*ASALRR
Trigger: CCGTCGCAGTGCAGAGGCCCAGAGGGGAGCCCGCAG...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAAGGGCCTTGCCAGACTaGAGCTGCTTCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAARALPD*SCFWSS
Trigger: GCTGGACCAGAAGCAGCTGCAGTCTGGCAAGGCCCT...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAGACTCCTCGTGCTTCTaGTTCCAGTCGGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAADSSCF*FQSARA
Trigger: GGCCCTTGCCGACTGGAAGCAGAAGCACGAGGAGTC...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAGCATCCAGCAACGCCTaGGACTCCTCGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAAASSNA*DSSCFC
Trigger: GCAGAAGCACGAGGAGTCCCAGGCGTTGCTGGATGC...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCGCAAAAGTGGAAGTCTaGGGGATTTGCAGATACCAG +
Preference number: 4 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSAKVEV*GICRYQ
Trigger: CTGGTATCTGCAAATCCCTCAGACTTCCACTTTTGC...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTAGGTCACAGTCACGCTaGGCCTTCTGCAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNARSQSR*AFCRAW
Trigger: CCATGCCCTGCAGAAGGCTCAGCGTGACTGTGACCT...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTACAGGAGCTCTTCTTCTaGCAGCCTGCGGCCACGCTC +
Preference number: 4 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLQELFF*QPAATL
Trigger: GAGCGTGGCCGCAGGCTGTCAGAAGAAGAGCTCCTG...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAAGTCGGCAAGGGCCTTaGCAGACTGCAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAASRQGP*QTAAAS
Trigger: AGAAGCAGCTGCAGTCTGGCAAGGCCCTTGCCGACT...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCGAATCCAGACTAGACTaGAGGGAGTCAATGGTACAC +
Preference number: 4 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSESRLD*RESMVH
Trigger: GTGTACCATTGACTCCCTGCAGTCTAGTCTGGATTC...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCATCTGCCAGGTGTCGCTaGCTGCTTTCCAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAASARCR*LLSRFS
Trigger: GGAGAACCTGGAAAGCAGCCAGCGACACCTGGCAGA...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTGCTGCAGCTGGTGCCTaGCTCTCTCCAAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAAAAGA*LSPRRH
Trigger: ATGCCTCCTTGGAGAGAGCCAGGCACCAGCTGCAGC...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTACATCCAGGGCCCTGTTaGTCCGTGCCACTAGCCACT +
Preference number: 4 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLHPGPC*SVPLAT
Trigger: AGTGGCTAGTGGCACGGATCAACAGGGCCCTGGATG...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTCAGCCAGGTCTTGGGTaGGGTCAGCTCTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFQPGLG*GQLSPF
Trigger: AAAGGGAGAGAGCTGACCTCACCCAAGACCTGGCTG...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCTGTTCTTCCTCATACTaGTCTCGTAGAAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSCSSSY*SRRRSQ
Trigger: CTGTGACCTTCTACGAGAGCAGTATGAGGAAGAACA...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTTTGCCAGACTGCAGCTaGTTCTGGTCCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNALPDCS*FWSSLA
Trigger: AGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGCAA...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTCGGCCACGCTCTGTCTaGTCTTGCAGGGACCTTAGA +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFRPRSV*SCRDLR
Trigger: TCTAAGGTCCCTGCAAGAGCAGACAGAGCGTGGCCG...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATAGGCATTTCTGGCATTaGCCACCCCCATGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYRHFWH*PPPWLR
Trigger: CCGAAGCCATGGGGGTGGCCAATGCCAGAAATGCCT...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTCCAAGGAGGCATTTCTaGCATTGGCCACCCCCATGG +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFPRRHF*HWPPPW
Trigger: CCATGGGGGTGGCCAATGCCAGAAATGCCTCCTTGG...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTGCACGGATGCCTCATTaGGGTGAGTCAGCATTGCCA +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAARMPH*GESALP
Trigger: TGGCAATGCTGACTCACCTCAATGAGGCATCCGTGC...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGGATTTGGTTGCTTCTaGCACCTGCCGGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYGFGCF*HLPVGT
Trigger: TGTGCCAACCGGCAGGTGTCAGAAGCAACCAAATCC...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCAGCCTACATGTGTGTTaGTTAGGAGAGTTTTGCCTA +
Preference number: 4 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSSLHVC*LGEFCL
Trigger: TAGGCAAAACTCTCCTAATCAACACACATGTAGGCT...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTACGCCGCTTCAGGGTATaGAGCACGGATGCCTCATTG +
Preference number: 4 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLRRFRV*STDASL
Trigger: CAATGAGGCATCCGTGCTGCATACCCTGAAGCGGCG...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTTTTCCTCAGCTCTTCTaGCAGGTGTCGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFFPQLF*QVSLAA
Trigger: AGCAGCCAGCGACACCTGGCAGAAGAGCTGAGGAAA...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCAGTTTCTGCTTGACCTaGTGTAGATTTTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSSFCLT*CRFSTW
Trigger: CCAGGTAGAAAATCTACAGCAGGTCAAGCAGAAACT...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTCCCCATGGCTTCGGCTaGCTCCTGCAATCTAATTGC +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFPHGFG*LLQSNC
Trigger: GCAATTAGATTGCAGGAGGCAGCCGAAGCCATGGGG...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGTTGCTTCTGACACCTaGCGGTTGGCACAGCTAAGC +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYVASDT*RLAQLS
Trigger: GCTTAGCTGTGCCAACCGGCAGGTGTCAGAAGCAAC...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTATGCATCGCTCAAGTCTaGGGGCTCCCCTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLCIAQV*GLPSGP
Trigger: AGGCCCAGAGGGGAGCCCGCAGACTTGAGCGATGCA...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCATCCCATCCAAGGCTGTaGCCTGTAGTAGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAASHPRL*PVVEAA
Trigger: AGCTGCTTCTACTACAGGCCACAGCCTTGGATGGGA...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATAAGTCAGCCAGGTCTTaGGTGAGGTCAGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYKSARS*VRSALS
Trigger: GGAGAGAGCTGACCTCACCCAAGACCTGGCTGACTT...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATCCAGCTGAGCCAAACTaGATCCTCCTACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYPAEPN*ILLPPP
Trigger: TGGAGGAGGTAGGAGGATCCAGTTTGGCTCAGCTGG...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTACATTGGCCACCCCCATaGCTTCGGCTGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLHWPPP*LRLPPA
Trigger: TGCAGGAGGCAGCCGAAGCCATGGGGGTGGCCAATG...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACAGTGAGGGGGAGCCTCTaGTCGCCTCTTCCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTVRGSL*SPLPFV
Trigger: TACAAAGGGAAGAGGCGATCAGAGGCTCCCCCTCAC...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATTTGGATAAGGTCCGGTaGAGCTCAGCCTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYLDKVR*SSALTS
Trigger: AGAGGTCAAGGCTGAGCTGCACCGGACCTTATCCAA...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTTCAGCCACAGCCACCTaGTCCTTCAGATCACTGTTC +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNASATAT*SFRSLF
Trigger: GAACAGTGATCTGAAGGAGCAGGTGGCTGTGGCTGA...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGTCTGGGCCTCTGCACTaGGACGGATTTCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMSGPLH*DGFHPP
Trigger: TGGAGGGTGAAATCCGTCGCAGTGCAGAGGCCCAGA...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTTCTCACGGCCTCCACTaGAATGCTGTGTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFSHGLH*NAVCDL
Trigger: GAGATCACACACAGCATTGCAGTGGAGGCCGTGAGA...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATAGCCCAAGATGTCCATaGCTTGTTCTGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYSPRCP*LVLWPA
Trigger: TGCTGGCCACAGAACAAGCCATGGACATCTTGGGCT...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCAGTTGCTCTTTTCCCTaGAAAGTTGGTTTATCAGAG +
Preference number: 4 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSSCSFP*KVGLSE
Trigger: CTCTGATAAACCAACTTTCCAGGGAAAAGAGCAACT...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTACTGCAGGGAGTCAATaGTACACTGCTGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNATAGSQ*YTAASS
Trigger: GGAGGAAGCAGCAGTGTACCATTGACTCCCTGCAGT...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACAGAGCTGGAAGAGCTCTaGGTCCAGGGAGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTELEEL*VQGAVS
Trigger: AGAGACAGCTCCCTGGACCCAGAGCTCTTCCAGCTC...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCTTCTTCTCCTACTTCTaGAGATTTAACAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSFFSYF*RFNKRL
Trigger: AAGCCTCTTGTTAAATCTTCAGAAGTAGGAGAAGAA...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACCTTTGCTCAGGCTGCTaGGCTTCTCCTCCTCCATGT +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHLCSGC*ASPPPC
Trigger: ACATGGAGGAGGAGAAGCTCAGCAGCCTGAGCAAAG...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTAATCTGGTTCTGGGCCTaGAGTCACTGTAGGTCGACT +
Preference number: 4 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLIWFWA*SHCRST
Trigger: AGTCGACCTACAGTGACTTCAGGCCCAGAACCAGAT...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAGAAGTTGTCTCAAAGTaGAGAGTGGCCTCTTCCATG +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAAEVVSK*RVASSM
Trigger: CATGGAAGAGGCCACTCTGCACTTTGAGACAACTTC...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTAGCTTCGGCTGCCTCCTaGAATCTAATTGCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLASAAS*NLIASS
Trigger: GGAACTGGCAATTAGATTGCAGGAGGCAGCCGAAGC...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTCTCTCTCCAGCCTGCTaGAAAATCACCCTGGACTTT +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNALSPAC*KITLDF
Trigger: AAAGTCCAGGGTGATTTTCCAGCAGGCTGGAGAGAG...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCATTTCATACATTGACTTaGACAGGGCACCGACAGCAC +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAAFHTLT*TGHRQH
Trigger: GTGCTGTCGGTGCCCTGTCCAAGTCAATGTATGAAA...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATTCTCCCTTTCCATCTTaGCTCGAGTGGTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYSPFPS*LEWSFQ
Trigger: CTGAAAGGACCACTCGAGCCAAGATGGAAAGGGAGA...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACAGGGCACTCTGGGATTTaGTCTCCTTTTCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTGHSGI*SPFPAA
Trigger: GGCAGCTGGAAAAGGAGACCAAATCCCAGAGTGCCC...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAGCTGGCCCAGGGATTTaGTTGCTTCTGACACCTGCC +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLAGPGI*LLLTPA
Trigger: GGCAGGTGTCAGAAGCAACCAAATCCCTGGGCCAGC...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTCTCCCTCTGAAACTCTaGTTTCTCCAAGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFLPLKL*FLQGFL
Trigger: CAGAAAGCCTTGGAGAAATCAGAGTTTCAGAGGGAG...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACATCCTCTAGTTCAGACTaGAGAAGAGAGTTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTSSSSD*RRELRR
Trigger: GCGGCGCAACTCTCTTCTTCAGTCTGAACTAGAGGA...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTGCTGAGGAGATCTTATaGCTTCCATTCTACCACTGC +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFAEEIL*LPFYHC
