Pregenerated sensors for MYF6 (Homo sapiens)
Ensembl gene IDs: ENSG00000111046Ensembl transcript IDs: ENST00000228641.4
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGAGCATGCACAACAGATTTCGCAATTTTCGCAACGTTTCTTTGTaGATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: LSMHNRFRNFRNVSL*MCLLPFQQLFGLGS Trigger: GGAACCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGAAAATTGCGAAATCTGTTGTGCATGCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCCGAAAGGCGTTTTCATTTGAGCATGCACAACAGATTTCGCAATTTTCGGCCAGGAAGGGTCGGTaGGATCTTCCTGCTGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: QSRKAFSFEHAQQISQFSARKGR*DLPAAW Trigger: CCACGCAGCAGGAAGATCCCACCGACCCTTCCTGGC...CGAAAATTGCGAAATCTGTTGTGCATGCTCAAATGAAAACGCCTTTCGGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| 3UTR-3UTR GCA 90 bp | CAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGTCGGTGGGATCTTCCTaGTGCGTGGAGAAGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: QRFFVNVSPSLSATFRSGSVGSS*CVEKVS Trigger: TGAGACCTTCTCCACGCAGCAGGAAGATCCCACCGA...CCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| 3UTR TCA 72 bp | CACAACAGATTTCGCAATTTTCGCAACGTTTCTTTGTaGATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGT | + |
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Preference number: 3 (lower is better) Translates to: HNRFRNFRNVSL*MCLLPFQQLFG Trigger: ACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGAAAATTGCGAAATCTGTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | GAAGGGTCGGTGGGATCTTCCTGCTGCGTGGAGAAGGTCTCAAGCGCAGGCTCAGCCCAGATCAGACACTaGCCGGGGCAGTGTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: EGSVGSSCCVEKVSSAGSAQIRH*PGQCGG Trigger: GCCTCCACACTGCCCCGGCCAGTGTCTGATCTGGGC...TGAGCCTGCGCTTGAGACCTTCTCCACGCAGCAGGAAGATCCCACCGACCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR GCA 90 bp | GGATTAGGCCAGGAAGGGTCGGTGGGATCTTCCTGCTGCGTGGAGAAGGTCTCACATGTTCCTCTCCGCTaGTGTCGCTCCCCGCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: GLGQEGSVGSSCCVEKVSHVPLR*CRSPLP Trigger: CGGAAGCGGGGAGCGACAGCAGCGGAGAGGAACATG...TGAGACCTTCTCCACGCAGCAGGAAGATCCCACCGACCCTTCCTGGCCTAATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | AGGATTAGGCCAGGAAGGGTCGGTGGGATCTTCCTGCTGCGTGGAGAAGGTCTCTGGGCAGCCTCTGGTTaGGGTTGGCCACAGTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: RIRPGRVGGIFLLRGEGLWAASG*GWPQFA Trigger: GGCGAACTGTGGCCAACCCCAACCAGAGGCTGCCCA...GAGACCTTCTCCACGCAGCAGGAAGATCCCACCGACCCTTCCTGGCCTAATCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | GAAGGGTCGGTGGGATCTTCCTGCTGCGTGGAGAAGGTCTCAAGCGCAGGCTCAGAAACACTTGGCCACTaGGAGCTGCAGGTGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: EGSVGSSCCVEKVSSAGSETLGH*ELQVRR Trigger: CCTGCGCACCTGCAGCTCCCAGTGGCCAAGTGTTTC...TGAGCCTGCGCTTGAGACCTTCTCCACGCAGCAGGAAGATCCCACCGACCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR GCA 90 bp | CAGGAAGGGTCGGTGGGATCTTCCTGCTGCGTGGAGAAGGTCTCAAGCGCAGGCAGTTCGCCGCTTCAGTaGCTCGAAGGCCTCGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: QEGSVGSSCCVEKVSSAGSSPLQ*LEGLVD Trigger: ATCAACGAGGCCTTCGAGGCACTGAAGCGGCGAACT...GCCTGCGCTTGAGACCTTCTCCACGCAGCAGGAAGATCCCACCGACCCTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR GCA 90 bp | GAAGGGTCGGTGGGATCTTCCTGCTGCGTGGAGAAGGTCTCAAGCGCAGGCTCATCGGTGGGATCTTCCTaGTGCGTGGAGAAGGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: EGSVGSSCCVEKVSSAGSSVGSS*CVEKVS Trigger: