RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MXRA8 (Homo sapiens)

Ensembl gene IDs: ENSG00000162576

Ensembl transcript IDs: ENST00000309212.11, ENST00000342753.8, ENST00000445648.5, ENST00000460473.1, ENST00000464351.1, ENST00000473097.5, ENST00000474033.5, ENST00000476718.1, ENST00000477278.3, ENST00000478517.5

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTaGAGTCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: AGIQVSRSLGRTDGA*SPTWWYRWGSSRWQ
Trigger: CTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR CCA 90 bp GGGTGCAGCCCCAGGTGGCCCAAAGCAACACAGAGGAGCAAGGGCTaGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTG +
Preference number: 1 (lower is better)
Translates to: GCSPRWPKATQRSKG*HSSQQVPGENRWCL
Trigger: CAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTTGCTCCTCTGTGTTGCTTTGGGCCACCTGGGGCTGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR TCA 90 bp ATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATGTGGGGTGCTaGGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCCCTCC +
Preference number: 1 (lower is better)
Translates to: IVMVAGPPADANVGC*EWQHRPPQTNFTPS
Trigger: GGAGGGAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTGCATCTGCTGGTGGACCTGCCACCATCACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR-3UTR TCA 90 bp ATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAGGAGTGGGGCAGGGCCACCCGTaGGCAAAGGCCGCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: MVVQVGELSVAGSTPGGVGQGHP*AKAAGV
Trigger: CACCCCTGCGGCCTTTGCTCACGGGTGGCCCTGCCC...CACTCCTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR CCA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGACCTGGGAGAGGGGTGTaGAGGCGGCCTCTGCATACG +
Preference number: 2 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGPGRGV*RRPLHT
Trigger: CGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGG...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR TCA 90 bp AAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGGGGCAGGGCCACCCGTaGGCAAAGGCCGCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: KGWHSSQQVPGENRWCLEGQGHP*AKAAGV
Trigger: CACCCCTGCGGCCTTTGCTCACGGGTGGCCCTGCCC...CTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR GCA 90 bp GGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACGGGTGGGGGCTATGCTaGCACCAAGCCCCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: GRVQGRGVRVRSHREPSDGWGLC*HQAPGR
Trigger: TCTCCCAGGGGCTTGGTGGCAGCATAGCCCCCACCC...GTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR GCA 90 bp TGGGCATCAGTGGGATTTTGGTTGTGCCAGGGGTGGGCAGGGCCACCCGTGAGCCGGAGCATCAGGAGATaGCCCGAGGAGCACAGACAG +
Preference number: 2 (lower is better)
Translates to: WASVGFWLCQGWAGPPVSRSIRR*PEEHRQ
Trigger: CTGTCTGTGCTCCTCGGGGCATCTCCTGATGCTCCG...GCTCACGGGTGGCCCTGCCCACCCCTGGCACAACCAAAATCCCACTGATGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR GCA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGATGTGGAGGCGGCCTCTaGATACGCCCAGGCCAAATT +
Preference number: 2 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGCGGGL*IRPGQI
Trigger: AATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACA...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR TCA 90 bp GGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACGAGCCCAGAAGGGTCTaGGGGCATGATGGGCATCAG +
Preference number: 2 (lower is better)
Translates to: GRVQGRGVRVRSHREPSDEPRRV*GHDGHQ
Trigger: CTGATGCCCATCATGCCCTCAGACCCTTCTGGGCTC...GTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR GCA 90 bp TCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAAGGGGCGGAGCATCAGGAGATaGCCCGAGGAGCACAGACAG +
Preference number: 2 (lower is better)
Translates to: SAYAQAKFQESGTSRWKGRSIRR*PEEHRQ
Trigger: CTGTCTGTGCTCCTCGGGGCATCTCCTGATGCTCCG...CCCCTTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR GCA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGCGGAGCATCAGGAGATaGCCCGAGGAGCACAGACAG +
Preference number: 2 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVRSIRR*PEEHRQ
Trigger: CTGTCTGTGCTCCTCGGGGCATCTCCTGATGCTCCG...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR GCA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGTGTGGAGGCGGCCTCTaGATACGCCCAGGCCAAATT +
Preference number: 2 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVCGGGL*IRPGQI
Trigger: AATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACA...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR CCA 90 bp GAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCCAAAGGCCGCAGGGGTaGGGGCTATGCTGCCACCAA +
Preference number: 2 (lower is better)
Translates to: ESKGGVSGSEVTGSPVTIQRPQG*GLCCHQ
Trigger: TTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTG...GATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR TCA 90 bp GAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCGAGCCCAGAAGGGTCTaGGGGCATGATGGGCATCAG +
Preference number: 2 (lower is better)
Translates to: ESKGGVSGSEVTGSPVTIEPRRV*GHDGHQ