Trigger: GCAGTGGTAGAATGGAAGTCATAAGATCTCCTCAGC...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATCTGCAATGCTGTGTGTaGTCTCAGGAAAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYLQCCV*SQEKLM
Trigger: CATCAGCTTTTCCTGAGATCACACACAGCATTGCAG...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCTTTAGCATTTCCAAATaGTTCCAAGATAGTATTCGC +
Preference number: 4 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSFSISK*FQDSIR
Trigger: GCGAATACTATCTTGGAAGCATTTGGAAATGCTAAA...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTCATCAGTTTGCCCTGTaGTCTGGCTTGGAACAATGT +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFHQFAL*SGLEQC
Trigger: ACATTGTTCCAAGCCAGAGCACAGGGCAAACTGATG...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTATCAGCCACTCGCACTaGTCTTCAACATTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAISHSH*SSTFAS
Trigger: ACTGGCAAATGTTGAAGAGCAGTGCGAGTGGCTGAT...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATTTGCCCTCCAGTTTGTaGAGTTCCCTTTCACAGTTC +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYLPSSL*SSLSQF
Trigger: GAACTGTGAAAGGGAACTGCACAAACTGGAGGGCAA...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCACTCAGGTCTTCAATCTaGCGAGTGAAGTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAALRSSI*RVKLLF
Trigger: AAAGAGCAACTTCACTCGGCAGATTGAAGACCTGAG...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAAGTCCAGCCTGGCTGCTaGAGAGCGGACCTTCCCGAG +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQVQPGC*RADLPE
Trigger: CTCGGGAAGGTCCGCTCTGCAGCAGCCAGGCTGGAC...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCACACTGTTCAGTTGTGTaGTGTCATCCAGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAAHCSVV*CHPAAF
Trigger: AAATGCAGCTGGATGACAGCACACAACTGAACAGTG...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACTGCTGCCTCAATGGCTaGCTTCTTGGCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHCCLNG*LLGLLF
Trigger: GAAGAGAAGGCCAAGAAGGCAGCCATTGAGGCAGCA...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTCCCCCTGCTTTTTCCTaGATTCAATCATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAPPAFS*IQSWLL
Trigger: TAGCAGCCATGATTGAATCCAGGAAAAAGCAGGGGG...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTTCTTCTTATCAGGCTTaGGCTTCTGGAGATGAACCG +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNASSYQA*ASGDEP
Trigger: CGGTTCATCTCCAGAAGCCCAAGCCTGATAAGAAGA...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCATCGCCAGGAGTCTGTTaGAAGACTTCTGAAATACAG +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAASPGVC*KTSEIQ
Trigger: CTGTATTTCAGAAGTCTTCCAACAGACTCCTGGCGA...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACCGAGTTTCCGCCCCCTaGCAGTCAGCTCAGAATTTA +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHRVSAP*QSAQNL
Trigger: TAAATTCTGAGCTGACTGCCAGGGGGCGGAAACTCG...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTCCATCTTGGCTCGAGTaGTCCTTTCAGCTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAPSWLE*SFQLLV
Trigger: AACTAGAAGCTGAAAGGACCACTCGAGCCAAGATGG...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTAGCTGTCACCATGCTTaGGTCTGTACACTGACCTTA +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFSCHHA*VCTLTL
Trigger: TAAGGTCAGTGTACAGACCCAAGCATGGTGACAGCT...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACCTTTGTAGGCGGCCATaGCTTCTTTCTGATACACGG +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHLCRRP*LLSDTR
Trigger: CCGTGTATCAGAAAGAAGTCATGGCCGCCTACAAAG...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACATTCGCTTGCATGATTTaGTCTTCTAACGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTFACMI*SSNAPC
Trigger: GCAGGGGGCGTTAGAAGATCAAATCATGCAAGCGAA...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTTGTCAAGAATGCCAATaGAGAACTGCCTTGACAGCT +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNACQECQ*RTALTA
Trigger: AGCTGTCAAGGCAGTTCTTCATTGGCATTCTTGACA...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTCCATTGGCTTCTCAATaGGATCTATGCAAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAPLASQ*DLCKLA
Trigger: TGCAAGCTTGCATAGATCTCATTGAGAAGCCAATGG...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCATGCAACCGTTTGGAATaGAGCTCCTTTCTTTCGTTT +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAACNRLE*SSFLSF
Trigger: AAACGAAAGAAAGGAGCTTCATTCCAAACGGTTGCA...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAGAATCTTCTGGAATTTaGTTCGCATCAGTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAAESSGI*FASVCP
Trigger: AGGGCAAACTGATGCGAATCAAATTCCAGAAGATTC...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACCTTCAATCTGCCGAGTaGAGTTGCTCTTTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHLQSAE*SCSFPW
Trigger: CCAGGGAAAAGAGCAACTTCACTCGGCAGATTGAAG...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTGCATTTGAAGGTCCTTaGTTTGAATCTGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFAFEGP*FESEAG
Trigger: GCCAGCTTCAGATTCAAATCAAGGACCTTCAAATGC...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACAGATAGGTCAGCTCTTTaGTGCATCGCTCAAGTCTGC +
Preference number: 4 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTDRSAL*CIAQVC
Trigger: GCAGACTTGAGCGATGCATCAAAGAGCTGACCTATC...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTTTGAGTTTATTGACTTaGGATTCTGCCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNALSLLT*DSATSA
Trigger: GGCAGAGGTGGCAGAATCTCAAGTCAATAAACTCAA...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTCATATTACCTGTCACTaGATGTCTCGTGTGGGGTTA +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFHITCH*MSRVGL
Trigger: TAACCCCACACGAGACATTCAGTGACAGGTAATATG...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCATTTTGTCCTCCTTTATaGTCAGACTCTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAAFCPPL*SDSLHL
Trigger: CAGATGGAGAGAGTCTGAGCATAAAGGAGGACAAAA...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCATCTCTCATCTCTTATTaGTTCCAGTTGGCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAASLISY*FQLAQK
Trigger: TTTCTGGGCCAACTGGAAGCAATAAGAGATGAGAGA...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTAAGTTCTTGACCTTGTaGTCTGTAGTACGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAKFLTL*SVVRFS
Trigger: GGAGAAGCGTACTACAGAGCACAAGGTCAAGAACTT...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTCTGCACAACCTTGGCTaGTCTGTTAAGTTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFLHNLG*SVKFAD
Trigger: ATCAGCAAACTTAACAGAGCAGCCAAGGTTGTGCAG...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGTTAGCTCTTGTCATCTaGTCAACACGGGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMLALVI*STRVRR
Trigger: CCTCCTGACCCGTGTTGAGCAGATGACAAGAGCTAA...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTAGATTCTGCCACCTCTaGCCTTTCCTTCACTTCATT +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNARFCHL*PFLHFI
Trigger: AATGAAGTGAAGGAAAGGGCAGAGGTGGCAGAATCT...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGAACCATTCACCAACATaGCCTAGTCCCCATGAAGCG +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMNHSPT*PSPHEA
Trigger: CGCTTCATGGGGACTAGGGCATGTTGGTGAATGGTT...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAACCTGGCCAGTACTTTaGAAAGCTGAAGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLTWPVL*KAEGGG
Trigger: GCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGT...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCATCCTGGATTCAATCATaGCTGCTATGGTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAASWIQS*LLWWQN
Trigger: ATTTTGCCACCATAGCAGCCATGATTGAATCCAGGA...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAATACTGCAGTCGGTTTaGAAAACCTTCACGGCATAT +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAAILQSV*KTFTAY
Trigger: ATATGCCGTGAAGGTTTTCCAAACCGACTGCAGTAT...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTCCCTGTGCTCTGGCTTaGAACAATGTGAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAPCALA*NNVKTL
Trigger: TAAAGTCTTCACATTGTTCCAAGCCAGAGCACAGGG...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGTCTCAAAGTGCAGAGTaGCCTCTTCCATGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMSQSAE*PLPCLG
Trigger: ACCGAGACATGGAAGAGGCCACTCTGCACTTTGAGA...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTTCTTCCAGTGTCACCTaGACTTCTGTCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNASSSVT*TSVFSS
Trigger: AGAAGAGAAGACAGAAGTCCAGGTGACACTGGAAGA...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACGCCATGACTTCTTTCTaGTACACGGGAAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHAMTSF*YTGSHL
Trigger: CAAATGGCTTCCCGTGTATCAGAAAGAAGTCATGGC...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGTTGGGCTTCTGGAGATaGACCGACTTTCCAAAATGG +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMLGFWR*TDFPKW
Trigger: CCATTTTGGAAAGTCGGTTCATCTCCAGAAGCCCAA...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGGCACCATTTCAGCATTaGCTTTGGATAAGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMAPFQH*LWIRSG
Trigger: ACCGGACCTTATCCAAAGTCAATGCTGAAATGGTGC...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGTTCTCTTCTGCATTTTaGCACTCCTGCACCACCTCT +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMFSSAF*HSCTTS
Trigger: AGAGGTGGTGCAGGAGTGTCAAAATGCAGAAGAGAA...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTCAGACTCTCTCCATCTaGTGTCTCAACAATTACTGT +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFQTLSI*CLNNYC
Trigger: ACAGTAATTGTTGAGACAGCAGATGGAGAGAGTCTG...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATTCTGGAGGATTCATCTaGTGGATTTTGTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYSGGFI*WILSSF
Trigger: AAAGGAGGACAAAATCCAGCAGATGAATCCTCCAGA...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTACCATCTGCTTCCAGTTaGTCTTCTCTAGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLPSASS*SSLGFC
Trigger: ACAGAAACCTAGAGAAGAGCAACTGGAAGCAGATGG...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGATGCCAATGAAGAACTaGCTTGACAGCTTGGCATCC +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMMPMKN*LDSLAS
Trigger: GGATGCCAAGCTGTCAAGGCAGTTCTTCATTGGCAT...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGCTGCTCTTCAACATTTaGCAGTGTCTCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMLLFNI*QCLLLS
Trigger: GCTGAGCAAGAGACACTGGCAAATGTTGAAGAGCAG...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAGGAAATGAAGAATCTTaGTTTCATTACGTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAAGNEES*FHYVPG
Trigger: CCCTGGAACGTAATGAAAGCAAGATTCTTCATTTCC...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGCCATGGCTTGTTCTGTaGCCAGCAATTCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMPWLVL*PAILQH
Trigger: ATGCTGAAGAATTGCTGGCCACAGAACAAGCCATGG...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTGGAAAGGATGCCCATTaGCTTCTCAATGAGATCTAT +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAGKDAH*LLNEIY
Trigger: ATAGATCTCATTGAGAAGCCAATGGGCATCCTTTCC...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTATTCCAAATCGGTACTaGGTATGGTCTATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAIPNRY*VWSISK