TGAGACCTTCTCCACGCAGCAGGAAGATCCCACCGA...TGAGCCTGCGCTTGAGACCTTCTCCACGCAGCAGGAAGATCCCACCGACCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR GCA 90 bp | GGATTAGGCCAGGAAGGGTCGGTGGGATCTTCCTGCTGCGTGGAGAAGGTCTCAGCCACTTCTAATGGCTaGAGAGTAACATTTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GLGQEGSVGSSCCVEKVSATSNG*RVTFSP Trigger: TGGGGAAAATGTTACTCTGCAGCCATTAGAAGTGGC...TGAGACCTTCTCCACGCAGCAGGAAGATCCCACCGACCCTTCCTGGCCTAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | CAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGTCCTTTCGCGCAGGGTaGCGGCTTTTCGCCGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: QRFFVNVSPSLSATFRSGSFRAG*RLFAGQ Trigger: CTGACCGGCGAAAAGCCGCCACCCTGCGCGAAAGGA...CCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR TCA 90 bp | CGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGTTCTGCATCTTCTCCTGCTaGTCCAGCCGGTGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RFFVNVSPSLSATFRSGFCIFSC*SSRCSR Trigger: CCTGCTGCACCGGCTGGATCAGCAGGAGAAGATGCA...GAACCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | CAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGGCCTCTGGTTGGGGTTaGCCACAGTTCGCCGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QRFFVNVSPSLSATFRSGASGWG*PQFAAS Trigger: TGAAGCGGCGAACTGTGGCCAACCCCAACCAGAGGC...CCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR TCA 90 bp | TTCGCAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCGTTTGGGTCTGTAGCTaGAGGGGTCCACCCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FATFLCECVSFPFSNFSVVWVCS*RGPPPA Trigger: AGCTGGGGGTGGACCCCTTCAGCTACAGACCCAAAC...GACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR TCA 90 bp | GGATTAGGCCAGGAAGGGTCGGTGGGATCTTCCTGCTGCGTGGAGAAGGTCTCACACTTTAGACAGGAATaGACTTCTTTTGAACATGGC | + |
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Preference number: 4 (lower is better) Translates to: GLGQEGSVGSSCCVEKVSHFRQE*TSFEHG Trigger: GCCATGTTCAAAAGAAGTTCATTCCTGTCTAAAGTG...TGAGACCTTCTCCACGCAGCAGGAAGATCCCACCGACCCTTCCTGGCCTAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | CAAAGCCGAAAGGCGTTTTCATTTGAGCATGCACAACAGATTTCGCAATTTTCGGCTTCCGGGGGCATTTaGTCCTGGCAGGGGGACAAG | + |
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Preference number: 4 (lower is better) Translates to: QSRKAFSFEHAQQISQFSASGGI*SWQGDK Trigger: CTTGTCCCCCTGCCAGGACCAAATGCCCCCGGAAGC...CGAAAATTGCGAAATCTGTTGTGCATGCTCAAATGAAAACGCCTTTCGGCTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | GCATGCACAACAGATTTCGCAATTTTCGCAACGTTTCTTTGTGAATGTGTCTCCGCCAGGAAGGGTCGGTaGGATCTTCCTGCTGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: ACTTDFAIFATFLCECVSARKGR*DLPAAW Trigger: CCACGCAGCAGGAAGATCCCACCGACCCTTCCTGGC...GGAGACACATTCACAAAGAAACGTTGCGAAAATTGCGAAATCTGTTGTGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR TCA 90 bp | TGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGTTCCTAAATGTCTCCTCCTTGGCCTCTaGCTCGATCTGAACTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: CECVSFPFSNFSVWVPKCLLLGL*LDLNWV Trigger: CACCCAGTTCAGATCGAGTCAGAGGCCAAGGAGGAG...ACATTTAGGAACCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR TCA 90 bp | TTCGCAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCACGAGCCCCCTGGAATaGTCGGAAACACTTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FATFLCECVSFPFSNFSVTSPLE*SETLGH Trigger: GTGGCCAAGTGTTTCCGATCATTCCAGGGGGCTCGT...GACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR GCA 90 bp | CAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGCCACGCAGGGGAGTTTaGGTTCCTCCGAGGAAATAC | + |
