RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYBPH (Homo sapiens)

Ensembl gene IDs: ENSG00000133055

Ensembl transcript IDs: ENST00000255416.9, ENST00000621380.1

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTaGGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGC +
Preference number: 1 (lower is better)
Translates to: SASHPECNSAGHSNL*AFQHPLSPVSLAWG
Trigger: GCCCCAGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR CCA 90 bp GGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTaGAGTTTGACTGTAGGCCTGGTGGACCTGGCCCCTCAGGCCTGC +
Preference number: 1 (lower is better)
Translates to: GSISRRYGSGGLGHL*SLTVGLVDLAPQAC
Trigger: GCAGGCCTGAGGGGCCAGGTCCACCAGGCCTACAGTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR CCA 90 bp TACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTaGGCATCTCTGGAGTTTGACTGTAGGCCTGGTGGACCTGGCCCC +
Preference number: 1 (lower is better)
Translates to: YQGRFHQPSLWKRGS*ASLEFDCRPGGPGP
Trigger: GGGGCCAGGTCCACCAGGCCTACAGTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR GCA 90 bp ACTGTTAACACCACGCATCTTTATTTGAGTGCTTCCCACCCAGAGTaGAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCC +
Preference number: 1 (lower is better)
Translates to: TVNTTHLYLSASHPE*NSAGHSNLCAFQHP
Trigger: GGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATGCGTGGTGTTAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR CAA 90 bp ATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGAGTTaGACTGTAGGCCTGGTGGACCTGGCCCCTCAGGCCTGCAGCACC +
Preference number: 2 (lower is better)
Translates to: ISRRYGSGGLGHLWS*TVGLVDLAPQACST
Trigger: GGTGCTGCAGGCCTGAGGGGCCAGGTCCACCAGGCCTACAGTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR CAA 90 bp TGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTaGAGCCCAGTTAGTCTGGCCTGGGGCCTACCAGGCCCATTCCTG +
Preference number: 2 (lower is better)
Translates to: CNSAGHSNLCAFQHP*SPVSLAWGLPGPFL
Trigger: CAGGAATGGGCCTGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR-3UTR CCA 90 bp GTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCCAGGCCTGCAGCACCTaGCTCCTCATCACAGCCTCC +
Preference number: 2 (lower is better)
Translates to: VLPTQSATPQGTPISAPSQACST*LLITAS
Trigger: GGAGGCTGTGATGAGGAGCCAGGTGCTGCAGGCCTG...GGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR-3UTR CCA 90 bp TTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCAGGCCTGCAGCACCTaGCTCCTCATCACAGCCTCC +
Preference number: 2 (lower is better)
Translates to: FECFPPRVQLRRALQSLRQACST*LLITAS
Trigger: GGAGGCTGTGATGAGGAGCCAGGTGCTGCAGGCCTG...GCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR-3UTR CCA 90 bp AAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGTCTTGGGCATCTCTaGAGTTTGACTGTAGGCCTG +
Preference number: 2 (lower is better)
Translates to: KGGQQVPGAVPSAVAMEAGLGHL*SLTVGL
Trigger: CAGGCCTACAGTCAAACTCCAGAGATGCCCAAGACC...CGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR-3UTR CCA 90 bp GGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTGGAAGCGGGGGTCTTaGGCATCTCTGGAGTTTGAC +
Preference number: 2 (lower is better)
Translates to: GHSNLCAFQHPLSPVSLAWKRGS*ASLEFD
Trigger: GTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCA...GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR-3UTR CCA 90 bp TTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCATCAGCCGTCGCTATaGAAGCGGGGGTCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: FECFPPRVQLRRALQSLRHQPSL*KRGSWA
Trigger: TGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATG...GCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR-3UTR CCA 90 bp GGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCGGTCTTGGGCATCTCTaGAGTTTGACTGTAGGCCTG +
Preference number: 2 (lower is better)
Translates to: GHSNLCAFQHPLSPVSLAGLGHL*SLTVGL
Trigger: CAGGCCTACAGTCAAACTCCAGAGATGCCCAAGACC...GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR-3UTR CCA 90 bp AACACCACGCATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCCAGTTAGTCTGGCCTaGGGCCTACCAGGCCCATTC +
Preference number: 2 (lower is better)
Translates to: NTTHLYLSASHPECNSAGPVSLA*GLPGPF
Trigger: GAATGGGCCTGGTAGGCCCCAGGCCAGACTAACTGG...CCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATGCGTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR-3UTR TCA 90 bp CATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCCTTCCAGCACCCCTTaGGCCCAGTTAGTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: HLYLSASHPECNSAGHSNPSSTP*AQLVWP
Trigger: AGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGG...ATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR-3UTR CCA 90 bp CATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCCAGTTAGTCTGGCCTaGGGCCTACCAGGCCCATTC +
Preference number: 2 (lower is better)
Translates to: HLYLSASHPECNSAGHSNPVSLA*GLPGPF
Trigger: GAATGGGCCTGGTAGGCCCCAGGCCAGACTAACTGG...ATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR-3UTR TCA 90 bp TCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTTACCAGGCCCATTCCTaGGTTCTGGACACCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SLFECFPPRVQLRRALQSYQAHS*VLDTSL
Trigger: GAGGCTGGTGTCCAGAACTCAGGAATGGGCCTGGTA...AGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR TCA 72 bp CAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTaGGCCCAGTTAGTCTGGCCTGGGGCCTACCAGGCC +
Preference number: 3 (lower is better)
Translates to: QGTPISAPSSTP*AQLVWPGAYQA
Trigger: GGCCTGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR CCA 72 bp AGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTaGAGTTTGACTGTAGGCCTGGTGGACCTGGCCCCT +
Preference number: 3 (lower is better)
Translates to: SRRYGSGGLGHL*SLTVGLVDLAP
Trigger: AGGGGCCAGGTCCACCAGGCCTACAGTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR GCA 72 bp CACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTaGGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTG +
Preference number: 3 (lower is better)
Translates to: HPECNSAGHSNL*AFQHPLSPVSL
Trigger: CAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR CCA 72 bp AGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATaGAAGCGGGGGTCTTGGGCATCTCTGGAGTTTGAC +
Preference number: 3 (lower is better)
Translates to: SRYQGRFHQPSL*KRGSWASLEFD
Trigger: GTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR CCA 72 bp CGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTaGGCATCTCTGGAGTTTGACTGTAGGCCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: RFHQPSLWKRGS*ASLEFDCRPGG
Trigger: TCCACCAGGCCTACAGTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR-3UTR CAA 90 bp AACACCACGCATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGGCCTTCCAGCACCCCTaGAGCCCAGTTAGTCTGGCC +
Preference number: 3 (lower is better)
Translates to: NTTHLYLSASHPECNSAGAFQHP*SPVSLA