Trigger: CTTGGAGATAGACCATACCCAGTACCGATTTGGAAT...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCGCTTCTGGTCCAGCCTaGCTGCTGCAGAGCGGACCT +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTASGPA*LLQSGP
Trigger: AGGTCCGCTCTGCAGCAGCCAGGCTGGACCAGAAGC...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGTTGGCACAGCTAAGCTaGAGTTCCATCTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMLAQLS*SSISLR
Trigger: CCTCAATGAGATGGAACTCCAGCTTAGCTGTGCCAA...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACTCCAGTTTCTTCTTCTaGCTGAGGAGGCTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHSSFFF*LRRLVF
Trigger: GAACACAAGCCTCCTCAGCCAGAAGAAGAAACTGGA...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAAGTTTGCTGCCTCAATaGCTGCCTTCTTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLSLLPQ*LPSWPS
Trigger: AGAAGGCCAAGAAGGCAGCCATTGAGGCAGCAAACT...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCGAGGCTGGCAGGAGCTaGAAGAGCTCTGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTEAGRS*KSSGSR
Trigger: CCTGGACCCAGAGCTCTTCCAGCTCCTGCCAGCCTC...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATCACACAGAAGAGACCTaGATATGTATAGATCATCCA +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYHTEET*ICIDHP
Trigger: TGGATGATCTATACATATTCAGGTCTCTTCTGTGTG...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACACGCTTCTCCTTCTCTaGCTTCACCAACATTGTTTC +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHTLLLL*LHQHCF
Trigger: GAAACAATGTTGGTGAAGTCAGAGAAGGAGAAGCGT...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACTACTTGGAAAGGTATTaGTTGGCTTGTGTTTCCGCC +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHYLERY*LACVSA
Trigger: GGCGGAAACACAAGCCAATCAATACCTTTCCAAGTA...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATTCAAGCTCATCAACTTaGTGTTCCAGCTTCAGATTT +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYSSSST*CSSFRF
Trigger: AAATCTGAAGCTGGAACAGCAAGTTGATGAGCTTGA...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATTTTGCAGTTGCTTCATaGAAGCGCTCTTCATATAGA +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYFAVAS*KRSSYR
Trigger: TCTATATGAAGAGCGCTTGCATGAAGCAACTGCAAA...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCATACTTCATTCTCCATTaGACCATTTCAGCATTGACT +
Preference number: 4 (lower is better)
Translates to: AMLCVISGKADAGCHGAAYFILH*TISALT
Trigger: AGTCAATGCTGAAATGGTGCAATGGAGAATGAAGTA...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTGAGTCAATGGTACACTaGTGCTTCCTCCTAAAATTT +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFESMVH*CFLLKF
Trigger: AAATTTTAGGAGGAAGCAGCAGTGTACCATTGACTC...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAACTTCTTCTGACAGCCTaGGGCCACGCTCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQLLLTA*GHALSA
Trigger: AGCAGACAGAGCGTGGCCGCAGGCTGTCAGAAGAAG...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTATTGATTCTTTCTGTTaGTTCCAGGAGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAIDSFC*FQELFF
Trigger: GAAGAAGAGCTCCTGGAAGCAACAGAAAGAATCAAT...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTACTTGGCCTTCTCTTCTaGATTTTGACACTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLLGLLF*ILTLLH
Trigger: GTGCAGGAGTGTCAAAATGCAGAAGAGAAGGCCAAG...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAAATCGGTACTGGGTATaGTCTATCTCCAAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLNRYWV*SISKEP
Trigger: TGGCTCCTTGGAGATAGACCATACCCAGTACCGATT...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGCTTATTGCTTCCAGTTaGCCCAGAAACCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMLIASS*PRNPAL
Trigger: TAAAGCTGGGTTTCTGGGCCAACTGGAAGCAATAAG...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCGACTGCAGCTGCTTCTaGTCCAGCCTGGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTDCSCF*SSLAAA
Trigger: TGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTC...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATTTAGAAATCTCTTCTTaGAGGTTCTTGTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYLEISS*RFLFSL
Trigger: GAGGGAGAACAAGAACCTCCAAGAAGAGATTTCTAA...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACCCCATGAAGCGTGACTaGTCTAAGGACATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHPMKRD*SKDIFY
Trigger: ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGG...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTAATGCATCTCACAAAATaGGGTGCTGTTGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLMHLTK*GAVDFR
Trigger: TCTGAAATCAACAGCACCTCATTTTGTGAGATGCAT...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACAAGGTCATTTGCCAACTaGGTCACCTTATCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTRSFAN*VTLSSF
Trigger: AAAGCTAGATAAGGTGACTCAGTTGGCAAATGACCT...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTCTTCTGTTCTCTGGATaGCATTGTTTTCATACTTCA +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNALLFSG*HCFHTS
Trigger: TGAAGTATGAAAACAATGTCATCCAGAGAACAGAAG...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTTTTATATCACAATGCTaGGGAGATCTTATGACTTCC +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFFISQC*GDLMTS
Trigger: GGAAGTCATAAGATCTCCTCAGCATTGTGATATAAA...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTTTAAAATCAGCATACTaGAGTCGGTTTGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFLKSAY*SRFGKP
Trigger: AGGTTTTCCAAACCGACTGCAGTATGCTGATTTTAA...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGTCTAGTTTCTGGATTTaGTTTCTACTCCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMSSFWI*FLLPIR
Trigger: CCTGATGGGGAGTAGAAAGCAAATCCAGAAACTAGA...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACCACAAACTTGCTCTTTaGAAAGGTCCTTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHHKLAL*KGPWIQ
Trigger: CTGAATCCAAGGACCTTTCCAAAGAGCAAGTTTGTG...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACATTTTCCCTGGAAAGTTaGTTTATCAGAGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTFSLES*FIRASF
Trigger: GAAGGAGGCTCTGATAAACCAACTTTCCAGGGAAAA...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTATGGAAAGGTATTGATTaGCTTGTGTTTCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLWKGID*LVFPPP
Trigger: AGGTGGCGGAAACACAAGCCAATCAATACCTTTCCA...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAACCAGGGAGCTGTCTCTaGTCTCTTCTAGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQPGSCL*SLLAPL
Trigger: AAGGGGAGCTAGAAGAGACCAGAGACAGCTCCCTGG...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAAATCAATGTCCACAGATaGCAGCATGCCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQINVHR*QHASGT
Trigger: GGTGCCAGAGGCATGCTGTCATCTGTGGACATTGAT...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACACCTGTTCTATAGTTTaGCCTCTGGTAACATATTCG +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHTCSIV*PLVTYS
Trigger: CGAATATGTTACCAGAGGTCAAACTATAGAACAGGT...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACTTTCCAGTTTCTGCTTaGCCTGCTGTAGATTTTCTA +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHFPVSA*PAVDFL
Trigger: TAGAAAATCTACAGCAGGTCAAGCAGAAACTGGAAA...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTAATGCAAATTTCTTTATaGCCTACTCCAATCCAGAAC +
Preference number: 4 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLMQISL*PTPIQN
Trigger: GTTCTGGATTGGAGTAGGTCATAAAGAAATTTGCAT...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAAGATCTCAGGAAAAGCTaGTGCTGGTTGCCATGGAGC +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQDLRKS*CWLPWS
Trigger: GCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATC...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAAGGTATGCAGCACGGATaGCTCATTGAGGTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQGMQHG*LIEVSQ
Trigger: CTGACTCACCTCAATGAGGCATCCGTGCTGCATACC...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAATTCCTCTCTCCAGCCTaGTGGAAAATCACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQFLSPA*WKITLD
Trigger: GTCCAGGGTGATTTTCCAGCAGGCTGGAGAGAGGAA...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTTCCAGAACAAACATGTaGCAATTGAAGAATTGTTGT +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNASRTNM*QLKNCC
Trigger: ACAACAATTCTTCAATTGGCACATGTTTGTTCTGGA...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTTTGGATCAAAATAAGTaGATCCCTTTCTTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNALDQNK*IPFFQN
Trigger: ATTCTGGAAGAAAGGGATGCACTTATTTTGATCCAA...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCCTCGCTTTTCTCTCCTaGTCAAGGGCACCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTLAFLS*SRAPSS
Trigger: GCTTGAGGGTGCCCTTGAGCAGGAGAGAAAAGCGAG...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCCCAGGTGTCGCTGGCTaGTTTCCAGGTTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTPGVAG*FPGSPY
Trigger: GTATGGAGAACCTGGAAAGCAGCCAGCGACACCTGG...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAGAGTTTCTCAGCATTTaGCTTAGCTCTTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLEFLSI*LSSCHL
Trigger: CAGATGACAAGAGCTAAGGCAAATGCTGAGAAACTC...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAATCTCCTGGCCCACGATaGTCTCCTCATAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQSPGPR*SPHRCS
Trigger: AGAACACCTATGAGGAGAGCATCGTGGGCCAGGAGA...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTACTTTCTTTCAAGTTCTaGTTTAGCTTCCAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLLSFKF*FSFQEF
Trigger: GAACTCTTGGAAGCTAAAGCAGAACTTGAAAGAAAG...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGTCTGAGTTTGCATCCTaGTCAGATTCTTCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMSEFAS*SDSSCL
Trigger: AAGACAAGAAGAATCTGAGCAGGATGCAAACTCAGA...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTGAATCAAGCCAAAGTTaGCTAACTTTAGTAAAAACC +
Preference number: 4 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAESSQS*LTLVKT
Trigger: GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTC...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAGGAGGATTCATCTGCTaGATTTTGTCCTCCTTTATG +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLGGFIC*ILSSFM
Trigger: CATAAAGGAGGACAAAATCCAGCAGATGAATCCTCC...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACGCTGGAAAATCACCCTaGACTTTTCAAGCAAATAGA +
Preference number: 4 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHAGKSP*TFQANR
Trigger: TCTATTTGCTTGAAAAGTCCAGGGTGATTTTCCAGC...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGACCGACTTTCCAAAATaGTTGTCAAAGAGTTTGGTC +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMTDFPK*LSKSLV
Trigger: GACCAAACTCTTTGACAACCATTTTGGAAAGTCGGT...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACATTTCTTCTCCCCAAATaGTATAGCACTGTCAGTACT +
Preference number: 4 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTFLLPK*YSTVST
Trigger: AGTACTGACAGTGCTATACCATTTGGGGAGAAGAAA...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAATGTAGATTTTCTACCTaGCCCTCGAGCTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQCRFST*PSSSAR
Trigger: CCTGGCTGAGCTCGAGGGCCAGGTAGAAAATCTACA...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCTGGGCCAGGGCACTCTaGGATTTGGTCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTWARAL*DLVSFS
Trigger: GGAAAAGGAGACCAAATCCCAGAGTGCCCTGGCCCA...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTACCAGTTCACGAACCCTaGATTCTAGTTTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLPVHEP*ILVSGF
