RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MYBPC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000134571

Ensembl transcript IDs: ENST00000256993.8, ENST00000399249.6, ENST00000544791.1, ENST00000545968.6

Found 857 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTaGGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: SHPGLLLPRALGAAT*GRPWCQRRPLLPGG
Trigger: CCCACCTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544791.1
3UTR CCA 90 bp GTACTCCACGCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTaGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTC +
Preference number: 1 (lower is better)
Translates to: VLHAVAIQASCSHAL*GPPLEGDRGVRDVL
Trigger: GAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGCGTGGAGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544791.1
3UTR GCA 90 bp CTGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTaGCCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCAC +
Preference number: 1 (lower is better)
Translates to: LWTSLCNTHSGLPDN*PADPPSQHRRHTCH
Trigger: GTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR TCA 90 bp CAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTaGTCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACAT +
Preference number: 1 (lower is better)
Translates to: QSVQHPLRTARQLPC*SPIAAQETHLSHIH
Trigger: ATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR-3UTR TCA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCCTGGGGGCCGCCACTTaGGGGAGACCGTGGTGTCAG +
Preference number: 2 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLLGAAT*GRPWCQ
Trigger: CTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAG...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544791.1
3UTR-3UTR TCA 90 bp CGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTACATGCCGATGGCGTTaGCCGCGTAGACGCGCATCT +
Preference number: 2 (lower is better)
Translates to: RSGGRHLRETVVSETSSTTCRWR*PRRRAS
Trigger: AGATGCGCGTCTACGCGGTCAACGCCATCGGCATGT...AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
3UTR-3UTR TCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCCGACAACTGCCCTGCTaGTCCCCCATCGCAGCACAG +
Preference number: 2 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSRQLPC*SPIAAQ
Trigger: CTGTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCG...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTTCCCTCCAGGCTCCTaGCACGGGGCTGGCATCCGG +
Preference number: 2 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQFPPGS*HGAGIR
Trigger: CCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR-3UTR GCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACTGTGGACCAGTCTGTaGAACACCCACTCAGGACTG +
Preference number: 2 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPLWTSL*NTHSGL
Trigger: CAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACAG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCTCCTGGCACGGGGCTaGCATCCGGTTGTACCTGGC +
Preference number: 2 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSLLARG*HPVVPG
Trigger: GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR-3UTR GCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCTGTGGACCAGTCTGTaGAACACCCACTCAGGACTG +
Preference number: 2 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSLWTSL*NTHSGL
Trigger: CAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACAG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR-3UTR TCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTaGGGCCACCCTCCTTTTACC +
Preference number: 2 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSPDIVS*GHPPFT
Trigger: GGTAAAAGGAGGGTGGCCTCAAGAAACAATGTCTGG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR TCA 72 bp GGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTaGGGGAGACCGTGGTGTCAGAGACGTCCTCTACTG +
Preference number: 3 (lower is better)
Translates to: GLLLPRALGAAT*GRPWCQRRPLL
Trigger: CAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544791.1
3UTR CCA 72 bp GCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTaGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGA +
Preference number: 3 (lower is better)
Translates to: AVAIQASCSHAL*GPPLEGDRGVR
Trigger: TCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544791.1
3UTR GCA 72 bp CCCTGTGGACCAGTCTGTGCAACACCCACTCAGGACTaGCCGACAACTGCCCTGCTGATCCCCCATCGCAGC +
Preference number: 3 (lower is better)
Translates to: PCGPVCATPTQD*PTTALLIPHRS
Trigger: GCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR-3UTR CAA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAGGGGCTGGCATCCGGTaGTACCTGGCCATCCCCAGG +
Preference number: 3 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQGAGIR*YLAIPR
Trigger: CCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCC...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR-3UTR CAA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAGGGGCTGGCATCCGGTaGTACCTGGCCATCCCCAGG +
Preference number: 3 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPGAGIR*YLAIPR
Trigger: CCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCC...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR TCA 72 bp CAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTaGTCCCCCATCGCAGCACAGGAGACACACTTGTCA +
Preference number: 3 (lower is better)
Translates to: QHPLRTARQLPC*SPIAAQETHLS
Trigger: TGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR-3UTR CAA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTGGGGCTGGCATCCGGTaGTACCTGGCCATCCCCAGG +
Preference number: 3 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSGAGIR*YLAIPR
Trigger: CCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCC...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAGCACAGGAGACACACTaGTCACACATACATCCAACA +
Preference number: 3 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPAQETH*SHIHPT
Trigger: TGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR-3UTR CAA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCGCACAGGAGACACACTaGTCACACATACATCCAACA +
Preference number: 3 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSAQETH*SHIHPT
Trigger: TGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR CCA 72 bp TGTGACTGCACTTATCTTTTATTGCCCAATAAACATTaGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCA +
Preference number: 3 (lower is better)
Translates to: CDCTYLLLPNKH*EDIAGQKGLSP
Trigger: TGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAGATAAGTGCAGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGCCGGCCACGCGGGCTaGGAAGGTGATGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: AVAIQASCSHALWGPPLEAGHAG*EGDAAT
Trigger: GGTGGCAGCATCACCTTCTCAGCCCGCGTGGCCGGC...CTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCCTGGGGGCCGCCACTTaGGGGAGACCGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVLGAAT*GRPWCQ
Trigger: CTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAG...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCTGCTGCGGTCCTTGGTaGTCTCCACGCGGACCCGGC +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVCCGPW*SPRGPG
Trigger: GCCGGGTCCGCGTGGAGACCACCAAGGACCGCAGCA...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCTGCTCCCACGCGCTCTaGGGGCCGCCACTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVCSHAL*GPPLEG
Trigger: TCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCA...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCGCCGGCCACGCGGGCTaGGAAGGTGATGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAAGHAG*EGDAAT
Trigger: GGTGGCAGCATCACCTTCTCAGCCCGCGTGGCCGGC...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCGCCATCCAGGCCTCCTaGTCCCACGCGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAAIQAS*SHALWG
Trigger: CCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCTCCAGGGGCTCCAGTaGCCTCAGCAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGLQGLQ*PQQGQG
Trigger: CCCCTGCCCCTGCTGAGGCCACTGGAGCCCCTGGAG...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCCGCGCCTCATGCCCTTaGGCCTCTTTAGCATGCCGC +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVRASCP*ASLACR
Trigger: GCGGCATGCTAAAGAGGCTCAAGGGCATGAGGCGCG...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCCTGCCCCCTCGACCGTaGAGATGCTGCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSLPPRP*RCCGPW
Trigger: CCAAGGACCGCAGCATCTTCACGGTCGAGGGGGCAG...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCCCTCTCCCACGTTGCTaGTCTTGGGGGCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSPLPRC*SWGPQV
Trigger: CACCTGCGGCCCCCAAGATCAGCAACGTGGGAGAGG...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAAGGTGCCTGGGCAGCTaGAGCCGTGGCCGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPRCLGS*SRGRCR
Trigger: CCTGCAACGGCCACGGCTTCAGCTGCCCAGGCACCT...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCTCAGCGTATGCCGTGTaGCCTCTGTGGCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVSAYAV*PLWPGR
Trigger: ACGGCCTGGCCACAGAGGGCACACGGCATACGCTGA...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCGGTCCAGGTCTCCGGTaGCCATGGCCTCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSGPGLR*PWPRGQ
Trigger: CTGTCCACGAGGCCATGGGCACCGGAGACCTGGACC...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCCTTGGGGGCCGCAGGTaGGTCTGGCACGTCGATGAC +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSLGGRR*VWHVDD
Trigger: GTCATCGACGTGCCAGACGCACCTGCGGCCCCCAAG...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCTGCTCCCACGCGCTCTaGGGGCCGCCACTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLACSHAL*GPPLEG
Trigger: TCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCA...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCGCAGCCGGGCCCCCGTaGGCAGGTCCTTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGAAGPP*AGPSPV
Trigger: TACTGGTGAAGGACCTGCCCACGGGGGCCCGGCTGC...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCTCTGGCGCAGGTGCCTaGGCAGCTGAAGCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLASGAGA*AAEAVA
Trigger: GGCCACGGCTTCAGCTGCCCAGGCACCTGCGCCAGA...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCTTCCCTCCAGGCTCCTaGCACGGGGCTGGCATCCGG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPFPPGS*HGAGIR
Trigger: CCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCACTCAGCTCCCAGGATaGGCTGCCCGCCATCGTAGG +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVTQLPG*AARHRR
Trigger: CCTACGATGGCGGGCAGCCCATCCTGGGAGCTGAGT...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp CACGCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTCCGGCTCAGGCATCCTaGGAGACGTCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: HAVAIQASCSHALWGPPLPAQAS*ETSHQA
Trigger: TGCCTGGTGTGACGTCTCTCAGGATGCCTGAGCCGG...AAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp TCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGTGCGTCGTCCGCCAATaGGCACTGGCTGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: SRPPAPTRSGGRHLRETVCVVRQ*ALADGQ
Trigger: CTGACCATCAGCCAGTGCTCATTGGCGGACGACGCA...CACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp GCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACGAAGTGGAGCTTGGCTaGCAGGTTGCAGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: AIQASCSHALWGPPLEGDEVELG*QVAGEA
Trigger: GGCTTCGCCTGCAACCTGTCAGCCAAGCTCCACTTC...GTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCTGCCCCCTCGACCGTaGAGATGCTGCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPLPPRP*RCCGPW
Trigger: CCAAGGACCGCAGCATCTTCACGGTCGAGGGGGCAG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCGGCGAGCGGCCCGGATaGACAGGATGGTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAGERPG*TGWCLW
Trigger: CCACAGACACCATCCTGTTCATCCGGGCCGCTCGCC...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCGAACACGGCAGGGCTaGCTGCGGCCACTTCCACTG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPRTRQG*LRPLPL
Trigger: CAGTGGAAGTGGCCGCAGGCAGCCCTGCCGTGTTCG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCTCACTGCCTCCGCGCTaGCAGCGCACCTTCACTCCT +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSSLPPR*QRTFTP
Trigger: AGGAGTGAAGGTGCGCTGGCAGCGCGGAGGCAGTGA...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCGGTCCAGGTCTCCGGTaGCCATGGCCTCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPGPGLR*PWPRGQ
Trigger: CTGTCCACGAGGCCATGGGCACCGGAGACCTGGACC...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACGTCCTCCTCTGCTGGTaGCTCCAGCTTCGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: AIQASCSHALWGPPLEGDVLLCW*LQLRVP
Trigger: AGGGACTCGAAGCTGGAGGCACCAGCAGAGGAGGAC...GTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp GCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACTCAGATGGGGGTGCCTaGCGTAGGATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: AIQASCSHALWGPPLEGDSDGGA*RRISHT
Trigger: CGTGTGGGAGATCCTACGGCAGGCACCCCCATCTGA...GTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CACGCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTCCCGCTAGTGCACAGTaGATAGTGCCCCGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: HAVAIQASCSHALWGPPLPASAQ*IVPRVL
Trigger: GAGGACGCGGGGCACTATGCACTGTGCACTAGCGGG...AAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCACTTGGGGGCCGCAGGTaGGTCTGGCACGTCGATGAC +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPLGGRR*VWHVDD
Trigger: GTCATCGACGTGCCAGACGCACCTGCGGCCCCCAAG...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGCTCCAGGGGCTCCAGTaGCCTCAGCAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQLQGLQ*PQQGQG
Trigger: CCCCTGCCCCTGCTGAGGCCACTGGAGCCCCTGGAG...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCTGGGGCTGGCCTGGCTaGGGCCTTATTCCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPWGWPG*GLIPLR
Trigger: ACGCAGGGGAATAAGGCCCCAGCCAGGCCAGCCCCA...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CACGCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTAGATGCTGCGGTCCTTaGTGGTCTCCACGCGGACCC +
Preference number: 4 (lower is better)
Translates to: HAVAIQASCSHALWGPPLRCCGP*WSPRGP
Trigger: GGGTCCGCGTGGAGACCACCAAGGACCGCAGCATCT...AAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGGGCTGCCCCTCTTTaGTCCAGGTCACCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPGAAPL*SRSPEA
Trigger: GGCCTCAGGTGACCTGGACCAAAGAGGGGCAGCCCC...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCGGTTCACCAGGGGCTaGGTGAAGCTTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLARFTRG*VKLGAS
Trigger: CGAGGCCCCAAGCTTCACCCAGCCCCTGGTGAACCG...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCCCCAGGAGCCAGCCTaGTCACTGAGGCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAPQEPA*SLRHSH
Trigger: GTGCGAGTGCCTCAGTGACCAGGCTGGCTCCTGGGG...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCTCCTGGCACGGGGCTaGCATCCGGTTGTACCTGGC +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPLLARG*HPVVPG
Trigger: GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCACTCCTGGCACGGGGCTaGCATCCGGTTGTACCTGGC +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPLLARG*HPVVPG
Trigger: GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAG...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CACGCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTCGCCTGGCAGCCCTCTaGGCAGTACTCCACGCTGTA +
Preference number: 4 (lower is better)
Translates to: HAVAIQASCSHALWGPPLRLAAL*AVLHAV
Trigger: TACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCG...AAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCCGGCTCAGGCATCCTaGGAGACGTCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPPAQAS*ETSHQA
Trigger: TGCCTGGTGTGACGTCTCTCAGGATGCCTGAGCCGG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCGTCCTTCAGCCATTTaGCTTGCGCCCCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLARPSAI*LAPPPP
Trigger: CGGAGGAGGGGGCGCAAGTCAAATGGCTGAAGGACG...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCGACAACTGCCCTGCTaGTCCCCCATCGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGRQLPC*SPIAAQ
Trigger: CTGTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCG...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCTCACTGCCTCCGCGCTaGCAGCGCACCTTCACTCCT +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGSLPPR*QRTFTP
Trigger: AGGAGTGAAGGTGCGCTGGCAGCGCGGAGGCAGTGA...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCTCAGCGTATGCCGTGTaGCCTCTGTGGCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPSAYAV*PLWPGR
Trigger: ACGGCCTGGCCACAGAGGGCACACGGCATACGCTGA...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACGGCCAGCATGGGCTCTaGCTTCTCTGCCTCTATGAC +
Preference number: 4 (lower is better)
Translates to: AIQASCSHALWGPPLEGDGQHGL*LLCLYD
Trigger: GTCATAGAGGCAGAGAAGGCAGAGCCCATGCTGGCC...GTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCGGTGCTGGCCCACCTTaGTGCTCAGGTCCACCCATT +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSGAGPP*CSGPPI
Trigger: AATGGGTGGACCTGAGCAGCAAGGTGGGCCAGCACC...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCTCGTGCAGCTGCAGGTaGTGGCCCACCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLASCSCR*WPTLLL
Trigger: GAGCAGCAAGGTGGGCCAGCACCTGCAGCTGCACGA...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCTCAGATGGGGGTGCCTaGCGTAGGATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSSDGGA*RRISHT
Trigger: CGTGTGGGAGATCCTACGGCAGGCACCCCCATCTGA...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACGGATCTTGTGGCCTTTaGTCACCTGGTAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: AIQASCSHALWGPPLEGDGSCGL*SPGRPA
Trigger: AGCCGGCCTACCAGGTGAGCAAAGGCCACAAGATCC...GTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCCGCTAGTGCACAGTaGATAGTGCCCCGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGPASAQ*IVPRVL
Trigger: GAGGACGCGGGGCACTATGCACTGTGCACTAGCGGG...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCGCTTGGCTGACAGGTTaGAGGCGAAGCCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPAWLTG*RRSPRA
Trigger: TGCCCGAGGGCTTCGCCTGCAACCTGTCAGCCAAGC...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCGCTTGGCTGACAGGTTaGAGGCGAAGCCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGAWLTG*RRSPRA
Trigger: TGCCCGAGGGCTTCGCCTGCAACCTGTCAGCCAAGC...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGCCACGCCCTCGATCATaGGCCGCGCTTCATGACTCA +
Preference number: 4 (lower is better)
Translates to: AVAIQASCSHALWGPPLEPRPRS*AALHDS
Trigger: TGAGTCATGAAGCGCGGCGCATGATCGAGGGCGTGG...CTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATGCCATCCAGGCCTCCTaGTCCCACGCGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HADGVDRVDAHLVHHALDAIQAS*SHALWG
Trigger: CCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCTGCTCTGTCAGCCCCTaGAGGGCAGCCACCCACTCT +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPCSVSP*RAATHS
Trigger: AGAGTGGGTGGCTGCCCTGCAGGGGCTGACAGAGCA...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCTGCTCTGTCAGCCCCTaGAGGGCAGCCACCCACTCT +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGCSVSP*RAATHS
Trigger: AGAGTGGGTGGCTGCCCTGCAGGGGCTGACAGAGCA...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGGGCTCCAGGCCCTaGCATATTGTGTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPRGSRP*HIVCPH
Trigger: GTGCGGGCACACAATATGGCAGGGCCTGGAGCCCCT...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCAGGGGCTCCAGGCCCTaGCATATTGTGTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLARGSRP*HIVCPH
Trigger: GTGCGGGCACACAATATGGCAGGGCCTGGAGCCCCT...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCCGTTGCAGGATCTCCTaGACTGTCACCGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSRCRIS*TVTGSV
Trigger: CACGGAGCCGGTGACAGTGCAGGAGATCCTGCAACG...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCATGGGGCTGTTGCGGATaGTCACCTCCTCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPWGCCG*SPPRLP
Trigger: TGGCAGGCGAGGAGGTGAGCATCCGCAACAGCCCCA...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCCCCTGCAGACATAGATaGCCCCGTCAAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSPCRHR*PRQRGR
Trigger: CCTGCCCCTTTGACGGGGGCATCTATGTCTGCAGGG...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCGGACTGCCCGACAACTaGCCTGCTGATCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPGLPDN*PADPPS
Trigger: CGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCC...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCGCCGTGTGCCCTCTGTaGCCAGGCCGTACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAAVCPL*PGRTCC
Trigger: GCAACAAGTACGGCCTGGCCACAGAGGGCACACGGC...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCATGCAGCTGCAGGTGCTaGCCCACCTTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPCSCRC*PTLLLR
Trigger: CCTGAGCAGCAAGGTGGGCCAGCACCTGCAGCTGCA...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCTGGACCCGCCCGATGTaGGACACCTTTATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSWTRPM*DTFMRL
Trigger: CAGCCGCATAAAGGTGTCCCACATCGGGCGGGTCCA...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CACGCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTTGGACCCGCCCGATGTaGGACACCTTTATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: HAVAIQASCSHALWGPPLWTRPM*DTFMRL
Trigger: CAGCCGCATAAAGGTGTCCCACATCGGGCGGGTCCA...AAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCGTCACCTGTGTCCTCTaGGGCATCTGGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAVTCVL*GIWGWP
Trigger: AGGCCAGCCCCAGATGCCCCAGAGGACACAGGTGAC...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACACTGTGAGGTTGACCTaGTCCTCGCCCACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: AIQASCSHALWGPPLEGDTVRLT*SSPTGF
Trigger: GAACCCTGTGGGCGAGGACCAGGTCAACCTCACAGT...GTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCGGGCAGCTGAAGCCGTaGCCGTTGCAGGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGGQLKP*PLQDLL
Trigger: CAGGAGATCCTGCAACGGCCACGGCTTCAGCTGCCC...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
3UTR CAA 72 bp AGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTaGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACT +
Preference number: 4 (lower is better)
Translates to: RPPAPTRSGGRH*RETVVSETSST
Trigger: AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCCAGGCTGGGCATCGGTaGTGTGCAGCTCGAACAGAT +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSQAGHR*CAARTD
Trigger: ATCTGTTCGAGCTGCACATCACCGATGCCCAGCCTG...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGCCTCGTCGGCAGGTGTaGCGTCGTCAATGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: AVAIQASCSHALWGPPLEPRRQV*RRQWSV
Trigger: AACTGACCATTGACGACGTCACACCTGCCGACGAGG...CTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCGAAGTGGAGCTTGGCTaGCAGGTTGCAGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGEVELG*QVAGEA
Trigger: GGCTTCGCCTGCAACCTGTCAGCCAAGCTCCACTTC...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTCTCCCACGTTGCTaGTCTTGGGGGCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVPLPRC*SWGPQV
Trigger: CACCTGCGGCCCCCAAGATCAGCAACGTGGGAGAGG...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGCCTCTCCCACGTTGCTaGTCTTGGGGGCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQPLPRC*SWGPQV
Trigger: CACCTGCGGCCCCCAAGATCAGCAACGTGGGAGAGG...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAACATGCCGATGGCGTTaGCCGCGTAGACGCGCATCT +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPTCRWR*PRRRAS
Trigger: AGATGCGCGTCTACGCGGTCAACGCCATCGGCATGT...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCACATGCCGATGGCGTTaGCCGCGTAGACGCGCATCT +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPTCRWR*PRRRAS
Trigger: AGATGCGCGTCTACGCGGTCAACGCCATCGGCATGT...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCACACTCCCTGCTTGCTaGACATGCGGAAGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLATLPAC*TCGSGR
Trigger: ACGCCCGCTTCCGCATGTTCAGCAAGCAGGGAGTGT...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAAGCCAGCCTGGTCACTaGGGCACTCGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVSQPGH*GTRTSR
Trigger: CCTGGAGGTGCGAGTGCCTCAGTGACCAGGCTGGCT...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGCGAACACGGCAGGGCTaGCTGCGGCCACTTCCACTG +
Preference number: 4 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQRTRQG*LRPLPL
Trigger: CAGTGGAAGTGGCCGCAGGCAGCCCTGCCGTGTTCG...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCGGGCTCTGCCTTCTCTaGCTCTATGACCTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVGLCLL*LYDLEV
Trigger: GACCTCAAGGTCATAGAGGCAGAGAAGGCAGAGCCC...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCGGTGCTGGCCCACCTTaGTGCTCAGGTCCACCCATT +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPGAGPP*CSGPPI
Trigger: AATGGGTGGACCTGAGCAGCAAGGTGGGCCAGCACC...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGGTCCAGGTCTCCGGTaGCCATGGCCTCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: RSGGRHLRETVVSETSSTGPGLR*PWPRGQ
Trigger: CTGTCCACGAGGCCATGGGCACCGGAGACCTGGACC...AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCGTCCTCCTCTGCTGGTaGCTCCAGCTTCGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAVLLCW*LQLRVP
Trigger: AGGGACTCGAAGCTGGAGGCACCAGCAGAGGAGGAC...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCGTCCTCCTCTGCTGGTaGCTCCAGCTTCGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGVLLCW*LQLRVP
