Pregenerated sensors for MYCNUT (Homo sapiens)
Ensembl gene IDs: ENSG00000223850Ensembl transcript IDs: ENST00000433810.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGGCGACCACAGAACTCAGCCAGAGGCAGCTGTGTGTGCTTTGGTaGTCAAGCCTTCAGGGGTCCAAGGCTGCTGGGGTGGCCACCACG | + |
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Preference number: 5 (lower is better) Translates to: QATTELSQRQLCVLW*SSLQGSKAAGVATT Trigger: CGTGGTGGCCACCCCAGCAGCCTTGGACCCCTGAAGGCTTGAGCACCAAAGCACACACAGCTGCCTCTGGCTGAGTTCTGTGGTCGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CCA 90 bp | GTGCAGGCGACCACAGAACTCAGCCAGAGGCAGCTGTGTGTGCTTTaGTGCTCAAGCCTTCAGGGGTCCAAGGCTGCTGGGGTGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: VQATTELSQRQLCVL*CSSLQGSKAAGVAT Trigger: GGTGGCCACCCCAGCAGCCTTGGACCCCTGAAGGCTTGAGCACCAAAGCACACACAGCTGCCTCTGGCTGAGTTCTGTGGTCGCCTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS GCA 90 bp | TCCACTCTTCATGATCCATCCTCCGGGGGAAGCAGGTGGAGGGGGTaGAGGCGACCACAGAACTCAGCCAGAGGCAGCTGTGTGTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: STLHDPSSGGSRWRG*RRPQNSARGSCVCF Trigger: AAAGCACACACAGCTGCCTCTGGCTGAGTTCTGTGGTCGCCTGCACCCCCTCCACCTGCTTCCCCCGGAGGATGGATCATGAAGAGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS GCA 90 bp | AGGAGAAACAACAACACCTTCCCTGCCTGGGGAAACTCCTACTCATaGTATCCGTCTCAGACAGCAGCTCCTCTGCGAAGCCATCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: RRNNNTFPAWGNSYS*YPSQTAAPLRSHLP Trigger: TGGAAGATGGCTTCGCAGAGGAGCTGCTGTCTGAGACGGATAGCATGAGTAGGAGTTTCCCCAGGCAGGGAAGGTGTTGTTGTTTCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CCA 90 bp | GCCACCACGCTGGTGCTTAGACTCCTACTGGGGTCTAGAGGACGATaGATCCCAGATCAAGTTGCTTGTTGCCTCATTTGTCAAGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: ATTLVLRLLLGSRGR*IPDQVACCLICQVL Trigger: CAGAACTTGACAAATGAGGCAACAAGCAACTTGATCTGGGATCCATCGTCCTCTAGACCCCAGTAGGAGTCTAAGCACCAGCGTGGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS GCA 90 bp | GACACATATGGGAATCAGTTCTGGGAGCACAGTGGTTTAAAAGGATaGAGACCACCAAACATCAGAAGAAGAGAAGTCAGGGTAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: DTYGNQFWEHSGLKG*RPPNIRRREVRVGK Trigger: CTTCCCTACCCTGACTTCTCTTCTTCTGATGTTTGGTGGTCTGCATCCTTTTAAACCACTGTGCTCCCAGAACTGATTCCCATATGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CCA 90 bp | CGATCTCCTTGCCTATTTGGTATTTTCCAGTATGGCAGACACATATaGGAATCAGTTCTGGGAGCACAGTGGTTTAAAAGGATGCAGACC | + |
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Preference number: 5 (lower is better) Translates to: RSPCLFGIFQYGRHI*ESVLGAQWFKRMQT Trigger: GGTCTGCATCCTTTTAAACCACTGTGCTCCCAGAACTGATTCCCATATGTGTCTGCCATACTGGAAAATACCAAATAGGCAAGGAGATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS TCA 90 bp | TCTGCGTTCTCTCTTGCCTCTATTAAGGTGTTCAGCAGACAGTATTaGAACGATCTCCTTGCCTATTTGGTATTTTCCAGTATGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: SAFSLASIKVFSRQY*NDLLAYLVFSSMAD Trigger: GTCTGCCATACTGGAAAATACCAAATAGGCAAGGAGATCGTTTCAATACTGTCTGCTGAACACCTTAATAGAGGCAAGAGAGAACGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CCA 90 bp | TATTTGGTATTTTCCAGTATGGCAGACACATATGGGAATCAGTTCTaGGAGCACAGTGGTTTAAAAGGATGCAGACCACCAAACATCAGA | + |
