RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYH11 (Homo sapiens)

Ensembl gene IDs: ENSG00000133392, ENSG00000276480

Ensembl transcript IDs: ENST00000300036.6, ENST00000396324.7, ENST00000452625.7, ENST00000570785.1, ENST00000571275.1, ENST00000571505.1, ENST00000571910.2, ENST00000573908.1, ENST00000574119.1, ENST00000576164.6, ENST00000576790.7, ENST00000612165.4, ENST00000616422.4, ENST00000621545.2, ENST00000631693.1, ENST00000631759.1, ENST00000632352.1, ENST00000632632.1, ENST00000632764.1, ENST00000633799.1, ENST00000633845.1, ENST00000634050.1, ENST00000651659.1, ENST00000652121.1

Found 2152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACCTGCGCCTCCAGCTTCTTCTTCTTATGTTCCACCTCCTGCTTaGCCTGGCCCAGGACCCGCAGCTCCCCGGCCAGGTCTGCGTTCT +
Preference number: 1 (lower is better)
Translates to: APAPPASSSYVPPPA*PGPGPAAPRPGLRS
Trigger: AGAACGCAGACCTGGCCGGGGAGCTGCGGGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACATAAGAAGAAGAAGCTGGAGGCGCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 90 bp TCGTCCCGGGCTTGGAGATCCCTTTCGAACTGGCCCTTGAGCGCCTaGATGTTGACTTCCAGCCGCAGTTTGGCGTCCTCCGTGGCTTGC +
Preference number: 1 (lower is better)
Translates to: SSRAWRSLSNWPLSA*MLTSSRSLASSVAC
Trigger: GCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAGTCAACATGCAGGCGCTCAAGGGCCAGTTCGAAAGGGATCTCCAAGCCCGGGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 90 bp GTCCTGGAGTGCGTTCCTTCCCGACAGGCTACTGGCCAGCTCCTCTaGCAGTTCCTCCTTCTCGAGGTCCGCTTGTTTGCGAGCCCTCTC +
Preference number: 1 (lower is better)
Translates to: VLECVPSRQATGQLL*QFLLLEVRLFASPL
Trigger: GAGAGGGCTCGCAAACAAGCGGACCTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAAGGAACGCACTCCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR CCA 90 bp TGCGCCTCCAGCTTCTTCTTCTTATGTTCCACCTCCTGCTTGGCCTaGCCCAGGACCCGCAGCTCCCCGGCCAGGTCTGCGTTCTCTTTC +
Preference number: 1 (lower is better)
Translates to: CASSFFFLCSTSCLA*PRTRSSPARSAFSF
Trigger: GAAAGAGAACGCAGACCTGGCCGGGGAGCTGCGGGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACATAAGAAGAAGAAGCTGGAGGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 90 bp TCGGAGAGCTGGATGTTGAGAGTGGAGATGTGGCGCTCCAGGTTCTaGTTGGCCTCCATCTCCTCGTCCAGCTGGTCTTGCAGGCTGTTC +
Preference number: 1 (lower is better)
Translates to: SESWMLRVEMWRSRF*LASISSSSWSCRLF
Trigger: GAACAGCCTGCAAGACCAGCTGGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGCGCCACATCTCCACTCTCAACATCCAGCTCTCCGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 90 bp ACCCGCAGCTCCCCGGCCAGGTCTGCGTTCTCTTTCTCCAGCGTCTaGTTATTCTTGTCTAGGTTCGCCTTGGCCCTCTTGAACTGCTCA +
Preference number: 1 (lower is better)
Translates to: TRSSPARSAFSFSSV*LFLSRFALALLNCS
Trigger: TGAGCAGTTCAAGAGGGCCAAGGCGAACCTAGACAAGAATAAGCAGACGCTGGAGAAAGAGAACGCAGACCTGGCCGGGGAGCTGCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 90 bp TGCGAGTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTaGTGCCGCTCCTTGGTCTTCTGCAGTTCATCCTCCTTGGCCTGC +
Preference number: 1 (lower is better)
Translates to: CECFCSSSLSSFSAF*CRSLVFCSSSSLAC
Trigger: GCAGGCCAAGGAGGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAGAAGCACTCGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 90 bp CTCTTCTTCCCCTCTTCCAGAGCTTCCACGGTGCTGGCAAAGTCCTaGAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAG +
Preference number: 1 (lower is better)
Translates to: LFFPSSRASTVLAKS*SFFFESESWMLRVE
Trigger: CTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTTGCCAGCACCGTGGAAGCTCTGGAAGAGGGGAAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR TCA 90 bp TTCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTaGCTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGG +
Preference number: 1 (lower is better)
Translates to: FLLPSVGAASPFQFM*LQKALGELCVSEVW
Trigger: CCACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR GCA 90 bp GAGTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTaGCGCTCCTTGGTCTTCTGCAGTTCATCCTCCTTGGCCTGCATC +
Preference number: 1 (lower is better)
Translates to: ECFCSSSLSSFSAFC*RSLVFCSSSSLACI
Trigger: GATGCAGGCCAAGGAGGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAGAAGCACTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 90 bp GGTCAGCTGCGAGTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTaGCTTCTGCTGCCGCTCCTTGGTCTTCTGCAGTTCATCCTCCTT +
Preference number: 1 (lower is better)
Translates to: GQLRVLLFQLLKLIL*LLLPLLGLLQFILL
Trigger: AAGGAGGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAGAAGCACTCGCAGCTGACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR TCA 90 bp GTGTGGAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTaGGAAGTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTG +
Preference number: 1 (lower is better)
Translates to: VWKPGEGERILKGLT*EVGKVCRLGNELGV
Trigger: CACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTCCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR CCA 90 bp TCTCCCTGGCTTCTGCCTCAGCTCTGTCCCTCTCATCCGCGTATTTaGAAGAGATGTTTTTCTCCTCGGCTAACAACTGATCAAATTTCC +
Preference number: 1 (lower is better)
Translates to: SPWLLPQLCPSHPRI*KRCFSPRLTTDQIS
Trigger: GGAAATTTGATCAGTTGTTAGCCGAGGAGAAAAACATCTCTTCCAAATACGCGGATGAGAGGGACAGAGCTGAGGCAGAAGCCAGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR TCA 90 bp GTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTaGAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTG +
Preference number: 1 (lower is better)
Translates to: VQNCRKLLIHWPWFH*SLRLECPFPPQNHL
Trigger: CAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
3UTR GCA 90 bp ATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTaGATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAAC +
Preference number: 1 (lower is better)
Translates to: IEVCVSSVRFLLRTI*IFNNSTSSRPSRRN
Trigger: GTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
3UTR GCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTaGGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTC +
Preference number: 1 (lower is better)
Translates to: TVESCLFTGLGSIEV*VSSVRFLLRTICIF
Trigger: GAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
3UTR CAA 90 bp TGCACCTGCGCCTCCAGCTTCTTCTTCTTATGTTCCACCTCCTGCTaGGCCTGGCCCAGGACCCGCAGCTCCCCGGCCAGGTCTGCGTTC +
Preference number: 2 (lower is better)
Translates to: CTCASSFFFLCSTSC*AWPRTRSSPARSAF
Trigger: GAACGCAGACCTGGCCGGGGAGCTGCGGGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACATAAGAAGAAGAAGCTGGAGGCGCAGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCAGCTCGTTGCTGAGCTaGTCGGCCTGCTGTGTGGCT +
Preference number: 2 (lower is better)
Translates to: RCSFLRLALMRWDSSSASSSLLS*SACCVA
Trigger: AGCCACACAGCAGGCCGAGCAGCTCAGCAACGAGCT...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR TCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACCCTGGCGGCCCGCTCTaGGTCCAGGTCCTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNPGGPL*VQVLLE
Trigger: CTCCAGGAGGACCTGGACTCAGAGCGGGCCGCCAGG...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR TCA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCTCGCCTTGGCCCTCTTaGACTGCTCAAGCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: RCSFLRLALMRWDSSSASSPWPS*TAQAAL
Trigger: CAGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGA...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR CAA 90 bp AGCTCCTGGGTGTCCTGGAGCTGGGAACTGAGGGACGCCACGTCCTaGGCCAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCT +
Preference number: 2 (lower is better)
Translates to: SSWVSWSWELRDATS*ASLMAFPSASLSIP
Trigger: AGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTGGCCAAGGACGTGGCGTCCCTCAGTTCCCAGCTCCAGGACACCCAGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR CAA 90 bp CGGGCTTGGAGATCCCTTTCGAACTGGCCCTTGAGCGCCTGCATGTaGACTTCCAGCCGCAGTTTGGCGTCCTCCGTGGCTTGCAGCTCG +
Preference number: 2 (lower is better)
Translates to: RAWRSLSNWPLSACM*TSSRSLASSVACSS
Trigger: CGAGCTGCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAGTCAACATGCAGGCGCTCAAGGGCCAGTTCGAAAGGGATCTCCAAGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCGCGGTCAGCTGCTGCTaGCTCTTGGCAAAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: RCSFLRLALMRWDSSSASAVSCC*LLAKAF
Trigger: AAAGGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGC...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCTTCCAGCTTCTTCTTTaGTGCAGCTGCCAGGGCACG +
Preference number: 2 (lower is better)
Translates to: RCSFLRLALMRWDSSSASFQLLL*CSCQGT
Trigger: CGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAA...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp CTTGTGGACTTTGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCGCTGCACTTCTTTCAGCCTGTAGCTaGTGGCCCCTGTCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: LVDFVIELRPGPLPIAALLSACS*WPLSSS
Trigger: GGAGGAAGACAGGGGCCAGCAGCTACAGGCTGAAAG...AAGTGCAGCGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CCA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTTGGTGTTGCGTAGCGTaGTCATCAGCTTGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: ASSRARARDRALVSFSLAWCCVA*SSACPA
Trigger: AGCTGGGCAAGCTGATGACCACGCTACGCAACACCA...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CCA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTGAGCTTCCACGGTGCTaGCAAAGTCCTGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: ASSRARARDRALVSFSLAELPRC*QSPAAS
Trigger: AGAAGCTGCAGGACTTTGCCAGCACCGTGGAAGCTC...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR CAA 90 bp GAGAGCTGGATGTTGAGAGTGGAGATGTGGCGCTCCAGGTTCTGCTaGGCCTCCATCTCCTCGTCCAGCTGGTCTTGCAGGCTGTTCCGC +
Preference number: 2 (lower is better)
Translates to: ESWMLRVEMWRSRFC*ASISSSSWSCRLFR
Trigger: GCGGAACAGCCTGCAAGACCAGCTGGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGCGCCACATCTCCACTCTCAACATCCAGCTCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CCA 90 bp CAAGGTCCAGCATCTGCTGGGCCATCTTCTTCCTTTCAGCCTGTAGCTGCTGGCTGCCCTTCTTGGTCTTaGAGGCGCTGGGCAGCGAGC +
Preference number: 2 (lower is better)
Translates to: QGPASAGPSSSFQPVAAGCPSWS*RRWAAS
Trigger: GCTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCA...GCCAGCAGCTACAGGCTGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTGGTCCAGGCCCACGATaGGGTCCACTGCCCACTCCA +
Preference number: 2 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIGPGPR*GPLPTP
Trigger: TGGAGTGGGCAGTGGACCGCATCGTGGGCCTGGACC...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTATCAGCTTGCCCAGCTaGTCCTTGTACAGCTGCCCC +
Preference number: 2 (lower is better)
Translates to: GPLPASSLLQLPGHVAFAISLPS*SLYSCP
Trigger: GGGGCAGCTGTACAAGGAGCAGCTGGGCAAGCTGAT...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACATCTCCTCCAGCTCCTaGTTCTTGGCCGCCAGCCGC +
Preference number: 2 (lower is better)
Translates to: LGLLQLMDVLAHVILGADISSSS*FLAASR
Trigger: GCGGCTGGCGGCCAAGAAGCAGGAGCTGGAGGAGAT...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTCTGCATCTTGAGCTCTaGGATCTGCGCCTGGAGGTC +
Preference number: 2 (lower is better)
Translates to: GPLPASSLLQLPGHVAFALHLEL*DLRLEV
Trigger: GACCTCCAGGCGCAGATCGCAGAGCTCAAGATGCAG...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTGGACTGCAGCTCCTaGACCTGCGCCTCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNLDCSS*TCASSF
Trigger: GAAGCTGGAGGCGCAGGTGCAGGAGCTGCAGTCCAA...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTGGTGGTGGTGGTGGTaGTTGAGACAGGGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDWWWWW*LRQGLC
Trigger: ACAGAGACCCTGTCTCAACCACCACCACCACCACCA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACGTCATCTTGGCCATCTaGTCCAGGCCCACGATGCGG +
Preference number: 2 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNVILAI*SRPTMR
Trigger: CCGCATCGTGGGCCTGGACCAGATGGCCAAGATGAC...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGGTTCCATTGAAGTCTaGGTCTCGAGTGTCCGTTTC +
Preference number: 2 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDGSIEV*VSSVRF
Trigger: GAAACGGACACTCGAGACGCAGACTTCAATGGAACC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
3UTR-3UTR GCA 90 bp CTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTGGTCTTCTTCCAGCACCCCATTaGACCGCAGCTGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: LFQLLKLILCLLLPLLGLLPAPH*TAAAPA
Trigger: TGCTGGAGCAGCTGCGGTGCAATGGGGTGCTGGAAG...AAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp CAAGGTCCAGCATCTGCTGGGCCATCTTCTTCCTTTCAGCCTGTAGCTGCTGGCTTCTCTGCCTTCTGCTaGCGCTCCTTGGTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: QGPASAGPSSSFQPVAAGFSAFC*RSLVFC
Trigger: GCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAA...GCCAGCAGCTACAGGCTGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACCGGGCCTCCATCTCATaGAGTATCTCCTCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LGLLQLMDVLAHVILGADRASIS*SISSSS
Trigger: GGAGCTGGAGGAGATACTGCATGAGATGGAGGCCCG...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTGGTGGTGGTGGTGGTaGTTGAGACAGGGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQWWWWW*LRQGLC
Trigger: ACAGAGACCCTGTCTCAACCACCACCACCACCACCA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGAATTCTCAAAGGCCTaGCGTGAGAAGTTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDEFSKA*REKLER
Trigger: CCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR TCA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATGCCCTGAGCTCCTGCTaGGTGGCTGTGCTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: KVLQLLLRVGELDVESGDALSSC*VAVLSS
Trigger: ACTGGACAGCACAGCCACTCAGCAGGAGCTCAGGGC...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTCATGTAAACAGAATTaGCAGGGACCGGTTACCGTG +
Preference number: 2 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSCKQN*QGPVTV
Trigger: CACGGTAACCGGTCCCTGGCAATTCTGTTTACATGA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTTTATGTTCCACCTCCTaGTTGGCCTGGCCCAGGACC +
Preference number: 2 (lower is better)
Translates to: NGLPLGLVKHPCDALNFILCSTS*LAWPRT
Trigger: GGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACATAA...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATCCCGCTCCCCATCGCTaGACTTGGACTGCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: KVLQLLLRVGELDVESGDPAPHR*TWTAAP
Trigger: AGGAGCTGCAGTCCAAGTGCAGCGATGGGGAGCGGG...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTACGTTGCCCAGGCTaGAGGGTGGTGGTTTTTATA +
Preference number: 2 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLRCPG*RVVVFI
Trigger: TATAAAAACCACCACCCTCCAGCCTGGGCAACGTAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CCA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATTGGGTGTCCTGGAGCTaGGAACTGAGGGACGCCACG +
Preference number: 2 (lower is better)
Translates to: KVLQLLLRVGELDVESGDWVSWS*ELRDAT
Trigger: CGTGGCGTCCCTCAGTTCCCAGCTCCAGGACACCCA...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCATGTAAACAGAATTaGCAGGGACCGGTTACCGTG +
Preference number: 2 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSCKQN*QGPVTV
Trigger: CACGGTAACCGGTCCCTGGCAATTCTGTTTACATGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTCCACTGTGCGGAACATaGCCTTCTTGGTCTTGGAGG +
Preference number: 2 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIPLCGT*PSWSWR
Trigger: CCTCCAAGACCAAGAAGGGCATGTTCCGCACAGTGG...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTACGTTGCCCAGGCTaGAGGGTGGTGGTTTTTATA +
Preference number: 2 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLRCPG*RVVVFI
Trigger: TATAAAAACCACCACCCTCCAGCCTGGGCAACGTAG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCTACGTTGCCCAGGCTaGAGGGTGGTGGTTTTTATA +
Preference number: 2 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLRCPG*RVVVFI
Trigger: TATAAAAACCACCACCCTCCAGCCTGGGCAACGTAG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTTGCCCAGGCTGGAGTaGAATGATGCAATTATAGCT +
Preference number: 2 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLPRLE*NDAIIA
Trigger: AGCTATAATTGCATCATTGCACTCCAGCCTGGGCAA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGGAATGAATTGGGAGTaGGGGCCGGCGGCACCCATT +
Preference number: 2 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVGMNWE*GPAAPI
Trigger: AATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR TCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTTGCAGGTTAGGGAATaGATTGGGAGTGGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVLQVRE*IGSGGR
Trigger: CCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR TCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACTCAAAGGCCTGACGTaGGAAGTTGGAAAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLKGLT*EVGKVC
Trigger: GCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCAGTCTGCTGGGTTTTaGTTTGTTCTGGGTTGTTGT +
Preference number: 2 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNQSAGF*FVLGCC
Trigger: ACAACAACCCAGAACAAAGCAAAACCCAGCAGACTG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGAAGTTGGAAAGGTTTaGAGGTTAGGGAATGAATTG +
Preference number: 2 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDEVGKV*RLGNEL
Trigger: CAATTCATTCCCTAACCTGCAAACCTTTCCAACTTC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGCACTTGGTGAACTGTaGGTGTCTGAGGTGTGGAAA +
Preference number: 2 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRALGEL*VSEVWK
Trigger: TTTCCACACCTCAGACACGCACAGTTCACCAAGTGC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGGTTCCATTGAAGTCTaGGTCTCGAGTGTCCGTTTC +
Preference number: 2 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRGSIEV*VSSVRF
Trigger: GAAACGGACACTCGAGACGCAGACTTCAATGGAACC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
3UTR-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCAGGCTGGAGGGTGGTaGTTTTTATATTCCTTGTGT +
Preference number: 2 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNQAGGW*FLYSLC
Trigger: ACACAAGGAATATAAAAACCACCACCCTCCAGCCTG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCAGGCTGGAGGGTGGTaGTTTTTATATTCCTTGTGT +
Preference number: 2 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQQAGGW*FLYSLC
Trigger: ACACAAGGAATATAAAAACCACCACCCTCCAGCCTG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGCCCAGGCTGGAGGGTaGTGGTTTTTATATTCCTTG +
Preference number: 2 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNAQAGG*WFLYSL
Trigger: CAAGGAATATAAAAACCACCACCCTCCAGCCTGGGC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACCTATCCTGTATAAGTTaGGGTCAAGTTCCAGGGCTT +
Preference number: 2 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNLSCIS*GQVPGL
Trigger: AAGCCCTGGAACTTGACCCCAACTTATACAGGATAG...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAAATTCTTGTATAGATaGGGTTTTACTACGTTGCCC +
Preference number: 2 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDKFLYR*GFTTLP
Trigger: GGGCAACGTAGTAAAACCTCATCTATACAAGAATTT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR TCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATTGCAGGTTAGGGAATaGATTGGGAGTGGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRELQVRE*IGSGGR
Trigger: CCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACCTCCTCAGAACCATCTaGATTTTCAATAACTCTACG +
Preference number: 2 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNLLRTI*IFNNST
Trigger: CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAG...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR GCA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATGGTTCCATTGAAGTCTaGGTCTCGAGTGTCCGTTTC +
Preference number: 2 (lower is better)
Translates to: KVLQLLLRVGELDVESGDGSIEV*VSSVRF
Trigger: GAAACGGACACTCGAGACGCAGACTTCAATGGAACC...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACAGGCTGGAGGGTGGTaGTTTTTATATTCCTTGTGT +
Preference number: 2 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRQAGGW*FLYSLC
Trigger: ACACAAGGAATATAAAAACCACCACCCTCCAGCCTG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGGTGGTGGTGGTGGTaGTTGAGACAGGGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCWWWWW*LRQGLC
Trigger: ACAGAGACCCTGTCTCAACCACCACCACCACCACCA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGTTTTCTTGCCGTGGTaGAAAACTGTAGAAAGTTGC +
Preference number: 2 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRVFLPW*KTVESC
Trigger: GCAACTTTCTACAGTTTTGCACCACGGCAAGAAAAC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCTCAAAGGCCTGACGTaGGAAGTTGGAAAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCLKGLT*EVGKVC
Trigger: GCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR TCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAAATTCTTGTATAGATaGGGTTTTACTACGTTGCCC +
Preference number: 2 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRKFLYR*GFTTLP
Trigger: GGGCAACGTAGTAAAACCTCATCTATACAAGAATTT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTGCCCAGGCTGGAGTaGAATGATGCAATTATAGCT +
Preference number: 2 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKLPRLE*NDAIIA
Trigger: AGCTATAATTGCATCATTGCACTCCAGCCTGGGCAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR TCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCCTTTTCAATTCATGTaGCTACAGAAGGCACTTGGT +
Preference number: 2 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVPFQFM*LQKALG
Trigger: ACCAAGTGCCTTCTGTAGTCACATGAATTGAAAAGG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACCTGACGTGAGAAGTTaGAAAGGTTTGCAGGTTAGG +
Preference number: 2 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREPDVRS*KGLQVR
Trigger: CCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGTTTTCTTGCCGTGGTaGAAAACTGTAGAAAGTTGC +
Preference number: 2 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCVFLPW*KTVESC
Trigger: GCAACTTTCTACAGTTTTGCACCACGGCAAGAAAAC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACAGTCTGCTGGGTTTTaGTTTGTTCTGGGTTGTTGT +
Preference number: 2 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREQSAGF*FVLGCC
Trigger: ACAACAACCCAGAACAAAGCAAAACCCAGCAGACTG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATTGCCCAGGCTGGAGTaGAATGATGCAATTATAGCT +
Preference number: 2 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRELPRLE*NDAIIA
Trigger: AGCTATAATTGCATCATTGCACTCCAGCCTGGGCAA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATAAGAAGATTTTGCTCTaGCCTATCCTGTATAAGTTG +
Preference number: 2 (lower is better)
Translates to: KVLQLLLRVGELDVESGDKKILL*PILYKL
Trigger: CAACTTATACAGGATAGGGCAGAGCAAAATCTTCTT...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGACCGGTTACCGTaGATATGTTTTTCTAAAAAC +
Preference number: 2 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVRDRLP*ICFSKN
Trigger: GTTTTTAGAAAAACATATCCACGGTAACCGGTCCCT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGTTTTCTTGCCGTGGTaGAAAACTGTAGAAAGTTGC +
Preference number: 2 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREVFLPW*KTVESC
Trigger: GCAACTTTCTACAGTTTTGCACCACGGCAAGAAAAC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGAAGTTGGAAAGGTTTaGAGGTTAGGGAATGAATTG +
Preference number: 2 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCEVGKV*RLGNEL
Trigger: CAATTCATTCCCTAACCTGCAAACCTTTCCAACTTC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCTCCTCAGAACCATCTaGATTTTCAATAACTCTACG +
Preference number: 2 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSLLRTI*IFNNST
Trigger: CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
3UTR-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTAGGGACCGGTTACCGTaGATATGTTTTTCTAAAAAC +
Preference number: 2 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCRDRLP*ICFSKN
Trigger: GTTTTTAGAAAAACATATCCACGGTAACCGGTCCCT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGAAGTTGGAAAGGTTTaGAGGTTAGGGAATGAATTG +
Preference number: 2 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREEVGKV*RLGNEL
Trigger: CAATTCATTCCCTAACCTGCAAACCTTTCCAACTTC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGGTTCCATTGAAGTCTaGGTCTCGAGTGTCCGTTTC +
Preference number: 2 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLGSIEV*VSSVRF
Trigger: GAAACGGACACTCGAGACGCAGACTTCAATGGAACC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
3UTR-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCTACGTTGCCCAGGCTaGAGGGTGGTGGTTTTTATA +
Preference number: 2 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLRCPG*RVVVFI
Trigger: TATAAAAACCACCACCCTCCAGCCTGGGCAACGTAG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCAGGCTGGAGGGTGGTaGTTTTTATATTCCTTGTGT +
Preference number: 2 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDQAGGW*FLYSLC
Trigger: ACACAAGGAATATAAAAACCACCACCCTCCAGCCTG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
3UTR CAA 90 bp GGTTTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTaGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGGTTTT +
Preference number: 2 (lower is better)
Translates to: GFYIPCVRGVCDIWN*RMDLDNAKYSLLGF
Trigger: AAAACCCAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
3UTR-3UTR TCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATAAATTCTTGTATAGATaGGGTTTTACTACGTTGCCC +
Preference number: 2 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDKFLYR*GFTTLP
Trigger: GGGCAACGTAGTAAAACCTCATCTATACAAGAATTT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGAAAACTGTAGAAAGTTaGTTATTCACTGGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLKTVES*LFTGLG
Trigger: ACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
3UTR TCA 72 bp TCTGGGCCGTGCTGCGCTCTGTGGCCAGCTCGTTGCTaGGCTGCTCGGCCTGCTGTGTGGCTTTGCGGACCC +
Preference number: 3 (lower is better)
Translates to: SGPCCALWPARC*AARPAVWLCGP
Trigger: GGGTCCGCAAAGCCACACAGCAGGCCGAGCAGCTCAGCAACGAGCTGGCCACAGAGCGCAGCACGGCCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCCTCGTCCAGCTGGTCTaGCAGGCTGTTCCGCTCCTC +
Preference number: 3 (lower is better)
Translates to: RCSFLRLALMRWDSSSASLVQLV*QAVPLL
Trigger: GAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGAG...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 72 bp GGCCTGGCCCAGGACCCGCAGCTCCCCGGCCAGGTCTaGGTTCTCTTTCTCCAGCGTCTGCTTATTCTTGTC +
Preference number: 3 (lower is better)
Translates to: GLAQDPQLPGQV*VLFLQRLLILV
Trigger: GACAAGAATAAGCAGACGCTGGAGAAAGAGAACGCAGACCTGGCCGGGGAGCTGCGGGTCCTGGGCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTAGGGACGCCACGTCCTaGGCCAGCTTAATGGCCTTC +
Preference number: 3 (lower is better)
Translates to: ASSRARARDRALVSFSLARDATS*ASLMAF
Trigger: GAAGGCCATTAAGCTGGCCAAGGACGTGGCGTCCCT...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTCAGGATCTCGTAGCGTaGGCGGAACTCCTGGAAGAC +
Preference number: 3 (lower is better)
Translates to: ASSRARARDRALVSFSLAQDLVA*AELLED
Trigger: GTCTTCCAGGAGTTCCGCCAACGCTACGAGATCCTG...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 72 bp ATCTGCTGGGCCATCTTCTTCCTTTCAGCCTGTAGCTaGTGGCCCCTGTCTTCCTCCTCCTCCAGGCGGGCC +
Preference number: 3 (lower is better)
Translates to: ICWAIFFLSACS*WPLSSSSSRRA
Trigger: GGCCCGCCTGGAGGAGGAGGAAGACAGGGGCCAGCAGCTACAGGCTGAAAGGAAGAAGATGGCCCAGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 72 bp CCTCTGCCAGTTCCTCCTTCTCGAGGTCCGCTTGTTTaGGAGCCCTCTCAGCGGCGGCGAGGTCCTCTTGTA +
Preference number: 3 (lower is better)
Translates to: PLPVPPSRGPLV*EPSQRRRGPLV
Trigger: TACAAGAGGACCTCGCCGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCGAGAAGGAGGAACTGGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 72 bp TGCGTTCCTTCCCGACAGGCTACTGGCCAGCTCCTCTaGCAGTTCCTCCTTCTCGAGGTCCGCTTGTTTGCG +
Preference number: 3 (lower is better)
Translates to: CVPSRQATGQLL*QFLLLEVRLFA
Trigger: CGCAAACAAGCGGACCTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAAGGAACGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 72 bp AGAGGTCTCGTTTCCTCGCCTGAGCTTGCTCTTGAGTaGGTTCACCTCGCGGCCCATGGCCTCGTTGCTCTC +
Preference number: 3 (lower is better)
Translates to: RGLVSSPELALE*VHLAAHGLVAL
Trigger: GAGAGCAACGAGGCCATGGGCCGCGAGGTGAACGCACTCAAGAGCAAGCTCAGGCGAGGAAACGAGACCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR CCA 72 bp TCTCGTCCTGGAGTGCGTTCCTTCCCGACAGGCTACTaGCCAGCTCCTCTGCCAGTTCCTCCTTCTCGAGGT +
Preference number: 3 (lower is better)
Translates to: SRPGVRSFPTGY*PAPLPVPPSRG
Trigger: ACCTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAAGGAACGCACTCCAGGACGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTAGCTTCGTAGACACGTaGAGCTTCTGCCGGGTTTCT +
Preference number: 3 (lower is better)
Translates to: ASSRARARDRALVSFSLASFVDT*SFCRVS
Trigger: AGAAACCCGGCAGAAGCTCAACGTGTCTACGAAGCT...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 72 bp GCTTGGAGATCCCTTTCGAACTGGCCCTTGAGCGCCTaGATGTTGACTTCCAGCCGCAGTTTGGCGTCCTCC +
Preference number: 3 (lower is better)
Translates to: AWRSLSNWPLSA*MLTSSRSLASS
Trigger: GGAGGACGCCAAACTGCGGCTGGAAGTCAACATGCAGGCGCTCAAGGGCCAGTTCGAAAGGGATCTCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACATGCCCTTCTTGGTCTaGGAGGCGCTGGGCAGCGAG +
Preference number: 3 (lower is better)
Translates to: LGLLQLMDVLAHVILGADMPFLV*EALGSE
Trigger: CTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCAT...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACAGGAACGCATCCAGCTaGCCGGACCTCTTCTCGTGG +
Preference number: 3 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNRNASS*PDLFSW
Trigger: CCACGAGAAGAGGTCCGGCAAGCTGGATGCGTTCCT...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACTCCCCATCGCTGCACTaGGACTGCAGCTCCTGCACC +
Preference number: 3 (lower is better)
Translates to: LGLLQLMDVLAHVILGADSPSLH*DCSSCT
Trigger: GGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGGA...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTTGCAGCTTGTGGACTTaGTCATTGAGCTCCGCCCGG +
Preference number: 3 (lower is better)
Translates to: GPLPASSLLQLPGHVAFACSLWT*SLSSAR
Trigger: CCGGGCGGAGCTCAATGACAAAGTCCACAAGCTGCA...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 72 bp TGGATGTTGAGAGTGGAGATGTGGCGCTCCAGGTTCTaGTTGGCCTCCATCTCCTCGTCCAGCTGGTCTTGC +
Preference number: 3 (lower is better)
Translates to: WMLRVEMWRSRF*LASISSSSWSC
Trigger: GCAAGACCAGCTGGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGCGCCACATCTCCACTCTCAACATCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTGCTGGGTTTTGCTTaGTTCTGGGTTGTTGTTGGG +
Preference number: 3 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLLGFA*FWVVVG
Trigger: CCCAACAACAACCCAGAACAAAGCAAAACCCAGCAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CAA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCAGCTTGGTAAGATTCTaGGCCTTTTCTTCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: RCSFLRLALMRWDSSSASSLVRF*AFSSSS
Trigger: AGAAGAGGAAGAAAAGGCCAAGAATCTTACCAAGCT...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR TCA 72 bp GACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATaGATTGGGAGTGGGGGCCGGCGGCACCCATTTCGG +
Preference number: 3 (lower is better)
Translates to: DVRSWKGLQVRE*IGSGGRRHPFR
Trigger: CCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR GCA 72 bp TCCCCGGCCAGGTCTGCGTTCTCTTTCTCCAGCGTCTaGTTATTCTTGTCTAGGTTCGCCTTGGCCCTCTTG +
Preference number: 3 (lower is better)
Translates to: SPARSAFSFSSV*LFLSRFALALL
Trigger: CAAGAGGGCCAAGGCGAACCTAGACAAGAATAAGCAGACGCTGGAGAAAGAGAACGCAGACCTGGCCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 72 bp CCCTCTTCCAGAGCTTCCACGGTGCTGGCAAAGTCCTaGAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTG +
Preference number: 3 (lower is better)
Translates to: PSSRASTVLAKS*SFFFESESWML
Trigger: CAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTTGCCAGCACCGTGGAAGCTCTGGAAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTGCTGGGTTTTGCTTaGTTCTGGGTTGTTGTTGGG +
Preference number: 3 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLLGFA*FWVVVG
Trigger: CCCAACAACAACCCAGAACAAAGCAAAACCCAGCAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR GCA 72 bp TCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTaGTTTCGCTCGTCTTCCAGTTCCGTCTCATACTCG +
Preference number: 3 (lower is better)
Translates to: SSFFFAAAARAR*FRSSSSSVSYS
Trigger: CGAGTATGAGACGGAACTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATATGCAGCGCACGAAGTaGGGCGTGGTGTTGCGTAGC +
Preference number: 3 (lower is better)
Translates to: KVLQLLLRVGELDVESGDMQRTK*GVVLRS
Trigger: GCTACGCAACACCACGCCCAACTTCGTGCGCTGCAT...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR TCA 72 bp CCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTaGCTACAGAAGGCACTTGGTGAACTGTGCGTGTCT +
Preference number: 3 (lower is better)
Translates to: PSVGAASPFQFM*LQKALGELCVS
Trigger: AGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR GCA 72 bp TGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTaGCGCTCCTTGGTCTTCTGCAGTTCATCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: CSSSLSSFSAFC*RSLVFCSSSSL
Trigger: CAAGGAGGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 72 bp TTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTaGTGCCGCTCCTTGGTCTTCTGCAGTTCATCCTCC +
Preference number: 3 (lower is better)
Translates to: FCSSSLSSFSAF*CRSLVFCSSSS
Trigger: GGAGGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTGCTTATTCACTGGCCTaGGTTCCATTGAAGTCTGCG +
Preference number: 3 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIAYSLA*VPLKSA
Trigger: CGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGC...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp CTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTGGTCTTTCAAGTTCCAGGGCTTaGATCATGAGAATGCAGGCC +
Preference number: 3 (lower is better)
Translates to: LFQLLKLILCLLLPLLGLSSSRA*IMRMQA
Trigger: GGCCTGCATTCTCATGATCAAAGCCCTGGAACTTGA...AAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCAAAACTGTAGAAAGTaGCTTATTCACTGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNQNCRK*LIHWPW
Trigger: CCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
3UTR-3UTR CAA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATTCATCCTCCAGTTTCTaGATCTTGGCCTCAGCCGTG +
Preference number: 3 (lower is better)
Translates to: KVLQLLLRVGELDVESGDSSSSF*ILASAV
Trigger: CACGGCTGAGGCCAAGATCAAGAAACTGGAGGATGA...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR GCA 72 bp AGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTaGGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATC +
Preference number: 3 (lower is better)
Translates to: SCLFTGLGSIEV*VSSVRFLLRTI
Trigger: GATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
3UTR GCA 72 bp AATTTCCTCTGCTTCTTTTCCAGGTTGGACACGAGTTaGCGCTGGTTGTCCAAATCAACAACCAGGTCGTCC +
Preference number: 3 (lower is better)
Translates to: NFLCFFSRLDTS*RWLSKSTTRSS
Trigger: GGACGACCTGGTTGTTGATTTGGACAACCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGCAGAGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGCTTATTCACTGGCCTaGGTTCCATTGAAGTCTGCG +
Preference number: 3 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVAYSLA*VPLKSA
Trigger: CGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
3UTR TCA 72 bp CCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTaGGAAGTTGGAAAGGTTTGCAGGTTAGGGAATGAA +
Preference number: 3 (lower is better)
Translates to: PGEGERILKGLT*EVGKVCRLGNE
Trigger: TTCATTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR TCA 72 bp TGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTaGAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAG +
Preference number: 3 (lower is better)
Translates to: CRKLLIHWPWFH*SLRLECPFPPQ
Trigger: CTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
3UTR CCA 72 bp CTTCTGCCTCAGCTCTGTCCCTCTCATCCGCGTATTTaGAAGAGATGTTTTTCTCCTCGGCTAACAACTGAT +
Preference number: 3 (lower is better)
Translates to: LLPQLCPSHPRI*KRCFSPRLTTD
Trigger: ATCAGTTGTTAGCCGAGGAGAAAAACATCTCTTCCAAATACGCGGATGAGAGGGACAGAGCTGAGGCAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAACAGTCTGCTGGGTTTaGCTTTGTTCTGGGTTGTTG +
Preference number: 3 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKTVCWV*LCSGLL
Trigger: CAACAACCCAGAACAAAGCAAAACCCAGCAGACTGT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAACTTCAATTTTTACCTaGAATACAGGGGTAGTAGGG +
Preference number: 3 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRTSIFT*NTGVVG
Trigger: CCCTACTACCCCTGTATTCAAGGTAAAAATTGAAGT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGACTACAGAAGGCACTaGGTGAACTGTGCGTGTCTG +
Preference number: 3 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREDYRRH*VNCACL
Trigger: CAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CAA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATACTTCATTCTGCAGCTaGTGGACTTTGTCATTGAGC +
Preference number: 3 (lower is better)
Translates to: KVLQLLLRVGELDVESGDTSFCS*WTLSLS
Trigger: GCTCAATGACAAAGTCCACAAGCTGCAGAATGAAGT...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTGTCTGCACAATCCATaGATAGAACTGGAGGATGTG +
Preference number: 3 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVCLHNP*IELEDV
Trigger: CACATCCTCCAGTTCTATCAATGGATTGTGCAGACA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCCTGCTGGGTTTTGCTTaGTTCTGGGTTGTTGTTGGG +
Preference number: 3 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVLLGFA*FWVVVG
Trigger: CCCAACAACAACCCAGAACAAAGCAAAACCCAGCAG...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
3UTR-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTACTTCAATTTTTACCTaGAATACAGGGGTAGTAGGG +
Preference number: 3 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVTSIFT*NTGVVG
Trigger: CCCTACTACCCCTGTATTCAAGGTAAAAATTGAAGT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAACTTCAATTTTTACCTaGAATACAGGGGTAGTAGGG +
Preference number: 3 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKTSIFT*NTGVVG
Trigger: CCCTACTACCCCTGTATTCAAGGTAAAAATTGAAGT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR GCA 72 bp TTGGTTTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTaGTTATTCACTGGCCTTGGTTCCATTGAAGTCTGC +
Preference number: 3 (lower is better)
Translates to: LVFLPWCKTVES*LFTGLGSIEVC
Trigger: GCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
3UTR-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCTGCTGGGTTTTGCTTaGTTCTGGGTTGTTGTTGGG +
Preference number: 3 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLLGFA*FWVVVG
Trigger: CCCAACAACAACCCAGAACAAAGCAAAACCCAGCAG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR CCA 72 bp TTTCATGTAAACAGAATTGCCAGGGACCGGTTACCGTaGATATGTTTTTCTAAAAACTCAGTGTCTGCACAA +
Preference number: 3 (lower is better)
Translates to: FHVNRIARDRLP*ICFSKNSVSAQ
Trigger: TTGTGCAGACACTGAGTTTTTAGAAAAACATATCCACGGTAACCGGTCCCTGGCAATTCTGTTTACATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCCAGGGCCAGCACACCTaGAGGGTTGTTCGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: RCSFLRLALMRWDSSSASQGQHT*RVVRSL
Trigger: GAGCGACCGAACAACCCTCCAGGTGTGCTGGCCCTG...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR CAA 72 bp CAGCTCCTCTGCCAGTTCCTCCTTCTCGAGGTCCGCTaGTTTGCGAGCCCTCTCAGCGGCGGCGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QLLCQFLLLEVR*FASPLSGGEVL
Trigger: GAGGACCTCGCCGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCGAGAAGGAGGAACTGGCAGAGGAGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCCTGGCGGCCCGCTCTaGGTCCAGGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTPGGPL*VQVLLE
Trigger: CTCCAGGAGGACCTGGACTCAGAGCGGGCCGCCAGG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTCCTGCTGTGTGGCTTTaGGGACCCGGTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: ASSRARARDRALVSFSLAPAVWL*GPGRSW
Trigger: CCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGG...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGTGGTCTTGGAGGCGCTaGGCAGCGAGCTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQWSWRR*AASSPS
Trigger: TGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACCA...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGTGGGTGTCCTGGAGCTaGGAACTGAGGGACGCCACG +
Preference number: 4 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQWVSWS*ELRDAT
Trigger: CGTGGCGTCCCTCAGTTCCCAGCTCCAGGACACCCA...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTAGCTCCTCCTCCAGCTaGGCGATCCGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SARSWAWCCVAWSSACPASSSSS*AIRASR
Trigger: CCTGGAGGCCCGGATCGCCCAGCTGGAGGAGGAGCT...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCCTGGCGGCCCGCTCTaGGTCCAGGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQPGGPL*VQVLLE
Trigger: CTCCAGGAGGACCTGGACTCAGAGCGGGCCGCCAGG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTGGCCAGCTCGTTGCTaGGCTGCTCGGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDWPARC*AARPAV
Trigger: CACAGCAGGCCGAGCAGCTCAGCAACGAGCTGGCCA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCACTGGCCAGCTCCTCTaGCAGTTCCTCCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: RCSFLRLALMRWDSSSASTGQLL*QFLLLE
Trigger: CTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGT...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp CTTGTGGACTTTGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCGCTGCACTTGGCCCATGGCCTCGTTaGTCTCCGTGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LVDFVIELRPGPLPIAALGPWPR*SPWPHP
Trigger: TGGATGAGGCCACGGAGAGCAACGAGGCCATGGGCC...AAGTGCAGCGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCAGCTCTCCGTCATCTTaGCCATCTGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RCSFLRLALMRWDSSSASSSPSS*PSGPGP
Trigger: TGGGCCTGGACCAGATGGCCAAGATGACGGAGAGCT...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGGCTCGTGGAAGTCGCTaGCATCACCCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQARGSR*HHPPAS
Trigger: GGAAGCTGGAGGGTGATGCCAGCGACTTCCACGAGC...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTGGCGAGCTCGGATCTaGCGCACCTCCCAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQWRARI*RTSQAG
Trigger: TCCGGCCTGGGAGGTGCGTCAGATCCGAGCTCGCCA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300036.6
ENST00000452625.7
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCCCTGAGCTCCTGCTaGGTGGCTGTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDALSSC*VAVLSS
Trigger: ACTGGACAGCACAGCCACTCAGCAGGAGCTCAGGGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCTCAAGCTGCTCTGTaGGCTCCTCCACCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDAQAAL*APPPPV
Trigger: CACAGGCGGTGGAGGAGCTCACAGAGCAGCTTGAGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTCCCGATCTTGAAGCATaGTCCGGTAGGCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ASSRARARDRALVSFSLAPDLEA*SGRPCL
Trigger: CAGACACGGCCTACCGGAGCATGCTTCAAGATCGGG...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTGGGGTGGCTGCCCTaGTCCGTGCACAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLGWLP*SVHSFS
Trigger: GGAGAAGCTGTGCACGGAGCAGGGCAGCCACCCCAA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTATCAGCTTGCCCAGCTaGTCCTTGTACAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ASSRARARDRALVSFSLAISLPS*SLYSCP
Trigger: GGGGCAGCTGTACAAGGAGCAGCTGGGCAAGCTGAT...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACATCTCCTCCAGCTCCTaGTTCTTGGCCGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDISSSS*FLAASR
Trigger: GCGGCTGGCGGCCAAGAAGCAGGAGCTGGAGGAGAT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGCTTTCAGCCTGTAGCTaGTGGCCCCTGTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQLSACS*WPLSSS
Trigger: GGAGGAAGACAGGGGCCAGCAGCTACAGGCTGAAAG...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGTTGAGCTCTGCGATCTaGGCCTGGAGGTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQLSSAI*AWRSAI
Trigger: GATCGCTGACCTCCAGGCGCAGATCGCAGAGCTCAA...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGCTGCATCTTGAGCTCTaGGATCTGCGCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQLHLEL*DLRLEV
Trigger: GACCTCCAGGCGCAGATCGCAGAGCTCAAGATGCAG...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp CTTGTGGACTTTGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCGCTGCACTTTTGGACTGCAGCTCCTaGACCTGCGCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LVDFVIELRPGPLPIAALLDCSS*TCASSF
Trigger: GAAGCTGGAGGCGCAGGTGCAGGAGCTGCAGTCCAA...AAGTGCAGCGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTCGCTGCACTTGGACTaGAGCTCCTGCACCTGCGCC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSLHLD*SSCTCA
Trigger: GGCGCAGGTGCAGGAGCTGCAGTCCAAGTGCAGCGA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTTCGCTGCACTTGGACTaGAGCTCCTGCACCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SARSWAWCCVAWSSACPASLHLD*SSCTCA
Trigger: GGCGCAGGTGCAGGAGCTGCAGTCCAAGTGCAGCGA...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCGAGGTCCGCTTGTTTaGGAGCCCTCTCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTRGPLV*EPSQRR
Trigger: CCGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTGAGCTGCTCGGCCTaGTGTGTGGCTTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLSCSA*CVALRT
Trigger: GGTCCGCAAAGCCACACAGCAGGCCGAGCAGCTCAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCAGCTGCCTCTTGAGCTaGTTGACCCTGGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: RCSFLRLALMRWDSSSASSCLLS*LTLALP
Trigger: AGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCAGCT...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTCATCCAGCTCCCGCTaGAGCTTCCTGCGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSSSSR*SFLRLA
Trigger: CGCCAACCGCAGGAAGCTGCAGCGGGAGCTGGATGA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCAGGGCCAGCACACCTaGAGGGTTGTTCGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDQGQHT*RVVRSL
Trigger: GAGCGACCGAACAACCCTCCAGGTGTGCTGGCCCTG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTGCCCTTCTTGGTCTTaGAGGCGCTGGGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDCPSWS*RRWAAS
Trigger: GCTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTTTTCAGCCTTGTTCCTaGCGGCCCGCTCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ASSRARARDRALVSFSLAFQPCS*RPALSP
Trigger: TGGACTCAGAGCGGGCCGCCAGGAACAAGGCTGAAA...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACACCTCCTGCTTGGCCTaGCCCAGGACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNTSCLA*PRTRSS
Trigger: GGAGCTGCGGGTCCTGGGCCAGGCCAAGCAGGAGGT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CTTGTGGACTTTGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCGCTGCACTTCCCCATCGCTGCACTTaGACTGCAGCTCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: LVDFVIELRPGPLPIAALPHRCT*TAAPAP
Trigger: AGGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGG...AAGTGCAGCGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTGGGTGTCCTGGAGCTaGGAACTGAGGGACGCCACG +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDWVSWS*ELRDAT
Trigger: CGTGGCGTCCCTCAGTTCCCAGCTCCAGGACACCCA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTCGGCGCTTCTCGTCCTaGAGTGCGTTCCTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: SARSWAWCCVAWSSACPARRFSS*SAFLPD
Trigger: GTCGGGAAGGAACGCACTCCAGGACGAGAAGCGCCG...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTCCTCCTCCAGCTaGGCGATCCGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSSSSS*AIRASR
Trigger: CCTGGAGGCCCGGATCGCCCAGCTGGAGGAGGAGCT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCACCTCGCGGCCCATaGCCTCGTTGCTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSPRGP*PRCSPW
Trigger: CCACGGAGAGCAACGAGGCCATGGGCCGCGAGGTGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTTCACCTCGCGGCCCATaGCCTCGTTGCTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: GPLPASSLLQLPGHVAFASPRGP*PRCSPW
Trigger: CCACGGAGAGCAACGAGGCCATGGGCCGCGAGGTGA...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR CAA 72 bp GTGTCCTGGAGCTGGGAACTGAGGGACGCCACGTCCTaGGCCAGCTTAATGGCCTTCCCCTCGGCCTCGTTA +
Preference number: 4 (lower is better)
Translates to: VSWSWELRDATS*ASLMAFPSASL
Trigger: TAACGAGGCCGAGGGGAAGGCCATTAAGCTGGCCAAGGACGTGGCGTCCCTCAGTTCCCAGCTCCAGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR CAA 72 bp TCCTCTGCCAGTTCCTCCTTCTCGAGGTCCGCTTGTTaGCGAGCCCTCTCAGCGGCGGCGAGGTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: SSASSSFSRSAC*RALSAAARSSC
Trigger: ACAAGAGGACCTCGCCGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCGAGAAGGAGGAACTGGCAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACTGGCGAGCTCGGATCTaGCGCACCTCCCAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LGLLQLMDVLAHVILGADWRARI*RTSQAG
Trigger: TCCGGCCTGGGAGGTGCGTCAGATCCGAGCTCGCCA...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCCTGCGGTTGGCGTTaGTGCGCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSCGWR*CAGTPP
Trigger: AGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCTGGCCTTGGTTCCATTaGAGTCTGCGTCTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: RCSFLRLALMRWDSSSASWPWFH*SLRLEC
Trigger: ACACTCGAGACGCAGACTTCAATGGAACCAAGGCCA...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCGCTGAAACCCATGATTaGCATGGCCTCCACGGTTTC +
Preference number: 4 (lower is better)
Translates to: RCSFLRLALMRWDSSSASAETHD*HGLHGF
Trigger: GAAACCGTGGAGGCCATGGCAATCATGGGTTTCAGC...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTTGGGGTGGCTGCCCTaGTCCGTGCACAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLGWLP*SVHSFS
Trigger: GGAGAAGCTGTGCACGGAGCAGGGCAGCCACCCCAA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGCCACTGTGCGGAACATaGCCTTCTTGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQPLCGT*PSWSWR
Trigger: CCTCCAAGACCAAGAAGGGCATGTTCCGCACAGTGG...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGTTCTCTGCCTTCTGCTaGCGCTCCTTGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQFSAFC*RSLVFC
Trigger: GCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAA...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTGGACTGCAGCTCCTaGACCTGCGCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLDCSS*TCASSF
Trigger: GAAGCTGGAGGCGCAGGTGCAGGAGCTGCAGTCCAA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCGCTGCACTTGGACTaGAGCTCCTGCACCTGCGCC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSLHLD*SSCTCA
Trigger: GGCGCAGGTGCAGGAGCTGCAGTCCAAGTGCAGCGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCCTGCTGTGTGGCTTTaGGGACCCGGTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTPAVWL*GPGRSW
Trigger: CCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTGAGCTGCTCGGCCTaGTGTGTGGCTTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLSCSA*CVALRT
Trigger: GGTCCGCAAAGCCACACAGCAGGCCGAGCAGCTCAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAGCTCGTTGCTGAGCTaGTCGGCCTGCTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSSLLS*SACCVA
Trigger: AGCCACACAGCAGGCCGAGCAGCTCAGCAACGAGCT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTGCCGCTCGAGCTGCTaGCGGGCACTCTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDCRSSC*RALSFF
Trigger: GAAGAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTCTGCCGCTCGAGCTaGTGCCGGGCACTCTCATTC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDFCRSS*CRALSF
Trigger: GAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCAGAA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGGCCCTTCTGCGCCATaGTGCCTTGTTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDGPSAP*CLVGPR
Trigger: TCTGGGACCAACAAGGCACCATGGCGCAGAAGGGCC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGCGGCCCAGTCAGCCTaGGCCACTGGGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNAAQSA*ATGLLM
Trigger: CATCAACAGCCCAGTGGCCCAGGCTGACTGGGCCGC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTGCGGCCCAGTCAGCCTaGGCCACTGGGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPAAQSA*ATGLLM
Trigger: CATCAACAGCCCAGTGGCCCAGGCTGACTGGGCCGC...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTCTTTCTTGCCCTTGTaGGAGGAGGCCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSFLPL*EEATTA
Trigger: GGCCGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCTCGTGGAAGTCGCTaGCATCACCCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDARGSR*HHPPAS
Trigger: GGAAGCTGGAGGGTGATGCCAGCGACTTCCACGAGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGAGTCCAGGTCCTCCTaGAGGTCTGAGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDESRSS*RSEMWP
Trigger: GGGCCACATCTCAGACCTCCAGGAGGACCTGGACTC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CTTGTGGACTTTGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCGCTGCACTTTGCTCGTCCCGGGCTTaGAGATCCCTTTCGAACTGG +
Preference number: 4 (lower is better)
Translates to: LVDFVIELRPGPLPIAALCSSRA*RSLSNW
Trigger: CCAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCA...AAGTGCAGCGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTGCCCCCTCCATCTCGTaGAGCTTGCTCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPAPSIS*SLLRSS
Trigger: GGAGCTCCGGAGCAAGCTCCACGAGATGGAGGGGGC...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCACCTCGCGGCCCATaGCCTCGTTGCTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSPRGP*PRCSPW
Trigger: CCACGGAGAGCAACGAGGCCATGGGCCGCGAGGTGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGGAATGAATTGGGAGTaGGGGCCGGCGGCACCCATT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDGMNWE*GPAAPI
Trigger: AATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGCCCTGAGCTCCTGCTaGGTGGCTGTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNALSSC*VAVLSS
Trigger: ACTGGACAGCACAGCCACTCAGCAGGAGCTCAGGGC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCGGAGAGCTGGATGTTaGGAGTGGAGATGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDRRAGC*EWRCGA
Trigger: AGCGCCACATCTCCACTCTCAACATCCAGCTCTCCG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGTTTGCGTAGCTGCTTaGTGGCTTCCTCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDVCVAA*WLPPSP
Trigger: AGGGGAGGGAGGAAGCCATCAAGCAGCTACGCAAAC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTCATCATCCTGGGCTaGTGGGATGGGCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLIILG*WDGHKA
Trigger: GGCTTTGTGCCCATCCCAGCAGCCCAGGATGATGAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAGGAAGGAAGCCCCTTaGCGATGGGTCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDRKEAP*RWVLSR
Trigger: CCTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTTTGGGGTGGCTGCCCTaGTCCGTGCACAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPLGWLP*SVHSFS
Trigger: GGAGAAGCTGTGCACGGAGCAGGGCAGCCACCCCAA...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCCGGCAGATGCGAATaGCTTCCAGCACCCCATTGC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTAGRCE*LPAPHC
Trigger: GCAATGGGGTGCTGGAAGGCATTCGCATCTGCCGGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACATGGCGGTCAGCTGCTaGTGCCTCTTGGCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDMAVSC*CLLAKA
Trigger: GGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGCCAT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGATCTCCTCCAGCTCCTaGTTCTTGGCCGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQISSSS*FLAASR
Trigger: GCGGCTGGCGGCCAAGAAGCAGGAGCTGGAGGAGAT...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CAAGGTCCAGCATCTGCTGGGCCATCTTCTTCCTTTCAGCCTGTAGCTGCTGGCATCTCCTCCAGCTCCTaGTTCTTGGCCGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QGPASAGPSSSFQPVAAGISSSS*FLAASR
Trigger: GCGGCTGGCGGCCAAGAAGCAGGAGCTGGAGGAGAT...GCCAGCAGCTACAGGCTGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTCGGGCCTCCATCTCATaGAGTATCTCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SARSWAWCCVAWSSACPARASIS*SISSSS
Trigger: GGAGCTGGAGGAGATACTGCATGAGATGGAGGCCCG...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTGCATCTTGAGCTCTaGGATCTGCGCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLHLEL*DLRLEV
Trigger: GACCTCCAGGCGCAGATCGCAGAGCTCAAGATGCAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTCCCCGGCCAGGTCTaGGTTCTCTTTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLPGQV*VLFLQR
Trigger: ACGCTGGAGAAAGAGAACGCAGACCTGGCCGGGGAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTTTATGTTCCACCTCCTaGTTGGCCTGGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: SARSWAWCCVAWSSACPALCSTS*LAWPRT
Trigger: GGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACATAA...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCCCGCTCCCCATCGCTaGACTTGGACTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNPAPHR*TWTAAP
Trigger: AGGAGCTGCAGTCCAAGTGCAGCGATGGGGAGCGGG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCGTCCAGCTGGTCTTaGAGGCTGTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSSSWS*RLFRSS
Trigger: GGAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCCAGAGCTTCCACGGTaGTGGCAAAGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDPELPR*WQSPAA
Trigger: AGCTGCAGGACTTTGCCAGCACCGTGGAAGCTCTGG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCTGCCAGGGCACGTTaGTTTCGCTCGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDAARAR*FRSSSS
Trigger: ACTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCTGAGCTGCTCGGCCTaGTGTGTGGCTTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLSCSA*CVALRT
Trigger: GGTCCGCAAAGCCACACAGCAGGCCGAGCAGCTCAG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTTCTGCCGCTCGAGCTaGTGCCGGGCACTCTCATTC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTFCRSS*CRALSF
Trigger: GAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCAGAA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCCTCCTGCTCGACCTaGTCCTCCAGCTGTGCAATC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTASCST*SSSCAI
Trigger: GATTGCACAGCTGGAGGAGCAGGTCGAGCAGGAGGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCCTGCTCCTTGTACTaGTCGGCCATCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTACSLY*SAILRS
Trigger: CGAGCGCAAGATGGCCGAGCAGTACAAGGAGCAGGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTTGTGGACTTTGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCGCTGCACTTTTGCCTTTCTCTGCCTaGTCCTTGTACTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LVDFVIELRPGPLPIAALLPFSA*SLYCSA
Trigger: GGCCGAGCAGTACAAGGAGCAGGCAGAGAAAGGCAA...AAGTGCAGCGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCATCCAGCTCCCGCTaGAGCTTCCTGCGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSSSSR*SFLRLA
Trigger: CGCCAACCGCAGGAAGCTGCAGCGGGAGCTGGATGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGGCCCATGGCCTCGTTaGTCTCCGTGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQGPWPR*SPWPHP
Trigger: TGGATGAGGCCACGGAGAGCAACGAGGCCATGGGCC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCAGGGCCAGCACACCTaGAGGGTTGTTCGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNQGQHT*RVVRSL
Trigger: GAGCGACCGAACAACCCTCCAGGTGTGCTGGCCCTG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTGTCATCTTGGCCATCTaGTCCAGGCCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: GPLPASSLLQLPGHVAFAVILAI*SRPTMR
Trigger: CCGCATCGTGGGCCTGGACCAGATGGCCAAGATGAC...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAGCTCTCCGTCATCTTaGCCATCTGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSSPSS*PSGPGP
Trigger: TGGGCCTGGACCAGATGGCCAAGATGACGGAGAGCT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTGCCCTTCTTGGTCTTaGAGGCGCTGGGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNCPSWS*RRWAAS
Trigger: GCTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCACGAAGTTGGGCGTaGTGTTGCGTAGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDARSWA*CCVAWS
Trigger: TGACCACGCTACGCAACACCACGCCCAACTTCGTGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTGCAGCGCACGAAGTTaGGCGTGGTGTTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTCSARS*AWCCVA
Trigger: CGCTACGCAACACCACGCCCAACTTCGTGCGCTGCA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCTCGTGGAAGTCGCTaGCATCACCCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTARGSR*HHPPAS