Trigger: AGGGACTCGAAGCTGGAGGCACCAGCAGAGGAGGAC...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCCACACGTCCTCCTCTaGTGGTGCCTCCAGCTTCGA +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPPHVLL*WCLQLR
Trigger: TCGAAGCTGGAGGCACCAGCAGAGGAGGACGTGTGG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCACCACACGTCCTCCTCTaGTGGTGCCTCCAGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPPHVLL*WCLQLR
Trigger: TCGAAGCTGGAGGCACCAGCAGAGGAGGACGTGTGG...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCGGATCTTGTGGCCTTTaGTCACCTGGTAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSGSCGL*SPGRPA
Trigger: AGCCGGCCTACCAGGTGAGCAAAGGCCACAAGATCC...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCATCAGGTGGTGTCTCTaGCCGTCCTTCTTGAACCGG +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVIRWCL*PSFLNR
Trigger: CCGGTTCAAGAAGGACGGGCAGAGACACCACCTGAT...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCTGTGGGACACCTTTATaGGGCTGTCGGGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSCGTPL*GCRAPA
Trigger: AGCTGGTGCCCGACAGCCGCATAAAGGTGTCCCACA...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCGCTTGGCTGACAGGTTaGAGGCGAAGCCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLAWLTG*RRSPRA
Trigger: TGCCCGAGGGCTTCGCCTGCAACCTGTCAGCCAAGC...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp GCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGCAATGGTGTCTGGTATaGGGCCTGGGCAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AVAIQASCSHALWGPPLEQWCLV*GLGSPG
Trigger: ACCTGGACTGCCCAGGCCGCATACCAGACACCATTG...CTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCGGGGCCTTATTCCCCTaGGTGATAGCCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSGALFP*VIAFCQ
Trigger: CTGGCAGAAGGCTATCACGCAGGGGAATAAGGCCCC...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGCTTGGGGGCCGCAGGTaGGTCTGGCACGTCGATGAC +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQLGGRR*VWHVDD
Trigger: GTCATCGACGTGCCAGACGCACCTGCGGCCCCCAAG...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACTTGGGGGCCGCAGGTaGGTCTGGCACGTCGATGAC +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVLGGRR*VWHVDD
Trigger: GTCATCGACGTGCCAGACGCACCTGCGGCCCCCAAG...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCAGAGACGTCCTCTACTaGCAGGTGGGTGGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSRDVLY*QVGGFA
Trigger: AGCGAACCCACCCACCTGGCAGTAGAGGACGTCTCT...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCACCGTCACCTGGTAAGTaGCTGAATGCACGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPPSPGK*LNARGE
Trigger: CTCGCCGCGTGCATTCAGGCACTTACCAGGTGACGG...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCGCACCACGCAGTGGGTaGGGCGGTAATGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAAPRSG*GGNAPR
Trigger: TCTTGGAGCATTACCGCCGCACCCACTGCGTGGTGC...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCGCACCACGCAGTGGGTaGGGCGGTAATGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPAPRSG*GGNAPR
Trigger: TCTTGGAGCATTACCGCCGCACCCACTGCGTGGTGC...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp ACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTGCCGTGTGCCCTCTGTaGCCAGGCCGTACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: TRSGGRHLRETVVSETSSAVCPL*PGRTCC
Trigger: GCAACAAGTACGGCCTGGCCACAGAGGGCACACGGC...AGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAGGGCAGGGGCCAGCATaGGCTCTGCCTTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVGQGPA*ALPSLP
Trigger: AGGCAGAGAAGGCAGAGCCCATGCTGGCCCCTGCCC...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACTCCAGGGGCTCCAGTaGCCTCAGCAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPLQGLQ*PQQGQG
Trigger: CCCCTGCCCCTGCTGAGGCCACTGGAGCCCCTGGAG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCTCACGAAGAGGCCAATaGGGTCATCGGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPSRRGQ*GHRGLQ
Trigger: CTGGAGCCCCCGATGACCCCATTGGCCTCTTCGTGA...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCTCACGAAGAGGCCAATaGGGTCATCGGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGSRRGQ*GHRGLQ
Trigger: CTGGAGCCCCCGATGACCCCATTGGCCTCTTCGTGA...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCCAGTGAAGGCAGGCTaGGCATCGGTGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAPVKAG*ASVMCS
Trigger: GCTGCACATCACCGATGCCCAGCCTGCCTTCACTGG...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCCAGTGAAGGCAGGCTaGGCATCGGTGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPPVKAG*ASVMCS
Trigger: GCTGCACATCACCGATGCCCAGCCTGCCTTCACTGG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CACGCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTTCAGTGACGCCGTACTaGAAGGCGATGCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: HAVAIQASCSHALWGPPLSVTPY*KAMRSY
Trigger: GTACGAGCGCATCGCCTTCCAGTACGGCGTCACTGA...AAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGAGCTCAGCCAGCGCCTaGCCCCCGCTAGTGCACAGT +
Preference number: 4 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQSSASA*PPLVHS
Trigger: ACTGTGCACTAGCGGGGGCCAGGCGCTGGCTGAGCT...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCATGGACCCGCCCGATGTaGGACACCTTTATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPWTRPM*DTFMRL
Trigger: CAGCCGCATAAAGGTGTCCCACATCGGGCGGGTCCA...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCGTCACCTGTGTCCTCTaGGGCATCTGGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLVTCVL*GIWGWP
Trigger: AGGCCAGCCCCAGATGCCCCAGAGGACACAGGTGAC...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCACTGTGAGGTTGACCTaGTCCTCGCCCACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSTVRLT*SSPTGF
Trigger: GAACCCTGTGGGCGAGGACCAGGTCAACCTCACAGT...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACTCTGGCGCAGGTGCCTaGGCAGCTGAAGCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHSGAGA*AAEAVA
Trigger: GGCCACGGCTTCAGCTGCCCAGGCACCTGCGCCAGA...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGCCGGGGCTTGCCCTaGAAAGGGATGAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPGRGLP*KGMRRF
Trigger: GAACCTTCTCATCCCTTTCCAGGGCAAGCCCCGGCC...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCGGCCGGGGCTTGCCCTaGAAAGGGATGAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPGRGLP*KGMRRF
Trigger: GAACCTTCTCATCCCTTTCCAGGGCAAGCCCCGGCC...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCGCCAATGATGAGCTCTaGCACCACGCAGTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPANDEL*HHAVGA
Trigger: CGCACCCACTGCGTGGTGCCAGAGCTCATCATTGGC...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACTCCTGGCACGGGGCTaGCATCCGGTTGTACCTGGC +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVLLARG*HPVVPG
Trigger: GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAG...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCCCTTCAGGAGCCCTGTaGACCAGTCTGTGCAACACC +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSPSGAL*TSLCNT
Trigger: GGTGTTGCACAGACTGGTCCACAGGGCTCCTGAAGG...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGTGCGGCCACTTCCACTaGCCGTGGCTTCTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: AVAIQASCSHALWGPPLECGHFH*PWLLAK
Trigger: TTTAGCAAGAAGCCACGGTCAGTGGAAGTGGCCGCA...CTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp GCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGTGGAGGAGCCAGCAATaGCTGCGTAAGATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: AVAIQASCSHALWGPPLEWRSQQ*LRKIPG
Trigger: ACCAGGGATCTTACGCAGTCATTGCTGGCTCCTCCA...CTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATCTGCCCCCTCGACCGTaGAGATGCTGCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HADGVDRVDAHLVHHALDLPPRP*RCCGPW
Trigger: CCAAGGACCGCAGCATCTTCACGGTCGAGGGGGCAG...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACTGGGGGCCGCCACTTaGGGGAGACCGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPLGAAT*GRPWCQ
Trigger: CTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCAGGTGCCTGGGCAGCTaGAGCCGTGGCCGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIRCLGS*SRGRCR
Trigger: CCTGCAACGGCCACGGCTTCAGCTGCCCAGGCACCT...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACCACCTGGTAAGTGCCTaGATGCACGCGGCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHHLVSA*MHAASG
Trigger: GCCGCTCGCCGCGTGCATTCAGGCACTTACCAGGTG...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGCGCACTGTCAGCGTATaGCGTGTGCCCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQRTVSV*RVPSVA
Trigger: GGCCACAGAGGGCACACGGCATACGCTGACAGTGCG...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp ACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTGCTGGCCCACCTTGCTaGTCAGGTCCACCCATTTGC +
Preference number: 4 (lower is better)
Translates to: TRSGGRHLRETVVSETSSAGPPC*SGPPIC
Trigger: GCAAATGGGTGGACCTGAGCAGCAAGGTGGGCCAGC...AGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGTCGTGCAGCTGCAGGTaGTGGCCCACCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQSCSCR*WPTLLL
Trigger: GAGCAGCAAGGTGGGCCAGCACCTGCAGCTGCACGA...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCCCACACGTCCTCCTCTaGTGGTGCCTCCAGCTTCGA +
Preference number: 4 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLPHVLL*WCLQLR
Trigger: TCGAAGCTGGAGGCACCAGCAGAGGAGGACGTGTGG...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCGTACTGGAAGGCGATaGGCTCGTACTCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPRTGRR*ARTQMG
Trigger: CCCCATCTGAGTACGAGCGCATCGCCTTCCAGTACG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCACGTACTGGAAGGCGATaGGCTCGTACTCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPRTGRR*ARTQMG
Trigger: CCCCATCTGAGTACGAGCGCATCGCCTTCCAGTACG...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCGCTCCCACTGTACTGTaGAGGAGTCCTCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGAPTVL*RSPLPR
Trigger: ACGTGGGAGAGGACTCCTGCACAGTACAGTGGGAGC...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCACCAGTATCGATGTGTaGTCTGTCAGCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSTSIDV*SVSPCR
Trigger: CCTGCAGGGGCTGACAGAGCACACATCGATACTGGT...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCCCCTGCCATATTGTGTaGCCGCACTCGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSPCHIV*PHSEKQ
Trigger: CTGCTTTTCCGAGTGCGGGCACACAATATGGCAGGG...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCCAGAGCTCCGTGTTaGCGACATCCTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVPRAPC*RHPGVA
Trigger: AGCCACCCCAGGATGTCGGCAACACGGAGCTCTGGG...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCTCACGAAGAGGCCAATaGGGTCATCGGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLSRRGQ*GHRGLQ
Trigger: CTGGAGCCCCCGATGACCCCATTGGCCTCTTCGTGA...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGCACCTCGCCATCCTGTaGCCGCATCACGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQHLAIL*PHHEEA
Trigger: GGCCTCTTCGTGATGCGGCCACAGGATGGCGAGGTG...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp CGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTTGCAGCTGCAGGTGCTaGCCCACCTTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RSGGRHLRETVVSETSSTCSCRC*PTLLLR
Trigger: CCTGAGCAGCAAGGTGGGCCAGCACCTGCAGCTGCA...AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACCCCACCATCACCAGCTaGTCCTCCAAGGGGCGCGTG +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHPTITS*SSKGRV
Trigger: CACGCGCCCCTTGGAGGACCAGCTGGTGATGGTGGG...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGGGTGGGCCCACCATCACCAGCTaGTCCTCCAAGGGGCGCGTG +
Preference number: 4 (lower is better)
Translates to: PLEGDRGVRDVLYCQVGGPTITS*SSKGRV
Trigger: CACGCGCCCCTTGGAGGACCAGCTGGTGATGGTGGG...CCCACCCACCTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACAGCTCAGCCAGCGCCTaGCCCCCGCTAGTGCACAGT +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHSSASA*PPLVHS
Trigger: ACTGTGCACTAGCGGGGGCCAGGCGCTGGCTGAGCT...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CACGCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTTCAATGGTCAGTTTGTaGACCCGCCCGATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: HAVAIQASCSHALWGPPLSMVSL*TRPMWD
Trigger: GTCCCACATCGGGCGGGTCCACAAACTGACCATTGA...AAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp ACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTCCTGGGCAGTCCAGGTaGATCTTGGGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TRSGGRHLRETVVSETSSPGQSR*ILGGSC
Trigger: GCAGGAACCTCCCAAGATCCACCTGGACTGCCCAGG...AGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATTGGGGCTGGCCTGGCTaGGGCCTTATTCCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: HADGVDRVDAHLVHHALDWGWPG*GLIPLR
Trigger: ACGCAGGGGAATAAGGCCCCAGCCAGGCCAGCCCCA...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGTGCTGCGGTCCTTGGTaGTCTCCACGCGGACCCGGC +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLCCGPW*SPRGPG
Trigger: GCCGGGTCCGCGTGGAGACCACCAAGGACCGCAGCA...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGGCCGCAGGTGCGTCTaGCACGTCGATGACCTTGAC +
Preference number: 4 (lower is better)
Translates to: RSGGRHLRETVVSETSSTGRRCV*HVDDLD
Trigger: GTCAAGGTCATCGACGTGCCAGACGCACCTGCGGCC...AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCTGCTCCCACGCGCTCTaGGGGCCGCCACTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLICSHAL*GPPLEG
Trigger: TCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCA...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCGCAGCCGGGCCCCCGTaGGCAGGTCCTTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIAAGPP*AGPSPV
Trigger: TACTGGTGAAGGACCTGCCCACGGGGGCCCGGCTGC...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCTCTGGCGCAGGTGCCTaGGCAGCTGAAGCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLISGAGA*AAEAVA
Trigger: GGCCACGGCTTCAGCTGCCCAGGCACCTGCGCCAGA...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCGACCTTCTTCTGAATaGTCTGGCGCAGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPRPSSE*SGAGAW
Trigger: CCAGGCACCTGCGCCAGACCATTCAGAAGAAGGTCG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACCCGGCTCAGGCATCCTaGGAGACGTCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHPAQAS*ETSHQA
Trigger: TGCCTGGTGTGACGTCTCTCAGGATGCCTGAGCCGG...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCATGGAGGAGCCAGCAATaGCTGCGTAAGATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPWRSQQ*LRKIPG
Trigger: ACCAGGGATCTTACGCAGTCATTGCTGGCTCCTCCA...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGCCGGCCACGCGGGCTaGGAAGGTGATGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSAGHAG*EGDAAT
Trigger: GGTGGCAGCATCACCTTCTCAGCCCGCGTGGCCGGC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATCGTCCTTCAGCCATTTaGCTTGCGCCCCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: HADGVDRVDAHLVHHALDRPSAI*LAPPPP
Trigger: CGGAGGAGGGGGCGCAAGTCAAATGGCTGAAGGACG...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGACATGCCGATGGCGTTaGCCGCGTAGACGCGCATCT +
Preference number: 4 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQTCRWR*PRRRAS
Trigger: AGATGCGCGTCTACGCGGTCAACGCCATCGGCATGT...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACCGACAACTGCCCTGCTaGTCCCCCATCGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHRQLPC*SPIAAQ
Trigger: CTGTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCG...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGGGTGGGATGCGCCGCGCTTCATaGCTCAGCTCCCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: PLEGDRGVRDVLYCQVGGMRRAS*LSSQDG
Trigger: CCCATCCTGGGAGCTGAGTCATGAAGCGCGGCGCAT...CCCACCCACCTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATTCACTGCCTCCGCGCTaGCAGCGCACCTTCACTCCT +
Preference number: 4 (lower is better)
Translates to: HADGVDRVDAHLVHHALDSLPPR*QRTFTP
Trigger: AGGAGTGAAGGTGCGCTGGCAGCGCGGAGGCAGTGA...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGGGTCCAGGTCTCCGGTaGCCATGGCCTCGTGGACAG +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLGPGLR*PWPRGQ
Trigger: CTGTCCACGAGGCCATGGGCACCGGAGACCTGGACC...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGGGTGGGCTCCAGCCAGGCTCGTaGGGCGGAAGGCTGATAGGA +
Preference number: 4 (lower is better)
Translates to: PLEGDRGVRDVLYCQVGGLQPGS*GGRLIG
Trigger: TCCTATCAGCCTTCCGCCGCACGAGCCTGGCTGGAG...CCCACCCACCTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCATCAGGTGGTGTCTCTaGCCGTCCTTCTTGAACCGG +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGIRWCL*PSFLNR
Trigger: CCGGTTCAAGAAGGACGGGCAGAGACACCACCTGAT...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCTCCAGCTTCTTTTCCTaGACAATGAGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVSSFFS*TMSSAS
Trigger: GCTGGCTGAGCTCATTGTGCAGGAAAAGAAGCTGGA...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACGCTTGGCTGACAGGTTaGAGGCGAAGCCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHAWLTG*RRSPRA
Trigger: TGCCCGAGGGCTTCGCCTGCAACCTGTCAGCCAAGC...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCATCTTGGGAGGTTCCTaGCTGGGTACGAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVILGGS*LGTKSI
Trigger: GATTGACTTCGTACCCAGGCAGGAACCTCCCAAGAT...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCGGGGCCTTATTCCCCTaGGTGATAGCCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLGALFP*VIAFCQ
Trigger: CTGGCAGAAGGCTATCACGCAGGGGAATAAGGCCCC...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGCCATCCAGGCCTCCTaGTCCCACGCGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSAIQAS*SHALWG
Trigger: CCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCACCAGTATCGATGTGTaGTCTGTCAGCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPTSIDV*SVSPCR
Trigger: CCTGCAGGGGCTGACAGAGCACACATCGATACTGGT...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCCCTGCCATATTGTGTaGCCGCACTCGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPPCHIV*PHSEKQ
Trigger: CTGCTTTTCCGAGTGCGGGCACACAATATGGCAGGG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCCTGCCAGGGGCTaGCCCTCTTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPSPARG*PSLVQV
Trigger: GACCTGGACCAAAGAGGGGCAGCCCCTGGCAGGCGA...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCCCTCCATGTTCTCAATaGGCACCGTCACCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSPPCSQ*APSPGK
Trigger: CTTACCAGGTGACGGTGCGCATTGAGAACATGGAGG...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCTTCTTGTCGGCTTTCTaGACTGTGTACCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSFLSAF*TVYPQS
Trigger: GCTCTGGGGGTACACAGTGCAGAAAGCCGACAAGAA...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCTGTGGACCAGTCTGTaGAACACCCACTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPLWTSL*NTHSGL
Trigger: CAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACAG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCCTCCAGGGGCTCCAGTaGCCTCAGCAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSLQGLQ*PQQGQG
Trigger: CCCCTGCCCCTGCTGAGGCCACTGGAGCCCCTGGAG...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCATCCCAGTGTCCTCATaGCTATCACTGATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSIPVSS*LSLIRR
Trigger: TCGGCGGATCAGTGATAGCCATGAGGACACTGGGAT...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCTTGACCTCAGCGTCATaGTCAGCCAGTTCCACGGTC +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLALTSAS*SASSTV
Trigger: GACCGTGGAACTGGCTGACCATGACGCTGAGGTCAA...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCTGGTCAGGGTACGCTTaGCACCGATGGACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSWSGYA*HRWTQR
Trigger: TCTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCA...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCACATTTGAACACCGCCTaGTCCTTTGCGCCCACCATC +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPHLNTA*SFAPTI
Trigger: GATGGTGGGCGCAAAGGACCAGGCGGTGTTCAAATG...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCATCAATGGTCAGTTTGTaGACCCGCCCGATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPSMVSL*TRPMWD
Trigger: GTCCCACATCGGGCGGGTCCACAAACTGACCATTGA...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCTCAATGGTCAGTTTGTaGACCCGCCCGATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLASMVSL*TRPMWD
Trigger: GTCCCACATCGGGCGGGTCCACAAACTGACCATTGA...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCACAGGATGGTGTCTGTaGGGCTGTTGCGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLATGWCL*GCCGCS
Trigger: TGAGCATCCGCAACAGCCCCACAGACACCATCCTGT...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACGCCGACATCCTGGGGTaGCTTCCACTCCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHADILG*LPLQSH
Trigger: GTGGCTCTGGAGTGGAAGCCACCCCAGGATGTCGGC...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCGCCCTGTAAGTTGGTaGCCCTGCAGACATAGATGC +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPRPVSW*PCRHRC
Trigger: GCATCTATGTCTGCAGGGCCACCAACTTACAGGGCG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCTTGCTGCCGCTCATCTaGATCTCCTGGCCATTCTTG +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSLLPLI*ISWPFL
Trigger: CAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAA...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGCAGGCTGGGCATCGGTaGTGTGCAGCTCGAACAGAT +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQQAGHR*CAARTD
Trigger: ATCTGTTCGAGCTGCACATCACCGATGCCCAGCCTG...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCGCGCCTCATGCCCTTaGGCCTCTTTAGCATGCCGC +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIRASCP*ASLACR
Trigger: GCGGCATGCTAAAGAGGCTCAAGGGCATGAGGCGCG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCTGAGACCTCACATTTaGACACCGCCTGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPLRPHI*TPPGPL
Trigger: CAAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACTCCCCGACCTTCTTCTaGATGGTCTGGCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHSPTFF*MVWRRC
Trigger: GCACCTGCGCCAGACCATTCAGAAGAAGGTCGGGGA...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGCGCACTGTCAGCGTATaGCGTGTGCCCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLRTVSV*RVPSVA
Trigger: GGCCACAGAGGGCACACGGCATACGCTGACAGTGCG...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGGAGCCAGCAATGACTaGGTAAGATCCCTGGTCGGC +
Preference number: 4 (lower is better)
Translates to: RSGGRHLRETVVSETSSTGASND*VRSLVG
Trigger: GCCGACCAGGGATCTTACGCAGTCATTGCTGGCTCC...AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACGCTGGCCCACCTTGCTaGTCAGGTCCACCCATTTGC +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHAGPPC*SGPPIC
Trigger: GCAAATGGGTGGACCTGAGCAGCAAGGTGGGCCAGC...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TACAGGCGTAAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGGTGCTGGCCCACCTTaGTGCTCAGGTCCACCCATT +
Preference number: 4 (lower is better)
Translates to: YRRKPSRLAALWAVLHAVGAGPP*CSGPPI
Trigger: AATGGGTGGACCTGAGCAGCAAGGTGGGCCAGCACC...TACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTTACGCCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGTGCAGCTGCAGGTaGTGGCCCACCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPSCSCR*WPTLLL
Trigger: GAGCAGCAAGGTGGGCCAGCACCTGCAGCTGCACGA...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGGTCCGGAAACTGCTaGTCTTTTTCAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPGSGNC*SFSAVS
Trigger: GCTCACTGCTGAAAAAGAGCAGCAGTTTCCGGACCC...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256993.8
ENST00000399249.6
CDS-3UTR GCA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGCGTACTGGAAGGCGATaGGCTCGTACTCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQRTGRR*ARTQMG
Trigger: CCCCATCTGAGTACGAGCGCATCGCCTTCCAGTACG...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAGGATCTTGTGGCCTTTaGTCACCTGGTAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVGSCGL*SPGRPA
Trigger: AGCCGGCCTACCAGGTGAGCAAAGGCCACAAGATCC...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCTCACAAAGAGCTCCGTaGTACACTTCTCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPSQRAP*YTSRHP
Trigger: TGGGTGGCGAGAAGTGTAGCACGGAGCTCTTTGTGA...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCTCACAAAGAGCTCCGTaGTACACTTCTCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLASQRAP*YTSRHP
Trigger: TGGGTGGCGAGAAGTGTAGCACGGAGCTCTTTGTGA...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACCCGCTAGTGCACAGTaGATAGTGCCCCGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPPASAQ*IVPRVL
Trigger: GAGGACGCGGGGCACTATGCACTGTGCACTAGCGGG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCTCATCTTCCTTCTCTaGCCCCTCGACCGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLALIFLL*PLDRED
Trigger: ATCTTCACGGTCGAGGGGGCAGAGAAGGAAGATGAG...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCTCCCACTGTACTGTaGAGGAGTCCTCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: RSGGRHLRETVVSETSSTAPTVL*RSPLPR
Trigger: ACGTGGGAGAGGACTCCTGCACAGTACAGTGGGAGC...AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGAGAGACGTCCTCTACTaGCAGGTGGGTGGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQRDVLY*QVGGFA
Trigger: AGCGAACCCACCCACCTGGCAGTAGAGGACGTCTCT...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCAGGGGCTCCAGGCCCTaGCATATTGTGTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIRGSRP*HIVCPH
Trigger: GTGCGGGCACACAATATGGCAGGGCCTGGAGCCCCT...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAGGCTTGTCAACAACCTaGAGCACCAGCGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVGLSTT*STSVAL