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Preference number: 5 (lower is better) Translates to: YLVFSSMADTYGNQF*EHSGLKGCRPPNIR Trigger: TCTGATGTTTGGTGGTCTGCATCCTTTTAAACCACTGTGCTCCCAGAACTGATTCCCATATGTGTCTGCCATACTGGAAAATACCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CAA 90 bp | GGTGCAGGCGACCACAGAACTCAGCCAGAGGCAGCTGTGTGTGCTTaGGTGCTCAAGCCTTCAGGGGTCCAAGGCTGCTGGGGTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: GAGDHRTQPEAAVCA*VLKPSGVQGCWGGH Trigger: GTGGCCACCCCAGCAGCCTTGGACCCCTGAAGGCTTGAGCACCAAAGCACACACAGCTGCCTCTGGCTGAGTTCTGTGGTCGCCTGCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS GCA 72 bp | ACAGAACTCAGCCAGAGGCAGCTGTGTGTGCTTTGGTaGTCAAGCCTTCAGGGGTCCAAGGCTGCTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: TELSQRQLCVLW*SSLQGSKAAGV Trigger: CACCCCAGCAGCCTTGGACCCCTGAAGGCTTGAGCACCAAAGCACACACAGCTGCCTCTGGCTGAGTTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS GCA 72 bp | AGGCGACCACAGAACTCAGCCAGAGGCAGCTGTGTGTaGTTTGGTGCTCAAGCCTTCAGGGGTCCAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RRPQNSARGSCV*FGAQAFRGPRL Trigger: CAGCCTTGGACCCCTGAAGGCTTGAGCACCAAAGCACACACAGCTGCCTCTGGCTGAGTTCTGTGGTCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CCA 72 bp | ACCACAGAACTCAGCCAGAGGCAGCTGTGTGTGCTTTaGTGCTCAAGCCTTCAGGGGTCCAAGGCTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TTELSQRQLCVL*CSSLQGSKAAG Trigger: CCCAGCAGCCTTGGACCCCTGAAGGCTTGAGCACCAAAGCACACACAGCTGCCTCTGGCTGAGTTCTGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CAA 72 bp | GGAAACCTGTGCCCCATGAGCGGACTGAGGGTTGAGTaGGTCCCGGACGTTGCTGTGTCTCGGTGTGATTAC | + |
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Preference number: 6 (lower is better) Translates to: GNLCPMSGLRVE*VPDVAVSRCDY Trigger: GTAATCACACCGAGACACAGCAACGTCCGGGACCAACTCAACCCTCAGTCCGCTCATGGGGCACAGGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS GCA 72 bp | AACAACACCTTCCCTGCCTGGGGAAACTCCTACTCATaGTATCCGTCTCAGACAGCAGCTCCTCTGCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: NNTFPAWGNSYS*YPSQTAAPLRS Trigger: GCTTCGCAGAGGAGCTGCTGTCTGAGACGGATAGCATGAGTAGGAGTTTCCCCAGGCAGGGAAGGTGTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS GCA 72 bp | CCTACTCATGCTATCCGTCTCAGACAGCAGCTCCTCTaGGAAGCCATCTTCCACTCTCTCAGAAAGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PTHAIRLRQQLL*EAIFHSLRKSP Trigger: TGGACTCTTTCTGAGAGAGTGGAAGATGGCTTCGCAGAGGAGCTGCTGTCTGAGACGGATAGCATGAGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS GCA 72 bp | TGGGAGCAGGGGCCTCACATACACTGTTGGTGTGCCTaGCCCAAGAGGAAAAGCAATTCCACTCTTCATGAT | + |
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Preference number: 6 (lower is better) Translates to: WEQGPHIHCWCA*PKRKSNSTLHD Trigger: ATCATGAAGAGTGGAATTGCTTTTCCTCTTGGGGCAGGCACACCAACAGTGTATGTGAGGCCCCTGCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CCA 72 bp | CTGGTGCTTAGACTCCTACTGGGGTCTAGAGGACGATaGATCCCAGATCAAGTTGCTTGTTGCCTCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: LVLRLLLGSRGR*IPDQVACCLIC Trigger: ACAAATGAGGCAACAAGCAACTTGATCTGGGATCCATCGTCCTCTAGACCCCAGTAGGAGTCTAAGCACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CAA 