Trigger: GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGC...CCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATGCGTGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR GCA 72 bp ACCACGCATCTTTATTTGAGTGCTTCCCACCCAGAGTaGAACTCCGCAGGGCACTCCAATCTCTGCGCCTTC +
Preference number: 3 (lower is better)
Translates to: TTHLYLSASHPE*NSAGHSNLCAF
Trigger: GAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATGCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp GGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAATGGGCTGGTCCAGCATaGCCGGCGGGCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GKGGQQVPGAVPSAVAMEWAGPA*PAGQPL
Trigger: CAGGGGCTGGCCCGCCGGCCATGCTGGACCAGCCCA...TTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp GTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCGCAGGGGTCAGCCGTTaGGGGGCCTGGGCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: VQLRRALQSLRLPAPLEPAGVSR*GAWASR
Trigger: CCTAGAGGCCCAGGCCCCCCAACGGCTGACCCCTGC...GGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255416.9
CDS-3UTR CCA 90 bp CTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGCGGATGTGGATGGGCTaGTCCAGCATGGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LGKGGQQVPGAVPSAVAMRMWMG*SSMAGG
Trigger: CCCGCCGGCCATGCTGGACCAGCCCATCCACATCCG...CATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGCGCATGCTCACCCGCTaGCTGTCCAGGGCATGGCCG +
Preference number: 4 (lower is better)
Translates to: LGKGGQQVPGAVPSAVAMRMLTR*LSRAWP
Trigger: CGGCCATGCCCTGGACAGCCAGCGGGTGAGCATGCG...CATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp CTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGTGCGGCTGAGGCTTTaGCCTCCAGCCGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LGKGGQQVPGAVPSAVAMVRLRL*PPAGSP
Trigger: TGGACTGCCGGCTGGAGGTCAAAGCCTCAGCCGCAC...CATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCCGGCGGGCCAGCCCCTaGAGAACTCACTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: QVPGAVPSAVAMEAGVLGRRASP*RTHCRH
Trigger: GTGTCTGCAGTGAGTTCTGCAGGGGCTGGCCCGCCG...GCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TCTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATCGCATGCTCACCCGCTaGCTGTCCAGGGCATGGCCG +
Preference number: 4 (lower is better)
Translates to: SGEGRPAGTRGGSISRRYRMLTR*LSRAWP
Trigger: CGGCCATGCCCTGGACAGCCAGCGGGTGAGCATGCG...ATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp GCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCACAGCCTCCTCCCGTaGCTTCAGTGTGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AGTRGGSISRRYGSGGLGHSLLP*LQCAAE
Trigger: CTCAGCCGCACACTGAAGTCACGGGAGGAGGCTGTG...CCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCGGCCAGGGTGGAGTGTaGAGGGGTCAGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ECNSAGHSNLCAFQHPLSGQGGV*RGQPLG
Trigger: CCCCAACGGCTGACCCCTGCACACTCCACCCTGGCC...GCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255416.9
CDS-3UTR GCA 90 bp GGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCGGTCCCCGGTGCGCATaGTCACCCGCTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GHSNLCAFQHPLSPVSLAGPRCA*SPAGCP
Trigger: TGGACAGCCAGCGGGTGAGCATGCGCACCGGGGACC...GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR CAA 72 bp GCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTaGAGCCCAGTTAGTCTGGCCTGGGGCCTACCAGGC +
Preference number: 4 (lower is better)
Translates to: AGHSNLCAFQHP*SPVSLAWGLPG
Trigger: GCCTGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp CTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGAGGGGATTTGCAGGTTaGCCGTCTCTCCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LGKGGQQVPGAVPSAVAMRGFAG*PSLPPG
Trigger: GCCAGGTGGGAGAGACGGTCAACCTGCAAATCCCCT...CATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp TCTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATCTTCCACGCGCACAGTaGGCTCGTAGCGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: SGEGRPAGTRGGSISRRYLPRAQ*ARSGQS
Trigger: ACTCTGGCCGCTACGAGCTCACTGTGCGCGTGGAAG...ATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp TCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCGGTCTCCTCTGGACTaGAGGCAGGGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SAGHSNLCAFQHPLSPVSRSPLD*RQGPRR
Trigger: CCTCCGAGGGCCCTGCCTGCAGTCCAGAGGAGACCG...ACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGAGGGTGCAGACGCCTTaGTCAGAGAGGGCGCGGTAT +
Preference number: 4 (lower is better)
Translates to: LGKGGQQVPGAVPSAVAMRVQTP*SERARY
Trigger: ATACCGCGCCCTCTCTGAGCAAGGCGTCTGCACCCT...CATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCAGGGTGCAGACGCCTTaGTCAGAGAGGGCGCGGTAT +
Preference number: 4 (lower is better)
Translates to: QVPGAVPSAVAMEAGVLGRVQTP*SERARY
Trigger: ATACCGCGCCCTCTCTGAGCAAGGCGTCTGCACCCT...GCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGCTTCCCACCCAGAGTaGAACTCCGCAGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: QGRFHQPSLWKRGSWASLASHPE*NSAGHS
Trigger: GGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGC...CAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TCTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATCATTGCTGGACTGGCTaGGGGGCCAGGGTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SGEGRPAGTRGGSISRRYHCWTG*GARVEC
Trigger: ACACTCCACCCTGGCCCCCCAGCCAGTCCAGCAATG...ATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000255416.9
CDS-3UTR CCA 90 bp CTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCAAGATGCGGTCTCCTCTaGACTGCAGGCAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LCAFQHPLSPVSLAWGLPRCGLL*TAGRAL
Trigger: GAGGGCCCTGCCTGCAGTCCAGAGGAGACCGCATCT...TGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp GGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAAGATGCGGTCTCCTCTaGACTGCAGGCAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GKGGQQVPGAVPSAVAMERCGLL*TAGRAL
Trigger: GAGGGCCCTGCCTGCAGTCCAGAGGAGACCGCATCT...TTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGCTGGGTCACCATCATaGGCCGGGCACTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: QGRFHQPSLWKRGSWASLAGSPS*AGHSQA
Trigger: TGCCTGTGAGTGCCCGGCCCATGATGGTGACCCAGC...CAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGAGTTTGACTGGGCTGGTCCAGCATaGCCGGCGGGCCAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FHQPSLWKRGSWASLEFDWAGPA*PAGQPL
Trigger: CAGGGGCTGGCCCGCCGGCCATGCTGGACCAGCCCA...GTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp GCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGAAGAGGATGGAGTCCTaGTCCCCGGTGCGCATGCTC +
Preference number: 4 (lower is better)
Translates to: AGTRGGSISRRYGSGGLGKRMES*SPVRML
Trigger: GAGCATGCGCACCGGGGACCAGGACTCCATCCTCTT...CCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCAGCCTGTGTCCTGGGGTaGCGTCCACTGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LCAFQHPLSPVSLAWGLPACVLG*RPLKSS