Trigger: CAAGGCCACGCTGGTGCTGCAGGTTGTTGACAAGCC...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCTTCTTGTCGGCTTTCTaGACTGTGTACCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAFLSAF*TVYPQS
Trigger: GCTCTGGGGGTACACAGTGCAGAAAGCCGACAAGAA...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATGCAGCTGCAGGTGCTaGCCCACCTTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPCSCRC*PTLLLR
Trigger: CCTGAGCAGCAAGGTGGGCCAGCACCTGCAGCTGCA...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGGGTGGGCCAGTGAAGGCAGGCTaGGCATCGGTGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PLEGDRGVRDVLYCQVGGPVKAG*ASVMCS
Trigger: GCTGCACATCACCGATGCCCAGCCTGCCTTCACTGG...CCCACCCACCTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGTCAAATTTGTCCTTaGTGGACACCTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVSQICP*WTPHSG
Trigger: ACCGCTGTGAGGTGTCCACCAAGGACAAATTTGACT...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCGTGCCCATGGCCTCGTaGACAGTGAGATTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPVPMAS*TVRLKL
Trigger: CAACTTCAATCTCACTGTCCACGAGGCCATGGGCAC...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCTGGTCAGGGTACGCTTaGCACCGATGGACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPWSGYA*HRWTQR
Trigger: TCTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCA...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGTCCGCCAATGAGCACTaGCTGATGGTCAGGGTACGC +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQSANEH*LMVRVR
Trigger: GCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGA...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp ACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTCATTTGAACACCGCCTaGTCCTTTGCGCCCACCATC +
Preference number: 4 (lower is better)
Translates to: TRSGGRHLRETVVSETSSHLNTA*SFAPTI
Trigger: GATGGTGGGCGCAAAGGACCAGGCGGTGTTCAAATG...AGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp CGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGTCTGGTATGCGGCCTaGGCAGTCCAGGTGGATCTT +
Preference number: 4 (lower is better)
Translates to: RSGGRHLRETVVSETSSTVWYAA*AVQVDL
Trigger: AAGATCCACCTGGACTGCCCAGGCCGCATACCAGAC...AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCGGGCAGCTGAAGCCGTaGCCGTTGCAGGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIGQLKP*PLQDLL
Trigger: CAGGAGATCCTGCAACGGCCACGGCTTCAGCTGCCC...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCATCCTGGGGAGGACTTaGCTTGTCAACAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPILGRT*LVNNLQ
Trigger: CTGCAGGTTGTTGACAAGCCAAGTCCTCCCCAGGAT...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAGTCACCCGGAGATCCTaGGGAGGACTTGGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVVTRRS*GGLGLS
Trigger: TGACAAGCCAAGTCCTCCCCAGGATCTCCGGGTGAC...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAGTGTTGCCGACATCCTaGGGTGGCTTCCACTCCAGA +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVVLPTS*GGFHSR
Trigger: TCTGGAGTGGAAGCCACCCCAGGATGTCGGCAACAC...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCACTCATAGGTGATGCCTaGTCTGGGGATAAAGACGGG +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPLIGDA*SGDKDG
Trigger: CCCGTCTTTATCCCCAGACCAGGCATCACCTATGAG...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCTCATAGGTGATGCCTaGTCTGGGGATAAAGACGGG +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLALIGDA*SGDKDG
Trigger: CCCGTCTTTATCCCCAGACCAGGCATCACCTATGAG...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCGGGCTGGGTGAAGCTTaGGGCCTCGGAGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIGLGEA*GLGEVQ
Trigger: CTGGACTTCTCCGAGGCCCCAAGCTTCACCCAGCCC...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTTCAGGAGCCCTGTaGACCAGTCTGTGCAACACC +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVPSGAL*TSLCNT
Trigger: GGTGTTGCACAGACTGGTCCACAGGGCTCCTGAAGG...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCTTGCTGCCGCTCATCTaGATCTCCTGGCCATTCTTG +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLALLPLI*ISWPFL
Trigger: CAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAA...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCTACGCTTGGCACCGATaGACTCAAAGATGTACTTGC +
Preference number: 4 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVYAWHR*TQRCTC
Trigger: GCAAGTACATCTTTGAGTCCATCGGTGCCAAGCGTA...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCGCCGGCCACGCGGGCTaGGAAGGTGATGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPAGHAG*EGDAAT
Trigger: GGTGGCAGCATCACCTTCTCAGCCCGCGTGGCCGGC...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCTTTTCAGCAGTGAGCTaGAGTCCAGAATCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSFSAVS*SPESQC
Trigger: ACACTGGGATTCTGGACTTCAGCTCACTGCTGAAAA...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGGGTGGGCCAATGAGCACTGGCTaGTGGTCAGGGTACGCTTGG +
Preference number: 4 (lower is better)
Translates to: PLEGDRGVRDVLYCQVGGPMSTG*WSGYAW
Trigger: CCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGG...CCCACCCACCTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp TACAGGCGTAAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTATCTTTTCCTGCACAATaGGCTCAGCCAGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: YRRKPSRLAALWAVLHAVSFPAQ*AQPAPG
Trigger: GCCAGGCGCTGGCTGAGCTCATTGTGCAGGAAAAGA...TACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTTACGCCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACTCTTTTCCTGCACAATaGGCTCAGCCAGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHSFPAQ*AQPAPG
Trigger: GCCAGGCGCTGGCTGAGCTCATTGTGCAGGAAAAGA...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACAGGGTTCTTCACTGTaGCCGTGTAGACGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVQGSSL*PCRRPH
Trigger: ATGAGGGCGTCTACACGGTCACAGTGAAGAACCCTG...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCCCCGACCTTCTTCTaGATGGTCTGGCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPSPTFF*MVWRRC
Trigger: GCACCTGCGCCAGACCATTCAGAAGAAGGTCGGGGA...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCAACCATATTCTGGCTaGAGACGCGGAAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAQPYSG*RRGSSS
Trigger: GCTACTACTTCCGCGTCTTCAGCCAGAATATGGTTG...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCACAACCATATTCTGGCTaGAGACGCGGAAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPQPYSG*RRGSSS
Trigger: GCTACTACTTCCGCGTCTTCAGCCAGAATATGGTTG...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCCGAACACGGCAGGGCTaGCTGCGGCCACTTCCACTG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSRTRQG*LRPLPL
Trigger: CAGTGGAAGTGGCCGCAGGCAGCCCTGCCGTGTTCG...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAGCTGGCCCACCTTGCTaGTCAGGTCCACCCATTTGC +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPAGPPC*SGPPIC
Trigger: GCAAATGGGTGGACCTGAGCAGCAAGGTGGGCCAGC...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGGCTGGCCCACCTTGCTaGTCAGGTCCACCCATTTGC +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLAGPPC*SGPPIC
Trigger: GCAAATGGGTGGACCTGAGCAGCAAGGTGGGCCAGC...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCTCAGATGGGGGTGCCTaGCGTAGGATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLISDGGA*RRISHT
Trigger: CGTGTGGGAGATCCTACGGCAGGCACCCCCATCTGA...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCTCTTCTGAAAGGCTGTaGTCTTCTTCTCATCGCGCC +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPSSERL*SSSHRA
Trigger: GGCGCGATGAGAAGAAGAGCACAGCCTTTCAGAAGA...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCTTCAGCCATTTGACTTaGGCCCCCTCCTCCGATACT +
Preference number: 4 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLFSHLT*APSSDT
Trigger: AGTATCGGAGGAGGGGGCGCAAGTCAAATGGCTGAA...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCTCCAGCTTCTTTTCCTaGACAATGAGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPSSFFS*TMSSAS
Trigger: GCTGGCTGAGCTCATTGTGCAGGAAAAGAAGCTGGA...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCTCCAGCTTCTTTTCCTaGACAATGAGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGSSFFS*TMSSAS
Trigger: GCTGGCTGAGCTCATTGTGCAGGAAAAGAAGCTGGA...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATTGTGGGACACCTTTATaGGGCTGTCGGGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: HADGVDRVDAHLVHHALDCGTPL*GCRAPA
Trigger: AGCTGGTGCCCGACAGCCGCATAAAGGTGTCCCACA...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAGCCATCCAGGCCTCCTaGTCCCACGCGCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQAIQAS*SHALWG
Trigger: CCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCGTTGCAGGATCTCCTaGACTGTCACCGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIRCRIS*TVTGSV
Trigger: CACGGAGCCGGTGACAGTGCAGGAGATCCTGCAACG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCGTCACCTGGTAAGTaGCTGAATGCACGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIPSPGK*LNARGE
Trigger: CTCGCCGCGTGCATTCAGGCACTTACCAGGTGACGG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAGCACCACGCAGTGGGTaGGGCGGTAATGCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPAPRSG*GGNAPR
Trigger: TCTTGGAGCATTACCGCCGCACCCACTGCGTGGTGC...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAACACCCACTCAGGACTaGCCGACAACTGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPTPTQD*PTTALL
Trigger: CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGT...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACTGTGGACCAGTCTGTaGAACACCCACTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVLWTSL*NTHSGL
Trigger: CAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACAG...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGACAGATAGACCTTGCTaGCGCGGTCGTAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQTDRPC*RGRSCR
Trigger: ACGACAGCTACGACCGCGCCAGCAAGGTCTATCTGT...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCATCCCAGTGTCCTCATaGCTATCACTGATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLIPVSS*LSLIRR
Trigger: TCGGCGGATCAGTGATAGCCATGAGGACACTGGGAT...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGTTGACCTCAGCGTCATaGTCAGCCAGTTCCACGGTC +
Preference number: 4 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQLTSAS*SASSTV
Trigger: GACCGTGGAACTGGCTGACCATGACGCTGAGGTCAA...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGTGGACCCGCCCGATGTaGGACACCTTTATGCGGCTG +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLWTRPM*DTFMRL
Trigger: CAGCCGCATAAAGGTGTCCCACATCGGGCGGGTCCA...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCTTGACCTCCATGAAGTaGAGCTTGGCTGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGLTSMK*SLADRL
Trigger: CAACCTGTCAGCCAAGCTCCACTTCATGGAGGTCAA...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCTGGGCAGTCCAGGTaGATCTTGGGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIPGQSR*ILGGSC
Trigger: GCAGGAACCTCCCAAGATCCACCTGGACTGCCCAGG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACGTCTGGTATGCGGCCTaGGCAGTCCAGGTGGATCTT +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHVWYAA*AVQVDL
Trigger: AAGATCCACCTGGACTGCCCAGGCCGCATACCAGAC...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGAACCACAATGGTGTCTaGTATGCGGCCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQNHNGV*YAAWAV
Trigger: GACTGCCCAGGCCGCATACCAGACACCATTGTGGTT...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCGGCCGGGGCTTGCCCTaGAAAGGGATGAGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIGRGLP*KGMRRF
Trigger: GAACCTTCTCATCCCTTTCCAGGGCAAGCCCCGGCC...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCTTGCTGCCGCTCATCTaGATCTCCTGGCCATTCTTG +
Preference number: 4 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLLLPLI*ISWPFL
Trigger: CAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAA...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACTGCGGCCACTTCCACTaGCCGTGGCTTCTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHCGHFH*PWLLAK
Trigger: TTTAGCAAGAAGCCACGGTCAGTGGAAGTGGCCGCA...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGCTGAGACCTCACATTTaGACACCGCCTGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQLRPHI*TPPGPL
Trigger: CAAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAG...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp CCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGGGTGGGCAGGGTTCTTCACTGTaGCCGTGTAGACGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PLEGDRGVRDVLYCQVGGQGSSL*PCRRPH
Trigger: ATGAGGGCGTCTACACGGTCACAGTGAAGAACCCTG...CCCACCCACCTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCTGGGGGCCGCCACTTaGGGGAGACCGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRLGAAT*GRPWCQ
Trigger: CTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAAGGTGCCTGGGCAGCTaGAGCCGTGGCCGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPRCLGS*SRGRCR
Trigger: CCTGCAACGGCCACGGCTTCAGCTGCCCAGGCACCT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGGGAGCCAGCAATGACTaGGTAAGATCCCTGGTCGGC +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLGASND*VRSLVG
Trigger: GCCGACCAGGGATCTTACGCAGTCATTGCTGGCTCC...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACGGGCTCTGCCTTCTCTaGCTCTATGACCTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHGLCLL*LYDLEV
Trigger: GACCTCAAGGTCATAGAGGCAGAGAAGGCAGAGCCC...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGGGCCAGCATGGGCTCTaGCTTCTCTGCCTCTATGAC +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLGQHGL*LLCLYD
Trigger: GTCATAGAGGCAGAGAAGGCAGAGCCCATGCTGGCC...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATCGAACAGATAGACCTTaGTGGCGCGGTCGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: HADGVDRVDAHLVHHALDRTDRP*WRGRSC
Trigger: ACAGCTACGACCGCGCCAGCAAGGTCTATCTGTTCG...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACCGAACAGATAGACCTTaGTGGCGCGGTCGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHRTDRP*WRGRSC
Trigger: ACAGCTACGACCGCGCCAGCAAGGTCTATCTGTTCG...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTTCACAAAGAGCTCCGTaGTACACTTCTCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: RSGGRHLRETVVSETSSTSQRAP*YTSRHP
Trigger: TGGGTGGCGAGAAGTGTAGCACGGAGCTCTTTGTGA...AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp TACAGGCGTAAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTACCATCAGGTCTGCGATaGTCTGGTACACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YRRKPSRLAALWAVLHAVPSGLR*SGTPPA
Trigger: AGCTGGAGGTGTACCAGAGCATCGCAGACCTGATGG...TACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTTACGCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCTGTGGGACACCTTTATaGGGCTGTCGGGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLICGTPL*GCRAPA
Trigger: AGCTGGTGCCCGACAGCCGCATAAAGGTGTCCCACA...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACAATGGTGTCTGGTATaGGGCCTGGGCAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPQWCLV*GLGSPG
Trigger: ACCTGGACTGCCCAGGCCGCATACCAGACACCATTG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTATGCGTGATAGCCTTCTaGCAGATCACAGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVCVIAF*QITVGA
Trigger: TGCTCCCACTGTGATCTGGCAGAAGGCTATCACGCA...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGGGGGCCTTATTCCCCTaGGTGATAGCCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLGALFP*VIAFCQ
Trigger: CTGGCAGAAGGCTATCACGCAGGGGAATAAGGCCCC...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCTGGGGCTGTTGCGGATaGTCACCTCCTCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSWGCCG*SPPRLP
Trigger: TGGCAGGCGAGGAGGTGAGCATCCGCAACAGCCCCA...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGCCGTGTGCCCTCTGTaGCCAGGCCGTACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSAVCPL*PGRTCC
Trigger: GCAACAAGTACGGCCTGGCCACAGAGGGCACACGGC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAAGTCAAATTTGTCCTTaGTGGACACCTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPSQICP*WTPHSG
Trigger: ACCGCTGTGAGGTGTCCACCAAGGACAAATTTGACT...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGCCCATGGCCTCGTaGACAGTGAGATTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQVPMAS*TVRLKL
Trigger: CAACTTCAATCTCACTGTCCACGAGGCCATGGGCAC...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAATCCCAGTGTCCTCATaGCTATCACTGATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVIPVSS*LSLIRR
Trigger: TCGGCGGATCAGTGATAGCCATGAGGACACTGGGAT...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGTCAGTGACGCCGTACTaGAAGGCGATGCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLSVTPY*KAMRSY
Trigger: GTACGAGCGCATCGCCTTCCAGTACGGCGTCACTGA...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCTCAGTGACGCCGTACTaGAAGGCGATGCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLISVTPY*KAMRSY
Trigger: GTACGAGCGCATCGCCTTCCAGTACGGCGTCACTGA...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCTCATCTGGATCTCCTaGCCATTCTTGAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLALIWIS*PFLSHL
Trigger: CAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAG...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTATGGTCAGGGTACGCTTaGCACCGATGGACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVWSGYA*HRWTQR
Trigger: TCTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCA...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGTCCGCCAATGAGCACTaGCTGATGGTCAGGGTACGC +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLSANEH*LMVRVR
Trigger: GCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGA...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCTTGACCTCCATGAAGTaGAGCTTGGCTGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLLTSMK*SLADRL
Trigger: CAACCTGTCAGCCAAGCTCCACTTCATGGAGGTCAA...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATAGTCCAGGTGGATCTTaGGAGGTTCCTGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: HADGVDRVDAHLVHHALDSPGGS*EVPAWV
Trigger: TACCCAGGCAGGAACCTCCCAAGATCCACCTGGACT...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGTCACCTGTGTCCTCTaGGGCATCTGGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSVTCVL*GIWGWP
Trigger: AGGCCAGCCCCAGATGCCCCAGAGGACACAGGTGAC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGTGCTGCGGTCCTTGGTaGTCTCCACGCGGACCCGGC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRCCGPW*SPRGPG
Trigger: GCCGGGTCCGCGTGGAGACCACCAAGGACCGCAGCA...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTGCTGCGGTCCTTGGTaGTCTCCACGCGGACCCGGC +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQCCGPW*SPRGPG
Trigger: GCCGGGTCCGCGTGGAGACCACCAAGGACCGCAGCA...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCAGATGCTGCGGTCCTTaGTGGTCTCCACGCGGACCC +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSRCCGP*WSPRGP
Trigger: GGGTCCGCGTGGAGACCACCAAGGACCGCAGCATCT...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGGATGTAGCCCAGGATaGGCTGCCCGCCATCGTAGG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSGCSPG*AARHRR
Trigger: CCTACGATGGCGGGCAGCCCATCCTGGGCTACATCC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTGCTCCCACGCGCTCTaGGGGCCGCCACTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQCSHAL*GPPLEG
Trigger: TCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCA...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGGGCAGCTGAAGCCGTaGCCGTTGCAGGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSGQLKP*PLQDLL
Trigger: CAGGAGATCCTGCAACGGCCACGGCTTCAGCTGCCC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAGTGTTGCCGACATCCTaGGGTGGCTTCCACTCCAGA +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPVLPTS*GGFHSR
Trigger: TCTGGAGTGGAAGCCACCCCAGGATGTCGGCAACAC...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACTCATAGGTGATGCCTaGTCTGGGGATAAAGACGGG +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVLIGDA*SGDKDG
Trigger: CCCGTCTTTATCCCCAGACCAGGCATCACCTATGAG...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAAGGAAATCTTGGGCTTaGGGCTACCCCGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPRKSWA*GYPGQH
Trigger: GTGCTGTCCGGGGTAGCCCCAAGCCCAAGATTTCCT...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACCCTCGCCCTGTAAGTTaGTGGCCCTGCAGACATAGA +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHPRPVS*WPCRHR
Trigger: TCTATGTCTGCAGGGCCACCAACTTACAGGGCGAGG...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCTTCCCTCCAGGCTCCTaGCACGGGGCTGGCATCCGG +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPFPPGS*HGAGIR
Trigger: CCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAATTCCCTCCAGGCTCCTaGCACGGGGCTGGCATCCGG +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQFPPGS*HGAGIR
Trigger: CCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATGCGGCCACTTCCACTaGCCGTGGCTTCTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPCGHFH*PWLLAK
Trigger: TTTAGCAAGAAGCCACGGTCAGTGGAAGTGGCCGCA...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAGCTCTTTTTCAGCAGTaGGCTGAAGTCCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVALFQQ*AEVQNP
Trigger: GGGATTCTGGACTTCAGCTCACTGCTGAAAAAGAGC...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256993.8
ENST00000399249.6
CDS-3UTR TCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACCTGAGACCTCACATTTaGACACCGCCTGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHLRPHI*TPPGPL
Trigger: CAAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAG...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGCTGCCCCCTCGACCGTaGAGATGCTGCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQLPPRP*RCCGPW
Trigger: CCAAGGACCGCAGCATCTTCACGGTCGAGGGGGCAG...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCTCTCCCACGTTGCTaGTCTTGGGGGCCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPPLPRC*SWGPQV
Trigger: CACCTGCGGCCCCCAAGATCAGCAACGTGGGAGAGG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCGGCAGCCACCCACTCTaGGCAGCCCTCTGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPGSHPL*AALWAV
Trigger: TACTGCCCAGAGGGCTGCTCAGAGTGGGTGGCTGCC...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGGGCAGCCACCCACTCTaGGCAGCCCTCTGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQGSHPL*AALWAV
Trigger: TACTGCCCAGAGGGCTGCTCAGAGTGGGTGGCTGCC...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAGGCGAGCGGCCCGGATaGACAGGATGGTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPGERPG*TGWCLW
Trigger: CCACAGACACCATCCTGTTCATCCGGGCCGCTCGCC...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGCACCTGGTAAGTGCCTaGATGCACGCGGCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQHLVSA*MHAASG
Trigger: GCCGCTCGCCGCGTGCATTCAGGCACTTACCAGGTG...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACACCTGGTAAGTGCCTaGATGCACGCGGCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPHLVSA*MHAASG
Trigger: GCCGCTCGCCGCGTGCATTCAGGCACTTACCAGGTG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACAGTGTAGCCCGCGATaGCCGAGCGGTTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPQCSPR*PSGSPG
Trigger: CCCTGGTGAACCGCTCGGTCATCGCGGGCTACACTG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCAGTGTAGCCCGCGATaGCCGAGCGGTTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPQCSPR*PSGSPG
Trigger: CCCTGGTGAACCGCTCGGTCATCGCGGGCTACACTG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACGGTCCAGGCCATTCTTaGACCAGGAAATCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHGPGHS*TRKSWA
Trigger: AGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGACC...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAAGCCAGCCTGGTCACTaGGGCACTCGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPSQPGH*GTRTSR
Trigger: CCTGGAGGTGCGAGTGCCTCAGTGACCAGGCTGGCT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAAGCCAGCCTGGTCACTaGGGCACTCGCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQSQPGH*GTRTSR
Trigger: CCTGGAGGTGCGAGTGCCTCAGTGACCAGGCTGGCT...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACGAACACGGCAGGGCTaGCTGCGGCCACTTCCACTG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPRTRQG*LRPLPL
Trigger: CAGTGGAAGTGGCCGCAGGCAGCCCTGCCGTGTTCG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAGGGCTCTGCCTTCTCTaGCTCTATGACCTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPGLCLL*LYDLEV
Trigger: GACCTCAAGGTCATAGAGGCAGAGAAGGCAGAGCCC...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACTTCAGCCATTTGACTTaGGCCCCCTCCTCCGATACT +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHFSHLT*APSSDT
Trigger: AGTATCGGAGGAGGGGGCGCAAGTCAAATGGCTGAA...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCATCAGGTCTGCGATaGTCTGGTACACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIPSGLR*SGTPPA
Trigger: AGCTGGAGGTGTACCAGAGCATCGCAGACCTGATGG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TACAGGCGTAAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTATGCGTGATAGCCTTCTaGCAGATCACAGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: YRRKPSRLAALWAVLHAVCVIAF*QITVGA
Trigger: TGCTCCCACTGTGATCTGGCAGAAGGCTATCACGCA...TACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTTACGCCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp CCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGGGTGGGCTCATCTTCCTTCTCTaGCCCCTCGACCGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: PLEGDRGVRDVLYCQVGGLIFLL*PLDRED
Trigger: ATCTTCACGGTCGAGGGGGCAGAGAAGGAAGATGAG...CCCACCCACCTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAAGCTCTTCTTCTTCTTaGGCTCCAGGATGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVSSSSS*APGCSP