Trigger: GGAAGCTGGAGGGTGATGCCAGCGACTTCCACGAGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTTCAGCGATCTGCTCGTaGAAGTCGCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: SARSWAWCCVAWSSACPASAICS*KSLASP
Trigger: GGGTGATGCCAGCGACTTCCACGAGCAGATCGCTGA...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCTGCGATCTGCGCCTaGAGGTCAGCGATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSAICA*RSAICS
Trigger: CGAGCAGATCGCTGACCTCCAGGCGCAGATCGCAGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTGAGTCCAGGTCCTCCTaGAGGTCTGAGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GPLPASSLLQLPGHVAFAESRSS*RSEMWP
Trigger: GGGCCACATCTCAGACCTCCAGGAGGACCTGGACTC...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACATCTCCTCGTCCAGCTaGTCTTGCAGGCTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDISSSS*SCRLFR
Trigger: GCGGAACAGCCTGCAAGACCAGCTGGACGAGGAGAT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCGACACGAGTTGCCGCTaGTTGTCCAAATCAACAACC +
Preference number: 4 (lower is better)
Translates to: RCSFLRLALMRWDSSSASDTSCR*LSKSTT
Trigger: GGTTGTTGATTTGGACAACCAGCGGCAACTCGTGTC...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTTCCAGCCGCAGTTTaGCGTCCTCCGTGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLPAAV*RPPWLA
Trigger: TGCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTCCCGACAGGCTACTaGCCAGCTCCTCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDFPTGY*PAPLPV
Trigger: AACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCGGCGCTTCTCGTCCTaGAGTGCGTTCCTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQRRFSS*SAFLPD
Trigger: GTCGGGAAGGAACGCACTCCAGGACGAGAAGCGCCG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATAGCTCCTCCTCCAGCTaGGCGATCCGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSSSSS*AIRASR
Trigger: CCTGGAGGCCCGGATCGCCCAGCTGGAGGAGGAGCT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAGCTCGGCCTGCTGTGTaGCTTTGCGGACCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEARPAV*LCGPGR
Trigger: GCGACCGGGTCCGCAAAGCCACACAGCAGGCCGAGC...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCCTCGTTGCTCTCCGTaGCCTCATCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNPRCSP*PHPAPA
Trigger: AGCGGGAGCTGGATGAGGCCACGGAGAGCAACGAGG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR CAA 72 bp GTGACGCTCTCAACTTCATTCTGCAGCTTGTGGACTTaGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCG +
Preference number: 4 (lower is better)
Translates to: VTLSTSFCSLWT*SLSSARARSPS
Trigger: CGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAGCTGCAGAATGAAGTTGAGAGCGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
3UTR CAA 72 bp AGATCCCTTTCGAACTGGCCCTTGAGCGCCTGCATGTaGACTTCCAGCCGCAGTTTGGCGTCCTCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: RSLSNWPLSACM*TSSRSLASSVA
Trigger: AGCCACGGAGGACGCCAAACTGCGGCTGGAAGTCAACATGCAGGCGCTCAAGGGCCAGTTCGAAAGGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTAGGTGGCAAACTTTCTaGGCAGCTGTGTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: ASSRARARDRALVSFSLARWQTF*AAVLSG
Trigger: GCCAGATAACACAGCTGCTCAGAAAGTTTGCCACCT...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCCTCGTACTGCTGGGTaGGGTTCTCGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDPRTAG*GSRSPS
Trigger: AGAAGGAGATCGAGAACCTCACCCAGCAGTACGAGG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGTTTGCGTAGCTGCTTaGTGGCTTCCTCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTVCVAA*WLPPSP
Trigger: AGGGGAGGGAGGAAGCCATCAAGCAGCTACGCAAAC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGCTGCCTCGAAGCCCTaGTTCTCCGAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNAASKP*FSEGTQ
Trigger: CTGGGTCCCCTCGGAGAAGCAGGGCTTCGAGGCAGC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTGGTCTTGCTGCCTCGAAGCCCTaGTTCTCCGAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: LFQLLKLILCLLLPLLGLAASKP*FSEGTQ
Trigger: CTGGGTCCCCTCGGAGAAGCAGGGCTTCGAGGCAGC...AAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTCCTTAATGCTGGCTaGCTCGAAGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLLNAG*LEALLL
Trigger: GAGAAGCAGGGCTTCGAGGCAGCCAGCATTAAGGAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCTTCCAGCACCCCATTaGACCGCAGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLPAPH*TAAAPA
Trigger: TGCTGGAGCAGCTGCGGTGCAATGGGGTGCTGGAAG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTTCCAGCACCCCATTaGACCGCAGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLPAPH*TAAAPA
Trigger: TGCTGGAGCAGCTGCGGTGCAATGGGGTGCTGGAAG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCGGTCAGCTGCTGCTaGCTCTTGGCAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDAVSCC*LLAKAF
Trigger: AAAGGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTTGAGCTCTGCGATCTaGGCCTGGAGGTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLSSAI*AWRSAI
Trigger: GATCGCTGACCTCCAGGCGCAGATCGCAGAGCTCAA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTCCCCGGCCAGGTCTaGGTTCTCTTTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLPGQV*VLFLQR
Trigger: ACGCTGGAGAAAGAGAACGCAGACCTGGCCGGGGAG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTTATGTTCCACCTCCTaGTTGGCCTGGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLCSTS*LAWPRT
Trigger: GGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACATAA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCGTCCAGCTGGTCTTaGAGGCTGTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSSSWS*RLFRSS
Trigger: GGAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCGTCCAGCTGGTCTTaGAGGCTGTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSSSWS*RLFRSS
Trigger: GGAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCCTTCTCCTCGTACTaGTGGGTGAGGTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDAFSSY*WVRFSI
Trigger: GATCGAGAACCTCACCCAGCAGTACGAGGAGAAGGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTGGCCCTTGAGCGCCTaGATGTTGACTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNWPLSA*MLTSSR
Trigger: GCGGCTGGAAGTCAACATGCAGGCGCTCAAGGGCCA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTCTTCTCCTCATTCTaGTCGTCCCGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLFSSF*SSRAWR
Trigger: TCTCCAAGCCCGGGACGAGCAGAATGAGGAGAAGAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCGAGGTCCGCTTGTTTaGGAGCCCTCTCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNRGPLV*EPSQRR
Trigger: CCGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTTCTCGTCCTGGAGTaGGTTCCTTCCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLLVLE*VPSRQA
Trigger: AGCCTGTCGGGAAGGAACGCACTCCAGGACGAGAAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACCTGAGCTGCTCGGCCTaGTGTGTGGCTTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: LGLLQLMDVLAHVILGADLSCSA*CVALRT
Trigger: GGTCCGCAAAGCCACACAGCAGGCCGAGCAGCTCAG...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTCGTTGCTGAGCTaGTCGGCCTGCTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSSLLS*SACCVA
Trigger: AGCCACACAGCAGGCCGAGCAGCTCAGCAACGAGCT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTAGCTCGTTGCTGAGCTaGTCGGCCTGCTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPSSLLS*SACCVA
Trigger: AGCCACACAGCAGGCCGAGCAGCTCAGCAACGAGCT...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGCCTCCTGCTCGACCTaGTCCTCCAGCTGTGCAATC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQASCST*SSSCAI
Trigger: GATTGCACAGCTGGAGGAGCAGGTCGAGCAGGAGGC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGCCTGCTCCTTGTACTaGTCGGCCATCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQACSLY*SAILRS
Trigger: CGAGCGCAAGATGGCCGAGCAGTACAAGGAGCAGGC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAGCTGCCTCTTGAGCTaGTTGACCCTGGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSCLLS*LTLALP
Trigger: AGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCAGCT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGACAGTGCAGCATTCCTaGTCCCCTCCGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQTVQHS*SPPWEQ
Trigger: CTGCTCCCACGGAGGGGAGCAGGAATGCTGCACTGT...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCCATGGTGCCTTGTTaGTCCCAGATCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDAMVPC*SQISNW
Trigger: CCAGTTGGAGATCTGGGACCAACAAGGCACCATGGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGCGGCCCAGTCAGCCTaGGCCACTGGGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRAAQSA*ATGLLM
Trigger: CATCAACAGCCCAGTGGCCCAGGCTGACTGGGCCGC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCCCAGACGAGTCTCTTaGCGGCCCAGTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNPRRVS*RPSQPG
Trigger: CCCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACATGTCCTCTCGTCTCTaGCTTGGCGAATTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDMSSRL*LGELPV
Trigger: CACGGGCAATTCGCCAAGCCAGAGACGAGAGGACAT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCGGGTCCATATTCTTaGTCAGCCAGGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDAGPYS*SARHSH
Trigger: ATGCGAGTGCCTGGCTGACCAAGAATATGGACCCGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCGTTGGCGGAACTCCTaGAAGACGATCCGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNRWRNS*KTIRLG
Trigger: CCCCAACCGGATCGTCTTCCAGGAGTTCCGCCAACG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGAGTCCAGGTCCTCCTaGAGGTCTGAGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNESRSS*RSEMWP
Trigger: GGGCCACATCTCAGACCTCCAGGAGGACCTGGACTC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTTTCAGCCTTGTTCCTaGCGGCCCGCTCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTFQPCS*RPALSP
Trigger: TGGACTCAGAGCGGGCCGCCAGGAACAAGGCTGAAA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTGAGCTTCCACGGTGCTaGCAAAGTCCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SARSWAWCCVAWSSACPAELPRC*QSPAAS
Trigger: AGAAGCTGCAGGACTTTGCCAGCACCGTGGAAGCTC...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAGATCCCTTTCGAACTaGCCCTTGAGCGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDRSLSN*PLSACM
Trigger: CATGCAGGCGCTCAAGGGCCAGTTCGAAAGGGATCT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAGCTCGGCCTGCTGTGTaGCTTTGCGGACCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAARPAV*LCGPGR
Trigger: GCGACCGGGTCCGCAAAGCCACACAGCAGGCCGAGC...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCTTCAGCGACTTGGTaGCCGCCTGTTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTASATW*PPVSLW
Trigger: CCAGAGAGAAACAGGCGGCCACCAAGTCGCTGAAGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCCTGCTCCCCTCCGTaGGAGCAGCGTCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSCSPP*EQRLLF
Trigger: GAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTGGCGAGCTCGGATCTaGCGCACCTCCCAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLWRARI*RTSQAG
Trigger: TCCGGCCTGGGAGGTGCGTCAGATCCGAGCTCGCCA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGGTGTTTATAGGGGTTaGCCACCACGCAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTGVYRG*PPRRRG
Trigger: GCCTCTTCTGCGTGGTGGTCAACCCCTATAAACACC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGTCCTCCTGGAGGTCTaGGATGTGGCCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRVLLEV*DVALQL
Trigger: GAGCTGGAGGGCCACATCTCAGACCTCCAGGAGGAC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGTCCTCCTGGAGGTCTaGGATGTGGCCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNVLLEV*DVALQL
Trigger: GAGCTGGAGGGCCACATCTCAGACCTCCAGGAGGAC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGCCCTGAGCTCCTGCTaGGTGGCTGTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRALSSC*VAVLSS
Trigger: ACTGGACAGCACAGCCACTCAGCAGGAGCTCAGGGC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGCTCAAGCTGCTCTGTaGGCTCCTCCACCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRAQAAL*APPPPV
Trigger: CACAGGCGGTGGAGGAGCTCACAGAGCAGCTTGAGC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGCTCAAGCTGCTCTGTaGGCTCCTCCACCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNAQAAL*APPPPV
Trigger: CACAGGCGGTGGAGGAGCTCACAGAGCAGCTTGAGC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCGCCTTGGCCCTCTTaGACTGCTCAAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSPWPS*TAQAAL
Trigger: CAGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATGTGGACTTTGTCATTaGGCTCCGCCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRCGLCH*APPGPA
Trigger: AGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATGTGGACTTTGTCATTaGGCTCCGCCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSECGLCH*APPGPA
Trigger: AGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCGTCATCCTTGGAGCTaGCCAGGTCTTCCATTTCGG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTRHPWS*PGLPFR
Trigger: CCGAAATGGAAGACCTGGTCAGCTCCAAGGATGACG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACATGGCAGAGTCGGCCTaGAGCTCCAGGTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNMAESA*SSRSFR
Trigger: CCTGAAAGACCTGGAGCTTCAGGCCGACTCTGCCAT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTGGCCAGCTCGTTGCTaGGCTGCTCGGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRWPARC*AARPAV
Trigger: CACAGCAGGCCGAGCAGCTCAGCAACGAGCTGGCCA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCCTTCTGCGCCATGGTaGCTTGTTGGTCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTPSAPW*LVGPRS
Trigger: AGATCTGGGACCAACAAGGCACCATGGCGCAGAAGG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCTGAGTTGGCCCTTCTaGGCCATGGTGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLSWPF*AMVPCW
Trigger: CCAACAAGGCACCATGGCGCAGAAGGGCCAACTCAG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTCATCATCCTGGGCTaGTGGGATGGGCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLIILG*WDGHKA
Trigger: GGCTTTGTGCCCATCCCAGCAGCCCAGGATGATGAG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGAAGGAAGCCCCTTaGCGATGGGTCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNRKEAP*RWVLSR
Trigger: CCTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAGGAAGGAAGCCCCTTaGCGATGGGTCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQRKEAP*RWVLSR
Trigger: CCTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCT...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATTGGGGTGGCTGCCCTaGTCCGTGCACAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSELGWLP*SVHSFS
Trigger: GGAGAAGCTGTGCACGGAGCAGGGCAGCCACCCCAA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGGTCCAGGCCCACGATaGGGTCCACGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRGPGPR*GPRPST
Trigger: TGTGGAAGGACGTGGACCGCATCGTGGGCCTGGACC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGGTCCAGGCCCACGATaGGGTCCACGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNGPGPR*GPRPST
Trigger: TGTGGAAGGACGTGGACCGCATCGTGGGCCTGGACC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACATGGCGGTCAGCTGCTaGTGCCTCTTGGCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNMAVSC*CLLAKA
Trigger: GGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGCCAT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTTCTCTGCCTTCTGCTaGCGCTCCTTGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTFSAFC*RSLVFC
Trigger: GCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTTTCTCCTCGGTCAGCTaGGAGTGCTTCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPLPASSLLQLPGHVAFAFSSVS*ECFCSS
Trigger: GCTGGAACAGAAGCACTCGCAGCTGACCGAGGAGAA...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCAGCTCTGTCTCTGCCTaGAGCTGTTCCTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSSVSA*SCSCSR
Trigger: CCTGCTACAGGAACAGCTGCAGGCAGAGACAGAGCT...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCTTTCAGCCTGTAGCTaGTGGCCCCTGTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLSACS*WPLSSS
Trigger: GGAGGAAGACAGGGGCCAGCAGCTACAGGCTGAAAG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTTGAGCTCTGCGATCTaGGCCTGGAGGTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLSSAI*AWRSAI
Trigger: GATCGCTGACCTCCAGGCGCAGATCGCAGAGCTCAA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTGCATCTTGAGCTCTaGGATCTGCGCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLHLEL*DLRLEV
Trigger: GACCTCCAGGCGCAGATCGCAGAGCTCAAGATGCAG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTGAACTGCTCAAGCTaGTCTGTGAGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLNCSS*SVSSST
Trigger: GGTGGAGGAGCTCACAGAGCAGCTTGAGCAGTTCAA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTTATGTTCCACCTCCTaGTTGGCCTGGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLCSTS*LAWPRT
Trigger: GGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACATAA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTCCCGCTCCCCATCGCTaGACTTGGACTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VLLFQLLKLILCLLLPLLPAPHR*TWTAAP
Trigger: AGGAGCTGCAGTCCAAGTGCAGCGATGGGGAGCGGG...AAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAGAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCCAGAGCTTCCACGGTaGTGGCAAAGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQPELPR*WQSPAA
Trigger: AGCTGCAGGACTTTGCCAGCACCGTGGAAGCTCTGG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCTCATGGACGTTCTTaGCCACGTCATCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTAHGRS*PRHPWS
Trigger: GCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGCTGCCAGGGCACGTTaGTTTCGCTCGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQAARAR*FRSSSS
Trigger: ACTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTGCTGCCAGGGCACGTTaGTTTCGCTCGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPAARAR*FRSSSS
Trigger: ACTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGC...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTTCTTTGCTGCAGCTaGCAGGGCACGTTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLLCCS*QGTLLS
Trigger: CGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTTCTCGTCCTGGAGTaGGTTCCTTCCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLLVLE*VPSRQA
Trigger: AGCCTGTCGGGAAGGAACGCACTCCAGGACGAGAAG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACGCCTGCTCCTTGTACTaGTCGGCCATCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: LGLLQLMDVLAHVILGADACSLY*SAILRS
Trigger: CGAGCGCAAGATGGCCGAGCAGTACAAGGAGCAGGC...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTCATCCAGCTCCCGCTaGAGCTTCCTGCGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSSSSR*SFLRLA
Trigger: CGCCAACCGCAGGAAGCTGCAGCGGGAGCTGGATGA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATCATCCAGCTCCCGCTaGAGCTTCCTGCGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSESSSSR*SFLRLA
Trigger: CGCCAACCGCAGGAAGCTGCAGCGGGAGCTGGATGA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGAGCTTGCTCTTGAGTaGGTTCACCTCGCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNELALE*VHLAAH
Trigger: ATGGGCCGCGAGGTGAACGCACTCAAGAGCAAGCTC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGAGCTTGCTCTTGAGTaGGTTCACCTCGCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQELALE*VHLAAH
Trigger: ATGGGCCGCGAGGTGAACGCACTCAAGAGCAAGCTC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGGTCCAGGCCCACGATaGGGTCCACTGCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRGPGPR*GPLPTP
Trigger: TGGAGTGGGCAGTGGACCGCATCGTGGGCCTGGACC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCCATGGTGCCTTGTTaGTCCCAGATCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTAMVPC*SQISNW
Trigger: CCAGTTGGAGATCTGGGACCAACAAGGCACCATGGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCATCGTCACTGAGTTaGCCCTTCTGCGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSSSLS*PFCAMV
Trigger: CACCATGGCGCAGAAGGGCCAACTCAGTGACGATGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGCGGCCCAGTCAGCCTaGGCCACTGGGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRAAQSA*ATGLLM
Trigger: CATCAACAGCCCAGTGGCCCAGGCTGACTGGGCCGC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCCTGGGCTGCTGGGATaGGCACAAAGCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNPGLLG*AQSHWR
Trigger: TCTCCAATGGCTTTGTGCCCATCCCAGCAGCCCAGG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGAAGCCCCTTGCCGATaGGTCTTGTCCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQEAPCR*VLSRAL
Trigger: CAAAGCCCTGGACAAGACCCATCGGCAAGGGGCTTC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGAAGCCCCTTGCCGATaGGTCTTGTCCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNEAPCR*VLSRAL
Trigger: CAAAGCCCTGGACAAGACCCATCGGCAAGGGGCTTC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCGGGTCCATATTCTTaGTCAGCCAGGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTAGPYS*SARHSH
Trigger: ATGCGAGTGCCTGGCTGACCAAGAATATGGACCCGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTCTCCGTCATCTTaGCCATCTGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSSPSS*PSGPGP
Trigger: TGGGCCTGGACCAGATGGCCAAGATGACGGAGAGCT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTGCCCTTCTTGGTCTTaGAGGCGCTGGGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNCPSWS*RRWAAS
Trigger: GCTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCAGCGATCTGCTCGTaGAAGTCGCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSAICS*KSLASP
Trigger: GGGTGATGCCAGCGACTTCCACGAGCAGATCGCTGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTTTCAGCCTTGTTCCTaGCGGCCCGCTCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQFQPCS*RPALSP
Trigger: TGGACTCAGAGCGGGCCGCCAGGAACAAGGCTGAAA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATGGGTGTCCTGGAGCTaGGAACTGAGGGACGCCACG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRWVSWS*ELRDAT
Trigger: CGTGGCGTCCCTCAGTTCCCAGCTCCAGGACACCCA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCGCTCCTCCTCCAGCTaGCGCAGCTTCGTAGACACG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNRSSSS*RSFVDT
Trigger: CGTGTCTACGAAGCTGCGCCAGCTGGAGGAGGAGCG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACGCTCCTCCTCCAGCTaGCGCAGCTTCGTAGACACG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRRSSSS*RSFVDT
Trigger: CGTGTCTACGAAGCTGCGCCAGCTGGAGGAGGAGCG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTCGCTCCTCCTCCAGCTaGCGCAGCTTCGTAGACACG +
Preference number: 4 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIRSSSS*RSFVDT
Trigger: CGTGTCTACGAAGCTGCGCCAGCTGGAGGAGGAGCG...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGATCTCCTCGTCCAGCTaGTCTTGCAGGCTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQISSSS*SCRLFR
Trigger: GCGGAACAGCCTGCAAGACCAGCTGGACGAGGAGAT...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGAGCTTCCACGGTGCTaGCAAAGTCCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTELPRC*QSPAAS
Trigger: AGAAGCTGCAGGACTTTGCCAGCACCGTGGAAGCTC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCTTCTTTTCCAGGTTaGACACGAGTTGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDASFPG*TRVAAG
Trigger: ACCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACGGCGCTTCTCGTCCTaGAGTGCGTTCCTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRRRFSS*SAFLPD
Trigger: GTCGGGAAGGAACGCACTCCAGGACGAGAAGCGCCG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCGGCGCTTCTCGTCCTaGAGTGCGTTCCTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNRRFSS*SAFLPD
Trigger: GTCGGGAAGGAACGCACTCCAGGACGAGAAGCGCCG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATGCTCGGCCTGCTGTGTaGCTTTGCGGACCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: KVLQLLLRVGELDVESGDARPAV*LCGPGR
Trigger: GCGACCGGGTCCGCAAAGCCACACAGCAGGCCGAGC...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGCACTCTCATTCTTCTaGGCCGTGCTGCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQALSFF*AVLRSV
Trigger: CACAGAGCGCAGCACGGCCCAGAAGAATGAGAGTGC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCTGCTTCAGCGACTTaGTGGCCGCCTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSASAT*WPPVSL
Trigger: GAGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACCTCGTTGCTCTCCGTaGCCTCATCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRPRCSP*PHPAPA
Trigger: AGCGGGAGCTGGATGAGGCCACGGAGAGCAACGAGG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTGGTGGTGGTGGTGGTaGTTGAGACAGGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTWWWWW*LRQGLC
Trigger: ACAGAGACCCTGTCTCAACCACCACCACCACCACCA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR CAA 72 bp ATGTTGAGAGTGGAGATGTGGCGCTCCAGGTTCTGCTaGGCCTCCATCTCCTCGTCCAGCTGGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: MLRVEMWRSRFC*ASISSSSWSCR
Trigger: CCTGCAAGACCAGCTGGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGCGCCACATCTCCACTCTCAACAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTCATCTTTCCCAACCGTaGCCTTCTTGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SARSWAWCCVAWSSACPAHLSQP*PSCHSP
Trigger: TGGAGAATGGCAAGAAGGTCACGGTTGGGAAAGATG...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGGTGTTTATAGGGGTTaGCCACCACGCAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNGVYRG*PPRRRG
Trigger: GCCTCTTCTGCGTGGTGGTCAACCCCTATAAACACC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTGGTGTTTATAGGGGTTaGCCACCACGCAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPGVYRG*PPRRRG
Trigger: GCCTCTTCTGCGTGGTGGTCAACCCCTATAAACACC...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAGGTGGCAAACTTTCTaGGCAGCTGTGTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDRWQTF*AAVLSG
Trigger: GCCAGATAACACAGCTGCTCAGAAAGTTTGCCACCT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTGTCGGAGGAGGCATTaGGCAGGGAAGTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQCRRRH*AGKSRC
Trigger: ACAACGTGACTTCCCTGCTCAATGCCTCCTCCGACA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTGTCGGAGGAGGCATTaGGCAGGGAAGTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNCRRRH*AGKSRC
Trigger: ACAACGTGACTTCCCTGCTCAATGCCTCCTCCGACA...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGTCCTCCTGGAGGTCTaGGATGTGGCCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRVLLEV*DVALQL
Trigger: GAGCTGGAGGGCCACATCTCAGACCTCCAGGAGGAC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGCCTGGCGGCCCGCTCTaGGTCCAGGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTPGGPL*VQVLLE
Trigger: CTCCAGGAGGACCTGGACTCAGAGCGGGCCGCCAGG...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAGCTCAAGCTGCTCTGTaGGCTCCTCCACCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAAQAAL*APPPPV
Trigger: CACAGGCGGTGGAGGAGCTCACAGAGCAGCTTGAGC...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTCCTGCGGTTGGCGTTaGTGCGCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRSCGWR*CAGTPP
Trigger: AGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTCAAAGGCCTGACGTaGGAAGTTGGAAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLKGLT*EVGKVC
Trigger: GCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCCTTCTGCGCCATGGTaGCTTGTTGGTCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNPSAPW*LVGPRS
Trigger: AGATCTGGGACCAACAAGGCACCATGGCGCAGAAGG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCTGAAACCCATGATTaGCATGGCCTCCACGGTTTC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTAETHD*HGLHGF
Trigger: GAAACCGTGGAGGCCATGGCAATCATGGGTTTCAGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGGCTGCCCTGCTCCGTaGACAGCTTCTCCACGAAAG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRGCPAP*TASPRK
Trigger: CTTTCGTGGAGAAGCTGTGCACGGAGCAGGGCAGCC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTTGGGCGTGGTGTTaGGTAGCGTGGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSWAWC*VAWSSA
Trigger: AGCTGATGACCACGCTACGCAACACCACGCCCAACT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACTTCCAGCACCCCATTaGACCGCAGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSELPAPH*TAAAPA
Trigger: TGCTGGAGCAGCTGCGGTGCAATGGGGTGCTGGAAG...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGCCGGCAGATGCGAATaGCTTCCAGCACCCCATTGC +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRAGRCE*LPAPHC
Trigger: GCAATGGGGTGCTGGAAGGCATTCGCATCTGCCGGC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAGCCGGCAGATGCGAATaGCTTCCAGCACCCCATTGC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEAGRCE*LPAPHC
Trigger: GCAATGGGGTGCTGGAAGGCATTCGCATCTGCCGGC...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCGCTCCTTGGTCTTCTaGAGTTCATCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQRSLVF*SSSSLA
Trigger: GGCCAAGGAGGATGAACTGCAGAAGACCAAGGAGCG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCGGTCAGCTGCGAGTaGTTCTGTTCCAGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSVSCE*FCSSSL
Trigger: TAAGGAGCTGGAACAGAAGCACTCGCAGCTGACCGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTTCTCCTCGGTCAGCTaGGAGTGCTTCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQFSSVS*ECFCSS
Trigger: GCTGGAACAGAAGCACTCGCAGCTGACCGAGGAGAA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTCTGTCTCTGCCTaGAGCTGTTCCTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSSVSA*SCSCSR
Trigger: CCTGCTACAGGAACAGCTGCAGGCAGAGACAGAGCT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACAGCTCTGTCTCTGCCTaGAGCTGTTCCTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNSSVSA*SCSCSR
Trigger: CCTGCTACAGGAACAGCTGCAGGCAGAGACAGAGCT...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCATCTCCTCCAGCTCCTaGTTCTTGGCCGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRISSSS*FLAASR
Trigger: GCGGCTGGCGGCCAAGAAGCAGGAGCTGGAGGAGAT...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCCGAGGTCTCGCTTCTaGTTTTCAGCCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTPRSRF*FSALFL
Trigger: CAGGAACAAGGCTGAAAAGCAGAAGCGAGACCTCGG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCCTGCTGAGTGGCTGTaGTGTCCAGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNPAEWL*CPVCLP
Trigger: TGGAAGACACACTGGACAGCACAGCCACTCAGCAGG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTTGGCCCTCTTGAACTaGTCAAGCTGCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLALLN*SSCSVS
Trigger: GCTCACAGAGCAGCTTGAGCAGTTCAAGAGGGCCAA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTTTGGCCCTCTTGAACTaGTCAAGCTGCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GPLPASSLLQLPGHVAFALALLN*SSCSVS
Trigger: GCTCACAGAGCAGCTTGAGCAGTTCAAGAGGGCCAA...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATTGGACTGCAGCTCCTaGACCTGCGCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLDCSS*TCASSF
Trigger: GAAGCTGGAGGCGCAGGTGCAGGAGCTGCAGTCCAA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATCGTCCAGCTGGTCTTaGAGGCTGTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSESSSWS*RLFRSS
Trigger: GGAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTTCGTCCAGCTGGTCTTaGAGGCTGTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NGLPLGLVKHPCDALNFISSSWS*RLFRSS
Trigger: GGAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGA...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGCCTTCTCCTCGTACTaGTGGGTGAGGTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQAFSSY*WVRFSI
Trigger: GATCGAGAACCTCACCCAGCAGTACGAGGAGAAGGC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAGGTTGGACACGAGTTaGCGCTGGTTGTCCAAATCA +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDRLDTS*RWLSKS
Trigger: TGATTTGGACAACCAGCGGCAACTCGTGTCCAACCT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACGCTCATGGACGTTCTTaGCCACGTCATCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNAHGRS*PRHPWS
Trigger: GCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGC...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATGGCCCTTGAGCGCCTaGATGTTGACTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRWPLSA*MLTSSR
Trigger: GCGGCTGGAAGTCAACATGCAGGCGCTCAAGGGCCA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTTGGCCCTTGAGCGCCTaGATGTTGACTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIWPLSA*MLTSSR
Trigger: GCGGCTGGAAGTCAACATGCAGGCGCTCAAGGGCCA...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCAGCTTCTTCTTTGCTaGAGCTGCCAGGGCACGTTG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNQLLLC*SCQGTL
Trigger: CAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACCTGCTGTGTGGCTTTaGGGACCCGGTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAPAVWL*GPGRSW
Trigger: CCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCATTCTTCTGGGCCGTaGTGCGCTCTGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNHSSGP*CALWPA
Trigger: AGCTGGCCACAGAGCGCAGCACGGCCCAGAAGAATG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTGCCGCTCGAGCTGCTaGCGGGCACTCTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNCRSSC*RALSFF
Trigger: GAAGAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCCATCTCGTGGAGCTTaGTCCGGAGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQPSRGA*SGAPCS
Trigger: AGAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAGCCTCCTGCTCGACCTaGTCCTCCAGCTGTGCAATC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEASCST*SSSCAI
Trigger: GATTGCACAGCTGGAGGAGCAGGTCGAGCAGGAGGC...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATACTGCTCGGCCATCTTaGGCTCGTCCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNTARPS*ARPPPA
Trigger: TGCAGGTGGAGGACGAGCGCAAGATGGCCGAGCAGT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTGGTCTTACTGCTCGGCCATCTTaGGCTCGTCCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LFQLLKLILCLLLPLLGLTARPS*ARPPPA
Trigger: TGCAGGTGGAGGACGAGCGCAAGATGGCCGAGCAGT...AAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGCCATGGTGCCTTGTTaGTCCCAGATCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNAMVPC*SQISNW
Trigger: CCAGTTGGAGATCTGGGACCAACAAGGCACCATGGC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGGCCCTTCTGCGCCATaGTGCCTTGTTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRGPSAP*CLVGPR
Trigger: TCTGGGACCAACAAGGCACCATGGCGCAGAAGGGCC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CTTGTGGACTTTGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCGCTGCACTTTGGGCACAAAGCCATTaGAGAGGAAGGTGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: LVDFVIELRPGPLPIAALWAQSH*RGRCSC
Trigger: ACAACTACACCTTCCTCTCCAATGGCTTTGTGCCCA...AAGTGCAGCGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCCTCCACGGTTTCCTaGAACATCTCATCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTASTVS*NISSSW
Trigger: CCAGGATGATGAGATGTTCCAGGAAACCGTGGAGGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGTCATCTTGGCCATCTaGTCCAGGCCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRVILAI*SRPTMR
Trigger: CCGCATCGTGGGCCTGGACCAGATGGCCAAGATGAC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTGCCCTTCTTGGTCTTaGAGGCGCTGGGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRCPSWS*RRWAAS
Trigger: GCTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATGCAGCGCACGAAGTTaGGCGTGGTGTTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRCSARS*AWCCVA
Trigger: CGCTACGCAACACCACGCCCAACTTCGTGCGCTGCA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTGCAGCGCACGAAGTTaGGCGTGGTGTTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNCSARS*AWCCVA
Trigger: CGCTACGCAACACCACGCCCAACTTCGTGCGCTGCA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCGTTGGCGGAACTCCTaGAAGACGATCCGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNRWRNS*KTIRLG
Trigger: CCCCAACCGGATCGTCTTCCAGGAGTTCCGCCAACG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACGTTGGCGGAACTCCTaGAAGACGATCCGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSERWRNS*KTIRLG
Trigger: CCCCAACCGGATCGTCTTCCAGGAGTTCCGCCAACG...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCCACGACACATCGCCTaGAAGGCCATGATGACATCG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNPRHIA*KAMMTS
Trigger: CGATGTCATCATGGCCTTCCAGGCGATGTGTCGTGG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCCACGACACATCGCCTaGAAGGCCATGATGACATCG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQPRHIA*KAMMTS
Trigger: CGATGTCATCATGGCCTTCCAGGCGATGTGTCGTGG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCTGCTGCCGCTCCTTaGTCTTCTGCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSAAAP*SSAVHP
Trigger: AGGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTCGAGTCGGAGAGCTaGATGTTGAGAGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDFESES*MLRVEM
Trigger: CATCTCCACTCTCAACATCCAGCTCTCCGACTCGAA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTTCTCCTCGTACTGCTaGGTGAGGTTCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTFSSYC*VRFSIS
Trigger: GGAGATCGAGAACCTCACCCAGCAGTACGAGGAGAA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCTTCTTTTCCAGGTTaGACACGAGTTGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTASFPG*TRVAAG
Trigger: ACCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCTCGAGTTCCTCTTTaGCTTCCAAGGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDARVPL*LPRPLQ
Trigger: TTGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACAGATCCCTTTCGAACTaGCCCTTGAGCGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNRSLSN*PLSACM
Trigger: CATGCAGGCGCTCAAGGGCCAGTTCGAAAGGGATCT...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACTTCCCGACAGGCTACTaGCCAGCTCCTCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LGLLQLMDVLAHVILGADFPTGY*PAPLPV
Trigger: AACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAA...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAGGACCCGGTCGCTCATaGCCTCCATGTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAGPGRS*PPCCPA
Trigger: AGCAGGGCAACATGGAGGCCATGAGCGACCGGGTCC...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGCTCGGCCTGCTGTGTaGCTTTGCGGACCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVARPAV*LCGPGR
Trigger: GCGACCGGGTCCGCAAAGCCACACAGCAGGCCGAGC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGCCCCCTCCATCTCGTaGAGCTTGCTCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLAPSIS*SLLRSS
Trigger: GGAGCTCCGGAGCAAGCTCCACGAGATGGAGGGGGC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCGCCTGTTTCTCTCTaGCCTCCTGCTCGACCTGCT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEPPVSL*PPARPA
Trigger: AGCAGGTCGAGCAGGAGGCCAGAGAGAAACAGGCGG...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCTGCTTCAGCGACTTaGTGGCCGCCTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSASAT*WPPVSL
Trigger: GAGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATTGGCGTTGATGCGCTaGGACTCCTCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLALMR*DSSSAS
Trigger: GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCCTCGTTGCTCTCCGTaGCCTCATCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRPRCSP*PHPAPA
Trigger: AGCGGGAGCTGGATGAGGCCACGGAGAGCAACGAGG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTACGTTGCCCAGGCTaGAGGGTGGTGGTTTTTATA +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLRCPG*RVVVFI
Trigger: TATAAAAACCACCACCCTCCAGCCTGGGCAACGTAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGGCGAGCTCGGATCTaGCGCACCTCCCAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCWRARI*RTSQAG
Trigger: TCCGGCCTGGGAGGTGCGTCAGATCCGAGCTCGCCA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300036.6
ENST00000452625.7
CDS-3UTR TCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATCTTTCCCAACCGTaGCCTTCTTGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTHLSQP*PSCHSP
Trigger: TGGAGAATGGCAAGAAGGTCACGGTTGGGAAAGATG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTTGTTCTGATCATCCATaGCCAGGATCTCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: SARSWAWCCVAWSSACPACSDHP*PGSHPP
Trigger: TGGAGGATGAGATCCTGGTCATGGATGATCAGAACA...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAGGGCATTGTTCTTCTaGGCGATTTCATCGTCAAGC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDRALFF*AISSSS
Trigger: GCTTGACGATGAAATCGCTCAGAAGAACAATGCCCT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCCTGGCGGCCCGCTCTaGGTCCAGGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVPGGPL*VQVLLE
Trigger: CTCCAGGAGGACCTGGACTCAGAGCGGGCCGCCAGG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGCTCAAGCTGCTCTGTaGGCTCCTCCACCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLAQAAL*APPPPV
Trigger: CACAGGCGGTGGAGGAGCTCACAGAGCAGCTTGAGC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTCGCCTTGGCCCTCTTaGACTGCTCAAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSPWPS*TAQAAL
Trigger: CAGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATCGCCTTGGCCCTCTTaGACTGCTCAAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSESPWPS*TAQAAL
Trigger: CAGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTGTGGACTTTGTCATTaGGCTCCGCCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLCGLCH*APPGPA
Trigger: AGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCGGAGAGCTGGATGTTaGGAGTGGAGATGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNRRAGC*EWRCGA
Trigger: AGCGCCACATCTCCACTCTCAACATCCAGCTCTCCG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTCGGAGAGCTGGATGTTaGGAGTGGAGATGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIRRAGC*EWRCGA
Trigger: AGCGCCACATCTCCACTCTCAACATCCAGCTCTCCG...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTTCCATTTCGGCTTTaGGCATTTTGTTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLPFRL*AFCWSA
Trigger: AGCGGACCAACAAAATGCTCAAAGCCGAAATGGAAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTGGCCAGCTCGTTGCTaGGCTGCTCGGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVWPARC*AARPAV
Trigger: CACAGCAGGCCGAGCAGCTCAGCAACGAGCTGGCCA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTGGCCTTGGTTCCATTaGAGTCTGCGTCTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNWPWFH*SLRLEC
Trigger: ACACTCGAGACGCAGACTTCAATGGAACCAAGGCCA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTGCAGGTTAGGGAATaGATTGGGAGTGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNLQVRE*IGSGGR
Trigger: CCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACTGAGTTGGCCCTTCTaGGCCATGGTGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLSWPF*AMVPCW
Trigger: CCAACAAGGCACCATGGCGCAGAAGGGCCAACTCAG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCCCGATCTTGAAGCATaGTCCGGTAGGCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNPDLEA*SGRPCL
Trigger: CAGACACGGCCTACCGGAGCATGCTTCAAGATCGGG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGCTGAAACCCATGATTaGCATGGCCTCCACGGTTTC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNAETHD*HGLHGF
Trigger: GAAACCGTGGAGGCCATGGCAATCATGGGTTTCAGC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAGGAAGGAAGCCCCTTaGCGATGGGTCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRRKEAP*RWVLSR
Trigger: CCTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTATGGCGGTCAGCTGCTaGTGCCTCTTGGCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: VLLFQLLKLILCLLLPLLMAVSC*CLLAKA
Trigger: GGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGCCAT...AAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAGAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCGGTCAGCTGCGAGTaGTTCTGTTCCAGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSVSCE*FCSSSL
Trigger: TAAGGAGCTGGAACAGAAGCACTCGCAGCTGACCGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCGGGCCTCCATCTCATaGAGTATCTCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNRASIS*SISSSS
Trigger: GGAGCTGGAGGAGATACTGCATGAGATGGAGGCCCG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACGGGCCTCCATCTCATaGAGTATCTCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRRASIS*SISSSS
Trigger: GGAGCTGGAGGAGATACTGCATGAGATGGAGGCCCG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACTTTCAGCCTGTAGCTaGTGGCCCCTGTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLSACS*WPLSSS
Trigger: GGAGGAAGACAGGGGCCAGCAGCTACAGGCTGAAAG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATTGAGCTCTGCGATCTaGGCCTGGAGGTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSELSSAI*AWRSAI
Trigger: GATCGCTGACCTCCAGGCGCAGATCGCAGAGCTCAA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTGAACTGCTCAAGCTaGTCTGTGAGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNLNCSS*SVSSST
Trigger: GGTGGAGGAGCTCACAGAGCAGCTTGAGCAGTTCAA...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTTCTTTCTCCAGCGTCTaGTTATTCTTGTCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: ASSRARARDRALVSFSLASFSSV*LFLSRF
Trigger: GAACCTAGACAAGAATAAGCAGACGCTGGAGAAAGA...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCTCCCCGGCCAGGTCTaGGTTCTCTTTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRLPGQV*VLFLQR
Trigger: ACGCTGGAGAAAGAGAACGCAGACCTGGCCGGGGAG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTATGTTCCACCTCCTaGTTGGCCTGGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNLCSTS*LAWPRT
Trigger: GGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACATAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGTGCTGGCAAAGTCCTaGAGCTTCTTCTTCGAGTCG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQVLAKS*SFFFES
Trigger: CGACTCGAAGAAGAAGCTGCAGGACTTTGCCAGCAC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCAGAGCTTCCACGGTaGTGGCAAAGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEPELPR*WQSPAA
Trigger: AGCTGCAGGACTTTGCCAGCACCGTGGAAGCTCTGG...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGCTGCCAGGGCACGTTaGTTTCGCTCGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNAARAR*FRSSSS
Trigger: ACTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAACTGGCCAGCTCCTCTaGCAGTTCCTCCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRTGQLL*QFLLLE
Trigger: CTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACTTCTCGTCCTGGAGTaGGTTCCTTCCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSELLVLE*VPSRQA
Trigger: AGCCTGTCGGGAAGGAACGCACTCCAGGACGAGAAG...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGCCTCCTGCTCGACCTaGTCCTCCAGCTGTGCAATC +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRASCST*SSSCAI
Trigger: GATTGCACAGCTGGAGGAGCAGGTCGAGCAGGAGGC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCAGCTTCTTGTCTTTCTaGTTCAGCGACTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSFLSF*FSDLVA
Trigger: GGCCACCAAGTCGCTGAAGCAGAAAGACAAGAAGCT...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGGCATTGCCTTTCTCTaGCTGCTCCTTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQGIAFL*LLLVLL
Trigger: GAGCAGTACAAGGAGCAGGCAGAGAAAGGCAATGCC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CAAGGTCCAGCATCTGCTGGGCCATCTTCTTCCTTTCAGCCTGTAGCTGCTGGCGGCATTGCCTTTCTCTaGCTGCTCCTTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: QGPASAGPSSSFQPVAAGGIAFL*LLLVLL
Trigger: GAGCAGTACAAGGAGCAGGCAGAGAAAGGCAATGCC...GCCAGCAGCTACAGGCTGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGAGCTTGCTCTTGAGTaGGTTCACCTCGCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRELALE*VHLAAH
Trigger: ATGGGCCGCGAGGTGAACGCACTCAAGAGCAAGCTC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTGGTCTTGAGCTTGCTCTTGAGTaGGTTCACCTCGCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LFQLLKLILCLLLPLLGLELALE*VHLAAH
Trigger: ATGGGCCGCGAGGTGAACGCACTCAAGAGCAAGCTC...AAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCAGGGTGTAAACAGTaGAGCATTCCTGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSGCKQ*SIPAPL
Trigger: GAGGGGAGCAGGAATGCTGCACTGTTTACACCCTGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGCGGCCCAGTCAGCCTaGGCCACTGGGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVAAQSA*ATGLLM
Trigger: CATCAACAGCCCAGTGGCCCAGGCTGACTGGGCCGC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATCTTTCTTGCCCTTGTaGGAGGAGGCCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSASFLPL*EEATTA
Trigger: GGCCGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTCTCGTCTCTGGCTTaGCGAATTGCCCGTGATTTT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLSSLA*RIARDF
Trigger: AAAATCACGGGCAATTCGCCAAGCCAGAGACGAGAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTGGGCACAAAGCCATTaGAGAGGAAGGTGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDWAQSH*RGRCSC
Trigger: ACAACTACACCTTCCTCTCCAATGGCTTTGTGCCCA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCTGGGCTGCTGGGATaGGCACAAAGCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEPGLLG*AQSHWR
Trigger: TCTCCAATGGCTTTGTGCCCATCCCAGCAGCCCAGG...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGCTCATATGTTGCCTTaGCCAAAGCCTCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDAHMLP*PKPLQQ
Trigger: TTGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTGAAGCCCCTTGCCGATaGGTCTTGTCCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VLLFQLLKLILCLLLPLLEAPCR*VLSRAL
Trigger: CAAAGCCCTGGACAAGACCCATCGGCAAGGGGCTTC...AAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAGAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTGGTCTTGGAGGCGCTaGGCAGCGAGCTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLWSWRR*AASSPS
Trigger: TGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACCA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTGCAGCGCACGAAGTTaGGCGTGGTGTTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRCSARS*AWCCVA
Trigger: CGCTACGCAACACCACGCCCAACTTCGTGCGCTGCA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTGGCAAAAGCCTTTCTaGCCAAGTAGCCACGACACA +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTWQKPF*PSSHDT
Trigger: TGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTTGTCACCTGCAGCAGTaGCTTCACTTTGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SARSWAWCCVAWSSACPACHLQQ*LHFGEK
Trigger: CTTTTCACCAAAGTGAAGCCACTGCTGCAGGTGACA...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCTGCTGCCGCTCCTTaGTCTTCTGCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSAAAP*SSAVHP
Trigger: AGGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAGCTCGTGGAAGTCGCTaGCATCACCCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAARGSR*HHPPAS
Trigger: GGAAGCTGGAGGGTGATGCCAGCGACTTCCACGAGC...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTCAGCGATCTGCTCGTaGAAGTCGCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSAICS*KSLASP
Trigger: GGGTGATGCCAGCGACTTCCACGAGCAGATCGCTGA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGAGTCCAGGTCCTCCTaGAGGTCTGAGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRESRSS*RSEMWP
Trigger: GGGCCACATCTCAGACCTCCAGGAGGACCTGGACTC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGACACGAGTTGCCGCTaGTTGTCCAAATCAACAACC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTDTSCR*LSKSTT
Trigger: GGTTGTTGATTTGGACAACCAGCGGCAACTCGTGTC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACTTCCAGCCGCAGTTTaGCGTCCTCCGTGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSALPAAV*RPPWLA
Trigger: TGCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTCCCGACAGGCTACTaGCCAGCTCCTCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNFPTGY*PAPLPV
Trigger: AACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAAGCTCCTCCTCCAGCTaGGCGATCCGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSISSSSS*AIRASR
Trigger: CCTGGAGGCCCGGATCGCCCAGCTGGAGGAGGAGCT...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGGACCCGGTCGCTCATaGCCTCCATGTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLGPGRS*PPCCPA
Trigger: AGCAGGGCAACATGGAGGCCATGAGCGACCGGGTCC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGCACTCTCATTCTTCTaGGCCGTGCTGCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNALSFF*AVLRSV
Trigger: CACAGAGCGCAGCACGGCCCAGAAGAATGAGAGTGC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGCCCCCTCCATCTCGTaGAGCTTGCTCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKAPSIS*SLLRSS
Trigger: GGAGCTCCGGAGCAAGCTCCACGAGATGGAGGGGGC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGCCCCCTCCATCTCGTaGAGCTTGCTCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVAPSIS*SLLRSS
Trigger: GGAGCTCCGGAGCAAGCTCCACGAGATGGAGGGGGC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCCCAGGCTGGAGGGTaGTGGTTTTTATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTAQAGG*WFLYSL
Trigger: CAAGGAATATAAAAACCACCACCCTCCAGCCTGGGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCCTGACGTGAGAAGTTaGAAAGGTTTGCAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDPDVRS*KGLQVR
Trigger: CCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAACTTCTCATCGTCACTaGGTTGGCCCTTCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRTSHRH*VGPSAP
Trigger: TGGCGCAGAAGGGCCAACTCAGTGACGATGAGAAGT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTTTTCCAGCTCTCCCGTaGTACTTGTGTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GPLPASSLLQLPGHVAFAFPALP*YLCLSC
Trigger: GCAAGAAAGACACAAGTATCACGGGAGAGCTGGAAA...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGGAAGGTGTAGTTGTTaGAGCCCTCCAAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTGRCSC*SPPKAS
Trigger: ACTTGCTTTTGGAGGGCTTCAACAACTACACCTTCC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTCTTTGTTCACGCGGGTaGGTATCCAGCGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: VLLFQLLKLILCLLLPLLLCSRG*VSSGKG
Trigger: GCCTTTTCCGCTGGATACTCACCCGCGTGAACAAAG...AAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAGAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTTCCCAGCATAATGGATaGTGGAGAACTCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SARSWAWCCVAWSSACPASQHNG*WRTQSC
Trigger: ACAAGACTGAGTTCTCCATCATCCATTATGCTGGGA...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGTCCTCCTGGAGGTCTaGGATGTGGCCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVVLLEV*DVALQL
Trigger: GAGCTGGAGGGCCACATCTCAGACCTCCAGGAGGAC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCTGGCGGCCCGCTCTaGGTCCAGGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGPGGPL*VQVLLE
Trigger: CTCCAGGAGGACCTGGACTCAGAGCGGGCCGCCAGG...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTGTGGACTTTGTCATTaGGCTCCGCCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVCGLCH*APPGPA
Trigger: AGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGGCCAGCTCGTTGCTaGGCTGCTCGGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCWPARC*AARPAV
Trigger: CACAGCAGGCCGAGCAGCTCAGCAACGAGCTGGCCA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTTGGCCAGCTCGTTGCTaGGCTGCTCGGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPWPARC*AARPAV
Trigger: CACAGCAGGCCGAGCAGCTCAGCAACGAGCTGGCCA...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTCCTGCGGTTGGCGTTaGTGCGCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSCGWR*CAGTPP
Trigger: AGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCTCAAAGGCCTGACGTaGGAAGTTGGAAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLKGLT*EVGKVC
Trigger: GCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGAATTCTCAAAGGCCTaGCGTGAGAAGTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTEFSKA*REKLER
Trigger: CCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACCTTCTGCGCCATGGTaGCTTGTTGGTCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRPSAPW*LVGPRS
Trigger: AGATCTGGGACCAACAAGGCACCATGGCGCAGAAGG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGCTGCCTCGAAGCCCTaGTTCTCCGAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCAASKP*FSEGTQ
Trigger: CTGGGTCCCCTCGGAGAAGCAGGGCTTCGAGGCAGC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGCTGCCTCGAAGCCCTaGTTCTCCGAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTAASKP*FSEGTQ
Trigger: CTGGGTCCCCTCGGAGAAGCAGGGCTTCGAGGCAGC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp CTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTGGTCTTCTCCTTAATGCTGGCTaGCTCGAAGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LFQLLKLILCLLLPLLGLLLNAG*LEALLL
Trigger: GAGAAGCAGGGCTTCGAGGCAGCCAGCATTAAGGAG...AAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTACTTGTGTCTTTCTTaGCCTTGTGGGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNYLCLS*PCGRRP
Trigger: TGGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CAAGGTCCAGCATCTGCTGGGCCATCTTCTTCCTTTCAGCCTGTAGCTGCTGGCTCACTGTTTTGGCGTTaGCGAAAGCCTCCAGAATCG +
Preference number: 4 (lower is better)
Translates to: QGPASAGPSSSFQPVAAGSLFWR*RKPPES
Trigger: CGATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGA...GCCAGCAGCTACAGGCTGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTTCAATATGGATAGCTaGTCCTCCTCGCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTFNMDS*SSSLKP
Trigger: GGGTTTCAGCGAGGAGGAGCAGCTATCCATATTGAA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTACGATATTTCCAAGCTaGAGGACCGATGATACCACC +
Preference number: 4 (lower is better)
Translates to: GPLPASSLLQLPGHVAFATIFPS*RTDDTT
Trigger: GGTGGTATCATCGGTCCTGCAGCTTGGAAATATCGT...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAAGGCGCTCATATGTTaGCTTGGCCAAAGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNKALIC*LGQSLY
Trigger: GTAGAGGCTTTGGCCAAGGCAACATATGAGCGCCTT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCAGGAAGGAAGCCCCTTaGCGATGGGTCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRRKEAP*RWVLSR
Trigger: CCTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCT...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGGCTGCCCTGCTCCGTaGACAGCTTCTCCACGAAAG +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLGCPAP*TASPRK
Trigger: CTTTCGTGGAGAAGCTGTGCACGGAGCAGGGCAGCC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTGGGGTGGCTGCCCTaGTCCGTGCACAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKLGWLP*SVHSFS
Trigger: GGAGAAGCTGTGCACGGAGCAGGGCAGCCACCCCAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTCCAGGCCCACGATaGGGTCCACGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKGPGPR*GPRPST
Trigger: TGTGGAAGGACGTGGACCGCATCGTGGGCCTGGACC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCCACTGTGCGGAACATaGCCTTCTTGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNPLCGT*PSWSWR
Trigger: CCTCCAAGACCAAGAAGGGCATGTTCCGCACAGTGG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTCGCTCCTTGGTCTTCTaGAGTTCATCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIRSLVF*SSSSLA
Trigger: GGCCAAGGAGGATGAACTGCAGAAGACCAAGGAGCG...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTCTCCTCGGTCAGCTaGGAGTGCTTCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNFSSVS*ECFCSS
Trigger: GCTGGAACAGAAGCACTCGCAGCTGACCGAGGAGAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCAAGGTCCAGCATCTaGTGGGCCATCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSRSSI*WAIFFL
Trigger: AAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTCAAGGTCCAGCATCTaGTGGGCCATCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNSRSSI*WAIFFL
Trigger: AAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTGA...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTCAAGTTGCAGCTTCTaGCTGGCAGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSSCSF*LAASSS
Trigger: GGAGGAGGAAGCTGCCAGGCAGAAGCTGCAACTTGA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATGGAGGTCAGCGATCTaGTCGTGGAAGTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAWRSAI*SWKSLA
Trigger: TGCCAGCGACTTCCACGAGCAGATCGCTGACCTCCA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTTGAGCTCTGCGATCTaGGCCTGGAGGTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRLSSAI*AWRSAI
Trigger: GATCGCTGACCTCCAGGCGCAGATCGCAGAGCTCAA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCTGCATCTTGAGCTCTaGGATCTGCGCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRLHLEL*DLRLEV
Trigger: GACCTCCAGGCGCAGATCGCAGAGCTCAAGATGCAG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTCCTGCTGAGTGGCTGTaGTGTCCAGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIPAEWL*CPVCLP
Trigger: TGGAAGACACACTGGACAGCACAGCCACTCAGCAGG...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATCGCTGCACTTGGACTaGAGCTCCTGCACCTGCGCC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSLHLD*SSCTCA
Trigger: GGCGCAGGTGCAGGAGCTGCAGTCCAAGTGCAGCGA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCCCGCTCCCCATCGCTaGACTTGGACTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVPAPHR*TWTAAP