Trigger: AAATCCAGAAACTAGAATCCAGGGTTCGTGAACTGG...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAAGATGCCTCATTGAGGTaGGTCAGCATTGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQDASLR*VSIAMS
Trigger: AGACATGGCAATGCTGACTCACCTCAATGAGGCATC...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAAGTTCTTCACAGCCATaGAAGCTCTTATGTTCCATT +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLSSSQP*KLLCSI
Trigger: AATGGAACATAAGAGCTTTCATGGCTGTGAAGAACT...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACATCTTTTTCCAGTTTCTaGTTGACCTGCTGTAGATTT +
Preference number: 4 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTSFSSF*LTCCRF
Trigger: AAATCTACAGCAGGTCAAGCAGAAACTGGAAAAAGA...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCCGCTCTGTCTGCTCTTaGAGGGACCTTAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTRSVCS*RDLRSS
Trigger: AGAGGATCTAAGGTCCCTGCAAGAGCAGACAGAGCG...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAAAAAGCTGATGCTGGTTaGCATGGAGCTGCACACACA +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQKADAG*HGAAHT
Trigger: TGTGTGTGCAGCTCCATGGCAACCAGCATCAGCTTT...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGTCTTCCAGAATCTTCTaGAATTTGATTCGCATCAGT +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMSSRIF*NLIRIS
Trigger: ACTGATGCGAATCAAATTCCAGAAGATTCTGGAAGA...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTACCATTCTACCACTGCTaGCTCACAATATACATTCAT +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLPFYHC*LTIYIH
Trigger: ATGAATGTATATTGTGAGCCAGCAGTGGTAGAATGG...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCCATCCTTTCATACATTaGCTTGGACAGGGCACCGAC +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTHPFIH*LGQGTD
Trigger: GTCGGTGCCCTGTCCAAGTCAATGTATGAAAGGATG...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAATAAGGTACCACTCCTaGATAATGGACAAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLIRYHS*IMDKFK
Trigger: TTTGAACTTGTCCATTATGCAGGAGTGGTACCTTAT...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAATGCTGCCAGGTCATTTaGCAACTGAGTCACCTTATC +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQCCQVI*QLSHLI
Trigger: GATAAGGTGACTCAGTTGGCAAATGACCTGGCAGCA...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCTCTTCAGCTTCTTTCTaGATCCGGGCAACATCAGCC +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTSSASF*IRATSA
Trigger: GGCTGATGTTGCCCGGATGCAGAAAGAAGCTGAAGA...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGATGGTGGCAAAATACTaGATAATATGTTTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMMVAKY*IICLLF
Trigger: GAACAGCAAACATATTATCCAGTATTTTGCCACCAT...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAATTGCCAGTTCCTTCTTaGCATCCTCCAAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQLPVPS*HPPSLL
Trigger: CAGAAGACTTGGAGGATGCCAAGAAGGAACTGGCAA...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAATTAGTTATTTCCAGCTaGGCCAAACTGGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQLVISS*AKLDPP
Trigger: AGGAGGATCCAGTTTGGCTCAGCTGGAAATAACTAA...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAACAGCTGCTTTTCTGCTaGTCACAAACTTGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQQLLFC*SQTCSL
Trigger: CAAAGAGCAAGTTTGTGAGCAGCAGAAAAGCAGCTG...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAATTTCCAGCCAACCACTaGTATTATAAGGTACCACTC +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQFPANH*YYKVPL
Trigger: GAGTGGTACCTTATAATATCAGTGGTTGGCTGGAAA...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCTGCTGCTCACAAACTTaGTCTTTGGAAAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTCCSQT*SLERSL
Trigger: CAAGGACCTTTCCAAAGAGCAAGTTTGTGAGCAGCA...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTTTCTGTGCCATCTaGTTCCAGTTGCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTIFCAI*FQLLFS
Trigger: AGAGAAGAGCAACTGGAAGCAGATGGCACAGAAAAT...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCAGATCTATGCAAGCTTaGAAATCCAGACCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTRSMQA*KSRPKP
Trigger: TGGCTTTGGTCTGGATTTGCAAGCTTGCATAGATCT...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCTGGGCAATGGTGTCTTaGTTCTTCTTCAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTWAMVS*FFFSSS
Trigger: AGAAGAACTGAAGAAGAAGCAAGACACCATTGCCCA...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCAGGGTCCAGTATACCTaGTATTTTGTTCACATTGGG +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTRVQYT*YFVHIG
Trigger: CCCAATGTGAACAAAATACCAGGTATACTGGACCCT...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCTTTCCAAGTGGGCAATaGTGTCTTGCTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTFPSGQ*CLASSS
Trigger: TGAAGAAGAAGCAAGACACCATTGCCCACTTGGAAA...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCTTCATATTTCCAAAGTaGATGATGGCTCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTFIFPK*MMAPVS
Trigger: ACTCACTGGAGCCATCATGCACTTTGGAAATATGAA...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAAACTTTGATTCTAGGATaGATCAAGCACTTTACCAAC +
Preference number: 4 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQTLILG*IKHFTN
Trigger: GTTGGTAAAGTGCTTGATCCATCCTAGAATCAAAGT...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCGTCCCTTCTCTAACCTaGTTTGTCAGATTAGAAATC +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTVPSLT*FVRLEI
Trigger: GATTTCTAATCTGACAAACCAGGTTAGAGAAGGGAC...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR TCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCCTTGGGTCTGTACACTaGCCTTATGAGTATAAAATA +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTLGSVH*PYEYKI
Trigger: TATTTTATACTCATAAGGTCAGTGTACAGACCCAAG...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCGCTCTTATGTTCCATTaGATCAAAATAAGTGCATCC +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTALMFH*IKISAS
Trigger: GGATGCACTTATTTTGATCCAATGGAACATAAGAGC...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR GCA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCAAGTCTGTAATTGTCTaGTCCATATTTTCTCTTGTC +
Preference number: 4 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTKSVIV*SIFSLV
Trigger: GACAAGAGAAAATATGGAGCAGACAATTACAGACTT...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 90 bp GGCAAGGGCCTTGCCAGACTGCAGCTGCTTCTGGTCCAGCCTGGCTaGTGCAGAGCGGACCTTCCCGAGGTCAGACAGGGCGTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: GKGLARLQLLLVQPG*CRADLPEVRQGVPE
Trigger: CTCGGGGACGCCCTGTCTGACCTCGGGAAGGTCCGCTCTGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGCAAGGCCCTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 90 bp AAGGGCCTTGCCAGACTGCAGCTGCTTCTGGTCCAGCCTGGCTGCTaGAGAGCGGACCTTCCCGAGGTCAGACAGGGCGTCCCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: KGLARLQLLLVQPGC*RADLPEVRQGVPEL
Trigger: GAGCTCGGGGACGCCCTGTCTGACCTCGGGAAGGTCCGCTCTGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGCAAGGCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CCA 90 bp AGTCGGCAAGGGCCTTGCCAGACTGCAGCTGCTTCTGGTCCAGCCTaGCTGCTGCAGAGCGGACCTTCCCGAGGTCAGACAGGGCGTCCC +
Preference number: 5 (lower is better)
Translates to: SRQGPCQTAAASGPA*LLQSGPSRGQTGRP
Trigger: GGGACGCCCTGTCTGACCTCGGGAAGGTCCGCTCTGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGCAAGGCCCTTGCCGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 90 bp TCGTGCTTCTGCTTCCAGTCGGCAAGGGCCTTGCCAGACTGCAGCTaGTTCTGGTCCAGCCTGGCTGCTGCAGAGCGGACCTTCCCGAGG +
Preference number: 5 (lower is better)
Translates to: SCFCFQSARALPDCS*FWSSLAAAERTFPR
Trigger: CCTCGGGAAGGTCCGCTCTGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGCAAGGCCCTTGCCGACTGGAAGCAGAAGCACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CCA 90 bp TTCTGCTTCCAGTCGGCAAGGGCCTTGCCAGACTGCAGCTGCTTCTaGTCCAGCCTGGCTGCTGCAGAGCGGACCTTCCCGAGGTCAGAC +
Preference number: 5 (lower is better)
Translates to: FCFQSARALPDCSCF*SSLAAAERTFPRSD
Trigger: GTCTGACCTCGGGAAGGTCCGCTCTGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGCAAGGCCCTTGCCGACTGGAAGCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS-3UTR CAA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCGAGGCATTTCTGGCATaGGCCACCCCCATGGCTTCG +
Preference number: 5 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSEAFLA*ATPMAS
Trigger: CGAAGCCATGGGGGTGGCCAATGCCAGAAATGCCTC...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 90 bp CTCTTTGATGCATCGCTCAAGTCTGCGGGCTCCCCTCTGGGCCTCTaGACTGCGACGGATTTCACCCTCCAGTTCACCTTCCAGTTCACG +
Preference number: 5 (lower is better)
Translates to: LFDASLKSAGSPLGL*TATDFTLQFTFQFT
Trigger: CGTGAACTGGAAGGTGAACTGGAGGGTGAAATCCGTCGCAGTGCAGAGGCCCAGAGGGGAGCCCGCAGACTTGAGCGATGCATCAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCCGGTGCAGCTCAGCCTaGACCTCTTGTTCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSRCSSA*TSCSSS
Trigger: TGAGGAAGAACAAGAGGTCAAGGCTGAGCTGCACCG...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS TCA 90 bp CTCCTACCTCCTCCAGCCTCTCATTCAAGTCAGCCAGGTCTTGGGTaGGGTCAGCTCTCTCCCTTTCCATCTTGGCTCGAGTGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: LLPPPASHSSQPGLG*GQLSPFPSWLEWSF
Trigger: AAAGGACCACTCGAGCCAAGATGGAAAGGGAGAGAGCTGACCTCACCCAAGACCTGGCTGACTTGAATGAGAGGCTGGAGGAGGTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 90 bp CTCCAAGGAGGCATTTCTGGCATTGGCCACCCCCATGGCTTCGGCTaGCTCCTGCAATCTAATTGCCAGTTCCTTCTTGGCATCCTCCAA +
Preference number: 5 (lower is better)
Translates to: LQGGISGIGHPHGFG*LLQSNCQFLLGILQ
Trigger: TTGGAGGATGCCAAGAAGGAACTGGCAATTAGATTGCAGGAGGCAGCCGAAGCCATGGGGGTGGCCAATGCCAGAAATGCCTCCTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS-3UTR CAA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTGCATCCAGGGCCCTGTaGATCCGTGCCACTAGCCAC +
Preference number: 5 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAASRAL*IRATSH
Trigger: GTGGCTAGTGGCACGGATCAACAGGGCCCTGGATGC...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 90 bp GAGGCATTTCTGGCATTGGCCACCCCCATGGCTTCGGCTGCCTCCTaGAATCTAATTGCCAGTTCCTTCTTGGCATCCTCCAAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: EAFLALATPMASAAS*NLIASSFLASSKSS
Trigger: AGAAGACTTGGAGGATGCCAAGAAGGAACTGGCAATTAGATTGCAGGAGGCAGCCGAAGCCATGGGGGTGGCCAATGCCAGAAATGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS-3UTR CAA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCGTGGGCAATGGTGTCTaGCTTCTTCTTCAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSVGNGV*LLLQFF
Trigger: GAAGAACTGAAGAAGAAGCAAGACACCATTGCCCAC...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATAACTGCCTTGACAGCTaGGCATCCAGGGCCCTGTTG +
Preference number: 5 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYNCLDS*ASRALL
Trigger: CAACAGGGCCCTGGATGCCAAGCTGTCAAGGCAGTT...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCCTCAAGCTCATCAACTaGCTGTTCCAGCTTCAGATT +
Preference number: 5 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSLKLIN*LFQLQI
Trigger: AATCTGAAGCTGGAACAGCAAGTTGATGAGCTTGAG...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS TCA 90 bp CCAAGGCTGTGGCCTGTAGTAGAAGCAGCTCAGCTTCACTTCTTCTaGGGAAGGCTGCGGCTTCTCCAAGGTCTGACAGATCCATCTTTA +