Trigger: TGGGCTACATCCTGGAGCGCAAGAAGAAGAAGAGCT...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCTGCCATATTGTGTaGCCGCACTCGGAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIPCHIV*PHSEKQ
Trigger: CTGCTTTTCCGAGTGCGGGCACACAATATGGCAGGG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCTCGCCTGCCAGGGGCTaGCCCTCTTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPSPARG*PSLVQV
Trigger: GACCTGGACCAAAGAGGGGCAGCCCCTGGCAGGCGA...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACCCTCCATGTTCTCAATaGGCACCGTCACCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHPPCSQ*APSPGK
Trigger: CTTACCAGGTGACGGTGCGCATTGAGAACATGGAGG...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCCCCTGCAGACATAGATaGCCCCGTCAAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSPCRHR*PRQRGR
Trigger: CCTGCCCCTTTGACGGGGGCATCTATGTCTGCAGGG...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATCTGAGCTTGACCCTTTaGGACTTGGGGCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: HADGVDRVDAHLVHHALDLSLTL*DLGHFL
Trigger: GAGAAAGTGCCCCAAGTCCCAAAGGGTCAAGCTCAG...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp CGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTCAAATTTGTCCTTGGTaGACACCTCACAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: RSGGRHLRETVVSETSSTQICPW*TPHSGS
Trigger: GCTACCGCTGTGAGGTGTCCACCAAGGACAAATTTG...AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATTGACCTCAGCGTCATaGTCAGCCAGTTCCACGGTC +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPLTSAS*SASSTV
Trigger: GACCGTGGAACTGGCTGACCATGACGCTGAGGTCAA...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGGGTGGGTGGTCAGGGTACGCTTaGCACCGATGGACTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PLEGDRGVRDVLYCQVGGWSGYA*HRWTQR
Trigger: TCTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCA...CCCACCCACCTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCCCACCATCACCAGCTaGTCCTCCAAGGGGCGCGTG +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRPTITS*SSKGRV
Trigger: CACGCGCCCCTTGGAGGACCAGCTGGTGATGGTGGG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACCCACCATCACCAGCTaGTCCTCCAAGGGGCGCGTG +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQPTITS*SSKGRV
Trigger: CACGCGCCCCTTGGAGGACCAGCTGGTGATGGTGGG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATTCGTTGATGATCAGGTaGTGTCTCTGCCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: HADGVDRVDAHLVHHALDSLMIR*CLCPSF
Trigger: GAAGGACGGGCAGAGACACCACCTGATCATCAACGA...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAAGCTCAGCCAGCGCCTaGCCCCCGCTAGTGCACAGT +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPSSASA*PPLVHS
Trigger: ACTGTGCACTAGCGGGGGCCAGGCGCTGGCTGAGCT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACATTTGAACACCGCCTaGTCCTTTGCGCCCACCATC +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPHLNTA*SFAPTI
Trigger: GATGGTGGGCGCAAAGGACCAGGCGGTGTTCAAATG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCATTTGAACACCGCCTaGTCCTTTGCGCCCACCATC +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIHLNTA*SFAPTI
Trigger: GATGGTGGGCGCAAAGGACCAGGCGGTGTTCAAATG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATGGGGCTGGCCTGGCTaGGGCCTTATTCCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPWGWPG*GLIPLR
Trigger: ACGCAGGGGAATAAGGCCCCAGCCAGGCCAGCCCCA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCGGGGCTGCCCCTCTTTaGTCCAGGTCACCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPGAAPL*SRSPEA
Trigger: GGCCTCAGGTGACCTGGACCAAAGAGGGGCAGCCCC...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAACAGGATGGTGTCTGTaGGGCTGTTGCGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPTGWCL*GCCGCS
Trigger: TGAGCATCCGCAACAGCCCCACAGACACCATCCTGT...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGCCAATGATGAGCTCTaGCACCACGCAGTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSANDEL*HHAVGA
Trigger: CGCACCCACTGCGTGGTGCCAGAGCTCATCATTGGC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACGGCCTTATAGTTGGGTaGCTCATAGGTGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHGLIVG*LIGDAW
Trigger: CCAGGCATCACCTATGAGCCACCCAACTATAAGGCC...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACGGTTCACCAGGGGCTaGGTGAAGCTTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQRFTRG*VKLGAS
Trigger: CGAGGCCCCAAGCTTCACCCAGCCCCTGGTGAACCG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACGGTTCACCAGGGGCTaGGTGAAGCTTGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPRFTRG*VKLGAS
Trigger: CGAGGCCCCAAGCTTCACCCAGCCCCTGGTGAACCG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGCGCCCTGTAAGTTGGTaGCCCTGCAGACATAGATGC +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLRPVSW*PCRHRC
Trigger: GCATCTATGTCTGCAGGGCCACCAACTTACAGGGCG...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACGCCCTGTAAGTTGGTaGCCCTGCAGACATAGATGC +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPRPVSW*PCRHRC
Trigger: GCATCTATGTCTGCAGGGCCACCAACTTACAGGGCG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCCAGGAGCCAGCCTaGTCACTGAGGCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPPQEPA*SLRHSH
Trigger: GTGCGAGTGCCTCAGTGACCAGGCTGGCTCCTGGGG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGCTTCTTGCTAAAAGCTaGGACTGGCTTCTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLLLAKS*DWLLPR
Trigger: CCGGGGAAGAAGCCAGTCTCAGCTTTTAGCAAGAAG...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGTTTTCAGCAGTGAGCTaGAGTCCAGAATCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQFSAVS*SPESQC
Trigger: ACACTGGGATTCTGGACTTCAGCTCACTGCTGAAAA...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCGCGCCTCATGCCCTTaGGCCTCTTTAGCATGCCGC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRRASCP*ASLACR
Trigger: GCGGCATGCTAAAGAGGCTCAAGGGCATGAGGCGCG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCGCGCCTCATGCCCTTaGGCCTCTTTAGCATGCCGC +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPRASCP*ASLACR
Trigger: GCGGCATGCTAAAGAGGCTCAAGGGCATGAGGCGCG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCGTCCTTCAGCCATTTaGCTTGCGCCCCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPRPSAI*LAPPPP
Trigger: CGGAGGAGGGGGCGCAAGTCAAATGGCTGAAGGACG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCTCTTTTCCTGCACAATaGGCTCAGCCAGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSSFPAQ*AQPAPG
Trigger: GCCAGGCGCTGGCTGAGCTCATTGTGCAGGAAAAGA...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGCTGAGACCTCACATTTaGACACCGCCTGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLLRPHI*TPPGPL
Trigger: CAAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAG...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTGGCAGCCACCCACTCTaGGCAGCCCTCTGGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSGSHPL*AALWAV
Trigger: TACTGCCCAGAGGGCTGCTCAGAGTGGGTGGCTGCC...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACCAACCATATTCTGGCTaGAGACGCGGAAGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHQPYSG*RRGSSS
Trigger: GCTACTACTTCCGCGTCTTCAGCCAGAATATGGTTG...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCAGTGTAGCCCGCGATaGCCGAGCGGTTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSQCSPR*PSGSPG
Trigger: CCCTGGTGAACCGCTCGGTCATCGCGGGCTACACTG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGGGTCCAGGCCATTCTTaGACCAGGAAATCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLGPGHS*TRKSWA
Trigger: AGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGACC...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCGGTCCAGGCCATTCTTaGACCAGGAAATCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIGPGHS*TRKSWA
Trigger: AGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGACC...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGTCTCTTTTTCAGCAGTaGGCTGAAGTCCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQSLFQQ*AEVQNP
Trigger: GGGATTCTGGACTTCAGCTCACTGCTGAAAAAGAGA...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCTCACTGCCTCCGCGCTaGCAGCGCACCTTCACTCCT +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPSLPPR*QRTFTP
Trigger: AGGAGTGAAGGTGCGCTGGCAGCGCGGAGGCAGTGA...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCTCAGCGTATGCCGTGTaGCCTCTGTGGCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPSAYAV*PLWPGR
Trigger: ACGGCCTGGCCACAGAGGGCACACGGCATACGCTGA...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAATCAGCGTATGCCGTGTaGCCTCTGTGGCCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQSAYAV*PLWPGR
Trigger: ACGGCCTGGCCACAGAGGGCACACGGCATACGCTGA...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCGCACTGTCAGCGTATaGCGTGTGCCCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRRTVSV*RVPSVA
Trigger: GGCCACAGAGGGCACACGGCATACGCTGACAGTGCG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGGAGCCAGCAATGACTaGGTAAGATCCCTGGTCGGC +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSGASND*VRSLVG
Trigger: GCCGACCAGGGATCTTACGCAGTCATTGCTGGCTCC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGTCGTGCAGCTGCAGGTaGTGGCCCACCTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRSCSCR*WPTLLL
Trigger: GAGCAGCAAGGTGGGCCAGCACCTGCAGCTGCACGA...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACTCCAGCCAGGCTCGTaGGGCGGAAGGCTGATAGGA +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQLQPGS*GGRLIG
Trigger: TCCTATCAGCCTTCCGCCGCACGAGCCTGGCTGGAG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCTCCAGCCAGGCTCGTaGGGCGGAAGGCTGATAGGA +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPLQPGS*GGRLIG
Trigger: TCCTATCAGCCTTCCGCCGCACGAGCCTGGCTGGAG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCCGTACTGGAAGGCGATaGGCTCGTACTCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSRTGRR*ARTQMG
Trigger: CCCCATCTGAGTACGAGCGCATCGCCTTCCAGTACG...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACTCTTCTGAAAGGCTGTaGTCTTCTTCTCATCGCGCC +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHSSERL*SSSHRA
Trigger: GGCGCGATGAGAAGAAGAGCACAGCCTTTCAGAAGA...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TACAGGCGTAAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTATCTTCTGAAAGGCTGTaGTCTTCTTCTCATCGCGCC +
Preference number: 4 (lower is better)
Translates to: YRRKPSRLAALWAVLHAVSSERL*SSSHRA
Trigger: GGCGCGATGAGAAGAAGAGCACAGCCTTTCAGAAGA...TACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTTACGCCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR GCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGTTCAGCCATTTGACTTaGGCCCCCTCCTCCGATACT +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLFSHLT*APSSDT
Trigger: AGTATCGGAGGAGGGGGCGCAAGTCAAATGGCTGAA...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCCCGCTAGTGCACAGTaGATAGTGCCCCGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRPASAQ*IVPRVL
Trigger: GAGGACGCGGGGCACTATGCACTGTGCACTAGCGGG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCTGTGGGACACCTTTATaGGGCTGTCGGGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSCGTPL*GCRAPA
Trigger: AGCTGGTGCCCGACAGCCGCATAAAGGTGTCCCACA...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCTCCATGTTCTCAATaGGCACCGTCACCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIPPCSQ*APSPGK
Trigger: CTTACCAGGTGACGGTGCGCATTGAGAACATGGAGG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCAGAGCTCCGTGTTaGCGACATCCTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPPRAPC*RHPGVA
Trigger: AGCCACCCCAGGATGTCGGCAACACGGAGCTCTGGG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCCCAGAGCTCCGTGTTaGCGACATCCTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPPRAPC*RHPGVA
Trigger: AGCCACCCCAGGATGTCGGCAACACGGAGCTCTGGG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGGGACTGCCCGACAACTaGCCTGCTGATCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQGLPDN*PADPPS
Trigger: CGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCC...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGGCCGTGTGCCCTCTGTaGCCAGGCCGTACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQAVCPL*PGRTCC
Trigger: GCAACAAGTACGGCCTGGCCACAGAGGGCACACGGC...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGCTGAGCTTGACCCTTTaGGACTTGGGGCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLLSLTL*DLGHFL
Trigger: GAGAAAGTGCCCCAAGTCCCAAAGGGTCAAGCTCAG...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCACCTCGCCATCCTGTaGCCGCATCACGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRHLAIL*PHHEEA
Trigger: GGCCTCTTCGTGATGCGGCCACAGGATGGCGAGGTG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGCACCTCGCCATCCTGTaGCCGCATCACGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQHLAIL*PHHEEA
Trigger: GGCCTCTTCGTGATGCGGCCACAGGATGGCGAGGTG...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCTGCAGCTGCAGGTGCTaGCCCACCTTGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPCSCRC*PTLLLR
Trigger: CCTGAGCAGCAAGGTGGGCCAGCACCTGCAGCTGCA...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACTCATCTGGATCTCCTaGCCATTCTTGAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVLIWIS*PFLSHL
Trigger: CAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAG...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGTCGTTGATGATCAGGTaGTGTCTCTGCCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLSLMIR*CLCPSF
Trigger: GAAGGACGGGCAGAGACACCACCTGATCATCAACGA...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCTCGTTGATGATCAGGTaGTGTCTCTGCCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLISLMIR*CLCPSF
Trigger: GAAGGACGGGCAGAGACACCACCTGATCATCAACGA...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCAGATGCTGCGGTCCTTaGTGGTCTCCACGCGGACCC +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPRCCGP*WSPRGP
Trigger: GGGTCCGCGTGGAGACCACCAAGGACCGCAGCATCT...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGCCGCAGGTGCGTCTaGCACGTCGATGACCTTGAC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRGRRCV*HVDDLD
Trigger: GTCAAGGTCATCGACGTGCCAGACGCACCTGCGGCC...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGGGATGTAGCCCAGGATaGGCTGCCCGCCATCGTAGG +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQGCSPG*AARHRR
Trigger: CCTACGATGGCGGGCAGCCCATCCTGGGCTACATCC...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCATCCTGGGGAGGACTTaGCTTGTCAACAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIILGRT*LVNNLQ
Trigger: CTGCAGGTTGTTGACAAGCCAAGTCCTCCCCAGGAT...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCGGGCTGGGTGAAGCTTaGGGCCTCGGAGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPGLGEA*GLGEVQ
Trigger: CTGGACTTCTCCGAGGCCCCAAGCTTCACCCAGCCC...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAGGGCTGGGTGAAGCTTaGGGCCTCGGAGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQGLGEA*GLGEVQ
Trigger: CTGGACTTCTCCGAGGCCCCAAGCTTCACCCAGCCC...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGCATCCGGTTGTACCTaGCCATCCCCAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRASGCT*PSPGAS
Trigger: GCTGGCTCCTGGGGATGGCCAGGTACAACCGGATGC...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCGCATCCGGTTGTACCTaGCCATCCCCAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPASGCT*PSPGAS
Trigger: GCTGGCTCCTGGGGATGGCCAGGTACAACCGGATGC...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAGCATCCGGTTGTACCTaGCCATCCCCAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPASGCT*PSPGAS
Trigger: GCTGGCTCCTGGGGATGGCCAGGTACAACCGGATGC...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCCGGCTCAGGCATCCTaGGAGACGTCACACCAGGCA +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSPAQAS*ETSHQA
Trigger: TGCCTGGTGTGACGTCTCTCAGGATGCCTGAGCCGG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACTTTTCAGCAGTGAGCTaGAGTCCAGAATCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHFSAVS*SPESQC
Trigger: ACACTGGGATTCTGGACTTCAGCTCACTGCTGAAAA...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGGCTCTTTTTCAGCAGTaGGCTGAAGTCCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLALFQQ*AEVQNP
Trigger: GGGATTCTGGACTTCAGCTCACTGCTGAAAAAGAGC...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256993.8
ENST00000399249.6
CDS-3UTR TCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCTGCGTCGTCCGCCAATaGGCACTGGCTGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPCVVRQ*ALADGQ
Trigger: CTGACCATCAGCCAGTGCTCATTGGCGGACGACGCA...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATGCGTCGTCCGCCAATaGGCACTGGCTGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPCVVRQ*ALADGQ
Trigger: CTGACCATCAGCCAGTGCTCATTGGCGGACGACGCA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGTGCGTCGTCCGCCAATaGGCACTGGCTGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRCVVRQ*ALADGQ
Trigger: CTGACCATCAGCCAGTGCTCATTGGCGGACGACGCA...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCGTCCTTCAGCCATTTaGCTTGCGCCCCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSRPSAI*LAPPPP
Trigger: CGGAGGAGGGGGCGCAAGTCAAATGGCTGAAGGACG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGCCGAACATTCTCATCTaGGACCTCACATTTGAACAC +
Preference number: 4 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQPNILI*DLTFEH
Trigger: GTGTTCAAATGTGAGGTCTCAGATGAGAATGTTCGG...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR TCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCGAACATTCTCATCTaGGACCTCACATTTGAACAC +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVPNILI*DLTFEH
Trigger: GTGTTCAAATGTGAGGTCTCAGATGAGAATGTTCGG...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAACATGCCGATGGCGTTaGCCGCGTAGACGCGCATCT +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPTCRWR*PRRRAS
Trigger: AGATGCGCGTCTACGCGGTCAACGCCATCGGCATGT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCCCCGACCTTCTTCTaGATGGTCTGGCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQSPTFF*MVWRRC
Trigger: GCACCTGCGCCAGACCATTCAGAAGAAGGTCGGGGA...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGACACTCCCTGCTTGCTaGACATGCGGAAGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRTLPAC*TCGSGR
Trigger: ACGCCCGCTTCCGCATGTTCAGCAAGCAGGGAGTGT...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGGTCCTCCTCTGCTGGTaGCTCCAGCTTCGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQVLLCW*LQLRVP
Trigger: AGGGACTCGAAGCTGGAGGCACCAGCAGAGGAGGAC...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATCAGATGGGGGTGCCTaGCGTAGGATCTCCCACACG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPSDGGA*RRISHT
Trigger: CGTGTGGGAGATCCTACGGCAGGCACCCCCATCTGA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCATCAGGTGGTGTCTCTaGCCGTCCTTCTTGAACCGG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSIRWCL*PSFLNR
Trigger: CCGGTTCAAGAAGGACGGGCAGAGACACCACCTGAT...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCTCCAGCTTCTTTTCCTaGACAATGAGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLISSFFS*TMSSAS
Trigger: GCTGGCTGAGCTCATTGTGCAGGAAAAGAAGCTGGA...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCATCTTGGGAGGTTCCTaGCTGGGTACGAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIILGGS*LGTKSI
Trigger: GATTGACTTCGTACCCAGGCAGGAACCTCCCAAGAT...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGCCACGCCCTCGATCATaGGCCGCGCTTCATGACTCA +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQPRPRS*AALHDS
Trigger: TGAGTCATGAAGCGCGGCGCATGATCGAGGGCGTGG...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCACGCCCTCGATCATaGGCCGCGCTTCATGACTCA +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPPRPRS*AALHDS
Trigger: TGAGTCATGAAGCGCGGCGCATGATCGAGGGCGTGG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCCACGCCCTCGATCATaGGCCGCGCTTCATGACTCA +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPPRPRS*AALHDS
Trigger: TGAGTCATGAAGCGCGGCGCATGATCGAGGGCGTGG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTTGCTCTGTCAGCCCCTaGAGGGCAGCCACCCACTCT +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSCSVSP*RAATHS
Trigger: AGAGTGGGTGGCTGCCCTGCAGGGGCTGACAGAGCA...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCGTTGCAGGATCTCCTaGACTGTCACCGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPRCRIS*TVTGSV
Trigger: CACGGAGCCGGTGACAGTGCAGGAGATCCTGCAACG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGAGAGTCAACACTCCCTaGTTGCTGAACATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLRVNTP*LLNMRK
Trigger: CTTCCGCATGTTCAGCAAGCAGGGAGTGTTGACTCT...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGTAAGTTGGTGGCCCTaGAGACATAGATGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSVSWWP*RHRCPR
Trigger: ACGGGGGCATCTATGTCTGCAGGGCCACCAACTTAC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAACACCCACTCAGGACTaGCCGACAACTGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQTPTQD*PTTALL
Trigger: CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGT...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCCTGTGGACCAGTCTGTaGAACACCCACTCAGGACTG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSLWTSL*NTHSGL
Trigger: CAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACAG...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGTCACGAAGAGGCCAATaGGGTCATCGGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRSRRGQ*GHRGLQ
Trigger: CTGGAGCCCCCGATGACCCCATTGGCCTCTTCGTGA...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCACCTCGCCATCCTGTaGCCGCATCACGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSHLAIL*PHHEEA
Trigger: GGCCTCTTCGTGATGCGGCCACAGGATGGCGAGGTG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCCAGTGAAGGCAGGCTaGGCATCGGTGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPPVKAG*ASVMCS
Trigger: GCTGCACATCACCGATGCCCAGCCTGCCTTCACTGG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACAAATTTGTCCTTGGTaGACACCTCACAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPQICPW*TPHSGS
Trigger: GCTACCGCTGTGAGGTGTCCACCAAGGACAAATTTG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp TACAGGCGTAAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTACTCATCTGGATCTCCTaGCCATTCTTGAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: YRRKPSRLAALWAVLHAVLIWIS*PFLSHL
Trigger: CAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAG...TACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTTACGCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CCA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATTGACCTCCATGAAGTaGAGCTTGGCTGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPLTSMK*SLADRL
Trigger: CAACCTGTCAGCCAAGCTCCACTTCATGGAGGTCAA...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACCTGGGCAGTCCAGGTaGATCTTGGGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQPGQSR*ILGGSC
Trigger: GCAGGAACCTCCCAAGATCCACCTGGACTGCCCAGG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCAACCACAATGGTGTCTaGTATGCGGCCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSNHNGV*YAAWAV
Trigger: GACTGCCCAGGCCGCATACCAGACACCATTGTGGTT...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTGTCACCTGTGTCCTCTaGGGCATCTGGGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSVTCVL*GIWGWP
Trigger: AGGCCAGCCCCAGATGCCCCAGAGGACACAGGTGAC...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTGGATGTAGCCCAGGATaGGCTGCCCGCCATCGTAGG +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSGCSPG*AARHRR
Trigger: CCTACGATGGCGGGCAGCCCATCCTGGGCTACATCC...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTGCCGACATCCTGGGGTaGCTTCCACTCCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSADILG*LPLQSH
Trigger: GTGGCTCTGGAGTGGAAGCCACCCCAGGATGTCGGC...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTATTGCCCAATAAACATTaGGAAGACATAGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVLPNKH*EDIAGQ
Trigger: CTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAA...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGTTTTCAGCAGTGAGCTaGAGTCCAGAATCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: CGPVCATPTQDCPTTALLFSAVS*SPESQC
Trigger: ACACTGGGATTCTGGACTTCAGCTCACTGCTGAAAA...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGCCAATGAGCACTGGCTaGTGGTCAGGGTACGCTTGG +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQPMSTG*WSGYAW
Trigger: CCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGG...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCAATGAGCACTGGCTaGTGGTCAGGGTACGCTTGG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPPMSTG*WSGYAW
Trigger: CCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATCTTTTCCTGCACAATaGGCTCAGCCAGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPSFPAQ*AQPAPG
Trigger: GCCAGGCGCTGGCTGAGCTCATTGTGCAGGAAAAGA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAGGAGCCAGCAATGACTaGGTAAGATCCCTGGTCGGC +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPGASND*VRSLVG
Trigger: GCCGACCAGGGATCTTACGCAGTCATTGCTGGCTCC...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGGGCCAGCATGGGCTCTaGCTTCTCTGCCTCTATGAC +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQGQHGL*LLCLYD
Trigger: GTCATAGAGGCAGAGAAGGCAGAGCCCATGCTGGCC...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGCCAGCATGGGCTCTaGCTTCTCTGCCTCTATGAC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRGQHGL*LLCLYD
Trigger: GTCATAGAGGCAGAGAAGGCAGAGCCCATGCTGGCC...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTGGTGCTGGCCCACCTTaGTGCTCAGGTCCACCCATT +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSGAGPP*CSGPPI