Trigger: AGGAGCTGCAGTCCAAGTGCAGCGATGGGGAGCGGG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAACCCGCTCCCCATCGCTaGACTTGGACTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKPAPHR*TWTAAP
Trigger: AGGAGCTGCAGTCCAAGTGCAGCGATGGGGAGCGGG...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGTTGGACACGAGTTaGCGCTGGTTGTCCAAATCA +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNRLDTS*RWLSKS
Trigger: TGATTTGGACAACCAGCGGCAACTCGTGTCCAACCT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACTCTTCTCCTCATTCTaGTCGTCCCGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLFSSF*SSRAWR
Trigger: TCTCCAAGCCCGGGACGAGCAGAATGAGGAGAAGAG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTCTTCTTTGCTGCAGCTaGCAGGGCACGTTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: NGLPLGLVKHPCDALNFILLCCS*QGTLLS
Trigger: CGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAG...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCAGCTTCTTCTTTGCTaGAGCTGCCAGGGCACGTTG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNQLLLC*SCQGTL
Trigger: CAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTCCAGCTTCTTCTTTaGTGCAGCTGCCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNFQLLL*CSCQGT
Trigger: CGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATTCCAGCTTCTTCTTTaGTGCAGCTGCCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEFQLLL*CSCQGT
Trigger: CGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATTCCAGCTTCTTCTTTaGTGCAGCTGCCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRFQLLL*CSCQGT
Trigger: CGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCGAGGTCCGCTTGTTTaGGAGCCCTCTCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSRGPLV*EPSQRR
Trigger: CCGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCCTGCTGTGTGGCTTTaGGGACCCGGTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVPAVWL*GPGRSW
Trigger: CCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAACTGAGCTGCTCGGCCTaGTGTGTGGCTTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKLSCSA*CVALRT
Trigger: GGTCCGCAAAGCCACACAGCAGGCCGAGCAGCTCAG...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATTGCCGCTCGAGCTGCTaGCGGGCACTCTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: KVLQLLLRVGELDVESGDCRSSC*RALSFF
Trigger: GAAGAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCA...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCACTGCTCGGCCATCTTaGGCTCGTCCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLTARPS*ARPPPA
Trigger: TGCAGGTGGAGGACGAGCGCAAGATGGCCGAGCAGT...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGCCTGCTCCTTGTACTaGTCGGCCATCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLACSLY*SAILRS
Trigger: CGAGCGCAAGATGGCCGAGCAGTACAAGGAGCAGGC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATTGCCTTTCTCTGCCTaGTCCTTGTACTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSELPFSA*SLYCSA
Trigger: GGCCGAGCAGTACAAGGAGCAGGCAGAGAAAGGCAA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGGCCCATGGCCTCGTTaGTCTCCGTGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVGPWPR*SPWPHP
Trigger: TGGATGAGGCCACGGAGAGCAACGAGGCCATGGGCC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGCCCATGGCCTCGTTaGTCTCCGTGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKGPWPR*SPWPHP
Trigger: TGGATGAGGCCACGGAGAGCAACGAGGCCATGGGCC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGCACTTGGTGAACTGTaGGTGTCTGAGGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNALGEL*VSEVWK
Trigger: TTTCCACACCTCAGACACGCACAGTTCACCAAGTGC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATCATCGTCACTGAGTTaGCCCTTCTGCGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRSSSLS*PFCAMV
Trigger: CACCATGGCGCAGAAGGGCCAACTCAGTGACGATGA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGCGGCCCAGTCAGCCTaGGCCACTGGGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCAAQSA*ATGLLM
Trigger: CATCAACAGCCCAGTGGCCCAGGCTGACTGGGCCGC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGCGGCCCAGTCAGCCTaGGCCACTGGGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTAAQSA*ATGLLM
Trigger: CATCAACAGCCCAGTGGCCCAGGCTGACTGGGCCGC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCCCAGACGAGTCTCTTaGCGGCCCAGTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCPRRVS*RPSQPG
Trigger: CCCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCCCAGACGAGTCTCTTaGCGGCCCAGTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSPRRVS*RPSQPG
Trigger: CCCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCCCAGACGAGTCTCTTaGCGGCCCAGTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSPRRVS*RPSQPG
Trigger: CCCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGCCCAGACGAGTCTCTTaGCGGCCCAGTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTPRRVS*RPSQPG
Trigger: CCCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGG...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCCTGGGCTGCTGGGATaGGCACAAAGCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRPGLLG*AQSHWR
Trigger: TCTCCAATGGCTTTGTGCCCATCCCAGCAGCCCAGG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGAAGCCCCTTGCCGATaGGTCTTGTCCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPREAPCR*VLSRAL
Trigger: CAAAGCCCTGGACAAGACCCATCGGCAAGGGGCTTC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGCGGGTCCATATTCTTaGTCAGCCAGGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNAGPYS*SARHSH
Trigger: ATGCGAGTGCCTGGCTGACCAAGAATATGGACCCGC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATGGTCTTGGAGGCGCTaGGCAGCGAGCTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKWSWRR*AASSPS
Trigger: TGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACCA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGCACGAAGTTGGGCGTaGTGTTGCGTAGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRARSWA*CCVAWS
Trigger: TGACCACGCTACGCAACACCACGCCCAACTTCGTGC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAGCACGAAGTTGGGCGTaGTGTTGCGTAGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAARSWA*CCVAWS
Trigger: TGACCACGCTACGCAACACCACGCCCAACTTCGTGC...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACCACGACACATCGCCTaGAAGGCCATGATGACATCG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRPRHIA*KAMMTS
Trigger: CGATGTCATCATGGCCTTCCAGGCGATGTGTCGTGG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTGGCAAAAGCCTTTCTaGCCAAGTAGCCACGACACA +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNWQKPF*PSSHDT
Trigger: TGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CAAGGTCCAGCATCTGCTGGGCCATCTTCTTCCTTTCAGCCTGTAGCTGCTGGCTGGCAAAAGCCTTTCTaGCCAAGTAGCCACGACACA +
Preference number: 4 (lower is better)
Translates to: QGPASAGPSSSFQPVAAGWQKPF*PSSHDT
Trigger: TGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCA...GCCAGCAGCTACAGGCTGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGCTCGTGGAAGTCGCTaGCATCACCCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLARGSR*HHPPAS
Trigger: GGAAGCTGGAGGGTGATGCCAGCGACTTCCACGAGC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATCAGCGATCTGCTCGTaGAAGTCGCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSASAICS*KSLASP
Trigger: GGGTGATGCCAGCGACTTCCACGAGCAGATCGCTGA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAACCTCCTGCTTGGCCTaGCCCAGGACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRETSCLA*PRTRSS
Trigger: GGAGCTGCGGGTCCTGGGCCAGGCCAAGCAGGAGGT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCACCTCCTGCTTGGCCTaGCCCAGGACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFTSCLA*PRTRSS
Trigger: GGAGCTGCGGGTCCTGGGCCAGGCCAAGCAGGAGGT...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTCATTCTGCAGCTTGTaGACTTTGTCATTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSFCSL*TLSLSS
Trigger: GGAGCTCAATGACAAAGTCCACAAGCTGCAGAATGA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCAGCTCCTGGGTGTCCTaGAGCTGGGAACTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLSSWVS*SWELRD
Trigger: GTCCCTCAGTTCCCAGCTCCAGGACACCCAGGAGCT...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGAGCTTCCACGGTGCTaGCAAAGTCCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNELPRC*QSPAAS
Trigger: AGAAGCTGCAGGACTTTGCCAGCACCGTGGAAGCTC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAGAGCTTCCACGGTGCTaGCAAAGTCCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEELPRC*QSPAAS
Trigger: AGAAGCTGCAGGACTTTGCCAGCACCGTGGAAGCTC...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTTTCTCGATCTCCTTCTaGAACCTCTTCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GPLPASSLLQLPGHVAFAFSISF*NLFFPS
Trigger: AGAGGGGAAGAAGAGGTTCCAGAAGGAGATCGAGAA...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGACACGAGTTGCCGCTaGTTGTCCAAATCAACAACC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQDTSCR*LSKSTT
Trigger: GGTTGTTGATTTGGACAACCAGCGGCAACTCGTGTC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGCTCGAGTTCCTCTTTaGCTTCCAAGGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNARVPL*LPRPLQ
Trigger: TTGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAGATCCCTTTCGAACTaGCCCTTGAGCGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRRSLSN*PLSACM
Trigger: CATGCAGGCGCTCAAGGGCCAGTTCGAAAGGGATCT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCAGCTCCTCCTCCAGCTaGGCGATCCGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSSSSS*AIRASR
Trigger: CCTGGAGGCCCGGATCGCCCAGCTGGAGGAGGAGCT...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGACCCGGTCGCTCATaGCCTCCATGTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKGPGRS*PPCCPA
Trigger: AGCAGGGCAACATGGAGGCCATGAGCGACCGGGTCC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGGACCCGGTCGCTCATaGCCTCCATGTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVGPGRS*PPCCPA
Trigger: AGCAGGGCAACATGGAGGCCATGAGCGACCGGGTCC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTGCTCGGCCTGCTGTGTaGCTTTGCGGACCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFARPAV*LCGPGR
Trigger: GCGACCGGGTCCGCAAAGCCACACAGCAGGCCGAGC...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAGCACTCTCATTCTTCTaGGCCGTGCTGCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAALSFF*AVLRSV
Trigger: CACAGAGCGCAGCACGGCCCAGAAGAATGAGAGTGC...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGCCCCCTCCATCTCGTaGAGCTTGCTCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTAPSIS*SLLRSS
Trigger: GGAGCTCCGGAGCAAGCTCCACGAGATGGAGGGGGC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTCTGCTTCAGCGACTTaGTGGCCGCCTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSASAT*WPPVSL
Trigger: GAGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATTTGGCGTTGATGCGCTaGGACTCCTCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KVLQLLLRVGELDVESGDLALMR*DSSSAS
Trigger: GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAA...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATATCACCTCGCGGCCCATaGCCTCGTTGCTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSISPRGP*PRCSPW
Trigger: CCACGGAGAGCAACGAGGCCATGGGCCGCGAGGTGA...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCACCTCGCGGCCCATaGCCTCGTTGCTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSPRGP*PRCSPW
Trigger: CCACGGAGAGCAACGAGGCCATGGGCCGCGAGGTGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGTCACCTCGCGGCCCATaGCCTCGTTGCTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSSPRGP*PRCSPW
Trigger: CCACGGAGAGCAACGAGGCCATGGGCCGCGAGGTGA...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCTCGTTTCCTCGCCTaGTGCATCACTGCGAAGTTT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSRFLA*CITAKF
Trigger: AAACTTCGCAGTGATGCACCAGGCGAGGAAACGAGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR TCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTGTTCTGATCATCCATaGCCAGGATCTCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQCSDHP*PGSHPP
Trigger: TGGAGGATGAGATCCTGGTCATGGATGATCAGAACA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGTCCTCCTGGAGGTCTaGGATGTGGCCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIVLLEV*DVALQL
Trigger: GAGCTGGAGGGCCACATCTCAGACCTCCAGGAGGAC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGCCCTGAGCTCCTGCTaGGTGGCTGTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTALSSC*VAVLSS
Trigger: ACTGGACAGCACAGCCACTCAGCAGGAGCTCAGGGC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCGCCCTGAGCTCCTGCTaGGTGGCTGTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSALSSC*VAVLSS
Trigger: ACTGGACAGCACAGCCACTCAGCAGGAGCTCAGGGC...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGCCCTGAGCTCCTGCTaGGTGGCTGTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSALSSC*VAVLSS
Trigger: ACTGGACAGCACAGCCACTCAGCAGGAGCTCAGGGC...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATATGTGGACTTTGTCATTaGGCTCCGCCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSICGLCH*APPGPA
Trigger: AGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACA...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGTGGACTTTGTCATTaGGCTCCGCCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCCGLCH*APPGPA
Trigger: AGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp CAAGGTCCAGCATCTGCTGGGCCATCTTCTTCCTTTCAGCCTGTAGCTGCTGGCCTTCCATTTCGGCTTTaGGCATTTTGTTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: QGPASAGPSSSFQPVAAGLPFRL*AFCWSA
Trigger: AGCGGACCAACAAAATGCTCAAAGCCGAAATGGAAG...GCCAGCAGCTACAGGCTGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCATGGCAGAGTCGGCCTaGAGCTCCAGGTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLMAESA*SSRSFR
Trigger: CCTGAAAGACCTGGAGCTTCAGGCCGACTCTGCCAT...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTGGCCAGCTCGTTGCTaGGCTGCTCGGCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRWPARC*AARPAV
Trigger: CACAGCAGGCCGAGCAGCTCAGCAACGAGCTGGCCA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTCCTGCGGTTGGCGTTaGTGCGCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSSCGWR*CAGTPP
Trigger: AGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACCTTCTGCGCCATGGTaGCTTGTTGGTCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAPSAPW*LVGPRS
Trigger: AGATCTGGGACCAACAAGGCACCATGGCGCAGAAGG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAGCTGAAACCCATGATTaGCATGGCCTCCACGGTTTC +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEAETHD*HGLHGF
Trigger: GAAACCGTGGAGGCCATGGCAATCATGGGTTTCAGC...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTTCAATATGGATAGCTaGTCCTCCTCGCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQFNMDS*SSSLKP
Trigger: GGGTTTCAGCGAGGAGGAGCAGCTATCCATATTGAA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTTGGGGTGGCTGCCCTaGTCCGTGCACAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCLGWLP*SVHSFS
Trigger: GGAGAAGCTGTGCACGGAGCAGGGCAGCCACCCCAA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTGGTCCAGGCCCACGATaGGGTCCACGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPGPGPR*GPRPST
Trigger: TGTGGAAGGACGTGGACCGCATCGTGGGCCTGGACC...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGCCGGCAGATGCGAATaGCTTCCAGCACCCCATTGC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVAGRCE*LPAPHC
Trigger: GCAATGGGGTGCTGGAAGGCATTCGCATCTGCCGGC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAGCGGTCAGCTGCTGCTaGCTCTTGGCAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAAVSCC*LLAKAF
Trigger: AAAGGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGC...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATCGGTCAGCTGCGAGTaGTTCTGTTCCAGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSESVSCE*FCSSSL
Trigger: TAAGGAGCTGGAACAGAAGCACTCGCAGCTGACCGA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAATCTCCTCCAGCTCCTaGTTCTTGGCCGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIISSSS*FLAASR
Trigger: GCGGCTGGCGGCCAAGAAGCAGGAGCTGGAGGAGAT...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTGGAGGTCAGCGATCTaGTCGTGGAAGTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLWRSAI*SWKSLA
Trigger: TGCCAGCGACTTCCACGAGCAGATCGCTGACCTCCA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCCTGCTGAGTGGCTGTaGTGTCCAGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRPAEWL*CPVCLP
Trigger: TGGAAGACACACTGGACAGCACAGCCACTCAGCAGG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTGGCCCTCTTGAACTaGTCAAGCTGCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNLALLN*SSCSVS
Trigger: GCTCACAGAGCAGCTTGAGCAGTTCAAGAGGGCCAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTCTTTCTCCAGCGTCTaGTTATTCTTGTCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSFSSV*LFLSRF
Trigger: GAACCTAGACAAGAATAAGCAGACGCTGGAGAAAGA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTGGACTGCAGCTCCTaGACCTGCGCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKLDCSS*TCASSF
Trigger: GAAGCTGGAGGCGCAGGTGCAGGAGCTGCAGTCCAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTTGGACTGCAGCTCCTaGACCTGCGCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVLDCSS*TCASSF
Trigger: GAAGCTGGAGGCGCAGGTGCAGGAGCTGCAGTCCAA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCGCTGCACTTGGACTaGAGCTCCTGCACCTGCGCC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTSLHLD*SSCTCA
Trigger: GGCGCAGGTGCAGGAGCTGCAGTCCAAGTGCAGCGA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCCCGCTCCCCATCGCTaGACTTGGACTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSPAPHR*TWTAAP
Trigger: AGGAGCTGCAGTCCAAGTGCAGCGATGGGGAGCGGG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTGTGCTGGCAAAGTCCTaGAGCTTCTTCTTCGAGTCG +
Preference number: 4 (lower is better)
Translates to: VLLFQLLKLILCLLLPLLVLAKS*SFFFES
Trigger: CGACTCGAAGAAGAAGCTGCAGGACTTTGCCAGCAC...AAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAGAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGCTCATGGACGTTCTTaGCCACGTCATCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRAHGRS*PRHPWS
Trigger: GCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCCTGCTGTGTGGCTTTaGGGACCCGGTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCPAVWL*GPGRSW
Trigger: CCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCTGAGCTGCTCGGCCTaGTGTGTGGCTTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSLSCSA*CVALRT
Trigger: GGTCCGCAAAGCCACACAGCAGGCCGAGCAGCTCAG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCATTCTTCTGGGCCGTaGTGCGCTCTGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVHSSGP*CALWPA
Trigger: AGCTGGCCACAGAGCGCAGCACGGCCCAGAAGAATG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTGCCGCTCGAGCTGCTaGCGGGCACTCTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVCRSSC*RALSFF
Trigger: GAAGAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTTCTGCCGCTCGAGCTaGTGCCGGGCACTCTCATTC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVFCRSS*CRALSF
Trigger: GAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCAGAA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACCATCTCGTGGAGCTTaGTCCGGAGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAPSRGA*SGAPCS
Trigger: AGAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTACTGCTCGGCCATCTTaGGCTCGTCCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVTARPS*ARPPPA
Trigger: TGCAGGTGGAGGACGAGCGCAAGATGGCCGAGCAGT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGGCATTGCCTTTCTCTaGCTGCTCCTTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNGIAFL*LLLVLL
Trigger: GAGCAGTACAAGGAGCAGGCAGAGAAAGGCAATGCC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTCATCCAGCTCCCGCTaGAGCTTCCTGCGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSSSSSR*SFLRLA
Trigger: CGCCAACCGCAGGAAGCTGCAGCGGGAGCTGGATGA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCATGTAAACAGAATTaGCAGGGACCGGTTACCGTG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSCKQN*QGPVTV
Trigger: CACGGTAACCGGTCCCTGGCAATTCTGTTTACATGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCATGTAAACAGAATTaGCAGGGACCGGTTACCGTG +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSCKQN*QGPVTV
Trigger: CACGGTAACCGGTCCCTGGCAATTCTGTTTACATGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTACAGTGCAGCATTCCTaGTCCCCTCCGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVTVQHS*SPPWEQ
Trigger: CTGCTCCCACGGAGGGGAGCAGGAATGCTGCACTGT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGCCCTTCTGCGCCATaGTGCCTTGTTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKGPSAP*CLVGPR
Trigger: TCTGGGACCAACAAGGCACCATGGCGCAGAAGGGCC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CAGCTTAATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTCTTCTCCGAGTAGATaGGCAGGTGTTTATAGGGGT +
Preference number: 4 (lower is better)
Translates to: QLNGLPLGLVKHPCDALNSSPSR*AGVYRG
Trigger: ACCCCTATAAACACCTGCCCATCTACTCGGAGAAGA...GTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATTAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAATCATCCTGGGCTGCTaGGATGGGCACAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRIILGC*DGHKAI
Trigger: AATGGCTTTGTGCCCATCCCAGCAGCCCAGGATGAT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGCCTCCACGGTTTCCTaGAACATCTCATCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRASTVS*NISSSW
Trigger: CCAGGATGATGAGATGTTCCAGGAAACCGTGGAGGC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGCTCATATGTTGCCTTaGCCAAAGCCTCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQAHMLP*PKPLQQ
Trigger: TTGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGCAGGGCCAGCACACCTaGAGGGTTGTTCGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTQGQHT*RVVRSL
Trigger: GAGCGACCGAACAACCCTCCAGGTGTGCTGGCCCTG...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGTCATCTTGGCCATCTaGTCCAGGCCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVVILAI*SRPTMR
Trigger: CCGCATCGTGGGCCTGGACCAGATGGCCAAGATGAC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGTCATCTTGGCCATCTaGTCCAGGCCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKVILAI*SRPTMR
Trigger: CCGCATCGTGGGCCTGGACCAGATGGCCAAGATGAC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGTGGTCTTGGAGGCGCTaGGCAGCGAGCTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSWSWRR*AASSPS
Trigger: TGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACCA...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGGTCTTGGAGGCGCTaGGCAGCGAGCTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCWSWRR*AASSPS
Trigger: TGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACCA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATGCAGCGCACGAAGTTaGGCGTGGTGTTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKCSARS*AWCCVA
Trigger: CGCTACGCAACACCACGCCCAACTTCGTGCGCTGCA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTATCCTGTATAAGTTaGGGTCAAGTTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLSCIS*GQVPGL
Trigger: AAGCCCTGGAACTTGACCCCAACTTATACAGGATAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTCTGCTGCCGCTCCTTaGTCTTCTGCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSAAAP*SSAVHP
Trigger: AGGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTACCTCCTGCTTGGCCTaGCCCAGGACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGTSCLA*PRTRSS
Trigger: GGAGCTGCGGGTCCTGGGCCAGGCCAAGCAGGAGGT...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCCCCATCGCTGCACTTaGACTGCAGCTCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVPHRCT*TAAPAP
Trigger: AGGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGGGTGTCCTGGAGCTaGGAACTGAGGGACGCCACG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCWVSWS*ELRDAT
Trigger: CGTGGCGTCCCTCAGTTCCCAGCTCCAGGACACCCA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCGCTCCTCCTCCAGCTaGCGCAGCTTCGTAGACACG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSRSSSS*RSFVDT
Trigger: CGTGTCTACGAAGCTGCGCCAGCTGGAGGAGGAGCG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTTCTCGATCTCCTTCTaGAACCTCTTCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNFSISF*NLFFPS
Trigger: AGAGGGGAAGAAGAGGTTCCAGAAGGAGATCGAGAA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGCTTCTTTTCCAGGTTaGACACGAGTTGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNASFPG*TRVAAG
Trigger: ACCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAGCTTCTTTTCCAGGTTaGACACGAGTTGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEASFPG*TRVAAG
Trigger: ACCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGC...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTGCTTCCAAGCTCTTaGCTTTCTTCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLLPSS*LSSHSL
Trigger: AAGAGAATGAGAAGAAAGCCAAGAGCTTGGAAGCAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCGGCGCTTCTCGTCCTaGAGTGCGTTCCTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCRRFSS*SAFLPD
Trigger: GTCGGGAAGGAACGCACTCCAGGACGAGAAGCGCCG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCGGCGCTTCTCGTCCTaGAGTGCGTTCCTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPRRFSS*SAFLPD
Trigger: GTCGGGAAGGAACGCACTCCAGGACGAGAAGCGCCG...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGGACCCGGTCGCTCATaGCCTCCATGTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIGPGRS*PPCCPA
Trigger: AGCAGGGCAACATGGAGGCCATGAGCGACCGGGTCC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGCCCCCTCCATCTCGTaGAGCTTGCTCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRAPSIS*SLLRSS
Trigger: GGAGCTCCGGAGCAAGCTCCACGAGATGGAGGGGGC...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCCGCCTGTTTCTCTCTaGCCTCCTGCTCGACCTGCT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVPPVSL*PPARPA
Trigger: AGCAGGTCGAGCAGGAGGCCAGAGAGAAACAGGCGG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGCTTCAGCGACTTGGTaGCCGCCTGTTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLASATW*PPVSLW
Trigger: CCAGAGAGAAACAGGCGGCCACCAAGTCGCTGAAGC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATCTGCTTCAGCGACTTaGTGGCCGCCTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSASASAT*WPPVSL
Trigger: GAGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTTGGCGTTGATGCGCTaGGACTCCTCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVLALMR*DSSSAS
Trigger: GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGCCTCGTTGCTCTCCGTaGCCTCATCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTPRCSP*PHPAPA
Trigger: AGCGGGAGCTGGATGAGGCCACGGAGAGCAACGAGG...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCCGTAGGCAAAAGATaGGCCTTGCGTGATACTTGT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSVGKR*ALRDTC
Trigger: ACAAGTATCACGCAAGGCCCATCTTTTGCCTACGGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCCGTAGGCAAAAGATaGGCCTTGCGTGATACTTGT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSVGKR*ALRDTC
Trigger: ACAAGTATCACGCAAGGCCCATCTTTTGCCTACGGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACAAGCTGCAGGACCGATaGTACCACCTTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: LGLLQLMDVLAHVILGADKLQDR*YHLQYG
Trigger: TCCATATTGAAGGTGGTATCATCGGTCCTGCAGCTT...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCCCAGCATAATGGATaGTGGAGAACTCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSQHNG*WRTQSC
Trigger: ACAAGACTGAGTTCTCCATCATCCATTATGCTGGGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGATAGTTTATTGTTCTaGTCATCCATGACCAGGATC +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDDSLLF*SSMTRI
Trigger: GATCCTGGTCATGGATGATCAGAACAATAAACTATC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCGTCCTCCTGGAGGTCTaGGATGTGGCCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFVLLEV*DVALQL
Trigger: GAGCTGGAGGGCCACATCTCAGACCTCCAGGAGGAC...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR TCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGCTCAAGCTGCTCTGTaGGCTCCTCCACCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRAQAAL*APPPPV
Trigger: CACAGGCGGTGGAGGAGCTCACAGAGCAGCTTGAGC...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCGTCATCCTTGGAGCTaGCCAGGTCTTCCATTTCGG +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLRHPWS*PGLPFR
Trigger: CCGAAATGGAAGACCTGGTCAGCTCCAAGGATGACG...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTATGGCAGAGTCGGCCTaGAGCTCCAGGTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVMAESA*SSRSFR
Trigger: CCTGAAAGACCTGGAGCTTCAGGCCGACTCTGCCAT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGTTTGCGTAGCTGCTTaGTGGCTTCCTCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVVCVAA*WLPPSP
Trigger: AGGGGAGGGAGGAAGCCATCAAGCAGCTACGCAAAC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATGGCCTTGGTTCCATTaGAGTCTGCGTCTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAWPWFH*SLRLEC
Trigger: ACACTCGAGACGCAGACTTCAATGGAACCAAGGCCA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCTCAAAGGCCTGACGTaGGAAGTTGGAAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNLKGLT*EVGKVC
Trigger: GCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCCTTTTCAATTCATGTaGCTACAGAAGGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTPFQFM*LQKALG
Trigger: ACCAAGTGCCTTCTGTAGTCACATGAATTGAAAAGG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCTGAGTTGGCCCTTCTaGGCCATGGTGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVLSWPF*AMVPCW
Trigger: CCAACAAGGCACCATGGCGCAGAAGGGCCAACTCAG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCCTTAATGCTGGCTaGCTCGAAGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLLLNAG*LEALLL
Trigger: GAGAAGCAGGGCTTCGAGGCAGCCAGCATTAAGGAG...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCCCGATCTTGAAGCATaGTCCGGTAGGCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVPDLEA*SGRPCL
Trigger: CAGACACGGCCTACCGGAGCATGCTTCAAGATCGGG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATCACTGTTTTGGCGTTaGCGAAAGCCTCCAGAATCG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRSLFWR*RKPPES
Trigger: CGATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGGCTGCCCTGCTCCGTaGACAGCTTCTCCACGAAAG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCGCPAP*TASPRK
Trigger: CTTTCGTGGAGAAGCTGTGCACGGAGCAGGGCAGCC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCGGCTGCCCTGCTCCGTaGACAGCTTCTCCACGAAAG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSGCPAP*TASPRK
Trigger: CTTTCGTGGAGAAGCTGTGCACGGAGCAGGGCAGCC...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGGTCCAGGCCCACGATaGGGTCCACGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRGPGPR*GPRPST
Trigger: TGTGGAAGGACGTGGACCGCATCGTGGGCCTGGACC...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAATCAGCTTGCCCAGCTaGTCCTTGTACAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKISLPS*SLYSCP
Trigger: GGGGCAGCTGTACAAGGAGCAGCTGGGCAAGCTGAT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATAGTTGGGCGTGGTGTTaGGTAGCGTGGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: KVLQLLLRVGELDVESGDSWAWC*VAWSSA
Trigger: AGCTGATGACCACGCTACGCAACACCACGCCCAACT...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCTTCCAGCACCCCATTaGACCGCAGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSLPAPH*TAAAPA
Trigger: TGCTGGAGCAGCTGCGGTGCAATGGGGTGCTGGAAG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGCCGGCAGATGCGAATaGCTTCCAGCACCCCATTGC +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIAGRCE*LPAPHC
Trigger: GCAATGGGGTGCTGGAAGGCATTCGCATCTGCCGGC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTATGGCGGTCAGCTGCTaGTGCCTCTTGGCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVMAVSC*CLLAKA
Trigger: GGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGCCAT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTATCTCCTCCAGCTCCTaGTTCTTGGCCGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRISSSS*FLAASR
Trigger: GCGGCTGGCGGCCAAGAAGCAGGAGCTGGAGGAGAT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAACGGGCCTCCATCTCATaGAGTATCTCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKRASIS*SISSSS
Trigger: GGAGCTGGAGGAGATACTGCATGAGATGGAGGCCCG...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATCAAGGTCCAGCATCTaGTGGGCCATCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSESRSSI*WAIFFL
Trigger: AAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTGA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTGAACTGCTCAAGCTaGTCTGTGAGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSALNCSS*SVSSST
Trigger: GGTGGAGGAGCTCACAGAGCAGCTTGAGCAGTTCAA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACTCCCCGGCCAGGTCTaGGTTCTCTTTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSILPGQV*VLFLQR
Trigger: ACGCTGGAGAAAGAGAACGCAGACCTGGCCGGGGAG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCTCCCCGGCCAGGTCTaGGTTCTCTTTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPLPGQV*VLFLQR
Trigger: ACGCTGGAGAAAGAGAACGCAGACCTGGCCGGGGAG...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGTTGGACTGCAGCTCCTaGACCTGCGCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSLDCSS*TCASSF
Trigger: GAAGCTGGAGGCGCAGGTGCAGGAGCTGCAGTCCAA...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACCCGCTCCCCATCGCTaGACTTGGACTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREPAPHR*TWTAAP
Trigger: AGGAGCTGCAGTCCAAGTGCAGCGATGGGGAGCGGG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAAGGTTGGACACGAGTTaGCGCTGGTTGTCCAAATCA +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSERLDTS*RWLSKS
Trigger: TGATTTGGACAACCAGCGGCAACTCGTGTCCAACCT...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTGGCCCTTGAGCGCCTaGATGTTGACTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSWPLSA*MLTSSR
Trigger: GCGGCTGGAAGTCAACATGCAGGCGCTCAAGGGCCA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATAGGTCCTCTTGTAGCTaGATGAGGTCTGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNRSSCS*MRSASK
Trigger: CTTGGAAGCAGACCTCATGCAGCTACAAGAGGACCT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCCGAGGTCCGCTTGTTTaGGAGCCCTCTCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVRGPLV*EPSQRR
Trigger: CCGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCG...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCTTCTCGTCCTGGAGTaGGTTCCTTCCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVLLVLE*VPSRQA
Trigger: AGCCTGTCGGGAAGGAACGCACTCCAGGACGAGAAG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTGCTGTGTGGCTTTaGGGACCCGGTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFPAVWL*GPGRSW
Trigger: CCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAAGCTCGTTGCTGAGCTaGTCGGCCTGCTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSISSLLS*SACCVA
Trigger: AGCCACACAGCAGGCCGAGCAGCTCAGCAACGAGCT...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAGCTTCTTGTCTTTCTaGTTCAGCGACTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRSFLSF*FSDLVA
Trigger: GGCCACCAAGTCGCTGAAGCAGAAAGACAAGAAGCT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGCCTGCTCCTTGTACTaGTCGGCCATCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSACSLY*SAILRS
Trigger: CGAGCGCAAGATGGCCGAGCAGTACAAGGAGCAGGC...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCATCCAGCTCCCGCTaGAGCTTCCTGCGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSSSSR*SFLRLA
Trigger: CGCCAACCGCAGGAAGCTGCAGCGGGAGCTGGATGA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCGGCCCATGGCCTCGTTaGTCTCCGTGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFGPWPR*SPWPHP
Trigger: TGGATGAGGCCACGGAGAGCAACGAGGCCATGGGCC...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGGTTCCATTGAAGTCTaGGTCTCGAGTGTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNGSIEV*VSSVRF
Trigger: GAAACGGACACTCGAGACGCAGACTTCAATGGAACC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTTGCCCAGGCTGGAGTaGAATGATGCAATTATAGCT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLPRLE*NDAIIA
Trigger: AGCTATAATTGCATCATTGCACTCCAGCCTGGGCAA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTACAGTGCAGCATTCCTaGTCCCCTCCGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCTVQHS*SPPWEQ
Trigger: CTGCTCCCACGGAGGGGAGCAGGAATGCTGCACTGT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGACAGTGCAGCATTCCTaGTCCCCTCCGTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTTVQHS*SPPWEQ
Trigger: CTGCTCCCACGGAGGGGAGCAGGAATGCTGCACTGT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR GCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGCAAAAGATGGGCCTTaGGTGATACTTGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNAKDGP*VILVSF
Trigger: GAAAGACACAAGTATCACGCAAGGCCCATCTTTTGC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCGTTTCCTCGCCTGGTaGATCACTGCGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRRFLAW*ITAKFP
Trigger: AGGAAACTTCGCAGTGATGCACCAGGCGAGGAAACG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGGCCCTTCTGCGCCATaGTGCCTTGTTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTGPSAP*CLVGPR
Trigger: TCTGGGACCAACAAGGCACCATGGCGCAGAAGGGCC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCCAGACGAGTCTCTTaGCGGCCCAGTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGPRRVS*RPSQPG
Trigger: CCCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGG...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCCTGGGCTGCTGGGATaGGCACAAAGCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVPGLLG*AQSHWR
Trigger: TCTCCAATGGCTTTGTGCCCATCCCAGCAGCCCAGG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAGCCTCCACGGTTTCCTaGAACATCTCATCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAASTVS*NISSSW
Trigger: CCAGGATGATGAGATGTTCCAGGAAACCGTGGAGGC...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACGCTCATATGTTGCCTTaGCCAAAGCCTCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: LGLLQLMDVLAHVILGADAHMLP*PKPLQQ
Trigger: TTGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGC...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGAAGCCCCTTGCCGATaGGTCTTGTCCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKEAPCR*VLSRAL
Trigger: CAAAGCCCTGGACAAGACCCATCGGCAAGGGGCTTC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCAGGGCCAGCACACCTaGAGGGTTGTTCGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFQGQHT*RVVRSL
Trigger: GAGCGACCGAACAACCCTCCAGGTGTGCTGGCCCTG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGCTCTCCGTCATCTTaGCCATCTGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSSPSS*PSGPGP
Trigger: TGGGCCTGGACCAGATGGCCAAGATGACGGAGAGCT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATGGTCTTGGAGGCGCTaGGCAGCGAGCTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREWSWRR*AASSPS
Trigger: TGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACCA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCTGCCCTTCTTGGTCTTaGAGGCGCTGGGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFCPSWS*RRWAAS
Trigger: GCTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCA...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGCAGCGCACGAAGTTaGGCGTGGTGTTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCCSARS*AWCCVA
Trigger: CGCTACGCAACACCACGCCCAACTTCGTGCGCTGCA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTTGCAGCGCACGAAGTTaGGCGTGGTGTTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSCSARS*AWCCVA
Trigger: CGCTACGCAACACCACGCCCAACTTCGTGCGCTGCA...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACGTTGGCGGAACTCCTaGAAGACGATCCGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIRWRNS*KTIRLG
Trigger: CCCCAACCGGATCGTCTTCCAGGAGTTCCGCCAACG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCGTTGGCGGAACTCCTaGAAGACGATCCGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCRWRNS*KTIRLG
Trigger: CCCCAACCGGATCGTCTTCCAGGAGTTCCGCCAACG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTATCCTGTATAAGTTaGGGTCAAGTTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLSCIS*GQVPGL
Trigger: AAGCCCTGGAACTTGACCCCAACTTATACAGGATAG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATCTGCTGCCGCTCCTTaGTCTTCTGCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSASAAAP*SSAVHP
Trigger: AGGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAGGTCCAGCATCTGCTaGGCCATCTTCTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRRSSIC*AIFFLS
Trigger: TGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTAGGTCCAGCATCTGCTaGGCCATCTTCTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIRSSIC*AIFFLS
Trigger: TGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCT...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTCAGCGATCTGCTCGTaGAAGTCGCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSAICS*KSLASP
Trigger: GGGTGATGCCAGCGACTTCCACGAGCAGATCGCTGA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCTGCGATCTGCGCCTaGAGGTCAGCGATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSAICA*RSAICS
Trigger: CGAGCAGATCGCTGACCTCCAGGCGCAGATCGCAGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGTCTGCGATCTGCGCCTaGAGGTCAGCGATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSSAICA*RSAICS
Trigger: CGAGCAGATCGCTGACCTCCAGGCGCAGATCGCAGA...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATATCTGCGATCTGCGCCTaGAGGTCAGCGATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSISAICA*RSAICS
Trigger: CGAGCAGATCGCTGACCTCCAGGCGCAGATCGCAGA...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTTCTGCGATCTGCGCCTaGAGGTCAGCGATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPSAICA*RSAICS
Trigger: CGAGCAGATCGCTGACCTCCAGGCGCAGATCGCAGA...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTTCATCGTCAAGCCTaGCCAGGGCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTFHRQA*PGPPAA
Trigger: AGCTGCAGGCGGCCCTGGCCAGGCTTGACGATGAAA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTTCAGCCTTGTTCCTaGCGGCCCGCTCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKFQPCS*RPALSP
Trigger: TGGACTCAGAGCGGGCCGCCAGGAACAAGGCTGAAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCCCCATCGCTGCACTTaGACTGCAGCTCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCPHRCT*TAAPAP
Trigger: AGGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCCCCATCGCTGCACTTaGACTGCAGCTCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSPHRCT*TAAPAP
Trigger: AGGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCATTCTGCAGCTTGTaGACTTTGTCATTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSFCSL*TLSLSS
Trigger: GGAGCTCAATGACAAAGTCCACAAGCTGCAGAATGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTGGGTGTCCTGGAGCTaGGAACTGAGGGACGCCACG +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFWVSWS*ELRDAT
Trigger: CGTGGCGTCCCTCAGTTCCCAGCTCCAGGACACCCA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTGGGTGTCCTGGAGCTaGGAACTGAGGGACGCCACG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVWVSWS*ELRDAT
Trigger: CGTGGCGTCCCTCAGTTCCCAGCTCCAGGACACCCA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCAGCTCCTGGGTGTCCTaGAGCTGGGAACTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSSSWVS*SWELRD
Trigger: GTCCCTCAGTTCCCAGCTCCAGGACACCCAGGAGCT...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTAGCTCCTGGGTGTCCTaGAGCTGGGAACTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSSSWVS*SWELRD
Trigger: GTCCCTCAGTTCCCAGCTCCAGGACACCCAGGAGCT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCGCTCCTCCTCCAGCTaGCGCAGCTTCGTAGACACG +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRRSSSS*RSFVDT
Trigger: CGTGTCTACGAAGCTGCGCCAGCTGGAGGAGGAGCG...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCGCTCCTCCTCCAGCTaGCGCAGCTTCGTAGACACG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVRSSSS*RSFVDT
Trigger: CGTGTCTACGAAGCTGCGCCAGCTGGAGGAGGAGCG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAATCTCCTCGTCCAGCTaGTCTTGCAGGCTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKISSSS*SCRLFR
Trigger: GCGGAACAGCCTGCAAGACCAGCTGGACGAGGAGAT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGCTCCAGGTTCTGCTTaGCCTCCATCTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKAPGSA*PPSPRP
Trigger: TGGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGACACGAGTTGCCGCTaGTTGTCCAAATCAACAACC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNDTSCR*LSKSTT
Trigger: GGTTGTTGATTTGGACAACCAGCGGCAACTCGTGTC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCTTCCAGCCGCAGTTTaGCGTCCTCCGTGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCLPAAV*RPPWLA
Trigger: TGCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCTTCCAGCCGCAGTTTaGCGTCCTCCGTGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSLPAAV*RPPWLA
Trigger: TGCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATGCTCGTCCCGGGCTTaGAGATCCCTTTCGAACTGG +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKCSSRA*RSLSNW
Trigger: CCAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTCTGCTTCCAAGCTCTTaGCTTTCTTCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: GPLPASSLLQLPGHVAFALLPSS*LSSHSL
Trigger: AAGAGAATGAGAAGAAAGCCAAGAGCTTGGAAGCAG...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACCGCCTGTTTCTCTCTaGCCTCCTGCTCGACCTGCT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIPPVSL*PPARPA
Trigger: AGCAGGTCGAGCAGGAGGCCAGAGAGAAACAGGCGG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTTGGCGTTGATGCGCTaGGACTCCTCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSLALMR*DSSSAS
Trigger: GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTTTGGCGTTGATGCGCTaGGACTCCTCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPLALMR*DSSSAS
Trigger: GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAA...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCCTCGTTGCTCTCCGTaGCCTCATCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFPRCSP*PHPAPA
Trigger: AGCGGGAGCTGGATGAGGCCACGGAGAGCAACGAGG...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGGAATGAATTGGGAGTaGGGGCCGGCGGCACCCATT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCGMNWE*GPAAPI
Trigger: AATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCCTGCTCCCCTCCGTaGGAGCAGCGTCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSCSPP*EQRLLF
Trigger: GAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATCTCGTTTCCTCGCCTaGTGCATCACTGCGAAGTTT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSESRFLA*CITAKF
Trigger: AAACTTCGCAGTGATGCACCAGGCGAGGAAACGAGA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTCCAAGTATTGTCTATTaGGGAAATCCTGAGAGCACC +
Preference number: 4 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPPSIVY*GNPEST
Trigger: GGTGCTCTCAGGATTTCCCCAATAGACAATACTTGG...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGGTGTTTATAGGGGTTaGCCACCACGCAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVGVYRG*PPRRRG
Trigger: GCCTCTTCTGCGTGGTGGTCAACCCCTATAAACACC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGAATTTGCCGAATCGTaGGGAGTTGTCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNEFAES*GVVVLH
Trigger: GTGAAGAACGACAACTCCTCACGATTCGGCAAATTC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATAAGCTGCAGGACCGATaGTACCACCTTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNKLQDR*YHLQYG
Trigger: TCCATATTGAAGGTGGTATCATCGGTCCTGCAGCTT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTGTTTCTTTCCTTCTTaGAGACGATATTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDCFFPS*RRYFQA
Trigger: AGCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCTTTGTTCACGCGGGTaGGTATCCAGCGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVLCSRG*VSSGKG
Trigger: GCCTTTTCCGCTGGATACTCACCCGCGTGAACAAAG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATGTCGGAGGAGGCATTaGGCAGGGAAGTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKCRRRH*AGKSRC
Trigger: ACAACGTGACTTCCCTGCTCAATGCCTCCTCCGACA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATGTTCTGATCATCCATaGCCAGGATCTCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSECSDHP*PGSHPP
Trigger: TGGAGGATGAGATCCTGGTCATGGATGATCAGAACA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGATAGTTTATTGTTCTaGTCATCCATGACCAGGATC +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTDSLLF*SSMTRI
Trigger: GATCCTGGTCATGGATGATCAGAACAATAAACTATC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAGGGCATTGTTCTTCTaGGCGATTTCATCGTCAAGC +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRRALFF*AISSSS
Trigger: GCTTGACGATGAAATCGCTCAGAAGAACAATGCCCT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTGTCCTCCTGGAGGTCTaGGATGTGGCCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGVLLEV*DVALQL
Trigger: GAGCTGGAGGGCCACATCTCAGACCTCCAGGAGGAC...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTGCTCAAGCTGCTCTGTaGGCTCCTCCACCGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGAQAAL*APPPPV
Trigger: CACAGGCGGTGGAGGAGCTCACAGAGCAGCTTGAGC...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCGCCTTGGCCCTCTTaGACTGCTCAAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSPWPS*TAQAAL
Trigger: CAGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCGCCTTGGCCCTCTTaGACTGCTCAAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTSPWPS*TAQAAL
Trigger: CAGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACGGAGAGCTGGATGTTaGGAGTGGAGATGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIRRAGC*EWRCGA
Trigger: AGCGCCACATCTCCACTCTCAACATCCAGCTCTCCG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACTTCCATTTCGGCTTTaGGCATTTTGTTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLPFRL*AFCWSA
Trigger: AGCGGACCAACAAAATGCTCAAAGCCGAAATGGAAG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAACGTCATCCTTGGAGCTaGCCAGGTCTTCCATTTCGG +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKRHPWS*PGLPFR
Trigger: CCGAAATGGAAGACCTGGTCAGCTCCAAGGATGACG...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCATGGCAGAGTCGGCCTaGAGCTCCAGGTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSMAESA*SSRSFR
Trigger: CCTGAAAGACCTGGAGCTTCAGGCCGACTCTGCCAT...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTATGGCAGAGTCGGCCTaGAGCTCCAGGTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPMAESA*SSRSFR
Trigger: CCTGAAAGACCTGGAGCTTCAGGCCGACTCTGCCAT...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTTGCAGGTTAGGGAATaGATTGGGAGTGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSLQVRE*IGSGGR
Trigger: CCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACTGAGTTGGCCCTTCTaGGCCATGGTGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSILSWPF*AMVPCW
Trigger: CCAACAAGGCACCATGGCGCAGAAGGGCCAACTCAG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAACTCCTTAATGCTGGCTaGCTCGAAGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKLLNAG*LEALLL
Trigger: GAGAAGCAGGGCTTCGAGGCAGCCAGCATTAAGGAG...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCTCCTTAATGCTGGCTaGCTCGAAGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVLLNAG*LEALLL
Trigger: GAGAAGCAGGGCTTCGAGGCAGCCAGCATTAAGGAG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCCCGATCTTGAAGCATaGTCCGGTAGGCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCPDLEA*SGRPCL
Trigger: CAGACACGGCCTACCGGAGCATGCTTCAAGATCGGG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCCCGATCTTGAAGCATaGTCCGGTAGGCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSPDLEA*SGRPCL
Trigger: CAGACACGGCCTACCGGAGCATGCTTCAAGATCGGG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATACTTGTGTCTTTCTTaGCCTTGTGGGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAYLCLS*PCGRRP
Trigger: TGGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCTCATCATCCTGGGCTaGTGGGATGGGCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPLIILG*WDGHKA
Trigger: GGCTTTGTGCCCATCCCAGCAGCCCAGGATGATGAG...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAACGATATTTCCAAGCTaGAGGACCGATGATACCACC +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRTIFPS*RTDDTT
Trigger: GGTGGTATCATCGGTCCTGCAGCTTGGAAATATCGT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATACGATATTTCCAAGCTaGAGGACCGATGATACCACC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNTIFPS*RTDDTT
Trigger: GGTGGTATCATCGGTCCTGCAGCTTGGAAATATCGT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCAAGGCGCTCATATGTTaGCTTGGCCAAAGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRKALIC*LGQSLY
Trigger: GTAGAGGCTTTGGCCAAGGCAACATATGAGCGCCTT...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCAGGAAGGAAGCCCCTTaGCGATGGGTCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSRKEAP*RWVLSR
Trigger: CCTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCT...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGGCTGCCCTGCTCCGTaGACAGCTTCTCCACGAAAG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVGCPAP*TASPRK
Trigger: CTTTCGTGGAGAAGCTGTGCACGGAGCAGGGCAGCC...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGGCTGCCCTGCTCCGTaGACAGCTTCTCCACGAAAG +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREGCPAP*TASPRK
Trigger: CTTTCGTGGAGAAGCTGTGCACGGAGCAGGGCAGCC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTTGGGGTGGCTGCCCTaGTCCGTGCACAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGLGWLP*SVHSFS
Trigger: GGAGAAGCTGTGCACGGAGCAGGGCAGCCACCCCAA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAACCACTGTGCGGAACATaGCCTTCTTGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKPLCGT*PSWSWR
Trigger: CCTCCAAGACCAAGAAGGGCATGTTCCGCACAGTGG...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTATCAGCTTGCCCAGCTaGTCCTTGTACAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCISLPS*SLYSCP
Trigger: GGGGCAGCTGTACAAGGAGCAGCTGGGCAAGCTGAT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTATCAGCTTGCCCAGCTaGTCCTTGTACAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSISLPS*SLYSCP
Trigger: GGGGCAGCTGTACAAGGAGCAGCTGGGCAAGCTGAT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAAGTTGGGCGTGGTGTTaGGTAGCGTGGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSWAWC*VAWSSA
Trigger: AGCTGATGACCACGCTACGCAACACCACGCCCAACT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCGCCGGCAGATGCGAATaGCTTCCAGCACCCCATTGC +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFAGRCE*LPAPHC
Trigger: GCAATGGGGTGCTGGAAGGCATTCGCATCTGCCGGC...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGCCGGCAGATGCGAATaGCTTCCAGCACCCCATTGC +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVAGRCE*LPAPHC
Trigger: GCAATGGGGTGCTGGAAGGCATTCGCATCTGCCGGC...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAAGAAGATTTTGCTCTaGCCTATCCTGTATAAGTTG +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDKKILL*PILYKL
Trigger: CAACTTATACAGGATAGGGCAGAGCAAAATCTTCTT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGCGGTCAGCTGCTGCTaGCTCTTGGCAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVAVSCC*LLAKAF
Trigger: AAAGGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAACGCTCCTTGGTCTTCTaGAGTTCATCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKRSLVF*SSSSLA
Trigger: GGCCAAGGAGGATGAACTGCAGAAGACCAAGGAGCG...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTCGGTCAGCTGCGAGTaGTTCTGTTCCAGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLSVSCE*FCSSSL
Trigger: TAAGGAGCTGGAACAGAAGCACTCGCAGCTGACCGA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTCTCCTCGGTCAGCTaGGAGTGCTTCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKFSSVS*ECFCSS
Trigger: GCTGGAACAGAAGCACTCGCAGCTGACCGAGGAGAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGCTCTGTCTCTGCCTaGAGCTGTTCCTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSSVSA*SCSCSR
Trigger: CCTGCTACAGGAACAGCTGCAGGCAGAGACAGAGCT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCTTTCAGCCTGTAGCTaGTGGCCCCTGTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSLSACS*WPLSSS
Trigger: GGAGGAAGACAGGGGCCAGCAGCTACAGGCTGAAAG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATCAAGGTCCAGCATCTaGTGGGCCATCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSASRSSI*WAIFFL
Trigger: AAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTGA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATCAAGTTGCAGCTTCTaGCTGGCAGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSSCSF*LAASSS
Trigger: GGAGGAGGAAGCTGCCAGGCAGAAGCTGCAACTTGA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTCAAGTTGCAGCTTCTaGCTGGCAGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSSCSF*LAASSS
Trigger: GGAGGAGGAAGCTGCCAGGCAGAAGCTGCAACTTGA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGGAGGTCAGCGATCTaGTCGTGGAAGTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCWRSAI*SWKSLA
Trigger: TGCCAGCGACTTCCACGAGCAGATCGCTGACCTCCA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACTGCATCTTGAGCTCTaGGATCTGCGCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSILHLEL*DLRLEV
Trigger: GACCTCCAGGCGCAGATCGCAGAGCTCAAGATGCAG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCTTTCTCCAGCGTCTaGTTATTCTTGTCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSFSSV*LFLSRF
Trigger: GAACCTAGACAAGAATAAGCAGACGCTGGAGAAAGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATTGGACTGCAGCTCCTaGACCTGCGCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRELDCSS*TCASSF
Trigger: GAAGCTGGAGGCGCAGGTGCAGGAGCTGCAGTCCAA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTCGTCCAGCTGGTCTTaGAGGCTGTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFSSSWS*RLFRSS
Trigger: GGAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGCCAGAGCTTCCACGGTaGTGGCAAAGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTPELPR*WQSPAA
Trigger: AGCTGCAGGACTTTGCCAGCACCGTGGAAGCTCTGG...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCCAGAGCTTCCACGGTaGTGGCAAAGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSPELPR*WQSPAA
Trigger: AGCTGCAGGACTTTGCCAGCACCGTGGAAGCTCTGG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGCCTTCTCCTCGTACTaGTGGGTGAGGTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKAFSSY*WVRFSI
Trigger: GATCGAGAACCTCACCCAGCAGTACGAGGAGAAGGC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGCTCATGGACGTTCTTaGCCACGTCATCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKAHGRS*PRHPWS
Trigger: GCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATGGCCCTTGAGCGCCTaGATGTTGACTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREWPLSA*MLTSSR
Trigger: GCGGCTGGAAGTCAACATGCAGGCGCTCAAGGGCCA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCGCTGCCAGGGCACGTTaGTTTCGCTCGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSAARAR*FRSSSS
Trigger: ACTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGC...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTCCAGCTTCTTCTTTaGTGCAGCTGCCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKFQLLL*CSCQGT
Trigger: CGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCAGGTCCTCTTGTAGCTaGATGAGGTCTGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRRSSCS*MRSASK
Trigger: CTTGGAAGCAGACCTCATGCAGCTACAAGAGGACCT...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCACTGGCCAGCTCCTCTaGCAGTTCCTCCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSTGQLL*QFLLLE
Trigger: CTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGT...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTAGCTCGTTGCTGAGCTaGTCGGCCTGCTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFSSLLS*SACCVA
Trigger: AGCCACACAGCAGGCCGAGCAGCTCAGCAACGAGCT...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACATTCTTCTGGGCCGTaGTGCGCTCTGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREHSSGP*CALWPA
Trigger: AGCTGGCCACAGAGCGCAGCACGGCCCAGAAGAATG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCATTCTTCTGGGCCGTaGTGCGCTCTGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFHSSGP*CALWPA
Trigger: AGCTGGCCACAGAGCGCAGCACGGCCCAGAAGAATG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCATTCTTCTGGGCCGTaGTGCGCTCTGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRHSSGP*CALWPA