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Preference number: 4 (lower is better) Translates to: QRFFVNVSPSLSATFRSGPRRGV*VPPRKY Trigger: GTATTTCCTCGGAGGAACGCAAACTCCCCTGCGTGG...CCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | CGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGTTCGATCTTCCTGCTGCGTaGAGAAGGTCTCAAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: RFFVNVSPSLSATFRSGFDLPAA*RRSQAQ Trigger: CTGCGCTTGAGACCTTCTCCACGCAGCAGGAAGATC...GAACCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR TCA 90 bp | TCGCAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGCCGCTCAATATAGCTaGTGGCGCTCCGCAGAATCT | + |
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Preference number: 4 (lower is better) Translates to: SQRFFVNVSPSLSATFRSAAQYS*WRSAES Trigger: AGATTCTGCGGAGCGCCATCAGCTATATTGAGCGGC...AGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | AATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGTTCCTAAATGTTAATGGGGGCATTTGGTCCTaGCAGGGGGACAAGGTACCA | + |
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Preference number: 4 (lower is better) Translates to: NVSPSLSATFRSGFLNVNGGIWS*QGDKVP Trigger: TGGTACCTTGTCCCCCTGCCAGGACCAAATGCCCCC...ATTAACATTTAGGAACCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR TCA 90 bp | TCGCAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTCCTCGAAGGCCTCGTTaGTTTTCTTTAGCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SQRFFVNVSPSLSATFRSPRRPR*FSLASS Trigger: GGAGGAGGCTAAAGAAAATCAACGAGGCCTTCGAGG...AGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR GCA 90 bp | CAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGGGGCAGATTTTCTCTTaGAGGTCTTGCAAGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: QRFFVNVSPSLSATFRSGGQIFS*RSCKPR Trigger: TCTGGGCTTGCAAGACCTGCAAGAGAAAATCTGCCC...CCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | TGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGTTCCTAAATGTGGTACCATCACTCCCTaGATACAAAGGAGAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CECVSFPFSNFSVWVPKCGTITP*IQRRAF Trigger: GAAGGCTCTCCTTTGTATCCAGGGAGTGATGGTACC...ACATTTAGGAACCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR GCA 90 bp | TTCGCAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTTCTCTTGCAGGTCTTaGAAGCCCAGATCAGACACT | + |
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Preference number: 4 (lower is better) Translates to: FATFLCECVSFPFSNFSVFSCRS*KPRSDT Trigger: AGTGTCTGATCTGGGCTTGCAAGACCTGCAAGAGAA...GACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR TCA 90 bp | AATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGTTCCTAAATGTTAATAAGGCTACTCGAGGCTaGCGAATCAATACTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NVSPSLSATFRSGFLNVNKATRG*RINTCS Trigger: GGAGCAAGTATTGATTCGTCAGCCTCGAGTAGCCTT...ATTAACATTTAGGAACCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | CAAAGCCGAAAGGCGTTTTCATTTGAGCATGCACAACAGATTTCGCAATTTTCGTTATCACGAGCCCCCTaGAATGATCGGAAACACTTG | + |