Preference number: 5 (lower is better)
Translates to: PRLWPVVEAAQLHFF*GRLRLLQGLTDPSL
Trigger: TAAAGATGGATCTGTCAGACCTTGGAGAAGCCGCAGCCTTCCTCAGAAGAAGTGAAGCTGAGCTGCTTCTACTACAGGCCACAGCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS TCA 90 bp TGTGAGGGGGAGCCTCTGATCGCCTCTTCCCTTTGTAGGCGGCCATaGCTTCTTTCTGATACACGGGAAGCCATTTGTAAGGGTTTATGG +
Preference number: 5 (lower is better)
Translates to: CEGEPLIASSLCRRP*LLSDTREAICKGLW
Trigger: CCATAAACCCTTACAAATGGCTTCCCGTGTATCAGAAAGAAGTCATGGCCGCCTACAAAGGGAAGAGGCGATCAGAGGCTCCCCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAGCCTCCAGCTGGATCTaGGATTTAATCAGCCACTCG +
Preference number: 5 (lower is better)
Translates to: AMLCVISGKADAGCHGAAASSWI*DLISHS
Trigger: CGAGTGGCTGATTAAATCCAAGATCCAGCTGGAGGC...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCCTGACTTCACCAACATaGTTTCCAGGTCATCGATTT +
Preference number: 5 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSLTSPT*FPGHRF
Trigger: AAATCGATGACCTGGAAACAATGTTGGTGAAGTCAG...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTATCTGACACCTGCCGGTaGGCACAGCTAAGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLSDTCR*AQLSWS
Trigger: ACTCCAGCTTAGCTGTGCCAACCGGCAGGTGTCAGA...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GCACACACACCTGGCCAGTACTTTGCAAAGCTGAAGGAGGAGGCTGGCAGGAGCGTCATCCAGCTGCATTaGAAGGTCCTTGATTTGAAT +
Preference number: 5 (lower is better)
Translates to: AHTPGQYFAKLKEEAGRSVIQLH*KVLDLN
Trigger: ATTCAAATCAAGGACCTTCAAATGCAGCTGGATGAC...GCTCCTGCCAGCCTCCTCCTTCAGCTTTGCAAAGTACTGGCCAGGTGTGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS TCA 90 bp CTGAAAGGCGTTATTGGCAACAGCAAAGATGTGAGGGGGAGCCTCTaGTCGCCTCTTCCCTTTGTAGGCGGCCATGACTTCTTTCTGATA +
Preference number: 5 (lower is better)
Translates to: LKGVIGNSKDVRGSL*SPLPFVGGHDFFLI
Trigger: TATCAGAAAGAAGTCATGGCCGCCTACAAAGGGAAGAGGCGATCAGAGGCTCCCCCTCACATCTTTGCTGTTGCCAATAACGCCTTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACAAGTCAGCCAGGTCTaGGGTGAGGTCAGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTQVSQV*GEVSSL
Trigger: GAGAGAGCTGACCTCACCCAAGACCTGGCTGACTTG...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCACTCAGCCTTGACCTCTaGTTCTTCCTCATACTGCTC +
Preference number: 5 (lower is better)
Translates to: AMLCVISGKADAGCHGAALSLDL*FFLILL
Trigger: GAGCAGTATGAGGAAGAACAAGAGGTCAAGGCTGAG...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAGGCCCAGGGATTTGGTaGCTTCTGACACCTGCCGGT +
Preference number: 5 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLGPGIW*LLTPAG
Trigger: ACCGGCAGGTGTCAGAAGCAACCAAATCCCTGGGCC...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS TCA 90 bp TGGTCTCCTTTTCCAGCTGCCCTCTCAGGTCTTCAATCTGCCGAGTaGAGTTGCTCTTTTCCCTGGAAAGTTGGTTTATCAGAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: WSPFPAALSGLQSAE*SCSFPWKVGLSEPP
Trigger: AGGAGGCTCTGATAAACCAACTTTCCAGGGAAAAGAGCAACTTCACTCGGCAGATTGAAGACCTGAGAGGGCAGCTGGAAAAGGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS-3UTR CAA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATCTTTCATACATTGACTaGGACAGGGCACCGACAGCA +
Preference number: 5 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYLSYID*DRAPTA
Trigger: TGCTGTCGGTGCCCTGTCCAAGTCAATGTATGAAAG...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAACATCCTTTCATACATaGACTTGGACAGGGCACCGA +
Preference number: 5 (lower is better)
Translates to: AMLCVISGKADAGCHGAATSFHT*TWTGHR
Trigger: TCGGTGCCCTGTCCAAGTCAATGTATGAAAGGATGT...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAGAGATCTATGCAAGCTaGCAAATCCAGACCAAAGCC +
Preference number: 5 (lower is better)
Translates to: AMLCVISGKADAGCHGAAEIYAS*QIQTKA
Trigger: GGCTTTGGTCTGGATTTGCAAGCTTGCATAGATCTC...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCACATACTGCAGTCGGTTaGGAAAACCTTCACGGCATA +
Preference number: 5 (lower is better)
Translates to: AMLCVISGKADAGCHGAAHTAVG*ENLHGI
Trigger: TATGCCGTGAAGGTTTTCCAAACCGACTGCAGTATG...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTATTTGCCAGTGTCTCTaGCTCAGCCTGAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAICQCL*LSLKLK
Trigger: CTTCAGCTTCAGGCTGAGCAAGAGACACTGGCAAAT...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTACTCTCCCTTTCCATCTaGGCTCGAGTGGTCCTTTCA +
Preference number: 5 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLLSLSI*ARVVLS
Trigger: TGAAAGGACCACTCGAGCCAAGATGGAAAGGGAGAG...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATCCACAGCTTTGTCTTTaGTGCTGCCAGGTCATTTGC +
Preference number: 5 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYPQLCL*CCQVIC
Trigger: GCAAATGACCTGGCAGCACAAAAGACAAAGCTGTGG...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACAGGGCACTCTGGGATTaGGTCTCCTTTTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHRALWD*VSFSSC
Trigger: GCAGCTGGAAAAGGAGACCAAATCCCAGAGTGCCCT...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GCAATGCTGTGTGTGATCTCAGGAAAAGCTGATGCTGGTTGCCATGGAGCTGCAATTTCAGCATTGACTTaGGATAAGGTCCGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: AMLCVISGKADAGCHGAAISALT*DKVRCS
Trigger: GCTGCACCGGACCTTATCCAAAGTCAATGCTGAAAT...TGCAGCTCCATGGCAACCAGCATCAGCTTTTCCTGAGATCACACACAGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTCTTCTCTTCTGCATTTaGACACTCCTGCACCACCTC +
Preference number: 5 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNALLFCI*TLLHHL
Trigger: GAGGTGGTGCAGGAGTGTCAAAATGCAGAAGAGAAG...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTAAGGTATTGATTGGCTaGTGTTTCCGCCACCTCGAC +
Preference number: 5 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAKVLIG*CFRHLD
Trigger: GTCGAGGTGGCGGAAACACAAGCCAATCAATACCTT...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CCA 90 bp AGGTCTTCAATCTGCCGAGTGAAGTTGCTCTTTTCCCTGGAAAGTTaGTTTATCAGAGCCTCCTTCTCTTCAAGCCTCCGTAGGAACTCG +
Preference number: 5 (lower is better)
Translates to: RSSICRVKLLFSLES*FIRASFSSSLRRNS
Trigger: CGAGTTCCTACGGAGGCTTGAAGAGAAGGAGGCTCTGATAAACCAACTTTCCAGGGAAAAGAGCAACTTCACTCGGCAGATTGAAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS-3UTR CAA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATTCTTATTGCTTCCAGTaGGCCCAGAAACCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYSYCFQ*AQKPSF
Trigger: AAAGCTGGGTTTCTGGGCCAACTGGAAGCAATAAGA...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACATTGATTCGCATCAGTTaGCCCTGTGCTCTGGCTTGG +
Preference number: 5 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTLIRIS*PCALAW
Trigger: CCAAGCCAGAGCACAGGGCAAACTGATGCGAATCAA...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTCTGAGTGAGGGATACTaGCTTTGCTTTCAGTTCCTC +
Preference number: 5 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNALSEGY*LCFQFL
Trigger: GAGGAACTGAAAGCAAAGCAAGTATCCCTCACTCAG...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACAGCCTCCTGCACAACCTaGGCTGCTCTGTTAAGTTTG +
Preference number: 5 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTASCTT*AALLSL
Trigger: CAAACTTAACAGAGCAGCCAAGGTTGTGCAGGAGGC...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTAAATTGCCCTCCAGTTaGTGCAGTTCCCTTTCACAG +
Preference number: 5 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNAKLPSS*CSSLSQ
Trigger: CTGTGAAAGGGAACTGCACAAACTGGAGGGCAATTT...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATATCTGCCGAGTGAAGTaGCTCTTTTCCCTGGAAAGT +
Preference number: 5 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYICRVK*LFSLES
Trigger: ACTTTCCAGGGAAAAGAGCAACTTCACTCGGCAGAT...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTTTGAAGGTCCTTGATTaGAATCTGAAGCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNALKVLD*NLKLAQ
Trigger: CTGGGCCAGCTTCAGATTCAAATCAAGGACCTTCAA...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTAGTTCTTCTGACAAGTTaGCTGCCTCAATGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLVLLTS*LPQWLP
Trigger: AGGCAGCCATTGAGGCAGCAAACTTGTCAGAAGAAC...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 90 bp TGGGATTTGGTCTCCTTTTCCAGCTGCCCTCTCAGGTCTTCAATCTaGCGAGTGAAGTTGCTCTTTTCCCTGGAAAGTTGGTTTATCAGA +
Preference number: 5 (lower is better)
Translates to: WDLVSFSSCPLRSSI*RVKLLFSLESWFIR
Trigger: TCTGATAAACCAACTTTCCAGGGAAAAGAGCAACTTCACTCGGCAGATTGAAGACCTGAGAGGGCAGCTGGAAAAGGAGACCAAATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS-3UTR CAA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTTGCATCCTGATGAATTaGCCAAAACGAGAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFCILMN*PKREEL
Trigger: CAACTCCTCTCGTTTTGGCAAATTCATCAGGATGCA...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACAAGATGTCCATGGCTaGTTCTGTGGCCAGCAATTC +
Preference number: 5 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTQDVHG*FCGQQF
Trigger: GAATTGCTGGCCACAGAACAAGCCATGGACATCTTG...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTTCAAAGAGTTTGGTCTaGAAAGTCAGGTCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNASKSLV*KVRSVA
Trigger: GGCTACAGACCTGACTTTCAAGACCAAACTCTTTGA...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTACTGCTGCTCACAAACTaGCTCTTTGGAAAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLLLLTN*LFGKVL
Trigger: AAGGACCTTTCCAAAGAGCAAGTTTGTGAGCAGCAG...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGGCCCTGTGCTCTGGCTaGGAACAATGTGAAGACTTT +
Preference number: 5 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMALCSG*EQCEDF
Trigger: AAAGTCTTCACATTGTTCCAAGCCAGAGCACAGGGC...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTTATCTAGCTTTGCAGTaGCTTCATGCAAGCGCTCTT +
Preference number: 5 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFYLALQ*LHASAL
Trigger: AAGAGCGCTTGCATGAAGCAACTGCAAAGCTAGATA...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGGTGCTGCCAGGTCATTaGCCAACTGAGTCACCTTAT +
Preference number: 5 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMVLPGH*PTESPY
Trigger: ATAAGGTGACTCAGTTGGCAAATGACCTGGCAGCAC...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTCTTTTCCCTGGAAAGTaGGTTTATCAGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFLFPGK*VYQSLL
Trigger: AAGGAGGCTCTGATAAACCAACTTTCCAGGGAAAAG...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTATGCACCATTTCAGCATaGACTTTGGATAAGGTCCGG +
Preference number: 5 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLCTISA*TLDKVR
Trigger: CCGGACCTTATCCAAAGTCAATGCTGAAATGGTGCA...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTAATTGCCAGTTCCTTCTaGGCATCCTCCAAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLIASSF*ASSKSS
Trigger: AGAAGACTTGGAGGATGCCAAGAAGGAACTGGCAAT...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAACAGTCGGCAAGGGCCTaGCCAGACTGCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQQSARA*PDCSCF
Trigger: GAAGCAGCTGCAGTCTGGCAAGGCCCTTGCCGACTG...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGGTACTTCTCCAGCTGTaGTCCTTTCAAAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMVLLQL*SFQSRG
Trigger: TCCCCTGCTTTGAAAGGACAACAGCTGGAGAAGTAC...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 90 bp GGCTGCTTTCCAGGTTCTCCATACTTTCCCGATTCAGCTTTAAATTaGCCTCCAGTTTGTGCAGTTCCCTTTCACAGTTCATTCTCGCTT +