Trigger: AGCTGGCCACAGAGCGCAGCACGGCCCAGAAGAATG...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTGCCGCTCGAGCTGCTaGCGGGCACTCTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFCRSSC*RALSFF
Trigger: GAAGAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATTCTGCCGCTCGAGCTaGTGCCGGGCACTCTCATTC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREFCRSS*CRALSF
Trigger: GAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCAGAA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCTTCTGCCGCTCGAGCTaGTGCCGGGCACTCTCATTC +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFFCRSS*CRALSF
Trigger: GAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCAGAA...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTTCTGCCGCTCGAGCTaGTGCCGGGCACTCTCATTC +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFFCRSS*CRALSF
Trigger: GAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCAGAA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCCATCTCGTGGAGCTTaGTCCGGAGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVPSRGA*SGAPCS
Trigger: AGAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAAGCTTCTTGTCTTTCTaGTTCAGCGACTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSASFLSF*FSDLVA
Trigger: GGCCACCAAGTCGCTGAAGCAGAAAGACAAGAAGCT...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCGCCTGCTCCTTGTACTaGTCGGCCATCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFACSLY*SAILRS
Trigger: CGAGCGCAAGATGGCCGAGCAGTACAAGGAGCAGGC...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTGCCTTTCTCTGCCTaGTCCTTGTACTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKLPFSA*SLYCSA
Trigger: GGCCGAGCAGTACAAGGAGCAGGCAGAGAAAGGCAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAGGTTCCATTGAAGTCTaGGTCTCGAGTGTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAGSIEV*VSSVRF
Trigger: GAAACGGACACTCGAGACGCAGACTTCAATGGAACC...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAAAACTGTAGAAAGTTaGTTATTCACTGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDKTVES*LFTGLG
Trigger: ACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCGTTTCCTCGCCTGGTaGATCACTGCGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLRFLAW*ITAKFP
Trigger: AGGAAACTTCGCAGTGATGCACCAGGCGAGGAAACG...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGCCATGGTGCCTTGTTaGTCCCAGATCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKAMVPC*SQISNW
Trigger: CCAGTTGGAGATCTGGGACCAACAAGGCACCATGGC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGGCCCTTCTGCGCCATaGTGCCTTGTTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREGPSAP*CLVGPR
Trigger: TCTGGGACCAACAAGGCACCATGGCGCAGAAGGGCC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGGCCCTTCTGCGCCATaGTGCCTTGTTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRGPSAP*CLVGPR
Trigger: TCTGGGACCAACAAGGCACCATGGCGCAGAAGGGCC...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTCTTCTCCGAGTAGATaGGCAGGTGTTTATAGGGGT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSSPSR*AGVYRG
Trigger: ACCCCTATAAACACCTGCCCATCTACTCGGAGAAGA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCTCTTTCTTGCCCTTGTaGGAGGAGGCCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFSFLPL*EEATTA
Trigger: GGCCGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGA...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAATGTCCTCTCGTCTCTaGCTTGGCGAATTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKMSSRL*LGELPV
Trigger: CACGGGCAATTCGCCAAGCCAGAGACGAGAGGACAT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTATGTCCTCTCGTCTCTaGCTTGGCGAATTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVMSSRL*LGELPV
Trigger: CACGGGCAATTCGCCAAGCCAGAGACGAGAGGACAT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTTCTCATCTTCTCCTTaGCTCCAGCAATCATGTAGT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQFSSSP*LQQSCS
Trigger: ACTACATGATTGCTGGAGCCAAGGAGAAGATGAGAA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATGGGCACAAAGCCATTaGAGAGGAAGGTGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRWAQSH*RGRCSC
Trigger: ACAACTACACCTTCCTCTCCAATGGCTTTGTGCCCA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGCTCATATGTTGCCTTaGCCAAAGCCTCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNAHMLP*PKPLQQ
Trigger: TTGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGCTCATATGTTGCCTTaGCCAAAGCCTCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRAHMLP*PKPLQQ
Trigger: TTGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCGTCATCTTGGCCATCTaGTCCAGGCCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFVILAI*SRPTMR
Trigger: CCGCATCGTGGGCCTGGACCAGATGGCCAAGATGAC...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAAGCTCTCCGTCATCTTaGCCATCTGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSISSPSS*PSGPGP
Trigger: TGGGCCTGGACCAGATGGCCAAGATGACGGAGAGCT...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTGCCCTTCTTGGTCTTaGAGGCGCTGGGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVCPSWS*RRWAAS
Trigger: GCTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATGGTGTTGCGTAGCGTaGTCATCAGCTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKWCCVA*SSACPA
Trigger: AGCTGGGCAAGCTGATGACCACGCTACGCAACACCA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGCACGAAGTTGGGCGTaGTGTTGCGTAGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIARSWA*CCVAWS
Trigger: TGACCACGCTACGCAACACCACGCCCAACTTCGTGC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATGGCAAAAGCCTTTCTaGCCAAGTAGCCACGACACA +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAWQKPF*PSSHDT
Trigger: TGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGCTCGTGGAAGTCGCTaGCATCACCCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREARGSR*HHPPAS
Trigger: GGAAGCTGGAGGGTGATGCCAGCGACTTCCACGAGC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATCTGCGATCTGCGCCTaGAGGTCAGCGATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRESAICA*RSAICS
Trigger: CGAGCAGATCGCTGACCTCCAGGCGCAGATCGCAGA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTTTCATCGTCAAGCCTaGCCAGGGCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVFHRQA*PGPPAA
Trigger: AGCTGCAGGCGGCCCTGGCCAGGCTTGACGATGAAA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTTTCATCGTCAAGCCTaGCCAGGGCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFFHRQA*PGPPAA
Trigger: AGCTGCAGGCGGCCCTGGCCAGGCTTGACGATGAAA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTTTCATCGTCAAGCCTaGCCAGGGCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRFHRQA*PGPPAA
Trigger: AGCTGCAGGCGGCCCTGGCCAGGCTTGACGATGAAA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGAGTCCAGGTCCTCCTaGAGGTCTGAGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVESRSS*RSEMWP
Trigger: GGGCCACATCTCAGACCTCCAGGAGGACCTGGACTC...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTTTCAGCCTTGTTCCTaGCGGCCCGCTCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSFQPCS*RPALSP
Trigger: TGGACTCAGAGCGGGCCGCCAGGAACAAGGCTGAAA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCCCATCGCTGCACTTaGACTGCAGCTCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFPHRCT*TAAPAP
Trigger: AGGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTGGGTGTCCTGGAGCTaGGAACTGAGGGACGCCACG +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGWVSWS*ELRDAT
Trigger: CGTGGCGTCCCTCAGTTCCCAGCTCCAGGACACCCA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAGCTCCTGGGTGTCCTaGAGCTGGGAACTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRESSWVS*SWELRD
Trigger: GTCCCTCAGTTCCCAGCTCCAGGACACCCAGGAGCT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCATCTCCTCGTCCAGCTaGTCTTGCAGGCTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSISSSS*SCRLFR
Trigger: GCGGAACAGCCTGCAAGACCAGCTGGACGAGGAGAT...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGCTCCAGGTTCTGCTTaGCCTCCATCTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCAPGSA*PPSPRP
Trigger: TGGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTCTCGATCTCCTTCTaGAACCTCTTCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNFSISF*NLFFPS
Trigger: AGAGGGGAAGAAGAGGTTCCAGAAGGAGATCGAGAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCTGAAGCCTGTTCTTaGTCTTTTCCAGTTTATCAT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTAEACS*SFPVYH
Trigger: ATGATAAACTGGAAAAGACCAAGAACAGGCTTCAGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCTCATCCGCGTATTTaGAAGAGATGTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSHPRI*KRCFSP
Trigger: AGGAGAAAAACATCTCTTCCAAATACGCGGATGAGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCTTCCAGCCGCAGTTTaGCGTCCTCCGTGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRLPAAV*RPPWLA
Trigger: TGCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAG...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGATCCCTTTCGAACTaGCCCTTGAGCGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVRSLSN*PLSACM
Trigger: CATGCAGGCGCTCAAGGGCCAGTTCGAAAGGGATCT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGCTCGTCCCGGGCTTaGAGATCCCTTTCGAACTGG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCCSSRA*RSLSNW
Trigger: CCAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGCTCGTCCCGGGCTTaGAGATCCCTTTCGAACTGG +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTCSSRA*RSLSNW
Trigger: CCAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCGGACCCGGTCGCTCATaGCCTCCATGTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVGPGRS*PPCCPA
Trigger: AGCAGGGCAACATGGAGGCCATGAGCGACCGGGTCC...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGCACTCTCATTCTTCTaGGCCGTGCTGCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIALSFF*AVLRSV
Trigger: CACAGAGCGCAGCACGGCCCAGAAGAATGAGAGTGC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTGCACTCTCATTCTTCTaGGCCGTGCTGCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPALSFF*AVLRSV
Trigger: CACAGAGCGCAGCACGGCCCAGAAGAATGAGAGTGC...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCCGCCTGTTTCTCTCTaGCCTCCTGCTCGACCTGCT +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVPPVSL*PPARPA
Trigger: AGCAGGTCGAGCAGGAGGCCAGAGAGAAACAGGCGG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCGCCTGTTTCTCTCTaGCCTCCTGCTCGACCTGCT +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFPPVSL*PPARPA
Trigger: AGCAGGTCGAGCAGGAGGCCAGAGAGAAACAGGCGG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGCTTCAGCGACTTGGTaGCCGCCTGTTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCASATW*PPVSLW
Trigger: CCAGAGAGAAACAGGCGGCCACCAAGTCGCTGAAGC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCGCTTCAGCGACTTGGTaGCCGCCTGTTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSASATW*PPVSLW
Trigger: CCAGAGAGAAACAGGCGGCCACCAAGTCGCTGAAGC...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGGCTTCAGCGACTTGGTaGCCGCCTGTTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSASATW*PPVSLW
Trigger: CCAGAGAGAAACAGGCGGCCACCAAGTCGCTGAAGC...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTCTGCTTCAGCGACTTaGTGGCCGCCTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSASAT*WPPVSL
Trigger: GAGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTGGTGGTGGTGGTGGTaGTTGAGACAGGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVWWWWW*LRQGLC
Trigger: ACAGAGACCCTGTCTCAACCACCACCACCACCACCA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGGAATGAATTGGGAGTaGGGGCCGGCGGCACCCATT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREGMNWE*GPAAPI
Trigger: AATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACCTGACGTGAGAAGTTaGAAAGGTTTGCAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRPDVRS*KGLQVR
Trigger: CCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATCCTGCTCCCCTCCGTaGGAGCAGCGTCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRESCSPP*EQRLLF
Trigger: GAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATCCGTAGGCAAAAGATaGGCCTTGCGTGATACTTGT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSESVGKR*ALRDTC
Trigger: ACAAGTATCACGCAAGGCCCATCTTTTGCCTACGGA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR TCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGGTGTTTATAGGGGTTaGCCACCACGCAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTGVYRG*PPRRRG
Trigger: GCCTCTTCTGCGTGGTGGTCAACCCCTATAAACACC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGGTGTTTATAGGGGTTaGCCACCACGCAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIGVYRG*PPRRRG
Trigger: GCCTCTTCTGCGTGGTGGTCAACCCCTATAAACACC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTTTCCAGCTCTCCCGTaGTACTTGTGTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRFPALP*YLCLSC
Trigger: GCAAGAAAGACACAAGTATCACGGGAGAGCTGGAAA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTGTTTCTTTCCTTCTTaGAGACGATATTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTCFFPS*RRYFQA
Trigger: AGCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCAGGTGGCAAACTTTCTaGGCAGCTGTGTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLRWQTF*AAVLSG
Trigger: GCCAGATAACACAGCTGCTCAGAAAGTTTGCCACCT...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACTTTGTTCACGCGGGTaGGTATCCAGCGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSILCSRG*VSSGKG
Trigger: GCCTTTTCCGCTGGATACTCACCCGCGTGAACAAAG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGTCGGAGGAGGCATTaGGCAGGGAAGTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCCRRRH*AGKSRC
Trigger: ACAACGTGACTTCCCTGCTCAATGCCTCCTCCGACA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGTCGGAGGAGGCATTaGGCAGGGAAGTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTCRRRH*AGKSRC
Trigger: ACAACGTGACTTCCCTGCTCAATGCCTCCTCCGACA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTGTCGGAGGAGGCATTaGGCAGGGAAGTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSCRRRH*AGKSRC
Trigger: ACAACGTGACTTCCCTGCTCAATGCCTCCTCCGACA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTGTTCTGATCATCCATaGCCAGGATCTCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRCSDHP*PGSHPP
Trigger: TGGAGGATGAGATCCTGGTCATGGATGATCAGAACA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGATAGTTTATTGTTCTaGTCATCCATGACCAGGATC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQDSLLF*SSMTRI
Trigger: GATCCTGGTCATGGATGATCAGAACAATAAACTATC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCCTGGCGGCCCGCTCTaGGTCCAGGTCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDPGGPL*VQVLLE
Trigger: CTCCAGGAGGACCTGGACTCAGAGCGGGCCGCCAGG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTCGCCTTGGCCCTCTTaGACTGCTCAAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFSPWPS*TAQAAL
Trigger: CAGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCGGAGAGCTGGATGTTaGGAGTGGAGATGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRRRAGC*EWRCGA
Trigger: AGCGCCACATCTCCACTCTCAACATCCAGCTCTCCG...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCCTCGTACTGCTGGGTaGGGTTCTCGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSPRTAG*GSRSPS
Trigger: AGAAGGAGATCGAGAACCTCACCCAGCAGTACGAGG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCGTCATCCTTGGAGCTaGCCAGGTCTTCCATTTCGG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCRHPWS*PGLPFR
Trigger: CCGAAATGGAAGACCTGGTCAGCTCCAAGGATGACG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGTTTGCGTAGCTGCTTaGTGGCTTCCTCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVVCVAA*WLPPSP
Trigger: AGGGGAGGGAGGAAGCCATCAAGCAGCTACGCAAAC...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCTTGCAGGTTAGGGAATaGATTGGGAGTGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFLQVRE*IGSGGR
Trigger: CCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAA...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACCTTCTGCGCCATGGTaGCTTGTTGGTCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIPSAPW*LVGPRS
Trigger: AGATCTGGGACCAACAAGGCACCATGGCGCAGAAGG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACTCATCATCCTGGGCTaGTGGGATGGGCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRELIILG*WDGHKA
Trigger: GGCTTTGTGCCCATCCCAGCAGCCCAGGATGATGAG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCACTGTGCGGAACATaGCCTTCTTGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPPLCGT*PSWSWR
Trigger: CCTCCAAGACCAAGAAGGGCATGTTCCGCACAGTGG...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGCCACTGTGCGGAACATaGCCTTCTTGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSPLCGT*PSWSWR
Trigger: CCTCCAAGACCAAGAAGGGCATGTTCCGCACAGTGG...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCATCAGCTTGCCCAGCTaGTCCTTGTACAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVISLPS*SLYSCP
Trigger: GGGGCAGCTGTACAAGGAGCAGCTGGGCAAGCTGAT...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTAGTTGGGCGTGGTGTTaGGTAGCGTGGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSWAWC*VAWSSA
Trigger: AGCTGATGACCACGCTACGCAACACCACGCCCAACT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGGCGGTCAGCTGCTGCTaGCTCTTGGCAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSAVSCC*LLAKAF
Trigger: AAAGGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGC...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGCGGTCAGCTGCTGCTaGCTCTTGGCAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSAVSCC*LLAKAF
Trigger: AAAGGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGC...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTATGGCGGTCAGCTGCTaGTGCCTCTTGGCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRMAVSC*CLLAKA
Trigger: GGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGCCAT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACGCTCCTTGGTCTTCTaGAGTTCATCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIRSLVF*SSSSLA
Trigger: GGCCAAGGAGGATGAACTGCAGAAGACCAAGGAGCG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGCGCTCCTTGGTCTTCTaGAGTTCATCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSRSLVF*SSSSLA
Trigger: GGCCAAGGAGGATGAACTGCAGAAGACCAAGGAGCG...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTTCTCTGCCTTCTGCTaGCGCTCCTTGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCFSAFC*RSLVFC
Trigger: GCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCTCCTCGGTCAGCTaGGAGTGCTTCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTFSSVS*ECFCSS
Trigger: GCTGGAACAGAAGCACTCGCAGCTGACCGAGGAGAA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGAGCTCTGTCTCTGCCTaGAGCTGTTCCTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTSSVSA*SCSCSR
Trigger: CCTGCTACAGGAACAGCTGCAGGCAGAGACAGAGCT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCGGGCCTCCATCTCATaGAGTATCTCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFRASIS*SISSSS
Trigger: GGAGCTGGAGGAGATACTGCATGAGATGGAGGCCCG...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACGGGCCTCCATCTCATaGAGTATCTCCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRERASIS*SISSSS
Trigger: GGAGCTGGAGGAGATACTGCATGAGATGGAGGCCCG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCTTTCAGCCTGTAGCTaGTGGCCCCTGTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVLSACS*WPLSSS
Trigger: GGAGGAAGACAGGGGCCAGCAGCTACAGGCTGAAAG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCAAGTTGCAGCTTCTaGCTGGCAGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSSCSF*LAASSS
Trigger: GGAGGAGGAAGCTGCCAGGCAGAAGCTGCAACTTGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTGGAGGTCAGCGATCTaGTCGTGGAAGTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVWRSAI*SWKSLA
Trigger: TGCCAGCGACTTCCACGAGCAGATCGCTGACCTCCA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATTGAGCTCTGCGATCTaGGCCTGGAGGTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRELSSAI*AWRSAI
Trigger: GATCGCTGACCTCCAGGCGCAGATCGCAGAGCTCAA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCTGCATCTTGAGCTCTaGGATCTGCGCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVLHLEL*DLRLEV
Trigger: GACCTCCAGGCGCAGATCGCAGAGCTCAAGATGCAG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCTTATGTTCCACCTCCTaGTTGGCCTGGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFLCSTS*LAWPRT
Trigger: GGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACATAA...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTCGTCCAGCTGGTCTTaGAGGCTGTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGSSSWS*RLFRSS
Trigger: GGAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACCAGAGCTTCCACGGTaGTGGCAAAGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREPELPR*WQSPAA
Trigger: AGCTGCAGGACTTTGCCAGCACCGTGGAAGCTCTGG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGCCTTCTCCTCGTACTaGTGGGTGAGGTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTAFSSY*WVRFSI
Trigger: GATCGAGAACCTCACCCAGCAGTACGAGGAGAAGGC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGCTCATGGACGTTCTTaGCCACGTCATCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIAHGRS*PRHPWS
Trigger: GCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGCTCATGGACGTTCTTaGCCACGTCATCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTAHGRS*PRHPWS
Trigger: GCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCTCTTCTCCTCATTCTaGTCGTCCCGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSLFSSF*SSRAWR
Trigger: TCTCCAAGCCCGGGACGAGCAGAATGAGGAGAAGAG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCTCTTCTCCTCATTCTaGTCGTCCCGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPLFSSF*SSRAWR
Trigger: TCTCCAAGCCCGGGACGAGCAGAATGAGGAGAAGAG...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGCTGCCAGGGCACGTTaGTTTCGCTCGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREAARAR*FRSSSS
Trigger: ACTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACTTCTTTGCTGCAGCTaGCAGGGCACGTTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSILLCCS*QGTLLS
Trigger: CGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCAGCTTCTTCTTTGCTaGAGCTGCCAGGGCACGTTG +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSQLLLC*SCQGTL
Trigger: CAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCAGCTTCTTCTTTGCTaGAGCTGCCAGGGCACGTTG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCQLLLC*SCQGTL
Trigger: CAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAACTGGCCAGCTCCTCTaGCAGTTCCTCCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRETGQLL*QFLLLE
Trigger: CTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCAGCTCGTTGCTGAGCTaGTCGGCCTGCTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVSSLLS*SACCVA
Trigger: AGCCACACAGCAGGCCGAGCAGCTCAGCAACGAGCT...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCCATCTCGTGGAGCTTaGTCCGGAGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCPSRGA*SGAPCS
Trigger: AGAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGCCATCTCGTGGAGCTTaGTCCGGAGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTPSRGA*SGAPCS
Trigger: AGAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGG...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCCATCTCGTGGAGCTTaGTCCGGAGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSPSRGA*SGAPCS
Trigger: AGAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCACTGCTCGGCCATCTTaGGCTCGTCCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVTARPS*ARPPPA
Trigger: TGCAGGTGGAGGACGAGCGCAAGATGGCCGAGCAGT...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTTGCCTTTCTCTGCCTaGTCCTTGTACTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCLPFSA*SLYCSA
Trigger: GGCCGAGCAGTACAAGGAGCAGGCAGAGAAAGGCAA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGCATTGCCTTTCTCTaGCTGCTCCTTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKGIAFL*LLLVLL
Trigger: GAGCAGTACAAGGAGCAGGCAGAGAAAGGCAATGCC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTAGCTGCCTCTTGAGCTaGTTGACCCTGGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSCLLS*LTLALP
Trigger: AGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCAGCT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTAGCTGCCTCTTGAGCTaGTTGACCCTGGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPSCLLS*LTLALP
Trigger: AGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCAGCT...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTAGCTGCCTCTTGAGCTaGTTGACCCTGGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSSCLLS*LTLALP
Trigger: AGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCAGCT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGAGCTTGCTCTTGAGTaGGTTCACCTCGCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREELALE*VHLAAH
Trigger: ATGGGCCGCGAGGTGAACGCACTCAAGAGCAAGCTC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGAGCTTGCTCTTGAGTaGGTTCACCTCGCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRELALE*VHLAAH
Trigger: ATGGGCCGCGAGGTGAACGCACTCAAGAGCAAGCTC...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACAGTCTGCTGGGTTTTaGTTTGTTCTGGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRQSAGF*FVLGCC
Trigger: ACAACAACCCAGAACAAAGCAAAACCCAGCAGACTG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCAGTCTGCTGGGTTTTaGTTTGTTCTGGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNQSAGF*FVLGCC
Trigger: ACAACAACCCAGAACAAAGCAAAACCCAGCAGACTG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATTGCCCAGGCTGGAGTaGAATGATGCAATTATAGCT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSELPRLE*NDAIIA
Trigger: AGCTATAATTGCATCATTGCACTCCAGCCTGGGCAA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGCAAAAGATGGGCCTTaGGTGATACTTGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNAKDGP*VILVSF
Trigger: GAAAGACACAAGTATCACGCAAGGCCCATCTTTTGC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCGCCATGGTGCCTTGTTaGTCCCAGATCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSAMVPC*SQISNW
Trigger: CCAGTTGGAGATCTGGGACCAACAAGGCACCATGGC...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTGGCCCTTCTGCGCCATaGTGCCTTGTTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGGPSAP*CLVGPR
Trigger: TCTGGGACCAACAAGGCACCATGGCGCAGAAGGGCC...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCATCGTCACTGAGTTaGCCCTTCTGCGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTSSSLS*PFCAMV
Trigger: CACCATGGCGCAGAAGGGCCAACTCAGTGACGATGA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTATGTCCTCTCGTCTCTaGCTTGGCGAATTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCMSSRL*LGELPV
Trigger: CACGGGCAATTCGCCAAGCCAGAGACGAGAGGACAT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGATGTCCTCTCGTCTCTaGCTTGGCGAATTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSMSSRL*LGELPV
Trigger: CACGGGCAATTCGCCAAGCCAGAGACGAGAGGACAT...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCATGTCCTCTCGTCTCTaGCTTGGCGAATTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSMSSRL*LGELPV
Trigger: CACGGGCAATTCGCCAAGCCAGAGACGAGAGGACAT...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACTTCTCATCTTCTCCTTaGCTCCAGCAATCATGTAGT +
Preference number: 4 (lower is better)
Translates to: LGLLQLMDVLAHVILGADFSSSP*LQQSCS
Trigger: ACTACATGATTGCTGGAGCCAAGGAGAAGATGAGAA...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACCTGGGCTGCTGGGATaGGCACAAAGCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREPGLLG*AQSHWR
Trigger: TCTCCAATGGCTTTGTGCCCATCCCAGCAGCCCAGG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAATCATCCTGGGCTGCTaGGATGGGCACAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKIILGC*DGHKAI
Trigger: AATGGCTTTGTGCCCATCCCAGCAGCCCAGGATGAT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGCGGGTCCATATTCTTaGTCAGCCAGGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIAGPYS*SARHSH
Trigger: ATGCGAGTGCCTGGCTGACCAAGAATATGGACCCGC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGCGGGTCCATATTCTTaGTCAGCCAGGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSAGPYS*SARHSH
Trigger: ATGCGAGTGCCTGGCTGACCAAGAATATGGACCCGC...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGCGGGTCCATATTCTTaGTCAGCCAGGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTAGPYS*SARHSH
Trigger: ATGCGAGTGCCTGGCTGACCAAGAATATGGACCCGC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGGTGTTGCGTAGCGTaGTCATCAGCTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTWCCVA*SSACPA
Trigger: AGCTGGGCAAGCTGATGACCACGCTACGCAACACCA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGCACGAAGTTGGGCGTaGTGTTGCGTAGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVARSWA*CCVAWS
Trigger: TGACCACGCTACGCAACACCACGCCCAACTTCGTGC...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGCCACGACACATCGCCTaGAAGGCCATGATGACATCG +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSPRHIA*KAMMTS
Trigger: CGATGTCATCATGGCCTTCCAGGCGATGTGTCGTGG...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCCACGACACATCGCCTaGAAGGCCATGATGACATCG +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSPRHIA*KAMMTS
Trigger: CGATGTCATCATGGCCTTCCAGGCGATGTGTCGTGG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCAGCGATCTGCTCGTaGAAGTCGCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSAICS*KSLASP
Trigger: GGGTGATGCCAGCGACTTCCACGAGCAGATCGCTGA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTTTCAGCCTTGTTCCTaGCGGCCCGCTCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRFQPCS*RPALSP
Trigger: TGGACTCAGAGCGGGCCGCCAGGAACAAGGCTGAAA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCAGCTCCTGGGTGTCCTaGAGCTGGGAACTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVSSWVS*SWELRD
Trigger: GTCCCTCAGTTCCCAGCTCCAGGACACCCAGGAGCT...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTATCTCCTCGTCCAGCTaGTCTTGCAGGCTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRISSSS*SCRLFR
Trigger: GCGGAACAGCCTGCAAGACCAGCTGGACGAGGAGAT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGCTCCAGGTTCTGCTTaGCCTCCATCTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREAPGSA*PPSPRP
Trigger: TGGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGCTCCAGGTTCTGCTTaGCCTCCATCTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRAPGSA*PPSPRP
Trigger: TGGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGC...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATTTCGAGTCGGAGAGCTaGATGTTGAGAGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: KVLQLLLRVGELDVESGDFESES*MLRVEM
Trigger: CATCTCCACTCTCAACATCCAGCTCTCCGACTCGAA...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGAGCTTCCACGGTGCTaGCAAAGTCCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCELPRC*QSPAAS
Trigger: AGAAGCTGCAGGACTTTGCCAGCACCGTGGAAGCTC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTCTCCTCGTACTGCTaGGTGAGGTTCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKFSSYC*VRFSIS
Trigger: GGAGATCGAGAACCTCACCCAGCAGTACGAGGAGAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCTCATCCGCGTATTTaGAAGAGATGTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSHPRI*KRCFSP
Trigger: AGGAGAAAAACATCTCTTCCAAATACGCGGATGAGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTTCTCATCCGCGTATTTaGAAGAGATGTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPSHPRI*KRCFSP
Trigger: AGGAGAAAAACATCTCTTCCAAATACGCGGATGAGA...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGCTCGAGTTCCTCTTTaGCTTCCAAGGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLARVPL*LPRPLQ
Trigger: TTGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTAGATCCCTTTCGAACTaGCCCTTGAGCGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSRSLSN*PLSACM
Trigger: CATGCAGGCGCTCAAGGGCCAGTTCGAAAGGGATCT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTGCTCGTCCCGGGCTTaGAGATCCCTTTCGAACTGG +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRCSSRA*RSLSNW
Trigger: CCAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTTCCCGACAGGCTACTaGCCAGCTCCTCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRFPTGY*PAPLPV
Trigger: AACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTTCTGCTTCAGCGACTTaGTGGCCGCCTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSSASAT*WPPVSL
Trigger: GAGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGA...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTTGGCGTTGATGCGCTaGGACTCCTCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGLALMR*DSSSAS
Trigger: GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCAGGCTGGAGGGTGGTaGTTTTTATATTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNQAGGW*FLYSLC
Trigger: ACACAAGGAATATAAAAACCACCACCCTCCAGCCTG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGCCCAGGCTGGAGGGTaGTGGTTTTTATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLAQAGG*WFLYSL
Trigger: CAAGGAATATAAAAACCACCACCCTCCAGCCTGGGC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAGGGACCGGTTACCGTaGATATGTTTTTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQRDRLP*ICFSKN
Trigger: GTTTTTAGAAAAACATATCCACGGTAACCGGTCCCT...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTCCTGCTCCCCTCCGTaGGAGCAGCGTCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGSCSPP*EQRLLF
Trigger: GAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR TCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAACATCTTTCCCAACCGTaGCCTTCTTGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKHLSQP*PSCHSP
Trigger: TGGAGAATGGCAAGAAGGTCACGGTTGGGAAAGATG...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGAATTTGCCGAATCGTaGGGAGTTGTCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLEFAES*GVVVLH
Trigger: GTGAAGAACGACAACTCCTCACGATTCGGCAAATTC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAAGGTGGCAAACTTTCTaGGCAGCTGTGTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKRWQTF*AAVLSG
Trigger: GCCAGATAACACAGCTGCTCAGAAAGTTTGCCACCT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCAGGGCATTGTTCTTCTaGGCGATTTCATCGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLRALFF*AISSSS
Trigger: GCTTGACGATGAAATCGCTCAGAAGAACAATGCCCT...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACCTCGTACTGCTGGGTaGGGTTCTCGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREPRTAG*GSRSPS
Trigger: AGAAGGAGATCGAGAACCTCACCCAGCAGTACGAGG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCGTACTGCTGGGTaGGGTTCTCGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRPRTAG*GSRSPS
Trigger: AGAAGGAGATCGAGAACCTCACCCAGCAGTACGAGG...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCCTCGTACTGCTGGGTaGGGTTCTCGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVPRTAG*GSRSPS
Trigger: AGAAGGAGATCGAGAACCTCACCCAGCAGTACGAGG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACGTCATCCTTGGAGCTaGCCAGGTCTTCCATTTCGG +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRERHPWS*PGLPFR
Trigger: CCGAAATGGAAGACCTGGTCAGCTCCAAGGATGACG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTATGGCAGAGTCGGCCTaGAGCTCCAGGTCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGMAESA*SSRSFR
Trigger: CCTGAAAGACCTGGAGCTTCAGGCCGACTCTGCCAT...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTTGGCCTTGGTTCCATTaGAGTCTGCGTCTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPWPWFH*SLRLEC
Trigger: ACACTCGAGACGCAGACTTCAATGGAACCAAGGCCA...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGGCCTTGGTTCCATTaGAGTCTGCGTCTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCWPWFH*SLRLEC
Trigger: ACACTCGAGACGCAGACTTCAATGGAACCAAGGCCA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAAATTCTTGTATAGATaGGGTTTTACTACGTTGCCC +
Preference number: 4 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNKFLYR*GFTTLP
Trigger: GGGCAACGTAGTAAAACCTCATCTATACAAGAATTT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAAAGGCGCTCATATGTTaGCTTGGCCAAAGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKKALIC*LGQSLY
Trigger: GTAGAGGCTTTGGCCAAGGCAACATATGAGCGCCTT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCCACTGTGCGGAACATaGCCTTCTTGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVPLCGT*PSWSWR
Trigger: CCTCCAAGACCAAGAAGGGCATGTTCCGCACAGTGG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCAGTTGGGCGTGGTGTTaGGTAGCGTGGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFSWAWC*VAWSSA
Trigger: AGCTGATGACCACGCTACGCAACACCACGCCCAACT...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAAGAAGATTTTGCTCTaGCCTATCCTGTATAAGTTG +
Preference number: 4 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQKKILL*PILYKL
Trigger: CAACTTATACAGGATAGGGCAGAGCAAAATCTTCTT...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTAAGAAGATTTTGCTCTaGCCTATCCTGTATAAGTTG +
Preference number: 4 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPKKILL*PILYKL
Trigger: CAACTTATACAGGATAGGGCAGAGCAAAATCTTCTT...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCGCTCCTTGGTCTTCTaGAGTTCATCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFRSLVF*SSSSLA
Trigger: GGCCAAGGAGGATGAACTGCAGAAGACCAAGGAGCG...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCAGCTCTGTCTCTGCCTaGAGCTGTTCCTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFSSVSA*SCSCSR
Trigger: CCTGCTACAGGAACAGCTGCAGGCAGAGACAGAGCT...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCAAGTTGCAGCTTCTaGCTGGCAGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRSSCSF*LAASSS
Trigger: GGAGGAGGAAGCTGCCAGGCAGAAGCTGCAACTTGA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCCGAGGTCTCGCTTCTaGTTTTCAGCCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCPRSRF*FSALFL
Trigger: CAGGAACAAGGCTGAAAAGCAGAAGCGAGACCTCGG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGCCGAGGTCTCGCTTCTaGTTTTCAGCCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSPRSRF*FSALFL
Trigger: CAGGAACAAGGCTGAAAAGCAGAAGCGAGACCTCGG...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCCTGCTGAGTGGCTGTaGTGTCCAGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFPAEWL*CPVCLP
Trigger: TGGAAGACACACTGGACAGCACAGCCACTCAGCAGG...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTGGCCCTCTTGAACTaGTCAAGCTGCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTLALLN*SSCSVS
Trigger: GCTCACAGAGCAGCTTGAGCAGTTCAAGAGGGCCAA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGTGCTGGCAAAGTCCTaGAGCTTCTTCTTCGAGTCG +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTVLAKS*SFFFES
Trigger: CGACTCGAAGAAGAAGCTGCAGGACTTTGCCAGCAC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGCCTTCTCCTCGTACTaGTGGGTGAGGTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREAFSSY*WVRFSI
Trigger: GATCGAGAACCTCACCCAGCAGTACGAGGAGAAGGC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCGCCTTCTCCTCGTACTaGTGGGTGAGGTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFAFSSY*WVRFSI
Trigger: GATCGAGAACCTCACCCAGCAGTACGAGGAGAAGGC...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGCTCATGGACGTTCTTaGCCACGTCATCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREAHGRS*PRHPWS
Trigger: GCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACTTCTTTGCTGCAGCTaGCAGGGCACGTTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRELLCCS*QGTLLS
Trigger: CGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTTCCAGCTTCTTCTTTaGTGCAGCTGCCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRFQLLL*CSCQGT
Trigger: CGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTTCCAGCTTCTTCTTTaGTGCAGCTGCCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFFQLLL*CSCQGT
Trigger: CGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAAGGTCCTCTTGTAGCTaGATGAGGTCTGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKRSSCS*MRSASK
Trigger: CTTGGAAGCAGACCTCATGCAGCTACAAGAGGACCT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCACTGGCCAGCTCCTCTaGCAGTTCCTCCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVTGQLL*QFLLLE
Trigger: CTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGT...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTTGCCTTTCTCTGCCTaGTCCTTGTACTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRLPFSA*SLYCSA
Trigger: GGCCGAGCAGTACAAGGAGCAGGCAGAGAAAGGCAA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGGCATTGCCTTTCTCTaGCTGCTCCTTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTGIAFL*LLLVLL
Trigger: GAGCAGTACAAGGAGCAGGCAGAGAAAGGCAATGCC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGGCATTGCCTTTCTCTaGCTGCTCCTTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCGIAFL*LLLVLL
Trigger: GAGCAGTACAAGGAGCAGGCAGAGAAAGGCAATGCC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGTTTTCTTGCCGTGGTaGAAAACTGTAGAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNVFLPW*KTVESC
Trigger: GCAACTTTCTACAGTTTTGCACCACGGCAAGAAAAC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGCACTTGGTGAACTGTaGGTGTCTGAGGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVALGEL*VSEVWK
Trigger: TTTCCACACCTCAGACACGCACAGTTCACCAAGTGC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCAGGGTGTAAACAGTaGAGCATTCCTGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSGCKQ*SIPAPL
Trigger: GAGGGGAGCAGGAATGCTGCACTGTTTACACCCTGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCATCGTCACTGAGTTaGCCCTTCTGCGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSSSLS*PFCAMV
Trigger: CACCATGGCGCAGAAGGGCCAACTCAGTGACGATGA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCATCGTCACTGAGTTaGCCCTTCTGCGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRSSSLS*PFCAMV
Trigger: CACCATGGCGCAGAAGGGCCAACTCAGTGACGATGA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTCTTCTCCGAGTAGATaGGCAGGTGTTTATAGGGGT +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLSSPSR*AGVYRG
Trigger: ACCCCTATAAACACCTGCCCATCTACTCGGAGAAGA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTCTCATCTTCTCCTTaGCTCCAGCAATCATGTAGT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNFSSSP*LQQSCS
Trigger: ACTACATGATTGCTGGAGCCAAGGAGAAGATGAGAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGATCATCCTGGGCTGCTaGGATGGGCACAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTIILGC*DGHKAI
Trigger: AATGGCTTTGTGCCCATCCCAGCAGCCCAGGATGAT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTATCATCCTGGGCTGCTaGGATGGGCACAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSIILGC*DGHKAI
Trigger: AATGGCTTTGTGCCCATCCCAGCAGCCCAGGATGAT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGCCTCCACGGTTTCCTaGAACATCTCATCATCCTGG +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIASTVS*NISSSW
Trigger: CCAGGATGATGAGATGTTCCAGGAAACCGTGGAGGC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTGCGGGTCCATATTCTTaGTCAGCCAGGCACTCGCAT +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFAGPYS*SARHSH
Trigger: ATGCGAGTGCCTGGCTGACCAAGAATATGGACCCGC...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTAGCTCTCCGTCATCTTaGCCATCTGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGSSPSS*PSGPGP
Trigger: TGGGCCTGGACCAGATGGCCAAGATGACGGAGAGCT...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATGGTGTTGCGTAGCGTaGTCATCAGCTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREWCCVA*SSACPA
Trigger: AGCTGGGCAAGCTGATGACCACGCTACGCAACACCA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCCACGACACATCGCCTaGAAGGCCATGATGACATCG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVPRHIA*KAMMTS
Trigger: CGATGTCATCATGGCCTTCCAGGCGATGTGTCGTGG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACCACGACACATCGCCTaGAAGGCCATGATGACATCG +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREPRHIA*KAMMTS
Trigger: CGATGTCATCATGGCCTTCCAGGCGATGTGTCGTGG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGTCTGCTGCCGCTCCTTaGTCTTCTGCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSSAAAP*SSAVHP
Trigger: AGGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGA...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATATCTGCTGCCGCTCCTTaGTCTTCTGCAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSISAAAP*SSAVHP
Trigger: AGGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGA...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATACCTCCTGCTTGGCCTaGCCCAGGACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDTSCLA*PRTRSS
Trigger: GGAGCTGCGGGTCCTGGGCCAGGCCAAGCAGGAGGT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGACCTCCTGCTTGGCCTaGCCCAGGACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLTSCLA*PRTRSS
Trigger: GGAGCTGCGGGTCCTGGGCCAGGCCAAGCAGGAGGT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTTCTCCTCGTACTGCTaGGTGAGGTTCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCFSSYC*VRFSIS
Trigger: GGAGATCGAGAACCTCACCCAGCAGTACGAGGAGAA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCTCCTCGTACTGCTaGGTGAGGTTCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTFSSYC*VRFSIS
Trigger: GGAGATCGAGAACCTCACCCAGCAGTACGAGGAGAA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTGCTTCTTTTCCAGGTTaGACACGAGTTGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPASFPG*TRVAAG
Trigger: ACCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGC...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGGCTTCTTTTCCAGGTTaGACACGAGTTGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSASFPG*TRVAAG
Trigger: ACCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGC...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAGATCCCTTTCGAACTaGCCCTTGAGCGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRERSLSN*PLSACM
Trigger: CATGCAGGCGCTCAAGGGCCAGTTCGAAAGGGATCT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTGCTCGTCCCGGGCTTaGAGATCCCTTTCGAACTGG +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVCSSRA*RSLSNW
Trigger: CCAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTTCCCGACAGGCTACTaGCCAGCTCCTCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVFPTGY*PAPLPV
Trigger: AACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGAGCTCCTCCTCCAGCTaGGCGATCCGGGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSSSSS*AIRASR
Trigger: CCTGGAGGCCCGGATCGCCCAGCTGGAGGAGGAGCT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGCTCGGCCTGCTGTGTaGCTTTGCGGACCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDARPAV*LCGPGR
Trigger: GCGACCGGGTCCGCAAAGCCACACAGCAGGCCGAGC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATGGTGGTGGTGGTGGTaGTTGAGACAGGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREWWWWW*LRQGLC
Trigger: ACAGAGACCCTGTCTCAACCACCACCACCACCACCA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
3UTR CAA 72 bp AAATTTCCTCTGCTTCTTTTCCAGGTTGGACACGAGTaGCCGCTGGTTGTCCAAATCAACAACCAGGTCGTC +
Preference number: 4 (lower is better)
Translates to: KFPLLLFQVGHE*PLVVQINNQVV
Trigger: GACGACCTGGTTGTTGATTTGGACAACCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGCAGAGGAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCATCTTTCCCAACCGTaGCCTTCTTGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCHLSQP*PSCHSP
Trigger: TGGAGAATGGCAAGAAGGTCACGGTTGGGAAAGATG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCATCTTTCCCAACCGTaGCCTTCTTGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSHLSQP*PSCHSP
Trigger: TGGAGAATGGCAAGAAGGTCACGGTTGGGAAAGATG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGAGGTGGCAAACTTTCTaGGCAGCTGTGTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTRWQTF*AAVLSG
Trigger: GCCAGATAACACAGCTGCTCAGAAAGTTTGCCACCT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTTTGTTCACGCGGGTaGGTATCCAGCGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGLCSRG*VSSGKG
Trigger: GCCTTTTCCGCTGGATACTCACCCGCGTGAACAAAG...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTCCCAGCATAATGGATaGTGGAGAACTCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLSQHNG*WRTQSC
Trigger: ACAAGACTGAGTTCTCCATCATCCATTATGCTGGGA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTGGCCTTGGTTCCATTaGAGTCTGCGTCTCGAGTGT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRWPWFH*SLRLEC
Trigger: ACACTCGAGACGCAGACTTCAATGGAACCAAGGCCA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACTCAAAGGCCTGACGTaGGAAGTTGGAAAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSILKGLT*EVGKVC
Trigger: GCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR TCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCTATTGGGGAAATCCTaGGAGCACCGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVLLGKS*EHRPST
Trigger: TGTGGAAGGACGGTGCTCTCAGGATTTCCCCAATAG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGCTGCCTCGAAGCCCTaGTTCTCCGAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDAASKP*FSEGTQ
Trigger: CTGGGTCCCCTCGGAGAAGCAGGGCTTCGAGGCAGC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGCTGCCTCGAAGCCCTaGTTCTCCGAGGGGACCCAG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLAASKP*FSEGTQ
Trigger: CTGGGTCCCCTCGGAGAAGCAGGGCTTCGAGGCAGC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTACTTGTGTCTTTCTTaGCCTTGTGGGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCYLCLS*PCGRRP
Trigger: TGGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTTACTTGTGTCTTTCTTaGCCTTGTGGGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPYLCLS*PCGRRP
Trigger: TGGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTA...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTTACTTGTGTCTTTCTTaGCCTTGTGGGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSYLCLS*PCGRRP
Trigger: TGGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTA...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGCTGAAACCCATGATTaGCATGGCCTCCACGGTTTC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREAETHD*HGLHGF
Trigger: GAAACCGTGGAGGCCATGGCAATCATGGGTTTCAGC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTCAATATGGATAGCTaGTCCTCCTCGCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKFNMDS*SSSLKP
Trigger: GGGTTTCAGCGAGGAGGAGCAGCTATCCATATTGAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTACGATATTTCCAAGCTaGAGGACCGATGATACCACC +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVTIFPS*RTDDTT
Trigger: GGTGGTATCATCGGTCCTGCAGCTTGGAAATATCGT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTCGGAAGAAGATTTTaGTCTGCCCTATCCTGTATA +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNFGRRF*SALSCI
Trigger: TATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATTCGGAAGAAGATTTTaGTCTGCCCTATCCTGTATA +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRFGRRF*SALSCI
Trigger: TATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTTCTCTGCCTTCTGCTaGCGCTCCTTGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVFSAFC*RSLVFC
Trigger: GCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGGTCAGCTGCGAGTaGTTCTGTTCCAGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSVSCE*FCSSSL
Trigger: TAAGGAGCTGGAACAGAAGCACTCGCAGCTGACCGA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTTCTCCTCGGTCAGCTaGGAGTGCTTCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVFSSVS*ECFCSS
Trigger: GCTGGAACAGAAGCACTCGCAGCTGACCGAGGAGAA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCAAGGTCCAGCATCTaGTGGGCCATCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSRSSI*WAIFFL
Trigger: AAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCAAGTTGCAGCTTCTaGCTGGCAGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVSSCSF*LAASSS
Trigger: GGAGGAGGAAGCTGCCAGGCAGAAGCTGCAACTTGA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCCGAGGTCTCGCTTCTaGTTTTCAGCCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFPRSRF*FSALFL
Trigger: CAGGAACAAGGCTGAAAAGCAGAAGCGAGACCTCGG...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCCGAGGTCTCGCTTCTaGTTTTCAGCCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVPRSRF*FSALFL
Trigger: CAGGAACAAGGCTGAAAAGCAGAAGCGAGACCTCGG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTTGAACTGCTCAAGCTaGTCTGTGAGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFLNCSS*SVSSST
Trigger: GGTGGAGGAGCTCACAGAGCAGCTTGAGCAGTTCAA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTTGGCCCTCTTGAACTaGTCAAGCTGCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRLALLN*SSCSVS
Trigger: GCTCACAGAGCAGCTTGAGCAGTTCAAGAGGGCCAA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGTGCTGGCAAAGTCCTaGAGCTTCTTCTTCGAGTCG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVVLAKS*SFFFES
Trigger: CGACTCGAAGAAGAAGCTGCAGGACTTTGCCAGCAC...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGAGGTTGGACACGAGTTaGCGCTGGTTGTCCAAATCA +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTRLDTS*RWLSKS
Trigger: TGATTTGGACAACCAGCGGCAACTCGTGTCCAACCT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCTTCTCCTCATTCTaGTCGTCCCGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGLFSSF*SSRAWR
Trigger: TCTCCAAGCCCGGGACGAGCAGAATGAGGAGAAGAG...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCAGCTTCTTCTTTGCTaGAGCTGCCAGGGCACGTTG +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGQLLLC*SCQGTL
Trigger: CAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTG...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCAGGTCCTCTTGTAGCTaGATGAGGTCTGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSRSSCS*MRSASK
Trigger: CTTGGAAGCAGACCTCATGCAGCTACAAGAGGACCT...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAAGGTCCTCTTGTAGCTaGATGAGGTCTGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIRSSCS*MRSASK
Trigger: CTTGGAAGCAGACCTCATGCAGCTACAAGAGGACCT...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCGAGGTCCGCTTGTTTaGGAGCCCTCTCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLRGPLV*EPSQRR
Trigger: CCGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTAGCTTCTTGTCTTTCTaGTTCAGCGACTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSFLSF*FSDLVA
Trigger: GGCCACCAAGTCGCTGAAGCAGAAAGACAAGAAGCT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGGCATTGCCTTTCTCTaGCTGCTCCTTGTACTGCTC +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVGIAFL*LLLVLL
Trigger: GAGCAGTACAAGGAGCAGGCAGAGAAAGGCAATGCC...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCTCCTCAGAACCATCTaGATTTTCAATAACTCTACG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNLLRTI*IFNNST
Trigger: CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGGTTCCATTGAAGTCTaGGTCTCGAGTGTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCGSIEV*VSSVRF
Trigger: GAAACGGACACTCGAGACGCAGACTTCAATGGAACC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGGTTCCATTGAAGTCTaGGTCTCGAGTGTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTGSIEV*VSSVRF
Trigger: GAAACGGACACTCGAGACGCAGACTTCAATGGAACC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATCATGTAAACAGAATTaGCAGGGACCGGTTACCGTG +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSCKQN*QGPVTV
Trigger: CACGGTAACCGGTCCCTGGCAATTCTGTTTACATGA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGAAGTTGGAAAGGTTTaGAGGTTAGGGAATGAATTG +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNEVGKV*RLGNEL
Trigger: CAATTCATTCCCTAACCTGCAAACCTTTCCAACTTC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCAGGGTGTAAACAGTaGAGCATTCCTGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRSGCKQ*SIPAPL
Trigger: GAGGGGAGCAGGAATGCTGCACTGTTTACACCCTGA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCAGGGTGTAAACAGTaGAGCATTCCTGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSGCKQ*SIPAPL
Trigger: GAGGGGAGCAGGAATGCTGCACTGTTTACACCCTGA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCGTTTCCTCGCCTGGTaGATCACTGCGAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFRFLAW*ITAKFP
Trigger: AGGAAACTTCGCAGTGATGCACCAGGCGAGGAAACG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATCTTCTCCGAGTAGATaGGCAGGTGTTTATAGGGGT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSSPSR*AGVYRG
Trigger: ACCCCTATAAACACCTGCCCATCTACTCGGAGAAGA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTCTTCTCCGAGTAGATaGGCAGGTGTTTATAGGGGT +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSSPSR*AGVYRG
Trigger: ACCCCTATAAACACCTGCCCATCTACTCGGAGAAGA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGCTCTCGTCTCTGGCTTaGCGAATTGCCCGTGATTTT +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTLSSLA*RIARDF
Trigger: AAAATCACGGGCAATTCGCCAAGCCAGAGACGAGAG...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTTCTCATCTTCTCCTTaGCTCCAGCAATCATGTAGT +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRFSSSP*LQQSCS
Trigger: ACTACATGATTGCTGGAGCCAAGGAGAAGATGAGAA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTATCATCCTGGGCTGCTaGGATGGGCACAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRIILGC*DGHKAI
Trigger: AATGGCTTTGTGCCCATCCCAGCAGCCCAGGATGAT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGCCTCCACGGTTTCCTaGAACATCTCATCATCCTGG +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREASTVS*NISSSW
Trigger: CCAGGATGATGAGATGTTCCAGGAAACCGTGGAGGC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTGGTGTTGCGTAGCGTaGTCATCAGCTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVWCCVA*SSACPA
Trigger: AGCTGGGCAAGCTGATGACCACGCTACGCAACACCA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGGCAAAAGCCTTTCTaGCCAAGTAGCCACGACACA +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTWQKPF*PSSHDT
Trigger: TGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTGTCACCTGCAGCAGTaGCTTCACTTTGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVCHLQQ*LHFGEK
Trigger: CTTTTCACCAAAGTGAAGCCACTGCTGCAGGTGACA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTGAGCTTCCACGGTGCTaGCAAAGTCCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGELPRC*QSPAAS
Trigger: AGAAGCTGCAGGACTTTGCCAGCACCGTGGAAGCTC...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTCTCGATCTCCTTCTaGAACCTCTTCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKFSISF*NLFFPS
Trigger: AGAGGGGAAGAAGAGGTTCCAGAAGGAGATCGAGAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGCTGAAGCCTGTTCTTaGTCTTTTCCAGTTTATCAT +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRAEACS*SFPVYH
Trigger: ATGATAAACTGGAAAAGACCAAGAACAGGCTTCAGC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAGCTGAAGCCTGTTCTTaGTCTTTTCCAGTTTATCAT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEAEACS*SFPVYH
Trigger: ATGATAAACTGGAAAAGACCAAGAACAGGCTTCAGC...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGACACGAGTTGCCGCTaGTTGTCCAAATCAACAACC +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIDTSCR*LSKSTT
Trigger: GGTTGTTGATTTGGACAACCAGCGGCAACTCGTGTC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTCTCATCCGCGTATTTaGAAGAGATGTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSHPRI*KRCFSP
Trigger: AGGAGAAAAACATCTCTTCCAAATACGCGGATGAGA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGCTCGAGTTCCTCTTTaGCTTCCAAGGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCARVPL*LPRPLQ
Trigger: TTGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACTGCTTCCAAGCTCTTaGCTTTCTTCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSALLPSS*LSSHSL
Trigger: AAGAGAATGAGAAGAAAGCCAAGAGCTTGGAAGCAG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCTGCTTCCAAGCTCTTaGCTTTCTTCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRLLPSS*LSSHSL
Trigger: AAGAGAATGAGAAGAAAGCCAAGAGCTTGGAAGCAG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGCCCCCTCCATCTCGTaGAGCTTGCTCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLAPSIS*SLLRSS
Trigger: GGAGCTCCGGAGCAAGCTCCACGAGATGGAGGGGGC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTCACCTCGCGGCCCATaGCCTCGTTGCTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDSPRGP*PRCSPW
Trigger: CCACGGAGAGCAACGAGGCCATGGGCCGCGAGGTGA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGCCCAGGCTGGAGGGTaGTGGTTTTTATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIAQAGG*WFLYSL