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Preference number: 4 (lower is better) Translates to: QSRKAFSFEHAQQISQFSLSRAP*NDRKHL Trigger: CAAGTGTTTCCGATCATTCCAGGGGGCTCGTGATAA...CGAAAATTGCGAAATCTGTTGTGCATGCTCAAATGAAAACGCCTTTCGGCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | TCGCAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTAAATACTGTCCACGATaGAAGAAAGGCATCGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SQRFFVNVSPSLSATFRSKYCPR*KKGIEG Trigger: GCCTTCGATGCCTTTCTTCCATCGTGGACAGTATTT...AGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | TCATTTGAGCATGCACAACAGATTTCGCAATTTTCGCAACGTTTCTTTGTGAATATGATCGGAAACACTTaGCCACTGGGAGCTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SFEHAQQISQFSQRFFVNMIGNT*PLGAAG Trigger: ACCTGCAGCTCCCAGTGGCCAAGTGTTTCCGATCAT...ATTCACAAAGAAACGTTGCGAAAATTGCGAAATCTGTTGTGCATGCTCAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR TCA 90 bp | TTCGCAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCAAAGGCGTTTTCATTTaGGCATGCACAACAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: FATFLCECVSFPFSNFSVKGVFI*ACTTDF Trigger: GAAATCTGTTGTGCATGCTCAAATGAAAACGCCTTT...GACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CCA 90 bp | TCATTTGAGCATGCACAACAGATTTCGCAATTTTCGCAACGTTTCTTTGTGAATTCATGTTCTCCTCCTTaGCCTCTGACTCGATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SFEHAQQISQFSQRFFVNSCSPP*PLTRSE Trigger: TTCAGATCGAGTCAGAGGCCAAGGAGGAGAACATGA...ATTCACAAAGAAACGTTGCGAAAATTGCGAAATCTGTTGTGCATGCTCAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR TCA 90 bp | ACAGATTTCGCAATTTTCGCAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCGGAATGAACTTCTTTTaGACATGGCACAAAAGGATC | + |
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Preference number: 4 (lower is better) Translates to: TDFAIFATFLCECVSFPFGMNFF*TWHKRI Trigger: GATCCTTTTGTGCCATGTTCAAAAGAAGTTCATTCC...GAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGAAAATTGCGAAATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR GCA 90 bp | TCATTTGAGCATGCACAACAGATTTCGCAATTTTCGCAACGTTTCTTTGTGAATACCCCTAACATTAAATaGAACTTTCCCACTTTAGAC | + |
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Preference number: 4 (lower is better) Translates to: SFEHAQQISQFSQRFFVNTPNIK*NFPTLD Trigger: GTCTAAAGTGGGAAAGTTGCATTTAATGTTAGGGGT...ATTCACAAAGAAACGTTGCGAAAATTGCGAAATCTGTTGTGCATGCTCAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CAA 90 bp | CAGGAAGGGTCGGTGGGATCTTCCTGCTGCGTGGAGAAGGTCTCAAGCGCAGGCAGCCTCTGGTTGGGGTaGGCCACAGTTCGCCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: QEGSVGSSCCVEKVSSAGSLWLG*ATVRRF Trigger: GAAGCGGCGAACTGTGGCCAACCCCAACCAGAGGCT...GCCTGCGCTTGAGACCTTCTCCACGCAGCAGGAAGATCCCACCGACCCTTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS CCA 90 bp | TTCCTTAGCCGTTATCACGAGCCCCCTGGAATGATCGGAAACACTTaGCCACTGGGAGCTGCAGGTGCGCAGGAAATCCGCACCCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: FLSRYHEPPGMIGNT*PLGAAGAQEIRTLK Trigger: CTTGAGGGTGCGGATTTCCTGCGCACCTGCAGCTCCCAGTGGCCAAGTGTTTCCGATCATTCCAGGGGGCTCGTGATAACGGCTAAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS TCA 90 bp | ATACTTGCTCCTCCTTCCTTAGCCGTTATCACGAGCCCCCTGGAATaGTCGGAAACACTTGGCCACTGGGAGCTGCAGGTGCGCAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: ILAPPSLAVITSPLE*SETLGHWELQVRRK Trigger: TTTCCTGCGCACCTGCAGCTCCCAGTGGCCAAGTGTTTCCGATCATTCCAGGGGGCTCGTGATAACGGCTAAGGAAGGAGGAGCAAGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS CCA 90 bp | CCACGCAGGGGAGTTTGCGTTCCTCCGAGGAAATACTGTCCACGATaGAAGAAAGGCATCGAAGGCTACTCGAGGCTGACGAATCAATAC | + |
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Preference number: 5 (lower is better) Translates to: PRRGVCVPPRKYCPR*KKGIEGYSRLTNQY Trigger: GTATTGATTCGTCAGCCTCGAGTAGCCTTCGATGCCTTTCTTCCATCGTGGACAGTATTTCCTCGGAGGAACGCAAACTCCCCTGCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CAA 90 bp | TCGCAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTTTGGGCAGCCTCTGGTaGGGGTTGGCCACAGTTCGC | + |