Trigger: AATGGGTGGACCTGAGCAGCAAGGTGGGCCAGCACC...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGGGTCCGGAAACTGCTaGTCTTTTTCAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSGSGNC*SFSAVS
Trigger: GCTCACTGCTGAAAAAGAGCAGCAGTTTCCGGACCC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256993.8
ENST00000399249.6
CDS-3UTR GCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCCACACGTCCTCCTCTaGTGGTGCCTCCAGCTTCGA +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSPHVLL*WCLQLR
Trigger: TCGAAGCTGGAGGCACCAGCAGAGGAGGACGTGTGG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCGGATCTTGTGGCCTTTaGTCACCTGGTAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPGSCGL*SPGRPA
Trigger: AGCCGGCCTACCAGGTGAGCAAAGGCCACAAGATCC...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCTTCAGCCATTTGACTTaGGCCCCCTCCTCCGATACT +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSFSHLT*APSSDT
Trigger: AGTATCGGAGGAGGGGGCGCAAGTCAAATGGCTGAA...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCAATGGTGTCTGGTATaGGGCCTGGGCAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRQWCLV*GLGSPG
Trigger: ACCTGGACTGCCCAGGCCGCATACCAGACACCATTG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGCAATGGTGTCTGGTATaGGGCCTGGGCAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQQWCLV*GLGSPG
Trigger: ACCTGGACTGCCCAGGCCGCATACCAGACACCATTG...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGGGCCTTATTCCCCTaGGTGATAGCCTTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRGALFP*VIAFCQ
Trigger: CTGGCAGAAGGCTATCACGCAGGGGAATAAGGCCCC...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCCTCATCTTCCTTCTCTaGCCCCTCGACCGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSLIFLL*PLDRED
Trigger: ATCTTCACGGTCGAGGGGGCAGAGAAGGAAGATGAG...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAGCTCCCACTGTACTGTaGAGGAGTCCTCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQAPTVL*RSPLPR
Trigger: ACGTGGGAGAGGACTCCTGCACAGTACAGTGGGAGC...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAGCTCCCACTGTACTGTaGAGGAGTCCTCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPAPTVL*RSPLPR
Trigger: ACGTGGGAGAGGACTCCTGCACAGTACAGTGGGAGC...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAAGAGACGTCCTCTACTaGCAGGTGGGTGGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPRDVLY*QVGGFA
Trigger: AGCGAACCCACCCACCTGGCAGTAGAGGACGTCTCT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCGGCTTGTCAACAACCTaGAGCACCAGCGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPGLSTT*STSVAL
Trigger: CAAGGCCACGCTGGTGCTGCAGGTTGTTGACAAGCC...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGGGCTTGTCAACAACCTaGAGCACCAGCGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQGLSTT*STSVAL
Trigger: CAAGGCCACGCTGGTGCTGCAGGTTGTTGACAAGCC...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCCCTGCAGACATAGATaGCCCCGTCAAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSPCRHR*PRQRGR
Trigger: CCTGCCCCTTTGACGGGGGCATCTATGTCTGCAGGG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTACACCCACTCAGGACTaGCCGACAACTGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSTPTQD*PTTALL
Trigger: CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGT...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCCTGAGCTTGACCCTTTaGGACTTGGGGCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSLSLTL*DLGHFL
Trigger: GAGAAAGTGCCCCAAGTCCCAAAGGGTCAAGCTCAG...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGTGCCCATGGCCTCGTaGACAGTGAGATTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSVPMAS*TVRLKL
Trigger: CAACTTCAATCTCACTGTCCACGAGGCCATGGGCAC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATCAGTGACGCCGTACTaGAAGGCGATGCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPSVTPY*KAMRSY
Trigger: GTACGAGCGCATCGCCTTCCAGTACGGCGTCACTGA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAGTCTGGTATGCGGCCTaGGCAGTCCAGGTGGATCTT +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQVWYAA*AVQVDL
Trigger: AAGATCCACCTGGACTGCCCAGGCCGCATACCAGAC...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAACTGTGAGGTTGACCTaGTCCTCGCCCACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQTVRLT*SSPTGF
Trigger: GAACCCTGTGGGCGAGGACCAGGTCAACCTCACAGT...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCGCAGCCGGGCCCCCGTaGGCAGGTCCTTCACCAGTA +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSAAGPP*AGPSPV
Trigger: TACTGGTGAAGGACCTGCCCACGGGGGCCCGGCTGC...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCGACCTTCTTCTGAATaGTCTGGCGCAGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRRPSSE*SGAGAW
Trigger: CCAGGCACCTGCGCCAGACCATTCAGAAGAAGGTCG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGTGTTGCCGACATCCTaGGGTGGCTTCCACTCCAGA +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRVLPTS*GGFHSR
Trigger: TCTGGAGTGGAAGCCACCCCAGGATGTCGGCAACAC...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGGCCTTATAGTTGGGTaGCTCATAGGTGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSGLIVG*LIGDAW
Trigger: CCAGGCATCACCTATGAGCCACCCAACTATAAGGCC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAAGGAAATCTTGGGCTTaGGGCTACCCCGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPRKSWA*GYPGQH
Trigger: GTGCTGTCCGGGGTAGCCCCAAGCCCAAGATTTCCT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACCTTCAGGAGCCCTGTaGACCAGTCTGTGCAACACC +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQPSGAL*TSLCNT
Trigger: GGTGTTGCACAGACTGGTCCACAGGGCTCCTGAAGG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATGCGGCCACTTCCACTaGCCGTGGCTTCTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPCGHFH*PWLLAK
Trigger: TTTAGCAAGAAGCCACGGTCAGTGGAAGTGGCCGCA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCTGGAGGAGCCAGCAATaGCTGCGTAAGATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPWRSQQ*LRKIPG
Trigger: ACCAGGGATCTTACGCAGTCATTGCTGGCTCCTCCA...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCAGGCTGGGCATCGGTaGTGTGCAGCTCGAACAGAT +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSQAGHR*CAARTD
Trigger: ATCTGTTCGAGCTGCACATCACCGATGCCCAGCCTG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCCTCGTCGGCAGGTGTaGCGTCGTCAATGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSPRRQV*RRQWSV
Trigger: AACTGACCATTGACGACGTCACACCTGCCGACGAGG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGGGTTCTTCACTGTaGCCGTGTAGACGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQQGSSL*PCRRPH
Trigger: ATGAGGGCGTCTACACGGTCACAGTGAAGAACCCTG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCCCAGACATTGTTTCTTaGGGCCACCCTCCTTTTACC +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSPDIVS*GHPPFT
Trigger: GGTAAAAGGAGGGTGGCCTCAAGAAACAATGTCTGG...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCGCGCACCTTCACTCCTaGCCGCTCTGTCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSAHLHS*PLCLGL
Trigger: GAGGCCGAGACAGAGCGGGCAGGAGTGAAGGTGCGC...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCGAACAGATAGACCTTaGTGGCGCGGTCGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPRTDRP*WRGRSC
Trigger: ACAGCTACGACCGCGCCAGCAAGGTCTATCTGTTCG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCTCTTCTGAAAGGCTGTaGTCTTCTTCTCATCGCGCC +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSSSERL*SSSHRA
Trigger: GGCGCGATGAGAAGAAGAGCACAGCCTTTCAGAAGA...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGATCAGGTGGTGTCTCTaGCCGTCCTTCTTGAACCGG +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQIRWCL*PSFLNR
Trigger: CCGGTTCAAGAAGGACGGGCAGAGACACCACCTGAT...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCATCTTGGGAGGTTCCTaGCTGGGTACGAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSILGGS*LGTKSI
Trigger: GATTGACTTCGTACCCAGGCAGGAACCTCCCAAGAT...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGAGACGTCCTCTACTaGCAGGTGGGTGGGTTCGCT +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSRDVLY*QVGGFA
Trigger: AGCGAACCCACCCACCTGGCAGTAGAGGACGTCTCT...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCACCAGTATCGATGTGTaGTCTGTCAGCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPTSIDV*SVSPCR
Trigger: CCTGCAGGGGCTGACAGAGCACACATCGATACTGGT...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCTCGCCTGCCAGGGGCTaGCCCTCTTTGGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSSPARG*PSLVQV
Trigger: GACCTGGACCAAAGAGGGGCAGCCCCTGGCAGGCGA...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAGTAAGTTGGTGGCCCTaGAGACATAGATGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPVSWWP*RHRCPR
Trigger: ACGGGGGCATCTATGTCTGCAGGGCCACCAACTTAC...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAACAGATAGACCTTGCTaGCGCGGTCGTAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPTDRPC*RGRSCR
Trigger: ACGACAGCTACGACCGCGCCAGCAAGGTCTATCTGT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGACAGATAGACCTTGCTaGCGCGGTCGTAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQTDRPC*RGRSCR
Trigger: ACGACAGCTACGACCGCGCCAGCAAGGTCTATCTGT...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCAGCTCAGCCAGCGCCTaGCCCCCGCTAGTGCACAGT +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSSSASA*PPLVHS
Trigger: ACTGTGCACTAGCGGGGGCCAGGCGCTGGCTGAGCT...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGAGTCCAGGTGGATCTTaGGAGGTTCCTGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQSPGGS*EVPAWV
Trigger: TACCCAGGCAGGAACCTCCCAAGATCCACCTGGACT...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGAGTCCAGGTGGATCTTaGGAGGTTCCTGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRSPGGS*EVPAWV
Trigger: TACCCAGGCAGGAACCTCCCAAGATCCACCTGGACT...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAAACCACAATGGTGTCTaGTATGCGGCCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQNHNGV*YAAWAV
Trigger: GACTGCCCAGGCCGCATACCAGACACCATTGTGGTT...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAAACCACAATGGTGTCTaGTATGCGGCCTGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPNHNGV*YAAWAV
Trigger: GACTGCCCAGGCCGCATACCAGACACCATTGTGGTT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCTGGGGCTGGCCTGGCTaGGGCCTTATTCCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSWGWPG*GLIPLR
Trigger: ACGCAGGGGAATAAGGCCCCAGCCAGGCCAGCCCCA...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCGACCTTCTTCTGAATaGTCTGGCGCAGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSRPSSE*SGAGAW
Trigger: CCAGGCACCTGCGCCAGACCATTCAGAAGAAGGTCG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGACAGGATGGTGTCTGTaGGGCTGTTGCGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQTGWCL*GCCGCS
Trigger: TGAGCATCCGCAACAGCCCCACAGACACCATCCTGT...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGAAATCTTGGGCTTaGGGCTACCCCGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSRKSWA*GYPGQH
Trigger: GTGCTGTCCGGGGTAGCCCCAAGCCCAAGATTTCCT...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGCCTCGCCCTGTAAGTTaGTGGCCCTGCAGACATAGA +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQPRPVS*WPCRHR
Trigger: TCTATGTCTGCAGGGCCACCAACTTACAGGGCGAGG...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCCTCGCCCTGTAAGTTaGTGGCCCTGCAGACATAGA +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRPRPVS*WPCRHR
Trigger: TCTATGTCTGCAGGGCCACCAACTTACAGGGCGAGG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCCCAGGAGCCAGCCTaGTCACTGAGGCACTCGCAC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSPQEPA*SLRHSH
Trigger: GTGCGAGTGCCTCAGTGACCAGGCTGGCTCCTGGGG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCGCACTGTCAGCGTATaGCGTGTGCCCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSRTVSV*RVPSVA
Trigger: GGCCACAGAGGGCACACGGCATACGCTGACAGTGCG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATCACAAAGAGCTCCGTaGTACACTTCTCGCCACCCA +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPSQRAP*YTSRHP
Trigger: TGGGTGGCGAGAAGTGTAGCACGGAGCTCTTTGTGA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGTGCGTGATAGCCTTCTaGCAGATCACAGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRCVIAF*QITVGA
Trigger: TGCTCCCACTGTGATCTGGCAGAAGGCTATCACGCA...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAATGCGTGATAGCCTTCTaGCAGATCACAGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQCVIAF*QITVGA
Trigger: TGCTCCCACTGTGATCTGGCAGAAGGCTATCACGCA...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACTCATCTTCCTTCTCTaGCCCCTCGACCGTGAAGAT +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQLIFLL*PLDRED
Trigger: ATCTTCACGGTCGAGGGGGCAGAGAAGGAAGATGAG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAATTCTTGTCGGCTTTCTaGACTGTGTACCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQFLSAF*TVYPQS
Trigger: GCTCTGGGGGTACACAGTGCAGAAAGCCGACAAGAA...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTGTAAGTTGGTGGCCCTaGAGACATAGATGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSVSWWP*RHRCPR
Trigger: ACGGGGGCATCTATGTCTGCAGGGCCACCAACTTAC...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCGGACTGCCCGACAACTaGCCTGCTGATCCCCCATCG +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSGLPDN*PADPPS
Trigger: CGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCC...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCTGAGCTTGACCCTTTaGGACTTGGGGCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRLSLTL*DLGHFL
Trigger: GAGAAAGTGCCCCAAGTCCCAAAGGGTCAAGCTCAG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGGTGCCCATGGCCTCGTaGACAGTGAGATTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQVPMAS*TVRLKL
Trigger: CAACTTCAATCTCACTGTCCACGAGGCCATGGGCAC...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAATCCCAGTGTCCTCATaGCTATCACTGATCCGCCGA +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPIPVSS*LSLIRR
Trigger: TCGGCGGATCAGTGATAGCCATGAGGACACTGGGAT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTTCAATGGTCAGTTTGTaGACCCGCCCGATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSSMVSL*TRPMWD
Trigger: GTCCCACATCGGGCGGGTCCACAAACTGACCATTGA...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCAGATGCTGCGGTCCTTaGTGGTCTCCACGCGGACCC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSRCCGP*WSPRGP
Trigger: GGGTCCGCGTGGAGACCACCAAGGACCGCAGCATCT...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCGGCCGCAGGTGCGTCTaGCACGTCGATGACCTTGAC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSGRRCV*HVDDLD
Trigger: GTCAAGGTCATCGACGTGCCAGACGCACCTGCGGCC...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGATCCTGGGGAGGACTTaGCTTGTCAACAACCTGCAG +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRILGRT*LVNNLQ
Trigger: CTGCAGGTTGTTGACAAGCCAAGTCCTCCCCAGGAT...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAGGCCTTATAGTTGGGTaGCTCATAGGTGATGCCTGG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPGLIVG*LIGDAW
Trigger: CCAGGCATCACCTATGAGCCACCCAACTATAAGGCC...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCGAAGTGGAGCTTGGCTaGCAGGTTGCAGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSEVELG*QVAGEA
Trigger: GGCTTCGCCTGCAACCTGTCAGCCAAGCTCCACTTC...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAAATGCTCCAAGACGGTaGACCACTCCATGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQNAPRR*TTPWSS
Trigger: AGAAGACCATGGAGTGGTTCACCGTCTTGGAGCATT...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAAATGCTCCAAGACGGTaGACCACTCCATGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPNAPRR*TTPWSS
Trigger: AGAAGACCATGGAGTGGTTCACCGTCTTGGAGCATT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCCAGACATTGTTTCTTaGGGCCACCCTCCTTTTACC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRPDIVS*GHPPFT
Trigger: GGTAAAAGGAGGGTGGCCTCAAGAAACAATGTCTGG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCAAAGATGTACCTGCTaGCGCTCATCTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRQRCTC*RSSGSP
Trigger: AGGAGATCCAGATGAGCGGCAGCAGGTACATCTTTG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256993.8
CDS-3UTR GCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGATCTTGGGAGGTTCCTaGCTGGGTACGAAGTCAATC +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQILGGS*LGTKSI
Trigger: GATTGACTTCGTACCCAGGCAGGAACCTCCCAAGAT...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAAGCTCTTCTTCTTCTTaGGCTCCAGGATGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQSSSSS*APGCSP
Trigger: TGGGCTACATCCTGGAGCGCAAGAAGAAGAAGAGCT...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCGTCACCTGGTAAGTaGCTGAATGCACGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSPSPGK*LNARGE
Trigger: CTCGCCGCGTGCATTCAGGCACTTACCAGGTGACGG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGAGAGTCAACACTCCCTaGTTGCTGAACATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQRVNTP*LLNMRK
Trigger: CTTCCGCATGTTCAGCAAGCAGGGAGTGTTGACTCT...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAAGAGTCAACACTCCCTaGTTGCTGAACATGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPRVNTP*LLNMRK
Trigger: CTTCCGCATGTTCAGCAAGCAGGGAGTGTTGACTCT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAAATTTGTCCTTGGTaGACACCTCACAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQQICPW*TPHSGS
Trigger: GCTACCGCTGTGAGGTGTCCACCAAGGACAAATTTG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCAAATTTGTCCTTGGTaGACACCTCACAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRQICPW*TPHSGS
Trigger: GCTACCGCTGTGAGGTGTCCACCAAGGACAAATTTG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAATTGACCTCCATGAAGTaGAGCTTGGCTGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQLTSMK*SLADRL
Trigger: CAACCTGTCAGCCAAGCTCCACTTCATGGAGGTCAA...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCTGGGCAGTCCAGGTaGATCTTGGGAGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSPGQSR*ILGGSC
Trigger: GCAGGAACCTCCCAAGATCCACCTGGACTGCCCAGG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCGCCAATGATGAGCTCTaGCACCACGCAGTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSANDEL*HHAVGA
Trigger: CGCACCCACTGCGTGGTGCCAGAGCTCATCATTGGC...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCAGGCTGGGCATCGGTaGTGTGCAGCTCGAACAGAT +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSQAGHR*CAARTD
Trigger: ATCTGTTCGAGCTGCACATCACCGATGCCCAGCCTG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAATGAGCACTGGCTaGTGGTCAGGGTACGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSPMSTG*WSGYAW
Trigger: CCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCTCGTCGGCAGGTGTaGCGTCGTCAATGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSPRRQV*RRQWSV
Trigger: AACTGACCATTGACGACGTCACACCTGCCGACGAGG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAATGCTCCAAGACGGTaGACCACTCCATGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSNAPRR*TTPWSS
Trigger: AGAAGACCATGGAGTGGTTCACCGTCTTGGAGCATT...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCTCTCTTTTTCAGCAGTaGGCTGAAGTCCAGAATCCC +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPSLFQQ*AEVQNP
Trigger: GGGATTCTGGACTTCAGCTCACTGCTGAAAAAGAGA...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545968.6
CDS-3UTR GCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGCTCTTCTTCTTCTTaGGCTCCAGGATGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSSSSSS*APGCSP
Trigger: TGGGCTACATCCTGGAGCGCAAGAAGAAGAAGAGCT...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACGCACTTATCTTTTATTaGCCAATAAACATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHALIFY*PINIGK
Trigger: CTTCCCAATGTTTATTGGGCAATAAAAGATAAGTGC...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAAGTCAAATTTGTCCTTaGTGGACACCTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQSQICP*WTPHSG
Trigger: ACCGCTGTGAGGTGTCCACCAAGGACAAATTTGACT...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGAGTCAAATTTGTCCTTaGTGGACACCTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRSQICP*WTPHSG
Trigger: ACCGCTGTGAGGTGTCCACCAAGGACAAATTTGACT...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACTCATCTGGATCTCCTaGCCATTCTTGAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQLIWIS*PFLSHL
Trigger: CAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTTACGCTTGGCACCGATaGACTCAAAGATGTACCTGC +
Preference number: 4 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSYAWHR*TQRCTC
Trigger: GCAGGTACATCTTTGAGTCCATCGGTGCCAAGCGTA...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256993.8
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCTCCGCCAATGAGCACTaGCTGATGGTCAGGGTACGC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSSANEH*LMVRVR
Trigger: GCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGA...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCGTCTGGTATGCGGCCTaGGCAGTCCAGGTGGATCTT +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSVWYAA*AVQVDL
Trigger: AAGATCCACCTGGACTGCCCAGGCCGCATACCAGAC...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCACTGTGAGGTTGACCTaGTCCTCGCCCACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSTVRLT*SSPTGF
Trigger: GAACCCTGTGGGCGAGGACCAGGTCAACCTCACAGT...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCGTCACCCGGAGATCCTaGGGAGGACTTGGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSVTRRS*GGLGLS
Trigger: TGACAAGCCAAGTCCTCCCCAGGATCTCCGGGTGAC...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTACGCTTGGCACCGATaGACTCAAAGATGTACTTGC +
Preference number: 4 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQYAWHR*TQRCTC
Trigger: GCAAGTACATCTTTGAGTCCATCGGTGCCAAGCGTA...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATACGCTTGGCACCGATaGACTCAAAGATGTACTTGC +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPYAWHR*TQRCTC
Trigger: GCAAGTACATCTTTGAGTCCATCGGTGCCAAGCGTA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCTGGAGGAGCCAGCAATaGCTGCGTAAGATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSWRSQQ*LRKIPG
Trigger: ACCAGGGATCTTACGCAGTCATTGCTGGCTCCTCCA...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCCGAACATTCTCATCTaGGACCTCACATTTGAACAC +
Preference number: 4 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRPNILI*DLTFEH
Trigger: GTGTTCAAATGTGAGGTCTCAGATGAGAATGTTCGG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCGAACATTCTCATCTaGGACCTCACATTTGAACAC +
Preference number: 4 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPPNILI*DLTFEH
Trigger: GTGTTCAAATGTGAGGTCTCAGATGAGAATGTTCGG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR TCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCAGGGTTCTTCACTGTaGCCGTGTAGACGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSQGSSL*PCRRPH
Trigger: ATGAGGGCGTCTACACGGTCACAGTGAAGAACCCTG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCGGGCTCTGCCTTCTCTaGCTCTATGACCTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSGLCLL*LYDLEV
Trigger: GACCTCAAGGTCATAGAGGCAGAGAAGGCAGAGCCC...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCGAACAGATAGACCTTaGTGGCGCGGTCGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSRTDRP*WRGRSC
Trigger: ACAGCTACGACCGCGCCAGCAAGGTCTATCTGTTCG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCATCAGGTCTGCGATaGTCTGGTACACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSPSGLR*SGTPPA
Trigger: AGCTGGAGGTGTACCAGAGCATCGCAGACCTGATGG...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCGCACTTATCTTTTATTaGCCAATAAACATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GPVCATPTQDCPTTALLIALIFY*PINIGK
Trigger: CTTCCCAATGTTTATTGGGCAATAAAAGATAAGTGC...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCTTGCCCAATAAACATTaGGAAGACATAGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPLPNKH*EDIAGQ
Trigger: CTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAA...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CCA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCTCGTTGATGATCAGGTaGTGTCTCTGCCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSSLMIR*CLCPSF
Trigger: GAAGGACGGGCAGAGACACCACCTGATCATCAACGA...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR GCA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGCACTTATCTTTTATTaGCCAATAAACATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSALIFY*PINIGK
Trigger: CTTCCCAATGTTTATTGGGCAATAAAAGATAAGTGC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS GCA 90 bp GGCGCTGATGTCACTGCCTCCGCGCTGCCAGCGCACCTTCACTCCTaGCCGCTCTGTCTCGGCCTCGAACACGGCAGGGCTGCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: GADVTASALPAHLHS*PLCLGLEHGRAACG
Trigger: GCCGCAGGCAGCCCTGCCGTGTTCGAGGCCGAGACAGAGCGGGCAGGAGTGAAGGTGCGCTGGCAGCGCGGAGGCAGTGACATCAGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS-3UTR CAA 90 bp GCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACTCTGGGGGCCGCCACTaGAGGGAGACCGTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: AIQASCSHALWGPPLEGDSGGRH*RETVVS
Trigger: TGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGA...GTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp CACGCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTAGCTTGGCTGACAGGTaGCAGGCGAAGCCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: HAVAIQASCSHALWGPPLSLADR*QAKPSG
Trigger: GCCCGAGGGCTTCGCCTGCAACCTGTCAGCCAAGCT...AAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCCCCAGAGCTCCGTGTaGCCGACATCCTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAPQSSV*PTSWGG