Trigger: CAAGGAATATAAAAACCACCACCCTCCAGCCTGGGC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCTACGTTGCCCAGGCTaGAGGGTGGTGGTTTTTATA +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCLRCPG*RVVVFI
Trigger: TATAAAAACCACCACCCTCCAGCCTGGGCAACGTAG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCTACGTTGCCCAGGCTaGAGGGTGGTGGTTTTTATA +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSLRCPG*RVVVFI
Trigger: TATAAAAACCACCACCCTCCAGCCTGGGCAACGTAG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR CCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGTCTCGTTTCCTCGCCTaGTGCATCACTGCGAAGTTT +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSSRFLA*CITAKF
Trigger: AAACTTCGCAGTGATGCACCAGGCGAGGAAACGAGA...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR TCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCATCTTTCCCAACCGTaGCCTTCTTGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFHLSQP*PSCHSP
Trigger: TGGAGAATGGCAAGAAGGTCACGGTTGGGAAAGATG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCATCTTTCCCAACCGTaGCCTTCTTGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRHLSQP*PSCHSP
Trigger: TGGAGAATGGCAAGAAGGTCACGGTTGGGAAAGATG...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTTTCCAGCTCTCCCGTaGTACTTGTGTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCFPALP*YLCLSC
Trigger: GCAAGAAAGACACAAGTATCACGGGAGAGCTGGAAA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300036.6
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGAATTTGCCGAATCGTaGGGAGTTGTCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCEFAES*GVVVLH
Trigger: GTGAAGAACGACAACTCCTCACGATTCGGCAAATTC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGAATTTGCCGAATCGTaGGGAGTTGTCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSEFAES*GVVVLH
Trigger: GTGAAGAACGACAACTCCTCACGATTCGGCAAATTC...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGGAAGGTGTAGTTGTTaGAGCCCTCCAAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTGRCSC*SPPKAS
Trigger: ACTTGCTTTTGGAGGGCTTCAACAACTACACCTTCC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAAGCTGCAGGACCGATaGTACCACCTTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSKLQDR*YHLQYG
Trigger: TCCATATTGAAGGTGGTATCATCGGTCCTGCAGCTT...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR TCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTAAGCTGCAGGACCGATaGTACCACCTTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSKLQDR*YHLQYG
Trigger: TCCATATTGAAGGTGGTATCATCGGTCCTGCAGCTT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTGTTTCTTTCCTTCTTaGAGACGATATTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNCFFPS*RRYFQA
Trigger: AGCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATGTTTCTTTCCTTCTTaGAGACGATATTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRCFFPS*RRYFQA
Trigger: AGCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATCCCAGCATAATGGATaGTGGAGAACTCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSQHNG*WRTQSC
Trigger: ACAAGACTGAGTTCTCCATCATCCATTATGCTGGGA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTGTGGACTTTGTCATTaGGCTCCGCCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLCGLCH*APPGPA
Trigger: AGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGCTTCCATTTCGGCTTTaGGCATTTTGTTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSLPFRL*AFCWSA
Trigger: AGCGGACCAACAAAATGCTCAAAGCCGAAATGGAAG...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCTTCCATTTCGGCTTTaGGCATTTTGTTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCLPFRL*AFCWSA
Trigger: AGCGGACCAACAAAATGCTCAAAGCCGAAATGGAAG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTCCTGCGGTTGGCGTTaGTGCGCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSCGWR*CAGTPP
Trigger: AGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTCCTGCGGTTGGCGTTaGTGCGCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSCGWR*CAGTPP
Trigger: AGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATAAATTCTTGTATAGATaGGGTTTTACTACGTTGCCC +
Preference number: 4 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNKFLYR*GFTTLP
Trigger: GGGCAACGTAGTAAAACCTCATCTATACAAGAATTT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATACTTGTGTCTTTCTTaGCCTTGTGGGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREYLCLS*PCGRRP
Trigger: TGGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATCACTGTTTTGGCGTTaGCGAAAGCCTCCAGAATCG +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRESLFWR*RKPPES
Trigger: CGATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTCACTGTTTTGGCGTTaGCGAAAGCCTCCAGAATCG +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFSLFWR*RKPPES
Trigger: CGATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCGCTGAAACCCATGATTaGCATGGCCTCCACGGTTTC +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVAETHD*HGLHGF
Trigger: GAAACCGTGGAGGCCATGGCAATCATGGGTTTCAGC...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTTCAATATGGATAGCTaGTCCTCCTCGCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCFNMDS*SSSLKP
Trigger: GGGTTTCAGCGAGGAGGAGCAGCTATCCATATTGAA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCAATATGGATAGCTaGTCCTCCTCGCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTFNMDS*SSSLKP
Trigger: GGGTTTCAGCGAGGAGGAGCAGCTATCCATATTGAA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCACGATATTTCCAAGCTaGAGGACCGATGATACCACC +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSTIFPS*RTDDTT
Trigger: GGTGGTATCATCGGTCCTGCAGCTTGGAAATATCGT...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGACGATATTTCCAAGCTaGAGGACCGATGATACCACC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTTIFPS*RTDDTT
Trigger: GGTGGTATCATCGGTCCTGCAGCTTGGAAATATCGT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAAGGCGCTCATATGTTaGCTTGGCCAAAGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREKALIC*LGQSLY
Trigger: GTAGAGGCTTTGGCCAAGGCAACATATGAGCGCCTT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTAAGGCGCTCATATGTTaGCTTGGCCAAAGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFKALIC*LGQSLY
Trigger: GTAGAGGCTTTGGCCAAGGCAACATATGAGCGCCTT...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGGTCCAGGCCCACGATaGGGTCCACGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLGPGPR*GPRPST
Trigger: TGTGGAAGGACGTGGACCGCATCGTGGGCCTGGACC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTCGGTCAGCTGCGAGTaGTTCTGTTCCAGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGSVSCE*FCSSSL
Trigger: TAAGGAGCTGGAACAGAAGCACTCGCAGCTGACCGA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCAAGGTCCAGCATCTaGTGGGCCATCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRSRSSI*WAIFFL
Trigger: AAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTGA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCCCGAGGTCTCGCTTCTaGTTTTCAGCCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVPRSRF*FSALFL
Trigger: CAGGAACAAGGCTGAAAAGCAGAAGCGAGACCTCGG...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTCGCTGCACTTGGACTaGAGCTCCTGCACCTGCGCC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSLHLD*SSCTCA
Trigger: GGCGCAGGTGCAGGAGCTGCAGTCCAAGTGCAGCGA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCCCGCTCCCCATCGCTaGACTTGGACTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDPAPHR*TWTAAP
Trigger: AGGAGCTGCAGTCCAAGTGCAGCGATGGGGAGCGGG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCTGAGCTGCTCGGCCTaGTGTGTGGCTTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLSCSA*CVALRT
Trigger: GGTCCGCAAAGCCACACAGCAGGCCGAGCAGCTCAG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCAGCTTCTTGTCTTTCTaGTTCAGCGACTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSFLSF*FSDLVA
Trigger: GGCCACCAAGTCGCTGAAGCAGAAAGACAAGAAGCT...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGGCCCATGGCCTCGTTaGTCTCCGTGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDGPWPR*SPWPHP
Trigger: TGGATGAGGCCACGGAGAGCAACGAGGCCATGGGCC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGGCCCATGGCCTCGTTaGTCTCCGTGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDGPWPR*SPWPHP
Trigger: TGGATGAGGCCACGGAGAGCAACGAGGCCATGGGCC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCTCCTCAGAACCATCTaGATTTTCAATAACTCTACG +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRLLRTI*IFNNST
Trigger: CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACTCCTCAGAACCATCTaGATTTTCAATAACTCTACG +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSALLRTI*IFNNST
Trigger: CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAAAAACTGTAGAAAGTTaGTTATTCACTGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LALVPLKSASRVSVSSSEKTVES*LFTGLG
Trigger: ACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCATGTAAACAGAATTaGCAGGGACCGGTTACCGTG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSCKQN*QGPVTV
Trigger: CACGGTAACCGGTCCCTGGCAATTCTGTTTACATGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGAAGTTGGAAAGGTTTaGAGGTTAGGGAATGAATTG +
Preference number: 4 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPREVGKV*RLGNEL
Trigger: CAATTCATTCCCTAACCTGCAAACCTTTCCAACTTC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGCACTTGGTGAACTGTaGGTGTCTGAGGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVALGEL*VSEVWK
Trigger: TTTCCACACCTCAGACACGCACAGTTCACCAAGTGC...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR CCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCTCTCGTCTCTGGCTTaGCGAATTGCCCGTGATTTT +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFLSSLA*RIARDF
Trigger: AAAATCACGGGCAATTCGCCAAGCCAGAGACGAGAG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCTCTCGTCTCTGGCTTaGCGAATTGCCCGTGATTTT +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVLSSLA*RIARDF
Trigger: AAAATCACGGGCAATTCGCCAAGCCAGAGACGAGAG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTGGGCACAAAGCCATTaGAGAGGAAGGTGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCWAQSH*RGRCSC
Trigger: ACAACTACACCTTCCTCTCCAATGGCTTTGTGCCCA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTGGGCACAAAGCCATTaGAGAGGAAGGTGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSWAQSH*RGRCSC
Trigger: ACAACTACACCTTCCTCTCCAATGGCTTTGTGCCCA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTGCCTCCACGGTTTCCTaGAACATCTCATCATCCTGG +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGASTVS*NISSSW
Trigger: CCAGGATGATGAGATGTTCCAGGAAACCGTGGAGGC...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGCTCATATGTTGCCTTaGCCAAAGCCTCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTAHMLP*PKPLQQ
Trigger: TTGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGGCTCATATGTTGCCTTaGCCAAAGCCTCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSAHMLP*PKPLQQ
Trigger: TTGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGC...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTTGTCACCTGCAGCAGTaGCTTCACTTTGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSCHLQQ*LHFGEK
Trigger: CTTTTCACCAAAGTGAAGCCACTGCTGCAGGTGACA...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAGGTCCAGCATCTGCTaGGCCATCTTCTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRERSSIC*AIFFLS
Trigger: TGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCAGGTCCAGCATCTGCTaGGCCATCTTCTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFRSSIC*AIFFLS
Trigger: TGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCT...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTAGGTCCAGCATCTGCTaGGCCATCTTCTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRRSSIC*AIFFLS
Trigger: TGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCGCTCCTCCTCCAGCTaGCGCAGCTTCGTAGACACG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLRSSSS*RSFVDT
Trigger: CGTGTCTACGAAGCTGCGCCAGCTGGAGGAGGAGCG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATTCGAGTCGGAGAGCTaGATGTTGAGAGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREFESES*MLRVEM
Trigger: CATCTCCACTCTCAACATCCAGCTCTCCGACTCGAA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTTCTCCTCGTACTGCTaGGTGAGGTTCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGFSSYC*VRFSIS
Trigger: GGAGATCGAGAACCTCACCCAGCAGTACGAGGAGAA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTTCTCCTCGTACTGCTaGGTGAGGTTCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVFSSYC*VRFSIS
Trigger: GGAGATCGAGAACCTCACCCAGCAGTACGAGGAGAA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGACACGAGTTGCCGCTaGTTGTCCAAATCAACAACC +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVDTSCR*LSKSTT
Trigger: GGTTGTTGATTTGGACAACCAGCGGCAACTCGTGTC...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGACACGAGTTGCCGCTaGTTGTCCAAATCAACAACC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRDTSCR*LSKSTT
Trigger: GGTTGTTGATTTGGACAACCAGCGGCAACTCGTGTC...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCGCTTCTTTTCCAGGTTaGACACGAGTTGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVASFPG*TRVAAG
Trigger: ACCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGC...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGCTCGAGTTCCTCTTTaGCTTCCAAGGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVARVPL*LPRPLQ
Trigger: TTGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGC...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTGCTCGAGTTCCTCTTTaGCTTCCAAGGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFARVPL*LPRPLQ
Trigger: TTGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGC...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGGACCCGGTCGCTCATaGCCTCCATGTTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDGPGRS*PPCCPA
Trigger: AGCAGGGCAACATGGAGGCCATGAGCGACCGGGTCC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCCTCGTTGCTCTCCGTaGCCTCATCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDPRCSP*PHPAPA
Trigger: AGCGGGAGCTGGATGAGGCCACGGAGAGCAACGAGG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCCTCGTTGCTCTCCGTaGCCTCATCCAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLPRCSP*PHPAPA
Trigger: AGCGGGAGCTGGATGAGGCCACGGAGAGCAACGAGG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAAGGGACCGGTTACCGTaGATATGTTTTTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: VPLKSASRVSVSSSEPSARDRLP*ICFSKN
Trigger: GTTTTTAGAAAAACATATCCACGGTAACCGGTCCCT...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCCTGACGTGAGAAGTTaGAAAGGTTTGCAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCPDVRS*KGLQVR
Trigger: CCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCCGTAGGCAAAAGATaGGCCTTGCGTGATACTTGT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSVGKR*ALRDTC
Trigger: ACAAGTATCACGCAAGGCCCATCTTTTGCCTACGGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGAATTTGCCGAATCGTaGGGAGTTGTCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLREFAES*GVVVLH
Trigger: GTGAAGAACGACAACTCCTCACGATTCGGCAAATTC...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTGGAAGGTGTAGTTGTTaGAGCCCTCCAAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFGRCSC*SPPKAS
Trigger: ACTTGCTTTTGGAGGGCTTCAACAACTACACCTTCC...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGGAAGGTGTAGTTGTTaGAGCCCTCCAAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVGRCSC*SPPKAS
Trigger: ACTTGCTTTTGGAGGGCTTCAACAACTACACCTTCC...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAAGCTGCAGGACCGATaGTACCACCTTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREKLQDR*YHLQYG
Trigger: TCCATATTGAAGGTGGTATCATCGGTCCTGCAGCTT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCCCAGCATAATGGATaGTGGAGAACTCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSQHNG*WRTQSC
Trigger: ACAAGACTGAGTTCTCCATCATCCATTATGCTGGGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTTCCCAGCATAATGGATaGTGGAGAACTCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPSQHNG*WRTQSC
Trigger: ACAAGACTGAGTTCTCCATCATCCATTATGCTGGGA...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTTCCCAGCATAATGGATaGTGGAGAACTCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSSQHNG*WRTQSC
Trigger: ACAAGACTGAGTTCTCCATCATCCATTATGCTGGGA...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCTTCCATTTCGGCTTTaGGCATTTTGTTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRLPFRL*AFCWSA
Trigger: AGCGGACCAACAAAATGCTCAAAGCCGAAATGGAAG...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTTTGCTTGTAGAAGCTaGTTTTCCAGCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFFACRS*FSSSPV
Trigger: CACGGGAGAGCTGGAAAAGCAGCTTCTACAAGCAAA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTTTGCTTGTAGAAGCTaGTTTTCCAGCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVFACRS*FSSSPV
Trigger: CACGGGAGAGCTGGAAAAGCAGCTTCTACAAGCAAA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCACTGTTTTGGCGTTaGCGAAAGCCTCCAGAATCG +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVSLFWR*RKPPES
Trigger: CGATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTACGATATTTCCAAGCTaGAGGACCGATGATACCACC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRTIFPS*RTDDTT
Trigger: GGTGGTATCATCGGTCCTGCAGCTTGGAAATATCGT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCAAGGCGCTCATATGTTaGCTTGGCCAAAGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVKALIC*LGQSLY
Trigger: GTAGAGGCTTTGGCCAAGGCAACATATGAGCGCCTT...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCTTCCAGCACCCCATTaGACCGCAGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLPAPH*TAAAPA
Trigger: TGCTGGAGCAGCTGCGGTGCAATGGGGTGCTGGAAG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCAGGTTGGACACGAGTTaGCGCTGGTTGTCCAAATCA +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVRLDTS*RWLSKS
Trigger: TGATTTGGACAACCAGCGGCAACTCGTGTCCAACCT...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTGGCCCTTGAGCGCCTaGATGTTGACTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLWPLSA*MLTSSR
Trigger: GCGGCTGGAAGTCAACATGCAGGCGCTCAAGGGCCA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCATTCTTCTGGGCCGTaGTGCGCTCTGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDHSSGP*CALWPA
Trigger: AGCTGGCCACAGAGCGCAGCACGGCCCAGAAGAATG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTGCCGCTCGAGCTGCTaGCGGGCACTCTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLCRSSC*RALSFF
Trigger: GAAGAATGAGAGTGCCCGGCAGCAGCTCGAGCGGCA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGCCTCCTGCTCGACCTaGTCCTCCAGCTGTGCAATC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDASCST*SSSCAI
Trigger: GATTGCACAGCTGGAGGAGCAGGTCGAGCAGGAGGC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATACTGCTCGGCCATCTTaGGCTCGTCCTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDTARPS*ARPPPA
Trigger: TGCAGGTGGAGGACGAGCGCAAGATGGCCGAGCAGT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGCCTGCTCCTTGTACTaGTCGGCCATCTTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLACSLY*SAILRS
Trigger: CGAGCGCAAGATGGCCGAGCAGTACAAGGAGCAGGC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCAGTCTGCTGGGTTTTaGTTTGTTCTGGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCQSAGF*FVLGCC
Trigger: ACAACAACCCAGAACAAAGCAAAACCCAGCAGACTG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCAGTCTGCTGGGTTTTaGTTTGTTCTGGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPQSAGF*FVLGCC
Trigger: ACAACAACCCAGAACAAAGCAAAACCCAGCAGACTG...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACAGTCTGCTGGGTTTTaGTTTGTTCTGGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIQSAGF*FVLGCC
Trigger: ACAACAACCCAGAACAAAGCAAAACCCAGCAGACTG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCGCACTTGGTGAACTGTaGGTGTCTGAGGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVALGEL*VSEVWK
Trigger: TTTCCACACCTCAGACACGCACAGTTCACCAAGTGC...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR GCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTGCAAAAGATGGGCCTTaGGTGATACTTGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPAKDGP*VILVSF
Trigger: GAAAGACACAAGTATCACGCAAGGCCCATCTTTTGC...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTCTTTCTTGCCCTTGTaGGAGGAGGCCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSFLPL*EEATTA
Trigger: GGCCGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTCTTTCTTGCCCTTGTaGGAGGAGGCCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDSFLPL*EEATTA
Trigger: GGCCGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTCTCATCTTCTCCTTaGCTCCAGCAATCATGTAGT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKFSSSP*LQQSCS
Trigger: ACTACATGATTGCTGGAGCCAAGGAGAAGATGAGAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGTCATCTTGGCCATCTaGTCCAGGCCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDVILAI*SRPTMR
Trigger: CCGCATCGTGGGCCTGGACCAGATGGCCAAGATGAC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGTCATCTTGGCCATCTaGTCCAGGCCCACGATGCGG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDVILAI*SRPTMR
Trigger: CCGCATCGTGGGCCTGGACCAGATGGCCAAGATGAC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCGTTGGCGGAACTCCTaGAAGACGATCCGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDRWRNS*KTIRLG
Trigger: CCCCAACCGGATCGTCTTCCAGGAGTTCCGCCAACG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACTATCCTGTATAAGTTaGGGTCAAGTTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSILSCIS*GQVPGL
Trigger: AAGCCCTGGAACTTGACCCCAACTTATACAGGATAG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTGGCAAAAGCCTTTCTaGCCAAGTAGCCACGACACA +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVWQKPF*PSSHDT
Trigger: TGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGCTCGTGGAAGTCGCTaGCATCACCCTCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDARGSR*HHPPAS
Trigger: GGAAGCTGGAGGGTGATGCCAGCGACTTCCACGAGC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTTCATCGTCAAGCCTaGCCAGGGCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDFHRQA*PGPPAA
Trigger: AGCTGCAGGCGGCCCTGGCCAGGCTTGACGATGAAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTTCATCGTCAAGCCTaGCCAGGGCCGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLFHRQA*PGPPAA
Trigger: AGCTGCAGGCGGCCCTGGCCAGGCTTGACGATGAAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGAGTCCAGGTCCTCCTaGAGGTCTGAGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDESRSS*RSEMWP
Trigger: GGGCCACATCTCAGACCTCCAGGAGGACCTGGACTC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGAGTCCAGGTCCTCCTaGAGGTCTGAGATGTGGCCC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDESRSS*RSEMWP
Trigger: GGGCCACATCTCAGACCTCCAGGAGGACCTGGACTC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCCCCATCGCTGCACTTaGACTGCAGCTCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDPHRCT*TAAPAP
Trigger: AGGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATAGCTCCTGGGTGTCCTaGAGCTGGGAACTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDSSWVS*SWELRD
Trigger: GTCCCTCAGTTCCCAGCTCCAGGACACCCAGGAGCT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGAGCTCCTGGGTGTCCTaGAGCTGGGAACTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSSWVS*SWELRD
Trigger: GTCCCTCAGTTCCCAGCTCCAGGACACCCAGGAGCT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTTCGAGTCGGAGAGCTaGATGTTGAGAGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVFESES*MLRVEM
Trigger: CATCTCCACTCTCAACATCCAGCTCTCCGACTCGAA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTTCTCGATCTCCTTCTaGAACCTCTTCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVFSISF*NLFFPS
Trigger: AGAGGGGAAGAAGAGGTTCCAGAAGGAGATCGAGAA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATTCTCGATCTCCTTCTaGAACCTCTTCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREFSISF*NLFFPS
Trigger: AGAGGGGAAGAAGAGGTTCCAGAAGGAGATCGAGAA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTCTCATCCGCGTATTTaGAAGAGATGTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLSHPRI*KRCFSP
Trigger: AGGAGAAAAACATCTCTTCCAAATACGCGGATGAGA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCTTCCAGCCGCAGTTTaGCGTCCTCCGTGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLPAAV*RPPWLA
Trigger: TGCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCCGCCTGTTTCTCTCTaGCCTCCTGCTCGACCTGCT +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDPPVSL*PPARPA
Trigger: AGCAGGTCGAGCAGGAGGCCAGAGAGAAACAGGCGG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCAGGCTGGAGGGTGGTaGTTTTTATATTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCQAGGW*FLYSLC
Trigger: ACACAAGGAATATAAAAACCACCACCCTCCAGCCTG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCAGGCTGGAGGGTGGTaGTTTTTATATTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSQAGGW*FLYSLC
Trigger: ACACAAGGAATATAAAAACCACCACCCTCCAGCCTG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGGAATGAATTGGGAGTaGGGGCCGGCGGCACCCATT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLGMNWE*GPAAPI
Trigger: AATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTCCTGCTCCCCTCCGTaGGAGCAGCGTCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDSCSPP*EQRLLF
Trigger: GAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTGGAAGGTGTAGTTGTTaGAGCCCTCCAAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGGRCSC*SPPKAS
Trigger: ACTTGCTTTTGGAGGGCTTCAACAACTACACCTTCC...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTGTTTCTTTCCTTCTTaGAGACGATATTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLCFFPS*RRYFQA
Trigger: AGCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTGTTCTGATCATCCATaGCCAGGATCTCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGCSDHP*PGSHPP
Trigger: TGGAGGATGAGATCCTGGTCATGGATGATCAGAACA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTAGGGCATTGTTCTTCTaGGCGATTTCATCGTCAAGC +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGRALFF*AISSSS
Trigger: GCTTGACGATGAAATCGCTCAGAAGAACAATGCCCT...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCAGGGCATTGTTCTTCTaGGCGATTTCATCGTCAAGC +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVRALFF*AISSSS
Trigger: GCTTGACGATGAAATCGCTCAGAAGAACAATGCCCT...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTCGCCTTGGCCCTCTTaGACTGCTCAAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSPWPS*TAQAAL
Trigger: CAGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCGGAGAGCTGGATGTTaGGAGTGGAGATGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDRRAGC*EWRCGA
Trigger: AGCGCCACATCTCCACTCTCAACATCCAGCTCTCCG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCGGAGAGCTGGATGTTaGGAGTGGAGATGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDRRAGC*EWRCGA
Trigger: AGCGCCACATCTCCACTCTCAACATCCAGCTCTCCG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTTGCAGGTTAGGGAATaGATTGGGAGTGGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLQVRE*IGSGGR
Trigger: CCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTGAATTCTCAAAGGCCTaGCGTGAGAAGTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGEFSKA*REKLER
Trigger: CCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTC...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR TCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCCTTTTCAATTCATGTaGCTACAGAAGGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCPFQFM*LQKALG
Trigger: ACCAAGTGCCTTCTGTAGTCACATGAATTGAAAAGG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCTGAGTTGGCCCTTCTaGGCCATGGTGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLSWPF*AMVPCW
Trigger: CCAACAAGGCACCATGGCGCAGAAGGGCCAACTCAG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCTGAGTTGGCCCTTCTaGGCCATGGTGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLSWPF*AMVPCW
Trigger: CCAACAAGGCACCATGGCGCAGAAGGGCCAACTCAG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCCCGATCTTGAAGCATaGTCCGGTAGGCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDPDLEA*SGRPCL
Trigger: CAGACACGGCCTACCGGAGCATGCTTCAAGATCGGG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCTCATCATCCTGGGCTaGTGGGATGGGCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLIILG*WDGHKA
Trigger: GGCTTTGTGCCCATCCCAGCAGCCCAGGATGATGAG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCTCATCATCCTGGGCTaGTGGGATGGGCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLIILG*WDGHKA
Trigger: GGCTTTGTGCCCATCCCAGCAGCCCAGGATGATGAG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGATCAGCTTGCCCAGCTaGTCCTTGTACAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLISLPS*SLYSCP
Trigger: GGGGCAGCTGTACAAGGAGCAGCTGGGCAAGCTGAT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATATCAGCTTGCCCAGCTaGTCCTTGTACAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDISLPS*SLYSCP
Trigger: GGGGCAGCTGTACAAGGAGCAGCTGGGCAAGCTGAT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTTCGGAAGAAGATTTTaGTCTGCCCTATCCTGTATA +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVFGRRF*SALSCI
Trigger: TATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATATGGCGGTCAGCTGCTaGTGCCTCTTGGCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDMAVSC*CLLAKA
Trigger: GGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGCCAT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGATGGCGGTCAGCTGCTaGTGCCTCTTGGCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLMAVSC*CLLAKA
Trigger: GGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGCCAT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCTTTCAGCCTGTAGCTaGTGGCCCCTGTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLSACS*WPLSSS
Trigger: GGAGGAAGACAGGGGCCAGCAGCTACAGGCTGAAAG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTGGAGGTCAGCGATCTaGTCGTGGAAGTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLWRSAI*SWKSLA
Trigger: TGCCAGCGACTTCCACGAGCAGATCGCTGACCTCCA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTGGAGGTCAGCGATCTaGTCGTGGAAGTCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDWRSAI*SWKSLA
Trigger: TGCCAGCGACTTCCACGAGCAGATCGCTGACCTCCA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTTGAGCTCTGCGATCTaGGCCTGGAGGTCAGCGATC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLSSAI*AWRSAI
Trigger: GATCGCTGACCTCCAGGCGCAGATCGCAGAGCTCAA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATATCTTTCTCCAGCGTCTaGTTATTCTTGTCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSISFSSV*LFLSRF
Trigger: GAACCTAGACAAGAATAAGCAGACGCTGGAGAAAGA...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTTATGTTCCACCTCCTaGTTGGCCTGGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLCSTS*LAWPRT
Trigger: GGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACATAA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTATGTTCCACCTCCTaGTTGGCCTGGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLCSTS*LAWPRT
Trigger: GGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACATAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCCAGAGCTTCCACGGTaGTGGCAAAGTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLPELPR*WQSPAA
Trigger: AGCTGCAGGACTTTGCCAGCACCGTGGAAGCTCTGG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGCTGCCAGGGCACGTTaGTTTCGCTCGTCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDAARAR*FRSSSS
Trigger: ACTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATACTGGCCAGCTCCTCTaGCAGTTCCTCCTTCTCGAG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDTGQLL*QFLLLE
Trigger: CTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCTTCTCGTCCTGGAGTaGGTTCCTTCCCGACAGGCT +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLLVLE*VPSRQA
Trigger: AGCCTGTCGGGAAGGAACGCACTCCAGGACGAGAAG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGAGCTTGCTCTTGAGTaGGTTCACCTCGCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDELALE*VHLAAH
Trigger: ATGGGCCGCGAGGTGAACGCACTCAAGAGCAAGCTC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTTGCCCAGGCTGGAGTaGAATGATGCAATTATAGCT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRLPRLE*NDAIIA
Trigger: AGCTATAATTGCATCATTGCACTCCAGCCTGGGCAA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGCAAAAGATGGGCCTTaGGTGATACTTGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREAKDGP*VILVSF
Trigger: GAAAGACACAAGTATCACGCAAGGCCCATCTTTTGC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTTCTCATCTTCTCCTTaGCTCCAGCAATCATGTAGT +
Preference number: 4 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSFSSSP*LQQSCS
Trigger: ACTACATGATTGCTGGAGCCAAGGAGAAGATGAGAA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATATTCTCATCTTCTCCTTaGCTCCAGCAATCATGTAGT +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIFSSSP*LQQSCS
Trigger: ACTACATGATTGCTGGAGCCAAGGAGAAGATGAGAA...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCCTGGGCTGCTGGGATaGGCACAAAGCCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLPGLLG*AQSHWR
Trigger: TCTCCAATGGCTTTGTGCCCATCCCAGCAGCCCAGG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGAAGCCCCTTGCCGATaGGTCTTGTCCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLEAPCR*VLSRAL
Trigger: CAAAGCCCTGGACAAGACCCATCGGCAAGGGGCTTC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGAAGCCCCTTGCCGATaGGTCTTGTCCAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDEAPCR*VLSRAL
Trigger: CAAAGCCCTGGACAAGACCCATCGGCAAGGGGCTTC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAGCTCTCCGTCATCTTaGCCATCTGGTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSSPSS*PSGPGP
Trigger: TGGGCCTGGACCAGATGGCCAAGATGACGGAGAGCT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGCACGAAGTTGGGCGTaGTGTTGCGTAGCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDARSWA*CCVAWS
Trigger: TGACCACGCTACGCAACACCACGCCCAACTTCGTGC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACTATCCTGTATAAGTTaGGGTCAAGTTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRELSCIS*GQVPGL
Trigger: AAGCCCTGGAACTTGACCCCAACTTATACAGGATAG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCTATCCTGTATAAGTTaGGGTCAAGTTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFLSCIS*GQVPGL
Trigger: AAGCCCTGGAACTTGACCCCAACTTATACAGGATAG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTCAGCGATCTGCTCGTaGAAGTCGCTGGCATCACCC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSAICS*KSLASP
Trigger: GGGTGATGCCAGCGACTTCCACGAGCAGATCGCTGA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTTCAGCCTTGTTCCTaGCGGCCCGCTCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDFQPCS*RPALSP
Trigger: TGGACTCAGAGCGGGCCGCCAGGAACAAGGCTGAAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATCATTCTGCAGCTTGTaGACTTTGTCATTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRESFCSL*TLSLSS
Trigger: GGAGCTCAATGACAAAGTCCACAAGCTGCAGAATGA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCTCATTCTGCAGCTTGTaGACTTTGTCATTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFSFCSL*TLSLSS
Trigger: GGAGCTCAATGACAAAGTCCACAAGCTGCAGAATGA...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCATTCTGCAGCTTGTaGACTTTGTCATTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSFCSL*TLSLSS
Trigger: GGAGCTCAATGACAAAGTCCACAAGCTGCAGAATGA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATATCTCCTCGTCCAGCTaGTCTTGCAGGCTGTTCCGC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDISSSS*SCRLFR
Trigger: GCGGAACAGCCTGCAAGACCAGCTGGACGAGGAGAT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGCTCCAGGTTCTGCTTaGCCTCCATCTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLAPGSA*PPSPRP
Trigger: TGGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGCTCCAGGTTCTGCTTaGCCTCCATCTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDAPGSA*PPSPRP
Trigger: TGGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTTCTCGATCTCCTTCTaGAACCTCTTCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVFSISF*NLFFPS
Trigger: AGAGGGGAAGAAGAGGTTCCAGAAGGAGATCGAGAA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGCTGAAGCCTGTTCTTaGTCTTTTCCAGTTTATCAT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKAEACS*SFPVYH
Trigger: ATGATAAACTGGAAAAGACCAAGAACAGGCTTCAGC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATCTCATCCGCGTATTTaGAAGAGATGTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSHPRI*KRCFSP
Trigger: AGGAGAAAAACATCTCTTCCAAATACGCGGATGAGA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTGCTCGTCCCGGGCTTaGAGATCCCTTTCGAACTGG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDCSSRA*RSLSNW
Trigger: CCAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCTGCTTCCAAGCTCTTaGCTTTCTTCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCLLPSS*LSSHSL
Trigger: AAGAGAATGAGAAGAAAGCCAAGAGCTTGGAAGCAG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTCCCGACAGGCTACTaGCCAGCTCCTCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDFPTGY*PAPLPV
Trigger: AACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTTCCCGACAGGCTACTaGCCAGCTCCTCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDFPTGY*PAPLPV
Trigger: AACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGCACTCTCATTCTTCTaGGCCGTGCTGCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDALSFF*AVLRSV
Trigger: CACAGAGCGCAGCACGGCCCAGAAGAATGAGAGTGC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGCACTCTCATTCTTCTaGGCCGTGCTGCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDALSFF*AVLRSV
Trigger: CACAGAGCGCAGCACGGCCCAGAAGAATGAGAGTGC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCAGGCTGGAGGGTGGTaGTTTTTATATTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRQAGGW*FLYSLC
Trigger: ACACAAGGAATATAAAAACCACCACCCTCCAGCCTG...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCTGACGTGAGAAGTTaGAAAGGTTTGCAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGPDVRS*KGLQVR
Trigger: CCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGG...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR TCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCTTTGTTCACGCGGGTaGGTATCCAGCGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLCSRG*VSSGKG
Trigger: GCCTTTTCCGCTGGATACTCACCCGCGTGAACAAAG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCTTTGTTCACGCGGGTaGGTATCCAGCGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLCSRG*VSSGKG
Trigger: GCCTTTTCCGCTGGATACTCACCCGCGTGAACAAAG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTGTCGGAGGAGGCATTaGGCAGGGAAGTCACGTTGT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDCRRRH*AGKSRC
Trigger: ACAACGTGACTTCCCTGCTCAATGCCTCCTCCGACA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCCTCGTACTGCTGGGTaGGGTTCTCGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDPRTAG*GSRSPS
Trigger: AGAAGGAGATCGAGAACCTCACCCAGCAGTACGAGG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCCTCGTACTGCTGGGTaGGGTTCTCGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDPRTAG*GSRSPS
Trigger: AGAAGGAGATCGAGAACCTCACCCAGCAGTACGAGG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACCTTTTCAATTCATGTaGCTACAGAAGGCACTTGGT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREPFQFM*LQKALG
Trigger: ACCAAGTGCCTTCTGTAGTCACATGAATTGAAAAGG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCTCCTTAATGCTGGCTaGCTCGAAGCCCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLLNAG*LEALLL
Trigger: GAGAAGCAGGGCTTCGAGGCAGCCAGCATTAAGGAG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCCACTGTGCGGAACATaGCCTTCTTGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDPLCGT*PSWSWR
Trigger: CCTCCAAGACCAAGAAGGGCATGTTCCGCACAGTGG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAGTTGGGCGTGGTGTTaGGTAGCGTGGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSWAWC*VAWSSA
Trigger: AGCTGATGACCACGCTACGCAACACCACGCCCAACT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAAGAAGATTTTGCTCTaGCCTATCCTGTATAAGTTG +
Preference number: 4 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVKKILL*PILYKL
Trigger: CAACTTATACAGGATAGGGCAGAGCAAAATCTTCTT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGTTCGGAAGAAGATTTTaGTCTGCCCTATCCTGTATA +
Preference number: 4 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSFGRRF*SALSCI
Trigger: TATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAA...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATATTCGGAAGAAGATTTTaGTCTGCCCTATCCTGTATA +
Preference number: 4 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIFGRRF*SALSCI
Trigger: TATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAA...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGCGGTCAGCTGCTGCTaGCTCTTGGCAAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLAVSCC*LLAKAF
Trigger: AAAGGCTTTTGCCAAGAGGCAGCAGCAGCTGACCGC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTTCTCTGCCTTCTGCTaGCGCTCCTTGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDFSAFC*RSLVFC
Trigger: GCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTCTCTGCCTTCTGCTaGCGCTCCTTGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLFSAFC*RSLVFC
Trigger: GCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTCTCTGCCTTCTGCTaGCGCTCCTTGGTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDFSAFC*RSLVFC
Trigger: GCAGAAGACCAAGGAGCGGCAGCAGAAGGCAGAGAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTTCTCCTCGGTCAGCTaGGAGTGCTTCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDFSSVS*ECFCSS
Trigger: GCTGGAACAGAAGCACTCGCAGCTGACCGAGGAGAA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTCAAGTTGCAGCTTCTaGCTGGCAGCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSSCSF*LAASSS
Trigger: GGAGGAGGAAGCTGCCAGGCAGAAGCTGCAACTTGA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCCTGCTGAGTGGCTGTaGTGTCCAGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDPAEWL*CPVCLP
Trigger: TGGAAGACACACTGGACAGCACAGCCACTCAGCAGG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCCTGCTGAGTGGCTGTaGTGTCCAGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLPAEWL*CPVCLP
Trigger: TGGAAGACACACTGGACAGCACAGCCACTCAGCAGG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCCTGCTGAGTGGCTGTaGTGTCCAGTGTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDPAEWL*CPVCLP
Trigger: TGGAAGACACACTGGACAGCACAGCCACTCAGCAGG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGCCTTCTCCTCGTACTaGTGGGTGAGGTTCTCGATC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLAFSSY*WVRFSI
Trigger: GATCGAGAACCTCACCCAGCAGTACGAGGAGAAGGC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCTCTTCTCCTCATTCTaGTCGTCCCGGGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLFSSF*SSRAWR
Trigger: TCTCCAAGCCCGGGACGAGCAGAATGAGGAGAAGAG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCTTCTTTGCTGCAGCTaGCAGGGCACGTTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLLCCS*QGTLLS
Trigger: CGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCAGCTTCTTCTTTGCTaGAGCTGCCAGGGCACGTTG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLQLLLC*SCQGTL
Trigger: CAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCCATCTCGTGGAGCTTaGTCCGGAGCTCCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDPSRGA*SGAPCS
Trigger: AGAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTGCCTTTCTCTGCCTaGTCCTTGTACTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLPFSA*SLYCSA
Trigger: GGCCGAGCAGTACAAGGAGCAGGCAGAGAAAGGCAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTTGCCTTTCTCTGCCTaGTCCTTGTACTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLPFSA*SLYCSA
Trigger: GGCCGAGCAGTACAAGGAGCAGGCAGAGAAAGGCAA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAAAAACTGTAGAAAGTTaGTTATTCACTGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKKTVES*LFTGLG
Trigger: ACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTCATCGTCACTGAGTTaGCCCTTCTGCGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSSSLS*PFCAMV
Trigger: CACCATGGCGCAGAAGGGCCAACTCAGTGACGATGA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTGGTGTTGCGTAGCGTaGTCATCAGCTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDWCCVA*SSACPA
Trigger: AGCTGGGCAAGCTGATGACCACGCTACGCAACACCA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTGGTGTTGCGTAGCGTaGTCATCAGCTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLWCCVA*SSACPA
Trigger: AGCTGGGCAAGCTGATGACCACGCTACGCAACACCA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCCTATCCTGTATAAGTTaGGGTCAAGTTCCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVLSCIS*GQVPGL
Trigger: AAGCCCTGGAACTTGACCCCAACTTATACAGGATAG...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGAGCTTCCACGGTGCTaGCAAAGTCCTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDELPRC*QSPAAS
Trigger: AGAAGCTGCAGGACTTTGCCAGCACCGTGGAAGCTC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTGCTGAAGCCTGTTCTTaGTCTTTTCCAGTTTATCAT +
Preference number: 4 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPAEACS*SFPVYH
Trigger: ATGATAAACTGGAAAAGACCAAGAACAGGCTTCAGC...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGCTGAAGCCTGTTCTTaGTCTTTTCCAGTTTATCAT +
Preference number: 4 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCAEACS*SFPVYH
Trigger: ATGATAAACTGGAAAAGACCAAGAACAGGCTTCAGC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATAGATCCCTTTCGAACTaGCCCTTGAGCGCCTGCATG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDRSLSN*PLSACM
Trigger: CATGCAGGCGCTCAAGGGCCAGTTCGAAAGGGATCT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACTGCTTCCAAGCTCTTaGCTTTCTTCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRELLPSS*LSSHSL
Trigger: AAGAGAATGAGAAGAAAGCCAAGAGCTTGGAAGCAG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTGGTGGTGGTGGTGGTaGTTGAGACAGGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDWWWWW*LRQGLC
Trigger: ACAGAGACCCTGTCTCAACCACCACCACCACCACCA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGATAGTTTATTGTTCTaGTCATCCATGACCAGGATC +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRDSLLF*SSMTRI
Trigger: GATCCTGGTCATGGATGATCAGAACAATAAACTATC...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR TCA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGAAATTCTTGTATAGATaGGGTTTTACTACGTTGCCC +
Preference number: 4 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTKFLYR*GFTTLP
Trigger: GGGCAACGTAGTAAAACCTCATCTATACAAGAATTT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGCTGAAACCCATGATTaGCATGGCCTCCACGGTTTC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDAETHD*HGLHGF
Trigger: GAAACCGTGGAGGCCATGGCAATCATGGGTTTCAGC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTAAGAAGATTTTGCTCTaGCCTATCCTGTATAAGTTG +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSKKILL*PILYKL
Trigger: CAACTTATACAGGATAGGGCAGAGCAAAATCTTCTT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTCGGTCAGCTGCGAGTaGTTCTGTTCCAGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSVSCE*FCSSSL
Trigger: TAAGGAGCTGGAACAGAAGCACTCGCAGCTGACCGA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCCGAGGTCTCGCTTCTaGTTTTCAGCCTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLPRSRF*FSALFL
Trigger: CAGGAACAAGGCTGAAAAGCAGAAGCGAGACCTCGG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTGAACTGCTCAAGCTaGTCTGTGAGCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLNCSS*SVSSST
Trigger: GGTGGAGGAGCTCACAGAGCAGCTTGAGCAGTTCAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTGGCCCTCTTGAACTaGTCAAGCTGCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLALLN*SSCSVS
Trigger: GCTCACAGAGCAGCTTGAGCAGTTCAAGAGGGCCAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTTGGCCCTCTTGAACTaGTCAAGCTGCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLALLN*SSCSVS
Trigger: GCTCACAGAGCAGCTTGAGCAGTTCAAGAGGGCCAA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGTGCTGGCAAAGTCCTaGAGCTTCTTCTTCGAGTCG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDVLAKS*SFFFES
Trigger: CGACTCGAAGAAGAAGCTGCAGGACTTTGCCAGCAC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCTCCTCAGAACCATCTaGATTTTCAATAACTCTACG +
Preference number: 4 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFLLRTI*IFNNST
Trigger: CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR GCA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTAAAACTGTAGAAAGTTaGTTATTCACTGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSKTVES*LFTGLG
Trigger: ACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCGTTTTCTTGCCGTGGTaGAAAACTGTAGAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVVFLPW*KTVESC
Trigger: GCAACTTTCTACAGTTTTGCACCACGGCAAGAAAAC...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTGTTTTCTTGCCGTGGTaGAAAACTGTAGAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGVFLPW*KTVESC
Trigger: GCAACTTTCTACAGTTTTGCACCACGGCAAGAAAAC...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTCAGGGTGTAAACAGTaGAGCATTCCTGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSGCKQ*SIPAPL
Trigger: GAGGGGAGCAGGAATGCTGCACTGTTTACACCCTGA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTTCTCCTCGTACTGCTaGGTGAGGTTCTCGATCTCC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDFSSYC*VRFSIS
Trigger: GGAGATCGAGAACCTCACCCAGCAGTACGAGGAGAA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCTCATCCGCGTATTTaGAAGAGATGTTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRSHPRI*KRCFSP
Trigger: AGGAGAAAAACATCTCTTCCAAATACGCGGATGAGA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAGGGACCGGTTACCGTaGATATGTTTTTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRERDRLP*ICFSKN
Trigger: GTTTTTAGAAAAACATATCCACGGTAACCGGTCCCT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCTGTTTCTTTCCTTCTTaGAGACGATATTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFCFFPS*RRYFQA
Trigger: AGCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACA...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR TCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATAGGTGGCAAACTTTCTaGGCAGCTGTGTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDRWQTF*AAVLSG
Trigger: GCCAGATAACACAGCTGCTCAGAAAGTTTGCCACCT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGAGGTGGCAAACTTTCTaGGCAGCTGTGTTATCTGGC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLRWQTF*AAVLSG
Trigger: GCCAGATAACACAGCTGCTCAGAAAGTTTGCCACCT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTACTTGTGTCTTTCTTaGCCTTGTGGGAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDYLCLS*PCGRRP
Trigger: TGGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTCACTGTTTTGGCGTTaGCGAAAGCCTCCAGAATCG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSLFWR*RKPPES
Trigger: CGATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGAAGGCGCTCATATGTTaGCTTGGCCAAAGCCTCTAC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLKALIC*LGQSLY
Trigger: GTAGAGGCTTTGGCCAAGGCAACATATGAGCGCCTT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAAGAAGATTTTGCTCTaGCCTATCCTGTATAAGTTG +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREKKILL*PILYKL
Trigger: CAACTTATACAGGATAGGGCAGAGCAAAATCTTCTT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTTCGGAAGAAGATTTTaGTCTGCCCTATCCTGTATA +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVFGRRF*SALSCI
Trigger: TATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATAGGTCCTCTTGTAGCTaGATGAGGTCTGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDRSSCS*MRSASK
Trigger: CTTGGAAGCAGACCTCATGCAGCTACAAGAGGACCT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGAGGTCCTCTTGTAGCTaGATGAGGTCTGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLRSSCS*MRSASK
Trigger: CTTGGAAGCAGACCTCATGCAGCTACAAGAGGACCT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAGCTTCTTGTCTTTCTaGTTCAGCGACTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSFLSF*FSDLVA
Trigger: GGCCACCAAGTCGCTGAAGCAGAAAGACAAGAAGCT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGGTTCCATTGAAGTCTaGGTCTCGAGTGTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDGSIEV*VSSVRF
Trigger: GAAACGGACACTCGAGACGCAGACTTCAATGGAACC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAAAACTGTAGAAAGTTaGTTATTCACTGGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREKTVES*LFTGLG
Trigger: ACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGCACTTGGTGAACTGTaGGTGTCTGAGGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDALGEL*VSEVWK
Trigger: TTTCCACACCTCAGACACGCACAGTTCACCAAGTGC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCTCTCGTCTCTGGCTTaGCGAATTGCCCGTGATTTT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLSSLA*RIARDF
Trigger: AAAATCACGGGCAATTCGCCAAGCCAGAGACGAGAG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCTCTCGTCTCTGGCTTaGCGAATTGCCCGTGATTTT +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLSSLA*RIARDF
Trigger: AAAATCACGGGCAATTCGCCAAGCCAGAGACGAGAG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTGGCAAAAGCCTTTCTaGCCAAGTAGCCACGACACA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDWQKPF*PSSHDT
Trigger: TGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGAGGTCCAGCATCTGCTaGGCCATCTTCTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLRSSIC*AIFFLS
Trigger: TGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTCGAGTCGGAGAGCTaGATGTTGAGAGTGGAGATG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLFESES*MLRVEM
Trigger: CATCTCCACTCTCAACATCCAGCTCTCCGACTCGAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGCCCAGGCTGGAGGGTaGTGGTTTTTATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDAQAGG*WFLYSL
Trigger: CAAGGAATATAAAAACCACCACCCTCCAGCCTGGGC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGCCCAGGCTGGAGGGTaGTGGTTTTTATATTCCTTG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDAQAGG*WFLYSL
Trigger: CAAGGAATATAAAAACCACCACCCTCCAGCCTGGGC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCTACGTTGCCCAGGCTaGAGGGTGGTGGTTTTTATA +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLRCPG*RVVVFI
Trigger: TATAAAAACCACCACCCTCCAGCCTGGGCAACGTAG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGAATTTGCCGAATCGTaGGGAGTTGTCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLEFAES*GVVVLH
Trigger: GTGAAGAACGACAACTCCTCACGATTCGGCAAATTC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGGAAGGTGTAGTTGTTaGAGCCCTCCAAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLGRCSC*SPPKAS
Trigger: ACTTGCTTTTGGAGGGCTTCAACAACTACACCTTCC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGGAAGGTGTAGTTGTTaGAGCCCTCCAAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDGRCSC*SPPKAS
Trigger: ACTTGCTTTTGGAGGGCTTCAACAACTACACCTTCC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAAGCTGCAGGACCGATaGTACCACCTTCAATATGGA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDKLQDR*YHLQYG
Trigger: TCCATATTGAAGGTGGTATCATCGGTCCTGCAGCTT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTGTTCTGATCATCCATaGCCAGGATCTCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDCSDHP*PGSHPP
Trigger: TGGAGGATGAGATCCTGGTCATGGATGATCAGAACA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTGTTCTGATCATCCATaGCCAGGATCTCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDCSDHP*PGSHPP
Trigger: TGGAGGATGAGATCCTGGTCATGGATGATCAGAACA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGAGGGCATTGTTCTTCTaGGCGATTTCATCGTCAAGC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLRALFF*AISSSS
Trigger: GCTTGACGATGAAATCGCTCAGAAGAACAATGCCCT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAGGGCATTGTTCTTCTaGGCGATTTCATCGTCAAGC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDRALFF*AISSSS
Trigger: GCTTGACGATGAAATCGCTCAGAAGAACAATGCCCT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCTTCCATTTCGGCTTTaGGCATTTTGTTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLPFRL*AFCWSA
Trigger: AGCGGACCAACAAAATGCTCAAAGCCGAAATGGAAG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGAATTCTCAAAGGCCTaGCGTGAGAAGTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLEFSKA*REKLER
Trigger: CCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGAATTCTCAAAGGCCTaGCGTGAGAAGTTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDEFSKA*REKLER
Trigger: CCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTTGCTTGTAGAAGCTaGTTTTCCAGCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDFACRS*FSSSPV
Trigger: CACGGGAGAGCTGGAAAAGCAGCTTCTACAAGCAAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300036.6
ENST00000616422.4
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTCAATATGGATAGCTaGTCCTCCTCGCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLFNMDS*SSSLKP
Trigger: GGGTTTCAGCGAGGAGGAGCAGCTATCCATATTGAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCAAGAAGATTTTGCTCTaGCCTATCCTGTATAAGTTG +
Preference number: 4 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVKKILL*PILYKL
Trigger: CAACTTATACAGGATAGGGCAGAGCAAAATCTTCTT...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTGTCACCTGCAGCAGTaGCTTCACTTTGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDCHLQQ*LHFGEK
Trigger: CTTTTCACCAAAGTGAAGCCACTGCTGCAGGTGACA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTGTCACCTGCAGCAGTaGCTTCACTTTGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDCHLQQ*LHFGEK
Trigger: CTTTTCACCAAAGTGAAGCCACTGCTGCAGGTGACA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTGTCACCTGCAGCAGTaGCTTCACTTTGGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLCHLQQ*LHFGEK
Trigger: CTTTTCACCAAAGTGAAGCCACTGCTGCAGGTGACA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCCTGACGTGAGAAGTTaGAAAGGTTTGCAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDPDVRS*KGLQVR
Trigger: CCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCAGTCTGCTGGGTTTTaGTTTGTTCTGGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDQSAGF*FVLGCC
Trigger: ACAACAACCCAGAACAAAGCAAAACCCAGCAGACTG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTGCCCAGGCTGGAGTaGAATGATGCAATTATAGCT +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLPRLE*NDAIIA
Trigger: AGCTATAATTGCATCATTGCACTCCAGCCTGGGCAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTCATTCTGCAGCTTGTaGACTTTGTCATTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDSFCSL*TLSLSS
Trigger: GGAGCTCAATGACAAAGTCCACAAGCTGCAGAATGA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTCATTCTGCAGCTTGTaGACTTTGTCATTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSFCSL*TLSLSS
Trigger: GGAGCTCAATGACAAAGTCCACAAGCTGCAGAATGA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTCTTTCTCCAGCGTCTaGTTATTCTTGTCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDSFSSV*LFLSRF
Trigger: GAACCTAGACAAGAATAAGCAGACGCTGGAGAAAGA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGTTTTCTTGCCGTGGTaGAAAACTGTAGAAAGTTGC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLVFLPW*KTVESC
Trigger: GCAACTTTCTACAGTTTTGCACCACGGCAAGAAAAC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCTGCTTCCAAGCTCTTaGCTTTCTTCTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLLPSS*LSSHSL
Trigger: AAGAGAATGAGAAGAAAGCCAAGAGCTTGGAAGCAG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGATAGTTTATTGTTCTaGTCATCCATGACCAGGATC +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLDSLLF*SSMTRI
Trigger: GATCCTGGTCATGGATGATCAGAACAATAAACTATC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCTCCTCAGAACCATCTaGATTTTCAATAACTCTACG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLLRTI*IFNNST
Trigger: CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGAAGTTGGAAAGGTTTaGAGGTTAGGGAATGAATTG +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLEVGKV*RLGNEL
Trigger: CAATTCATTCCCTAACCTGCAAACCTTTCCAACTTC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR GCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGAAGTTGGAAAGGTTTaGAGGTTAGGGAATGAATTG +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDEVGKV*RLGNEL