Preference number: 5 (lower is better)
Translates to: GCFPGSPYFPDSALN*PPVCAVPFHSSFSL
Trigger: AAGCGAGAATGAACTGTGAAAGGGAACTGCACAAACTGGAGGGCAATTTAAAGCTGAATCGGGAAAGTATGGAGAACCTGGAAAGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 90 bp GCAGAAGTTGTCTCAAAGTGCAGAGTGGCCTCTTCCATGTCTCGGTaGAGCTTCTGGAATTTGGTTTCCTGTTTCTTAGTTATTTCCAGC +
Preference number: 5 (lower is better)
Translates to: AEVVSKCRVASSMSR*SFWNLVSCFLVISS
Trigger: GCTGGAAATAACTAAGAAACAGGAAACCAAATTCCAGAAGCTGCACCGAGACATGGAAGAGGCCACTCTGCACTTTGAGACAACTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS-3UTR CAA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTAATGAGGAAAGCAGCTTaGTCAGCATTTTCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLMRKAA*SAFSVP
Trigger: TGGCACAGAAAATGCTGACAAAGCTGCTTTCCTCAT...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTATTCCGCCACCTCGACTaGCTGCTTGTAATTTTGCAC +
Preference number: 5 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLFRHLD*LLVILH
Trigger: GTGCAAAATTACAAGCAGCAAGTCGAGGTGGCGGAA...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACAGAAACAGCACCTTCCTaGTACTTCTCCAGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTETAPS*YFSSCC
Trigger: ACAACAGCTGGAGAAGTACAAGGAAGGTGCTGTTTC...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GGGAGCTGTCTCTGGTCTCTTCTAGCTCCCCTTTTTGGCCTGGAGTCATATTTTATGCAACCTAAGTTTTaGGCCATGAAACAGCACCTT +
Preference number: 5 (lower is better)
Translates to: GSCLWSLLAPLFGLESYFMQPKF*AMKQHL
Trigger: AAGGTGCTGTTTCATGGCCAAAAACTTAGGTTGCAT...AAAATATGACTCCAGGCCAAAAAGGGGAGCTAGAAGAGACCAGAGACAGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAAAGCTGTCACCATGCTaGGGTCTGTACACTGACCTT +
Preference number: 5 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLKLSPC*GLYTDL
Trigger: AAGGTCAGTGTACAGACCCAAGCATGGTGACAGCTT...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 90 bp GGTCTATCTCCAAGGAGCCAAGTAATTCTTCAGCTGCTTTTCTGCTaGTCACAAACTTGCTCTTTGGAAAGGTCCTTGGATTCAGAATGC +
Preference number: 5 (lower is better)
Translates to: GLSPRSQVILQLLFC*SQTCSLERSLDSEC
Trigger: GCATTCTGAATCCAAGGACCTTTCCAAAGAGCAAGTTTGTGAGCAGCAGAAAAGCAGCTGAAGAATTACTTGGCTCCTTGGAGATAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 90 bp CGGGTAACCTCAATTCTGCTCTTAGCTTCAGAATCCAGACTAGACTaGAGGGAGTCAATGGTACACTGCTGCTTCCTCCTAAAATTTTCT +
Preference number: 5 (lower is better)
Translates to: RVTSILLLASESRLD*RESMVHCCFLLKFS
Trigger: AGAAAATTTTAGGAGGAAGCAGCAGTGTACCATTGACTCCCTGCAGTCTAGTCTGGATTCTGAAGCTAAGAGCAGAATTGAGGTTACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTACCAAAACGAGAGGAGTaGTCATTTCTCAGGGTTTTA +
Preference number: 5 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLPKREE*SFLRVL
Trigger: TAAAACCCTGAGAAATGACAACTCCTCTCGTTTTGG...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTGACTTTCCAAAATGGTaGTCAAAGAGTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNADFPKW*SKSLVL
Trigger: CAAGACCAAACTCTTTGACAACCATTTTGGAAAGTC...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTATCATTAAGGAGGTCTTaGTTCTTTTCCAGCCAACCA +
Preference number: 5 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLSLRRS*FFSSQP
Trigger: TGGTTGGCTGGAAAAGAACAAAGACCTCCTTAATGA...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACTCAAAGATGCAGAAGTaGTCTCAAAGTGCAGAGTGG +
Preference number: 5 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHSKMQK*SQSAEW
Trigger: CCACTCTGCACTTTGAGACAACTTCTGCATCTTTGA...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGTCACCTTATCTAGCTTaGCAGTTGCTTCATGCAAGC +
Preference number: 5 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMSPYLA*QLLHAS
Trigger: GCTTGCATGAAGCAACTGCAAAGCTAGATAAGGTGA...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CACCAACATGCCCTAGTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATATTAGAAATCTCTTCTaGGAGGTTCTTGTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: HQHALVPMKRDWSKDIFYIRNLF*EVLVLP
Trigger: AGGGAGAACAAGAACCTCCAAGAAGAGATTTCTAAT...ATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGACTAGGGCATGTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACATCACAAACTTGCTCTTaGGAAAGGTCCTTGGATTCA +
Preference number: 5 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTSQTCS*ERSLDS
Trigger: TGAATCCAAGGACCTTTCCAAAGAGCAAGTTTGTGA...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGAGAATCTTCTGGAATTaGATTCGCATCAGTTTGCCC +
Preference number: 5 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMRIFWN*IRISLP
Trigger: GGGCAAACTGATGCGAATCAAATTCCAGAAGATTCT...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTAGCTGCTCTGTTAAGTTaGCTGATATCCTCATTTAGA +
Preference number: 5 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLAALLS*LISSFR
Trigger: TCTAAATGAGGATATCAGCAAACTTAACAGAGCAGC...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAAGCTGCAAGTCACTCTaGTCTTTTTCCAGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLSCKSL*SFSSFC
Trigger: GCAGAAACTGGAAAAAGACAAGAGTGACTTGCAGCT...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCCCATGAAGCGTGACTGGTCTAAGGACATCTTCTATGAGTCCTACCCATTATTTATCCATCTGAGTTaGCATCCTGCTCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: VPMKRDWSKDIFYESYPLFIHLS*HPAQIL
Trigger: AAGAATCTGAGCAGGATGCAAACTCAGATGGATAAA...TAATGGGTAGGACTCATAGAAGATGTCCTTAGACCAGTCACGCTTCATGGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACTTTGAGTTTATTGACTaGAGATTCTGCCACCTCTGC +
Preference number: 5 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHFEFID*RFCHLC
Trigger: GCAGAGGTGGCAGAATCTCAAGTCAATAAACTCAAA...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACAGGGATGCTATTCTTCTaGAACCTTTTTCCCAAACTC +
Preference number: 5 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTGMLFF*NLFPKL
Trigger: GAGTTTGGGAAAAAGGTTCAAGAAGAATAGCATCCC...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp GTCCATAAGAACAAACAGAACCCATGTCTGTCTCACGGCCTCCACTGCAATGCTTTGATTAGGAGAGTTTaGCCTACATGTTCAAATTGC +
Preference number: 5 (lower is better)
Translates to: VHKNKQNPCLSHGLHCNALIRRV*PTCSNC
Trigger: GCAATTTGAACATGTAGGCAAAACTCTCCTAATCAA...AGCATTGCAGTGGAGGCCGTGAGACAGACATGGGTTCTGTTTGTTCTTATGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 90 bp AGGAGCCAAGTAATTCTTCAGCTGCTTTTCTGCTGCTCACAAACTTaGTCTTTGGAAAGGTCCTTGGATTCAGAATGCAGTACCTTTGTT +
Preference number: 5 (lower is better)
Translates to: RSQVILQLLFCCSQT*SLERSLDSECSTFV
Trigger: AACAAAGGTACTGCATTCTGAATCCAAGGACCTTTCCAAAGAGCAAGTTTGTGAGCAGCAGAAAAGCAGCTGAAGAATTACTTGGCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS-3UTR CAA 90 bp TTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATTCACCAAGGAAGTCTGAGGGATTaGCAGATACCAGGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: FRGESSQSCLTLVKTIHQGSLRD*QIPGAG
Trigger: ACCTGCTCCTGGTATCTGCAAATCCCTCAGACTTCC...TTGGTGAATGGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ACAAATCCAGCATATTACCTGTCACTGAATGTCTCGTGTGGGGTTACCTCCATGTGCAGCTTCTGGAATTaGGTTTCCTGTTTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: TNPAYYLSLNVSCGVTSMCSFWN*VSCFLV
Trigger: AACTAAGAAACAGGAAACCAAATTCCAGAAGCTGCA...CATGGAGGTAACCCCACACGAGACATTCAGTGACAGGTAATATGCTGGATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAATACTTGGAAAGGTATaGATTGGCTTGTGTTTCCGC +
Preference number: 5 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLILGKV*IGLCFR
Trigger: GCGGAAACACAAGCCAATCAATACCTTTCCAAGTAT...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS TCA 90 bp TTGCCAGTTCCTTCTTGGCATCCTCCAAGTCTTCTGTTCTCTGGATaGCATTGTTTTCATACTTCATTCTCCATTGCACCATTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: LPVPSWHPPSLLFSG*HCFHTSFSIAPFQH
Trigger: ATGCTGAAATGGTGCAATGGAGAATGAAGTATGAAAACAATGTCATCCAGAGAACAGAAGACTTGGAGGATGCCAAGAAGGAACTGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS-3UTR CAA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACATATTCGTTACCAACTTaGATTCTAGGATGGATCAAG +
Preference number: 5 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTYSLPT*ILGWIK
Trigger: CTTGATCCATCCTAGAATCAAAGTTGGTAACGAATA...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACTACCTGTTCTATAGTTaGACCTCTGGTAACATATTC +
Preference number: 5 (lower is better)
Translates to: LFGLESYFQAVTMLGSVHYLFYS*TSGNIF
Trigger: GAATATGTTACCAGAGGTCAAACTATAGAACAGGTA...GTGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACACAGAATGCAGTACCTTaGTTTAAAATCAGCATACTG +
Preference number: 5 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTQNAVP*FKISIL
Trigger: CAGTATGCTGATTTTAAACAAAGGTACTGCATTCTG...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTATTTTCCAGTTTCTGCTaGACCTGCTGTAGATTTTCT +
Preference number: 5 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLFSSFC*TCCRFS
Trigger: AGAAAATCTACAGCAGGTCAAGCAGAAACTGGAAAA...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp CCTTTTTGGCCTGGAGTCATATTTTCAAGCTGTCACCATGCTTGGGTCTGTACAGTTCTCTGGATGACATaGTTTTCATACTTCATTCTC +
Preference number: 5 (lower is better)
Translates to: PFWPGVIFSSCHHAWVCTVLWMT*FSYFIL
Trigger: GAGAATGAAGTATGAAAACAATGTCATCCAGAGAAC...TGTACAGACCCAAGCATGGTGACAGCTTGAAAATATGACTCCAGGCCAAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS TCA 90 bp TTTCTTTCAAGTTCTGCTTTAGCTTCCAAGAGTTCAAGCTGGAAATaGAGAATCTTGCTTTCATTACGTTCCAGGGCTCCCTCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: FLSSSALASKSSSWK*RILLSLRSRAPSVS
Trigger: AGAAACAGAGGGAGCCCTGGAACGTAATGAAAGCAAGATTCTTCATTTCCAGCTTGAACTCTTGGAAGCTAAAGCAGAACTTGAAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 90 bp AATTTTGCACTTTTAGCTGAAGTTTATCCATCTGAGTTTGCATCCTaGTCAGATTCTTCTTGTCTTCCTCTGCCTGATAGGTCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: NFALLAEVYPSEFAS*SDSSCLPLPDRSAL
Trigger: AAGAGCTGACCTATCAGGCAGAGGAAGACAAGAAGAATCTGAGCAGGATGCAAACTCAGATGGATAAACTTCAGCTAAAAGTGCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ATGTCTCGTGTGGGGTTACCTCCATGTTTAAAGCATGTACCAGCATATAGCCTAAGCTCTTATGTTCCATaGGATCAAAATAAGTGCATC +
Preference number: 5 (lower is better)
Translates to: MSRVGLPPCLKHVPAYSLSSYVP*DQNKCI
Trigger: GATGCACTTATTTTGATCCAATGGAACATAAGAGCT...TAGGCTATATGCTGGTACATGCTTTAAACATGGAGGTAACCCCACACGAGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CCA 90 bp TTGACCTTTTCCATTTCAGTTAAGTTCTTGGTCCCTTCTCTAACCTaGTTTGTCAGATTAGAAATCTCTTCTTGGAGGTTCTTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: LTFSISVKFLVPSLT*FVRLEISSWRFLFS
Trigger: GGAGAACAAGAACCTCCAAGAAGAGATTTCTAATCTGACAAACCAGGTTAGAGAAGGGACCAAGAACTTAACTGAAATGGAAAAGGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS-3UTR CAA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCACTGCTCTTCAACATTaGCCAGTGTCTCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTTALQH*PVSLAQ
Trigger: CTGAGCAAGAGACACTGGCAAATGTTGAAGAGCAGT...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCGTCAAGTTCTTGACCTaGTGCTCTGTAGTACGCTTC +
Preference number: 5 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTVKFLT*CSVVRF
Trigger: GAAGCGTACTACAGAGCACAAGGTCAAGAACTTGAC...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCTCCTCAGTCAAGTTCTaGACCTTGTGCTCTGTAGTA +