Trigger: GCCACCCCAGGATGTCGGCAACACGGAGCTCTGGGG...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGGGCTGGCATCCGGTaGTACCTGGCCATCCCCAGG +
Preference number: 5 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPGAGIR*YLAIPR
Trigger: CCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCC...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCGGGGCTGGCATCCGGTaGTACCTGGCCATCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGGAGIR*YLAIPR
Trigger: CCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCC...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGTCGCGCCTCATGCCCTaGAGCCTCTTTAGCATGCCG +
Preference number: 5 (lower is better)
Translates to: SRPPAPTRSGGRHLRETVSRLMP*SLFSMP
Trigger: CGGCATGCTAAAGAGGCTCAAGGGCATGAGGCGCGA...CACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGCTTGGCTGACAGGTaGCAGGCGAAGCCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPSLADR*QAKPSG
Trigger: GCCCGAGGGCTTCGCCTGCAACCTGTCAGCCAAGCT...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGAAGATGCTGCGGTCCTaGGTGGTCTCCACGCGGACC +
Preference number: 5 (lower is better)
Translates to: AVAIQASCSHALWGPPLEKMLRS*VVSTRT
Trigger: GGTCCGCGTGGAGACCACCAAGGACCGCAGCATCTT...CTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCGAGTCCTCTCCCACGTaGCTGATCTTGGGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSESSPT*LILGAA
Trigger: TGCGGCCCCCAAGATCAGCAACGTGGGAGAGGACTC...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCATCTGGGGGCCGCCACTaGAGGGAGACCGTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPSGGRH*RETVVS
Trigger: TGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGA...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS GCA 90 bp GCCAGGCCGTACTTGTTGCTGGCGCTGATGTCACTGCCTCCGCGCTaGCAGCGCACCTTCACTCCTGCCCGCTCTGTCTCGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: ARPYLLLALMSLPPR*QRTFTPARSVSASN
Trigger: GTTCGAGGCCGAGACAGAGCGGGCAGGAGTGAAGGTGCGCTGGCAGCGCGGAGGCAGTGACATCAGCGCCAGCAACAAGTACGGCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS-3UTR CAA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAAGGTGCTGGCCCACCTaGCTGCTCAGGTCCACCCAT +
Preference number: 5 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPRCWPT*LLRSTH
Trigger: ATGGGTGGACCTGAGCAGCAAGGTGGGCCAGCACCT...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCCTTCAGCCATTTGACTaGCGCCCCCTCCTCCGATAC +
Preference number: 5 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVLQPFD*RPLLRY
Trigger: GTATCGGAGGAGGGGGCGCAAGTCAAATGGCTGAAG...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCCGTCCTTCAGCCATTaGACTTGCGCCCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAPSFSH*TCAPSS
Trigger: GGAGGAGGGGGCGCAAGTCAAATGGCTGAAGGACGG...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCACACCGCCTGGTCCTTaGCGCCCACCATCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPTPPGP*RPPSGL
Trigger: CAGACCTGATGGTGGGCGCAAAGGACCAGGCGGTGT...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCTCCATGAAGTGGAGCTaGGCTGACAGGTTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVSMKWS*ADRLQA
Trigger: CGCCTGCAACCTGTCAGCCAAGCTCCACTTCATGGA...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp GCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGCAGTCCAGGTGGATCTaGGGAGGTTCCTGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: AVAIQASCSHALWGPPLEQSRWI*GGSCLG
Trigger: ACCCAGGCAGGAACCTCCCAAGATCCACCTGGACTG...CTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAAGATGCTGCGGTCCTaGGTGGTCTCCACGCGGACC +
Preference number: 5 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPKMLRS*VVSTRT
Trigger: GGTCCGCGTGGAGACCACCAAGGACCGCAGCATCTT...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCGGCACGTCGATGACCTaGACTGTGAGGTTGACCTGG +
Preference number: 5 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVGTSMT*TVRLTW
Trigger: CCAGGTCAACCTCACAGTCAAGGTCATCGACGTGCC...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCGAGTCCTCTCCCACGTaGCTGATCTTGGGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPESSPT*LILGAA
Trigger: TGCGGCCCCCAAGATCAGCAACGTGGGAGAGGACTC...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAGGGGCTGGCATCCGGTaGTACCTGGCCATCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVGAGIR*YLAIPR
Trigger: CCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCC...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS TCA 90 bp TATGCCGTGTGCCCTCTGTGGCCAGGCCGTACTTGTTGCTGGCGCTaGTGTCACTGCCTCCGCGCTGCCAGCGCACCTTCACTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: YAVCPLWPGRTCCWR*CHCLRAASAPSLLP
Trigger: GGGCAGGAGTGAAGGTGCGCTGGCAGCGCGGAGGCAGTGACATCAGCGCCAGCAACAAGTACGGCCTGGCCACAGAGGGCACACGGCATA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 90 bp CTCGCACCTCCAGGCGGCACTCACACCGTGCCTCGCCCTGTAAGTTaGTGGCCCTGCAGACATAGATGCCCCCGTCAAAGGGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LAPPGGTHTVPRPVS*WPCRHRCPRQRGRA
Trigger: AGCCCTGCCCCTTTGACGGGGGCATCTATGTCTGCAGGGCCACCAACTTACAGGGCGAGGCACGGTGTGAGTGCCGCCTGGAGGTGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGTTGACCCTTTGGGACTaGGGGCACTTTCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SRPPAPTRSGGRHLRETVLTLWD*GHFLPA
Trigger: AGCTGGGAGAAAGTGCCCCAAGTCCCAAAGGGTCAA...CACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCCCAGGGGTAGGACCATaGAGAGCTGCTGAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSPGVGP*RAAELD
Trigger: GTCAAGCTCAGCAGCTCTCAATGGTCCTACCCCTGG...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCTCGCGCCTCATGCCCTaGAGCCTCTTTAGCATGCCG +
Preference number: 5 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPSRLMP*SLFSMP
Trigger: CGGCATGCTAAAGAGGCTCAAGGGCATGAGGCGCGA...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp ACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTCCGTCCTTCAGCCATTaGACTTGCGCCCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TRSGGRHLRETVVSETSSPSFSH*TCAPSS
Trigger: GGAGGAGGGGGCGCAAGTCAAATGGCTGAAGGACGG...AGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCTCGTCAATGGTCAGTTaGTGGACCCGCCCGATGTGG +
Preference number: 5 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSSSMVS*WTRPMW
Trigger: CCACATCGGGCGGGTCCACAAACTGACCATTGACGA...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCTCCATGAAGTGGAGCTaGGCTGACAGGTTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSSMKWS*ADRLQA
Trigger: CGCCTGCAACCTGTCAGCCAAGCTCCACTTCATGGA...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCGGCACGTCGATGACCTaGACTGTGAGGTTGACCTGG +
Preference number: 5 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSGTSMT*TVRLTW
Trigger: CCAGGTCAACCTCACAGTCAAGGTCATCGACGTGCC...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGCCCACGTTGCTGATCTaGGGGGCCGCAGGTGCGTCT +
Preference number: 5 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQPTLLI*GAAGAS
Trigger: AGACGCACCTGCGGCCCCCAAGATCAGCAACGTGGG...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCCAGGCCCTGCCATATaGTGTGCCCGCACTCGGAAA +
Preference number: 5 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPPGPAI*CARTRK
Trigger: TTTCCGAGTGCGGGCACACAATATGGCAGGGCCTGG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCAGGAAATCTTGGGCTaGGGGCTACCCCGGACAGCA +
Preference number: 5 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPQEILG*GLPRTA
Trigger: TGCTGTCCGGGGTAGCCCCAAGCCCAAGATTTCCTG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CCA 90 bp GCACCTCCAGGCGGCACTCACACCGTGCCTCGCCCTGTAAGTTGGTaGCCCTGCAGACATAGATGCCCCCGTCAAAGGGGCAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: APPGGTHTVPRPVSW*PCRHRCPRQRGRAF
Trigger: GAAAGCCCTGCCCCTTTGACGGGGGCATCTATGTCTGCAGGGCCACCAACTTACAGGGCGAGGCACGGTGTGAGTGCCGCCTGGAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CACGCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTACCTTGAGGTCGAACTaGACCTTGGAGGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: HAVAIQASCSHALWGPPLTLRSN*TLEEPA
Trigger: TGCTGGCTCCTCCAAGGTCAAGTTCGACCTCAAGGT...AAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCTTGCCCTTGAACCACTaGACCACAGGCGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPLPLNH*TTGGFR
Trigger: CCTGAAGCCGCCTGTGGTCAAGTGGTTCAAGGGCAA...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCACGGTCAGCCGGATCTaGTGGCCTTTGCTCACCTGG +
Preference number: 5 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLTVSRI*WPLLTW
Trigger: CCAGGTGAGCAAAGGCCACAAGATCCGGCTGACCGT...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCGTCCTTCAGCCATTaGACTTGCGCCCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVPSFSH*TCAPSS
Trigger: GGAGGAGGGGGCGCAAGTCAAATGGCTGAAGGACGG...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAACCTTGACTGTGAGGTaGACCTGGTCCTCGCCCACA +
Preference number: 5 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPTLTVR*TWSSPT
Trigger: TGTGGGCGAGGACCAGGTCAACCTCACAGTCAAGGT...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCACCTTGACTGTGAGGTaGACCTGGTCCTCGCCCACA +
Preference number: 5 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLATLTVR*TWSSPT
Trigger: TGTGGGCGAGGACCAGGTCAACCTCACAGTCAAGGT...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGAGTCCTCTCCCACGTaGCTGATCTTGGGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQESSPT*LILGAA
Trigger: TGCGGCCCCCAAGATCAGCAACGTGGGAGAGGACTC...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAGTGTCTGTGGGGCTGTaGCGGATGCTCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVVSVGL*RMLTSS
Trigger: CGAGGAGGTGAGCATCCGCAACAGCCCCACAGACAC...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCATAAAGACGGGCTCCTaGGTGGTGGCCGCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGIKTGS*VVAALS
Trigger: TGACAGAGCGGCCACCACCAAGGAGCCCGTCTTTAT...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATAAAGACGGGCTCCTaGGTGGTGGCCGCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAIKTGS*VVAALS
Trigger: TGACAGAGCGGCCACCACCAAGGAGCCCGTCTTTAT...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCGCCTGTCCCCAGACATaGTTTCTTGAGGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAACPQT*FLEATL
Trigger: GAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGC...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGCCTGTCCCCAGACATaGTTTCTTGAGGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPACPQT*FLEATL
Trigger: GAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGC...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS TCA 90 bp CTTCTCGCCACCCACCACGCACTGGTAGGCTGCGTCGTCCGCCAATaGGCACTGGCTGATGGTCAGGGTACGCTTGGCACCGATGGACTC +
Preference number: 5 (lower is better)
Translates to: LLATHHALVGCVVRQ*ALADGQGTLGTDGL
Trigger: GAGTCCATCGGTGCCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGACGACGCAGCCTACCAGTGCGTGGTGGGTGGCGAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 90 bp ACTTGCGCCCCCTCCTCCGATACTTCACACTCAAACTCCACCCGCTaGCCCACCATCACCAGCTGGTCCTCCAAGGGGCGCGTGATGAGC +
Preference number: 5 (lower is better)
Translates to: TCAPSSDTSHSNSTR*PTITSWSSKGRVMS
Trigger: GCTCATCACGCGCCCCTTGGAGGACCAGCTGGTGATGGTGGGGCAGCGGGTGGAGTTTGAGTGTGAAGTATCGGAGGAGGGGGCGCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 90 bp CTGCACAATGAGCTCAGCCAGCGCCTGGCCCCCGCTAGTGCACAGTaGATAGTGCCCCGCGTCCTCCAGCATGGCCTCGTTGATGATCAG +
Preference number: 5 (lower is better)
Translates to: LHNELSQRLAPASAQ*IVPRVLQHGLVDDQ
Trigger: CTGATCATCAACGAGGCCATGCTGGAGGACGCGGGGCACTATGCACTGTGCACTAGCGGGGGCCAGGCGCTGGCTGAGCTCATTGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS-3UTR CAA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCACTGACCGTGGCTTCTaGCTAAAAGCTGAGACTGGC +
Preference number: 5 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSTDRGF*LKAETG
Trigger: GCCAGTCTCAGCTTTTAGCAAGAAGCCACGGTCAGT...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAGCCAGGCCGTACTTGTaGCTGGCGCTGATGTCACTG +
Preference number: 5 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVARPYL*LALMSL
Trigger: CAGTGACATCAGCGCCAGCAACAAGTACGGCCTGGC...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCACCTTGAGGTCGAACTaGACCTTGGAGGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGTLRSN*TLEEPA
Trigger: TGCTGGCTCCTCCAAGGTCAAGTTCGACCTCAAGGT...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TACAGGCGTAAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAAGGTGCTGGCCCACCTaGCTGCTCAGGTCCACCCAT +
Preference number: 5 (lower is better)
Translates to: YRRKPSRLAALWAVLHAVRCWPT*LLRSTH
Trigger: ATGGGTGGACCTGAGCAGCAAGGTGGGCCAGCACCT...TACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTTACGCCTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp GCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCCATTCTTGAGCCATTaGACCTCAGCGTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: AIQASCSHALWGPPLEGDPFLSH*TSASWS
Trigger: TGACCATGACGCTGAGGTCAAATGGCTCAAGAATGG...GTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCTTCTTGAACCGGTATTaGAAGGTCTCCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSFLNRY*KVSSRV
Trigger: GACCCGGGAGGAGACCTTCAAATACCGGTTCAAGAA...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGGGTGGGACACCGCCTGGTCCTTaGCGCCCACCATCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: PLEGDRGVRDVLYCQVGGTPPGP*RPPSGL
Trigger: CAGACCTGATGGTGGGCGCAAAGGACCAGGCGGTGT...CCCACCCACCTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp GCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCTCTGAGACCTCACATTaGAACACCGCCTGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: ASCSHALWGPPLEGDRGVSETSH*NTAWSF
Trigger: AAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAGA...GACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCTCGTCAATGGTCAGTTaGTGGACCCGCCCGATGTGG +
Preference number: 5 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLSSMVS*WTRPMW
Trigger: CCACATCGGGCGGGTCCACAAACTGACCATTGACGA...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCAGCTTGGCTGACAGGTaGCAGGCGAAGCCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLISLADR*QAKPSG
Trigger: GCCCGAGGGCTTCGCCTGCAACCTGTCAGCCAAGCT...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGTCACACAGCAGCTTCTaGTCAAACACCCACTCATCG +
Preference number: 5 (lower is better)
Translates to: SRPPAPTRSGGRHLRETVSHSSF*SNTHSS
Trigger: CGATGAGTGGGTGTTTGACAAGAAGCTGCTGTGTGA...CACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACCCACGTTGCTGATCTaGGGGGCCGCAGGTGCGTCT +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPPTLLI*GAAGAS
Trigger: AGACGCACCTGCGGCCCCCAAGATCAGCAACGTGGG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCACGTTGCTGATCTaGGGGGCCGCAGGTGCGTCT +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLIPTLLI*GAAGAS
Trigger: AGACGCACCTGCGGCCCCCAAGATCAGCAACGTGGG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACGAGTCCTCTCCCACGTaGCTGATCTTGGGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHESSPT*LILGAA
Trigger: TGCGGCCCCCAAGATCAGCAACGTGGGAGAGGACTC...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACGTGTCTGTGGGGCTGTaGCGGATGCTCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHVSVGL*RMLTSS
Trigger: CGAGGAGGTGAGCATCCGCAACAGCCCCACAGACAC...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGATCCTGGGGAGGACTaGGCTTGTCAACAACCTGCA +
Preference number: 5 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPDPGED*ACQQPA
Trigger: TGCAGGTTGTTGACAAGCCAAGTCCTCCCCAGGATC...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGAGCAGGTCCAGGCCATTCTaGAACCAGGAAATCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PGSWHGAGIRLYLAIPRSRSRPF*NQEILG
Trigger: GCCCAAGATTTCCTGGTTCAAGAATGGCCTGGACCT...GCTCCTGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGACTCAAAGATGTACTaGCTGCCGCTCATCTGGATC +
Preference number: 5 (lower is better)
Translates to: SRPPAPTRSGGRHLRETVDSKMY*LPLIWI
Trigger: GATCCAGATGAGCGGCAGCAAGTACATCTTTGAGTC...CACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS CCA 90 bp TCACAGGCTCCCCGACCTTCTTCTGAATGGTCTGGCGCAGGTGCCTaGGCAGCTGAAGCCGTGGCCGTTGCAGGATCTCCTGCACTGTCA +
Preference number: 5 (lower is better)
Translates to: SQAPRPSSEWSGAGA*AAEAVAVAGSPALS
Trigger: TGACAGTGCAGGAGATCCTGCAACGGCCACGGCTTCAGCTGCCCAGGCACCTGCGCCAGACCATTCAGAAGAAGGTCGGGGAGCCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CCA 90 bp GTAGCCCGCGATGACCGAGCGGTTCACCAGGGGCTGGGTGAAGCTTaGGGCCTCGGAGAAGTCCAGGGCCTTATAGTTGGGTGGCTCATA +
Preference number: 5 (lower is better)
Translates to: VARDDRAVHQGLGEA*GLGEVQGLIVGWLI
Trigger: TATGAGCCACCCAACTATAAGGCCCTGGACTTCTCCGAGGCCCCAAGCTTCACCCAGCCCCTGGTGAACCGCTCGGTCATCGCGGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGGTCGAACTTGACCTaGGAGGAGCCAGCAATGACT +
Preference number: 5 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPRSNLT*EEPAMT
Trigger: AGTCATTGCTGGCTCCTCCAAGGTCAAGTTCGACCT...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp ATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGGCCTCGCTGAGCTTGACCCTTaGGGACTTGGGGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: IAPGSPLGSTPRCSHPGLAELDP*GLGALS
Trigger: AGAAAGTGCCCCAAGTCCCAAAGGGTCAAGCTCAGC...GAGGCCTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCAGGTGCTGGCCCACCTaGCTGCTCAGGTCCACCCAT +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLIRCWPT*LLRSTH
Trigger: ATGGGTGGACCTGAGCAGCAAGGTGGGCCAGCACCT...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAAGGTGCTGGCCCACCTaGCTGCTCAGGTCCACCCAT +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPRCWPT*LLRSTH
Trigger: ATGGGTGGACCTGAGCAGCAAGGTGGGCCAGCACCT...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCAGTCAAATTTGTCCTaGGTGGACACCTCACAGCGG +
Preference number: 5 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGQSNLS*VDTSQR
Trigger: CCGCTGTGAGGTGTCCACCAAGGACAAATTTGACTG...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCCAGTCAAATTTGTCCTaGGTGGACACCTCACAGCGG +
Preference number: 5 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPQSNLS*VDTSQR
Trigger: CCGCTGTGAGGTGTCCACCAAGGACAAATTTGACTG...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCTCCTGGCCATTCTaGAGCCATTTGACCTCAGCG +
Preference number: 5 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAISWPF*SHLTSA
Trigger: CGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGAT...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCTTCTTGAACCGGTATTaGAAGGTCTCCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLAFLNRY*KVSSRV
Trigger: GACCCGGGAGGAGACCTTCAAATACCGGTTCAAGAA...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCTCTGCCCGTCCTTCTaGAACCGGTATTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PNFPPGSWHGAGIRLYLALCPSF*NRYLKV
Trigger: GACCTTCAAATACCGGTTCAAGAAGGACGGGCAGAG...GGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAACACCGCCTGGTCCTTaGCGCCCACCATCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPTPPGP*RPPSGL
Trigger: CAGACCTGATGGTGGGCGCAAAGGACCAGGCGGTGT...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTATCGTCAATGGTCAGTTaGTGGACCCGCCCGATGTGG +
Preference number: 5 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVSSMVS*WTRPMW
Trigger: CCACATCGGGCGGGTCCACAAACTGACCATTGACGA...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGACCTTGACTGTGAGGTaGACCTGGTCCTCGCCCACA +
Preference number: 5 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQTLTVR*TWSSPT
Trigger: TGTGGGCGAGGACCAGGTCAACCTCACAGTCAAGGT...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACCCAGGCCCTGCCATATaGTGTGCCCGCACTCGGAAA +
Preference number: 5 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHPGPAI*CARTRK
Trigger: TTTCCGAGTGCGGGCACACAATATGGCAGGGCCTGG...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGGTGTCTGTGGGGCTGTaGCGGATGCTCACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: CGPVCATPTQDCPTTALLVSVGL*RMLTSS
Trigger: CGAGGAGGTGAGCATCCGCAACAGCCCCACAGACAC...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCACTCCATGGTCTTCTaGTCGGCTTTCTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGHSMVF*SAFCTV
Trigger: CACAGTGCAGAAAGCCGACAAGAAGACCATGGAGTG...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS TCA 90 bp CGAAGCCCTCGGGCACAAAGCTGTAGTCAGCCTCGTCGGCAGGTGTaGCGTCGTCAATGGTCAGTTTGTGGACCCGCCCGATGTGGGACA +
Preference number: 5 (lower is better)
Translates to: RSPRAQSCSQPRRQV*RRQWSVCGPARCGT
Trigger: TGTCCCACATCGGGCGGGTCCACAAACTGACCATTGACGACGTCACACCTGCCGACGAGGCTGACTACAGCTTTGTGCCCGAGGGCTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 90 bp CAACAACCTGCAGCACCAGCGTGGCCTTGTCCTCCATGTTCTCAATaGGCACCGTCACCTGGTAAGTGCCTGAATGCACGCGGCGAGCGG +
Preference number: 5 (lower is better)
Translates to: QQPAAPAWPCPPCSQ*APSPGKCLNARGER
Trigger: CCGCTCGCCGCGTGCATTCAGGCACTTACCAGGTGACGGTGCGCATTGAGAACATGGAGGACAAGGCCACGCTGGTGCTGCAGGTTGTTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAACCTTGAGGTCGAACTaGACCTTGGAGGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVTLRSN*TLEEPA
Trigger: TGCTGGCTCCTCCAAGGTCAAGTTCGACCTCAAGGT...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATCCAGGGGTAGGACCATaGAGAGCTGCTGAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: HADGVDRVDAHLVHHALDPGVGP*RAAELD
Trigger: GTCAAGCTCAGCAGCTCTCAATGGTCCTACCCCTGG...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATTTGCCCTTGAACCACTaGACCACAGGCGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: HADGVDRVDAHLVHHALDLPLNH*TTGGFR
Trigger: CCTGAAGCCGCCTGTGGTCAAGTGGTTCAAGGGCAA...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGTCGCGCCTCATGCCCTaGAGCCTCTTTAGCATGCCG +
Preference number: 5 (lower is better)
Translates to: CGPVCATPTQDCPTTALLSRLMP*SLFSMP
Trigger: CGGCATGCTAAAGAGGCTCAAGGGCATGAGGCGCGA...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAACGGTCAGCCGGATCTaGTGGCCTTTGCTCACCTGG +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPTVSRI*WPLLTW
Trigger: CCAGGTGAGCAAAGGCCACAAGATCCGGCTGACCGT...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGACGGTCAGCCGGATCTaGTGGCCTTTGCTCACCTGG +
Preference number: 5 (lower is better)
Translates to: CGPVCATPTQDCPTTALLTVSRI*WPLLTW
Trigger: CCAGGTGAGCAAAGGCCACAAGATCCGGCTGACCGT...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCCATTCTTGAGCCATTaGACCTCAGCGTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGPFLSH*TSASWS
Trigger: TGACCATGACGCTGAGGTCAAATGGCTCAAGAATGG...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTATCCAGCATGGCCTCGTaGATGATCAGGTGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVSSMAS*MIRWCL
Trigger: GAGACACCACCTGATCATCAACGAGGCCATGCTGGA...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCGGTACGAAGTCAATCTaGACCTCCATGAAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGGTKSI*TSMKWS
Trigger: GCTCCACTTCATGGAGGTCAAGATTGACTTCGTACC...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGCAGTCCAGGTGGATCTaGGGAGGTTCCTGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: CGPVCATPTQDCPTTALLQSRWI*GGSCLG
Trigger: ACCCAGGCAGGAACCTCCCAAGATCCACCTGGACTG...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCTCACACAGCAGCTTCTaGTCAAACACCCACTCATCG +
Preference number: 5 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGSHSSF*SNTHSS
Trigger: CGATGAGTGGGTGTTTGACAAGAAGCTGCTGTGTGA...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCAGGCCCTGCCATATaGTGTGCCCGCACTCGGAAA +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLIPGPAI*CARTRK
Trigger: TTTCCGAGTGCGGGCACACAATATGGCAGGGCCTGG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGCTGAAGCCGTGGCCGTaGCAGGATCTCCTGCACTGT +
Preference number: 5 (lower is better)
Translates to: CGPVCATPTQDCPTTALLLKPWP*QDLLHC
Trigger: ACAGTGCAGGAGATCCTGCAACGGCCACGGCTTCAG...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCAGGAAATCTTGGGCTaGGGGCTACCCCGGACAGCA +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLIQEILG*GLPRTA
Trigger: TGCTGTCCGGGGTAGCCCCAAGCCCAAGATTTCCTG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGCAGGAAATCTTGGGCTaGGGGCTACCCCGGACAGCA +
Preference number: 5 (lower is better)
Translates to: CGPVCATPTQDCPTTALLQEILG*GLPRTA
Trigger: TGCTGTCCGGGGTAGCCCCAAGCCCAAGATTTCCTG...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCAGACTCAAAGATGTACTaGCTGCCGCTCATCTGGATC +
Preference number: 5 (lower is better)
Translates to: SLQAPGTGLASGCTWPSPDSKMY*LPLIWI
Trigger: GATCCAGATGAGCGGCAGCAAGTACATCTTTGAGTC...TGGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399249.6
ENST00000545968.6
CDS TCA 90 bp CCACCACGCACTGGTAGGCTGCGTCGTCCGCCAATGAGCACTGGCTaGTGGTCAGGGTACGCTTGGCACCGATGGACTCAAAGATGTACC +
Preference number: 5 (lower is better)
Translates to: PPRTGRLRRPPMSTG*WSGYAWHRWTQRCT
Trigger: GGTACATCTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGACGACGCAGCCTACCAGTGCGTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256993.8
CDS CCA 90 bp GCTTTCTGCACTGTGTACCCCCAGAGCTCCGTGTTGCCGACATCCTaGGGTGGCTTCCACTCCAGAGCCACATTAAGACCCCAGGCGTCA +
Preference number: 5 (lower is better)
Translates to: AFCTVYPQSSVLPTS*GGFHSRATLRPQAS
Trigger: TGACGCCTGGGGTCTTAATGTGGCTCTGGAGTGGAAGCCACCCCAGGATGTCGGCAACACGGAGCTCTGGGGGTACACAGTGCAGAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTACTGACCGTGGCTTCTaGCTAAAAGCTGAGACTGGC +
Preference number: 5 (lower is better)
Translates to: RSGGRHLRETVVSETSSTTDRGF*LKAETG