Trigger: CAATTCATTCCCTAACCTGCAAACCTTTCCAACTTC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CCA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATAGGGACCGGTTACCGTaGATATGTTTTTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDRDRLP*ICFSKN
Trigger: GTTTTTAGAAAAACATATCCACGGTAACCGGTCCCT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTGTTTCTTTCCTTCTTaGAGACGATATTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLCFFPS*RRYFQA
Trigger: AGCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR TCA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAAATTCTTGTATAGATaGGGTTTTACTACGTTGCCC +
Preference number: 4 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDKFLYR*GFTTLP
Trigger: GGGCAACGTAGTAAAACCTCATCTATACAAGAATTT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS CCA 90 bp GGGCGCCCTGGGGACGCTGTGACCGCTTGGGACAGCCCTGGCTTCTaGGAGCCCCAGGGTCTGGGCGGCGGGCCTCACCCTCTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: GRPGDAVTAWDSPGF*EPQGLGGGPHPLLV
Trigger: CACGAGAAGAGGGTGAGGCCCGCCGCCCAGACCCTGGGGCTCCCAGAAGCCAGGGCTGTCCCAAGCGGTCACAGCGTCCCCAGGGCGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS GCA 90 bp AACCTGCAGACGGAGGCACCGGCCAGTCCTAGCGGCCCTACCACGTaGCCCCTCCTGTGGGATAGATGGGGCAGGGCTGACACACGAGGA +
Preference number: 5 (lower is better)
Translates to: NLQTEAPASPSGPTT*PLLWDRWGRADTRG
Trigger: TCCTCGTGTGTCAGCCCTGCCCCATCTATCCCACAGGAGGGGGCACGTGGTAGGGCCGCTAGGACTGGCCGGTGCCTCCGTCTGCAGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS GCA 90 bp AGCGTGACTGTGGTGTCCAGGCGGCCCTCACCTGCTGTGTGGCTTTaGGGACCCGGTCGCTCATGGCCTCCATGTTGCCCTGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SVTVVSRRPSPAVWL*GPGRSWPPCCPAPP
Trigger: AGGAGGAGCAGGGCAACATGGAGGCCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGTGAGGGCCGCCTGGACACCACAGTCACGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 90 bp GTAGGCAGCGTGACTGTGGTGTCCAGGCGGCCCTCACCTGCTGTGTaGCTTTGCGGACCCGGTCGCTCATGGCCTCCATGTTGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: VGSVTVVSRRPSPAV*LCGPGRSWPPCCPA
Trigger: AGCAGGGCAACATGGAGGCCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGTGAGGGCCGCCTGGACACCACAGTCACGCTGCCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS-3UTR CAA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGAGCACGGAGGCTTCGTaGAGGCACGTCAGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQSTEAS*RHVSSA
Trigger: GGCGGAGCTGACGTGCCTCAACGAAGCCTCCGTGCT...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCGAGCTCTCCGTCATCTaGGCCATCTGGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RCSFLRLALMRWDSSSASELSVI*AIWSRP
Trigger: GGGCCTGGACCAGATGGCCAAGATGACGGAGAGCTC...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp CTTGTGGACTTTGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCGCTGCACTTCGGCCCATGGCCTCGTaGCTCTCCGTGGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: LVDFVIELRPGPLPIAALRPMAS*LSVASS
Trigger: GGATGAGGCCACGGAGAGCAACGAGGCCATGGGCCG...AAGTGCAGCGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS TCA 90 bp TCTCATTCTTCTGGGCCGTGCTGCGCTCTGTGGCCAGCTCGTTGCTaGGCTGCTCGGCCTGGGGAGGAGAGTGAAGGCCATGAGGCGGAC +
Preference number: 5 (lower is better)
Translates to: SHSSGPCCALWPARC*AARPGEESEGHEAD
Trigger: GTCCGCCTCATGGCCTTCACTCTCCTCCCCAGGCCGAGCAGCTCAGCAACGAGCTGGCCACAGAGCGCAGCACGGCCCAGAAGAATGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS-3UTR CAA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCAGCACACCTGGAGGGTaGTTCGGTCGCTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: RCSFLRLALMRWDSSSASSTPGG*FGRSMS
Trigger: GCTCATCGAGCGACCGAACAACCCTCCAGGTGTGCT...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS GCA 90 bp TGCCGTGGTCAGATCTCCATCCTACCATCTTCCCACCCACAAACCTaGAGACGGAGGCACCGGCCAGTCCTAGCGGCCCTACCACGTGCC +
Preference number: 5 (lower is better)
Translates to: CRGQISILPSSHPQT*RRRHRPVLAALPRA
Trigger: GGCACGTGGTAGGGCCGCTAGGACTGGCCGGTGCCTCCGTCTGCAGGTTTGTGGGTGGGAAGATGGTAGGATGGAGATCTGACCACGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS GCA 90 bp AGAGACAGTAGGCAGCGTGACTGTGGTGTCCAGGCGGCCCTCACCTaGTGTGTGGCTTTGCGGACCCGGTCGCTCATGGCCTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: RDSRQRDCGVQAALT*CVALRTRSLMASML
Trigger: CAACATGGAGGCCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGTGAGGGCCGCCTGGACACCACAGTCACGCTGCCTACTGTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAGCACGGAGGCTTCGTaGAGGCACGTCAGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSTEAS*RHVSSA
Trigger: GGCGGAGCTGACGTGCCTCAACGAAGCCTCCGTGCT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGAGGAACGCATCCAGCTaGCCGGACCTCTTCTCGTGG +
Preference number: 5 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQRNASS*PDLFSW
Trigger: CCACGAGAAGAGGTCCGGCAAGCTGGATGCGTTCCT...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCCAGCTCCTGCTTCTaGGCCGCCAGCCGCACCCGC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSSSCF*AASRTR
Trigger: GCGGGTGCGGCTGGCGGCCAAGAAGCAGGAGCTGGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTGTTCCACCTCCTGCTaGGCCTGGCCCAGGACCCGC +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTCSTSC*AWPRTR
Trigger: GCGGGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGGCCGCGATGGTGGACTaGAACTTGGACTTGACGGCC +
Preference number: 5 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQAAMVD*NLDLTA
Trigger: GGCCGTCAAGTCCAAGTTCAAGTCCACCATCGCGGC...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCGGCCCATGGCCTCGTaGCTCTCCGTGGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTRPMAS*LSVASS
Trigger: GGATGAGGCCACGGAGAGCAACGAGGCCATGGGCCG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS TCA 90 bp GGCCTCCAGACAAGCCGGCCATGGTGGCTGCCCCAGAGTCCCCTCTaGGGACGCAAAGTGACATCTGGAATGGCGAACACTGGAGACACC +
Preference number: 5 (lower is better)
Translates to: GLQTSRPWWLPQSPL*GRKVTSGMANTGDT
Trigger: GGTGTCTCCAGTGTTCGCCATTCCAGATGTCACTTTGCGTCCTCAGAGGGGACTCTGGGGCAGCCACCATGGCCGGCTTGTCTGGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS GCA 90 bp ACCTCATCCCCCTTCTCCTCCTTAATGCTGGCTGCCTCGAAGCCCTaGTTCTCCGAGGGGACCCAGACGAGTCTCTTGGCGGCCCAGTCA +
Preference number: 5 (lower is better)
Translates to: TSSPFSSLMLAASKP*FSEGTQTSLLAAQS
Trigger: TGACTGGGCCGCCAAGAGACTCGTCTGGGTCCCCTCGGAGAAGCAGGGCTTCGAGGCAGCCAGCATTAAGGAGGAGAAGGGGGATGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000571505.1
ENST00000576790.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
ENST00000633799.1
ENST00000634050.1
ENST00000652121.1
CDS GCA 90 bp TGCACACAGGAAGCCGCCACGCGTGTGTTGACTGGTGCAGGATCCTaGTGCAGGAGAGACAGTAGGCAGCGTGACTGTGGTGTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: CTQEAATRVLTGAGS*CRRDSRQRDCGVQA
Trigger: CGCCTGGACACCACAGTCACGCTGCCTACTGTCTCTCCTGCAGCAGGATCCTGCACCAGTCAACACACGCGTGGCGGCTTCCTGTGTGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS GCA 90 bp TCTACTCTCAGGCCCCACCACCCTCTTGTCCCTCAATCCAGGGCCTaGACACAGGAAGCCGCCACGCGTGTGTTGACTGGTGCAGGATCC +
Preference number: 5 (lower is better)
Translates to: STLRPHHPLVPQSRA*TQEAATRVLTGAGS
Trigger: GGATCCTGCACCAGTCAACACACGCGTGGCGGCTTCCTGTGTGCAGGCCCTGGATTGAGGGACAAGAGGGTGGTGGGGCCTGAGAGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCAGCACGGAGGCTTCGTaGAGGCACGTCAGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSTEAS*RHVSSA
Trigger: GGCGGAGCTGACGTGCCTCAACGAAGCCTCCGTGCT...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACGAGCTCTCCGTCATCTaGGCCATCTGGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDELSVI*AIWSRP
Trigger: GGGCCTGGACCAGATGGCCAAGATGACGGAGAGCTC...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTGTTCCACCTCCTGCTaGGCCTGGCCCAGGACCCGC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQCSTSC*AWPRTR
Trigger: GCGGGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCTTGAGCGCCTGCATGTaGACTTCCAGCCGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: RCSFLRLALMRWDSSSASLSACM*TSSRSL
Trigger: CAAACTGCGGCTGGAAGTCAACATGCAGGCGCTCAA...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCCTGCTGTGTGGCTTaGCGGACCCGGTCGCTCATG +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTACCVA*RTRSLM
Trigger: CATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTCCTGCGGTTGGCGTaGATGCGCTGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDFLRLA*MRWDSS
Trigger: GGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCGGCCCATGGCCTCGTaGCTCTCCGTGGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNRPMAS*LSVASS
Trigger: GGATGAGGCCACGGAGAGCAACGAGGCCATGGGCCG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCGCCTGAGCTTGCTCTaGAGTGCGTTCACCTCGCGG +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDRLSLL*SAFTSR
Trigger: CCGCGAGGTGAACGCACTCAAGAGCAAGCTCAGGCG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000621545.2
CDS CCA 90 bp AAGCTGGGAAAGCAAACGAGCTGCTCTTGGCCTAGCCCTAAAACATaGCGGCTGCAGTTGGGCCCCGAGGCCTCCAGGCCCTGGATTCTG +
Preference number: 5 (lower is better)
Translates to: KLGKQTSCSWPSPKT*RLQLGPEASRPWIL
Trigger: CAGAATCCAGGGCCTGGAGGCCTCGGGGCCCAACTGCAGCCGCCATGTTTTAGGGCTAGGCCAAGAGCAGCTCGTTTGCTTTCCCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CCA 90 bp CGGACTCCAGGGATGGCCGTGAGGTACGGGGAGCCAGCCACGCCGTaGCTGGAAAATGAGACACTGCAGCGTGGAGAGGAGTATTCTGAA +
Preference number: 5 (lower is better)
Translates to: RTPGMAVRYGEPATP*LENETLQRGEEYSE
Trigger: TTCAGAATACTCCTCTCCACGCTGCAGTGTCTCATTTTCCAGCCACGGCGTGGCTGGCTCCCCGTACCTCACGGCCATCCCTGGAGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS-3UTR CAA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTACCCAGACGAGTCTCTaGGCGGCCCAGTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPTQTSL*AAQSAW
Trigger: CCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGGT...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAGCACGGAGGCTTCGTaGAGGCACGTCAGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSTEAS*RHVSSA
Trigger: GGCGGAGCTGACGTGCCTCAACGAAGCCTCCGTGCT...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTGTGTCTTTCTTGCCCTaGTGGGAGGAGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: SARSWAWCCVAWSSACPAVSFLP*WEEATT
Trigger: CGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGACAC...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp CGCTGCAGCTTCCTGCGGTTGGCGTTGATGCGCTGGGACTCCTCCTCTGCCTCCAGCAGGGAAGTCACGTaGTCATTCAGCGGGTCCATA +
Preference number: 5 (lower is better)
Translates to: RCSFLRLALMRWDSSSASSREVT*SFSGSI
Trigger: TATGGACCCGCTGAATGACAACGTGACTTCCCTGCT...GGAGGCAGAGGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCCCCATCGCTGCACTaGGACTGCAGCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSPSLH*DCSSCT
Trigger: GGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTAGGGACGCCACGTCCTaGGCCAGCTTAATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SARSWAWCCVAWSSACPARDATS*ASLMAF
Trigger: GAAGGCCATTAAGCTGGCCAAGGACGTGGCGTCCCT...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTGCTCGTCCCGGGCTaGGAGATCCCTTTCGAACTG +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLLVPG*EIPFEL
Trigger: CAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTCTTCTCGAGGTCCGCTaGTTTGCGAGCCCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: SARSWAWCCVAWSSACPALLEVR*FASPLS
Trigger: GCTGAGAGGGCTCGCAAACAAGCGGACCTCGAGAAG...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCTGTGGCCAGCTCGTaGCTGAGCTGCTCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSVASS*LSCSAC
Trigger: GCAGGCCGAGCAGCTCAGCAACGAGCTGGCCACAGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CTTGTGGACTTTGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCGCTGCACTTTCCATCTCGTGGAGCTaGCTCCGGAGCTCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: LVDFVIELRPGPLPIAALSISWS*LRSSLF
Trigger: GAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGGA...AAGTGCAGCGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS GCA 90 bp CAGCTCCACAACCACCTCATCCCCCTTCTCCTCCTTAATGCTGGCTaGCTCGAAGCCCTGCTTCTCCGAGGGGACCCAGACGAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: QLHNHLIPLLLLNAG*LEALLLRGDPDESL
Trigger: AAGAGACTCGTCTGGGTCCCCTCGGAGAAGCAGGGCTTCGAGGCAGCCAGCATTAAGGAGGAGAAGGGGGATGAGGTGGTTGTGGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000571505.1
ENST00000576790.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
ENST00000633799.1
ENST00000634050.1
ENST00000652121.1
CDS GCA 90 bp AGAGAGCGCACTGAGACCATGCCTCTTCCTGCCTTGTTTGGCCTCTaGACGAGTCCCTTGATCCCGGGCACCCTGTCCTCTCCTTCATCC +
Preference number: 5 (lower is better)
Translates to: RERTETMPLPALFGL*TSPLIPGTLSSPSS
Trigger: GGATGAAGGAGAGGACAGGGTGCCCGGGATCAAGGGACTCGTGCAGAGGCCAAACAAGGCAGGAAGAGGCATGGTCTCAGTGCGCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 90 bp CAGTTCAGGCTTTGCTGCCCAACTTCAGCCGTTAACCCCATGCTGTaGGCAAGCAGGAGGCAGATGGTACAGAGGATGGGAGGTGGGGCG +
Preference number: 5 (lower is better)
Translates to: QFRLCCPTSAVNPML*ASRRQMVQRMGGGA
Trigger: CGCCCCACCTCCCATCCTCTGTACCATCTGCCTCCTGCTTGCCCACAGCATGGGGTTAACGGCTGAAGTTGGGCAGCAAAGCCTGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571910.2
ENST00000631759.1
CDS CCA 90 bp ACCTCAGGAGATCAGGGAGGTGGCTTTGGCCTCCCACAGGATGCATaGCCGGGACTCAAGATGACCCCTGAGAGTTCAGACCCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: TSGDQGGGFGLPQDA*PGLKMTPESSDPSL
Trigger: AAGGCTGGGGTCTGAACTCTCAGGGGTCATCTTGAGTCCCGGCCATGCATCCTGTGGGAGGCCAAAGCCACCTCCCTGATCTCCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTACCGCTCCCTCAGGTaGTGTAGCACGGAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTYRSLR*CSTEAS
Trigger: CGAAGCCTCCGTGCTACACAACCTGAGGGAGCGGTA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGTGTCTTTCTTGCCCTaGTGGGAGGAGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTVSFLP*WEEATT
Trigger: CGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGACAC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTACATCTCGCCCAACCTaGATACGAGGAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: ASSRARARDRALVSFSLATSRPT*IRGVRM
Trigger: CATCCTCACTCCTCGTATCAAGGTTGGGCGAGATGT...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGAGCTCTCCGTCATCTaGGCCATCTGGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQELSVI*AIWSRP
Trigger: GGGCCTGGACCAGATGGCCAAGATGACGGAGAGCTC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGTCCAGTTTCTTGATCTaGGCCTCAGCCGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQSSFLI*ASAVTF
Trigger: GAAGGTCACGGCTGAGGCCAAGATCAAGAAACTGGA...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGTCATCCTCCAGTTTCTaGATCTTGGCCTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQSSSSF*ILASAV
Trigger: CACGGCTGAGGCCAAGATCAAGAAACTGGAGGATGA...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp AGCGCACGAAGTTGGGCGTGGTGTTGCGTAGCGTGGTCATCAGCTTGCCCAGCTTTCTGCTTTTCAGCCTaGTTCCTGGCGGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: SARSWAWCCVAWSSACPAFCFSA*FLAARS
Trigger: AGAGCGGGCCGCCAGGAACAAGGCTGAAAAGCAGAA...AGCTGGGCAAGCTGATGACCACGCTACGCAACACCACGCCCAACTTCGTGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTTGTGGACTTTGTCATaGAGCTCCGCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLWTLS*SSARAR
Trigger: GCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGTCTTGGAGGCGCTGGGCAGCGAGCTCTCCGTCATCTTGGCCATCTGGTCCAGAGCTTCGTAGACACGTaGAGCTTCTGCCGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: GLGGAGQRALRHLGHLVQSFVDT*SFCRVS
Trigger: AGAAACCCGGCAGAAGCTCAACGTGTCTACGAAGCT...CTGGACCAGATGGCCAAGATGACGGAGAGCTCGCTGCCCAGCGCCTCCAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCGCTCCAGGTTCTGCTaGGCCTCCATCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNRSRFC*ASISSS
Trigger: GGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGCG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCAGCTGCCAGGGCACGTaGCTTTCGCTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSCQGT*LSLVFQ
Trigger: CTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGCT...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCTTCCAGCTTCTTCTTaGCTGCAGCTGCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDLPASS*LQLPGH
Trigger: GTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAGTTTGCGTAGCTGCTaGATGGCTTCCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSLRSC*MASSLP
Trigger: GGGGAGGGAGGAAGCCATCAAGCAGCTACGCAAACT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTTGCTCCGGAGCTCCTaGTTCTGCCGCTCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLLRSS*FCRSSC
Trigger: GCAGCTCGAGCGGCAGAACAAGGAGCTCCGGAGCAA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTTGCAGCTTCCTGCGGTaGGCGTTGATGCGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPCSFLR*ALMRWD
Trigger: GTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCA...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCGCCTGAGCTTGCTCTaGAGTGCGTTCACCTCGCGG +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNRLSLL*SAFTSR
Trigger: CCGCGAGGTGAACGCACTCAAGAGCAAGCTCAGGCG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000621545.2
CDS GCA 90 bp CCATTCAGTTTCCTACCTTCCCGACAGGCTACTGGCCAGCTCCTCTaGCAGTTCCTCCTTCTCGAGGTCCGCTTGTTTGCGAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: PFSFLPSRQATGQLL*QFLLLEVRLFASPL
Trigger: GAGAGGGCTCGCAAACAAGCGGACCTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAAGGTAGGAAACTGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 90 bp GGGATGCCTGAGGGTCAAATTGTGAGGGCTCCTAGGAGTACTGGTTaGCCCGGTAGAAGCAGCAGGATCACCCAGAGGGTCAAGGAACCG +
Preference number: 5 (lower is better)
Translates to: GMPEGQIVRAPRSTG*PGRSSRITQRVKEP
Trigger: CGGTTCCTTGACCCTCTGGGTGATCCTGCTGCTTCTACCGGGCCAACCAGTACTCCTAGGAGCCCTCACAATTTGACCCTCAGGCATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 90 bp CATGCTGTGGGCAAGCAGGAGGCAGATGGTACAGAGGATGGGAGGTaGGGCGGGGAGATTCTTGCGAACACTCAGAACCCCACAGGTCAA +
Preference number: 5 (lower is better)
Translates to: HAVGKQEADGTEDGR*GGEILANTQNPTGQ
Trigger: TTGACCTGTGGGGTTCTGAGTGTTCGCAAGAATCTCCCCGCCCCACCTCCCATCCTCTGTACCATCTGCCTCCTGCTTGCCCACAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631759.1
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTGCGCCATGGTGCCTaGTTGGTCCCAGATCTCCAA +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLRHGA*LVPDLQ
Trigger: TTGGAGATCTGGGACCAACAAGGCACCATGGCGCAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTCATCGTCACTGAGTaGGCCCTTCTGCGCCATGGT +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLIVTE*ALLRHG
Trigger: ACCATGGCGCAGAAGGGCCAACTCAGTGACGATGAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAACCCAGACGAGTCTCTaGGCGGCCCAGTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRTQTSL*AAQSAW
Trigger: CCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGGT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATACCCAGACGAGTCTCTaGGCGGCCCAGTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNTQTSL*AAQSAW
Trigger: CCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGGT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTTACCGCTCCCTCAGGTaGTGTAGCACGGAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPYRSLR*CSTEAS
Trigger: CGAAGCCTCCGTGCTACACAACCTGAGGGAGCGGTA...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGTGTCTTTCTTGCCCTaGTGGGAGGAGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNVSFLP*WEEATT
Trigger: CGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGACAC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCAGGTCGGCCACAAACTaGTCGGAGGAGGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTRSATN*SEEALS
Trigger: GCTCAATGCCTCCTCCGACAAGTTTGTGGCCGACCT...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGATGCAGCGCACGAAGTaGGGCGTGGTGTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQMQRTK*GVVLRS
Trigger: GCTACGCAACACCACGCCCAACTTCGTGCGCTGCAT...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACATGCAGCGCACGAAGTaGGGCGTGGTGTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNMQRTK*GVVLRS
Trigger: GCTACGCAACACCACGCCCAACTTCGTGCGCTGCAT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGAACGCATCCAGCTaGCCGGACCTCTTCTCGTGG +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNRNASS*PDLFSW
Trigger: CCACGAGAAGAGGTCCGGCAAGCTGGATGCGTTCCT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTCAGGATCTCGTAGCGTaGGCGGAACTCCTGGAAGAC +
Preference number: 5 (lower is better)
Translates to: GPLPASSLLQLPGHVAFAQDLVA*AELLED
Trigger: GTCTTCCAGGAGTTCCGCCAACGCTACGAGATCCTG...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATTCCAGCTCCTGCTTCTaGGCCGCCAGCCGCACCCGC +
Preference number: 5 (lower is better)
Translates to: KVLQLLLRVGELDVESGDSSSCF*AASRTR
Trigger: GCGGGTGCGGCTGGCGGCCAAGAAGCAGGAGCTGGA...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGGACGCCACGTCCTaGGCCAGCTTAATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNRDATS*ASLMAF
Trigger: GAAGGCCATTAAGCTGGCCAAGGACGTGGCGTCCCT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTGCCGGGTTTCTTCTaGAAGCAGCTCCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLPGFF*KQLLGV
Trigger: GACACCCAGGAGCTGCTTCAAGAAGAAACCCGGCAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCAGGTTGGACACGAGTaGCCGCTGGTTGTCCAAATC +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDQVGHE*PLVVQI
Trigger: GATTTGGACAACCAGCGGCAACTCGTGTCCAACCTG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTGCTTCTTTTCCAGGTaGGACACGAGTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDCFFSR*DTSCRW
Trigger: CCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGCA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACAGCTCATGGACGTTCTaGCCCACGTCATCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSSWTF*PTSSLE
Trigger: CTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CAAGGTCCAGCATCTGCTGGGCCATCTTCTTCCTTTCAGCCTGTAGCTGCTGGCAGCTGCCAGGGCACGTaGCTTTCGCTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: QGPASAGPSSSFQPVAAGSCQGT*LSLVFQ
Trigger: CTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGCT...GCCAGCAGCTACAGGCTGAAAGGAAGAAGATGGCCCAGCAGATGCTGGACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTAGTTTGCGTAGCTGCTaGATGGCTTCCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GPLPASSLLQLPGHVAFASLRSC*MASSLP
Trigger: GGGGAGGGAGGAAGCCATCAAGCAGCTACGCAAACT...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTCGAGGTCCGCTTGTTaGCGAGCCCTCTCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSRSAC*RALSAA
Trigger: CGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCGA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCTTCTCGAGGTCCGCTaGTTTGCGAGCCCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLLEVR*FASPLS
Trigger: GCTGAGAGGGCTCGCAAACAAGCGGACCTCGAGAAG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCCATCTCGTGGAGCTaGCTCCGGAGCTCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSISWS*LRSSLF
Trigger: GAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTCTGCTTCAGCGACTaGGTGGCCGCCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDFCFSD*VAACFS
Trigger: AGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGAA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS TCA 90 bp GAGCGGGCAGCCCCATTCTATGAGGCTCAACTTCATGAAGACGATTaGGAAACCCACCGTGAGCGGCACCTCAGGAGATCAGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: ERAAPFYEAQLHEDD*ETHRERHLRRSGRW
Trigger: CCACCTCCCTGATCTCCTGAGGTGCCGCTCACGGTGGGTTTCTCAATCGTCTTCATGAAGTTGAGCCTCATAGAATGGGGCTGCCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 90 bp TCAAGGAACCGAGAGGCTGCGTCGCCCACCTGGATGTTGAAATCATaGAGAACTGTGAGGAGTGGTGTGGGAGACAGGAAGCCCGGAGCT +
Preference number: 5 (lower is better)
Translates to: SRNREAASPTWMLKS*RTVRSGVGDRKPGA
Trigger: AGCTCCGGGCTTCCTGTCTCCCACACCACTCCTCACAGTTCTCCATGATTTCAACATCCAGGTGGGCGACGCAGCCTCTCGGTTCCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCGCCATGGTGCCTTGTaGGTCCCAGATCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQRHGAL*VPDLQL
Trigger: CAGTTGGAGATCTGGGACCAACAAGGCACCATGGCG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCTGCGCCATGGTGCCTaGTTGGTCCCAGATCTCCAA +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLRHGA*LVPDLQ
Trigger: TTGGAGATCTGGGACCAACAAGGCACCATGGCGCAG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTCATCGTCACTGAGTaGGCCCTTCTGCGCCATGGT +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLIVTE*ALLRHG
Trigger: ACCATGGCGCAGAAGGGCCAACTCAGTGACGATGAG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CTTGTGGACTTTGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCGCTGCACTTCTCTGGCTTGGCGAATaGCCCGTGATTTTTCTAGCA +
Preference number: 5 (lower is better)
Translates to: LVDFVIELRPGPLPIAALLWLGE*PVIFLA
Trigger: TGCTAGAAAAATCACGGGCAATTCGCCAAGCCAGAG...AAGTGCAGCGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACACATCTCGCCCAACCTaGATACGAGGAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDTSRPT*IRGVRM
Trigger: CATCCTCACTCCTCGTATCAAGGTTGGGCGAGATGT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGTCGGCCACAAACTaGTCGGAGGAGGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNRSATN*SEEALS
Trigger: GCTCAATGCCTCCTCCGACAAGTTTGTGGCCGACCT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGAGCTCTCCGTCATCTaGGCCATCTGGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRELSVI*AIWSRP
Trigger: GGGCCTGGACCAGATGGCCAAGATGACGGAGAGCTC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAATGCCCTTCTTGGTCTaGGAGGCGCTGGGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRMPFLV*EALGSE
Trigger: CTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCAT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTTCTGCTTTTCAGCCTaGTTCCTGGCGGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNFCFSA*FLAARS
Trigger: AGAGCGGGCCGCCAGGAACAAGGCTGAAAAGCAGAA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATTGTTCCACCTCCTGCTaGGCCTGGCCCAGGACCCGC +
Preference number: 5 (lower is better)
Translates to: KVLQLLLRVGELDVESGDCSTSC*AWPRTR
Trigger: GCGGGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACA...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTCCCCATCGCTGCACTaGGACTGCAGCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSPSLH*DCSSCT
Trigger: GGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGGA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTGCAGCTTGTGGACTTaGTCATTGAGCTCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQCSLWT*SLSSAR
Trigger: CCGGGCGGAGCTCAATGACAAAGTCCACAAGCTGCA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTGCCGGGTTTCTTCTaGAAGCAGCTCCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLPGFF*KQLLGV
Trigger: GACACCCAGGAGCTGCTTCAAGAAGAAACCCGGCAG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACTCGTCCAGCTGGTCTaGCAGGCTGTTCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLVQLV*QAVPLL
Trigger: GAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGAG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCGGAGAGCTGGATGTaGAGAGTGGAGATGTGGCGC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSESWM*RVEMWR
Trigger: GCGCCACATCTCCACTCTCAACATCCAGCTCTCCGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACACGAGTTGCCGCTGGTaGTCCAAATCAACAACCAGG +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDTSCRW*SKSTTR
Trigger: CCTGGTTGTTGATTTGGACAACCAGCGGCAACTCGT...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCAGCTCATGGACGTTCTaGCCCACGTCATCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSSWTF*PTSSLE
Trigger: CTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCT...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTAGCTCATGGACGTTCTaGCCCACGTCATCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GPLPASSLLQLPGHVAFASSWTF*PTSSLE
Trigger: CTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCT...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATACTTCCAGCCGCAGTTaGGCGTCCTCCGTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNTSSRS*ASSVAC
Trigger: GCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAGT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATCGAGGTCCGCTTGTTaGCGAGCCCTCTCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSASRSAC*RALSAA
Trigger: CGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCGA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGCCTGCTGTGTGGCTTaGCGGACCCGGTCGCTCATG +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRACCVA*RTRSLM
Trigger: CATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATCTGTGGCCAGCTCGTaGCTGAGCTGCTCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSASVASS*LSCSAC
Trigger: GCAGGCCGAGCAGCTCAGCAACGAGCTGGCCACAGA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATTGCTCCGGAGCTCCTaGTTCTGCCGCTCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLLRSS*FCRSSC
Trigger: GCAGCTCGAGCGGCAGAACAAGGAGCTCCGGAGCAA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCCATCTCGTGGAGCTaGCTCCGGAGCTCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSISWS*LRSSLF
Trigger: GAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTCGCCTGAGCTTGCTCTaGAGTGCGTTCACCTCGCGG +
Preference number: 5 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIRLSLL*SAFTSR
Trigger: CCGCGAGGTGAACGCACTCAAGAGCAAGCTCAGGCG...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATGGGGGCCCTCTGAGCTaGCTCTTGAGTGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNGGPLS*LLSAFT
Trigger: GGTGAACGCACTCAAGAGCAAGCTCAGAGGGCCCCC...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS TCA 90 bp CACCGGCCCCCTCTGCCGGGATGCCTTTGCACAAACGCGGTCACGTaGTTAATCATGGCAGGAAAGGGCCAATGTGGTAAGTTAAGCTGG +
Preference number: 5 (lower is better)
Translates to: HRPPLPGCLCTNAVT*LIMAGKGQCGKLSW
Trigger: CCAGCTTAACTTACCACATTGGCCCTTTCCTGCCATGATTAATCACGTGACCGCGTTTGTGCAAAGGCATCCCGGCAGAGGGGGCCGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS TCA 90 bp AAAGGTGGCACCAGGCAGACAATGGGATGCCTGAGGGTCAAATTGTaGGGGCTCCTAGGAGTACTGGTTGGCCCGGTAGAAGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: KGGTRQTMGCLRVKL*GLLGVLVGPVEAAG
Trigger: TCCTGCTGCTTCTACCGGGCCAACCAGTACTCCTAGGAGCCCTCACAATTTGACCCTCAGGCATCCCATTGTCTGCCTGGTGCCACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS GCA 90 bp GGTAGAAGCAGCAGGATCACCCAGAGGGTCAAGGAACCGAGAGGCTaGGTCGCCCACCTGGATGTTGAAATCATGGAGAACTGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: GRSSRITQRVKEPRG*VAHLDVEIMENCEE
Trigger: CTCCTCACAGTTCTCCATGATTTCAACATCCAGGTGGGCGACGCAGCCTCTCGGTTCCTTGACCCTCTGGGTGATCCTGCTGCTTCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 90 bp CCTCCTGCTTTCCCTTCCTTATTTTTCCAGGCATCAGGGCTGGGCTaGACAGGAGCCGGGAAAGTGTCTAGAGGGGACAAGGATGGGCAT +
Preference number: 5 (lower is better)
Translates to: PPAFPSLFFQASGLG*TGAGKVSRGDKDGH
Trigger: ATGCCCATCCTTGTCCCCTCTAGACACTTTCCCGGCTCCTGTCCAGCCCAGCCCTGATGCCTGGAAAAATAAGGAAGGGAAAGCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CCA 90 bp GGGGAACCGGATGTTGAGGATGCGCGACGGGGGTTACTAGACAGCTaGTTTGGAGCTGGGTCAGAGGCTGATGGCATTAATGGAGTGAAG +
Preference number: 5 (lower is better)
Translates to: GEPDVEDARRGLLDS*FGAGSEADGINGVK
Trigger: CTTCACTCCATTAATGCCATCAGCCTCTGACCCAGCTCCAAACCAGCTGTCTAGTAACCCCCGTCGCGCATCCTCAACATCCGGTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTACCGCTCCCTCAGGTaGTGTAGCACGGAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNYRSLR*CSTEAS
Trigger: CGAAGCCTCCGTGCTACACAACCTGAGGGAGCGGTA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTGGTCTTCTGGTCCTCCCGATCTaGAAGCATGCTCCGGTAGGC +
Preference number: 5 (lower is better)
Translates to: LFQLLKLILCLLLPLLGLLVLPI*KHAPVG
Trigger: GCCTACCGGAGCATGCTTCAAGATCGGGAGGACCAG...AAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCATACTTGTGTCTTTCTaGCCCTTGTGGGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTILVSF*PLWEEA
Trigger: GGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTAT...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCAGGAAGGAAGCCCCTaGCCGATGGGTCTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNQEGSP*PMGLVQ
Trigger: CTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCTG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTCAGGAAGGAAGCCCCTaGCCGATGGGTCTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIQEGSP*PMGLVQ
Trigger: CTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCTG...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAGCACACCTGGAGGGTaGTTCGGTCGCTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRSTPGG*FGRSMS
Trigger: GCTCATCGAGCGACCGAACAACCCTCCAGGTGTGCT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAATGCAGCGCACGAAGTaGGGCGTGGTGTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: LALVPLKSASRVSVSSSEMQRTK*GVVLRS
Trigger: GCTACGCAACACCACGCCCAACTTCGTGCGCTGCAT...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTTCTGCTGCCGCTCCTaGGTCTTCTGCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQFCCRS*VFCSSS
Trigger: GGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGAA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCCAGTTTCTTGATCTaGGCCTCAGCCGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSSFLI*ASAVTF
Trigger: GAAGGTCACGGCTGAGGCCAAGATCAAGAAACTGGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCTCATCCTCCAGTTTCTaGATCTTGGCCTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTSSSSF*ILASAV
Trigger: CACGGCTGAGGCCAAGATCAAGAAACTGGAGGATGA...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTTCGCCTTGGCCCTCTaGAACTGCTCAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNFALAL*NCSSCS
Trigger: AGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGAA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTGTGGACTTTGTCATaGAGCTCCGCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSALWTLS*SSARAR
Trigger: GCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTTGTGGACTTTGTCATaGAGCTCCGCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRLWTLS*SSARAR
Trigger: GCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAGGGACGCCACGTCCTaGGCCAGCTTAATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRRDATS*ASLMAF
Trigger: GAAGGCCATTAAGCTGGCCAAGGACGTGGCGTCCCT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATAGGGACGCCACGTCCTaGGCCAGCTTAATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNRDATS*ASLMAF
Trigger: GAAGGCCATTAAGCTGGCCAAGGACGTGGCGTCCCT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACTCGTCCAGCTGGTCTaGCAGGCTGTTCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSALVQLV*QAVPLL
Trigger: GAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGAG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACGCTCCAGGTTCTGCTaGGCCTCCATCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSARSRFC*ASISSS
Trigger: GGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGCG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCGCTCCAGGTTCTGCTaGGCCTCCATCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRRSRFC*ASISSS
Trigger: GGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGCG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCACGAGTTGCCGCTGGTaGTCCAAATCAACAACCAGG +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTTSCRW*SKSTTR
Trigger: CCTGGTTGTTGATTTGGACAACCAGCGGCAACTCGT...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGTCCCCTTCCAGCTTCTTCTTTGCTGCAGCTGCCAGGGCACGTTGCTTTCGCTACGAGTTGCCGCTGGTaGTCCAAATCAACAACCAGG +
Preference number: 5 (lower is better)
Translates to: GPLPASSLLQLPGHVAFATSCRW*SKSTTR
Trigger: CCTGGTTGTTGATTTGGACAACCAGCGGCAACTCGT...AGCGAAAGCAACGTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAGGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCAGGTTGGACACGAGTaGCCGCTGGTTGTCCAAATC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNQVGHE*PLVVQI
Trigger: GATTTGGACAACCAGCGGCAACTCGTGTCCAACCTG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCAGGTTGGACACGAGTaGCCGCTGGTTGTCCAAATC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQQVGHE*PLVVQI
Trigger: GATTTGGACAACCAGCGGCAACTCGTGTCCAACCTG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTGCTTCTTTTCCAGGTaGGACACGAGTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNCFFSR*DTSCRW
Trigger: CCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGCA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCGCTCGAGTTCCTCTTaGGCTTCCAAGGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQRSSSS*ASKASS
Trigger: TGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGCG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAACTTCCAGCCGCAGTTaGGCGTCCTCCGTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSATSSRS*ASSVAC
Trigger: GCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAGT...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCTTTCGAACTGGCCCTaGAGCGCCTGCATGTTGACT +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLSNWP*SACMLT
Trigger: AGTCAACATGCAGGCGCTCAAGGGCCAGTTCGAAAG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACTGCTCGTCCCGGGCTaGGAGATCCCTTTCGAACTG +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLLVPG*EIPFEL
Trigger: CAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCAG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CTTGGACTTCTCCAGCTCATGGACGTTCTTGCCCACGTCATCCTTGGAGCTGACCTTCCAGCTTCTTCTTaGCTGCAGCTGCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: LGLLQLMDVLAHVILGADLPASS*LQLPGH
Trigger: GTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAG...GTCAGCTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCTGGAGAAGTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTTCTGCTTCAGCGACTaGGTGGCCGCCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQFCFSD*VAACFS
Trigger: AGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGAA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTTTCCTCGCCTGAGCTaGCTCTTGAGTGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQFPRLS*LLSAFT
Trigger: GGTGAACGCACTCAAGAGCAAGCTCAGGCGAGGAAA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTTTCCTCGCCTGAGCTaGCTCTTGAGTGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNFPRLS*LLSAFT
Trigger: GGTGAACGCACTCAAGAGCAAGCTCAGGCGAGGAAA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000621545.2
CDS TCA 90 bp GAAGCTGCTTTTCCAGCTCTCCGTAGGCAAAAGATGGGCCTTGCGTaGTACTTGTGTCTTTCTTGCCCTTGTGGGAGGAGGCCACCACGG +
Preference number: 5 (lower is better)
Translates to: EAAFPALRRQKMGLA*YLCLSCPCGRRPPR
Trigger: CCGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTATCACGCAAGGCCCATCTTTTGCCTACGGAGAGCTGGAAAAGCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS TCA 90 bp TTCAAAGCAGGTTGCCTGAGCTCCATTCATTGGGTTAAAGGAAGCTaGGACTGTACACAGCCCACCGGCCCCCTCTGCCGGGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: FKAGCLSSIHWVKGS*DCTQPTGPLCRDAF
Trigger: AAAGGCATCCCGGCAGAGGGGGCCGGTGGGCTGTGTACAGTCTCAGCTTCCTTTAACCCAATGAATGGAGCTCAGGCAACCTGCTTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS TCA 90 bp AAAGAGGTGCTTCCACAAGTGTCAGTGCCACCCAGGCTGAGCGAGTaGCTTGTCCCTTGCTTTCTCTGTCCTGGAGTCGCCTGGAGAATG +
Preference number: 5 (lower is better)
Translates to: KEVLPQVSVPPRLSE*LVPCFLCPGVAWRM
Trigger: CATTCTCCAGGCGACTCCAGGACAGAGAAAGCAAGGGACAAGTCACTCGCTCAGCCTGGGTGGCACTGACACTTGTGGAAGCACCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS GCA 90 bp GGACGCAAAGTGACATCTGGAATGGCGAACACTGGAGACACCCCATaGCGTGGTCAGATCTCCATCCTACCATCTTCCCACCCACAAACC +
Preference number: 5 (lower is better)
Translates to: GRKVTSGMANTGDTP*RGQISILPSSHPQT
Trigger: GGTTTGTGGGTGGGAAGATGGTAGGATGGAGATCTGACCACGGCATGGGGTGTCTCCAGTGTTCGCCATTCCAGATGTCACTTTGCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS GCA 90 bp AAACACAGTTCAGGCTTTGCTGCCCAACTTCAGCCGTTAACCCCATaGTGTGGGCAAGCAGGAGGCAGATGGTACAGAGGATGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: KHSSGFAAQLQPLTP*CGQAGGRWYRGWEV
Trigger: CACCTCCCATCCTCTGTACCATCTGCCTCCTGCTTGCCCACAGCATGGGGTTAACGGCTGAAGTTGGGCAGCAAAGCCTGAACTGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571910.2
ENST00000631759.1
CDS CCA 90 bp AAGGAACCCGAACCCTTCCCCGGCTCCCAGTCTTCACAGAACAGCTaGGACATCACACCCTCCAAAACCCTGCCTTATAAATCCCACTGG +
Preference number: 5 (lower is better)
Translates to: KEPEPFPGSQSSQNS*DITPSKTLPYKSHW
Trigger: CCAGTGGGATTTATAAGGCAGGGTTTTGGAGGGTGTGATGTCCCAGCTGTTCTGTGAAGACTGGGAGCCGGGGAAGGGTTCGGGTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACTCATCGTCACTGAGTaGGCCCTTCTGCGCCATGGT +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLIVTE*ALLRHG
Trigger: ACCATGGCGCAGAAGGGCCAACTCAGTGACGATGAG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCTGGTCCTCCCGATCTaGAAGCATGCTCCGGTAGGC +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRLVLPI*KHAPVG
Trigger: GCCTACCGGAGCATGCTTCAAGATCGGGAGGACCAG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACCCTCCAGAATCGGGTTaGCTTGTAGAAGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDPPESG*LVEAAF
Trigger: AAAAGCAGCTTCTACAAGCAAACCCGATTCTGGAGG...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCTCTGGCTTGGCGAATaGCCCGTGATTTTTCTAGCA +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTLWLGE*PVIFLA
Trigger: TGCTAGAAAAATCACGGGCAATTCGCCAAGCCAGAG...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCGCTCATATGTTGCCTaGGCCAAAGCCTCTACAGCA +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQRSYVA*AKASTA
Trigger: TGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGCG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTCGCTCATATGTTGCCTaGGCCAAAGCCTCTACAGCA +
Preference number: 5 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPRSYVA*AKASTA
Trigger: TGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGCG...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACCTTGCCGATGGGTCTaGTCCAGGGCTTTGTTCACG +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRPCRWV*SRALFT
Trigger: CGTGAACAAAGCCCTGGACAAGACCCATCGGCAAGG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAGCGGGTCCATATTCTaGGTCAGCCAGGCACTCGCA +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRSGSIF*VSQALA
Trigger: TGCGAGTGCCTGGCTGACCAAGAATATGGACCCGCT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCAGGGAAGTCACGTaGTCATTCAGCGGGTCCATA +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSREVT*SFSGSI
Trigger: TATGGACCCGCTGAATGACAACGTGACTTCCCTGCT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGAGCTCTCCGTCATCTaGGCCATCTGGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLELSVI*AIWSRP
Trigger: GGGCCTGGACCAGATGGCCAAGATGACGGAGAGCTC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAAAGTTGGGCGTGGTGTaGCGTAGCGTGGTCATCAGC +
Preference number: 5 (lower is better)
Translates to: LALVPLKSASRVSVSSSEKLGVV*RSVVIS
Trigger: GCTGATGACCACGCTACGCAACACCACGCCCAACTT...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATCCAGCTCCTGCTTCTaGGCCGCCAGCCGCACCCGC +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRESSSCF*AASRTR
Trigger: GCGGGTGCGGCTGGCGGCCAAGAAGCAGGAGCTGGA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCCAGCTCCTGCTTCTaGGCCGCCAGCCGCACCCGC +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSSSCF*AASRTR
Trigger: GCGGGTGCGGCTGGCGGCCAAGAAGCAGGAGCTGGA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCCAGTTTCTTGATCTaGGCCTCAGCCGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSSFLI*ASAVTF
Trigger: GAAGGTCACGGCTGAGGCCAAGATCAAGAAACTGGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCCTCTTCAAGGGCCCGAGCCAGGGACAGGGCCTTGGTTTCCTTCTCCCTGGCTAGCTTGGTAAGATTCTaGGCCTTTTCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: ASSRARARDRALVSFSLASLVRF*AFSSSS
Trigger: AGAAGAGGAAGAAAAGGCCAAGAATCTTACCAAGCT...AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGCTCGGGCCCTTGAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTGTTCCACCTCCTGCTaGGCCTGGCCCAGGACCCGC +
Preference number: 5 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSCSTSC*AWPRTR
Trigger: GCGGGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTCCCCATCGCTGCACTaGGACTGCAGCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLSPSLH*DCSSCT
Trigger: GGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGGA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp CTTGTGGACTTTGTCATTGAGCTCCGCCCGGGCCCGCTCCCCATCGCTGCACTTACTTCATTCTGCAGCTaGTGGACTTTGTCATTGAGC +
Preference number: 5 (lower is better)
Translates to: LVDFVIELRPGPLPIAALTSFCS*WTLSLS
Trigger: GCTCAATGACAAAGTCCACAAGCTGCAGAATGAAGT...AAGTGCAGCGATGGGGAGCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCAGGGACGCCACGTCCTaGGCCAGCTTAATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRRDATS*ASLMAF
Trigger: GAAGGCCATTAAGCTGGCCAAGGACGTGGCGTCCCT...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACTGCCGGGTTTCTTCTaGAAGCAGCTCCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLPGFF*KQLLGV
Trigger: GACACCCAGGAGCTGCTTCAAGAAGAAACCCGGCAG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTTCGTAGACACGTaGAGCTTCTGCCGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSFVDT*SFCRVS
Trigger: AGAAACCCGGCAGAAGCTCAACGTGTCTACGAAGCT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAGCTTCGTAGACACGTaGAGCTTCTGCCGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSFVDT*SFCRVS
Trigger: AGAAACCCGGCAGAAGCTCAACGTGTCTACGAAGCT...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTCGGAGAGCTGGATGTaGAGAGTGGAGATGTGGCGC +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNSESWM*RVEMWR
Trigger: GCGCCACATCTCCACTCTCAACATCCAGCTCTCCGA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTTCGGAGAGCTGGATGTaGAGAGTGGAGATGTGGCGC +
Preference number: 5 (lower is better)
Translates to: NGLPLGLVKHPCDALNFISESWM*RVEMWR
Trigger: GCGCCACATCTCCACTCTCAACATCCAGCTCTCCGA...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTTGGAAAGGTTTGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCGCTTTGAGCATTTTGTaGGTCCGCTCGAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VGKVCRLGNELGVGAGGTALSIL*VRSSSS
Trigger: AGAGGAACTCGAGCGGACCAACAAAATGCTCAAAGC...GGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCAAACCTTTCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCAGGTTAGGGAATGAATTGGGAGTGGGGGCCGGCGGCACCCATTTCGGTGACTCTTCCATTTCGGCTTaGAGCATTTTGTTGGTCCGC +
Preference number: 5 (lower is better)
Translates to: CRLGNELGVGAGGTHFGDSSISA*SILLVR
Trigger: GCGGACCAACAAAATGCTCAAAGCCGAAATGGAAGA...GTCACCGAAATGGGTGCCGCCGGCCCCCACTCCCAATTCATTCCCTAACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCACTTCCAGCCGCAGTTaGGCGTCCTCCGTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLTSSRS*ASSVAC
Trigger: GCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAGT...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACTGCTCGTCCCGGGCTaGGAGATCCCTTTCGAACTG +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSALLVPG*EIPFEL
Trigger: CAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCAG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAGTTTGCGTAGCTGCTaGATGGCTTCCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRSLRSC*MASSLP
Trigger: GGGGAGGGAGGAAGCCATCAAGCAGCTACGCAAACT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACTTCTCGAGGTCCGCTaGTTTGCGAGCCCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSALLEVR*FASPLS
Trigger: GCTGAGAGGGCTCGCAAACAAGCGGACCTCGAGAAG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGCCTGCTGTGTGGCTTaGCGGACCCGGTCGCTCATG +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKACCVA*RTRSLM
Trigger: CATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATTTGCTCCGGAGCTCCTaGTTCTGCCGCTCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: KVLQLLLRVGELDVESGDLLRSS*FCRSSC
Trigger: GCAGCTCGAGCGGCAGAACAAGGAGCTCCGGAGCAA...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGCCGCGATGGTGGACTaGAACTTGGACTTGACGGCC +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRAAMVD*NLDLTA
Trigger: GGCCGTCAAGTCCAAGTTCAAGTCCACCATCGCGGC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTTCCTGCGGTTGGCGTaGATGCGCTGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLFLRLA*MRWDSS
Trigger: GGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGCGGCCCATGGCCTCGTaGCTCTCCGTGGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSRPMAS*LSVASS
Trigger: GGATGAGGCCACGGAGAGCAACGAGGCCATGGGCCG...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACCTCTGAGCTTGCTCTaGAGTGCGTTCACCTCGCGG +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAPLSLL*SAFTSR
Trigger: CCGCGAGGTGAACGCACTCAAGAGCAAGCTCAGAGG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCCTCTGAGCTTGCTCTaGAGTGCGTTCACCTCGCGG +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRPLSLL*SAFTSR
Trigger: CCGCGAGGTGAACGCACTCAAGAGCAAGCTCAGAGG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCGGGGGCCCTCTGAGCTaGCTCTTGAGTGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLGGPLS*LLSAFT
Trigger: GGTGAACGCACTCAAGAGCAAGCTCAGAGGGCCCCC...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS TCA 90 bp AGTGACTTGTCCCTTGCTTTCTCTGTCCTGGAGTCGCCTGGAGAATaGTGCCTGTTCACCCTACACCACAAGGGGCTGCAGGTTACTGGA +
Preference number: 5 (lower is better)
Translates to: SDLSLAFSVLESPGE*CLFTLHHKGLQVTG
Trigger: TCCAGTAACCTGCAGCCCCTTGTGGTGTAGGGTGAACAGGCATCATTCTCCAGGCGACTCCAGGACAGAGAAAGCAAGGGACAAGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 90 bp ATATTTTTGGTTGTCACAACTGGAGGGAAGGGGGCTGTCGGCATCTaGCGGGTCGAGGCCAGGGATGTTGTGAAACATTCTACGAGCCAC +
Preference number: 5 (lower is better)
Translates to: IFLVVTTGGKGAVGI*RVEARDVVKHSTSH
Trigger: GTGGCTCGTAGAATGTTTCACAACATCCCTGGCCTCGACCCGCCAGATGCCGACAGCCCCCTTCCCTCCAGTTGTGACAACCAAAAATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS CCA 90 bp CAAAGTGACATCTGGAATGGCGAACACTGGAGACACCCCATGCCGTaGTCAGATCTCCATCCTACCATCTTCCCACCCACAAACCTGCAG +
Preference number: 5 (lower is better)
Translates to: QSDIWNGEHWRHPMP*SDLHPTIFPPTNLQ
Trigger: CTGCAGGTTTGTGGGTGGGAAGATGGTAGGATGGAGATCTGACCACGGCATGGGGTGTCTCCAGTGTTCGCCATTCCAGATGTCACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACGCCATGGTGCCTTGTaGGTCCCAGATCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSARHGAL*VPDLQL
Trigger: CAGTTGGAGATCTGGGACCAACAAGGCACCATGGCG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCTGCGCCATGGTGCCTaGTTGGTCCCAGATCTCCAA +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRLRHGA*LVPDLQ
Trigger: TTGGAGATCTGGGACCAACAAGGCACCATGGCGCAG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGACCCAGACGAGTCTCTaGGCGGCCCAGTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSTQTSL*AAQSAW
Trigger: CCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGGT...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTAGCACGGAGGCTTCGTaGAGGCACGTCAGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSTEAS*RHVSSA
Trigger: GGCGGAGCTGACGTGCCTCAACGAAGCCTCCGTGCT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTTCACTGTTTTGGCGTaGCCGAAAGCCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNFTVLA*PKASRI
Trigger: GATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGAA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGTCTTGTCCAGGGCTTaGTTCACGCGGGTGAGTATC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRVLSRA*FTRVSI
Trigger: GATACTCACCCGCGTGAACAAAGCCCTGGACAAGAC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCCTTGCCGATGGGTCTaGTCCAGGGCTTTGTTCACG +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRPCRWV*SRALFT
Trigger: CGTGAACAAAGCCCTGGACAAGACCCATCGGCAAGG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCAGGTCGGCCACAAACTaGTCGGAGGAGGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRRSATN*SEEALS
Trigger: GCTCAATGCCTCCTCCGACAAGTTTGTGGCCGACCT...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGAGCTCTCCGTCATCTaGGCCATCTGGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVELSVI*AIWSRP
Trigger: GGGCCTGGACCAGATGGCCAAGATGACGGAGAGCTC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAATGCCCTTCTTGGTCTaGGAGGCGCTGGGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKMPFLV*EALGSE
Trigger: CTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCAT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTATGCCCTTCTTGGTCTaGGAGGCGCTGGGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVMPFLV*EALGSE
Trigger: CTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCAT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAAAGTTGGGCGTGGTGTaGCGTAGCGTGGTCATCAGC +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAKLGVV*RSVVIS
Trigger: GCTGATGACCACGCTACGCAACACCACGCCCAACTT...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGTCAAGTTCCAGGGCTTaGATCATGAGAATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQSSSRA*IMRMQA
Trigger: GGCCTGCATTCTCATGATCAAAGCCCTGGAACTTGA...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATTCTGCTGCCGCTCCTaGGTCTTCTGCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: LALVPLKSASRVSVSSSEFCCRS*VFCSSS
Trigger: GGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGAA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCCAGCTCCTGCTTCTaGGCCGCCAGCCGCACCCGC +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVSSSCF*AASRTR
Trigger: GCGGGTGCGGCTGGCGGCCAAGAAGCAGGAGCTGGA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTCTGCTTTTCAGCCTaGTTCCTGGCGGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAFCFSA*FLAARS
Trigger: AGAGCGGGCCGCCAGGAACAAGGCTGAAAAGCAGAA...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTGTTCCACCTCCTGCTaGGCCTGGCCCAGGACCCGC +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRCSTSC*AWPRTR
Trigger: GCGGGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTGTGGACTTTGTCATaGAGCTCCGCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKLWTLS*SSARAR
Trigger: GCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTGCAGCTTGTGGACTTaGTCATTGAGCTCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRCSLWT*SLSSAR
Trigger: CCGGGCGGAGCTCAATGACAAAGTCCACAAGCTGCA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCGCTCCAGGTTCTGCTaGGCCTCCATCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVRSRFC*ASISSS
Trigger: GGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGCG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTCGGAGAGCTGGATGTaGAGAGTGGAGATGTGGCGC +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRSESWM*RVEMWR
Trigger: GCGCCACATCTCCACTCTCAACATCCAGCTCTCCGA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTCGCTCGAGTTCCTCTTaGGCTTCCAAGGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: VLLFQLLKLILCLLLPLLRSSSS*ASKASS
Trigger: TGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGCG...AAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAGAAGCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAGCTCATGGACGTTCTaGCCCACGTCATCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRSSWTF*PTSSLE
Trigger: CTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTGAGCGCCTGCATGTaGACTTCCAGCCGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNLSACM*TSSRSL
Trigger: CAAACTGCGGCTGGAAGTCAACATGCAGGCGCTCAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATTGAGCGCCTGCATGTaGACTTCCAGCCGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLSACM*TSSRSL
Trigger: CAAACTGCGGCTGGAAGTCAACATGCAGGCGCTCAA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGACTTTCGAACTGGCCCTaGAGCGCCTGCATGTTGACT +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRLSNWP*SACMLT
Trigger: AGTCAACATGCAGGCGCTCAAGGGCCAGTTCGAAAG...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTCGAGGTCCGCTTGTTaGCGAGCCCTCTCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSSRSAC*RALSAA
Trigger: CGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCGA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATATCGAGGTCCGCTTGTTaGCGAGCCCTCTCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSISRSAC*RALSAA
Trigger: CGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCGA...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGCCTGCTGTGTGGCTTaGCGGACCCGGTCGCTCATG +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCACCVA*RTRSLM
Trigger: CATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGCCTGCTGTGTGGCTTaGCGGACCCGGTCGCTCATG +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTACCVA*RTRSLM
Trigger: CATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCTGTGGCCAGCTCGTaGCTGAGCTGCTCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTSVASS*LSCSAC
Trigger: GCAGGCCGAGCAGCTCAGCAACGAGCTGGCCACAGA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATGCCTCTTGAGCTGCTaGACCCTGGCATTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRCLLSC*TLALPF
Trigger: GAAAGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTCCTGCGGTTGGCGTaGATGCGCTGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKFLRLA*MRWDSS
Trigger: GGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTTCCTGCGGTTGGCGTaGATGCGCTGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVFLRLA*MRWDSS
Trigger: GGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTGCAGCTTCCTGCGGTaGGCGTTGATGCGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVCSFLR*ALMRWD
Trigger: GTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTTCCTCGCCTGAGCTaGCTCTTGAGTGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNFPRLS*LLSAFT
Trigger: GGTGAACGCACTCAAGAGCAAGCTCAGGCGAGGAAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGGCTTATTCACTGGCCTaGGTTCCATTGAAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQAYSLA*VPLKSA
Trigger: CGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGC...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGCTTATTCACTGGCCTaGGTTCCATTGAAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNAYSLA*VPLKSA
Trigger: CGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCTGCTGGGTTTTGCTTaGTTCTGGGTTGTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQLLGFA*FWVVVG
Trigger: CCCAACAACAACCCAGAACAAAGCAAAACCCAGCAG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACCTGCTGGGTTTTGCTTaGTTCTGGGTTGTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNLLGFA*FWVVVG
Trigger: CCCAACAACAACCCAGAACAAAGCAAAACCCAGCAG...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS TCA 90 bp CTCAGAACCCCACAGGTCAAGTTGTCAGGCGGAACCAACATCTGCTaGGCTGAAACCACCCCAGGCCTGACAGCAACAGAACGTGTAAAA +
Preference number: 5 (lower is better)
Translates to: LRTPQVKLSGGTNIC*AETTPGLTATERVK
Trigger: TTTTACACGTTCTGTTGCTGTCAGGCCTGGGGTGGTTTCAGCTCAGCAGATGTTGGTTCCGCCTGACAACTTGACCTGTGGGGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631759.1
CDS TCA 90 bp AGAGCTCCCAAAGCTGGCCTTGACCATCTTGGGTCCATGTGTCAATaGATGAACCTGACACATCAGGGTCCTACTGGTGAGGGTGTGGTC +
Preference number: 5 (lower is better)
Translates to: RAPKAGLDHLGSMCQ*MNLTHQGPTGEGVV
Trigger: GACCACACCCTCACCAGTAGGACCCTGATGTGTCAGGTTCATTCATTGACACATGGACCCAAGATGGTCAAGGCCAGCTTTGGGAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS GCA 90 bp CCCAGTCTTCACAGAACAGCTGGGACATCACACCCTCCAAAACCCTaGCTTATAAATCCCACTGGGACACGGGGATCTAGACACCGTCAA +
Preference number: 5 (lower is better)
Translates to: PSLHRTAGTSHPPKP*LINPTGTRGSRHRQ
Trigger: TTGACGGTGTCTAGATCCCCGTGTCCCAGTGGGATTTATAAGGCAGGGTTTTGGAGGGTGTGATGTCCCAGCTGTTCTGTGAAGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTACCCAGACGAGTCTCTaGGCGGCCCAGTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRTQTSL*AAQSAW
Trigger: CCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGGT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTACCGCTCCCTCAGGTaGTGTAGCACGGAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVYRSLR*CSTEAS
Trigger: CGAAGCCTCCGTGCTACACAACCTGAGGGAGCGGTA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGTGTCTTTCTTGCCCTaGTGGGAGGAGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKVSFLP*WEEATT
Trigger: CGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGACAC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCCTCCAGAATCGGGTTaGCTTGTAGAAGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQPPESG*LVEAAF