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Preference number: 5 (lower is better) Translates to: SQRFFVNVSPSLSATFRSLGSLW*GLATVR Trigger: GCGAACTGTGGCCAACCCCAACCAGAGGCTGCCCAA...AGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CAA 90 bp | CGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGTTCGGGGCAGATTTTCTCTaGCAGGTCTTGCAAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RFFVNVSPSLSATFRSGFGADFL*QVLQAQ Trigger: CTGGGCTTGCAAGACCTGCAAGAGAAAATCTGCCCC...GAACCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS TCA 90 bp | GCCAGTTTCAAAAAGGTCCATCATCATGTTCTCCTCCTTGGCCTCTaGCTCGATCTGAACTGGGTGATGGACTCAAAAACCCAGAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: ASFKKVHHHVLLLGL*LDLNWVMDSKTQRN Trigger: GTTCCTCTGGGTTTTTGAGTCCATCACCCAGTTCAGATCGAGTCAGAGGCCAAGGAGGAGAACATGATGATGGACCTTTTTGAAACTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS TCA 90 bp | AATACTGTCCACGATGGAAGAAAGGCATCGAAGGCTACTCGAGGCTaGCGAATCAATACTTGCTCCTCCTTCCTTAGCCGTTATCACGAG | + |
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Preference number: 5 (lower is better) Translates to: NTVHDGRKASKATRG*RINTCSSFLSRYHE Trigger: CTCGTGATAACGGCTAAGGAAGGAGGAGCAAGTATTGATTCGTCAGCCTCGAGTAGCCTTCGATGCCTTTCTTCCATCGTGGACAGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CAA 90 bp | TCATTTGAGCATGCACAACAGATTTCGCAATTTTCGCAACGTTTCTTTGTGAATCGCTTCCGGGGGCATTaGGTCCTGGCAGGGGGACAA | + |
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Preference number: 5 (lower is better) Translates to: SFEHAQQISQFSQRFFVNRFRGH*VLAGGQ Trigger: TTGTCCCCCTGCCAGGACCAAATGCCCCCGGAAGCG...ATTCACAAAGAAACGTTGCGAAAATTGCGAAATCTGTTGTGCATGCTCAAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CAA 90 bp | TCGCAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTTCCACGCAGGGGAGTTaGCGTTCCTCCGAGGAAATA | + |
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Preference number: 5 (lower is better) Translates to: SQRFFVNVSPSLSATFRSSTQGS*RSSEEI Trigger: TATTTCCTCGGAGGAACGCAAACTCCCCTGCGTGGA...AGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS CCA 90 bp | AATAGGAGCCAGTTTCAAAAAGGTCCATCATCATGTTCTCCTCCTTaGCCTCTGACTCGATCTGAACTGGGTGATGGACTCAAAAACCCA | + |
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Preference number: 5 (lower is better) Translates to: NRSQFQKGPSSCSPP*PLTRSELGDGLKNP Trigger: TGGGTTTTTGAGTCCATCACCCAGTTCAGATCGAGTCAGAGGCCAAGGAGGAGAACATGATGATGGACCTTTTTGAAACTGGCTCCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CAA 90 bp | TGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCTGGGTTCCTAAATGTTTTCTCTTGCAGGTCTaGCAAGCCCAGATCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: CECVSFPFSNFSVWVPKCFLLQV*QAQIRH Trigger: GTGTCTGATCTGGGCTTGCAAGACCTGCAAGAGAAA...ACATTTAGGAACCCAGACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CAA 90 bp | CAAAGCCGAAAGGCGTTTTCATTTGAGCATGCACAACAGATTTCGCAATTTTCGGCCTCGAAGGCCTCGTaGATTTTCTTTAGCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: QSRKAFSFEHAQQISQFSASKAS*IFFSLL Trigger: GAGGAGGCTAAAGAAAATCAACGAGGCCTTCGAGGC...CGAAAATTGCGAAATCTGTTGTGCATGCTCAAATGAAAACGCCTTTCGGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CAA 90 bp | TCATTTGAGCATGCACAACAGATTTCGCAATTTTCGCAACGTTTCTTTGTGAATAATGATCGGAAACACTaGGCCACTGGGAGCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SFEHAQQISQFSQRFFVNNDRKH*ATGSCR Trigger: CCTGCAGCTCCCAGTGGCCAAGTGTTTCCGATCATT...ATTCACAAAGAAACGTTGCGAAAATTGCGAAATCTGTTGTGCATGCTCAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS-3UTR CAA 90 bp | TTCGCAACGTTTCTTTGTGAATGTGTCTCCTTCCCTTTCAGCAACTTTTCGGTCGAAAGGCGTTTTCATTaGAGCATGCACAACAGATTT | + |