Trigger: CTGATGCCCATCATGCCCTCAGACCCTTCTGGGCTC...GATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR GCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTAGGGTGGGGGCTATGCTaGCACCAAGCCCCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: EVTGSPVTIKVAESKARVGWGLC*HQAPGR
Trigger: TCTCCCAGGGGCTTGGTGGCAGCATAGCCCCCACCC...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR CCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCCGACGAGCAGAGCCCTaGAGGAGTGGGACTCCTGCC +
Preference number: 2 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLRRAEP*RSGTPA
Trigger: GGCAGGAGTCCCACTCCTCCAGGGCTCTGCTCGTCG...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR-3UTR CCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTACAAAGGCCGCAGGGGTaGGGGCTATGCTGCCACCAA +
Preference number: 2 (lower is better)
Translates to: EVTGSPVTIKVAESKARVQRPQG*GLCCHQ
Trigger: TTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTG...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR CCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTAGCCTGGAGTCCCACATaGTGGTACAGGTGGGGGAGC +
Preference number: 2 (lower is better)
Translates to: EVTGSPVTIKVAESKARVAWSPT*WYRWGS
Trigger: GCTCCCCCACCTGTACCACCATGTGGGACTCCAGGC...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR-3UTR TCA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATGGGCAGGGCCACCCGTaGGCAAAGGCCGCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: KSDGDFIVMVAGPPADANGQGHP*AKAAGV
Trigger: CACCCCTGCGGCCTTTGCTCACGGGTGGCCCTGCCC...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR GCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTAAGAAAGGGCAAGGGGTaGAGCCCCAGGTGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: EVTGSPVTIKVAESKARVRKGKG*SPRWPK
Trigger: TTTGGGCCACCTGGGGCTGCACCCCTTGCCCTTTCT...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR-3UTR CCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTAACATGGTGGTACAGGTaGGGGAGCTCTCGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: EVTGSPVTIKVAESKARVTWWYR*GSSRWQ
Trigger: CTGCCACCGAGAGCTCCCCCACCTGTACCACCATGT...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR-3UTR CCA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGAACAGATGGTGCCTaGAGTCCCACATGGTGGTAC +
Preference number: 2 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPRTDGA*SPTWWY
Trigger: GTACCACCATGTGGGACTCCAGGCACCATCTGTTCT...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR-3UTR CCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTACCTGGGGAGAACAGATaGTGCCTGGAGTCCCACATG +
Preference number: 2 (lower is better)
Translates to: EVTGSPVTIKVAESKARVPGENR*CLESHM
Trigger: CATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGG...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR-3UTR CCA 90 bp GTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAAAAGTCAGCAGGTCCCTaGGGAGAACAGATGGTGCCT +
Preference number: 2 (lower is better)
Translates to: VQGRGVRVRSHREPSDYQKSAGP*GEQMVP
Trigger: AGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTT...TTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR-3UTR TCA 90 bp GTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAAAAGGGTCTGAGGGCATaGTGGGCATCAGTGGGATTT +
Preference number: 2 (lower is better)
Translates to: VQGRGVRVRSHREPSDYQKGLRA*WASVGF
Trigger: AAATCCCACTGATGCCCATCATGCCCTCAGACCCTT...TTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR CCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTAAAGTCAGCAGGTCCCTaGGGAGAACAGATGGTGCCT +
Preference number: 2 (lower is better)
Translates to: EVTGSPVTIKVAESKARVKSAGP*GEQMVP
Trigger: AGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTT...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR-3UTR CCA 90 bp AAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAAGGTGCATGATGGGCATCAGTaGGATTTTGGTTGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: KGGVSGSEVTGSPVTIKVHDGHQ*DFGCAR
Trigger: CCTGGCACAACCAAAATCCCACTGATGCCCATCATG...CACCTTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR-3UTR CCA 90 bp CTAAAAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCCCTGGGGAGAACAGATaGTGCCTGGAGTCCCACATG +
Preference number: 2 (lower is better)
Translates to: LKIRWGLYCDGGRSTSRCPGENR*CLESHM
Trigger: CATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGG...GCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342753.8
3UTR-3UTR TCA 90 bp CTAAAAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAGGGTCTGAGGGCATaGTGGGCATCAGTGGGATTT +
Preference number: 2 (lower is better)
Translates to: LKIRWGLYCDGGRSTSRCKGLRA*WASVGF
Trigger: AAATCCCACTGATGCCCATCATGCCCTCAGACCCTT...GCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342753.8
3UTR-3UTR CCA 90 bp CTAAAAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAGAACAGATGGTGCCTaGAGTCCCACATGGTGGTAC +
Preference number: 2 (lower is better)
Translates to: LKIRWGLYCDGGRSTSRCRTDGA*SPTWWY
Trigger: GTACCACCATGTGGGACTCCAGGCACCATCTGTTCT...GCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342753.8