Trigger: GCTGCTCTTCAGTGGACGCCACCCCAGGACACAGGC...TGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp AAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGCAGGCCTGCAGCACCTaGCTCCTCATCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KGGQQVPGAVPSAVAMEAQACST*LLITAS
Trigger: GGAGGCTGTGATGAGGAGCCAGGTGCTGCAGGCCTG...CGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TCTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATCAGGCCTGCAGCACCTaGCTCCTCATCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGEGRPAGTRGGSISRRYQACST*LLITAS
Trigger: GGAGGCTGTGATGAGGAGCCAGGTGCTGCAGGCCTG...ATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGCATCAGCCGTCGCTATaGAAGCGGGGGTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGKGGQQVPGAVPSAVAMHQPSL*KRGSWA
Trigger: TGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATG...CATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
3UTR CAA 72 bp CGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGAGTTaGACTGTAGGCCTGGTGGACCTGGCCCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RYGSGGLGHLWS*TVGLVDLAPQA
Trigger: GGCCTGAGGGGCCAGGTCCACCAGGCCTACAGTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp GGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAAGGGGATTTGCAGGTTaGCCGTCTCTCCCACCTGGC +
Preference number: 4 (lower is better)
Translates to: GKGGQQVPGAVPSAVAMERGFAG*PSLPPG
Trigger: GCCAGGTGGGAGAGACGGTCAACCTGCAAATCCCCT...TTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp GTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCTGGGTCCATGTGGCCTaGGGCTTAGGCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLPTQSATPQGTPISAPSWVHVA*GLGFPW
Trigger: CCAGGGGAAGCCTAAGCCTCAGGCCACATGGACCCA...GGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp CCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGCTGGGCCGAGCGAATaGAGAGGATGGAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PAGTRGGSISRRYGSGGLAGPSE*RGWSPG
Trigger: ACCAGGACTCCATCCTCTTCATTCGCTCGGCCCAGC...AAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp CACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCAGGCCCATTCCTGAGTCTTCCACGCGCACAGTaGGCTCGTAGCGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: HPLSPVSLAWGLPGPFLSLPRAQ*ARSGQS
Trigger: ACTCTGGCCGCTACGAGCTCACTGTGCGCGTGGAAG...ACTCAGGAATGGGCCTGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp CAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGCGGTGGCCGAGGTGCTaGGTCCACACAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: QGRFHQPSLWKRGSWASLRWPRC*VHTGFL
Trigger: CAGAAAACCTGTGTGGACTCAGCACCTCGGCCACCG...CAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp GGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCCACAGCCTCCTCCCGTaGCTTCAGTGTGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GHSNLCAFQHPLSPVSLAHSLLP*LQCAAE
Trigger: CTCAGCCGCACACTGAAGTCACGGGAGGAGGCTGTG...GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp CCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTCCTTCCAGCACCCCTTaGGCCCAGTTAGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PAGTRGGSISRRYGSGGLPSSTP*AQLVWP
Trigger: AGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGG...AAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGTGCGGCTTGGGCACCTaGTCTTCTCTGGTGGACTCT +
Preference number: 4 (lower is better)
Translates to: LGKGGQQVPGAVPSAVAMCGLGT*SSLVDS
Trigger: AGAGTCCACCAGAGAAGAGCAGGTGCCCAAGCCGCA...CATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp AGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCGGCGGGCCAGCCCCTaGAGAACTCACTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: RVQLRRALQSLRLPAPLERRASP*RTHCRH
Trigger: GTGTCTGCAGTGAGTTCTGCAGGGGCTGGCCCGCCG...CTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGTTCCGCACAGTCTGCTaGGTCACCATCATGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QGRFHQPSLWKRGSWASLFRTVC*VTIMGR
Trigger: CCGGCCCATGATGGTGACCCAGCAGACTGTGCGGAA...CAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCATCTCTCGGATGTGGATaGGCTGGTCCAGCATGGCCG +
Preference number: 4 (lower is better)
Translates to: LCAFQHPLSPVSLAWGLPSLGCG*AGPAWP
Trigger: CGGCCATGCTGGACCAGCCCATCCACATCCGAGAGA...TGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp AAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGTCTCTCGGATGTGGATaGGCTGGTCCAGCATGGCCG +
Preference number: 4 (lower is better)
Translates to: KGGQQVPGAVPSAVAMEASLGCG*AGPAWP
Trigger: CGGCCATGCTGGACCAGCCCATCCACATCCGAGAGA...CGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCAGGCCCATTCCTGAGTCCAGAGTCGGAGCGCTaGGCCGAGCGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HPLSPVSLAWGLPGPFLSPESER*AERMKR
Trigger: CCTCTTCATTCGCTCGGCCCAGCGCTCCGACTCTGG...ACTCAGGAATGGGCCTGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTTGGTCAGCCAGGGGCTaGGTGAATGAGGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PAGTRGGSISRRYGSGGLWSARG*VNEGAS
Trigger: AGAAGCCCCCTCATTCACCCAGCCCCTGGCTGACCA...AAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTCCAGTTAGTCTGGCCTaGGGCCTACCAGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: PAGTRGGSISRRYGSGGLPVSLA*GLPGPF
Trigger: GAATGGGCCTGGTAGGCCCCAGGCCAGACTAACTGG...AAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp GAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCGGTGGCCGAGGTGCTaGGTCCACACAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: ECNSAGHSNLCAFQHPLSRWPRC*VHTGFL
Trigger: CAGAAAACCTGTGTGGACTCAGCACCTCGGCCACCG...GCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp GTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCTACCAGGCCCATTCCTaGGTTCTGGACACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VQLRRALQSLRLPAPLEPYQAHS*VLDTSL
Trigger: GAGGCTGGTGTCCAGAACTCAGGAATGGGCCTGGTA...GGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp AAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGTACCAGGCCCATTCCTaGGTTCTGGACACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KGGQQVPGAVPSAVAMEAYQAHS*VLDTSL
Trigger: GAGGCTGGTGTCCAGAACTCAGGAATGGGCCTGGTA...CGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp GGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCCCTTCCAGCACCCCTTaGGCCCAGTTAGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GHSNLCAFQHPLSPVSLAPSSTP*AQLVWP
Trigger: AGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGG...GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAAGGTTCCGCACAGTCTaGTGGGTCACCATCATGGGC +
Preference number: 4 (lower is better)
Translates to: GKGGQQVPGAVPSAVAMERFRTV*WVTIMG
Trigger: GCCCATGATGGTGACCCAGCAGACTGTGCGGAACCT...TTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAACCCTGCAGAACTCACTaGAGACACGCGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GKGGQQVPGAVPSAVAMEPCRTH*RHAQEE