72 bp | TACTGGGGTCTAGAGGACGATGGATCCCAGATCAAGTaGCTTGTTGCCTCATTTGTCAAGTTCTGCCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: YWGLEDDGSQIK*LVASFVKFCLY Trigger: GTACAGGCAGAACTTGACAAATGAGGCAACAAGCAACTTGATCTGGGATCCATCGTCCTCTAGACCCCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CAA 72 bp | ACGATGGATCCCAGATCAAGTTGCTTGTTGCCTCATTaGTCAAGTTCTGCCTGTACATCGGCTGTTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: TMDPRSSCLLPH*SSSACTSAVLP Trigger: AGGAAGAACAGCCGATGTACAGGCAGAACTTGACAAATGAGGCAACAAGCAACTTGATCTGGGATCCATCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CCA 72 bp | TTTTCCAGTATGGCAGACACATATGGGAATCAGTTCTaGGAGCACAGTGGTTTAAAAGGATGCAGACCACCA | + |
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Preference number: 6 (lower is better) Translates to: FSSMADTYGNQF*EHSGLKGCRPP Trigger: TGGTGGTCTGCATCCTTTTAAACCACTGTGCTCCCAGAACTGATTCCCATATGTGTCTGCCATACTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CAA 90 bp | CACTCTCTCAGAAAGAGTCCATTGTTTCTTCCTCTGCGTTCTCTCTaGCCTCTATTAAGGTGTTCAGCAGACAGTATTGAAACGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: HSLRKSPLFLPLRSL*PLLRCSADSIETIS Trigger: GGAGATCGTTTCAATACTGTCTGCTGAACACCTTAATAGAGGCAAGAGAGAACGCAGAGGAAGAAACAATGGACTCTTTCTGAGAGAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CCA 72 bp | GAAACGATCTCCTTGCCTATTTGGTATTTTCCAGTATaGCAGACACATATGGGAATCAGTTCTGGGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: ETISLPIWYFPV*QTHMGISSGST Trigger: TGTGCTCCCAGAACTGATTCCCATATGTGTCTGCCATACTGGAAAATACCAAATAGGCAAGGAGATCGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CCA 72 bp | TGCCTATTTGGTATTTTCCAGTATGGCAGACACATATaGGAATCAGTTCTGGGAGCACAGTGGTTTAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: CLFGIFQYGRHI*ESVLGAQWFKR Trigger: CCTTTTAAACCACTGTGCTCCCAGAACTGATTCCCATATGTGTCTGCCATACTGGAAAATACCAAATAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CCA 72 bp | TCAGCAGACAGTATTGAAACGATCTCCTTGCCTATTTaGTATTTTCCAGTATGGCAGACACATATGGGAATC | + |
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Preference number: 6 (lower is better) Translates to: SADSIETISLPI*YFPVWQTHMGI Trigger: GATTCCCATATGTGTCTGCCATACTGGAAAATACCAAATAGGCAAGGAGATCGTTTCAATACTGTCTGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS CAA 90 bp | TTGCCTCTATTAAGGTGTTCAGCAGACAGTATTGAAACGATCTCCTaGCCTATTTGGTATTTTCCAGTATGGCAGACACATATGGGAATC | + |
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Preference number: 6 (lower is better) Translates to: LPLLRCSADSIETIS*PIWYFPVWQTHMGI Trigger: GATTCCCATATGTGTCTGCCATACTGGAAAATACCAAATAGGCAAGGAGATCGTTTCAATACTGTCTGCTGAACACCTTAATAGAGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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| CDS TCA 72 bp | TCTCTTGCCTCTATTAAGGTGTTCAGCAGACAGTATTaGAACGATCTCCTTGCCTATTTGGTATTTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SLASIKVFSRQY*NDLLAYLVFSS Trigger: ACTGGAAAATACCAAATAGGCAAGGAGATCGTTTCAATACTGTCTGCTGAACACCTTAATAGAGGCAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433810.1 |
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