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Preference number: 5 (lower is better) Translates to: FATFLCECVSFPFSNFSVERRFH*SMHNRF Trigger: AAATCTGTTGTGCATGCTCAAATGAAAACGCCTTTC...GACCGAAAAGTTGCTGAAAGGGAAGGAGACACATTCACAAAGAAACGTTGCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS CCA 72 bp | CGTTATCACGAGCCCCCTGGAATGATCGGAAACACTTaGCCACTGGGAGCTGCAGGTGCGCAGGAAATCCGC | + |
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Preference number: 6 (lower is better) Translates to: RYHEPPGMIGNT*PLGAAGAQEIR Trigger: GCGGATTTCCTGCGCACCTGCAGCTCCCAGTGGCCAAGTGTTTCCGATCATTCCAGGGGGCTCGTGATAACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS CAA 72 bp | CCGTTATCACGAGCCCCCTGGAATGATCGGAAACACTaGGCCACTGGGAGCTGCAGGTGCGCAGGAAATCCG | + |
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Preference number: 6 (lower is better) Translates to: PLSRAPWNDRKH*ATGSCRCAGNP Trigger: CGGATTTCCTGCGCACCTGCAGCTCCCAGTGGCCAAGTGTTTCCGATCATTCCAGGGGGCTCGTGATAACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS GCA 72 bp | AAAGGATTAGGCCAGGAAGGGTCGGTGGGATCTTCCTaGTGCGTGGAGAAGGTCTCAAGCGCAGGCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: KGLGQEGSVGSS*CVEKVSSAGSV Trigger: AACTGAGCCTGCGCTTGAGACCTTCTCCACGCAGCAGGAAGATCCCACCGACCCTTCCTGGCCTAATCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS GCA 72 bp | GTTACTTCTCCACCACTTCCTCCACGCAGGGGAGTTTaGGTTCCTCCGAGGAAATACTGTCCACGATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: VTSPPLPPRRGV*VPPRKYCPRWK Trigger: CTTCCATCGTGGACAGTATTTCCTCGGAGGAACGCAAACTCCCCTGCGTGGAGGAAGTGGTGGAGAAGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS CCA 72 bp | GGAGTTTGCGTTCCTCCGAGGAAATACTGTCCACGATaGAAGAAAGGCATCGAAGGCTACTCGAGGCTGACG | + |
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Preference number: 6 (lower is better) Translates to: GVCVPPRKYCPR*KKGIEGYSRLT Trigger: CGTCAGCCTCGAGTAGCCTTCGATGCCTTTCTTCCATCGTGGACAGTATTTCCTCGGAGGAACGCAAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS CAA 72 bp | AGTTACTTCTCCACCACTTCCTCCACGCAGGGGAGTTaGCGTTCCTCCGAGGAAATACTGTCCACGATGGAA | + |
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Preference number: 6 (lower is better) Translates to: SYFSTTSSTQGS*RSSEEILSTME Trigger: TTCCATCGTGGACAGTATTTCCTCGGAGGAACGCAAACTCCCCTGCGTGGAGGAAGTGGTGGAGAAGTAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS TCA 72 bp | CACGATGGAAGAAAGGCATCGAAGGCTACTCGAGGCTaGCGAATCAATACTTGCTCCTCCTTCCTTAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: HDGRKASKATRG*RINTCSSFLSR Trigger: ACGGCTAAGGAAGGAGGAGCAAGTATTGATTCGTCAGCCTCGAGTAGCCTTCGATGCCTTTCTTCCATCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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| CDS TCA 72 bp | AAAAAGGTCCATCATCATGTTCTCCTCCTTGGCCTCTaGCTCGATCTGAACTGGGTGATGGACTCAAAAACC | + |
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Preference number: 6 (lower is better) Translates to: KKVHHHVLLLGL*LDLNWVMDSKT Trigger: GGTTTTTGAGTCCATCACCCAGTTCAGATCGAGTCAGAGGCCAAGGAGGAGAACATGATGATGGACCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000228641.4 |
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