Trigger: TTCCTCCTGCGCGTGTCTGCAGTGAGTTCTGCAGGG...TTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp TTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGAGTTTGACAGTCCTGGTCCCCGGTaGGCATGCTCACCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: FHQPSLWKRGSWASLEFDSPGPR*ACSPAG
Trigger: GCCAGCGGGTGAGCATGCGCACCGGGGACCAGGACT...GTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAATGCAGAACAACTGGGTaGTGTAGCCAGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GKGGQQVPGAVPSAVAMECRTTG*CSQGWR
Trigger: CCTCCACCCCTGGCTACAGCACCCAGTTGTTCTGCA...TTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGGGACACGGATCTTaGGGGCCTCAATGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PAGTRGGSISRRYGSGGLGGHGS*GPQCSL
Trigger: GAGAGAACATTGAGGCCCCCAAGATCCGTGTCCCCC...AAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp GGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCAAGAGGATGGAGTCCTaGTCCCCGGTGCGCATGCTC +
Preference number: 4 (lower is better)
Translates to: GHSNLCAFQHPLSPVSLAKRMES*SPVRML
Trigger: GAGCATGCGCACCGGGGACCAGGACTCCATCCTCTT...GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TCTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATTCTGCCTTCTGGATGTaGGCGAGCTCCTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: SGEGRPAGTRGGSISRRYSAFWM*ASSLVT
Trigger: CGTCACCAAGGAGCTCGCCCACATCCAGAAGGCAGA...ATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp CAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGTTCTCTGGTGGACTCTaGTACTGCCACTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: QGRFHQPSLWKRGSWASLFSGGL*YCHFSG
Trigger: CCCGGAGAAGTGGCAGTATCAGAGTCCACCAGAGAA...CAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTGCGGCTTGGGCACCTaGTCTTCTCTGGTGGACTCT +
Preference number: 4 (lower is better)
Translates to: GHSNLCAFQHPLSPVSLACGLGT*SSLVDS
Trigger: AGAGTCCACCAGAGAAGAGCAGGTGCCCAAGCCGCA...GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGATCTTCACTTGGGGGTaGAGGCTTAGTGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LGKGGQQVPGAVPSAVAMIFTWG*RLSGCG
Trigger: TCCACAGCCACTAAGCCTGCACCCCCAAGTGAAGAT...CATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTTCACTTGGGGGTaGAGGCTTAGTGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QVPGAVPSAVAMEAGVLGIFTWG*RLSGCG
Trigger: TCCACAGCCACTAAGCCTGCACCCCCAAGTGAAGAT...GCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGTCACAGTCACAGAGCTaGTGCTCACATCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGTRGGSISRRYGSGGLGSQSQS*CSHHPG
Trigger: CCCTGGATGATGTGAGCAGCAGCTCTGTGACTGTGA...CCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCTCACAGTCACAGAGCTaGTGCTCACATCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: QVPGAVPSAVAMEAGVLGSQSQS*CSHHPG
Trigger: CCCTGGATGATGTGAGCAGCAGCTCTGTGACTGTGA...GCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCCCCTGCAGAACTCACTaGAGACACGCGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VLPTQSATPQGTPISAPSPCRTH*RHAQEE
Trigger: TTCCTCCTGCGCGTGTCTGCAGTGAGTTCTGCAGGG...GGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCACTGAAGAGCAGCATTaGAGCCCCAGACGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VQLRRALQSLRLPAPLEPTEEQH*SPRRPG
Trigger: TCCTGGACGTCTGGGGCTGCAATGCTGCTCTTCAGT...GGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTGCAGAACAACTGGGTaGTGTAGCCAGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GHSNLCAFQHPLSPVSLACRTTG*CSQGWR
Trigger: CCTCCACCCCTGGCTACAGCACCCAGTTGTTCTGCA...GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTCCGGCAGTCCACAGATaGCTCCCCCAGCACATTTAT +
Preference number: 4 (lower is better)
Translates to: PAGTRGGSISRRYGSGGLPAVHR*LPQHIY
Trigger: ATAAATGTGCTGGGGGAGGCATCTGTGGACTGCCGG...AAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCGCTGGGTCACCATCATaGGCCGGGCACTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: FECFPPRVQLRRALQSLRAGSPS*AGHSQA
Trigger: TGCCTGTGAGTGCCCGGCCCATGATGGTGACCCAGC...GCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCAGGCCCATTCCTGAGTGGGGGACACGGATCTTaGGGGCCTCAATGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HPLSPVSLAWGLPGPFLSGGHGS*GPQCSL
Trigger: GAGAGAACATTGAGGCCCCCAAGATCCGTGTCCCCC...ACTCAGGAATGGGCCTGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCGCCTGTGTCCTGGGGTaGCGTCCACTGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: FECFPPRVQLRRALQSLRACVLG*RPLKSS
Trigger: GCTGCTCTTCAGTGGACGCCACCCCAGGACACAGGC...GCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTGATGGTGCAGGTGGTTaGGTGGTAGCGCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SAGHSNLCAFQHPLSPVSDGAGG*VVALQH
Trigger: GTGCTGGAGCGCTACCACCCAACCACCTGCACCATC...ACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp GTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCCAGAGATGGTGCAGGTaGTTGGGTGGTAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VLPTQSATPQGTPISAPSQRWCR*LGGSAP
Trigger: TGGAGCGCTACCACCCAACCACCTGCACCATCTCTG...GGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCAGGCCCATTCCTGAGTTCTGCCTTCTGGATGTaGGCGAGCTCCTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: HPLSPVSLAWGLPGPFLSSAFWM*ASSLVT
Trigger: CGTCACCAAGGAGCTCGCCCACATCCAGAAGGCAGA...ACTCAGGAATGGGCCTGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TCTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATTGGAAGCGGGGGTCTTaGGCATCTCTGGAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: SGEGRPAGTRGGSISRRYWKRGS*ASLEFD
Trigger: GTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCA...ATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTCCCATTCCTGAGTTCTaGACACCAGCCTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PAGTRGGSISRRYGSGGLPIPEF*TPASGE
Trigger: TTCCCCAGAGGCTGGTGTCCAGAACTCAGGAATGGG...AAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp CCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTAGCGCTCCAGCACTGTaGACCATTGCCCTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PAGTRGGSISRRYGSGGLSAPAL*TIALSF
Trigger: AAAAGACAGGGCAATGGTTCACAGTGCTGGAGCGCT...AAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp CTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCAAGCGCTCCAGCACTGTaGACCATTGCCCTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: LCAFQHPLSPVSLAWGLPSAPAL*TIALSF
Trigger: AAAAGACAGGGCAATGGTTCACAGTGCTGGAGCGCT...TGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCACAGTCACAGAGCTGCTaGTCACATCATCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LCAFQHPLSPVSLAWGLPQSQSC*SHHPGS
Trigger: TGACCCTGGATGATGTGAGCAGCAGCTCTGTGACTG...TGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp AGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGAGGTTCCGCACAGTCTaGTGGGTCACCATCATGGGC +
Preference number: 4 (lower is better)
Translates to: RVQLRRALQSLRLPAPLERFRTV*WVTIMG
Trigger: GCCCATGATGGTGACCCAGCAGACTGTGCGGAACCT...CTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGCCCTGTCTTTTTGTCTaGCTTCTGCACCATGTAGCC +