Preference number: 5 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTSSVKF*TLCSVV
Trigger: TACTACAGAGCACAAGGTCAAGAACTTGACTGAGGA...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 90 bp TCTTGCTTTAATTTTGAGTTTATTGACTTGAGATTCTGCCACCTCTaGCCTTTCCTTCACTTCATTCAACTCATGTTGCTGTTTCTTATA +
Preference number: 5 (lower is better)
Translates to: SCFNFEFIDLRFCHL*PFLHFIQLMLLFLI
Trigger: TATAAGAAACAGCAACATGAGTTGAATGAAGTGAAGGAAAGGGCAGAGGTGGCAGAATCTCAAGTCAATAAACTCAAAATTAAAGCAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCATACTTCATTCTCCATaGCACCATTTCAGCATTGAC +
Preference number: 5 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTILHSP*HHFSID
Trigger: GTCAATGCTGAAATGGTGCAATGGAGAATGAAGTAT...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS-3UTR CAA 90 bp ATTCATAGATTTAGGGGTGAATCAAGCCAAAGTTGCCTAACTTTAGTAAAAACCGGTATTTTGTTCACATaGGGATTTATGCATCTCACA +
Preference number: 5 (lower is better)
Translates to: IHRFRGESSQSCLTLVKTGILFT*GFMHLT
Trigger: TGTGAGATGCATAAATCCCAATGTGAACAAAATACC...GGTTTTTACTAAAGTTAGGCAACTTTGGCTTGATTCACCCCTAAATCTATGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 72 bp GCCAGACTGCAGCTGCTTCTGGTCCAGCCTGGCTGCTaGAGAGCGGACCTTCCCGAGGTCAGACAGGGCGTC +
Preference number: 6 (lower is better)
Translates to: ARLQLLLVQPGC*RADLPEVRQGV
Trigger: GACGCCCTGTCTGACCTCGGGAAGGTCCGCTCTGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CCA 72 bp CAGTCGGCAAGGGCCTTGCCAGACTGCAGCTGCTTCTaGTCCAGCCTGGCTGCTGCAGAGCGGACCTTCCCG +
Preference number: 6 (lower is better)
Translates to: QSARALPDCSCF*SSLAAAERTFP
Trigger: CGGGAAGGTCCGCTCTGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGCAAGGCCCTTGCCGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp CTTGCCAGACTGCAGCTGCTTCTGGTCCAGCCTGGCTaGTGCAGAGCGGACCTTCCCGAGGTCAGACAGGGC +
Preference number: 6 (lower is better)
Translates to: LARLQLLLVQPG*CRADLPEVRQG
Trigger: GCCCTGTCTGACCTCGGGAAGGTCCGCTCTGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGCAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp TGCTTCCAGTCGGCAAGGGCCTTGCCAGACTGCAGCTaGTTCTGGTCCAGCCTGGCTGCTGCAGAGCGGACC +
Preference number: 6 (lower is better)
Translates to: CFQSARALPDCS*FWSSLAAAERT
Trigger: GGTCCGCTCTGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGCAAGGCCCTTGCCGACTGGAAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CCA 72 bp GGGCCTTGCCAGACTGCAGCTGCTTCTGGTCCAGCCTaGCTGCTGCAGAGCGGACCTTCCCGAGGTCAGACA +
Preference number: 6 (lower is better)
Translates to: GPCQTAAASGPA*LLQSGPSRGQT
Trigger: TGTCTGACCTCGGGAAGGTCCGCTCTGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGCAAGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp GAGGCATCCAGCAACGCCTGGGACTCCTCGTGCTTCTaGTTCCAGTCGGCAAGGGCCTTGCCAGACTGCAGC +
Preference number: 6 (lower is better)
Translates to: EASSNAWDSSCF*FQSARALPDCS
Trigger: GCTGCAGTCTGGCAAGGCCCTTGCCGACTGGAAGCAGAAGCACGAGGAGTCCCAGGCGTTGCTGGATGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp TGCTTCTGCTTCCAGTCGGCAAGGGCCTTGCCAGACTaGAGCTGCTTCTGGTCCAGCCTGGCTGCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: CFCFQSARALPD*SCFWSSLAAAE
Trigger: CTCTGCAGCAGCCAGGCTGGACCAGAAGCAGCTGCAGTCTGGCAAGGCCCTTGCCGACTGGAAGCAGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp GCATCGCTCAAGTCTGCGGGCTCCCCTCTGGGCCTCTaGACTGCGACGGATTTCACCCTCCAGTTCACCTTC +
Preference number: 6 (lower is better)
Translates to: ASLKSAGSPLGL*TATDFTLQFTF
Trigger: GAAGGTGAACTGGAGGGTGAAATCCGTCGCAGTGCAGAGGCCCAGAGGGGAGCCCGCAGACTTGAGCGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 72 bp GCTCAAGTCTGCGGGCTCCCCTCTGGGCCTCTGCACTaGGACGGATTTCACCCTCCAGTTCACCTTCCAGTT +
Preference number: 6 (lower is better)
Translates to: AQVCGLPSGPLH*DGFHPPVHLPV
Trigger: AACTGGAAGGTGAACTGGAGGGTGAAATCCGTCGCAGTGCAGAGGCCCAGAGGGGAGCCCGCAGACTTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CCA 72 bp TCTTTGATGCATCGCTCAAGTCTGCGGGCTCCCCTCTaGGCCTCTGCACTGCGACGGATTTCACCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: SLMHRSSLRAPL*ASALRRISPSS
Trigger: ACTGGAGGGTGAAATCCGTCGCAGTGCAGAGGCCCAGAGGGGAGCCCGCAGACTTGAGCGATGCATCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS TCA 72 bp CCTCCAGCCTCTCATTCAAGTCAGCCAGGTCTTGGGTaGGGTCAGCTCTCTCCCTTTCCATCTTGGCTCGAG +
Preference number: 6 (lower is better)
Translates to: PPASHSSQPGLG*GQLSPFPSWLE
Trigger: CTCGAGCCAAGATGGAAAGGGAGAGAGCTGACCTCACCCAAGACCTGGCTGACTTGAATGAGAGGCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp GGCATTTCTGGCATTGGCCACCCCCATGGCTTCGGCTaGCTCCTGCAATCTAATTGCCAGTTCCTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: GISGIGHPHGFG*LLQSNCQFLLG
Trigger: GCCAAGAAGGAACTGGCAATTAGATTGCAGGAGGCAGCCGAAGCCATGGGGGTGGCCAATGCCAGAAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS TCA 72 bp TCTTCTTGTCTTCCTCTGCCTGATAGGTCAGCTCTTTaGTGCATCGCTCAAGTCTGCGGGCTCCCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: SSCLPLPDRSAL*CIAQVCGLPSG
Trigger: CCCAGAGGGGAGCCCGCAGACTTGAGCGATGCATCAAAGAGCTGACCTATCAGGCAGAGGAAGACAAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 72 bp AGCTCTTCTTCTGACAGCCTGCGGCCACGCTCTGTCTaGTCTTGCAGGGACCTTAGATCCTCTAGTTCAGAC +
Preference number: 6 (lower is better)
Translates to: SSSSDSLRPRSV*SCRDLRSSSSD
Trigger: GTCTGAACTAGAGGATCTAAGGTCCCTGCAAGAGCAGACAGAGCGTGGCCGCAGGCTGTCAGAAGAAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CCA 72 bp ACCTCCTCCAGCCTCTCATTCAAGTCAGCCAGGTCTTaGGTGAGGTCAGCTCTCTCCCTTTCCATCTTGGCT +
Preference number: 6 (lower is better)
Translates to: TSSSLSFKSARS*VRSALSLSILA
Trigger: AGCCAAGATGGAAAGGGAGAGAGCTGACCTCACCCAAGACCTGGCTGACTTGAATGAGAGGCTGGAGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 72 bp TACCTCCTCCAGCCTCTCATTCAAGTCAGCCAGGTCTaGGGTGAGGTCAGCTCTCTCCCTTTCCATCTTGGC +
Preference number: 6 (lower is better)
Translates to: YLLQPLIQVSQV*GEVSSLPFHLG
Trigger: GCCAAGATGGAAAGGGAGAGAGCTGACCTCACCCAAGACCTGGCTGACTTGAATGAGAGGCTGGAGGAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS TCA 72 bp GTTATTGGCAACAGCAAAGATGTGAGGGGGAGCCTCTaGTCGCCTCTTCCCTTTGTAGGCGGCCATGACTTC +
Preference number: 6 (lower is better)
Translates to: VIGNSKDVRGSL*SPLPFVGGHDF
Trigger: GAAGTCATGGCCGCCTACAAAGGGAAGAGGCGATCAGAGGCTCCCCCTCACATCTTTGCTGTTGCCAATAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS TCA 72 bp TTGAATCTGAAGCTGGCCCAGGGATTTGGTTGCTTCTaGCACCTGCCGGTTGGCACAGCTAAGCTGGAGTTC +
Preference number: 6 (lower is better)
Translates to: LNLKLAQGFGCF*HLPVGTAKLEF
Trigger: GAACTCCAGCTTAGCTGTGCCAACCGGCAGGTGTCAGAAGCAACCAAATCCCTGGGCCAGCTTCAGATTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS TCA 72 bp TGGCCTGTAGTAGAAGCAGCTCAGCTTCACTTCTTCTaGGGAAGGCTGCGGCTTCTCCAAGGTCTGACAGAT +
Preference number: 6 (lower is better)
Translates to: WPVVEAAQLHFF*GRLRLLQGLTD
Trigger: ATCTGTCAGACCTTGGAGAAGCCGCAGCCTTCCTCAGAAGAAGTGAAGCTGAGCTGCTTCTACTACAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CAA 90 bp GCTCAGCCAGGCTGTCTGCATGTCTCTTCTTCAAAGATGCAGAAGTaGTCTCAAAGTGCAGAGTGGCCTCTTCCATGTCTCGGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: AQPGCLHVSSSKMQK*SQSAEWPLPCLGAA
Trigger: AGCTGCACCGAGACATGGAAGAGGCCACTCTGCACTTTGAGACAACTTCTGCATCTTTGAAGAAGAGACATGCAGACAGCCTGGCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS TCA 72 bp GAGCCTCTGATCGCCTCTTCCCTTTGTAGGCGGCCATaGCTTCTTTCTGATACACGGGAAGCCATTTGTAAG +
Preference number: 6 (lower is better)
Translates to: EPLIASSLCRRP*LLSDTREAICK
Trigger: CTTACAAATGGCTTCCCGTGTATCAGAAAGAAGTCATGGCCGCCTACAAAGGGAAGAGGCGATCAGAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 72 bp GTCTCCTTTTCCAGCTGCCCTCTCAGGTCTTCAATCTaGCGAGTGAAGTTGCTCTTTTCCCTGGAAAGTTGG +
Preference number: 6 (lower is better)
Translates to: VSFSSCPLRSSI*RVKLLFSLESW
Trigger: CCAACTTTCCAGGGAAAAGAGCAACTTCACTCGGCAGATTGAAGACCTGAGAGGGCAGCTGGAAAAGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 72 bp AGGTCTTGGGTGAGGTCAGCTCTCTCCCTTTCCATCTaGGCTCGAGTGGTCCTTTCAGCTTCTAGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: RSWVRSALSLSI*ARVVLSASSFS
Trigger: AGAGAAACTAGAAGCTGAAAGGACCACTCGAGCCAAGATGGAAAGGGAGAGAGCTGACCTCACCCAAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 90 bp AAGTCAGCCAGGTCTTGGGTGAGGTCAGCTCTCTCCCTTTCCATCTaGGCTCGAGTGGTCCTTTCAGCTTCTAGTTTCTCTTTCAAATCC +
Preference number: 6 (lower is better)
Translates to: KSARSWVRSALSLSI*ARVVLSASSFSFKS
Trigger: GGATTTGAAAGAGAAACTAGAAGCTGAAAGGACCACTCGAGCCAAGATGGAAAGGGAGAGAGCTGACCTCACCCAAGACCTGGCTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS TCA 72 bp CACAGTAACTGCTCCACAGGAGCAAAAGTGGAAGTCTaGGGGATTTGCAGATACCAGGAGCAGGTCATGAAG +
Preference number: 6 (lower is better)
Translates to: HSNCSTGAKVEV*GICRYQEQVMK
Trigger: CTTCATGACCTGCTCCTGGTATCTGCAAATCCCTCAGACTTCCACTTTTGCTCCTGTGGAGCAGTTACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS TCA 72 bp GTGGGCAATGGTGTCTTGCTTCTTCTTCAGTTCTTCTaGCAAGTTTGCTGCCTCAATGGCTGCCTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: VGNGVLLLLQFF*QVCCLNGCLLG
Trigger: GCCAAGAAGGCAGCCATTGAGGCAGCAAACTTGTCAGAAGAACTGAAGAAGAAGCAAGACACCATTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 72 bp TCCAGCTGGATCTTGGATTTAATCAGCCACTCGCACTaGTCTTCAACATTTGCCAGTGTCTCTTGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SSWILDLISHSH*SSTFASVSCSA
Trigger: GGCTGAGCAAGAGACACTGGCAAATGTTGAAGAGCAGTGCGAGTGGCTGATTAAATCCAAGATCCAGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp GAACTCGCCACTCTCACTCCACAGCTTTGTCTTTTGTaGTGCCAGGTCATTTGCCAACTGAGTCACCTTATC +
Preference number: 6 (lower is better)
Translates to: ELATLTPQLCLL*CQVICQLSHLI
Trigger: GATAAGGTGACTCAGTTGGCAAATGACCTGGCAGCACAAAAGACAAAGCTGTGGAGTGAGAGTGGCGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 72 bp AGCTGCCCTCTCAGGTCTTCAATCTGCCGAGTGAAGTaGCTCTTTTCCCTGGAAAGTTGGTTTATCAGAGCC +
Preference number: 6 (lower is better)
Translates to: SCPLRSSICRVK*LFSLESWFIRA
Trigger: GGCTCTGATAAACCAACTTTCCAGGGAAAAGAGCAACTTCACTCGGCAGATTGAAGACCTGAGAGGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS TCA 72 bp GCTGCAAGTCACTCTTGTCTTTTTCCAGTTTCTGCTTaGCCTGCTGTAGATTTTCTACCTGGCCCTCGAGCT +
Preference number: 6 (lower is better)
Translates to: AASHSCLFPVSA*PAVDFLPGPRA
Trigger: AGCTCGAGGGCCAGGTAGAAAATCTACAGCAGGTCAAGCAGAAACTGGAAAAAGACAAGAGTGACTTGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp AGTTCCCTTTCACAGTTCATTCTCGCTTTTCTCTCCTaGTCAAGGGCACCCTCAAGCTCATCAACTTGCTGT +
Preference number: 6 (lower is better)
Translates to: SSLSQFILAFLS*SRAPSSSSTCC
Trigger: ACAGCAAGTTGATGAGCTTGAGGGTGCCCTTGAGCAGGAGAGAAAAGCGAGAATGAACTGTGAAAGGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp CAGAGTTTCTCAGCATTTGCCTTAGCTCTTGTCATCTaGTCAACACGGGTCAGGAGGTCATCTACTTCTAGC +
Preference number: 6 (lower is better)
Translates to: QSFSAFALALVI*STRVRRSSTSS
Trigger: GCTAGAAGTAGATGACCTCCTGACCCGTGTTGAGCAGATGACAAGAGCTAAGGCAAATGCTGAGAAACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CCA 72 bp TTTCTCGATTGTGAAGCATGTCCTGAAAGGCGTTATTaGCAACAGCAAAGATGTGAGGGGGAGCCTCTGATC +
Preference number: 6 (lower is better)
Translates to: FLDCEACPERRY*QQQRCEGEPLI