Trigger: GCCAGTCTCAGCTTTTAGCAAGAAGCCACGGTCAGT...AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATTGCCCTTGAACCACTaGACCACAGGCGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPLPLNH*TTGGFR
Trigger: CCTGAAGCCGCCTGTGGTCAAGTGGTTCAAGGGCAA...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CGCTCTGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTCAGTCAAATTTGTCCTaGGTGGACACCTCACAGCGG +
Preference number: 5 (lower is better)
Translates to: RSGGRHLRETVVSETSSTQSNLS*VDTSQR
Trigger: CCGCTGTGAGGTGTCCACCAAGGACAAATTTGACTG...AGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp CACGCTGTAGCCATCCAGGCCTCCTGCTCCCACGCGCTCTGGGGGCCGCCACTTTCGTGGACAGTGAGATaGAAGTTGGAGCAGTCAAAT +
Preference number: 5 (lower is better)
Translates to: HAVAIQASCSHALWGPPLSWTVR*KLEQSN
Trigger: ATTTGACTGCTCCAACTTCAATCTCACTGTCCACGA...AAGTGGCGGCCCCCAGAGCGCGTGGGAGCAGGAGGCCTGGATGGCTACAGCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAATCTCCTGGCCATTCTaGAGCCATTTGACCTCAGCG +
Preference number: 5 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVISWPF*SHLTSA
Trigger: CGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGAT...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATATGGTCAGGGTACGCTaGGCACCGATGGACTCAAAG +
Preference number: 5 (lower is better)
Translates to: HADGVDRVDAHLVHHALDMVRVR*APMDSK
Trigger: CTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCAT...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCTTCAGCCATTTGACTaGCGCCCCCTCCTCCGATAC +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLILQPFD*RPLLRY
Trigger: GTATCGGAGGAGGGGGCGCAAGTCAAATGGCTGAAG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACTTCAGCCATTTGACTaGCGCCCCCTCCTCCGATAC +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPLQPFD*RPLLRY
Trigger: GTATCGGAGGAGGGGGCGCAAGTCAAATGGCTGAAG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TGGGGGCCGCCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGTTCTTGAACCGGTATTaGAAGGTCTCCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: WGPPLEGDRGVRDVLYCQFLNRY*KVSSRV
Trigger: GACCCGGGAGGAGACCTTCAAATACCGGTTCAAGAA...CTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGGCGGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp AAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTAGCCATCCAGCTCTGCCCGTCCTTCTaGAACCGGTATTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: KPSRLAALWAVLHAVAIQLCPSF*NRYLKV
Trigger: GACCTTCAAATACCGGTTCAAGAAGGACGGGCAGAG...CTGGATGGCTACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp TACAGGCGTAAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTATCCAGCATGGCCTCGTaGATGATCAGGTGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: YRRKPSRLAALWAVLHAVSSMAS*MIRWCL
Trigger: GAGACACCACCTGATCATCAACGAGGCCATGCTGGA...TACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTTACGCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCAAGATGCTGCGGTCCTaGGTGGTCTCCACGCGGACC +
Preference number: 5 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSKMLRS*VVSTRT
Trigger: GGTCCGCGTGGAGACCACCAAGGACCGCAGCATCTT...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCACCTTGACTGTGAGGTaGACCTGGTCCTCGCCCACA +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLITLTVR*TWSSPT
Trigger: TGTGGGCGAGGACCAGGTCAACCTCACAGTCAAGGT...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAGGCACGTCGATGACCTaGACTGTGAGGTTGACCTGG +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPGTSMT*TVRLTW
Trigger: CCAGGTCAACCTCACAGTCAAGGTCATCGACGTGCC...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCCCCAGAGCTCCGTGTaGCCGACATCCTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRPQSSV*PTSWGG
Trigger: GCCACCCCAGGATGTCGGCAACACGGAGCTCTGGGG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCCAGAGCTCCGTGTaGCCGACATCCTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPPQSSV*PTSWGG
Trigger: GCCACCCCAGGATGTCGGCAACACGGAGCTCTGGGG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATTGAACCAGGAAATCTaGGGCTTGGGGCTACCCCGG +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPLNQEI*GLGLPR
Trigger: CCGGGGTAGCCCCAAGCCCAAGATTTCCTGGTTCAA...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGTTGAACCAGGAAATCTaGGGCTTGGGGCTACCCCGG +
Preference number: 5 (lower is better)
Translates to: CGPVCATPTQDCPTTALLLNQEI*GLGLPR
Trigger: CCGGGGTAGCCCCAAGCCCAAGATTTCCTGGTTCAA...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTAAGGTCCAGGCCATTCTaGAACCAGGAAATCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVRSRPF*NQEILG
Trigger: GCCCAAGATTTCCTGGTTCAAGAATGGCCTGGACCT...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAGTCAACACTCCCTGCTaGCTGAACATGCGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPVNTPC*LNMRKR
Trigger: CCGCTTCCGCATGTTCAGCAAGCAGGGAGTGTTGAC...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGGTCAACACTCCCTGCTaGCTGAACATGCGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: CGPVCATPTQDCPTTALLVNTPC*LNMRKR
Trigger: CCGCTTCCGCATGTTCAGCAAGCAGGGAGTGTTGAC...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCCATCCCCGCACAGGAGACACACTaGTCACACATACATCCAACA +
Preference number: 5 (lower is better)
Translates to: FPPGSWHGAGIRLYLAIPAQETH*SHIHPT
Trigger: TGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC...GGGGATGGCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS TCA 90 bp CTTGTCCTCCATGTTCTCAATGCGCACCGTCACCTGGTAAGTGCCTaGATGCACGCGGCGAGCGGCCCGGATGAACAGGATGGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: LVLHVLNAHRHLVSA*MHAASGPDEQDGVC
Trigger: ACAGACACCATCCTGTTCATCCGGGCCGCTCGCCGCGTGCATTCAGGCACTTACCAGGTGACGGTGCGCATTGAGAACATGGAGGACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS TCA 90 bp CCACCACGCACTGGTAGGCTGCGTCGTCCGCCAATGAGCACTGGCTaGTGGTCAGGGTACGCTTGGCACCGATGGACTCAAAGATGTACT +
Preference number: 5 (lower is better)
Translates to: PPRTGRLRRPPMSTG*WSGYAWHRWTQRCT
Trigger: AGTACATCTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGACGACGCAGCCTACCAGTGCGTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 90 bp CGTCAATGGTCAGTTTGTGGACCCGCCCGATGTGGGACACCTTTATaGGGCTGTCGGGCACCAGCTCCTTCCCATTCTTCAGCCACACAC +
Preference number: 5 (lower is better)
Translates to: RQWSVCGPARCGTPL*GCRAPAPSHSSATH
Trigger: GTGTGTGGCTGAAGAATGGGAAGGAGCTGGTGCCCGACAGCCGCATAAAGGTGTCCCACATCGGGCGGGTCCACAAACTGACCATTGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 90 bp AGGGTTCTTCACTGTGACCGTGTAGACGCCCTCATCTTCCTTCTCTaGCCCCTCGACCGTGAAGATGCTGCGGTCCTTGGTGGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: RVLHCDRVDALIFLL*PLDREDAAVLGGLH
Trigger: GTGGAGACCACCAAGGACCGCAGCATCTTCACGGTCGAGGGGGCAGAGAAGGAAGATGAGGGCGTCTACACGGTCACAGTGAAGAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS-3UTR CAA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATAGGTCGAACTTGACCTaGGAGGAGCCAGCAATGACT +
Preference number: 5 (lower is better)
Translates to: HADGVDRVDAHLVHHALDRSNLT*EEPAMT
Trigger: AGTCATTGCTGGCTCCTCCAAGGTCAAGTTCGACCT...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCACCTTGAGGTCGAACTaGACCTTGGAGGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLITLRSN*TLEEPA
Trigger: TGCTGGCTCCTCCAAGGTCAAGTTCGACCTCAAGGT...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGTTGACCCTTTGGGACTaGGGGCACTTTCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: CGPVCATPTQDCPTTALLLTLWD*GHFLPA
Trigger: AGCTGGGAGAAAGTGCCCCAAGTCCCAAAGGGTCAA...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCAGCTGAGCTTGACCCTTaGGGACTTGGGGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPAELDP*GLGALS
Trigger: AGAAAGTGCCCCAAGTCCCAAAGGGTCAAGCTCAGC...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTACCTGGCTCGTGGACAGTGAGATaGAAGTTGGAGCAGTCAAAT +
Preference number: 5 (lower is better)
Translates to: PQLPSRLLARGWHPVVPGSWTVR*KLEQSN
Trigger: ATTTGACTGCTCCAACTTCAATCTCACTGTCCACGA...GCCAGGTACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CATGCCGATGGCGTTGACCGCGTAGACGCGCATCTCGTACACCACGCCCTCGATATCTCCTGGCCATTCTaGAGCCATTTGACCTCAGCG +
Preference number: 5 (lower is better)
Translates to: HADGVDRVDAHLVHHALDISWPF*SHLTSA
Trigger: CGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGAT...ATCGAGGGCGTGGTGTACGAGATGCGCGTCTACGCGGTCAACGCCATCGGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp AACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCATCGCAGCACTTCTTGAACCGGTATTaGAAGGTCTCCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: NTHSGLPDNCPADPPSQHFLNRY*KVSSRV
Trigger: GACCCGGGAGGAGACCTTCAAATACCGGTTCAAGAA...GTGCTGCGATGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCTCCAGCATGGCCTCGTaGATGATCAGGTGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLISSMAS*MIRWCL
Trigger: GAGACACCACCTGATCATCAACGAGGCCATGCTGGA...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTATCTGAGACCTCACATTaGAACACCGCCTGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVSETSH*NTAWSF
Trigger: AAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAGA...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGAGCTTGGCTGACAGGTaGCAGGCGAAGCCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRSLADR*QAKPSG
Trigger: GCCCGAGGGCTTCGCCTGCAACCTGTCAGCCAAGCT...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGGTTTCCCCAACTTCCCTCCAGGCTCCTGGCACGGGGCTGGCATCCGGTTGTATCACACAGCAGCTTCTaGTCAAACACCCACTCATCG +
Preference number: 5 (lower is better)
Translates to: GFPQLPSRLLARGWHPVVSHSSF*SNTHSS
Trigger: CGATGAGTGGGTGTTTGACAAGAAGCTGCTGTGTGA...TACAACCGGATGCCAGCCCCGTGCCAGGAGCCTGGAGGGAAGTTGGGGAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGCCCACGTTGCTGATCTaGGGGGCCGCAGGTGCGTCT +
Preference number: 5 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRPTLLI*GAAGAS
Trigger: AGACGCACCTGCGGCCCCCAAGATCAGCAACGTGGG...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAATCTGGGGGCCGCCACTaGAGGGAGACCGTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQSGGRH*RETVVS
Trigger: TGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGA...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCTCTGGGGGCCGCCACTaGAGGGAGACCGTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPSGGRH*RETVVS
Trigger: TGACACCACGGTCTCCCTCAAGTGGCGGCCCCCAGA...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp TGTGGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGGATCCTGGGGAGGACTaGGCTTGTCAACAACCTGCA +
Preference number: 5 (lower is better)
Translates to: CGPVCATPTQDCPTTALLDPGED*ACQQPA
Trigger: TGCAGGTTGTTGACAAGCCAAGTCCTCCCCAGGATC...CAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS GCA 90 bp TGCTCCAAGACGGTGAACCACTCCATGGTCTTCTTGTCGGCTTTCTaGACTGTGTACCCCCAGAGCTCCGTGTTGCCGACATCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: CSKTVNHSMVFLSAF*TVYPQSSVLPTSWG
Trigger: ACCCCAGGATGTCGGCAACACGGAGCTCTGGGGGTACACAGTGCAGAAAGCCGACAAGAAGACCATGGAGTGGTTCACCGTCTTGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CCA 90 bp AACACCGCCTGGTCCTTTGCGCCCACCATCAGGTCTGCGATGCTCTaGTACACCTCCAGCTTCTTTTCCTGCACAATGAGCTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: NTAWSFAPTIRSAML*YTSSFFSCTMSSAS
Trigger: GCTGGCTGAGCTCATTGTGCAGGAAAAGAAGCTGGAGGTGTACCAGAGCATCGCAGACCTGATGGTGGGCGCAAAGGACCAGGCGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 90 bp CTGGCTGAAGACGCGGAAGTAGTAGCCATTGCCAATGATGAGCTCTaGCACCACGCAGTGGGTGCGGCGGTAATGCTCCAAGACGGTGAA +
Preference number: 5 (lower is better)
Translates to: LAEDAEVVAIANDEL*HHAVGAAVMLQDGE
Trigger: TTCACCGTCTTGGAGCATTACCGCCGCACCCACTGCGTGGTGCCAGAGCTCATCATTGGCAATGGCTACTACTTCCGCGTCTTCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCACTGACCGTGGCTTCTaGCTAAAAGCTGAGACTGGC +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLITDRGF*LKAETG
Trigger: GCCAGTCTCAGCTTTTAGCAAGAAGCCACGGTCAGT...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCCGTCCTTCAGCCATTaGACTTGCGCCCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPPSFSH*TCAPSS
Trigger: GGAGGAGGGGGCGCAAGTCAAATGGCTGAAGGACGG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACTCTGCCCGTCCTTCTaGAACCGGTATTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPLCPSF*NRYLKV
Trigger: GACCTTCAAATACCGGTTCAAGAAGGACGGGCAGAG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCTCTGCCCGTCCTTCTaGAACCGGTATTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLILCPSF*NRYLKV
Trigger: GACCTTCAAATACCGGTTCAAGAAGGACGGGCAGAG...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCACTTGAGGGAGACCGTGGTGTCAGAGACGTCCTCTACTGCCAGGTGGGTGGGGGTACGAAGTCAATCTaGACCTCCATGAAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PLEGDRGVRDVLYCQVGGGTKSI*TSMKWS
Trigger: GCTCCACTTCATGGAGGTCAAGATTGACTTCGTACC...CCCACCCACCTGGCAGTAGAGGACGTCTCTGACACCACGGTCTCCCTCAAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAAAGATGCTGCGGTCCTaGGTGGTCTCCACGCGGACC +
Preference number: 5 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQKMLRS*VVSTRT
Trigger: GGTCCGCGTGGAGACCACCAAGGACCGCAGCATCTT...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACACTCCATGGTCTTCTaGTCGGCTTTCTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPHSMVF*SAFCTV
Trigger: CACAGTGCAGAAAGCCGACAAGAAGACCATGGAGTG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGCCTGTCCCCAGACATaGTTTCTTGAGGCCACCCTC +
Preference number: 5 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSACPQT*FLEATL
Trigger: GAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS GCA 90 bp CCAGACGTAGCTTATTTCCAGCTACAACCACAATGGTGTCTGGTATaGGGCCTGGGCAGTCCAGGTGGATCTTGGGAGGTTCCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PDVAYFQLQPQWCLV*GLGSPGGSWEVPAW
Trigger: CCAGGCAGGAACCTCCCAAGATCCACCTGGACTGCCCAGGCCGCATACCAGACACCATTGTGGTTGTAGCTGGAAATAAGCTACGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS-3UTR CAA 90 bp TACAGGCGTAAGCCATCGCGCCTGGCAGCCCTCTGGGCAGTACTCCACGCTGTATTGGAGCAGTCAAATTaGTCCTTGGTGGACACCTCA +
Preference number: 5 (lower is better)
Translates to: YRRKPSRLAALWAVLHAVLEQSN*SLVDTS
Trigger: TGAGGTGTCCACCAAGGACAAATTTGACTGCTCCAA...TACAGCGTGGAGTACTGCCCAGAGGGCTGCCAGGCGCGATGGCTTACGCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS-3UTR CAA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCGCGCCTCATGCCCTaGAGCCTCTTTAGCATGCCG +
Preference number: 5 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQSRLMP*SLFSMP
Trigger: CGGCATGCTAAAGAGGCTCAAGGGCATGAGGCGCGA...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGACGGTCAGCCGGATCTaGTGGCCTTTGCTCACCTGG +
Preference number: 5 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRTVSRI*WPLLTW
Trigger: CCAGGTGAGCAAAGGCCACAAGATCCGGCTGACCGT...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp AGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCCCCCACCATTCTTGAGCCATTaGACCTCAGCGTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: SLCNTHSGLPDNCPADPPPFLSH*TSASWS
Trigger: TGACCATGACGCTGAGGTCAAATGGCTCAAGAATGG...TGGGGGATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCATGGTCAGGGTACGCTaGGCACCGATGGACTCAAAG +
Preference number: 5 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSMVRVR*APMDSK
Trigger: CTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCAT...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCCAGGTGGATCTaGGGAGGTTCCTGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQQSRWI*GGSCLG
Trigger: ACCCAGGCAGGAACCTCCCAAGATCCACCTGGACTG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCTGAAGCCGTGGCCGTaGCAGGATCTCCTGCACTGT +
Preference number: 5 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPLKPWP*QDLLHC
Trigger: ACAGTGCAGGAGATCCTGCAACGGCCACGGCTTCAG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS TCA 90 bp TCTTCAGCCACACACCCCGAACATTCTCATCTGAGACCTCACATTTaGACACCGCCTGGTCCTTTGCGCCCACCATCAGGTCTGCGATGC +
Preference number: 5 (lower is better)
Translates to: SSATHPEHSHLRPHI*TPPGPLRPPSGLRC
Trigger: GCATCGCAGACCTGATGGTGGGCGCAAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAGATGAGAATGTTCGGGGTGTGTGGCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 90 bp ACACCCCGAACATTCTCATCTGAGACCTCACATTTGAACACCGCCTaGTCCTTTGCGCCCACCATCAGGTCTGCGATGCTCTGGTACACC +
Preference number: 5 (lower is better)
Translates to: TPRTFSSETSHLNTA*SFAPTIRSAMLWYT
Trigger: GGTGTACCAGAGCATCGCAGACCTGATGGTGGGCGCAAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAGATGAGAATGTTCGGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS-3UTR CAA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACCAGGGGTAGGACCATaGAGAGCTGCTGAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQPGVGP*RAAELD
Trigger: GTCAAGCTCAGCAGCTCTCAATGGTCCTACCCCTGG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAATTGCCCTTGAACCACTaGACCACAGGCGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQLPLNH*TTGGFR
Trigger: CCTGAAGCCGCCTGTGGTCAAGTGGTTCAAGGGCAA...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACTTCAGCCATTTGACTaGCGCCCCCTCCTCCGATAC +
Preference number: 5 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQLQPFD*RPLLRY
Trigger: GTATCGGAGGAGGGGGCGCAAGTCAAATGGCTGAAG...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGTCGTCAATGGTCAGTTaGTGGACCCGCCCGATGTGG +
Preference number: 5 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRSSMVS*WTRPMW
Trigger: CCACATCGGGCGGGTCCACAAACTGACCATTGACGA...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATCCATGAAGTGGAGCTaGGCTGACAGGTTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPSMKWS*ADRLQA
Trigger: CGCCTGCAACCTGTCAGCCAAGCTCCACTTCATGGA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCAGTCCAGGTGGATCTaGGGAGGTTCCTGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSQSRWI*GGSCLG
Trigger: ACCCAGGCAGGAACCTCCCAAGATCCACCTGGACTG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCTGAAGCCGTGGCCGTaGCAGGATCTCCTGCACTGT +
Preference number: 5 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSLKPWP*QDLLHC
Trigger: ACAGTGCAGGAGATCCTGCAACGGCCACGGCTTCAG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAATTGAACCAGGAAATCTaGGGCTTGGGGCTACCCCGG +
Preference number: 5 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQLNQEI*GLGLPR
Trigger: CCGGGGTAGCCCCAAGCCCAAGATTTCCTGGTTCAA...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCAGGTCCAGGCCATTCTaGAACCAGGAAATCTTGGGC +
Preference number: 5 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSRSRPF*NQEILG
Trigger: GCCCAAGATTTCCTGGTTCAAGAATGGCCTGGACCT...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGACCAGTCTGTGCAACACCCACTCAGGACTGCCCGACAACTGCCCTGCTGATCGCACAGGAGACACACTaGTCACACATACATCCAACA +
Preference number: 5 (lower is better)
Translates to: GPVCATPTQDCPTTALLIAQETH*SHIHPT
Trigger: TGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC...GATCAGCAGGGCAGTTGTCGGGCAGTCCTGAGTGGGTGTTGCACAGACTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CCA 90 bp CCGATGGACTCAAAGATGTACCTGCTGCCGCTCATCTGGATCTCCTaGCCATTCTTGAGCCATTTGACCTCAGCGTCATGGTCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: PMDSKMYLLPLIWIS*PFLSHLTSASWSAS
Trigger: ACTGGCTGACCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAGGTACATCTTTGAGTCCATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256993.8
CDS-3UTR CAA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATTGACCCTTTGGGACTaGGGGCACTTTCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPLTLWD*GHFLPA
Trigger: AGCTGGGAGAAAGTGCCCCAAGTCCCAAAGGGTCAA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCGCTGAGCTTGACCCTTaGGGACTTGGGGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPAELDP*GLGALS
Trigger: AGAAAGTGCCCCAAGTCCCAAAGGGTCAAGCTCAGC...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGGCTGAGCTTGACCCTTaGGGACTTGGGGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQAELDP*GLGALS
Trigger: AGAAAGTGCCCCAAGTCCCAAAGGGTCAAGCTCAGC...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCCAGGGGTAGGACCATaGAGAGCTGCTGAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSPGVGP*RAAELD
Trigger: GTCAAGCTCAGCAGCTCTCAATGGTCCTACCCCTGG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAATGGTCAGGGTACGCTaGGCACCGATGGACTCAAAG +
Preference number: 5 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQMVRVR*APMDSK
Trigger: CTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCAT...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCTGCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAAGATCCTGGGGAGGACTaGGCTTGTCAACAACCTGCA +
Preference number: 5 (lower is better)
Translates to: PADPPSQHRRHTCHTYIQDPGED*ACQQPA
Trigger: TGCAGGTTGTTGACAAGCCAAGTCCTCCCCAGGATC...TTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTATAAAGACGGGCTCCTaGGTGGTGGCCGCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSIKTGS*VVAALS
Trigger: TGACAGAGCGGCCACCACCAAGGAGCCCGTCTTTAT...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CCA 90 bp CCGATGGACTCAAAGATGTACTTGCTGCCGCTCATCTGGATCTCCTaGCCATTCTTGAGCCATTTGACCTCAGCGTCATGGTCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: PMDSKMYLLPLIWIS*PFLSHLTSASWSAS
Trigger: ACTGGCTGACCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAAGTACATCTTTGAGTCCATCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS-3UTR CAA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCAAGGTCGAACTTGACCTaGGAGGAGCCAGCAATGACT +
Preference number: 5 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPRSNLT*EEPAMT
Trigger: AGTCATTGCTGGCTCCTCCAAGGTCAAGTTCGACCT...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGAGGTCGAACTTGACCTaGGAGGAGCCAGCAATGACT +
Preference number: 5 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRRSNLT*EEPAMT
Trigger: AGTCATTGCTGGCTCCTCCAAGGTCAAGTTCGACCT...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTTTGACCCTTTGGGACTaGGGGCACTTTCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSLTLWD*GHFLPA
Trigger: AGCTGGGAGAAAGTGCCCCAAGTCCCAAAGGGTCAA...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCTTGGAGCAGTCAAATTaGTCCTTGGTGGACACCTCA +
Preference number: 5 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSLEQSN*SLVDTS
Trigger: TGAGGTGTCCACCAAGGACAAATTTGACTGCTCCAA...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGATCTCCTGGCCATTCTaGAGCCATTTGACCTCAGCG +
Preference number: 5 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRISWPF*SHLTSA
Trigger: CGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGAT...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTATGGTCAGGGTACGCTaGGCACCGATGGACTCAAAG +
Preference number: 5 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSMVRVR*APMDSK
Trigger: CTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCAT...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTTCCAGCATGGCCTCGTaGATGATCAGGTGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSSSMAS*MIRWCL
Trigger: GAGACACCACCTGATCATCAACGAGGCCATGCTGGA...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACACTCCATGGTCTTCTaGTCGGCTTTCTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPHSMVF*SAFCTV
Trigger: CACAGTGCAGAAAGCCGACAAGAAGACCATGGAGTG...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCACCCTCCGCACAGGAGACACACTaGTCACACATACATCCAACA +
Preference number: 5 (lower is better)
Translates to: HSRPERPVPRHCFLRPPSAQETH*SHIHPT
Trigger: TGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC...GGAGGGTGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS TCA 90 bp CTTCGAGTCCCTCGGGGTCCGGAAACTGTCTCTCTTTTTCAGCAGTaGGCTGAAGTCCAGAATCCCAGTGTCCTCATGGCTATCACTGAT +
Preference number: 5 (lower is better)
Translates to: LRVPRGPETVSLFQQ*AEVQNPSVLMAITD
Trigger: ATCAGTGATAGCCATGAGGACACTGGGATTCTGGACTTCAGCTCACTGCTGAAAAAGAGAGACAGTTTCCGGACCCCGAGGGACTCGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544791.1
ENST00000545968.6
CDS-3UTR CAA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTACTGACCGTGGCTTCTaGCTAAAAGCTGAGACTGGC +
Preference number: 5 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSTDRGF*LKAETG
Trigger: GCCAGTCTCAGCTTTTAGCAAGAAGCCACGGTCAGT...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCAGTCAAATTTGTCCTaGGTGGACACCTCACAGCGG +
Preference number: 5 (lower is better)
Translates to: LIPHRSTGDTLVTHTSNSQSNLS*VDTSQR
Trigger: CCGCTGTGAGGTGTCCACCAAGGACAAATTTGACTG...ACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCCCATTCTTGAGCCATTaGACCTCAGCGTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPPFLSH*TSASWS
Trigger: TGACCATGACGCTGAGGTCAAATGGCTCAAGAATGG...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGTCTGAGACCTCACATTaGAACACCGCCTGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRSETSH*NTAWSF
Trigger: AAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAGA...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATCTGAGACCTCACATTaGAACACCGCCTGGTCCTTT +
Preference number: 5 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPSETSH*NTAWSF
Trigger: AAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAGA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCGGTACGAAGTCAATCTaGACCTCCATGAAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPGTKSI*TSMKWS
Trigger: GCTCCACTTCATGGAGGTCAAGATTGACTTCGTACC...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTACGAAGTCAATCTaGACCTCCATGAAGTGGAGC +
Preference number: 5 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRGTKSI*TSMKWS
Trigger: GCTCCACTTCATGGAGGTCAAGATTGACTTCGTACC...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGTCACACAGCAGCTTCTaGTCAAACACCCACTCATCG +