Preference number: 4 (lower is better)
Translates to: LGKGGQQVPGAVPSAVAMPCLFV*LLHHVA
Trigger: GGCTACATGGTGCAGAAGGCAGACAAAAAGACAGGG...CATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAACGCGGTATTTGGGGTTaGCCTGGATCTCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: GKGGQQVPGAVPSAVAMERGIWG*PGSPSC
Trigger: ACAAGATGGAGATCCAGGGCAACCCCAAATACCGCG...TTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp AAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGCGCGGTATTTGGGGTTaGCCTGGATCTCCATCTTGT +
Preference number: 4 (lower is better)
Translates to: KGGQQVPGAVPSAVAMEARGIWG*PGSPSC
Trigger: ACAAGATGGAGATCCAGGGCAACCCCAAATACCGCG...CGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCTCCGGATCTCTAGGGTaGAGACGCCTTGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ECNSAGHSNLCAFQHPLSSGSLG*RRLAQR
Trigger: TCTCTGAGCAAGGCGTCTGCACCCTAGAGATCCGGA...GCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp TTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCGGGCACTCCAATCTCTaGGCCTTCCAGCACCCCTTG +
Preference number: 4 (lower is better)
Translates to: FECFPPRVQLRRALQSLRGHSNL*AFQHPL
Trigger: CAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC...GCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGTGAAGCTCGACACTaGAGAACAACTGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PAGTRGGSISRRYGSGGLGEARH*RTTGCC
Trigger: ACAGCACCCAGTTGTTCTGCAGTGTCGAGCTTCACC...AAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621380.1
CDS-3UTR CCA 90 bp AACACCACGCATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCGGATGTGGATGGGCTaGTCCAGCATGGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: NTTHLYLSASHPECNSAGRMWMG*SSMAGG
Trigger: CCCGCCGGCCATGCTGGACCAGCCCATCCACATCCG...CCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATGCGTGGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp GAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCGGCTTAGGCTTCCCCTaGAAGGGGATTTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ECNSAGHSNLCAFQHPLSGLGFP*KGICRL
Trigger: CAACCTGCAAATCCCCTTCCAGGGGAAGCCTAAGCC...GCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCAGGCCCATTCCTGAGTGGCTTAGGCTTCCCCTaGAAGGGGATTTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HPLSPVSLAWGLPGPFLSGLGFP*KGICRL
Trigger: CAACCTGCAAATCCCCTTCCAGGGGAAGCCTAAGCC...ACTCAGGAATGGGCCTGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGAGTTTGACCCAGAGTCGGAGCGCTaGGCCGAGCGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FHQPSLWKRGSWASLEFDPESER*AERMKR
Trigger: CCTCTTCATTCGCTCGGCCCAGCGCTCCGACTCTGG...GTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp GAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCTGGAAGCGGGGGTCTTaGGCATCTCTGGAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: ECNSAGHSNLCAFQHPLSWKRGS*ASLEFD
Trigger: GTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCA...GCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCAGGCCCATTCCTGAGTCCCATTCCTGAGTTCTaGACACCAGCCTCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: HPLSPVSLAWGLPGPFLSPIPEF*TPASGE
Trigger: TTCCCCAGAGGCTGGTGTCCAGAACTCAGGAATGGG...ACTCAGGAATGGGCCTGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp GTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCTCCACACAGGTTTTCTaGGAAGACCCGGAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: VQLRRALQSLRLPAPLEPSTQVF*EDPEGV
Trigger: TACTCCTTCCGGGTCTTCTCAGAAAACCTGTGTGGA...GGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp AGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGGATCTTGGGCTTGGGTaGAGCTCGGACACTGCAGAA +
Preference number: 4 (lower is better)
Translates to: RVQLRRALQSLRLPAPLEDLGLG*SSDTAE
Trigger: TTCTGCAGTGTCCGAGCTTCACCCAAGCCCAAGATC...CTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255416.9
CDS-3UTR GCA 90 bp CATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCGGTCTCCTCTGGACTaGAGGCAGGGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: HLYLSASHPECNSAGHSNRSPLD*RQGPRR
Trigger: CCTCCGAGGGCCCTGCCTGCAGTCCAGAGGAGACCG...ATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp TCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTGGTCCCCGGTGCGCATaGTCACCCGCTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SLFECFPPRVQLRRALQSGPRCA*SPAGCP
Trigger: TGGACAGCCAGCGGGTGAGCATGCGCACCGGGGACC...AGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATAGTCCTGGTCCCCGGTaGGCATGCTCACCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: HLYLSASHPECNSAGHSNSPGPR*ACSPAG
Trigger: GCCAGCGGGTGAGCATGCGCACCGGGGACCAGGACT...ATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp GGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAACCCTGTCTTTTTGTCTaGCTTCTGCACCATGTAGCC +
Preference number: 4 (lower is better)
Translates to: GKGGQQVPGAVPSAVAMEPCLFV*LLHHVA
Trigger: GGCTACATGGTGCAGAAGGCAGACAAAAAGACAGGG...TTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp TCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTTCCGGATCTCTAGGGTaGAGACGCCTTGCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SAGHSNLCAFQHPLSPVSSGSLG*RRLAQR
Trigger: TCTCTGAGCAAGGCGTCTGCACCCTAGAGATCCGGA...ACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp GTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCTCCACACAGGTTTTCTaGGAAGACCCGGAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: VLPTQSATPQGTPISAPSSTQVF*EDPEGV
Trigger: TACTCCTTCCGGGTCTTCTCAGAAAACCTGTGTGGA...GGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp GCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGTGTTTTTCATCCAGATaGTCTTGGGCTTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AGTRGGSISRRYGSGGLGCFSSR*SWAWVK
Trigger: CTTCACCCAAGCCCAAGATCATCTGGATGAAAAACA...CCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000255416.9
CDS-3UTR TCA 90 bp CATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATGTGCGGCTGAGGCTTTaGCCTCCAGCCGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: HLYLSASHPECNSAGHSNVRLRL*PPAGSP
Trigger: TGGACTGCCGGCTGGAGGTCAAAGCCTCAGCCGCAC...ATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp AGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCTTGGCAGATTCAGATaGGGTCTCCTCTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: RVQLRRALQSLRLPAPLELGRFR*GLLWTA
Trigger: TGCAGTCCAGAGGAGACCGCATCTGAATCTGCCAAG...CTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp TCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCAGTCACAGAGCTGCTaGTCACATCATCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SAGHSNLCAFQHPLSPVSQSQSC*SHHPGS
Trigger: TGACCCTGGATGATGTGAGCAGCAGCTCTGTGACTG...ACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp TCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCAGGATGTCAATGACTaGCTTGGCCTCCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SAGHSNLCAFQHPLSPVSQDVND*LGLQVF