Trigger: AAAAGCAGCTTCTACAAGCAAACCCGATTCTGGAGG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCTGCTGCCTCTTGGCAAAAGCCTTTCTGGCCAAGTAGCCACGACACATCGCCTCCTCCAGAATCGGGTTaGCTTGTAGAAGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: AAASWQKPFWPSSHDTSPPPESG*LVEAAF
Trigger: AAAAGCAGCTTCTACAAGCAAACCCGATTCTGGAGG...AGGCGATGTGTCGTGGCTACTTGGCCAGAAAGGCTTTTGCCAAGAGGCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAACATCTCGCCCAACCTaGATACGAGGAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRTSRPT*IRGVRM
Trigger: CATCCTCACTCCTCGTATCAAGGTTGGGCGAGATGT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCGCTCATATGTTGCCTaGGCCAAAGCCTCTACAGCA +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNRSYVA*AKASTA
Trigger: TGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGCG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACGCTCATATGTTGCCTaGGCCAAAGCCTCTACAGCA +
Preference number: 5 (lower is better)
Translates to: LALVPLKSASRVSVSSSERSYVA*AKASTA
Trigger: TGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGCG...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAACAGGAAGGAAGCCCCTaGCCGATGGGTCTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKQEGSP*PMGLVQ
Trigger: CTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCTG...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAAGCACACCTGGAGGGTaGTTCGGTCGCTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSTPGG*FGRSMS
Trigger: GCTCATCGAGCGACCGAACAACCCTCCAGGTGTGCT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGCACACCTGGAGGGTaGTTCGGTCGCTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSTPGG*FGRSMS
Trigger: GCTCATCGAGCGACCGAACAACCCTCCAGGTGTGCT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATAGCGGGTCCATATTCTaGGTCAGCCAGGCACTCGCA +
Preference number: 5 (lower is better)
Translates to: KVLQLLLRVGELDVESGDSGSIF*VSQALA
Trigger: TGCGAGTGCCTGGCTGACCAAGAATATGGACCCGCT...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGATGCCCTTCTTGGTCTaGGAGGCGCTGGGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTMPFLV*EALGSE
Trigger: CTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCAT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCAAGTTGGGCGTGGTGTaGCGTAGCGTGGTCATCAGC +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLKLGVV*RSVVIS
Trigger: GCTGATGACCACGCTACGCAACACCACGCCCAACTT...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTATGCAGCGCACGAAGTaGGGCGTGGTGTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVMQRTK*GVVLRS
Trigger: GCTACGCAACACCACGCCCAACTTCGTGCGCTGCAT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATCATCCTCCAGTTTCTaGATCTTGGCCTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRSSSSF*ILASAV
Trigger: CACGGCTGAGGCCAAGATCAAGAAACTGGAGGATGA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATCATCCTCCAGTTTCTaGATCTTGGCCTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: LALVPLKSASRVSVSSSESSSSF*ILASAV
Trigger: CACGGCTGAGGCCAAGATCAAGAAACTGGAGGATGA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTTCTGCTTTTCAGCCTaGTTCCTGGCGGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLFCFSA*FLAARS
Trigger: AGAGCGGGCCGCCAGGAACAAGGCTGAAAAGCAGAA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCCCCATCGCTGCACTaGGACTGCAGCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSPSLH*DCSSCT
Trigger: GGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTGCAGCTTGTGGACTTaGTCATTGAGCTCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLCSLWT*SLSSAR
Trigger: CCGGGCGGAGCTCAATGACAAAGTCCACAAGCTGCA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAAGGGACGCCACGTCCTaGGCCAGCTTAATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKRDATS*ASLMAF
Trigger: GAAGGCCATTAAGCTGGCCAAGGACGTGGCGTCCCT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTGCCGGGTTTCTTCTaGAAGCAGCTCCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLLPGFF*KQLLGV
Trigger: GACACCCAGGAGCTGCTTCAAGAAGAAACCCGGCAG...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCTCGTCCAGCTGGTCTaGCAGGCTGTTCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCLVQLV*QAVPLL
Trigger: GAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGAG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCTCGTCCAGCTGGTCTaGCAGGCTGTTCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSLVQLV*QAVPLL
Trigger: GAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGAG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTCGGAGAGCTGGATGTaGAGAGTGGAGATGTGGCGC +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLSESWM*RVEMWR
Trigger: GCGCCACATCTCCACTCTCAACATCCAGCTCTCCGA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAAACGAGTTGCCGCTGGTaGTCCAAATCAACAACCAGG +
Preference number: 5 (lower is better)
Translates to: LALVPLKSASRVSVSSSETSCRW*SKSTTR
Trigger: CCTGGTTGTTGATTTGGACAACCAGCGGCAACTCGT...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGCCAGGGACAGGGCCTaGGTTTCCTTCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCARDRA*VSFSLA
Trigger: AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGCCAGGGACAGGGCCTaGGTTTCCTTCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSARDRA*VSFSLA
Trigger: AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGC...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGCCAGGGACAGGGCCTaGGTTTCCTTCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIARDRA*VSFSLA
Trigger: AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATCGGCTTTGAGCATTTaGTTGGTCCGCTCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRSALSI*LVRSSS
Trigger: GGAACTCGAGCGGACCAACAAAATGCTCAAAGCCGA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTTCGGCTTTGAGCATTTaGTTGGTCCGCTCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: NGLPLGLVKHPCDALNFISALSI*LVRSSS
Trigger: GGAACTCGAGCGGACCAACAAAATGCTCAAAGCCGA...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTCTTCCATTTCGGCTTaGAGCATTTTGTTGGTCCGC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNSSISA*SILLVR
Trigger: GCGGACCAACAAAATGCTCAAAGCCGAAATGGAAGA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGACTTCCAGCCGCAGTTaGGCGTCCTCCGTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSTSSRS*ASSVAC
Trigger: GCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAGT...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCCTTTCGAACTGGCCCTaGAGCGCCTGCATGTTGACT +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRLSNWP*SACMLT
Trigger: AGTCAACATGCAGGCGCTCAAGGGCCAGTTCGAAAG...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACTTTCGAACTGGCCCTaGAGCGCCTGCATGTTGACT +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSALSNWP*SACMLT
Trigger: AGTCAACATGCAGGCGCTCAAGGGCCAGTTCGAAAG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGCTGCCAGGGCACGTaGCTTTCGCTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSCQGT*LSLVFQ
Trigger: CTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGCT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATCGAGGTCCGCTTGTTaGCGAGCCCTCTCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRESRSAC*RALSAA
Trigger: CGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCGA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGCCGCGATGGTGGACTaGAACTTGGACTTGACGGCC +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKAAMVD*NLDLTA
Trigger: GGCCGTCAAGTCCAAGTTCAAGTCCACCATCGCGGC...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTTTCCTGCGGTTGGCGTaGATGCGCTGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPFLRLA*MRWDSS
Trigger: GGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAA...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTGCAGCTTCCTGCGGTaGGCGTTGATGCGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTCSFLR*ALMRWD
Trigger: GTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTTTCCTCGCCTGAGCTaGCTCTTGAGTGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRFPRLS*LLSAFT
Trigger: GGTGAACGCACTCAAGAGCAAGCTCAGGCGAGGAAA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGACAGTCTGCTGGGTTTaGCTTTGTTCTGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQTVCWV*LCSGLL
Trigger: CAACAACCCAGAACAAAGCAAAACCCAGCAGACTGT...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGACTACAGAAGGCACTaGGTGAACTGTGCGTGTCTG +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRDYRRH*VNCACL
Trigger: CAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGGGGGCCCTCTGAGCTaGCTCTTGAGTGCGTTCACC +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIGGPLS*LLSAFT
Trigger: GGTGAACGCACTCAAGAGCAAGCTCAGAGGGCCCCC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS TCA 90 bp TCTCATTTCACAAAACGGGCCCCCTTCTGGAGGGATGCTTCTAGCTaGGCCAAGAAATCACCCACACTCAACAGGCCTGCTCGCCAAAAA +
Preference number: 5 (lower is better)
Translates to: SHFTKRAPFWRDASS*AKKSPTLNRPARQK
Trigger: TTTTTGGCGAGCAGGCCTGTTGAGTGTGGGTGATTTCTTGGCTCAGCTAGAAGCATCCCTCCAGAAGGGGGCCCGTTTTGTGAAATGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS TCA 90 bp GTCCATGTGTCAATGAATGAACCTGACACATCAGGGTCCTACTGGTaGGGGTGTGGTCTCTGCCCAATGACAACACACACCCCAGACAGA +
Preference number: 5 (lower is better)
Translates to: VHVSMNEPDTSGSYW*GCGLCPMTTHTPDR
Trigger: TCTGTCTGGGGTGTGTGTTGTCATTGGGCAGAGACCACACCCTCACCAGTAGGACCCTGATGTGTCAGGTTCATTCATTGACACATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCTCATCGTCACTGAGTaGGCCCTTCTGCGCCATGGT +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVLIVTE*ALLRHG
Trigger: ACCATGGCGCAGAAGGGCCAACTCAGTGACGATGAG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCTACCGCTCCCTCAGGTaGTGTAGCACGGAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSYRSLR*CSTEAS
Trigger: CGAAGCCTCCGTGCTACACAACCTGAGGGAGCGGTA...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGCTGGTCCTCCCGATCTaGAAGCATGCTCCGGTAGGC +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSLVLPI*KHAPVG
Trigger: GCCTACCGGAGCATGCTTCAAGATCGGGAGGACCAG...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGGTGTCTTTCTTGCCCTaGTGGGAGGAGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSVSFLP*WEEATT
Trigger: CGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGACAC...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATTTCACTGTTTTGGCGTaGCCGAAAGCCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNFTVLA*PKASRI
Trigger: GATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGAA...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATTCACTGTTTTGGCGTaGCCGAAAGCCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: LALVPLKSASRVSVSSSEFTVLA*PKASRI
Trigger: GATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGAA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCCTTGCCGATGGGTCTaGTCCAGGGCTTTGTTCACG +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVPCRWV*SRALFT
Trigger: CGTGAACAAAGCCCTGGACAAGACCCATCGGCAAGG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCAGGAAGGAAGCCCCTaGCCGATGGGTCTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCQEGSP*PMGLVQ
Trigger: CTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCTG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACAGGAAGGAAGCCCCTaGCCGATGGGTCTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIQEGSP*PMGLVQ
Trigger: CTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCTG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTAGCACACCTGGAGGGTaGTTCGGTCGCTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSSTPGG*FGRSMS
Trigger: GCTCATCGAGCGACCGAACAACCCTCCAGGTGTGCT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGCACACCTGGAGGGTaGTTCGGTCGCTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSSTPGG*FGRSMS
Trigger: GCTCATCGAGCGACCGAACAACCCTCCAGGTGTGCT...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCATGCCCTTCTTGGTCTaGGAGGCGCTGGGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVMPFLV*EALGSE
Trigger: CTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCAT...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAAGTTGGGCGTGGTGTaGCGTAGCGTGGTCATCAGC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVKLGVV*RSVVIS
Trigger: GCTGATGACCACGCTACGCAACACCACGCCCAACTT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGATGCAGCGCACGAAGTaGGGCGTGGTGTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSMQRTK*GVVLRS
Trigger: GCTACGCAACACCACGCCCAACTTCGTGCGCTGCAT...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTATGCAGCGCACGAAGTaGGGCGTGGTGTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSMQRTK*GVVLRS
Trigger: GCTACGCAACACCACGCCCAACTTCGTGCGCTGCAT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTAGGAACGCATCCAGCTaGCCGGACCTCTTCTCGTGG +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSRNASS*PDLFSW
Trigger: CCACGAGAAGAGGTCCGGCAAGCTGGATGCGTTCCT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCAGGATCTCGTAGCGTaGGCGGAACTCCTGGAAGAC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVQDLVA*AELLED
Trigger: GTCTTCCAGGAGTTCCGCCAACGCTACGAGATCCTG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATCAAGTTCCAGGGCTTaGATCATGAGAATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRSSSRA*IMRMQA
Trigger: GGCCTGCATTCTCATGATCAAAGCCCTGGAACTTGA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTCCTATCCTGTATAAGTaGGGGTCAAGTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIPILYK*GSSSRA
Trigger: AGCCCTGGAACTTGACCCCAACTTATACAGGATAGG...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACGTTCGGAAGAAGATTTaGCTCTGCCCTATCCTGTAT +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNVRKKI*LCPILY
Trigger: ATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAAC...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAGTCCTGCAGCTTCTTCTTCGAGTCGGAGAGCTGGATGTTGAGAGTGGAGATTTCGCCTTGGCCCTCTaGAACTGCTCAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: KVLQLLLRVGELDVESGDFALAL*NCSSCS
Trigger: AGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGAA...ATCTCCACTCTCAACATCCAGCTCTCCGACTCGAAGAAGAAGCTGCAGGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCTCCCCATCGCTGCACTaGGACTGCAGCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFSPSLH*DCSSCT
Trigger: GGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGGA...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCCCCATCGCTGCACTaGGACTGCAGCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSPSLH*DCSSCT
Trigger: GGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGGA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTGCAGCTTGTGGACTTaGTCATTGAGCTCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVCSLWT*SLSSAR
Trigger: CCGGGCGGAGCTCAATGACAAAGTCCACAAGCTGCA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACACTTCATTCTGCAGCTaGTGGACTTTGTCATTGAGC +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNTSFCS*WTLSLS
Trigger: GCTCAATGACAAAGTCCACAAGCTGCAGAATGAAGT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAACTGCCGGGTTTCTTCTaGAAGCAGCTCCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKLPGFF*KQLLGV
Trigger: GACACCCAGGAGCTGCTTCAAGAAGAAACCCGGCAG...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACTCGTCCAGCTGGTCTaGCAGGCTGTTCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRELVQLV*QAVPLL
Trigger: GAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGAG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACGCTCCAGGTTCTGCTaGGCCTCCATCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRERSRFC*ASISSS
Trigger: GGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGCG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATCGGAGAGCTGGATGTaGAGAGTGGAGATGTGGCGC +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSESWM*RVEMWR
Trigger: GCGCCACATCTCCACTCTCAACATCCAGCTCTCCGA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTGCCAGGGACAGGGCCTaGGTTTCCTTCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFARDRA*VSFSLA
Trigger: AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGC...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGCCAGGGACAGGGCCTaGGTTTCCTTCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREARDRA*VSFSLA
Trigger: AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAGCTTTGAGCATTTTGTaGGTCCGCTCGAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRALSIL*VRSSSS
Trigger: AGAGGAACTCGAGCGGACCAACAAAATGCTCAAAGC...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCACTTCCAGCCGCAGTTaGGCGTCCTCCGTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVTSSRS*ASSVAC
Trigger: GCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAGT...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGCTGCTCGTCCCGGGCTaGGAGATCCCTTTCGAACTG +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSLLVPG*EIPFEL
Trigger: CAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCAG...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCTGCTCGTCCCGGGCTaGGAGATCCCTTTCGAACTG +
Preference number: 5 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPLLVPG*EIPFEL
Trigger: CAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCAG...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCTGCTCGTCCCGGGCTaGGAGATCCCTTTCGAACTG +
Preference number: 5 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSLLVPG*EIPFEL
Trigger: CAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCAG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAAGCTGTCTCTGCAGTaGCCTCCTCTTCTCCTCATT +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRKLSLQ*PPLLLI
Trigger: AATGAGGAGAAGAGGAGGCAACTGCAGAGACAGCTT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTAGCTGCCAGGGCACGTaGCTTTCGCTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSCQGT*LSLVFQ
Trigger: CTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGCT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGAGCTGCCAGGGCACGTaGCTTTCGCTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTSCQGT*LSLVFQ
Trigger: CTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGCT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGGTCCGCTTGTTaGCGAGCCCTCTCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVSRSAC*RALSAA
Trigger: CGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCGA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCTTCTCGAGGTCCGCTaGTTTGCGAGCCCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCLLEVR*FASPLS
Trigger: GCTGAGAGGGCTCGCAAACAAGCGGACCTCGAGAAG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCTTCTCGAGGTCCGCTaGTTTGCGAGCCCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSLLEVR*FASPLS
Trigger: GCTGAGAGGGCTCGCAAACAAGCGGACCTCGAGAAG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTCTGTGGCCAGCTCGTaGCTGAGCTGCTCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGSVASS*LSCSAC
Trigger: GCAGGCCGAGCAGCTCAGCAACGAGCTGGCCACAGA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTTGCTCCGGAGCTCCTaGTTCTGCCGCTCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFLLRSS*FCRSSC
Trigger: GCAGCTCGAGCGGCAGAACAAGGAGCTCCGGAGCAA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATCCATCTCGTGGAGCTaGCTCCGGAGCTCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSISWS*LRSSLF
Trigger: GAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGGA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGCCGCGATGGTGGACTaGAACTTGGACTTGACGGCC +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIAAMVD*NLDLTA
Trigger: GGCCGTCAAGTCCAAGTTCAAGTCCACCATCGCGGC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTTCTGCTTCAGCGACTaGGTGGCCGCCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLFCFSD*VAACFS
Trigger: AGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGAA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTGCCTCTTGAGCTGCTaGACCCTGGCATTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLCLLSC*TLALPF
Trigger: GAAAGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATTCCTGCGGTTGGCGTaGATGCGCTGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREFLRLA*MRWDSS
Trigger: GGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTTCCTGCGGTTGGCGTaGATGCGCTGGGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRFLRLA*MRWDSS
Trigger: GGAGGAGTCCCAGCGCATCAACGCCAACCGCAGGAA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCTGCAGCTTCCTGCGGTaGGCGTTGATGCGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFCSFLR*ALMRWD
Trigger: GTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCA...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTGTCTGCACAATCCATaGATAGAACTGGAGGATGTG +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNCLHNP*IELEDV
Trigger: CACATCCTCCAGTTCTATCAATGGATTGTGCAGACA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGACTACAGAAGGCACTaGGTGAACTGTGCGTGTCTG +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRDYRRH*VNCACL
Trigger: CAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS TCA 90 bp CCCCTGCTTATCCTAGGCCCCACCCTGCCTTCCATGTCACCAAGTTaGTGGCCACACATTCTTAACGTTCAAGTTCACCAGAAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: PLLILGPTLPSMSPS*WPHILNVQVHQKLS
Trigger: AGAAAGCTTCTGGTGAACTTGAACGTTAAGAATGTGTGGCCATCAACTTGGTGACATGGAAGGCAGGGTGGGGCCTAGGATAAGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS TCA 90 bp TGCCCAGCCAAGCTTGAGTTTCATTTGGGTTGTGCTTTCACCAAATaGTTGCAGCAATGCAAGAGGGGGAACCGGATGTTGAGGATGCGC +
Preference number: 5 (lower is better)
Translates to: CPAKLEFHLGCAFTK*LQQCKRGNRMLRMR
Trigger: GCGCATCCTCAACATCCGGTTCCCCCTCTTGCATTGCTGCAATCATTTGGTGAAAGCACAACCCAAATGAAACTCAAGCTTGGCTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 90 bp GGGACACGTGGAGGAATCCGGGAACCCAAAAGGTACCTTAACCCCTaGGACGTTACAGAGATTCATGAAAGGAGTGCTTCTCAATCAAGG +
Preference number: 5 (lower is better)
Translates to: GTRGGIREPKRYLNP*DVTEIHERSASQSR
Trigger: CCTTGATTGAGAAGCACTCCTTTCATGAATCTCTGTAACGTCCCAGGGGTTAAGGTACCTTTTGGGTTCCCGGATTCCTCCACGTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS CCA 90 bp CATCCCTGTGACGCTCTCAACTTCATTCTAAGGGTGCCAAGAGACTaGTTAGTCAAAGCCTCTAGAAGGGGATCCTCGTTGAAAGGAGCC +
Preference number: 5 (lower is better)
Translates to: HPCDALNFILRVPRD*LVKASRRGSSLKGA
Trigger: GGCTCCTTTCAACGAGGATCCCCTTCTAGAGGCTTTGACTAACCAGTCTCTTGGCACCCTTAGAATGAAGTTGAGAGCGTCACAGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571275.1
ENST00000633845.1
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACGCCATGGTGCCTTGTaGGTCCCAGATCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIRHGAL*VPDLQL
Trigger: CAGTTGGAGATCTGGGACCAACAAGGCACCATGGCG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACTGCGCCATGGTGCCTaGTTGGTCCCAGATCTCCAA +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSILRHGA*LVPDLQ
Trigger: TTGGAGATCTGGGACCAACAAGGCACCATGGCGCAG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACTGGTCCTCCCGATCTaGAAGCATGCTCCGGTAGGC +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRELVLPI*KHAPVG
Trigger: GCCTACCGGAGCATGCTTCAAGATCGGGAGGACCAG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCCTCCAGAATCGGGTTaGCTTGTAGAAGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNPPESG*LVEAAF
Trigger: AAAAGCAGCTTCTACAAGCAAACCCGATTCTGGAGG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGTCTTGTCCAGGGCTTaGTTCACGCGGGTGAGTATC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVVLSRA*FTRVSI
Trigger: GATACTCACCCGCGTGAACAAAGCCCTGGACAAGAC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCCTTGCCGATGGGTCTaGTCCAGGGCTTTGTTCACG +
Preference number: 5 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSPCRWV*SRALFT
Trigger: CGTGAACAAAGCCCTGGACAAGACCCATCGGCAAGG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTAGCGGGTCCATATTCTaGGTCAGCCAGGCACTCGCA +
Preference number: 5 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPSGSIF*VSQALA
Trigger: TGCGAGTGCCTGGCTGACCAAGAATATGGACCCGCT...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTAGGTCGGCCACAAACTaGTCGGAGGAGGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCRSATN*SEEALS
Trigger: GCTCAATGCCTCCTCCGACAAGTTTGTGGCCGACCT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAAGGTCGGCCACAAACTaGTCGGAGGAGGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIRSATN*SEEALS
Trigger: GCTCAATGCCTCCTCCGACAAGTTTGTGGCCGACCT...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGAGGTCGGCCACAAACTaGTCGGAGGAGGCATTGAGC +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTRSATN*SEEALS
Trigger: GCTCAATGCCTCCTCCGACAAGTTTGTGGCCGACCT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTAAGTTGGGCGTGGTGTaGCGTAGCGTGGTCATCAGC +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCKLGVV*RSVVIS
Trigger: GCTGATGACCACGCTACGCAACACCACGCCCAACTT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAGGAACGCATCCAGCTaGCCGGACCTCTTCTCGTGG +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRERNASS*PDLFSW
Trigger: CCACGAGAAGAGGTCCGGCAAGCTGGATGCGTTCCT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTAGGAACGCATCCAGCTaGCCGGACCTCTTCTCGTGG +
Preference number: 5 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFRNASS*PDLFSW
Trigger: CCACGAGAAGAGGTCCGGCAAGCTGGATGCGTTCCT...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCAGGATCTCGTAGCGTaGGCGGAACTCCTGGAAGAC +
Preference number: 5 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSQDLVA*AELLED
Trigger: GTCTTCCAGGAGTTCCGCCAACGCTACGAGATCCTG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTCTGCTGCCGCTCCTaGGTCTTCTGCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKFCCRS*VFCSSS
Trigger: GGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTTGTGGACTTTGTCATaGAGCTCCGCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVLWTLS*SSARAR
Trigger: GCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTTGTGGACTTTGTCATaGAGCTCCGCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGLWTLS*SSARAR
Trigger: GCGGGCCCGGGCGGAGCTCAATGACAAAGTCCACAA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCAGCTTCGTAGACACGTaGAGCTTCTGCCGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLSFVDT*SFCRVS
Trigger: AGAAACCCGGCAGAAGCTCAACGTGTCTACGAAGCT...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTGCTTCTTTTCCAGGTaGGACACGAGTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVCFFSR*DTSCRW
Trigger: CCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGCA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAACGCTCGAGTTCCTCTTaGGCTTCCAAGGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKRSSSS*ASKASS
Trigger: TGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGCG...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAGCTTTGAGCATTTTGTaGGTCCGCTCGAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAALSIL*VRSSSS
Trigger: AGAGGAACTCGAGCGGACCAACAAAATGCTCAAAGC...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp CTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAATCTTCCATTTCGGCTTaGAGCATTTTGTTGGTCCGC +
Preference number: 5 (lower is better)
Translates to: LALVPLKSASRVSVSSSESSISA*SILLVR
Trigger: GCGGACCAACAAAATGCTCAAAGCCGAAATGGAAGA...TTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp CTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTGGTCTTTCTTCCATTTCGGCTTaGAGCATTTTGTTGGTCCGC +
Preference number: 5 (lower is better)
Translates to: LFQLLKLILCLLLPLLGLSSISA*SILLVR
Trigger: GCGGACCAACAAAATGCTCAAAGCCGAAATGGAAGA...AAGACCAAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGCTCATGGACGTTCTaGCCCACGTCATCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSSWTF*PTSSLE
Trigger: CTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATTGAGCGCCTGCATGTaGACTTCCAGCCGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKLSACM*TSSRSL
Trigger: CAAACTGCGGCTGGAAGTCAACATGCAGGCGCTCAA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCTTTCGAACTGGCCCTaGAGCGCCTGCATGTTGACT +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVLSNWP*SACMLT
Trigger: AGTCAACATGCAGGCGCTCAAGGGCCAGTTCGAAAG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCAAGCTGTCTCTGCAGTaGCCTCCTCTTCTCCTCATT +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRKLSLQ*PPLLLI
Trigger: AATGAGGAGAAGAGGAGGCAACTGCAGAGACAGCTT...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTAGCTGCCAGGGCACGTaGCTTTCGCTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRSCQGT*LSLVFQ
Trigger: CTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGCT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCCTTCCAGCTTCTTCTTaGCTGCAGCTGCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSLPASS*LQLPGH
Trigger: GTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAG...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGCTTCCAGCTTCTTCTTaGCTGCAGCTGCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSLPASS*LQLPGH
Trigger: GTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAG...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTAGTTTGCGTAGCTGCTaGATGGCTTCCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSSLRSC*MASSLP
Trigger: GGGGAGGGAGGAAGCCATCAAGCAGCTACGCAAACT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTAGTTTGCGTAGCTGCTaGATGGCTTCCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSLRSC*MASSLP
Trigger: GGGGAGGGAGGAAGCCATCAAGCAGCTACGCAAACT...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACTTCTTCTCATTCTCTTaGGCTGTGGCAAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNFFSFS*AVAKIS
Trigger: TGAGATCTTTGCCACAGCCAAAGAGAATGAGAAGAA...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTTGCTCCGGAGCTCCTaGTTCTGCCGCTCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVLLRSS*FCRSSC
Trigger: GCAGCTCGAGCGGCAGAACAAGGAGCTCCGGAGCAA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTGCCTCTTGAGCTGCTaGACCCTGGCATTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVCLLSC*TLALPF
Trigger: GAAAGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCGCTTATTCACTGGCCTaGGTTCCATTGAAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRAYSLA*VPLKSA
Trigger: CGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGC...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGCAAAACTGTAGAAAGTaGCTTATTCACTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: VGAGGTHFGDFLPISCKQQNCRK*LIHWPW
Trigger: CCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTG...CTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACTGCTGGGTTTTGCTTaGTTCTGGGTTGTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSALLGFA*FWVVVG
Trigger: CCCAACAACAACCCAGAACAAAGCAAAACCCAGCAG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAACAGTCTGCTGGGTTTaGCTTTGTTCTGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRTVCWV*LCSGLL
Trigger: CAACAACCCAGAACAAAGCAAAACCCAGCAGACTGT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS TCA 90 bp CAGTTATCCAGGAAGGACAGCAACAGGGAACTTAGTAACGAAACTTaGCAAGTTAGGTCTGTTGCGGGAGGGCCAAGAGCTCCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: QLSRKDSNRELSNET*QVRSVAGGPRAPKA
Trigger: AGCTTTGGGAGCTCTTGGCCCTCCCGCAACAGACCTAACTTGTCAAGTTTCGTTACTAAGTTCCCTGTTGCTGTCCTTCCTGGATAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS CCA 90 bp ATGAAGTTTTTGTCCACAAAGAGGAACTTCTCATCGTCACTGAGTTaGCCCTTCTGCGCCATGGTGCCTTGTTGGTCCCAGATCTCCAAC +
Preference number: 5 (lower is better)
Translates to: MKFLSTKRNFSSSLS*PFCAMVPCWSQISN
Trigger: GTTGGAGATCTGGGACCAACAAGGCACCATGGCGCAGAAGGGCCAACTCAGTGACGATGAGAAGTTCCTCTTTGTGGACAAAAACTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000571505.1
ENST00000576790.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
ENST00000633799.1
ENST00000634050.1
ENST00000652121.1
CDS CCA 90 bp GCTCAGAGAGGTAGAGTAACTTGCCCAAGGTTCATCAGCAAAAACTaGGGCATCCACGATGAGAACCCAGGTCTAAAACTCGTTCCCTTC +
Preference number: 5 (lower is better)
Translates to: AQRGRVTCPRFISKN*GIHDENPGLKLVPF
Trigger: GAAGGGAACGAGTTTTAGACCTGGGTTCTCATCGTGGATGCCCCAGTTTTTGCTGATGAACCTTGGGCAAGTTACTCTACCTCTCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACGCCATGGTGCCTTGTaGGTCCCAGATCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRERHGAL*VPDLQL
Trigger: CAGTTGGAGATCTGGGACCAACAAGGCACCATGGCG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCTCATCGTCACTGAGTaGGCCCTTCTGCGCCATGGT +
Preference number: 5 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFLIVTE*ALLRHG
Trigger: ACCATGGCGCAGAAGGGCCAACTCAGTGACGATGAG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCTCATCGTCACTGAGTaGGCCCTTCTGCGCCATGGT +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVLIVTE*ALLRHG
Trigger: ACCATGGCGCAGAAGGGCCAACTCAGTGACGATGAG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTGTGTCTTTCTTGCCCTaGTGGGAGGAGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGVSFLP*WEEATT
Trigger: CGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGACAC...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCGTGTCTTTCTTGCCCTaGTGGGAGGAGGCCACCACG +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVVSFLP*WEEATT
Trigger: CGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGACAC...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCACCTCCAGAATCGGGTTaGCTTGTAGAAGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAPPESG*LVEAAF
Trigger: AAAAGCAGCTTCTACAAGCAAACCCGATTCTGGAGG...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCGCTCATATGTTGCCTaGGCCAAAGCCTCTACAGCA +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVRSYVA*AKASTA
Trigger: TGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGCG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGTCTTGTCCAGGGCTTaGTTCACGCGGGTGAGTATC +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCVLSRA*FTRVSI
Trigger: GATACTCACCCGCGTGAACAAAGCCCTGGACAAGAC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGGTCTTGTCCAGGGCTTaGTTCACGCGGGTGAGTATC +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTVLSRA*FTRVSI
Trigger: GATACTCACCCGCGTGAACAAAGCCCTGGACAAGAC...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCTTGTCCAGGGCTTaGTTCACGCGGGTGAGTATC +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSVLSRA*FTRVSI
Trigger: GATACTCACCCGCGTGAACAAAGCCCTGGACAAGAC...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAGCGGGTCCATATTCTaGGTCAGCCAGGCACTCGCA +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRESGSIF*VSQALA
Trigger: TGCGAGTGCCTGGCTGACCAAGAATATGGACCCGCT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTAGGAACGCATCCAGCTaGCCGGACCTCTTCTCGTGG +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGRNASS*PDLFSW
Trigger: CCACGAGAAGAGGTCCGGCAAGCTGGATGCGTTCCT...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCAGGATCTCGTAGCGTaGGCGGAACTCCTGGAAGAC +
Preference number: 5 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFQDLVA*AELLED
Trigger: GTCTTCCAGGAGTTCCGCCAACGCTACGAGATCCTG...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCCTATCCTGTATAAGTaGGGGTCAAGTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLPILYK*GSSSRA
Trigger: AGCCCTGGAACTTGACCCCAACTTATACAGGATAGG...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCTGCTGCCGCTCCTaGGTCTTCTGCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTFCCRS*VFCSSS
Trigger: GGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGAA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTCCAGCTCCTGCTTCTaGGCCGCCAGCCGCACCCGC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSSSCF*AASRTR
Trigger: GCGGGTGCGGCTGGCGGCCAAGAAGCAGGAGCTGGA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATCATCCTCCAGTTTCTaGATCTTGGCCTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSSSSF*ILASAV
Trigger: CACGGCTGAGGCCAAGATCAAGAAACTGGAGGATGA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAACTTCATTCTGCAGCTaGTGGACTTTGTCATTGAGC +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRTSFCS*WTLSLS
Trigger: GCTCAATGACAAAGTCCACAAGCTGCAGAATGAAGT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATACTTCATTCTGCAGCTaGTGGACTTTGTCATTGAGC +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNTSFCS*WTLSLS
Trigger: GCTCAATGACAAAGTCCACAAGCTGCAGAATGAAGT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCTGCCGGGTTTCTTCTaGAAGCAGCTCCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVLPGFF*KQLLGV
Trigger: GACACCCAGGAGCTGCTTCAAGAAGAAACCCGGCAG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAACGAGTTGCCGCTGGTaGTCCAAATCAACAACCAGG +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKTSCRW*SKSTTR
Trigger: CCTGGTTGTTGATTTGGACAACCAGCGGCAACTCGT...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCAGGTTGGACACGAGTaGCCGCTGGTTGTCCAAATC +
Preference number: 5 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPQVGHE*PLVVQI
Trigger: GATTTGGACAACCAGCGGCAACTCGTGTCCAACCTG...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGCAGGTTGGACACGAGTaGCCGCTGGTTGTCCAAATC +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTQVGHE*PLVVQI
Trigger: GATTTGGACAACCAGCGGCAACTCGTGTCCAACCTG...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATCGGCTTTGAGCATTTaGTTGGTCCGCTCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKSALSI*LVRSSS
Trigger: GGAACTCGAGCGGACCAACAAAATGCTCAAAGCCGA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTCGGCTTTGAGCATTTaGTTGGTCCGCTCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSALSI*LVRSSS
Trigger: GGAACTCGAGCGGACCAACAAAATGCTCAAAGCCGA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTCTTCCATTTCGGCTTaGAGCATTTTGTTGGTCCGC +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRSSISA*SILLVR
Trigger: GCGGACCAACAAAATGCTCAAAGCCGAAATGGAAGA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGCTCATGGACGTTCTaGCCCACGTCATCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSSSWTF*PTSSLE
Trigger: CTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCT...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCCTTCTCGAGGTCCGCTaGTTTGCGAGCCCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVLLEVR*FASPLS
Trigger: GCTGAGAGGGCTCGCAAACAAGCGGACCTCGAGAAG...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCCATCTCGTGGAGCTaGCTCCGGAGCTCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSISWS*LRSSLF
Trigger: GAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGGA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCTGCTTCAGCGACTaGGTGGCCGCCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTFCFSD*VAACFS
Trigger: AGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGAA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATATTTCCTTCAGCTTCTaGTCTTTCTGCTTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNISFSF*SFCFSD
Trigger: GTCGCTGAAGCAGAAAGACAAGAAGCTGAAGGAAAT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTGCTTCTGTTCCAGCTCCTTAAGCTCATTCTCTGCCTTCTGCTGCCGCTCCTTATTTCCTTCAGCTTCTaGTCTTTCTGCTTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: VLLFQLLKLILCLLLPLLISFSF*SFCFSD
Trigger: GTCGCTGAAGCAGAAAGACAAGAAGCTGAAGGAAAT...AAGGAGCGGCAGCAGAAGGCAGAGAATGAGCTTAAGGAGCTGGAACAGAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTTGCCTCTTGAGCTGCTaGACCCTGGCATTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSCLLSC*TLALPF
Trigger: GAAAGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCA...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GAGTGGGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACACTTCAATTTTTACCTaGAATACAGGGGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: EWGPAAPISVTFSPFHVNTSIFT*NTGVVG
Trigger: CCCTACTACCCCTGTATTCAAGGTAAAAATTGAAGT...GTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCCCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGATGTCTGCACAATCCATaGATAGAACTGGAGGATGTG +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRCLHNP*IELEDV
Trigger: CACATCCTCCAGTTCTATCAATGGATTGTGCAGACA...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS GCA 90 bp GGAGGAAGAGAAGGATGGGCCCTAGAGGTGATGACTCTAGAAACCTaGTCTTCTTTTCCTCCCAAGCTCTTAGTCATACCGTGTCATCAT +
Preference number: 5 (lower is better)
Translates to: GGREGWALEVMTLET*SSFPPKLLVIPCHH
Trigger: ATGATGACACGGTATGACTAAGAGCTTGGGAGGAAAAGAAGAGCAGGTTTCTAGAGTCATCACCTCTAGGGCCCATCCTTCTCTTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS CCA 90 bp GATTATAGGTGTGAGTCCCGTGCCCAGCCAAGCTTGAGTTTCATTTaGGTTGTGCTTTCACCAAATGATTGCAGCAATGCAAGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: DYRCESRAQPSLSFI*VVLSPNDCSNARGG
Trigger: TCCCCCTCTTGCATTGCTGCAATCATTTGGTGAAAGCACAACCCAAATGAAACTCAAGCTTGGCTGGGCACGGGACTCACACCTATAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCCTGCGCCATGGTGCCTaGTTGGTCCCAGATCTCCAA +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVLRHGA*LVPDLQ
Trigger: TTGGAGATCTGGGACCAACAAGGCACCATGGCGCAG...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGATACTTGTGTCTTTCTaGCCCTTGTGGGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSILVSF*PLWEEA
Trigger: GGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTAT...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTATACTTGTGTCTTTCTaGCCCTTGTGGGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSILVSF*PLWEEA
Trigger: GGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTAT...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTTCACTGTTTTGGCGTaGCCGAAAGCCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVFTVLA*PKASRI
Trigger: GATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGAA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTACATCTCGCCCAACCTaGATACGAGGAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPTSRPT*IRGVRM
Trigger: CATCCTCACTCCTCGTATCAAGGTTGGGCGAGATGT...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGTCTTGTCCAGGGCTTaGTTCACGCGGGTGAGTATC +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREVLSRA*FTRVSI
Trigger: GATACTCACCCGCGTGAACAAAGCCCTGGACAAGAC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCCCTTGCCGATGGGTCTaGTCCAGGGCTTTGTTCACG +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVPCRWV*SRALFT
Trigger: CGTGAACAAAGCCCTGGACAAGACCCATCGGCAAGG...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTAAGTTGGGCGTGGTGTaGCGTAGCGTGGTCATCAGC +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGKLGVV*RSVVIS
Trigger: GCTGATGACCACGCTACGCAACACCACGCCCAACTT...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTTCAAGTTCCAGGGCTTaGATCATGAGAATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVSSSRA*IMRMQA
Trigger: GGCCTGCATTCTCATGATCAAAGCCCTGGAACTTGA...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTCCTATCCTGTATAAGTaGGGGTCAAGTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVPILYK*GSSSRA
Trigger: AGCCCTGGAACTTGACCCCAACTTATACAGGATAGG...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCAGTTTCTTGATCTaGGCCTCAGCCGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTSSFLI*ASAVTF
Trigger: GAAGGTCACGGCTGAGGCCAAGATCAAGAAACTGGA...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATATCCAGTTTCTTGATCTaGGCCTCAGCCGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSISSFLI*ASAVTF
Trigger: GAAGGTCACGGCTGAGGCCAAGATCAAGAAACTGGA...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCCTGCTCCCCTCCGTGGGAGCAGCGTCTCCTTTTCAATTCATGTGACTACAGAAGCTTGGTAAGATTCTaGGCCTTTTCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SCSPPWEQRLLFNSCDYRSLVRF*AFSSSS
Trigger: AGAAGAGGAAGAAAAGGCCAAGAATCTTACCAAGCT...TCTGTAGTCACATGAATTGAAAAGGAGACGCTGCTCCCACGGAGGGGAGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTTCTGCTTTTCAGCCTaGTTCCTGGCGGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVFCFSA*FLAARS
Trigger: AGAGCGGGCCGCCAGGAACAAGGCTGAAAAGCAGAA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCTTCGCCTTGGCCCTCTaGAACTGCTCAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFFALAL*NCSSCS
Trigger: AGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGAA...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTGTTCCACCTCCTGCTaGGCCTGGCCCAGGACCCGC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDCSTSC*AWPRTR
Trigger: GCGGGTCCTGGGCCAGGCCAAGCAGGAGGTGGAACA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTGCAGCTTGTGGACTTaGTCATTGAGCTCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVCSLWT*SLSSAR
Trigger: CCGGGCGGAGCTCAATGACAAAGTCCACAAGCTGCA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTGCTTCTTTTCCAGGTaGGACACGAGTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVCFFSR*DTSCRW
Trigger: CCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGCA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACGCTCGAGTTCCTCTTaGGCTTCCAAGGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRERSSSS*ASKASS
Trigger: TGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGCG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCCGCTCGAGTTCCTCTTaGGCTTCCAAGGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVRSSSS*ASKASS
Trigger: TGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGCG...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTTCGGCTTTGAGCATTTaGTTGGTCCGCTCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCSALSI*LVRSSS
Trigger: GGAACTCGAGCGGACCAACAAAATGCTCAAAGCCGA...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAGCTCATGGACGTTCTaGCCCACGTCATCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRESSWTF*PTSSLE
Trigger: CTCCAAGGATGACGTGGGCAAGAACGTCCATGAGCT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATTGAGCGCCTGCATGTaGACTTCCAGCCGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRELSACM*TSSRSL
Trigger: CAAACTGCGGCTGGAAGTCAACATGCAGGCGCTCAA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTTGAGCGCCTGCATGTaGACTTCCAGCCGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVLSACM*TSSRSL
Trigger: CAAACTGCGGCTGGAAGTCAACATGCAGGCGCTCAA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAAGCTGTCTCTGCAGTaGCCTCCTCTTCTCCTCATT +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVKLSLQ*PPLLLI
Trigger: AATGAGGAGAAGAGGAGGCAACTGCAGAGACAGCTT...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCCTTCCAGCTTCTTCTTaGCTGCAGCTGCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVLPASS*LQLPGH
Trigger: GTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAG...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTCCATCTCGTGGAGCTaGCTCCGGAGCTCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGSISWS*LRSSLF
Trigger: GAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGGA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTTCTGCTTCAGCGACTaGGTGGCCGCCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRFCFSD*VAACFS
Trigger: AGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGAA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTTCTGCTTCAGCGACTaGGTGGCCGCCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVFCFSD*VAACFS
Trigger: AGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGAA...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCAATTTCCTTCAGCTTCTaGTCTTTCTGCTTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: VPLKSASRVSVSSSEPSAISFSF*SFCFSD
Trigger: GTCGCTGAAGCAGAAAGACAAGAAGCTGAAGGAAAT...TGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTTCAATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAATGCCTCTTGAGCTGCTaGACCCTGGCATTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRECLLSC*TLALPF
Trigger: GAAAGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCA...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTGCCTCTTGAGCTGCTaGACCCTGGCATTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFCLLSC*TLALPF
Trigger: GAAAGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCGGCCCATGGCCTCGTaGCTCTCCGTGGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDRPMAS*LSVASS
Trigger: GGATGAGGCCACGGAGAGCAACGAGGCCATGGGCCG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCGGCCCATGGCCTCGTaGCTCTCCGTGGCCTCATCC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDRPMAS*LSVASS
Trigger: GGATGAGGCCACGGAGAGCAACGAGGCCATGGGCCG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATCAAAACTGTAGAAAGTaGCTTATTCACTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNQNCRK*LIHWPW
Trigger: CCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTG...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTGTCTGCACAATCCATaGATAGAACTGGAGGATGTG +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRCLHNP*IELEDV
Trigger: CACATCCTCCAGTTCTATCAATGGATTGTGCAGACA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS TCA 90 bp AATCCTCTTAGCGGACTGCGGAATAAAGCTTCAAAGCAGGTTGCCTaGGCTCCATTCATTGGGTTAAAGGAAGCTGAGACTGTACACAGC +
Preference number: 5 (lower is better)
Translates to: NPLSGLRNKASKQVA*APFIGLKEAETVHS
Trigger: GCTGTGTACAGTCTCAGCTTCCTTTAACCCAATGAATGGAGCTCAGGCAACCTGCTTTGAAGCTTTATTCCGCAGTCCGCTAAGAGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS GCA 90 bp CAAGTAAGGAATGCACAAAACCCACCAGGAATCCTCTTAGCGGACTaGGGAATAAAGCTTCAAAGCAGGTTGCCTGAGCTCCATTCATTG +
Preference number: 5 (lower is better)
Translates to: QVRNAQNPPGILLAD*GIKLQSRLPELHSL
Trigger: CAATGAATGGAGCTCAGGCAACCTGCTTTGAAGCTTTATTCCGCAGTCCGCTAAGAGGATTCCTGGTGGGTTTTGTGCATTCCTTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATACCCAGACGAGTCTCTaGGCGGCCCAGTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDTQTSL*AAQSAW
Trigger: CCAGGCTGACTGGGCCGCCAAGAGACTCGTCTGGGT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAGCACGGAGGCTTCGTaGAGGCACGTCAGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSTEAS*RHVSSA
Trigger: GGCGGAGCTGACGTGCCTCAACGAAGCCTCCGTGCT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGAGCACGGAGGCTTCGTaGAGGCACGTCAGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSTEAS*RHVSSA
Trigger: GGCGGAGCTGACGTGCCTCAACGAAGCCTCCGTGCT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTATACTTGTGTCTTTCTaGCCCTTGTGGGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRILVSF*PLWEEA
Trigger: GGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTAT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATATTCACTGTTTTGGCGTaGCCGAAAGCCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIFTVLA*PKASRI
Trigger: GATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGAA...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTCTCTGGCTTGGCGAATaGCCCGTGATTTTTCTAGCA +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCLWLGE*PVIFLA
Trigger: TGCTAGAAAAATCACGGGCAATTCGCCAAGCCAGAG...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCTCTGGCTTGGCGAATaGCCCGTGATTTTTCTAGCA +
Preference number: 5 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPLWLGE*PVIFLA
Trigger: TGCTAGAAAAATCACGGGCAATTCGCCAAGCCAGAG...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AATGGCCTTCCCCTCGGCCTCGTTAAGCATCCCTGTGACGCTCTCAACTTCATTGTGTTTCTTTCCTTCTaGAAGACGATATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: NGLPLGLVKHPCDALNFIVFLSF*KTIFPS
Trigger: GCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACAC...AATGAAGTTGAGAGCGTCACAGGGATGCTTAACGAGGCCGAGGGGAAGGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS-3UTR CAA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCACATCTCGCCCAACCTaGATACGAGGAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFTSRPT*IRGVRM
Trigger: CATCCTCACTCCTCGTATCAAGGTTGGGCGAGATGT...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCGCTCATATGTTGCCTaGGCCAAAGCCTCTACAGCA +
Preference number: 5 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFRSYVA*AKASTA
Trigger: TGCTGTAGAGGCTTTGGCCAAGGCAACATATGAGCG...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTAGCAGGGAAGTCACGTaGTCATTCAGCGGGTCCATA +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRSREVT*SFSGSI
Trigger: TATGGACCCGCTGAATGACAACGTGACTTCCCTGCT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTTCAAGTTCCAGGGCTTaGATCATGAGAATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSSSSRA*IMRMQA
Trigger: GGCCTGCATTCTCATGATCAAAGCCCTGGAACTTGA...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTCCTATCCTGTATAAGTaGGGGTCAAGTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSPILYK*GSSSRA
Trigger: AGCCCTGGAACTTGACCCCAACTTATACAGGATAGG...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCATCCTCCAGTTTCTaGATCTTGGCCTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRSSSSF*ILASAV
Trigger: CACGGCTGAGGCCAAGATCAAGAAACTGGAGGATGA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTTCGCCTTGGCCCTCTaGAACTGCTCAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVFALAL*NCSSCS
Trigger: AGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGAA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCAGCTTCGTAGACACGTaGAGCTTCTGCCGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFSFVDT*SFCRVS
Trigger: AGAAACCCGGCAGAAGCTCAACGTGTCTACGAAGCT...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCAGGTTGGACACGAGTaGCCGCTGGTTGTCCAAATC +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGQVGHE*PLVVQI
Trigger: GATTTGGACAACCAGCGGCAACTCGTGTCCAACCTG...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTGCTTCTTTTCCAGGTaGGACACGAGTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVCFFSR*DTSCRW
Trigger: CCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGCA...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTTGCTTCTTTTCCAGGTaGGACACGAGTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGCFFSR*DTSCRW
Trigger: CCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGCA...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCGCTCGAGTTCCTCTTaGGCTTCCAAGGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGRSSSS*ASKASS
Trigger: TGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGCG...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCCGCTCGAGTTCCTCTTaGGCTTCCAAGGCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVRSSSS*ASKASS
Trigger: TGAAGAGGCCTTGGAAGCCAAAGAGGAACTCGAGCG...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp ACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGGCTTTGAGCATTTTGTaGGTCCGCTCGAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: TVESCLFTGLGSIEVCVSALSIL*VRSSSS
Trigger: AGAGGAACTCGAGCGGACCAACAAAATGCTCAAAGC...CGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCGCTTTGAGCATTTTGTaGGTCCGCTCGAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSALSIL*VRSSSS
Trigger: AGAGGAACTCGAGCGGACCAACAAAATGCTCAAAGC...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTTCGGCTTTGAGCATTTaGTTGGTCCGCTCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRSALSI*LVRSSS
Trigger: GGAACTCGAGCGGACCAACAAAATGCTCAAAGCCGA...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCATCTTCCAGCTCTCTTaGAAAGTCCTTCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLIFQLS*KVLHLS
Trigger: GCTCAGATGAAGGACTTTCAAAGAGAGCTGGAAGAT...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp ACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTCCTCGCTTCTTCTCATTCTCTTaGGCTGTGGCAAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: TLRPPDLLEGTKEVSFPRFFSFS*AVAKIS
Trigger: TGAGATCTTTGCCACAGCCAAAGAGAATGAGAAGAA...GCGAGGAAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTCGAGGTCCGCTTGTTaGCGAGCCCTCTCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDSRSAC*RALSAA
Trigger: CGCCGCTGAGAGGGCTCGCAAACAAGCGGACCTCGA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGCCTGCTGTGTGGCTTaGCGGACCCGGTCGCTCATG +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDACCVA*RTRSLM
Trigger: CATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGCCTGCTGTGTGGCTTaGCGGACCCGGTCGCTCATG +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLACCVA*RTRSLM
Trigger: CATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTCTGTGGCCAGCTCGTaGCTGAGCTGCTCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSVASS*LSCSAC
Trigger: GCAGGCCGAGCAGCTCAGCAACGAGCTGGCCACAGA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTCTGTGGCCAGCTCGTaGCTGAGCTGCTCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSVASS*LSCSAC
Trigger: GCAGGCCGAGCAGCTCAGCAACGAGCTGGCCACAGA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTGCTTATTCACTGGCCTaGGTTCCATTGAAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPAYSLA*VPLKSA
Trigger: CGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGC...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAGCTTATTCACTGGCCTaGGTTCCATTGAAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIAYSLA*VPLKSA
Trigger: CGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGC...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGCTGCTGGGTTTTGCTTaGTTCTGGGTTGTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTLLGFA*FWVVVG
Trigger: CCCAACAACAACCCAGAACAAAGCAAAACCCAGCAG...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GGGGCCGGCGGCACCCATTTCGGTGACTTTCTCCCCATTTCATGTAAACAGAATACTTCAATTTTTACCTaGAATACAGGGGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: GAGGTHFGDFLPISCKQNTSIFT*NTGVVG
Trigger: CCCTACTACCCCTGTATTCAAGGTAAAAATTGAAGT...ATTCTGTTTACATGAAATGGGGAGAAAGTCACCGAAATGGGTGCCGCCGGCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTGACTACAGAAGGCACTaGGTGAACTGTGCGTGTCTG +
Preference number: 5 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFDYRRH*VNCACL
Trigger: CAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTC...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTATACTTGTGTCTTTCTaGCCCTTGTGGGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGILVSF*PLWEEA
Trigger: GGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTAT...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATACCTCCAGAATCGGGTTaGCTTGTAGAAGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSIPPESG*LVEAAF
Trigger: AAAAGCAGCTTCTACAAGCAAACCCGATTCTGGAGG...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCAGCAGGGAAGTCACGTaGTCATTCAGCGGGTCCATA +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVSREVT*SFSGSI
Trigger: TATGGACCCGCTGAATGACAACGTGACTTCCCTGCT...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGAGCTCTCCGTCATCTaGGCCATCTGGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLELSVI*AIWSRP
Trigger: GGGCCTGGACCAGATGGCCAAGATGACGGAGAGCTC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATATGCCCTTCTTGGTCTaGGAGGCGCTGGGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDMPFLV*EALGSE
Trigger: CTCGCTGCCCAGCGCCTCCAAGACCAAGAAGGGCAT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCTCAAGTTCCAGGGCTTaGATCATGAGAATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFSSSRA*IMRMQA
Trigger: GGCCTGCATTCTCATGATCAAAGCCCTGGAACTTGA...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTGTTCGGAAGAAGATTTaGCTCTGCCCTATCCTGTAT +
Preference number: 5 (lower is better)
Translates to: GGKNSQRPDVRSWKGLQVVRKKI*LCPILY
Trigger: ATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAAC...AACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTCCCCATCGCTGCACTaGGACTGCAGCTCCTGCACC +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDSPSLH*DCSSCT
Trigger: GGTGCAGGAGCTGCAGTCCAAGTGCAGCGATGGGGA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCTCGTCCAGCTGGTCTaGCAGGCTGTTCCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLVQLV*QAVPLL
Trigger: GAGGAGCGGAACAGCCTGCAAGACCAGCTGGACGAG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCGCTCCAGGTTCTGCTaGGCCTCCATCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDRSRFC*ASISSS
Trigger: GGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGCG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCGCTCCAGGTTCTGCTaGGCCTCCATCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLRSRFC*ASISSS
Trigger: GGACGAGGAGATGGAGGCCAAGCAGAACCTGGAGCG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGCCAGGGACAGGGCCTaGGTTTCCTTCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDARDRA*VSFSLA
Trigger: AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGCCAGGGACAGGGCCTaGGTTTCCTTCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDARDRA*VSFSLA
Trigger: AGCCAGGGAGAAGGAAACCAAGGCCCTGTCCCTGGC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATATCTTCCATTTCGGCTTaGAGCATTTTGTTGGTCCGC +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSISSISA*SILLVR