Preference number: 5 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRSHSSF*SNTHSS
Trigger: CGATGAGTGGGTGTTTGACAAGAAGCTGCTGTGTGA...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGACTCAAAGATGTACTaGCTGCCGCTCATCTGGATC +
Preference number: 5 (lower is better)
Translates to: PIAAQETHLSHIHPTVGRDSKMY*LPLIWI
Trigger: GATCCAGATGAGCGGCAGCAAGTACATCTTTGAGTC...CCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCACAGGAGACACACTTGTCACACATACATCCAACAGTAGGGAGGGGTTTCCCCTTGGAGCAGTCAAATTaGTCCTTGGTGGACACCTCA +
Preference number: 5 (lower is better)
Translates to: AQETHLSHIHPTVGRGFPLEQSN*SLVDTS
Trigger: TGAGGTGTCCACCAAGGACAAATTTGACTGCTCCAA...GGGGAAACCCCTCCCTACTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GGAAGACATAGCAGGCCAGAAAGGCCTGTCCCCAGACATTGTTTCTTGAGGCCATTGGAGCAGTCAAATTaGTCCTTGGTGGACACCTCA +
Preference number: 5 (lower is better)
Translates to: GRHSRPERPVPRHCFLRPLEQSN*SLVDTS
Trigger: TGAGGTGTCCACCAAGGACAAATTTGACTGCTCCAA...TGGCCTCAAGAAACAATGTCTGGGGACAGGCCTTTCTGGCCTGCTATGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCTCCATGAAGTGGAGCTaGGCTGACAGGTTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSSMKWS*ADRLQA
Trigger: CGCCTGCAACCTGTCAGCCAAGCTCCACTTCATGGA...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCGTCAACACTCCCTGCTaGCTGAACATGCGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSVNTPC*LNMRKR
Trigger: CCGCTTCCGCATGTTCAGCAAGCAGGGAGTGTTGAC...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp GCTGATCCCCCATCGCAGCACAGGAGACACACTTGTCACACATACATCCAACAGTCGTGGACAGTGAGATaGAAGTTGGAGCAGTCAAAT +
Preference number: 5 (lower is better)
Translates to: ADPPSQHRRHTCHTYIQQSWTVR*KLEQSN
Trigger: ATTTGACTGCTCCAACTTCAATCTCACTGTCCACGA...CTGTTGGATGTATGTGTGACAAGTGTGTCTCCTGTGCTGCGATGGGGGATCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS-3UTR CAA 90 bp CTTTTATTGCCCAATAAACATTGGGAAGACATAGCAGGCCAGAAAGGCCTGTCCTCGTGGACAGTGAGATaGAAGTTGGAGCAGTCAAAT +
Preference number: 5 (lower is better)
Translates to: LLLPNKHWEDIAGQKGLSSWTVR*KLEQSN
Trigger: ATTTGACTGCTCCAACTTCAATCTCACTGTCCACGA...GGACAGGCCTTTCTGGCCTGCTATGTCTTCCCAATGTTTATTGGGCAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS TCA 72 bp AGGCGGCTTCAGGAGGCTGGCGCCGGCCACGCGGGCTaGGAAGGTGATGCTGCCACCCACGGTCACCTCGCC +
Preference number: 6 (lower is better)
Translates to: RRLQEAGAGHAG*EGDAATHGHLA
Trigger: GGCGAGGTGACCGTGGGTGGCAGCATCACCTTCTCAGCCCGCGTGGCCGGCGCCAGCCTCCTGAAGCCGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp GTCACTGCCTCCGCGCTGCCAGCGCACCTTCACTCCTaGCCGCTCTGTCTCGGCCTCGAACACGGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: VTASALPAHLHS*PLCLGLEHGRA
Trigger: AGCCCTGCCGTGTTCGAGGCCGAGACAGAGCGGGCAGGAGTGAAGGTGCGCTGGCAGCGCGGAGGCAGTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp CTGCCCGCTCTGTCTCGGCCTCGAACACGGCAGGGCTaGCTGCGGCCACTTCCACTGACCGTGGCTTCTTGC +
Preference number: 6 (lower is better)
Translates to: LPALSRPRTRQG*LRPLPLTVASC
Trigger: GCAAGAAGCCACGGTCAGTGGAAGTGGCCGCAGGCAGCCCTGCCGTGTTCGAGGCCGAGACAGAGCGGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp GAGCTCAGCCAGCGCCTGGCCCCCGCTAGTGCACAGTaGATAGTGCCCCGCGTCCTCCAGCATGGCCTCGTT +
Preference number: 6 (lower is better)
Translates to: ELSQRLAPASAQ*IVPRVLQHGLV
Trigger: AACGAGGCCATGCTGGAGGACGCGGGGCACTATGCACTGTGCACTAGCGGGGGCCAGGCGCTGGCTGAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 90 bp CGCACTGTCAGCGTATGCCGTGTGCCCTCTGTGGCCAGGCCGTACTaGTTGCTGGCGCTGATGTCACTGCCTCCGCGCTGCCAGCGCACC +
Preference number: 6 (lower is better)
Translates to: RTVSVCRVPSVARPY*LLALMSLPPRCQRT
Trigger: GGTGCGCTGGCAGCGCGGAGGCAGTGACATCAGCGCCAGCAACAAGTACGGCCTGGCCACAGAGGGCACACGGCATACGCTGACAGTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp CAGGGCCCACTTCCCGCACTGTCAGCGTATGCCGTGTaGCCTCTGTGGCCAGGCCGTACTTGTTGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: QGPLPALSAYAV*PLWPGRTCCWR
Trigger: GCGCCAGCAACAAGTACGGCCTGGCCACAGAGGGCACACGGCATACGCTGACAGTGCGGGAAGTGGGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 72 bp CATCCGGTTGTACCTGGCCATCCCCAGGAGCCAGCCTaGTCACTGAGGCACTCGCACCTCCAGGCGGCACTC +
Preference number: 6 (lower is better)
Translates to: HPVVPGHPQEPA*SLRHSHLQAAL
Trigger: GAGTGCCGCCTGGAGGTGCGAGTGCCTCAGTGACCAGGCTGGCTCCTGGGGATGGCCAGGTACAACCGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CAA 72 bp TTCTCTGCCCCCTCGACCGTGAAGATGCTGCGGTCCTaGGTGGTCTCCACGCGGACCCGGCCCTCGGTCTCA +
Preference number: 6 (lower is better)
Translates to: FSAPSTVKMLRS*VVSTRTRPSVS
Trigger: TGAGACCGAGGGCCGGGTCCGCGTGGAGACCACCAAGGACCGCAGCATCTTCACGGTCGAGGGGGCAGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 72 bp TCCGTGGTGGTAACAGGGGCTCCAGGCCCTGCCATATaGTGTGCCCGCACTCGGAAAAGCAGCCGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: SVVVTGAPGPAI*CARTRKSSRAP
Trigger: GGGGGCCCGGCTGCTTTTCCGAGTGCGGGCACACAATATGGCAGGGCCTGGAGCCCCTGTTACCACCACGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS TCA 72 bp TGCCCTCTGTGGCCAGGCCGTACTTGTTGCTGGCGCTaGTGTCACTGCCTCCGCGCTGCCAGCGCACCTTCA +
Preference number: 6 (lower is better)
Translates to: CPLWPGRTCCWR*CHCLRAASAPS
Trigger: TGAAGGTGCGCTGGCAGCGCGGAGGCAGTGACATCAGCGCCAGCAACAAGTACGGCCTGGCCACAGAGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp TGGTCGGCAGGGCCCACTTCCCGCACTGTCAGCGTATaGCGTGTGCCCTCTGTGGCCAGGCCGTACTTGTTG +
Preference number: 6 (lower is better)
Translates to: WSAGPTSRTVSV*RVPSVARPYLL
Trigger: CAACAAGTACGGCCTGGCCACAGAGGGCACACGGCATACGCTGACAGTGCGGGAAGTGGGCCCTGCCGACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp GCCCCCGTGGGCAGGTCCTTCACCAGTATCGATGTGTaGTCTGTCAGCCCCTGCAGGGCAGCCACCCACTCT +
Preference number: 6 (lower is better)
Translates to: APVGRSFTSIDV*SVSPCRAATHS
Trigger: AGAGTGGGTGGCTGCCCTGCAGGGGCTGACAGAGCACACATCGATACTGGTGAAGGACCTGCCCACGGGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CCA 72 bp GGTGATGCTGCCACCCACGGTCACCTCGCCATCCTGTaGCCGCATCACGAAGAGGCCAATGGGGTCATCGGG +
Preference number: 6 (lower is better)
Translates to: GDAATHGHLAIL*PHHEEANGVIG
Trigger: CCCGATGACCCCATTGGCCTCTTCGTGATGCGGCCACAGGATGGCGAGGTGACCGTGGGTGGCAGCATCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 72 bp GGCGGCACTCACACCGTGCCTCGCCCTGTAAGTTGGTaGCCCTGCAGACATAGATGCCCCCGTCAAAGGGGC +
Preference number: 6 (lower is better)
Translates to: GGTHTVPRPVSW*PCRHRCPRQRG
Trigger: GCCCCTTTGACGGGGGCATCTATGTCTGCAGGGCCACCAACTTACAGGGCGAGGCACGGTGTGAGTGCCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CAA 72 bp GTATGCCGTGTGCCCTCTGTGGCCAGGCCGTACTTGTaGCTGGCGCTGATGTCACTGCCTCCGCGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: VCRVPSVARPYL*LALMSLPPRCQ
Trigger: CTGGCAGCGCGGAGGCAGTGACATCAGCGCCAGCAACAAGTACGGCCTGGCCACAGAGGGCACACGGCATAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 72 bp AGCGTATGCCGTGTGCCCTCTGTGGCCAGGCCGTACTaGTTGCTGGCGCTGATGTCACTGCCTCCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: SVCRVPSVARPY*LLALMSLPPRC
Trigger: GCAGCGCGGAGGCAGTGACATCAGCGCCAGCAACAAGTACGGCCTGGCCACAGAGGGCACACGGCATACGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 72 bp GGCTCCCACTGTACTGTGCAGGAGTCCTCTCCCACGTaGCTGATCTTGGGGGCCGCAGGTGCGTCTGGCACG +
Preference number: 6 (lower is better)
Translates to: GSHCTVQESSPT*LILGAAGASGT
Trigger: CGTGCCAGACGCACCTGCGGCCCCCAAGATCAGCAACGTGGGAGAGGACTCCTGCACAGTACAGTGGGAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 90 bp ACTGTCAGCGTATGCCGTGTGCCCTCTGTGGCCAGGCCGTACTTGTaGCTGGCGCTGATGTCACTGCCTCCGCGCTGCCAGCGCACCTTC +
Preference number: 6 (lower is better)
Translates to: TVSVCRVPSVARPYL*LALMSLPPRCQRTF
Trigger: GAAGGTGCGCTGGCAGCGCGGAGGCAGTGACATCAGCGCCAGCAACAAGTACGGCCTGGCCACAGAGGGCACACGGCATACGCTGACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 90 bp TCATCTTCCTTCTCTGCCCCCTCGACCGTGAAGATGCTGCGGTCCTaGGTGGTCTCCACGCGGACCCGGCCCTCGGTCTCACACAGCAGC +
Preference number: 6 (lower is better)
Translates to: SSSFSAPSTVKMLRS*VVSTRTRPSVSHSS
Trigger: GCTGCTGTGTGAGACCGAGGGCCGGGTCCGCGTGGAGACCACCAAGGACCGCAGCATCTTCACGGTCGAGGGGGCAGAGAAGGAAGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS TCA 72 bp ACCCACCACGCACTGGTAGGCTGCGTCGTCCGCCAATaGGCACTGGCTGATGGTCAGGGTACGCTTGGCACC +
Preference number: 6 (lower is better)
Translates to: THHALVGCVVRQ*ALADGQGTLGT
Trigger: GGTGCCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGACGACGCAGCCTACCAGTGCGTGGTGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS TCA 72 bp CCCACTGTACTGTGCAGGAGTCCTCTCCCACGTTGCTaGTCTTGGGGGCCGCAGGTGCGTCTGGCACGTCGA +
Preference number: 6 (lower is better)
Translates to: PTVLCRSPLPRC*SWGPQVRLARR
Trigger: TCGACGTGCCAGACGCACCTGCGGCCCCCAAGATCAGCAACGTGGGAGAGGACTCCTGCACAGTACAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp TACTTGTTGCTGGCGCTGATGTCACTGCCTCCGCGCTaGCAGCGCACCTTCACTCCTGCCCGCTCTGTCTCG +
Preference number: 6 (lower is better)
Translates to: YLLLALMSLPPR*QRTFTPARSVS
Trigger: CGAGACAGAGCGGGCAGGAGTGAAGGTGCGCTGGCAGCGCGGAGGCAGTGACATCAGCGCCAGCAACAAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp CCCTCCTCCGATACTTCACACTCAAACTCCACCCGCTaGCCCACCATCACCAGCTGGTCCTCCAAGGGGCGC +
Preference number: 6 (lower is better)
Translates to: PSSDTSHSNSTR*PTITSWSSKGR
Trigger: GCGCCCCTTGGAGGACCAGCTGGTGATGGTGGGGCAGCGGGTGGAGTTTGAGTGTGAAGTATCGGAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp CGTAGACGCGCATCTCGTACACCACGCCCTCGATCATaGGCCGCGCTTCATGACTCAGCTCCCAGGATGGGC +
Preference number: 6 (lower is better)
Translates to: RRRASRTPRPRS*AALHDSAPRMG
Trigger: GCCCATCCTGGGAGCTGAGTCATGAAGCGCGGCGCATGATCGAGGGCGTGGTGTACGAGATGCGCGTCTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544791.1
CDS CCA 72 bp TGTGTGCCCGCACTCGGAAAAGCAGCCGGGCCCCCGTaGGCAGGTCCTTCACCAGTATCGATGTGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: CVPALGKAAGPP*AGPSPVSMCAL
Trigger: CAGAGCACACATCGATACTGGTGAAGGACCTGCCCACGGGGGCCCGGCTGCTTTTCCGAGTGCGGGCACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CCA 72 bp CCCCGACCTTCTTCTGAATGGTCTGGCGCAGGTGCCTaGGCAGCTGAAGCCGTGGCCGTTGCAGGATCTCCT +
Preference number: 6 (lower is better)
Translates to: PRPSSEWSGAGA*AAEAVAVAGSP
Trigger: AGGAGATCCTGCAACGGCCACGGCTTCAGCTGCCCAGGCACCTGCGCCAGACCATTCAGAAGAAGGTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CAA 90 bp GGCTCCCACTGTACTGTGCAGGAGTCCTCTCCCACGTTGCTGATCTaGGGGGCCGCAGGTGCGTCTGGCACGTCGATGACCTTGACTGTG +
Preference number: 6 (lower is better)
Translates to: GSHCTVQESSPTLLI*GAAGASGTSMTLTV
Trigger: CACAGTCAAGGTCATCGACGTGCCAGACGCACCTGCGGCCCCCAAGATCAGCAACGTGGGAGAGGACTCCTGCACAGTACAGTGGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS TCA 72 bp AGACGCCCTCATCTTCCTTCTCTGCCCCCTCGACCGTaGAGATGCTGCGGTCCTTGGTGGTCTCCACGCGGA +
Preference number: 6 (lower is better)
Translates to: RRPHLPSLPPRP*RCCGPWWSPRG
Trigger: TCCGCGTGGAGACCACCAAGGACCGCAGCATCTTCACGGTCGAGGGGGCAGAGAAGGAAGATGAGGGCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 72 bp GATGACCGAGCGGTTCACCAGGGGCTGGGTGAAGCTTaGGGCCTCGGAGAAGTCCAGGGCCTTATAGTTGGG +
Preference number: 6 (lower is better)
Translates to: DDRAVHQGLGEA*GLGEVQGLIVG
Trigger: CCCAACTATAAGGCCCTGGACTTCTCCGAGGCCCCAAGCTTCACCCAGCCCCTGGTGAACCGCTCGGTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CAA 72 bp TGTACTGTGCAGGAGTCCTCTCCCACGTTGCTGATCTaGGGGGCCGCAGGTGCGTCTGGCACGTCGATGACC +
Preference number: 6 (lower is better)
Translates to: CTVQESSPTLLI*GAAGASGTSMT
Trigger: GGTCATCGACGTGCCAGACGCACCTGCGGCCCCCAAGATCAGCAACGTGGGAGAGGACTCCTGCACAGTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 72 bp CGGAAGCGGGCGTCTTCTCCCAGGTCCAGGCCATTCTaGAACCAGGAAATCTTGGGCTTGGGGCTACCCCGG +
Preference number: 6 (lower is better)
Translates to: RKRASSPRSRPF*NQEILGLGLPR
Trigger: CCGGGGTAGCCCCAAGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGACCTGGGAGAAGACGCCCGCTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS TCA 72 bp AAGCTGAGACTGGCTTCTTCCCCGGCTCAGGCATCCTaGGAGACGTCACACCAGGCACGAAGCAGGCACAGG +
Preference number: 6 (lower is better)
Translates to: KLRLASSPAQAS*ETSHQARSRHR
Trigger: CCTGTGCCTGCTTCGTGCCTGGTGTGACGTCTCTCAGGATGCCTGAGCCGGGGAAGAAGCCAGTCTCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS TCA 72 bp CGGGCACAAAGCTGTAGTCAGCCTCGTCGGCAGGTGTaGCGTCGTCAATGGTCAGTTTGTGGACCCGCCCGA +
Preference number: 6 (lower is better)
Translates to: RAQSCSQPRRQV*RRQWSVCGPAR
Trigger: TCGGGCGGGTCCACAAACTGACCATTGACGACGTCACACCTGCCGACGAGGCTGACTACAGCTTTGTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS TCA 72 bp GGAAGCGGGCGTCTTCTCCCAGGTCCAGGCCATTCTTaGACCAGGAAATCTTGGGCTTGGGGCTACCCCGGA +
Preference number: 6 (lower is better)
Translates to: GSGRLLPGPGHS*TRKSWAWGYPG
Trigger: TCCGGGGTAGCCCCAAGCCCAAGATTTCCTGGTTCAAGAATGGCCTGGACCTGGGAGAAGACGCCCGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS GCA 72 bp GAGGTCGAACTTGACCTTGGAGGAGCCAGCAATGACTaGGTAAGATCCCTGGTCGGCAGGGCCCACTTCCCG +
Preference number: 6 (lower is better)
Translates to: EVELDLGGASND*VRSLVGRAHFP
Trigger: CGGGAAGTGGGCCCTGCCGACCAGGGATCTTACGCAGTCATTGCTGGCTCCTCCAAGGTCAAGTTCGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp GTCCTCTCCCACGTTGCTGATCTTGGGGGCCGCAGGTaGGTCTGGCACGTCGATGACCTTGACTGTGAGGTT +
Preference number: 6 (lower is better)
Translates to: VLSHVADLGGRR*VWHVDDLDCEV
Trigger: AACCTCACAGTCAAGGTCATCGACGTGCCAGACGCACCTGCGGCCCCCAAGATCAGCAACGTGGGAGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp AGTTCAGCCGCATCCACCGGTAGCTCTTCTTCTTCTTaGGCTCCAGGATGTAGCCCAGGATGGGCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: SSAASTGSSSSS*APGCSPGWAAR
Trigger: GCGGGCAGCCCATCCTGGGCTACATCCTGGAGCGCAAGAAGAAGAAGAGCTACCGGTGGATGCGGCTGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CAA 90 bp GCTGCGTCGTCCGCCAATGAGCACTGGCTGATGGTCAGGGTACGCTaGGCACCGATGGACTCAAAGATGTACCTGCTGCCGCTCATCTGG +
Preference number: 6 (lower is better)
Translates to: AASSANEHWLMVRVR*APMDSKMYLLPLIW
Trigger: CCAGATGAGCGGCAGCAGGTACATCTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGACGACGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256993.8
CDS TCA 72 bp ACTGGTAGGCTGCGTCGTCCGCCAATGAGCACTGGCTaGTGGTCAGGGTACGCTTGGCACCGATGGACTCAA +
Preference number: 6 (lower is better)
Translates to: TGRLRRPPMSTG*WSGYAWHRWTQ
Trigger: TTGAGTCCATCGGTGCCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGACGACGCAGCCTACCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS TCA 72 bp CATGTTCTCAATGCGCACCGTCACCTGGTAAGTGCCTaGATGCACGCGGCGAGCGGCCCGGATGAACAGGAT +
Preference number: 6 (lower is better)
Translates to: HVLNAHRHLVSA*MHAASGPDEQD
Trigger: ATCCTGTTCATCCGGGCCGCTCGCCGCGTGCATTCAGGCACTTACCAGGTGACGGTGCGCATTGAGAACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS GCA 72 bp CACTGTGACCGTGTAGACGCCCTCATCTTCCTTCTCTaGCCCCTCGACCGTGAAGATGCTGCGGTCCTTGGT +
Preference number: 6 (lower is better)
Translates to: HCDRVDALIFLL*PLDREDAAVLG
Trigger: ACCAAGGACCGCAGCATCTTCACGGTCGAGGGGGCAGAGAAGGAAGATGAGGGCGTCTACACGGTCACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp CGTAGACGCGCATCTCGTACACCACGCCCTCGATCATaGGCCGCGCTTCATGACTCAGCTCCTGAATCAGGT +
Preference number: 6 (lower is better)
Translates to: RRRASRTPRPRS*AALHDSAPESG
Trigger: ACCTGATTCAGGAGCTGAGTCATGAAGCGCGGCGCATGATCGAGGGCGTGGTGTACGAGATGCGCGTCTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS GCA 72 bp GCAGCACCAGCGTGGCCTTGTCCTCCATGTTCTCAATaGGCACCGTCACCTGGTAAGTGCCTGAATGCACGC +
Preference number: 6 (lower is better)
Translates to: AAPAWPCPPCSQ*APSPGKCLNAR
Trigger: GCGTGCATTCAGGCACTTACCAGGTGACGGTGCGCATTGAGAACATGGAGGACAAGGCCACGCTGGTGCTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CCA 72 bp ACTGTGTACCCCCAGAGCTCCGTGTTGCCGACATCCTaGGGTGGCTTCCACTCCAGAGCCACATTAAGACCC +
Preference number: 6 (lower is better)
Translates to: TVYPQSSVLPTS*GGFHSRATLRP
Trigger: GGGTCTTAATGTGGCTCTGGAGTGGAAGCCACCCCAGGATGTCGGCAACACGGAGCTCTGGGGGTACACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CAA 72 bp GGTGCGTCTGGCACGTCGATGACCTTGACTGTGAGGTaGACCTGGTCCTCGCCCACAGGGTTCTTCACTGTG +
Preference number: 6 (lower is better)
Translates to: GASGTSMTLTVR*TWSSPTGFFTV
Trigger: CACAGTGAAGAACCCTGTGGGCGAGGACCAGGTCAACCTCACAGTCAAGGTCATCGACGTGCCAGACGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 90 bp GCTGCGTCGTCCGCCAATGAGCACTGGCTGATGGTCAGGGTACGCTaGGCACCGATGGACTCAAAGATGTACTTGCTGCCGCTCATCTGG +
Preference number: 6 (lower is better)
Translates to: AASSANEHWLMVRVR*APMDSKMYLLPLIW
Trigger: CCAGATGAGCGGCAGCAAGTACATCTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGACGACGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 90 bp TACCTGCTGCCGCTCATCTGGATCTCCTGGCCATTCTTGAGCCATTaGACCTCAGCGTCATGGTCAGCCAGTTCCACGGTCAGCCGGATC +
Preference number: 6 (lower is better)
Translates to: YLLPLIWISWPFLSH*TSASWSASSTVSRI
Trigger: GATCCGGCTGACCGTGGAACTGGCTGACCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAGGTA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256993.8
CDS CAA 90 bp TCAAAGGGGCAGGGCTTTCTAATCTCCAGAGTCAACACTCCCTGCTaGCTGAACATGCGGAAGCGGGCGTCTTCTCCCAGGTCCAGGCCA +
Preference number: 6 (lower is better)
Translates to: SKGQGFLISRVNTPC*LNMRKRASSPRSRP
Trigger: TGGCCTGGACCTGGGAGAAGACGCCCGCTTCCGCATGTTCAGCAAGCAGGGAGTGTTGACTCTGGAGATTAGAAAGCCCTGCCCCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS GCA 72 bp GAACACCGCCTGGTCCTTTGCGCCCACCATCAGGTCTaGGATGCTCTGGTACACCTCCAGCTTCTTTTCCTG +
Preference number: 6 (lower is better)
Translates to: EHRLVLCAHHQV*DALVHLQLLFL
Trigger: CAGGAAAAGAAGCTGGAGGTGTACCAGAGCATCGCAGACCTGATGGTGGGCGCAAAGGACCAGGCGGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp TCAGTTTGTGGACCCGCCCGATGTGGGACACCTTTATaGGGCTGTCGGGCACCAGCTCCTTCCCATTCTTCA +
Preference number: 6 (lower is better)
Translates to: SVCGPARCGTPL*GCRAPAPSHSS
Trigger: TGAAGAATGGGAAGGAGCTGGTGCCCGACAGCCGCATAAAGGTGTCCCACATCGGGCGGGTCCACAAACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 72 bp ACAATGGTGTCTGGTATGCGGCCTGGGCAGTCCAGGTaGATCTTGGGAGGTTCCTGCCTGGGTACGAAGTCA +
Preference number: 6 (lower is better)
Translates to: TMVSGMRPGQSR*ILGGSCLGTKS
Trigger: TGACTTCGTACCCAGGCAGGAACCTCCCAAGATCCACCTGGACTGCCCAGGCCGCATACCAGACACCATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 72 bp TCTGGCACGTCGATGACCTTGACTGTGAGGTTGACCTaGTCCTCGCCCACAGGGTTCTTCACTGTGACCGTG +
Preference number: 6 (lower is better)
Translates to: SGTSMTLTVRLT*SSPTGFFTVTV
Trigger: CACGGTCACAGTGAAGAACCCTGTGGGCGAGGACCAGGTCAACCTCACAGTCAAGGTCATCGACGTGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 72 bp ACATTAAGACCCCAGGCGTCAGTCACCCGGAGATCCTaGGGAGGACTTGGCTTGTCAACAACCTGCAGCACC +
Preference number: 6 (lower is better)
Translates to: TLRPQASVTRRS*GGLGLSTTCST
Trigger: GGTGCTGCAGGTTGTTGACAAGCCAAGTCCTCCCCAGGATCTCCGGGTGACTGACGCCTGGGGTCTTAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CAA 72 bp TCCGCCAATGAGCACTGGCTGATGGTCAGGGTACGCTaGGCACCGATGGACTCAAAGATGTACCTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: SANEHWLMVRVR*APMDSKMYLLP
Trigger: CGGCAGCAGGTACATCTTTGAGTCCATCGGTGCCAAGCGTACCCTGACCATCAGCCAGTGCTCATTGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256993.8
CDS CAA 90 bp TACTTGCTGCCGCTCATCTGGATCTCCTGGCCATTCTTGAGCCATTaGACCTCAGCGTCATGGTCAGCCAGTTCCACGGTCAGCCGGATC +
Preference number: 6 (lower is better)
Translates to: YLLPLIWISWPFLSH*TSASWSASSTVSRI
Trigger: GATCCGGCTGACCGTGGAACTGGCTGACCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAAGTA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp ACGGTGAACCACTCCATGGTCTTCTTGTCGGCTTTCTaGACTGTGTACCCCCAGAGCTCCGTGTTGCCGACA +
Preference number: 6 (lower is better)
Translates to: TVNHSMVFLSAF*TVYPQSSVLPT
Trigger: TGTCGGCAACACGGAGCTCTGGGGGTACACAGTGCAGAAAGCCGACAAGAAGACCATGGAGTGGTTCACCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CCA 72 bp TCCTGGCCATTCTTGAGCCATTTGACCTCAGCGTCATaGTCAGCCAGTTCCACGGTCAGCCGGATCTTGTGG +
Preference number: 6 (lower is better)
Translates to: SWPFLSHLTSAS*SASSTVSRILW
Trigger: CCACAAGATCCGGCTGACCGTGGAACTGGCTGACCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 72 bp GAGGACTTGGCTTGTCAACAACCTGCAGCACCAGCGTaGCCTTGTCCTCCATGTTCTCAATGCGCACCGTCA +
Preference number: 6 (lower is better)
Translates to: EDLACQQPAAPA*PCPPCSQCAPS
Trigger: TGACGGTGCGCATTGAGAACATGGAGGACAAGGCCACGCTGGTGCTGCAGGTTGTTGACAAGCCAAGTCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000545968.6
CDS CAA 72 bp CCGCTCATCTGGATCTCCTGGCCATTCTTGAGCCATTaGACCTCAGCGTCATGGTCAGCCAGTTCCACGGTC +
Preference number: 6 (lower is better)
Translates to: PLIWISWPFLSH*TSASWSASSTV
Trigger: GACCGTGGAACTGGCTGACCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 72 bp GGTACGAAGTCAATCTTGACCTCCATGAAGTGGAGCTaGGCTGACAGGTTGCAGGCGAAGCCCTCGGGCACA +
Preference number: 6 (lower is better)
Translates to: GTKSILTSMKWS*ADRLQAKPSGT
Trigger: TGTGCCCGAGGGCTTCGCCTGCAACCTGTCAGCCAAGCTCCACTTCATGGAGGTCAAGATTGACTTCGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS TCA 72 bp GAAGTCAATCTTGACCTCCATGAAGTGGAGCTTGGCTaGCAGGTTGCAGGCGAAGCCCTCGGGCACAAAGCT +
Preference number: 6 (lower is better)
Translates to: EVNLDLHEVELG*QVAGEALGHKA
Trigger: AGCTTTGTGCCCGAGGGCTTCGCCTGCAACCTGTCAGCCAAGCTCCACTTCATGGAGGTCAAGATTGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 72 bp CACACACCCCGAACATTCTCATCTGAGACCTCACATTaGAACACCGCCTGGTCCTTTGCGCCCACCATCAGG +
Preference number: 6 (lower is better)
Translates to: HTPRTFSSETSH*NTAWSFAPTIR
Trigger: CCTGATGGTGGGCGCAAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAGATGAGAATGTTCGGGGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 90 bp TCAAAGATGTACCTGCTGCCGCTCATCTGGATCTCCTGGCCATTCTaGAGCCATTTGACCTCAGCGTCATGGTCAGCCAGTTCCACGGTC +
Preference number: 6 (lower is better)
Translates to: SKMYLLPLIWISWPF*SHLTSASWSASSTV
Trigger: GACCGTGGAACTGGCTGACCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAGGTACATCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256993.8
CDS CAA 90 bp TTCTTCAGCCACACACCCCGAACATTCTCATCTGAGACCTCACATTaGAACACCGCCTGGTCCTTTGCGCCCACCATCAGGTCTGCGATG +
Preference number: 6 (lower is better)
Translates to: FFSHTPRTFSSETSH*NTAWSFAPTIRSAM
Trigger: CATCGCAGACCTGATGGTGGGCGCAAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAGATGAGAATGTTCGGGGTGTGTGGCTGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS TCA 72 bp ACACACCCCGAACATTCTCATCTGAGACCTCACATTTaGACACCGCCTGGTCCTTTGCGCCCACCATCAGGT +
Preference number: 6 (lower is better)
Translates to: THPEHSHLRPHI*TPPGPLRPPSG
Trigger: ACCTGATGGTGGGCGCAAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAGATGAGAATGTTCGGGGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS TCA 72 bp CCTCGGGGTCCGGAAACTGTCTCTCTTTTTCAGCAGTaGGCTGAAGTCCAGAATCCCAGTGTCCTCATGGCT +
Preference number: 6 (lower is better)
Translates to: PRGPETVSLFQQ*AEVQNPSVLMA
Trigger: AGCCATGAGGACACTGGGATTCTGGACTTCAGCTCACTGCTGAAAAAGAGAGACAGTTTCCGGACCCCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp TCCAGCATGGCCTCGTTGATGATCAGGTGGTGTCTCTaGCCGTCCTTCTTGAACCGGTATTTGAAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: SSMASLMIRWCL*PSFLNRYLKVS
Trigger: GGAGACCTTCAAATACCGGTTCAAGAAGGACGGGCAGAGACACCACCTGATCATCAACGAGGCCATGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS GCA 72 bp GCTTATTTCCAGCTACAACCACAATGGTGTCTGGTATaGGGCCTGGGCAGTCCAGGTGGATCTTGGGAGGTT +
Preference number: 6 (lower is better)
Translates to: AYFQLQPQWCLV*GLGSPGGSWEV
Trigger: AACCTCCCAAGATCCACCTGGACTGCCCAGGCCGCATACCAGACACCATTGTGGTTGTAGCTGGAAATAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 72 bp ACATTCTCATCTGAGACCTCACATTTGAACACCGCCTaGTCCTTTGCGCCCACCATCAGGTCTGCGATGCTC +
Preference number: 6 (lower is better)
Translates to: TFSSETSHLNTA*SFAPTIRSAML
Trigger: GAGCATCGCAGACCTGATGGTGGGCGCAAAGGACCAGGCGGTGTTCAAATGTGAGGTCTCAGATGAGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 72 bp AGGTCTCCGGTGCCCATGGCCTCGTGGACAGTGAGATaGAAGTTGGAGCAGTCAAATTTGTCCTTGGTGGAC +
Preference number: 6 (lower is better)
Translates to: RSPVPMASWTVR*KLEQSNLSLVD
Trigger: GTCCACCAAGGACAAATTTGACTGCTCCAACTTCAATCTCACTGTCCACGAGGCCATGGGCACCGGAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256993.8
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 72 bp TACTTGCTGCCGCTCATCTGGATCTCCTGGCCATTCTaGAGCCATTTGACCTCAGCGTCATGGTCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: YLLPLIWISWPF*SHLTSASWSAS
Trigger: ACTGGCTGACCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CAA 90 bp TCAAAGATGTACTTGCTGCCGCTCATCTGGATCTCCTGGCCATTCTaGAGCCATTTGACCTCAGCGTCATGGTCAGCCAGTTCCACGGTC +
Preference number: 6 (lower is better)
Translates to: SKMYLLPLIWISWPF*SHLTSASWSASSTV
Trigger: GACCGTGGAACTGGCTGACCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAAGTACATCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6
CDS CCA 72 bp TCAAAGATGTACCTGCTGCCGCTCATCTGGATCTCCTaGCCATTCTTGAGCCATTTGACCTCAGCGTCATGG +
Preference number: 6 (lower is better)
Translates to: SKMYLLPLIWIS*PFLSHLTSASW
Trigger: CCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAGGTACATCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256993.8
CDS CCA 72 bp TCAAAGATGTACTTGCTGCCGCTCATCTGGATCTCCTaGCCATTCTTGAGCCATTTGACCTCAGCGTCATGG +
Preference number: 6 (lower is better)
Translates to: SKMYLLPLIWIS*PFLSHLTSASW
Trigger: CCATGACGCTGAGGTCAAATGGCTCAAGAATGGCCAGGAGATCCAGATGAGCGGCAGCAAGTACATCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399249.6
ENST00000544791.1
ENST00000545968.6