Trigger: GAAGACCTGGAGGCCAAGGCAGTCATTGACATCCTG...ACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp AAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGCACATTTATGGCCTTaGAGGTGTAGACCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: KGGQQVPGAVPSAVAMEAAHLWP*RCRPQN
Trigger: ATTCTGGGGTCTACACCTGCAAGGCCATAAATGTGC...CGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp AACACCACGCATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGGCTTCCCACCCAGAGTaGAACTCCGCAGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: NTTHLYLSASHPECNSAGASHPE*NSAGHS
Trigger: GGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGC...CCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATGCGTGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp AGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGATGTTCTCTCGGATGTaGATGGGCTGGTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: RVQLRRALQSLRLPAPLEMFSRM*MGWSSM
Trigger: CATGCTGGACCAGCCCATCCACATCCGAGAGAACAT...CTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp TTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTGGCAGATTCAGATaGGGTCTCCTCTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: FECFPPRVQLRRALQSLRLGRFR*GLLWTA
Trigger: TGCAGTCCAGAGGAGACCGCATCTGAATCTGCCAAG...GCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGAGTTTGACCTGCTGTGGGCACCTTaGCAGATTCAGATGCGGTCT +
Preference number: 4 (lower is better)
Translates to: FHQPSLWKRGSWASLEFDLLWAP*QIQMRS
Trigger: AGACCGCATCTGAATCTGCCAAGGTGCCCACAGCAG...GTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCGGTCTTGGGCATCTCTaGAGTTTGACTGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FECFPPRVQLRRALQSLRGLGHL*SLTVGL
Trigger: CAGGCCTACAGTCAAACTCCAGAGATGCCCAAGACC...GCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp TCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTGCTGGGCCGAGCGAATaGAGAGGATGGAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLFECFPPRVQLRRALQSAGPSE*RGWSPG
Trigger: ACCAGGACTCCATCCTCTTCATTCGCTCGGCCCAGC...AGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp TTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGAGTTTGACCAGGATGTCAATGACTaGCTTGGCCTCCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: FHQPSLWKRGSWASLEFDQDVND*LGLQVF
Trigger: GAAGACCTGGAGGCCAAGGCAGTCATTGACATCCTG...GTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATGGGCACTCCAATCTCTaGGCCTTCCAGCACCCCTTG +
Preference number: 4 (lower is better)
Translates to: HLYLSASHPECNSAGHSNGHSNL*AFQHPL
Trigger: CAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC...ATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATTTCCGCACAGTCTGCTaGGTCACCATCATGGGCCGG +
Preference number: 4 (lower is better)
Translates to: HLYLSASHPECNSAGHSNFRTVC*VTIMGR
Trigger: CCGGCCCATGATGGTGACCCAGCAGACTGTGCGGAA...ATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTTGGTCAGCCAGGGGCTaGGTGAATGAGGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLFECFPPRVQLRRALQSWSARG*VNEGAS
Trigger: AGAAGCCCCCTCATTCACCCAGCCCCTGGCTGACCA...AGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCCAGTTAGTCTGGCCTaGGGCCTACCAGGCCCATTC +
Preference number: 4 (lower is better)
Translates to: SLFECFPPRVQLRRALQSPVSLA*GLPGPF
Trigger: GAATGGGCCTGGTAGGCCCCAGGCCAGACTAACTGG...AGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp CATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCAGAGATGGTGCAGGTaGTTGGGTGGTAGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: HLYLSASHPECNSAGHSNQRWCR*LGGSAP
Trigger: TGGAGCGCTACCACCCAACCACCTGCACCATCTCTG...ATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp TCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTTTCTCTGGTGGACTCTaGTACTGCCACTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SLFECFPPRVQLRRALQSFSGGL*YCHFSG
Trigger: CCCGGAGAAGTGGCAGTATCAGAGTCCACCAGAGAA...AGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp AACACCACGCATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGGTGAAGCTCGGACACTaGAGAACAACTGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NTTHLYLSASHPECNSAGVKLGH*RTTGCC
Trigger: ACAGCACCCAGTTGTTCTGCAGTGTCCGAGCTTCAC...CCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATGCGTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255416.9
CDS-3UTR GCA 90 bp TTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGAGTTTGACGCACATTTATGGCCTTaGAGGTGTAGACCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: FHQPSLWKRGSWASLEFDAHLWP*RCRPQN
Trigger: ATTCTGGGGTCTACACCTGCAAGGCCATAAATGTGC...GTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR GCA 90 bp CATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCCGGCAGTCCACAGATaGCTCCCCCAGCACATTTAT +
Preference number: 4 (lower is better)
Translates to: HLYLSASHPECNSAGHSNPAVHR*LPQHIY
Trigger: ATAAATGTGCTGGGGGAGGCATCTGTGGACTGCCGG...ATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTATGTTCTCTCGGATGTaGATGGGCTGGTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: SLFECFPPRVQLRRALQSMFSRM*MGWSSM
Trigger: CATGCTGGACCAGCCCATCCACATCCGAGAGAACAT...AGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CCA 90 bp TCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTGGTCTTGGGCATCTCTaGAGTTTGACTGTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SLFECFPPRVQLRRALQSGLGHL*SLTVGL
Trigger: CAGGCCTACAGTCAAACTCCAGAGATGCCCAAGACC...AGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR TCA 90 bp TCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTTGTTTTTCATCCAGATaGTCTTGGCTTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLFECFPPRVQLRRALQSCFSSR*SWLGEA
Trigger: AGCTTCACCAAGCCAAGATCATCTGGATGAAAAACA...AGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621380.1
CDS GCA 90 bp GGGCTGGTCCAGCATGGCCGGCGGGCCAGCCCCTGCAGAACTCACTaGAGACACGCGCAGGAGGAACTTGTCTCCCAGAGCCAGGTTCCG +
Preference number: 5 (lower is better)
Translates to: GLVQHGRRASPCRTH*RHAQEELVSQSQVP
Trigger: CGGAACCTGGCTCTGGGAGACAAGTTCCTCCTGCGCGTGTCTGCAGTGAGTTCTGCAGGGGCTGGCCCGCCGGCCATGCTGGACCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp CTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGTGTGCGGCTGAGGCTTaGACCTCCAGCCGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: LGKGGQQVPGAVPSAVAMCAAEA*TSSRQS
Trigger: GGACTGCCGGCTGGAGGTCAAAGCCTCAGCCGCACA...CATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS GCA 90 bp TCGGATGTGGATGGGCTGGTCCAGCATGGCCGGCGGGCCAGCCCCTaGAGAACTCACTGCAGACACGCGCAGGAGGAACTTGTCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SDVDGLVQHGRRASP*RTHCRHAQEELVSQ
Trigger: CTGGGAGACAAGTTCCTCCTGCGCGTGTCTGCAGTGAGTTCTGCAGGGGCTGGCCCGCCGGCCATGCTGGACCAGCCCATCCACATCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS CCA 90 bp TGTCTCCCAGAGCCAGGTTCCGCACAGTCTGCTGGGTCACCATCATaGGCCGGGCACTCACAGGCACCCACTCCGAGGCTCCCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: CLPEPGSAQSAGSPS*AGHSQAPTPRLPLC