Trigger: GCGGACCAACAAAATGCTCAAAGCCGAAATGGAAGA...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGACTTCCAGCCGCAGTTaGGCGTCCTCCGTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLTSSRS*ASSVAC
Trigger: GCAAGCCACGGAGGACGCCAAACTGCGGCTGGAAGT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAAGCTGTCTCTGCAGTaGCCTCCTCTTCTCCTCATT +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREKLSLQ*PPLLLI
Trigger: AATGAGGAGAAGAGGAGGCAACTGCAGAGACAGCTT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCTTCTTCTCATTCTCTTaGGCTGTGGCAAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLFFSFS*AVAKIS
Trigger: TGAGATCTTTGCCACAGCCAAAGAGAATGAGAAGAA...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTGCTCCGGAGCTCCTaGTTCTGCCGCTCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLLRSS*FCRSSC
Trigger: GCAGCTCGAGCGGCAGAACAAGGAGCTCCGGAGCAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTGCAGCTTCCTGCGGTaGGCGTTGATGCGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDCSFLR*ALMRWD
Trigger: GTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTGCAGCTTCCTGCGGTaGGCGTTGATGCGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLCSFLR*ALMRWD
Trigger: GTCCCAGCGCATCAACGCCAACCGCAGGAAGCTGCA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCGCCTGAGCTTGCTCTaGAGTGCGTTCACCTCGCGG +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDRLSLL*SAFTSR
Trigger: CCGCGAGGTGAACGCACTCAAGAGCAAGCTCAGGCG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGCTTATTCACTGGCCTaGGTTCCATTGAAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREAYSLA*VPLKSA
Trigger: CGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTGTCCGTTTCCTCCAAAACTGTAGAAAGTaGCTTATTCACTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: LFTGLGSIEVCVSSVRFLQNCRK*LIHWPW
Trigger: CCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTG...GAGGAAACGGACACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp GAAACCAGGAGAGGGGGAAAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAATGTCTGCACAATCCATaGATAGAACTGGAGGATGTG +
Preference number: 5 (lower is better)
Translates to: ETRRGGKNSQRPDVRSWKCLHNP*IELEDV
Trigger: CACATCCTCCAGTTCTATCAATGGATTGTGCAGACA...TTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTTTCCCCCTCTCCTGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTACCGCTCCCTCAGGTaGTGTAGCACGGAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLYRSLR*CSTEAS
Trigger: CGAAGCCTCCGTGCTACACAACCTGAGGGAGCGGTA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCTGGTCCTCCCGATCTaGAAGCATGCTCCGGTAGGC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLVLPI*KHAPVG
Trigger: GCCTACCGGAGCATGCTTCAAGATCGGGAGGACCAG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCAGGAAGGAAGCCCCTaGCCGATGGGTCTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDQEGSP*PMGLVQ
Trigger: CTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCTG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATAGCACACCTGGAGGGTaGTTCGGTCGCTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDSTPGG*FGRSMS
Trigger: GCTCATCGAGCGACCGAACAACCCTCCAGGTGTGCT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATAGGAACGCATCCAGCTaGCCGGACCTCTTCTCGTGG +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDRNASS*PDLFSW
Trigger: CCACGAGAAGAGGTCCGGCAAGCTGGATGCGTTCCT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCCCTATCCTGTATAAGTaGGGGTCAAGTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVPILYK*GSSSRA
Trigger: AGCCCTGGAACTTGACCCCAACTTATACAGGATAGG...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp CGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTGTTCGGAAGAAGATTTaGCTCTGCCCTATCCTGTAT +
Preference number: 5 (lower is better)
Translates to: RVSVSSSEPSAFSITLRPVRKKI*LCPILY
Trigger: ATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAAC...AGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATAGGGACGCCACGTCCTaGGCCAGCTTAATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDRDATS*ASLMAF
Trigger: GAAGGCCATTAAGCTGGCCAAGGACGTGGCGTCCCT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCTGCTCGTCCCGGGCTaGGAGATCCCTTTCGAACTG +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLLVPG*EIPFEL
Trigger: CAGTTCGAAAGGGATCTCCAAGCCCGGGACGAGCAG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTAAGCTGTCTCTGCAGTaGCCTCCTCTTCTCCTCATT +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGKLSLQ*PPLLLI
Trigger: AATGAGGAGAAGAGGAGGCAACTGCAGAGACAGCTT...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAGCTGCCAGGGCACGTaGCTTTCGCTCGTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSCQGT*LSLVFQ
Trigger: CTGGAAGACGAGCGAAAGCAACGTGCCCTGGCAGCT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCCTCCATCTTCCAGCTCTCTTaGAAAGTCCTTCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: SVRFLLRTICIFNNSTSSIFQLS*KVLHLS
Trigger: GCTCAGATGAAGGACTTTCAAAGAGAGCTGGAAGAT...GGAGGACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGATCTTCCAGCTCTCTTaGAAAGTCCTTCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTIFQLS*KVLHLS
Trigger: GCTCAGATGAAGGACTTTCAAAGAGAGCTGGAAGAT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGCCGCGATGGTGGACTaGAACTTGGACTTGACGGCC +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDAAMVD*NLDLTA
Trigger: GGCCGTCAAGTCCAAGTTCAAGTCCACCATCGCGGC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGCCGCGATGGTGGACTaGAACTTGGACTTGACGGCC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLAAMVD*NLDLTA
Trigger: GGCCGTCAAGTCCAAGTTCAAGTCCACCATCGCGGC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGATTTCCTTCAGCTTCTaGTCTTTCTGCTTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: VSSVRFLLRTICIFNNSTISFSF*SFCFSD
Trigger: GTCGCTGAAGCAGAAAGACAAGAAGCTGAAGGAAAT...CGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTGCTGGGTTTTGCTTaGTTCTGGGTTGTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGLLGFA*FWVVVG
Trigger: CCCAACAACAACCCAGAACAAAGCAAAACCCAGCAG...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTACAGTCTGCTGGGTTTaGCTTTGTTCTGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRTVCWV*LCSGLL
Trigger: CAACAACCCAGAACAAAGCAAAACCCAGCAGACTGT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS TCA 90 bp TGGCCTCTTAGAATCAGGGAATCAGAACAGAAAGGCCCCTGTTTGTaGTTCGCGTTTGAGGTATTAGGATGCAGGAAAGCATCTTTACTT +
Preference number: 5 (lower is better)
Translates to: WPLRIRESEQKGPCL*FAFEVLGCRKASLL
Trigger: AAGTAAAGATGCTTTCCTGCATCCTAATACCTCAAACGCGAATCACAAACAGGGGCCTTTCTGTTCTGATTCCCTGATTCTAAGAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS CCA 90 bp TCATTGGGAGGAGATGAAGAACTGTTCATATGTCACTCACAGACATaGTCCTTTCTGGCAGGATCTGAGACTGTTTTAATAGCCAATCCC +
Preference number: 5 (lower is better)
Translates to: SLGGDEELFICHSQT*SFLAGSETVLIANP
Trigger: GGGATTGGCTATTAAAACAGTCTCAGATCCTGCCAGAAAGGACCATGTCTGTGAGTGACATATGAACAGTTCTTCATCTCCTCCCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571910.2
ENST00000631759.1
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCGCCATGGTGCCTTGTaGGTCCCAGATCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDRHGAL*VPDLQL
Trigger: CAGTTGGAGATCTGGGACCAACAAGGCACCATGGCG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCTGCGCCATGGTGCCTaGTTGGTCCCAGATCTCCAA +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLRHGA*LVPDLQ
Trigger: TTGGAGATCTGGGACCAACAAGGCACCATGGCGCAG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCTCATCGTCACTGAGTaGGCCCTTCTGCGCCATGGT +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLIVTE*ALLRHG
Trigger: ACCATGGCGCAGAAGGGCCAACTCAGTGACGATGAG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCCTTGCCGATGGGTCTaGTCCAGGGCTTTGTTCACG +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDPCRWV*SRALFT
Trigger: CGTGAACAAAGCCCTGGACAAGACCCATCGGCAAGG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAGCGGGTCCATATTCTaGGTCAGCCAGGCACTCGCA +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSGSIF*VSQALA
Trigger: TGCGAGTGCCTGGCTGACCAAGAATATGGACCCGCT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCAGGATCTCGTAGCGTaGGCGGAACTCCTGGAAGAC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDQDLVA*AELLED
Trigger: GTCTTCCAGGAGTTCCGCCAACGCTACGAGATCCTG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCAGGATCTCGTAGCGTaGGCGGAACTCCTGGAAGAC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLQDLVA*AELLED
Trigger: GTCTTCCAGGAGTTCCGCCAACGCTACGAGATCCTG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTCTTGCCGTGGTGCAAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCGTTCGGAAGAAGATTTaGCTCTGCCCTATCCTGTAT +
Preference number: 5 (lower is better)
Translates to: FLAVVQNCRKLLIHWPWFVRKKI*LCPILY
Trigger: ATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAAC...GAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTGCACCACGGCAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp AAGTCTGCGTCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAAGCTTGGTAAGATTCTaGGCCTTTTCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: KSASRVSVSSSEPSAFSISLVRF*AFSSSS
Trigger: AGAAGAGGAAGAAAAGGCCAAGAATCTTACCAAGCT...TATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGACGCAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTCTGCTTTTCAGCCTaGTTCCTGGCGGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDFCFSA*FLAARS
Trigger: AGAGCGGGCCGCCAGGAACAAGGCTGAAAAGCAGAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTGCAGCTTGTGGACTTaGTCATTGAGCTCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDCSLWT*SLSSAR
Trigger: CCGGGCGGAGCTCAATGACAAAGTCCACAAGCTGCA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTGCAGCTTGTGGACTTaGTCATTGAGCTCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDCSLWT*SLSSAR
Trigger: CCGGGCGGAGCTCAATGACAAAGTCCACAAGCTGCA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTACTTCATTCTGCAGCTaGTGGACTTTGTCATTGAGC +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRTSFCS*WTLSLS
Trigger: GCTCAATGACAAAGTCCACAAGCTGCAGAATGAAGT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCTTCCAGCTTCTTCTTaGCTGCAGCTGCCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLPASS*LQLPGH
Trigger: GTGCCCTGGCAGCTGCAGCAAAGAAGAAGCTGGAAG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGAGTTTGCGTAGCTGCTaGATGGCTTCCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSLRSC*MASSLP
Trigger: GGGGAGGGAGGAAGCCATCAAGCAGCTACGCAAACT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAGTTTGCGTAGCTGCTaGATGGCTTCCTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSLRSC*MASSLP
Trigger: GGGGAGGGAGGAAGCCATCAAGCAGCTACGCAAACT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAATCTTCCAGCTCTCTTaGAAAGTCCTTCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREIFQLS*KVLHLS
Trigger: GCTCAGATGAAGGACTTTCAAAGAGAGCTGGAAGAT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCATCTTCCAGCTCTCTTaGAAAGTCCTTCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVIFQLS*KVLHLS
Trigger: GCTCAGATGAAGGACTTTCAAAGAGAGCTGGAAGAT...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp GTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCTCGAGTTTCTTCTCATTCTCTTaGGCTGTGGCAAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: VESCLFTGLGSIEVCVSSFFSFS*AVAKIS
Trigger: TGAGATCTTTGCCACAGCCAAAGAGAATGAGAAGAA...ACTCGAGACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTCCATCTCGTGGAGCTaGCTCCGGAGCTCCTTGTTC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSISWS*LRSSLF
Trigger: GAACAAGGAGCTCCGGAGCAAGCTCCACGAGATGGA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAATTTCCTTCAGCTTCTaGTCTTTCTGCTTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREISFSF*SFCFSD
Trigger: GTCGCTGAAGCAGAAAGACAAGAAGCTGAAGGAAAT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCATTTCCTTCAGCTTCTaGTCTTTCTGCTTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVISFSF*SFCFSD
Trigger: GTCGCTGAAGCAGAAAGACAAGAAGCTGAAGGAAAT...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTACAGTCTGCTGGGTTTaGCTTTGTTCTGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGTVCWV*LCSGLL
Trigger: CAACAACCCAGAACAAAGCAAAACCCAGCAGACTGT...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TTCAATTCATGTGACTACAGAAGGCACTTGGTGAACTGTGCGTGTCTGAGGTGTGTGTTTCTTTCCTTCTaGAAGACGATATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: FNSCDYRRHLVNCACLRCVFLSF*KTIFPS
Trigger: GCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACAC...ACACCTCAGACACGCACAGTTCACCAAGTGCCTTCTGTAGTCACATGAATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGTCTTGTCCAGGGCTTaGTTCACGCGGGTGAGTATC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDVLSRA*FTRVSI
Trigger: GATACTCACCCGCGTGAACAAAGCCCTGGACAAGAC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTCTGCTGCCGCTCCTaGGTCTTCTGCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLFCCRS*VFCSSS
Trigger: GGATGAACTGCAGAAGACCAAGGAGCGGCAGCAGAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp GCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCAGCTTGGTAAGATTCTaGGCCTTTTCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: AFSITLRPPDLLEGTKEVSLVRF*AFSSSS
Trigger: AGAAGAGGAAGAAAAGGCCAAGAATCTTACCAAGCT...GACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAAGCTTGGTAAGATTCTaGGCCTTTTCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVRESLVRF*AFSSSS
Trigger: AGAAGAGGAAGAAAAGGCCAAGAATCTTACCAAGCT...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTCGCCTTGGCCCTCTaGAACTGCTCAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLFALAL*NCSSCS
Trigger: AGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTCGCCTTGGCCCTCTaGAACTGCTCAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDFALAL*NCSSCS
Trigger: AGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTTCGCCTTGGCCCTCTaGAACTGCTCAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDFALAL*NCSSCS
Trigger: AGAGCAGCTTGAGCAGTTCAAGAGGGCCAAGGCGAA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAAACTGTAGAAAGTTGCTTATTCACTGGCCTTGGTTCCATTGAAGTCTGCGTCACTTCATTCTGCAGCTaGTGGACTTTGTCATTGAGC +
Preference number: 5 (lower is better)
Translates to: KTVESCLFTGLGSIEVCVTSFCS*WTLSLS
Trigger: GCTCAATGACAAAGTCCACAAGCTGCAGAATGAAGT...GACGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTGCTTCTTTTCCAGGTaGGACACGAGTTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLCFFSR*DTSCRW
Trigger: CCAGCGGCAACTCGTGTCCAACCTGGAAAAGAAGCA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTGAGCGCCTGCATGTaGACTTCCAGCCGCAGTTTG +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLLSACM*TSSRSL
Trigger: CAAACTGCGGCTGGAAGTCAACATGCAGGCGCTCAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCTTTCGAACTGGCCCTaGAGCGCCTGCATGTTGACT +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDLSNWP*SACMLT
Trigger: AGTCAACATGCAGGCGCTCAAGGGCCAGTTCGAAAG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTCTCGTTTTTCTTCTCATTCTCTTaGGCTGTGGCAAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: SITLRPPDLLEGTKEVSFFFSFS*AVAKIS
Trigger: TGAGATCTTTGCCACAGCCAAAGAGAATGAGAAGAA...AAACGAGACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTCTGCTTCAGCGACTaGGTGGCCGCCTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLFCFSD*VAACFS
Trigger: AGAGAAACAGGCGGCCACCAAGTCGCTGAAGCAGAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTGCCTCTTGAGCTGCTaGACCCTGGCATTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLCLLSC*TLALPF
Trigger: GAAAGGCAATGCCAGGGTCAAGCAGCTCAAGAGGCA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAACAAAACTGTAGAAAGTaGCTTATTCACTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREQNCRK*LIHWPW
Trigger: CCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTG...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTCAAAACTGTAGAAAGTaGCTTATTCACTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRQNCRK*LIHWPW
Trigger: CCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTG...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
CDS CCA 90 bp TCCAATCACATGTCATTGCTAGTCACTTACTTCTCATCTTCTCCTTaGCTCCAGCAATCATGTAGTAAAAGATGTGGAATGTCCTCTCGT +
Preference number: 5 (lower is better)
Translates to: SNHMSLLVTYFSSSP*LQQSCSKRCGMSSR
Trigger: ACGAGAGGACATTCCACATCTTTTACTACATGATTGCTGGAGCCAAGGAGAAGATGAGAAGTAAGTGACTAGCAATGACATGTGATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571910.2
ENST00000631759.1
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATATACTTGTGTCTTTCTaGCCCTTGTGGGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDILVSF*PLWEEA
Trigger: GGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTAT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATATACTTGTGTCTTTCTaGCCCTTGTGGGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDILVSF*PLWEEA
Trigger: GGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTAT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp AAGAATTCTCAAAGGCCTGACGTGAGAAGTTGGAAAGGTTTGCAGGTTAGGGAAGTGTTTCTTTCCTTCTaGAAGACGATATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: KNSQRPDVRSWKGLQVREVFLSF*KTIFPS
Trigger: GCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACAC...TTCCCTAACCTGCAAACCTTTCCAACTTCTCACGTCAGGCCTTTGAGAATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGACATCTCGCCCAACCTaGATACGAGGAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLTSRPT*IRGVRM
Trigger: CATCCTCACTCCTCGTATCAAGGTTGGGCGAGATGT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATACATCTCGCCCAACCTaGATACGAGGAGTGAGGATG +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDTSRPT*IRGVRM
Trigger: CATCCTCACTCCTCGTATCAAGGTTGGGCGAGATGT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATAGCAGGGAAGTCACGTaGTCATTCAGCGGGTCCATA +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDSREVT*SFSGSI
Trigger: TATGGACCCGCTGAATGACAACGTGACTTCCCTGCT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAGCAGGGAAGTCACGTaGTCATTCAGCGGGTCCATA +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSREVT*SFSGSI
Trigger: TATGGACCCGCTGAATGACAACGTGACTTCCCTGCT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGAGCAGGGAAGTCACGTaGTCATTCAGCGGGTCCATA +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSREVT*SFSGSI
Trigger: TATGGACCCGCTGAATGACAACGTGACTTCCCTGCT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTCCAGTTTCTTGATCTaGGCCTCAGCCGTGACCTTC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSSFLI*ASAVTF
Trigger: GAAGGTCACGGCTGAGGCCAAGATCAAGAAACTGGA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATTCATCCTCCAGTTTCTaGATCTTGGCCTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDSSSSF*ILASAV
Trigger: CACGGCTGAGGCCAAGATCAAGAAACTGGAGGATGA...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTAGCTTGGTAAGATTCTaGGCCTTTTCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGSLVRF*AFSSSS
Trigger: AGAAGAGGAAGAAAAGGCCAAGAATCTTACCAAGCT...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAGCTTCGTAGACACGTaGAGCTTCTGCCGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSFVDT*SFCRVS
Trigger: AGAAACCCGGCAGAAGCTCAACGTGTCTACGAAGCT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATACGAGTTGCCGCTGGTaGTCCAAATCAACAACCAGG +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDTSCRW*SKSTTR
Trigger: CCTGGTTGTTGATTTGGACAACCAGCGGCAACTCGT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGACGAGTTGCCGCTGGTaGTCCAAATCAACAACCAGG +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLTSCRW*SKSTTR
Trigger: CCTGGTTGTTGATTTGGACAACCAGCGGCAACTCGT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TCTCGAGTGTCCGTTTCCTCCTCAGAACCATCTGCATTTTCAATAACTCTACGTACTTCAATTTTTACCTaGAATACAGGGGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: SRVSVSSSEPSAFSITLRTSIFT*NTGVVG
Trigger: CCCTACTACCCCTGTATTCAAGGTAAAAATTGAAGT...ACGTAGAGTTATTGAAAATGCAGATGGTTCTGAGGAGGAAACGGACACTCGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452625.7
ENST00000612165.4
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTCACTGTTTTGGCGTaGCCGAAAGCCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLFTVLA*PKASRI
Trigger: GATTCTGGAGGCTTTCGGCAACGCCAAAACAGTGAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCTCTGGCTTGGCGAATaGCCCGTGATTTTTCTAGCA +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDLWLGE*PVIFLA
Trigger: TGCTAGAAAAATCACGGGCAATTCGCCAAGCCAGAG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGCATTTTCAATAACTCTACGTCCTCCAGACCTTCTAGAAGGAACGAAAGAGGTGTGTTTCTTTCCTTCTaGAAGACGATATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: CIFNNSTSSRPSRRNERGVFLSF*KTIFPS
Trigger: GCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACAC...ACCTCTTTCGTTCCTTCTAGAAGGTCTGGAGGACGTAGAGTTATTGAAAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000652121.1
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGCCTATCCTGTATAAGTaGGGGTCAAGTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLPILYK*GSSSRA
Trigger: AGCCCTGGAACTTGACCCCAACTTATACAGGATAGG...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGCTTTGAGCATTTTGTaGGTCCGCTCGAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLALSIL*VRSSSS
Trigger: AGAGGAACTCGAGCGGACCAACAAAATGCTCAAAGC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATAAGCTGTCTCTGCAGTaGCCTCCTCTTCTCCTCATT +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDKLSLQ*PPLLLI
Trigger: AATGAGGAGAAGAGGAGGCAACTGCAGAGACAGCTT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGCTTATTCACTGGCCTaGGTTCCATTGAAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDAYSLA*VPLKSA
Trigger: CGCAGACTTCAATGGAACCAAGGCCAGTGAATAAGC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATCCTCCAGAATCGGGTTaGCTTGTAGAAGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDPPESG*LVEAAF
Trigger: AAAAGCAGCTTCTACAAGCAAACCCGATTCTGGAGG...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTCTTCCATTTCGGCTTaGAGCATTTTGTTGGTCCGC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLSSISA*SILLVR
Trigger: GCGGACCAACAAAATGCTCAAAGCCGAAATGGAAGA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATACAGTCTGCTGGGTTTaGCTTTGTTCTGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDTVCWV*LCSGLL
Trigger: CAACAACCCAGAACAAAGCAAAACCCAGCAGACTGT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATGTTCGGAAGAAGATTTaGCTCTGCCCTATCCTGTAT +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDVRKKI*LCPILY
Trigger: ATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAAC...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATGTTCGGAAGAAGATTTaGCTCTGCCCTATCCTGTAT +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDVRKKI*LCPILY
Trigger: ATACAGGATAGGGCAGAGCAAAATCTTCTTCCGAAC...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGACTTCATTCTGCAGCTaGTGGACTTTGTCATTGAGC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLTSFCS*WTLSLS
Trigger: GCTCAATGACAAAGTCCACAAGCTGCAGAATGAAGT...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATATCTTCCAGCTCTCTTaGAAAGTCCTTCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDIFQLS*KVLHLS
Trigger: GCTCAGATGAAGGACTTTCAAAGAGAGCTGGAAGAT...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATATTTCCTTCAGCTTCTaGTCTTTCTGCTTCAGCGAC +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDISFSF*SFCFSD
Trigger: GTCGCTGAAGCAGAAAGACAAGAAGCTGAAGGAAAT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATAGCTTGGTAAGATTCTaGGCCTTTTCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDSLVRF*AFSSSS
Trigger: AGAAGAGGAAGAAAAGGCCAAGAATCTTACCAAGCT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGTTCTTCTCATTCTCTTaGGCTGTGGCAAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLFFSFS*AVAKIS
Trigger: TGAGATCTTTGCCACAGCCAAAGAGAATGAGAAGAA...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATTTCTTCTCATTCTCTTaGGCTGTGGCAAAGATCTCA +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDFFSFS*AVAKIS
Trigger: TGAGATCTTTGCCACAGCCAAAGAGAATGAGAAGAA...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TATGTTTTTCTAAAAACTCAGTGTCTGCACAATCCATTGATAGAACTGGAGGATCAAAACTGTAGAAAGTaGCTTATTCACTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: YVFLKTQCLHNPLIELEDQNCRK*LIHWPW
Trigger: CCAAGGCCAGTGAATAAGCAACTTTCTACAGTTTTG...ATCCTCCAGTTCTATCAATGGATTGTGCAGACACTGAGTTTTTAGAAAAACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TGTGATATTTGGAATTTGAGAATGGATTTAGACAATGCTAAGTACAGTCTGCTGGTGTTTCTTTCCTTCTaGAAGACGATATTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: CDIWNLRMDLDNAKYSLLVFLSF*KTIFPS
Trigger: GCTTGGAAATATCGTCTTCAAGAAGGAAAGAAACAC...CAGCAGACTGTACTTAGCATTGTCTAAATCCATTCTCAAATTCCAAATATCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
CDS-3UTR CAA 90 bp TTTTATATTCCTTGTGTGAGGGGTGTCTGTGATATTTGGAATTTGAGAATGGATACTTCAATTTTTACCTaGAATACAGGGGTAGTAGGG +
Preference number: 5 (lower is better)
Translates to: FYIPCVRGVCDIWNLRMDTSIFT*NTGVVG
Trigger: CCCTACTACCCCTGTATTCAAGGTAAAAATTGAAGT...ATCCATTCTCAAATTCCAAATATCACAGACACCCCTCACACAAGGAATATAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS GCA 72 bp ACGGAGGCACCGGCCAGTCCTAGCGGCCCTACCACGTaGCCCCTCCTGTGGGATAGATGGGGCAGGGCTGAC +
Preference number: 6 (lower is better)
Translates to: TEAPASPSGPTT*PLLWDRWGRAD
Trigger: GTCAGCCCTGCCCCATCTATCCCACAGGAGGGGGCACGTGGTAGGGCCGCTAGGACTGGCCGGTGCCTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS GCA 72 bp AGGCAGCGTGACTGTGGTGTCCAGGCGGCCCTCACCTaGTGTGTGGCTTTGCGGACCCGGTCGCTCATGGCC +
Preference number: 6 (lower is better)
Translates to: RQRDCGVQAALT*CVALRTRSLMA
Trigger: GGCCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGTGAGGGCCGCCTGGACACCACAGTCACGCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS TCA 72 bp AAGAGCATCCCAAGGCCCGGACTCCAGGGATGGCCGTaGGGTACGGGGAGCCAGCCACGCCGTGGCTGGAAA +
Preference number: 6 (lower is better)
Translates to: KSIPRPGLQGWP*GTGSQPRRGWK
Trigger: TTTCCAGCCACGGCGTGGCTGGCTCCCCGTACCTCACGGCCATCCCTGGAGTCCGGGCCTTGGGATGCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS GCA 72 bp GTGGTGTCCAGGCGGCCCTCACCTGCTGTGTGGCTTTaGGGACCCGGTCGCTCATGGCCTCCATGTTGCCCT +
Preference number: 6 (lower is better)
Translates to: VVSRRPSPAVWL*GPGRSWPPCCP
Trigger: AGGGCAACATGGAGGCCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGTGAGGGCCGCCTGGACACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CAA 72 bp TGTGGTGTCCAGGCGGCCCTCACCTGCTGTGTGGCTTaGCGGACCCGGTCGCTCATGGCCTCCATGTTGCCC +
Preference number: 6 (lower is better)
Translates to: CGVQAALTCCVA*RTRSLMASMLP
Trigger: GGGCAACATGGAGGCCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGTGAGGGCCGCCTGGACACCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS GCA 72 bp CGAGCTGCTCTTGGCCTAGCCCTAAAACATGGCGGCTaGAGTTGGGCCCCGAGGCCTCCAGGCCCTGGATTC +
Preference number: 6 (lower is better)
Translates to: RAALGLALKHGG*SWAPRPPGPGF
Trigger: GAATCCAGGGCCTGGAGGCCTCGGGGCCCAACTGCAGCCGCCATGTTTTAGGGCTAGGCCAAGAGCAGCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CCA 72 bp ACCCACCGTGAGCGGCACCTCAGGAGATCAGGGAGGTaGCTTTGGCCTCCCACAGGATGCATGGCCGGGACT +
Preference number: 6 (lower is better)
Translates to: THRERHLRRSGR*LWPPTGCMAGT
Trigger: AGTCCCGGCCATGCATCCTGTGGGAGGCCAAAGCCACCTCCCTGATCTCCTGAGGTGCCGCTCACGGTGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 72 bp GTGACTGTGGTGTCCAGGCGGCCCTCACCTGCTGTGTaGCTTTGCGGACCCGGTCGCTCATGGCCTCCATGT +
Preference number: 6 (lower is better)
Translates to: VTVVSRRPSPAV*LCGPGRSWPPC
Trigger: ACATGGAGGCCATGAGCGACCGGGTCCGCAAAGCCACACAGCAGGTGAGGGCCGCCTGGACACCACAGTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 72 bp GGGATGGCCGTGAGGTACGGGGAGCCAGCCACGCCGTaGCTGGAAAATGAGACACTGCAGCGTGGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: GMAVRYGEPATP*LENETLQRGEE
Trigger: CTCCTCTCCACGCTGCAGTGTCTCATTTTCCAGCCACGGCGTGGCTGGCTCCCCGTACCTCACGGCCATCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS GCA 72 bp AGGCCCCACCACCCTCTTGTCCCTCAATCCAGGGCCTaGACACAGGAAGCCGCCACGCGTGTGTTGACTGGT +
Preference number: 6 (lower is better)
Translates to: RPHHPLVPQSRA*TQEAATRVLTG
Trigger: ACCAGTCAACACACGCGTGGCGGCTTCCTGTGTGCAGGCCCTGGATTGAGGGACAAGAGGGTGGTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 72 bp AAGCAAACGAGCTGCTCTTGGCCTAGCCCTAAAACATaGCGGCTGCAGTTGGGCCCCGAGGCCTCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: KQTSCSWPSPKT*RLQLGPEASRP
Trigger: GGGCCTGGAGGCCTCGGGGCCCAACTGCAGCCGCCATGTTTTAGGGCTAGGCCAAGAGCAGCTCGTTTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CAA 90 bp TGGTGTAAGGGCCCTGGATCTCTACTCTCAGGCCCCACCACCCTCTaGTCCCTCAATCCAGGGCCTGCACACAGGAAGCCGCCACGCGTG +
Preference number: 6 (lower is better)
Translates to: WCKGPGSLLSGPTTL*SLNPGPAHRKPPRV
Trigger: CACGCGTGGCGGCTTCCTGTGTGCAGGCCCTGGATTGAGGGACAAGAGGGTGGTGGGGCCTGAGAGTAGAGATCCAGGGCCCTTACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CAA 90 bp CAGGGAAGCCCAAGAGAGCGCACTGAGACCATGCCTCTTCCTGCCTaGTTTGGCCTCTGCACGAGTCCCTTGATCCCGGGCACCCTGTCC +
Preference number: 6 (lower is better)
Translates to: QGSPRERTETMPLPA*FGLCTSPLIPGTLS
Trigger: GGACAGGGTGCCCGGGATCAAGGGACTCGTGCAGAGGCCAAACAAGGCAGGAAGAGGCATGGTCTCAGTGCGCTCTCTTGGGCTTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS TCA 72 bp TCGTTTCCTCGCCATGCAGCGAGTGGGGCTTTTCCCTaGAGGCTTGGTGCCCTGCGCCAGCTGCTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SFPRHAASGAFP*RLGALRQLLSS
Trigger: GGAAGAGAGCAGCTGGCGCAGGGCACCAAGCCTTCAGGGAAAAGCCCCACTCGCTGCATGGCGAGGAAACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573908.1
ENST00000632764.1
CDS TCA 72 bp CCAGGGCCTGCACACAGGAAGCCGCCACGCGTGTGTTaGCTGGTGCAGGATCCTGCTGCAGGAGAGACAGTA +
Preference number: 6 (lower is better)
Translates to: PGPAHRKPPRVC*LVQDPAAGETV
Trigger: TACTGTCTCTCCTGCAGCAGGATCCTGCACCAGTCAACACACGCGTGGCGGCTTCCTGTGTGCAGGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS GCA 72 bp CCCTTCTCCTCCTTAATGCTGGCTGCCTCGAAGCCCTaGTTCTCCGAGGGGACCCAGACGAGTCTCTTGGCG +
Preference number: 6 (lower is better)
Translates to: PFSSLMLAASKP*FSEGTQTSLLA
Trigger: CGCCAAGAGACTCGTCTGGGTCCCCTCGGAGAAGCAGGGCTTCGAGGCAGCCAGCATTAAGGAGGAGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000571505.1
ENST00000576790.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
ENST00000633799.1
ENST00000634050.1
ENST00000652121.1
CDS CCA 72 bp AGCCCGGAGCTAAAACCTCCTGGGAGCCAATCGGGATaGATGGACAGGGTGGTGGAAGCAGCCCTTGGGAGC +
Preference number: 6 (lower is better)
Translates to: SPELKPPGSQSG*MDRVVEAALGS
Trigger: GCTCCCAAGGGCTGCTTCCACCACCCTGTCCATCCATCCCGATTGGCTCCCAGGAGGTTTTAGCTCCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 72 bp CGTGAGCGGCACCTCAGGAGATCAGGGAGGTGGCTTTaGCCTCCCACAGGATGCATGGCCGGGACTCAAGAT +
Preference number: 6 (lower is better)
Translates to: RERHLRRSGRWL*PPTGCMAGTQD
Trigger: ATCTTGAGTCCCGGCCATGCATCCTGTGGGAGGCCAAAGCCACCTCCCTGATCTCCTGAGGTGCCGCTCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CAA 72 bp TCCAGGGCCTGCACACAGGAAGCCGCCACGCGTGTGTaGACTGGTGCAGGATCCTGCTGCAGGAGAGACAGT +
Preference number: 6 (lower is better)
Translates to: SRACTQEAATRV*TGAGSCCRRDS
Trigger: ACTGTCTCTCCTGCAGCAGGATCCTGCACCAGTCAACACACGCGTGGCGGCTTCCTGTGTGCAGGCCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS TCA 72 bp ACTAGTGGAGAGGAAACTGGATGGCGAGCTCGGATCTaGCGCACCTCCCAGGCCGGAGCGTCCAAATCTCCC +
Preference number: 6 (lower is better)
Translates to: TSGEETGWRARI*RTSQAGASKSP
Trigger: GGGAGATTTGGACGCTCCGGCCTGGGAGGTGCGTCAGATCCGAGCTCGCCATCCAGTTTCCTCTCCACTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000616422.4
ENST00000634050.1
CDS GCA 72 bp GAAGCCGCCACGCGTGTGTTGACTGGTGCAGGATCCTaGTGCAGGAGAGACAGTAGGCAGCGTGACTGTGGT +
Preference number: 6 (lower is better)
Translates to: EAATRVLTGAGS*CRRDSRQRDCG
Trigger: ACCACAGTCACGCTGCCTACTGTCTCTCCTGCAGCAGGATCCTGCACCAGTCAACACACGCGTGGCGGCTTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CAA 72 bp GTACACAGCCCACCGGCCCCCTCTGCCGGGATGCCTTaGCACAAACGCGGTCACGTGATTAATCATGGCAGG +
Preference number: 6 (lower is better)
Translates to: VHSPPAPSAGMP*HKRGHVINHGR
Trigger: CCTGCCATGATTAATCACGTGACCGCGTTTGTGCAAAGGCATCCCGGCAGAGGGGGCCGGTGGGCTGTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CAA 72 bp CCAAGAGAGCGCACTGAGACCATGCCTCTTCCTGCCTaGTTTGGCCTCTGCACGAGTCCCTTGATCCCGGGC +
Preference number: 6 (lower is better)
Translates to: PRERTETMPLPA*FGLCTSPLIPG
Trigger: GCCCGGGATCAAGGGACTCGTGCAGAGGCCAAACAAGGCAGGAAGAGGCATGGTCTCAGTGCGCTCTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CAA 90 bp GCTGAGACTGTACACAGCCCACCGGCCCCCTCTGCCGGGATGCCTTaGCACAAACGCGGTCACGTGATTAATCATGGCAGGAAAGGGCCA +
Preference number: 6 (lower is better)
Translates to: AETVHSPPAPSAGMP*HKRGHVINHGRKGP
Trigger: TGGCCCTTTCCTGCCATGATTAATCACGTGACCGCGTTTGTGCAAAGGCATCCCGGCAGAGGGGGCCGGTGGGCTGTGTACAGTCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS TCA 72 bp ACAAGCCGGCCATGGTGGCTGCCCCAGAGTCCCCTCTaGGGACGCAAAGTGACATCTGGAATGGCGAACACT +
Preference number: 6 (lower is better)
Translates to: TSRPWWLPQSPL*GRKVTSGMANT
Trigger: AGTGTTCGCCATTCCAGATGTCACTTTGCGTCCTCAGAGGGGACTCTGGGGCAGCCACCATGGCCGGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS TCA 72 bp TTGGCCTCCCACAGGATGCATGGCCGGGACTCAAGATaGCCCCTGAGAGTTCAGACCCCAGCCTTATCCTCG +
Preference number: 6 (lower is better)
Translates to: LASHRMHGRDSR*PLRVQTPALSS
Trigger: CGAGGATAAGGCTGGGGTCTGAACTCTCAGGGGTCATCTTGAGTCCCGGCCATGCATCCTGTGGGAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS TCA 72 bp CATGAGGCGGACTCAGGGAAGCCCAAGAGAGCGCACTaGGACCATGCCTCTTCCTGCCTTGTTTGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: HEADSGKPKRAH*DHASSCLVWPL
Trigger: CAGAGGCCAAACAAGGCAGGAAGAGGCATGGTCTCAGTGCGCTCTCTTGGGCTTCCCTGAGTCCGCCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS GCA 72 bp TTCCTACCTTCCCGACAGGCTACTGGCCAGCTCCTCTaGCAGTTCCTCCTTCTCGAGGTCCGCTTGTTTGCG +
Preference number: 6 (lower is better)
Translates to: FLPSRQATGQLL*QFLLLEVRLFA
Trigger: CGCAAACAAGCGGACCTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAAGGTAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS GCA 72 bp ACTGAGACCATGCCTCTTCCTGCCTTGTTTGGCCTCTaGACGAGTCCCTTGATCCCGGGCACCCTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: TETMPLPALFGL*TSPLIPGTLSS
Trigger: AGAGGACAGGGTGCCCGGGATCAAGGGACTCGTGCAGAGGCCAAACAAGGCAGGAAGAGGCATGGTCTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 72 bp GAAGCAGGAATAAACCACAGAAGGGAGTGGCGGCTGTaGGCACAAGGGGCATTTGCAGGCCGAAAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: EAGINHRREWRL*AQGAFAGRKEP
Trigger: GGGCTCCTTTCGGCCTGCAAATGCCCCTTGTGCCCACAGCCGCCACTCCCTTCTGTGGTTTATTCCTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 72 bp GATCAGGGAGGTGGCTTTGGCCTCCCACAGGATGCATaGCCGGGACTCAAGATGACCCCTGAGAGTTCAGAC +
Preference number: 6 (lower is better)
Translates to: DQGGGFGLPQDA*PGLKMTPESSD
Trigger: GTCTGAACTCTCAGGGGTCATCTTGAGTCCCGGCCATGCATCCTGTGGGAGGCCAAAGCCACCTCCCTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CAA 72 bp AGGATCCCCAGGAAGGAAGCCCCTTGCCGATGGGTCTaGTCCAGGGCTTTGTTCACGCGGGTGAGTATCCAG +
Preference number: 6 (lower is better)
Translates to: RIPRKEAPCRWV*SRALFTRVSIQ
Trigger: CTGGATACTCACCCGCGTGAACAAAGCCCTGGACAAGACCCATCGGCAAGGGGCTTCCTTCCTGGGGATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000570785.1
ENST00000576790.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
ENST00000632632.1
ENST00000634050.1
ENST00000652121.1
CDS CCA 72 bp GTTGTCACAACTGGAGGGAAGGGGGCTGTCGGCATCTaGCGGGTCGAGGCCAGGGATGTTGTGAAACATTCT +
Preference number: 6 (lower is better)
Translates to: VVTTGGKGAVGI*RVEARDVVKHS
Trigger: AGAATGTTTCACAACATCCCTGGCCTCGACCCGCCAGATGCCGACAGCCCCCTTCCCTCCAGTTGTGACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS CCA 72 bp CCAGGCAAGGCAGGGCCCGGGTCTGATCTCAGTGCCTaGCCCACACTAAGCTTAGTGATTAAGGAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: PGKAGPGSDLSA*PTLSLVIKEKQ
Trigger: CTGCTTCTCCTTAATCACTAAGCTTAGTGTGGGCCAGGCACTGAGATCAGACCCGGGCCCTGCCTTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 72 bp GAGGGTCAAATTGTGAGGGCTCCTAGGAGTACTGGTTaGCCCGGTAGAAGCAGCAGGATCACCCAGAGGGTC +
Preference number: 6 (lower is better)
Translates to: EGQIVRAPRSTG*PGRSSRITQRV
Trigger: GACCCTCTGGGTGATCCTGCTGCTTCTACCGGGCCAACCAGTACTCCTAGGAGCCCTCACAATTTGACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CAA 72 bp TGGGAACTGCCACTCACCGTGATACTTGTGTCTTTCTaGCCCTTGTGGGAGGAGGCCACCACGGCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: WELPLTVILVSF*PLWEEATTARY
Trigger: GTACCTGGCCGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTATCACGGTGAGTGGCAGTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS TCA 72 bp TCCCTTGCTTTCTCTGTCCTGGAGTCGCCTGGAGAATaGTGCCTGTTCACCCTACACCACAAGGGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SLAFSVLESPGE*CLFTLHHKGLQ
Trigger: CTGCAGCCCCTTGTGGTGTAGGGTGAACAGGCATCATTCTCCAGGCGACTCCAGGACAGAGAAAGCAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS GCA 72 bp AGCAGGATCACCCAGAGGGTCAAGGAACCGAGAGGCTaGGTCGCCCACCTGGATGTTGAAATCATGGAGAAC +
Preference number: 6 (lower is better)
Translates to: SRITQRVKEPRG*VAHLDVEIMEN
Trigger: GTTCTCCATGATTTCAACATCCAGGTGGGCGACGCAGCCTCTCGGTTCCTTGACCCTCTGGGTGATCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 72 bp CTTTGCTGCCCAACTTCAGCCGTTAACCCCATGCTGTaGGCAAGCAGGAGGCAGATGGTACAGAGGATGGGA +
Preference number: 6 (lower is better)
Translates to: LCCPTSAVNPML*ASRRQMVQRMG
Trigger: TCCCATCCTCTGTACCATCTGCCTCCTGCTTGCCCACAGCATGGGGTTAACGGCTGAAGTTGGGCAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571910.2
ENST00000631759.1
CDS CCA 72 bp CGAGAGGCTGCGTCGCCCACCTGGATGTTGAAATCATaGAGAACTGTGAGGAGTGGTGTGGGAGACAGGAAG +
Preference number: 6 (lower is better)
Translates to: REAASPTWMLKS*RTVRSGVGDRK
Trigger: CTTCCTGTCTCCCACACCACTCCTCACAGTTCTCCATGATTTCAACATCCAGGTGGGCGACGCAGCCTCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 72 bp TCCTCCATTCAGTTTCCTACCTTCCCGACAGGCTACTaGCCAGCTCCTCTGCCAGTTCCTCCTTCTCGAGGT +
Preference number: 6 (lower is better)
Translates to: SSIQFPTFPTGY*PAPLPVPPSRG
Trigger: ACCTCGAGAAGGAGGAACTGGCAGAGGAGCTGGCCAGTAGCCTGTCGGGAAGGTAGGAAACTGAATGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 72 bp CCTGTTCACCCTACACCACAAGGGGCTGCAGGTTACTaGATGGTCCCTAGTGCCCACCATGGAACTAGTGCT +
Preference number: 6 (lower is better)
Translates to: PVHPTPQGAAGY*MVPSAHHGTSA
Trigger: AGCACTAGTTCCATGGTGGGCACTAGGGACCATCCAGTAACCTGCAGCCCCTTGTGGTGTAGGGTGAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 72 bp CAGACAGAGAGCGACCCCACCTGTCCCTGCAGTCCCTaGGGTATGACTTTCATTAAGGAACCCGAACCCTTC +
Preference number: 6 (lower is better)
Translates to: QTESDPTCPCSP*GMTFIKEPEPF
Trigger: GAAGGGTTCGGGTTCCTTAATGAAAGTCATACCCCAGGGACTGCAGGGACAGGTGGGGTCGCTCTCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS CAA 72 bp TGCTTTTCCAGCTCTCCCGTGATACTTGTGTCTTTCTaGCCCTTGTGGGAGGAGGCCACCACGGCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: CFSSSPVILVSF*PLWEEATTARY
Trigger: GTACCTGGCCGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTATCACGGGAGAGCTGGAAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000576790.7
ENST00000616422.4
ENST00000634050.1
ENST00000652121.1
CDS CAA 72 bp GCAAAAGATGGGCCTTGCGTGATACTTGTGTCTTTCTaGCCCTTGTGGGAGGAGGCCACCACGGCCAGGTAC +
Preference number: 6 (lower is better)
Translates to: AKDGPCVILVSF*PLWEEATTARY
Trigger: GTACCTGGCCGTGGTGGCCTCCTCCCACAAGGGCAAGAAAGACACAAGTATCACGCAAGGCCCATCTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS CAA 90 bp TCCACAAGTGTCAGTGCCACCCAGGCTGAGCGAGTGACTTGTCCCTaGCTTTCTCTGTCCTGGAGTCGCCTGGAGAATGATGCCTGTTCA +
Preference number: 6 (lower is better)
Translates to: STSVSATQAERVTCP*LSLSWSRLENDACS
Trigger: TGAACAGGCATCATTCTCCAGGCGACTCCAGGACAGAGAAAGCAAGGGACAAGTCACTCGCTCAGCCTGGGTGGCACTGACACTTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS TCA 72 bp ACAAAACGGGCCCCCTTCTGGAGGGATGCTTCTAGCTaGGCCAAGAAATCACCCACACTCAACAGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: TKRAPFWRDASS*AKKSPTLNRPA
Trigger: AGCAGGCCTGTTGAGTGTGGGTGATTTCTTGGCTCAGCTAGAAGCATCCCTCCAGAAGGGGGCCCGTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS TCA 72 bp ACCAGGCAGACAATGGGATGCCTGAGGGTCAAATTGTaGGGGCTCCTAGGAGTACTGGTTGGCCCGGTAGAA +
Preference number: 6 (lower is better)
Translates to: TRQTMGCLRVKL*GLLGVLVGPVE
Trigger: TTCTACCGGGCCAACCAGTACTCCTAGGAGCCCTCACAATTTGACCCTCAGGCATCCCATTGTCTGCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS TCA 72 bp AAGAGGTGCTTCCACAAGTGTCAGTGCCACCCAGGCTaGGCGAGTGACTTGTCCCTTGCTTTCTCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: KRCFHKCQCHPG*ASDLSLAFSVL
Trigger: CAGGACAGAGAAAGCAAGGGACAAGTCACTCGCTCAGCCTGGGTGGCACTGACACTTGTGGAAGCACCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS TCA 72 bp GGTCAAGTTGTCAGGCGGAACCAACATCTGCTGAGCTaGAACCACCCCAGGCCTGACAGCAACAGAACGTGT +
Preference number: 6 (lower is better)
Translates to: GQVVRRNQHLLS*NHPRPDSNRTC
Trigger: ACACGTTCTGTTGCTGTCAGGCCTGGGGTGGTTTCAGCTCAGCAGATGTTGGTTCCGCCTGACAACTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631759.1
CDS TCA 72 bp CCACAGGTCAAGTTGTCAGGCGGAACCAACATCTGCTaGGCTGAAACCACCCCAGGCCTGACAGCAACAGAA +
Preference number: 6 (lower is better)
Translates to: PQVKLSGGTNIC*AETTPGLTATE
Trigger: TTCTGTTGCTGTCAGGCCTGGGGTGGTTTCAGCTCAGCAGATGTTGGTTCCGCCTGACAACTTGACCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631759.1
CDS GCA 72 bp TTTTGGTTGTCACATTGCAGGGTGGTGGGGGACTACTaGAGCCGGTGGGTAGAGGCCAGAAATGTAAGCACC +
Preference number: 6 (lower is better)
Translates to: FWLSHCRVVGDY*SRWVEARNVST
Trigger: GGTGCTTACATTTCTGGCCTCTACCCACCGGCTGCAGTAGTCCCCCACCACCCTGCAATGTGACAACCAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 72 bp ATCTGGAATGGCGAACACTGGAGACACCCCATGCCGTaGTCAGATCTCCATCCTACCATCTTCCCACCCACA +
Preference number: 6 (lower is better)
Translates to: IWNGEHWRHPMP*SDLHPTIFPPT
Trigger: TGTGGGTGGGAAGATGGTAGGATGGAGATCTGACCACGGCATGGGGTGTCTCCAGTGTTCGCCATTCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS CCA 72 bp TTCCCTTCCTTATTTTTCCAGGCATCAGGGCTGGGCTaGACAGGAGCCGGGAAAGTGTCTAGAGGGGACAAG +
Preference number: 6 (lower is better)
Translates to: FPSLFFQASGLG*TGAGKVSRGDK
Trigger: CTTGTCCCCTCTAGACACTTTCCCGGCTCCTGTCCAGCCCAGCCCTGATGCCTGGAAAAATAAGGAAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CCA 72 bp TCACATTGCAGGGTGGTGGGGGACTACTGCAGCCGGTaGGTAGAGGCCAGAAATGTAAGCACCTGCTACTTT +
Preference number: 6 (lower is better)
Translates to: SHCRVVGDYCSR*VEARNVSTCYF
Trigger: AAAGTAGCAGGTGCTTACATTTCTGGCCTCTACCCACCGGCTGCAGTAGTCCCCCACCACCCTGCAATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 72 bp ATTAGAAGACTCATCTGTAGTTACACAGCCAGGAAGTaGACAGCCGGGACTCAGGCCGGGTCCGTGTCAGCA +
Preference number: 6 (lower is better)
Translates to: IRRLICSYTARK*TAGTQAGSVSA
Trigger: TGCTGACACGGACCCGGCCTGAGTCCCGGCTGTCCACTTCCTGGCTGTGTAACTACAGATGAGTCTTCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CAA 90 bp CCTTCCATCACCAACGCCTCCTTCGGCAGTCAGGGTTTCCAAGTATaGTCTATTGGGGAAATCCTGAGAGCACCGTCCTTCCACAGGTCG +
Preference number: 6 (lower is better)
Translates to: PSITNASFGSQGFQV*SIGEILRAPSFHRS
Trigger: CGACCTGTGGAAGGACGGTGCTCTCAGGATTTCCCCAATAGACAATACTTGGAAACCCTGACTGCCGAAGGAGGCGTTGGTGATGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS TCA 72 bp CCTCTGCCGGGATGCCTTTGCACAAACGCGGTCACGTaGTTAATCATGGCAGGAAAGGGCCAATGTGGTAAG +
Preference number: 6 (lower is better)
Translates to: PLPGCLCTNAVT*LIMAGKGQCGK
Trigger: CTTACCACATTGGCCCTTTCCTGCCATGATTAATCACGTGACCGCGTTTGTGCAAAGGCATCCCGGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS TCA 72 bp AATGATTGCAGCAATGCAAGAGGGGGAACCGGATGTTaGGGATGCGCGACGGGGGTTACTAGACAGCTGGTT +
Preference number: 6 (lower is better)
Translates to: NDCSNARGGTGC*GCATGVTRQLV
Trigger: AACCAGCTGTCTAGTAACCCCCGTCGCGCATCCTCAACATCCGGTTCCCCCTCTTGCATTGCTGCAATCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS TCA 72 bp TGTTGCGGGAGGGCCAAGAGCTCCCAAAGCTGGCCTTaGCCATCTTGGGTCCATGTGTCAATGAATGAACCT +
Preference number: 6 (lower is better)
Translates to: CCGRAKSSQSWP*PSWVHVSMNEP
Trigger: AGGTTCATTCATTGACACATGGACCCAAGATGGTCAAGGCCAGCTTTGGGAGCTCTTGGCCCTCCCGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS GCA 72 bp TTCAAGACCAGGGCCTGCTCATCTGTGCAACATCACTaGCACTCAAAGCCACTGCCTTGCACAATGTCGGTG +
Preference number: 6 (lower is better)
Translates to: FKTRACSSVQHH*HSKPLPCTMSV
Trigger: CACCGACATTGTGCAAGGCAGTGGCTTTGAGTGGCAGTGATGTTGCACAGATGAGCAGGCCCTGGTCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CCA 72 bp TTGTCCACAAAGAGGAACTTCTCATCGTCACTGAGTTaGCCCTTCTGCGCCATGGTGCCTTGTTGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: LSTKRNFSSSLS*PFCAMVPCWSQ
Trigger: CTGGGACCAACAAGGCACCATGGCGCAGAAGGGCCAACTCAGTGACGATGAGAAGTTCCTCTTTGTGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000571505.1
ENST00000576790.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
ENST00000633799.1
ENST00000634050.1
ENST00000652121.1
CDS CCA 72 bp GATGTTGAGGATGCGCGACGGGGGTTACTAGACAGCTaGTTTGGAGCTGGGTCAGAGGCTGATGGCATTAAT +
Preference number: 6 (lower is better)
Translates to: DVEDARRGLLDS*FGAGSEADGIN
Trigger: ATTAATGCCATCAGCCTCTGACCCAGCTCCAAACCAGCTGTCTAGTAACCCCCGTCGCGCATCCTCAACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 72 bp GAACCCTTCCCCGGCTCCCAGTCTTCACAGAACAGCTaGGACATCACACCCTCCAAAACCCTGCCTTATAAA +
Preference number: 6 (lower is better)
Translates to: EPFPGSQSSQNS*DITPSKTLPYK
Trigger: TTTATAAGGCAGGGTTTTGGAGGGTGTGATGTCCCAGCTGTTCTGTGAAGACTGGGAGCCGGGGAAGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS CAA 72 bp GTTTGTATCTCGGTTGGGCTGCAAGCTGGAGACCGGTaGGCTAAATCATGGCCTCTGATTGGGAACTGCCAC +
Preference number: 6 (lower is better)
Translates to: VCISVGLQAGDR*AKSWPLIGNCH
Trigger: GTGGCAGTTCCCAATCAGAGGCCATGATTTAGCCAACCGGTCTCCAGCTTGCAGCCCAACCGAGATACAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS TCA 72 bp TTTCCAGCTCTCCGTAGGCAAAAGATGGGCCTTGCGTaGTACTTGTGTCTTTCTTGCCCTTGTGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: FPALRRQKMGLA*YLCLSCPCGRR
Trigger: CCTCCTCCCACAAGGGCAAGAAAGACACAAGTATCACGCAAGGCCCATCTTTTGCCTACGGAGAGCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS TCA 72 bp GCCCCATTCTATGAGGCTCAACTTCATGAAGACGATTaGGAAACCCACCGTGAGCGGCACCTCAGGAGATCA +
Preference number: 6 (lower is better)
Translates to: APFYEAQLHEDD*ETHRERHLRRS
Trigger: TGATCTCCTGAGGTGCCGCTCACGGTGGGTTTCTCAATCGTCTTCATGAAGTTGAGCCTCATAGAATGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS GCA 72 bp ATTTGCCCTGCCAACAGGAAAACACAGTTCAGGCTTTaGTGCCCAACTTCAGCCGTTAACCCCATGCTGTGG +
Preference number: 6 (lower is better)
Translates to: ICPANRKTQFRL*CPTSAVNPMLW
Trigger: CCACAGCATGGGGTTAACGGCTGAAGTTGGGCAGCAAAGCCTGAACTGTGTTTTCCTGTTGGCAGGGCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571910.2
ENST00000631759.1
CDS CCA 72 bp CCACACAGCCTCTGGGGCCATTGTTCCCACTCACTATaGCTGGAAACCAACTTGCCAGAGACAATTCTAGGA +
Preference number: 6 (lower is better)
Translates to: PHSLWGHCSHSL*LETNLPETILG
Trigger: TCCTAGAATTGTCTCTGGCAAGTTGGTTTCCAGCCATAGTGAGTGGGAACAATGGCCCCAGAGGCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS CCA 72 bp CCTCAGCACTACTGGCATCTTGTAGGGATTCTGTGCTaGGGGTTGAGGGACCATCCTGTGCATTGTACAATG +
Preference number: 6 (lower is better)
Translates to: PQHYWHLVGILC*GLRDHPVHCTM
Trigger: CATTGTACAATGCACAGGATGGTCCCTCAACCCCCAGCACAGAATCCCTACAAGATGCCAGTAGTGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CAA 72 bp ACCAACGCCTCCTTCGGCAGTCAGGGTTTCCAAGTATaGTCTATTGGGGAAATCCTGAGAGCACCGTCCTTC +
Preference number: 6 (lower is better)
Translates to: TNASFGSQGFQV*SIGEILRAPSF
Trigger: GAAGGACGGTGCTCTCAGGATTTCCCCAATAGACAATACTTGGAAACCCTGACTGCCGAAGGAGGCGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS CAA 90 bp ACAGCAACAGGGAACTTAGTAACGAAACTTGACAAGTTAGGTCTGTaGCGGGAGGGCCAAGAGCTCCCAAAGCTGGCCTTGACCATCTTG +
Preference number: 6 (lower is better)
Translates to: TATGNLVTKLDKLGL*REGQELPKLALTIL
Trigger: CAAGATGGTCAAGGCCAGCTTTGGGAGCTCTTGGCCCTCCCGCAACAGACCTAACTTGTCAAGTTTCGTTACTAAGTTCCCTGTTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS TCA 72 bp ATCCTAGGCCCCACCCTGCCTTCCATGTCACCAAGTTaGTGGCCACACATTCTTAACGTTCAAGTTCACCAG +
Preference number: 6 (lower is better)
Translates to: ILGPTLPSMSPS*WPHILNVQVHQ
Trigger: CTGGTGAACTTGAACGTTAAGAATGTGTGGCCATCAACTTGGTGACATGGAAGGCAGGGTGGGGCCTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS TCA 72 bp GTCAGGGTTTCCAAGTATTGTCTATTGGGGAAATCCTaGGAGCACCGTCCTTCCACAGGTCGGCCACAAACT +
Preference number: 6 (lower is better)
Translates to: VRVSKYCLLGKS*EHRPSTGRPQT
Trigger: AGTTTGTGGCCGACCTGTGGAAGGACGGTGCTCTCAGGATTTCCCCAATAGACAATACTTGGAAACCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652121.1
CDS GCA 72 bp GCAGTGCACCACCTGTCCCACTGTACATGGCAGTCGTaGTGCTGTTCATGTTTAACAAGCAGCCTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: AVHHLSHCTWQS*CCSCLTSSLLQ
Trigger: TTGAAGAAGGCTGCTTGTTAAACATGAACAGCAGCACGACTGCCATGTACAGTGGGACAGGTGGTGCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CCA 72 bp ATCATGGCAGGAAAGGGCCAATGTGGTAAGTTAAGCTaGGAAAGCAAACGAGCTGCTCTTGGCCTAGCCCTA +
Preference number: 6 (lower is better)
Translates to: IMAGKGQCGKLS*ESKRAALGLAL
Trigger: TAGGGCTAGGCCAAGAGCAGCTCGTTTGCTTTCCCAGCTTAACTTACCACATTGGCCCTTTCCTGCCATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CCA 72 bp ATGACCTGCACAGCAACTCCACAACTGAAAAGTCTCTaGATGCATCCTCCCTTCCTCCTTTTCCTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: MTCTATPQLKSL*MHPPFLLFLQG
Trigger: TCCCTGGAGGAAAAGGAGGAAGGGAGGATGCATCCAGAGACTTTTCAGTTGTGGAGTTGCTGTGCAGGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CAA 72 bp CTGCTTTTCCAGCTCTCCGTAGGCAAAAGATGGGCCTaGCGTGATACTTGTGTCTTTCTTGCCCTTGTGGGA +
Preference number: 6 (lower is better)
Translates to: LLFQLSVGKRWA*RDTCVFLALVG
Trigger: TCCCACAAGGGCAAGAAAGACACAAGTATCACGCAAGGCCCATCTTTTGCCTACGGAGAGCTGGAAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396324.7
ENST00000452625.7
ENST00000612165.4
ENST00000621545.2
CDS CAA 72 bp CACTACTGGCATCTTGTAGGGATTCTGTGCTGGGGGTaGAGGGACCATCCTGTGCATTGTACAATGCTTAGG +
Preference number: 6 (lower is better)
Translates to: HYWHLVGILCWG*RDHPVHCTMLR
Trigger: CCTAAGCATTGTACAATGCACAGGATGGTCCCTCAACCCCCAGCACAGAATCCCTACAAGATGCCAGTAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CAA 90 bp GGCCTGCTCATCTGTGCAACATCACTGCCACTCAAAGCCACTGCCTaGCACAATGTCGGTGATGTCATTTACATCATGATGAATGGTGCC +
Preference number: 6 (lower is better)
Translates to: GLLICATSLPLKATA*HNVGDVIYIMMNGA
Trigger: GGCACCATTCATCATGATGTAAATGACATCACCGACATTGTGCAAGGCAGTGGCTTTGAGTGGCAGTGATGTTGCACAGATGAGCAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS TCA 72 bp AGTTTTTGTCCACAAAGAGGAACTTCTCATCGTCACTaGGTTGGCCCTTCTGCGCCATGGTGCCTTGTTGGT +
Preference number: 6 (lower is better)
Translates to: SFCPQRGTSHRH*VGPSAPWCLVG
Trigger: ACCAACAAGGCACCATGGCGCAGAAGGGCCAACTCAGTGACGATGAGAAGTTCCTCTTTGTGGACAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000571505.1
ENST00000576790.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
ENST00000633799.1
ENST00000634050.1
ENST00000652121.1
CDS TCA 72 bp AAAGCTGGCCTTGACCATCTTGGGTCCATGTGTCAATaGATGAACCTGACACATCAGGGTCCTACTGGTGAG +
Preference number: 6 (lower is better)
Translates to: KAGLDHLGSMCQ*MNLTHQGPTGE
Trigger: CTCACCAGTAGGACCCTGATGTGTCAGGTTCATTCATTGACACATGGACCCAAGATGGTCAAGGCCAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS TCA 72 bp AGGAAGGACAGCAACAGGGAACTTAGTAACGAAACTTaGCAAGTTAGGTCTGTTGCGGGAGGGCCAAGAGCT +
Preference number: 6 (lower is better)
Translates to: RKDSNRELSNET*QVRSVAGGPRA
Trigger: AGCTCTTGGCCCTCCCGCAACAGACCTAACTTGTCAAGTTTCGTTACTAAGTTCCCTGTTGCTGTCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS GCA 72 bp CCGAAAGCCTCCAGAATCGGGTTTGCTTGTAGAAGCTaGTTTTCCAGCTCTCCCGTGATACTTGTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: PKASRIGFACRS*FSSSPVILVSF
Trigger: GAAAGACACAAGTATCACGGGAGAGCTGGAAAAGCAGCTTCTACAAGCAAACCCGATTCTGGAGGCTTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300036.6
ENST00000576790.7
ENST00000616422.4
ENST00000634050.1
ENST00000652121.1
CDS GCA 72 bp TCTTGCAATGATGTTCTGTTTGTATCTCGGTTGGGCTaGAAGCTGGAGACCGGTTGGCTAAATCATGGCCTC +
Preference number: 6 (lower is better)
Translates to: SCNDVLFVSRLG*KLETGWLNHGL
Trigger: GAGGCCATGATTTAGCCAACCGGTCTCCAGCTTGCAGCCCAACCGAGATACAAACAGAACATCATTGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS GCA 72 bp AATGCACAAAACCCACCAGGAATCCTCTTAGCGGACTaGGGAATAAAGCTTCAAAGCAGGTTGCCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: NAQNPPGILLAD*GIKLQSRLPEL
Trigger: GAGCTCAGGCAACCTGCTTTGAAGCTTTATTCCGCAGTCCGCTAAGAGGATTCCTGGTGGGTTTTGTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CCA 72 bp GGAGGAATCCGGGAACCCAAAAGGTACCTTAACCCCTaGGACGTTACAGAGATTCATGAAAGGAGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: GGIREPKRYLNP*DVTEIHERSAS
Trigger: AGAAGCACTCCTTTCATGAATCTCTGTAACGTCCCAGGGGTTAAGGTACCTTTTGGGTTCCCGGATTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS CCA 72 bp TCATTCCTCCGCATGCTAGGAAGGCATCAGGGTACCTaGTCTACAGGACAAAGCAGGAAGCTGCTATTTGTT +
Preference number: 6 (lower is better)
Translates to: SFLRMLGRHQGT*STGQSRKLLFV
Trigger: AACAAATAGCAGCTTCCTGCTTTGTCCTGTAGACCAGGTACCCTGATGCCTTCCTAGCATGCGGAGGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CCA 72 bp GACGCTCTCAACTTCATTCTAAGGGTGCCAAGAGACTaGTTAGTCAAAGCCTCTAGAAGGGGATCCTCGTTG +
Preference number: 6 (lower is better)
Translates to: DALNFILRVPRD*LVKASRRGSSL
Trigger: CAACGAGGATCCCCTTCTAGAGGCTTTGACTAACCAGTCTCTTGGCACCCTTAGAATGAAGTTGAGAGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571275.1
ENST00000633845.1
CDS TCA 72 bp CAAAAACCTCCTTCCATTTCCGATGATAGTTCGCTATaGAAAAGGCCAGGAGCTAGCCTCGCATGGACTGGT +
Preference number: 6 (lower is better)
Translates to: QKPPSISDDSSL*KRPGASLAWTG
Trigger: ACCAGTCCATGCGAGGCTAGCTCCTGGCCTTTTTCATAGCGAACTATCATCGGAAATGGAAGGAGGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576164.6
ENST00000631693.1
CDS CCA 72 bp GGCAAAGGGATATGTTGTCATAATAAATTCGATCAGTaGTTCCGAGCCAGGGACAATGTTGCCCCCACCGAT +
Preference number: 6 (lower is better)
Translates to: GKGICCHNKFDQ*FRARDNVAPTD
Trigger: ATCGGTGGGGGCAACATTGTCCCTGGCTCGGAACCACTGATCGAATTTATTATGACAACATATCCCTTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574119.1
ENST00000632352.1
CDS CCA 72 bp GGTGGCAGTCGTACCCTCCCATCTCTAGAGGACTTCTaGCAACATCTAGAGACATTTTTGGTTGTCACATTG +
Preference number: 6 (lower is better)
Translates to: GGSRTLPSLEDF*QHLETFLVVTL
Trigger: CAATGTGACAACCAAAAATGTCTCTAGATGTTGCCAGAAGTCCTCTAGAGATGGGAGGGTACGACTGCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 72 bp TGTGAGTCCCGTGCCCAGCCAAGCTTGAGTTTCATTTaGGTTGTGCTTTCACCAAATGATTGCAGCAATGCA +
Preference number: 6 (lower is better)
Translates to: CESRAQPSLSFI*VVLSPNDCSNA
Trigger: TGCATTGCTGCAATCATTTGGTGAAAGCACAACCCAAATGAAACTCAAGCTTGGCTGGGCACGGGACTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CCA 72 bp GGTAGAGTAACTTGCCCAAGGTTCATCAGCAAAAACTaGGGCATCCACGATGAGAACCCAGGTCTAAAACTC +
Preference number: 6 (lower is better)
Translates to: GRVTCPRFISKN*GIHDENPGLKL
Trigger: GAGTTTTAGACCTGGGTTCTCATCGTGGATGCCCCAGTTTTTGCTGATGAACCTTGGGCAAGTTACTCTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS TCA 72 bp AAAGGAAGGAAGGAAGGGAGGGAGGGAAGGAAGGAGTaGGGGAGGGAGGTAAAAACAACAACAATCATTTCT +
Preference number: 6 (lower is better)
Translates to: KGRKEGREGRKE*GREVKTTTIIS
Trigger: AGAAATGATTGTTGTTGTTTTTACCTCCCTCCCTCACTCCTTCCTTCCCTCCCTCCCTTCCTTCCTTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS CAA 72 bp AGATGTGGAATGTCCTCTCGTCTCTGGCTTGGCGAATaGCCCGTGATTTTTCTAGCAGATAGGTCTCAATGT +
Preference number: 6 (lower is better)
Translates to: RCGMSSRLWLGE*PVIFLADRSQC
Trigger: ACATTGAGACCTATCTGCTAGAAAAATCACGGGCAATTCGCCAAGCCAGAGACGAGAGGACATTCCACATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000300036.6
ENST00000396324.7
ENST00000452625.7
ENST00000570785.1
ENST00000571910.2
ENST00000576790.7
ENST00000612165.4
ENST00000616422.4
ENST00000621545.2
ENST00000631759.1
ENST00000632632.1
ENST00000634050.1
ENST00000652121.1
CDS CAA 72 bp CTGAGTTCTTGCAATGATGTTCTGTTTGTATCTCGGTaGGGCTGCAAGCTGGAGACCGGTTGGCTAAATCAT +
Preference number: 6 (lower is better)
Translates to: LSSCNDVLFVSR*GCKLETGWLNH
Trigger: ATGATTTAGCCAACCGGTCTCCAGCTTGCAGCCCAACCGAGATACAAACAGAACATCATTGCAAGAACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS CAA 90 bp CATCTAGTTATTGGAGAAAGCAACCTAGGTCCTGACAGTTCTACCTaGGATGGATGTTGTCACAAAACTCTGCCCTTAACCCACAGGTTC +
Preference number: 6 (lower is better)
Translates to: HLVIGESNLGPDSST*DGCCHKTLPLTHRF
Trigger: GAACCTGTGGGTTAAGGGCAGAGTTTTGTGACAACATCCATCCAAGGTAGAACTGTCAGGACCTAGGTTGCTTTCTCCAATAACTAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS TCA 72 bp ACTGAACACAAGCCACACTCACTCATTGGGAGGAGATaGAGAACTGTTCATATGTCACTCACAGACATGGTC +
Preference number: 6 (lower is better)
Translates to: TEHKPHSLIGRR*RTVHMSLTDMV
Trigger: GACCATGTCTGTGAGTGACATATGAACAGTTCTTCATCTCCTCCCAATGAGTGAGTGTGGCTTGTGTTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571910.2
ENST00000631759.1
CDS TCA 72 bp AAGCTTGAGTTTCATTTGGGTTGTGCTTTCACCAAATaGTTGCAGCAATGCAAGAGGGGGAACCGGATGTTG +
Preference number: 6 (lower is better)
Translates to: KLEFHLGCAFTK*LQQCKRGNRML
Trigger: CAACATCCGGTTCCCCCTCTTGCATTGCTGCAATCATTTGGTGAAAGCACAACCCAAATGAAACTCAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS TCA 72 bp AGAATCAGGGAATCAGAACAGAAAGGCCCCTGTTTGTaGTTCGCGTTTGAGGTATTAGGATGCAGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: RIRESEQKGPCL*FAFEVLGCRKA
Trigger: TGCTTTCCTGCATCCTAATACCTCAAACGCGAATCACAAACAGGGGCCTTTCTGTTCTGATTCCCTGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651659.1
CDS CAA 72 bp ATCTGTGCAACATCACTGCCACTCAAAGCCACTGCCTaGCACAATGTCGGTGATGTCATTTACATCATGATG +
Preference number: 6 (lower is better)
Translates to: ICATSLPLKATA*HNVGDVIYIMM
Trigger: CATCATGATGTAAATGACATCACCGACATTGTGCAAGGCAGTGGCTTTGAGTGGCAGTGATGTTGCACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS CAA 72 bp AAACCTTGCAAAATAAGGATTTTTGGAGCTATGTGCTaGAGTGAACAAGAGGGTCGGGTCCAATGGAGGTGT +
Preference number: 6 (lower is better)
Translates to: KPCKIRIFGAMC*SEQEGRVQWRC
Trigger: ACACCTCCATTGGACCCGACCCTCTTGTTCACTCAAGCACATAGCTCCAAAAATCCTTATTTTGCAAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000571275.1
ENST00000576164.6
ENST00000631693.1
ENST00000633845.1
CDS CAA 72 bp CATACCGTGTCATCATCTGTTTATTTGAGGGATTCTTaGACAACTACATGCTCTTCCACAGGTCTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: HTVSSSVYLRDS*TTTCSSTGLEA
Trigger: AGCTTCCAGACCTGTGGAAGAGCATGTAGTTGTCAAAGAATCCCTCAAATAAACAGATGATGACACGGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS TCA 72 bp TTCACATCTAGTTATTGGAGAAAGCAACCTAGGTCCTaGCAGTTCTACCTTGGATGGATGTTGTCACAAAAC +
Preference number: 6 (lower is better)
Translates to: FTSSYWRKQPRS*QFYLGWMLSQN
Trigger: GTTTTGTGACAACATCCATCCAAGGTAGAACTGTCAGGACCTAGGTTGCTTTCTCCAATAACTAGATGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570785.1
ENST00000632632.1
CDS TCA 72 bp AAAACACATGGGCTAGTACTTGAGGTGTTCACTGATTaGGAAAATACCCGTGAGGTATGGGACTCTGATAAA +
Preference number: 6 (lower is better)
Translates to: KTHGLVLEVFTD*ENTREVWDSDK
Trigger: TTTATCAGAGTCCCATACCTCACGGGTATTTTCTCAATCAGTGAACACCTCAAGTACTAGCCCATGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571275.1
ENST00000633845.1
CDS CAA 72 bp CAAGCTCTTAGTCATACCGTGTCATCATCTGTTTATTaGAGGGATTCTTTGACAACTACATGCTCTTCCACA +
Preference number: 6 (lower is better)
Translates to: QALSHTVSSSVY*RDSLTTTCSST
Trigger: TGTGGAAGAGCATGTAGTTGTCAAAGAATCCCTCAAATAAACAGATGATGACACGGTATGACTAAGAGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571505.1
ENST00000633799.1
CDS GCA 72 bp GTAAAACATGTTCACAGATCAATTTCATTCGGCTTTTaGAATGACCGTAGTCCATCATGGCTATCCCTATTT +
Preference number: 6 (lower is better)
Translates to: VKHVHRSISFGF*NDRSPSWLSLF
Trigger: AAATAGGGATAGCCATGATGGACTACGGTCATTGCAAAAGCCGAATGAAATTGATCTGTGAACATGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631759.1