Trigger: GATCAGAGGCTCCCCCTCACATCTTTGCTGTTGCCAATAACGCCTTTCAGGACATGCTTCACAATCGAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CCA 72 bp TCACCTTCCAGTTCACGAACCCTGGATTCTAGTTTCTaGATTTGCTTTCTACTCCCCATCAGGGCCATCTGT +
Preference number: 6 (lower is better)
Translates to: SPSSSRTLDSSF*ICFLLPIRAIC
Trigger: ACAGATGGCCCTGATGGGGAGTAGAAAGCAAATCCAGAAACTAGAATCCAGGGTTCGTGAACTGGAAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CAA 72 bp GCCACTAGCCACTTAAACATCCTTTCATACATTGACTaGGACAGGGCACCGACAGCACAGGTTACCTGTTCT +
Preference number: 6 (lower is better)
Translates to: ATSHLNILSYID*DRAPTAQVTCS
Trigger: AGAACAGGTAACCTGTGCTGTCGGTGCCCTGTCCAAGTCAATGTATGAAAGGATGTTTAAGTGGCTAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CAA 72 bp GGCTGTCTGCATGTCTCTTCTTCAAAGATGCAGAAGTaGTCTCAAAGTGCAGAGTGGCCTCTTCCATGTCTC +
Preference number: 6 (lower is better)
Translates to: GCLHVSSSKMQK*SQSAEWPLPCL
Trigger: GAGACATGGAAGAGGCCACTCTGCACTTTGAGACAACTTCTGCATCTTTGAAGAAGAGACATGCAGACAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 72 bp AGCTGCAAGTCACTCTTGTCTTTTTCCAGTTTCTGCTaGACCTGCTGTAGATTTTCTACCTGGCCCTCGAGC +
Preference number: 6 (lower is better)
Translates to: SCKSLLSFSSFC*TCCRFSTWPSS
Trigger: GCTCGAGGGCCAGGTAGAAAATCTACAGCAGGTCAAGCAGAAACTGGAAAAAGACAAGAGTGACTTGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 90 bp TGGCTGCTTTCCAGGTTCTCCATACTTTCCCGATTCAGCTTTAAATaGCCCTCCAGTTTGTGCAGTTCCCTTTCACAGTTCATTCTCGCT +
Preference number: 6 (lower is better)
Translates to: WLLSRFSILSRFSFK*PSSLCSSLSQFILA
Trigger: AGCGAGAATGAACTGTGAAAGGGAACTGCACAAACTGGAGGGCAATTTAAAGCTGAATCGGGAAAGTATGGAGAACCTGGAAAGCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS TCA 72 bp TGGAATTTGGTTTCCTGTTTCTTAGTTATTTCCAGCTaGGCCAAACTGGATCCTCCTACCTCCTCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: WNLVSCFLVISS*AKLDPPTSSSL
Trigger: GAGGCTGGAGGAGGTAGGAGGATCCAGTTTGGCTCAGCTGGAAATAACTAAGAAACAGGAAACCAAATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp TCTAGCTGCAAGTCACTCTTGTCTTTTTCCAGTTTCTaGTTGACCTGCTGTAGATTTTCTACCTGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: SSCKSLLSFSSF*LTCCRFSTWPS
Trigger: CGAGGGCCAGGTAGAAAATCTACAGCAGGTCAAGCAGAAACTGGAAAAAGACAAGAGTGACTTGCAGCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp TCAATTCTGCTCTTAGCTTCAGAATCCAGACTAGACTaGAGGGAGTCAATGGTACACTGCTGCTTCCTCCTA +
Preference number: 6 (lower is better)
Translates to: SILLLASESRLD*RESMVHCCFLL
Trigger: TAGGAGGAAGCAGCAGTGTACCATTGACTCCCTGCAGTCTAGTCTGGATTCTGAAGCTAAGAGCAGAATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CAA 72 bp TACTTCATTCTCCATTGCACCATTTCAGCATTGACTTaGGATAAGGTCCGGTGCAGCTCAGCCTTGACCTCT +
Preference number: 6 (lower is better)
Translates to: YFILHCTISALT*DKVRCSSALTS
Trigger: AGAGGTCAAGGCTGAGCTGCACCGGACCTTATCCAAAGTCAATGCTGAAATGGTGCAATGGAGAATGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 90 bp CTGCCAGGTCATTTGCCAACTGAGTCACCTTATCTAGCTTTGCAGTaGCTTCATGCAAGCGCTCTTCATATAGAGTACAGAGTTTCTCAG +
Preference number: 6 (lower is better)
Translates to: LPGHLPTESPYLALQ*LHASALHIEYRVSQ
Trigger: CTGAGAAACTCTGTACTCTATATGAAGAGCGCTTGCATGAAGCAACTGCAAAGCTAGATAAGGTGACTCAGTTGGCAAATGACCTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp CCAGGTTCTCCATACTTTCCCGATTCAGCTTTAAATTaGCCTCCAGTTTGTGCAGTTCCCTTTCACAGTTCA +
Preference number: 6 (lower is better)
Translates to: PGSPYFPDSALN*PPVCAVPFHSS
Trigger: TGAACTGTGAAAGGGAACTGCACAAACTGGAGGGCAATTTAAAGCTGAATCGGGAAAGTATGGAGAACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 72 bp ATAAGTGCATCCCTTTCTTCCAGAATCTTCTGGAATTaGATTCGCATCAGTTTGCCCTGTGCTCTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: ISASLSSRIFWN*IRISLPCALAW
Trigger: CCAAGCCAGAGCACAGGGCAAACTGATGCGAATCAAATTCCAGAAGATTCTGGAAGAAAGGGATGCACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 72 bp TGGGCCTCCTGCACAACCTTGGCTGCTCTGTTAAGTTaGCTGATATCCTCATTTAGAAACTCTACTTCCTCA +
Preference number: 6 (lower is better)
Translates to: WASCTTLAALLS*LISSFRNSTSS
Trigger: TGAGGAAGTAGAGTTTCTAAATGAGGATATCAGCAAACTTAACAGAGCAGCCAAGGTTGTGCAGGAGGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 72 bp CCAGGTCATTTGCCAACTGAGTCACCTTATCTAGCTTaGCAGTTGCTTCATGCAAGCGCTCTTCATATAGAG +
Preference number: 6 (lower is better)
Translates to: PGHLPTESPYLA*QLLHASALHIE
Trigger: CTCTATATGAAGAGCGCTTGCATGAAGCAACTGCAAAGCTAGATAAGGTGACTCAGTTGGCAAATGACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 90 bp TTTGTGCTGCCAGGTCATTTGCCAACTGAGTCACCTTATCTAGCTTaGCAGTTGCTTCATGCAAGCGCTCTTCATATAGAGTACAGAGTT +
Preference number: 6 (lower is better)
Translates to: FVLPGHLPTESPYLA*QLLHASALHIEYRV
Trigger: AACTCTGTACTCTATATGAAGAGCGCTTGCATGAAGCAACTGCAAAGCTAGATAAGGTGACTCAGTTGGCAAATGACCTGGCAGCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 90 bp TTGTTTTCATACTTCATTCTCCATTGCACCATTTCAGCATTGACTTaGGATAAGGTCCGGTGCAGCTCAGCCTTGACCTCTTGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: LFSYFILHCTISALT*DKVRCSSALTSCSS
Trigger: GGAAGAACAAGAGGTCAAGGCTGAGCTGCACCGGACCTTATCCAAAGTCAATGCTGAAATGGTGCAATGGAGAATGAAGTATGAAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS TCA 72 bp AACTCATGTTGCTGTTTCTTATACTTGGAAAGGTATTaGTTGGCTTGTGTTTCCGCCACCTCGACTTGCTGC +
Preference number: 6 (lower is better)
Translates to: NSCCCFLYLERY*LACVSATSTCC
Trigger: GCAGCAAGTCGAGGTGGCGGAAACACAAGCCAATCAATACCTTTCCAAGTATAAGAAACAGCAACATGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 72 bp ATGCCCATTGGCTTCTCAATGAGATCTATGCAAGCTTaGAAATCCAGACCAAAGCCAATAGACACCCATTCA +
Preference number: 6 (lower is better)
Translates to: MPIGFSMRSMQA*KSRPKPIDTHS
Trigger: TGAATGGGTGTCTATTGGCTTTGGTCTGGATTTGCAAGCTTGCATAGATCTCATTGAGAAGCCAATGGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CAA 90 bp AAGGAGCCAAGTAATTCTTCAGCTGCTTTTCTGCTGCTCACAAACTaGCTCTTTGGAAAGGTCCTTGGATTCAGAATGCAGTACCTTTGT +
Preference number: 6 (lower is better)
Translates to: KEPSNSSAAFLLLTN*LFGKVLGFRMQYLC
Trigger: ACAAAGGTACTGCATTCTGAATCCAAGGACCTTTCCAAAGAGCAAGTTTGTGAGCAGCAGAAAAGCAGCTGAAGAATTACTTGGCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 90 bp GCATCCCTTTCTTCCAGAATCTTCTGGAATTTGATTCGCATCAGTTaGCCCTGTGCTCTGGCTTGGAACAATGTGAAGACTTTAGATAGT +
Preference number: 6 (lower is better)
Translates to: ASLSSRIFWNLIRIS*PCALAWNNVKTLDS
Trigger: ACTATCTAAAGTCTTCACATTGTTCCAAGCCAGAGCACAGGGCAAACTGATGCGAATCAAATTCCAGAAGATTCTGGAAGAAAGGGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 90 bp TGGATCAAAATAAGTGCATCCCTTTCTTCCAGAATCTTCTGGAATTaGATTCGCATCAGTTTGCCCTGTGCTCTGGCTTGGAACAATGTG +
Preference number: 6 (lower is better)
Translates to: WIKISASLSSRIFWN*IRISLPCALAWNNV
Trigger: CACATTGTTCCAAGCCAGAGCACAGGGCAAACTGATGCGAATCAAATTCCAGAAGATTCTGGAAGAAAGGGATGCACTTATTTTGATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 90 bp ATGACATTGTTTTCATACTTCATTCTCCATTGCACCATTTCAGCATaGACTTTGGATAAGGTCCGGTGCAGCTCAGCCTTGACCTCTTGT +
Preference number: 6 (lower is better)
Translates to: MTLFSYFILHCTISA*TLDKVRCSSALTSC
Trigger: ACAAGAGGTCAAGGCTGAGCTGCACCGGACCTTATCCAAAGTCAATGCTGAAATGGTGCAATGGAGAATGAAGTATGAAAACAATGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS TCA 72 bp CCAAATGCTTCCAAGATAGTATTCGCTTGCATGATTTaGTCTTCTAACGCCCCCTGCTTTTTCCTGGATTCA +
Preference number: 6 (lower is better)
Translates to: PNASKIVFACMI*SSNAPCFFLDS
Trigger: TGAATCCAGGAAAAAGCAGGGGGCGTTAGAAGATCAAATCATGCAAGCGAATACTATCTTGGAAGCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS GCA 72 bp GTAATTCTTCAGCTGCTTTTCTGCTGCTCACAAACTTaGTCTTTGGAAAGGTCCTTGGATTCAGAATGCAGT +
Preference number: 6 (lower is better)
Translates to: VILQLLFCCSQT*SLERSLDSECS
Trigger: ACTGCATTCTGAATCCAAGGACCTTTCCAAAGAGCAAGTTTGTGAGCAGCAGAAAAGCAGCTGAAGAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp CTTTTAGCTGAAGTTTATCCATCTGAGTTTGCATCCTaGTCAGATTCTTCTTGTCTTCCTCTGCCTGATAGG +
Preference number: 6 (lower is better)
Translates to: LLAEVYPSEFAS*SDSSCLPLPDR
Trigger: CCTATCAGGCAGAGGAAGACAAGAAGAATCTGAGCAGGATGCAAACTCAGATGGATAAACTTCAGCTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CCA 72 bp GTACCTTTGTTTAAAATCAGCATACTGCAGTCGGTTTaGAAAACCTTCACGGCATATCCTAGTCCCTTCCAA +
Preference number: 6 (lower is better)
Translates to: VPLFKISILQSV*KTFTAYPSPFQ
Trigger: TTGGAAGGGACTAGGATATGCCGTGAAGGTTTTCCAAACCGACTGCAGTATGCTGATTTTAAACAAAGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273353.4
ENST00000478998.5
ENST00000495753.2
CDS CAA 72 bp AGTAATTCTTCAGCTGCTTTTCTGCTGCTCACAAACTaGCTCTTTGGAAAGGTCCTTGGATTCAGAATGCAG +
Preference number: 6 (lower is better)
Translates to: SNSSAAFLLLTN*LFGKVLGFRMQ
Trigger: CTGCATTCTGAATCCAAGGACCTTTCCAAAGAGCAAGTTTGTGAGCAGCAGAAAAGCAGCTGAAGAATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS TCA 72 bp CTCTTCCTTCAGTCCAGCTACTTCTTCTCCTACTTCTaGAGATTTAACAAGAGGCTTGATCTTGAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: LFLQSSYFFSYF*RFNKRLDLEEE
Trigger: CTCTTCTTCAAGATCAAGCCTCTTGTTAAATCTTCAGAAGTAGGAGAAGAAGTAGCTGGACTGAAGGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CCA 72 bp AAAAACACCTTAGTGATTCCAAATCGGTACTGGGTATaGTCTATCTCCAAGGAGCCAAGTAATTCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: KNTLVIPNRYWV*SISKEPSNSSA
Trigger: AGCTGAAGAATTACTTGGCTCCTTGGAGATAGACCATACCCAGTACCGATTTGGAATCACTAAGGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CCA 72 bp AATTTGATTCGCATCAGTTTGCCCTGTGCTCTGGCTTaGAACAATGTGAAGACTTTAGATAGTCTCTCATCT +
Preference number: 6 (lower is better)
Translates to: NLIRISLPCALA*NNVKTLDSLSS
Trigger: AGATGAGAGACTATCTAAAGTCTTCACATTGTTCCAAGCCAGAGCACAGGGCAAACTGATGCGAATCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 72 bp ATACTTTCCCGATTCAGCTTTAAATTGCCCTCCAGTTaGTGCAGTTCCCTTTCACAGTTCATTCTCGCTTTT +
Preference number: 6 (lower is better)
Translates to: ILSRFSFKLPSS*CSSLSQFILAF
Trigger: AAAAGCGAGAATGAACTGTGAAAGGGAACTGCACAAACTGGAGGGCAATTTAAAGCTGAATCGGGAAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS GCA 72 bp TTCAGAATGCAGTACCTTTGTTTAAAATCAGCATACTaGAGTCGGTTTGGAAAACCTTCACGGCATATCCTA +
Preference number: 6 (lower is better)
Translates to: FRMQYLCLKSAY*SRFGKPSRHIL
Trigger: TAGGATATGCCGTGAAGGTTTTCCAAACCGACTGCAGTATGCTGATTTTAAACAAAGGTACTGCATTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273353.4
ENST00000478998.5
ENST00000495753.2
CDS CCA 72 bp TCATGTAATTTTCAAAAAGGCTCGCCAGGAGTCTGTTaGAAGACTTCTGAAATACAGCTACCACTGTTTCAT +
Preference number: 6 (lower is better)
Translates to: SCNFQKGSPGVC*KTSEIQLPLFH
Trigger: ATGAAACAGTGGTAGCTGTATTTCAGAAGTCTTCCAACAGACTCCTGGCGAGCCTTTTTGAAAATTACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273353.4
CDS CCA 72 bp TCCATTTCAGTTAAGTTCTTGGTCCCTTCTCTAACCTaGTTTGTCAGATTAGAAATCTCTTCTTGGAGGTTC +
Preference number: 6 (lower is better)
Translates to: SISVKFLVPSLT*FVRLEISSWRF
Trigger: GAACCTCCAAGAAGAGATTTCTAATCTGACAAACCAGGTTAGAGAAGGGACCAAGAACTTAACTGAAATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5
CDS CAA 72 bp CCAGTTCTTCACAGCCATGAAAGCTCTTATGTTCCATaGGATCAAAATAAGTGCATCCCTTTCTTCCAGAAT +
Preference number: 6 (lower is better)
Translates to: PVLHSHESSYVP*DQNKCIPFFQN
Trigger: ATTCTGGAAGAAAGGGATGCACTTATTTTGATCCAATGGAACATAAGAGCTTTCATGGCTGTGAAGAACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273353.4
ENST00000478998.5