Trigger: GCAGAGAGGGAGCCTCGGAGTGGGTGCCTGTGAGTGCCCGGCCCATGATGGTGACCCAGCAGACTGTGCGGAACCTGGCTCTGGGAGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS CCA 90 bp TGGGGGCCTCAATGTTCTCTCGGATGTGGATGGGCTGGTCCAGCATaGCCGGCGGGCCAGCCCCTGCAGAACTCACTGCAGACACGCGCA +
Preference number: 5 (lower is better)
Translates to: WGPQCSLGCGWAGPA*PAGQPLQNSLQTRA
Trigger: TGCGCGTGTCTGCAGTGAGTTCTGCAGGGGCTGGCCCGCCGGCCATGCTGGACCAGCCCATCCACATCCGAGAGAACATTGAGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCATGTGGGCGAGCTCCTaGGTGACGGTGGCCGAGGTG +
Preference number: 5 (lower is better)
Translates to: VQLRRALQSLRLPAPLEPMWASS*VTVAEV
Trigger: CACCTCGGCCACCGTCACCAAGGAGCTCGCCCACAT...GGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp CAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGATGTGGGCGAGCTCCTaGGTGACGGTGGCCGAGGTG +
Preference number: 5 (lower is better)
Translates to: QGRFHQPSLWKRGSWASLMWASS*VTVAEV
Trigger: CACCTCGGCCACCGTCACCAAGGAGCTCGCCCACAT...CAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGGAGAGGGCGCGGTATTaGGGGTTGCCCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: AGTRGGSISRRYGSGGLGERARY*GLPWIS
Trigger: GGAGATCCAGGGCAACCCCAAATACCGCGCCCTCTC...CCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAATGTGCGGCTGAGGCTTaGACCTCCAGCCGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: GKGGQQVPGAVPSAVAMECAAEA*TSSRQS
Trigger: GGACTGCCGGCTGGAGGTCAAAGCCTCAGCCGCACA...TTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS GCA 90 bp ACGCGCAGGAGGAACTTGTCTCCCAGAGCCAGGTTCCGCACAGTCTaGTGGGTCACCATCATGGGCCGGGCACTCACAGGCACCCACTCC +
Preference number: 5 (lower is better)
Translates to: TRRRNLSPRARFRTV*WVTIMGRALTGTHS
Trigger: GGAGTGGGTGCCTGTGAGTGCCCGGCCCATGATGGTGACCCAGCAGACTGTGCGGAACCTGGCTCTGGGAGACAAGTTCCTCCTGCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS CCA 90 bp CGCAGGAGGAACTTGTCTCCCAGAGCCAGGTTCCGCACAGTCTGCTaGGTCACCATCATGGGCCGGGCACTCACAGGCACCCACTCCGAG +
Preference number: 5 (lower is better)
Translates to: RRRNLSPRARFRTVC*VTIMGRALTGTHSE
Trigger: CTCGGAGTGGGTGCCTGTGAGTGCCCGGCCCATGATGGTGACCCAGCAGACTGTGCGGAACCTGGCTCTGGGAGACAAGTTCCTCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGACGCGCAGGAGGAACTaGTCTCCCAGAGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: AGTRGGSISRRYGSGGLGTRRRN*SPRARF
Trigger: GAACCTGGCTCTGGGAGACAAGTTCCTCCTGCGCGT...CCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCGAGAGGGCGCGGTATTaGGGGTTGCCCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: VQLRRALQSLRLPAPLEPERARY*GLPWIS
Trigger: GGAGATCCAGGGCAACCCCAAATACCGCGCCCTCTC...GGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCCTTCCAGCACCCCTaGAGCCCAGTTAGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: GKGGQQVPGAVPSAVAMEAFQHP*SPVSLA
Trigger: GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGC...TTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp CAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGCCTTCCAGCACCCCTaGAGCCCAGTTAGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: QGRFHQPSLWKRGSWASLAFQHP*SPVSLA
Trigger: GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGC...CAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS CCA 90 bp ACACGGATCTTGGGGGCCTCAATGTTCTCTCGGATGTGGATGGGCTaGTCCAGCATGGCCGGCGGGCCAGCCCCTGCAGAACTCACTGCA +
Preference number: 5 (lower is better)
Translates to: TRILGASMFSRMWMG*SSMAGGPAPAELTA
Trigger: TGCAGTGAGTTCTGCAGGGGCTGGCCCGCCGGCCATGCTGGACCAGCCCATCCACATCCGAGAGAACATTGAGGCCCCCAAGATCCGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp CTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGTCTGCTGTGGGCACCTaGGCAGATTCAGATGCGGTC +
Preference number: 5 (lower is better)
Translates to: LGKGGQQVPGAVPSAVAMSAVGT*ADSDAV
Trigger: GACCGCATCTGAATCTGCCAAGGTGCCCACAGCAGA...CATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGAAGGGGATTTGCAGGTaGACCGTCTCTCCCACCTGG +
Preference number: 5 (lower is better)
Translates to: AGTRGGSISRRYGSGGLGKGICR*TVSPTW
Trigger: CCAGGTGGGAGAGACGGTCAACCTGCAAATCCCCTT...CCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGATGGTGCAGGTGGTaGGGTGGTAGCGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: VQLRRALQSLRLPAPLEPRWCRW*GGSAPA
Trigger: TGCTGGAGCGCTACCACCCAACCACCTGCACCATCT...GGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp CAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCGCGCGGTATTTGGGGTaGCCCTGGATCTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: QVPGAVPSAVAMEAGVLGARYLG*PWISIL
Trigger: CAAGATGGAGATCCAGGGCAACCCCAAATACCGCGC...GCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp AAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGAAGGGGATTTGCAGGTaGACCGTCTCTCCCACCTGG +
Preference number: 5 (lower is better)
Translates to: KGGQQVPGAVPSAVAMEAKGICR*TVSPTW
Trigger: CCAGGTGGGAGAGACGGTCAACCTGCAAATCCCCTT...CGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTCTGCTGTGGGCACCTaGGCAGATTCAGATGCGGTC +
Preference number: 5 (lower is better)
Translates to: GHSNLCAFQHPLSPVSLASAVGT*ADSDAV
Trigger: GACCGCATCTGAATCTGCCAAGGTGCCCACAGCAGA...GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp TCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTACGCGCAGGAGGAACTaGTCTCCCAGAGCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SAGHSNLCAFQHPLSPVSTRRRN*SPRARF
Trigger: GAACCTGGCTCTGGGAGACAAGTTCCTCCTGCGCGT...ACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp CTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCACAGATGATCTTGGGCTaGGGTGAAGCTCGGACACTG +
Preference number: 5 (lower is better)
Translates to: LCAFQHPLSPVSLAWGLPQMILG*GEARTL
Trigger: CAGTGTCCGAGCTTCACCCAAGCCCAAGATCATCTG...TGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255416.9
CDS-3UTR CAA 90 bp GAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCGGGCATCTCTGGAGTTaGACTGTAGGCCTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: ECNSAGHSNLCAFQHPLSGHLWS*TVGLVD
Trigger: GTCCACCAGGCCTACAGTCAAACTCCAGAGATGCCC...GCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCATGTCAATGACTGCCTaGGCCTCCAGGTCTTCCACG +
Preference number: 5 (lower is better)
Translates to: GHSNLCAFQHPLSPVSLAMSMTA*ASRSST
Trigger: CGTGGAAGACCTGGAGGCCAAGGCAGTCATTGACAT...GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCAGCACTGTGAACCATaGCCCTGTCTTTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: AGTRGGSISRRYGSGGLGQHCEP*PCLFVC
Trigger: GCAGACAAAAAGACAGGGCAATGGTTCACAGTGCTG...CCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp TCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTGGGCATCTCTGGAGTTaGACTGTAGGCCTGGTGGAC +
Preference number: 5 (lower is better)
Translates to: SAGHSNLCAFQHPLSPVSGHLWS*TVGLVD
Trigger: GTCCACCAGGCCTACAGTCAAACTCCAGAGATGCCC...ACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp TTCCATCAGCCGTCGCTATGGAAGCGGGGGTCTTGGGCATCTCTGGAGTTTGACCGGGGGACACGGATCTaGGGGGCCTCAATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: FHQPSLWKRGSWASLEFDRGTRI*GASMFS
Trigger: AGAGAACATTGAGGCCCCCAAGATCCGTGTCCCCCG...GTCAAACTCCAGAGATGCCCAAGACCCCCGCTTCCATAGCGACGGCTGATGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp TCTGGGGAAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATCATTGCCCTGTCTTTTaGTCTGCCTTCTGCACCATG +
Preference number: 5 (lower is better)
Translates to: SGEGRPAGTRGGSISRRYHCPVF*SAFCTM
Trigger: CATGGTGCAGAAGGCAGACAAAAAGACAGGGCAATG...ATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTTCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCTTCATCCAGATGATCTaGGGCTTGGGTGAAGCTCGG +
Preference number: 5 (lower is better)
Translates to: VLPTQSATPQGTPISAPSFIQMI*GLGEAR
Trigger: CCGAGCTTCACCCAAGCCCAAGATCATCTGGATGAA...GGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255416.9
CDS-3UTR CAA 90 bp TCCGCAGGGCACTCCAATCTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCATTGCCCTGTCTTTTaGTCTGCCTTCTGCACCATG +
Preference number: 5 (lower is better)
Translates to: SAGHSNLCAFQHPLSPVSHCPVF*SAFCTM
Trigger: CATGGTGCAGAAGGCAGACAAAAAGACAGGGCAATG...ACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGTGCCCTGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp AACACCACGCATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGAGATGGTGCAGGTGGTaGGGTGGTAGCGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: NTTHLYLSASHPECNSAGRWCRW*GGSAPA
Trigger: TGCTGGAGCGCTACCACCCAACCACCTGCACCATCT...CCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATGCGTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp AAGGGAGGCCAGCAGGTACCAGGGGCGGTTCCATCAGCCGTCGCTATGGAAGCGCCCTGGATCTCCATCTaGTTTTTCATCCAGATGATC +
Preference number: 5 (lower is better)
Translates to: KGGQQVPGAVPSAVAMEAPWISI*FFIQMI
Trigger: GATCATCTGGATGAAAAACAAGATGGAGATCCAGGG...CGCTTCCATAGCGACGGCTGATGGAACCGCCCCTGGTACCTGCTGGCCTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp CTCTGCGCCTTCCAGCACCCCTTGAGCCCAGTTAGTCTGGCCTGGGGCCTACCACCCTGGATCTCCATCTaGTTTTTCATCCAGATGATC +
Preference number: 5 (lower is better)
Translates to: LCAFQHPLSPVSLAWGLPPWISI*FFIQMI
Trigger: GATCATCTGGATGAAAAACAAGATGGAGATCCAGGG...TGGTAGGCCCCAGGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp GTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTCTGCGCCTTCCATAAACCCTTTAGGTTaGGCAGCAATATCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: VLPTQSATPQGTPISAPSINPLG*AAISAF
Trigger: GAAGGCAGATATTGCTGCCAAACCTAAAGGGTTTAT...GGAAGGCGCAGAGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp CATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATATGTCAATGACTGCCTaGGCCTCCAGGTCTTCCACG +
Preference number: 5 (lower is better)
Translates to: HLYLSASHPECNSAGHSNMSMTA*ASRSST
Trigger: CGTGGAAGACCTGGAGGCCAAGGCAGTCATTGACAT...ATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp CATCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCAGCACTGTGAACCATaGCCCTGTCTTTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: HLYLSASHPECNSAGHSNQHCEP*PCLFVC
Trigger: GCAGACAAAAAGACAGGGCAATGGTTCACAGTGCTG...ATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS-3UTR CAA 90 bp TCTTTATTTGAGTGCTTCCCACCCAGAGTGCAACTCCGCAGGGCACTCCAATCTATAAACCCTTTAGGTTaGGCAGCAATATCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SLFECFPPRVQLRRALQSINPLG*AAISAF
Trigger: GAAGGCAGATATTGCTGCCAAACCTAAAGGGTTTAT...AGATTGGAGTGCCCTGCGGAGTTGCACTCTGGGTGGGAAGCACTCAAATAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS GCA 72 bp CAGCATGGCCGGCGGGCCAGCCCCTGCAGAACTCACTaGAGACACGCGCAGGAGGAACTTGTCTCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: QHGRRASPCRTH*RHAQEELVSQS
Trigger: GCTCTGGGAGACAAGTTCCTCCTGCGCGTGTCTGCAGTGAGTTCTGCAGGGGCTGGCCCGCCGGCCATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS CCA 72 bp GAGCCAGGTTCCGCACAGTCTGCTGGGTCACCATCATaGGCCGGGCACTCACAGGCACCCACTCCGAGGCTC +
Preference number: 6 (lower is better)
Translates to: EPGSAQSAGSPS*AGHSQAPTPRL
Trigger: GAGCCTCGGAGTGGGTGCCTGTGAGTGCCCGGCCCATGATGGTGACCCAGCAGACTGTGCGGAACCTGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS GCA 72 bp GGGAGGCTCTGCTGTGGGCACCTTGGCAGATTCAGATaGGGTCTCCTCTGGACTGCAGGCAGGGCCCTCGGA +
Preference number: 6 (lower is better)
Translates to: GRLCCGHLGRFR*GLLWTAGRALG
Trigger: TCCGAGGGCCCTGCCTGCAGTCCAGAGGAGACCGCATCTGAATCTGCCAAGGTGCCCACAGCAGAGCCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS CCA 72 bp TTGGGGGCCTCAATGTTCTCTCGGATGTGGATGGGCTaGTCCAGCATGGCCGGCGGGCCAGCCCCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: LGASMFSRMWMG*SSMAGGPAPAE
Trigger: TTCTGCAGGGGCTGGCCCGCCGGCCATGCTGGACCAGCCCATCCACATCCGAGAGAACATTGAGGCCCCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS CCA 72 bp CAATGTTCTCTCGGATGTGGATGGGCTGGTCCAGCATaGCCGGCGGGCCAGCCCCTGCAGAACTCACTGCAG +
Preference number: 6 (lower is better)
Translates to: QCSLGCGWAGPA*PAGQPLQNSLQ
Trigger: CTGCAGTGAGTTCTGCAGGGGCTGGCCCGCCGGCCATGCTGGACCAGCCCATCCACATCCGAGAGAACATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS GCA 72 bp GCTTGGGTGAAGCTCGGACACTGCAGAACAACTGGGTaGTGTAGCCAGGGGTGGAGGTGTGGTCAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: AWVKLGHCRTTG*CSQGWRCGQPG
Trigger: CCCTGGCTGACCACACCTCCACCCCTGGCTACAGCACCCAGTTGTTCTGCAGTGTCCGAGCTTCACCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255416.9
CDS GCA 72 bp TGGCTTGGTGAAGCTCGACACTGCAGAACAACTGGGTaGTGTAGCCAGGGGTGGAGGTGTGGTCAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: WLGEARHCRTTG*CSQGWRCGQPG
Trigger: CCCTGGCTGACCACACCTCCACCCCTGGCTACAGCACCCAGTTGTTCTGCAGTGTCGAGCTTCACCAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621380.1
CDS GCA 72 bp CAGAATCAAAGGGGCTGGGTTTCCGGATCTCTAGGGTaGAGACGCCTTGCTCAGAGAGGGCGCGGTATTTGG +
Preference number: 6 (lower is better)
Translates to: QNQRGWVSGSLG*RRLAQRGRGIW
Trigger: CCAAATACCGCGCCCTCTCTGAGCAAGGCGTCTGCACCCTAGAGATCCGGAAACCCAGCCCCTTTGATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS GCA 72 bp CTCCAGCACTGTGAACCATTGCCCTGTCTTTTTGTCTaGCTTCTGCACCATGTAGCCCAGGAGCTCTGTGTT +
Preference number: 6 (lower is better)
Translates to: LQHCEPLPCLFV*LLHHVAQELCV
Trigger: AACACAGAGCTCCTGGGCTACATGGTGCAGAAGGCAGACAAAAAGACAGGGCAATGGTTCACAGTGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1
CDS CAA 72 bp GCTTCTGAGAAGTCTCGCTCAATAAACCCTTTAGGTTaGGCAGCAATATCTGCCTTCTGGATGTGGGCGAGC +
Preference number: 6 (lower is better)
Translates to: ASEKSRSINPLG*AAISAFWMWAS
Trigger: GCTCGCCCACATCCAGAAGGCAGATATTGCTGCCAAACCTAAAGGGTTTATTGAGCGAGACTTCTCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255416.9
ENST00000621380.1