3UTR-3UTR CCA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATCATGATGGGCATCAGTaGGATTTTGGTTGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: KSDGDFIVMVAGPPADANHDGHQ*DFGCAR
Trigger: CCTGGCACAACCAAAATCCCACTGATGCCCATCATG...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR CCA 72 bp GGGCTATGCTGCCACCAAGCCCCTGGGAGAGGGGTGTaGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCC +
Preference number: 3 (lower is better)
Translates to: GLCCHQAPGRGV*RRPLHTPRPNS
Trigger: GGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGTGGCAGCATAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR GCA 72 bp ACCAAGCCCCTGGGAGAGGGGTGTGGAGGCGGCCTCTaGATACGCCCAGGCCAAATTCCAGGAAAGCGGGAC +
Preference number: 3 (lower is better)
Translates to: TKPLGEGCGGGL*IRPGQIPGKRD
Trigger: GTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR TCA 72 bp CCCCCAGCGGGCAGAGCCCAGAAGGGTCTGAGGGCATaGTGGGCATCAGTGGGATTTTGGTTGTGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: PPAGRAQKGLRA*WASVGFWLCQG
Trigger: CCCCTGGCACAACCAAAATCCCACTGATGCCCATCATGCCCTCAGACCCTTCTGGGCTCTGCCCGCTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
3UTR CCA 72 bp CTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTaGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCA +
Preference number: 3 (lower is better)
Translates to: LGRTDGAWSPTW*YRWGSSRWQAA
Trigger: TGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR CCA 72 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATaGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: SLGRTDGAWSPT*WYRWGSSRWQA
Trigger: TGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR CCA 72 bp TGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATaGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: WHSSQQVPGENR*CLESHMVVQVG
Trigger: CCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
3UTR-3UTR CAA 90 bp GTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAATCAGTGGGATTTTGGTaGTGCCAGGGGTGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: VQGRGVRVRSHREPSDYQSVGFW*CQGWAG
Trigger: CCCTGCCCACCCCTGGCACAACCAAAATCCCACTGA...TTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp ACCAAGCCCCTGGGAGAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAACGCCAGTGTGGGGTCTaGGCCTGGGGCGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: TKPLGEGCGGGLCIRPGQRQCGV*AWGAAV
Trigger: CACAGCGGCGCCCCAGGCCCAGACCCCACACTGGCG...TTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp GGGCCACCCGTGAGCAAAGGCCGCAGGGGTGGGGGCTATGCTGCCACCAAGCCCTGGGGGAGCTCTCGGTaGCAGGCAGCACCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GPPVSKGRRGGGYAATKPWGSSR*QAAPQE
Trigger: CTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCA...GGGCTTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTGCTCACGGGTGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR TCA 90 bp GGGCCACCCGTGAGCAAAGGCCGCAGGGGTGGGGGCTATGCTGCCACCAAGCCCCAGTGCACCACCTGTTaGGCCTCCTCCACGTGCCGG +
Preference number: 4 (lower is better)
Translates to: GPPVSKGRRGGGYAATKPQCTTC*ASSTCR
Trigger: CCGGCACGTGGAGGAGGCTCAACAGGTGGTGCACTG...GGGCTTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTGCTCACGGGTGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp ACCAAGCCCCTGGGAGAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAACGGACACCACGGAGCTaGCAGCAGCGGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: TKPLGEGCGGGLCIRPGQRTPRS*QQRRVP
Trigger: CGGTACCCGCCGCTGCTGGCAGCTCCGTGGTGTCCG...TTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000477278.3
CDS-3UTR CCA 90 bp ATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAGGAGTGCCGCGCAGGTCCCAGTaGAGCACGCGCTGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: MVVQVGELSVAGSTPGGVPRRSQ*STRWRS
Trigger: CGACCGCCAGCGCGTGCTCCACTGGGACCTGCGCGG...CACTCCTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp ATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAGGAGTGCGCCAGTGTGGGGTCTaGGCCTGGGGCGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: MVVQVGELSVAGSTPGGVRQCGV*AWGAAV
Trigger: CACAGCGGCGCCCCAGGCCCAGACCCCACACTGGCG...CACTCCTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp ATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAGGAGTGCGGACACCACGGAGCTaGCAGCAGCGGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: MVVQVGELSVAGSTPGGVRTPRS*QQRRVP
Trigger: CGGTACCCGCCGCTGCTGGCAGCTCCGTGGTGTCCG...CACTCCTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGACGGACACCACGGAGCTaGCAGCAGCGGCGGGTACCG +
Preference number: 4 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGRTPRS*QQRRVP
Trigger: CGGTACCCGCCGCTGCTGGCAGCTCCGTGGTGTCCG...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCCTGGGGCGCCGCTGTaGCTGGAGCCGTTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: VEAASAYAQAKFQESGTSPGAPL*LEPLPG
Trigger: TCCGGGCAACGGCTCCAGCCACAGCGGCGCCCCAGG...GCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp GGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCCCTGGGGCGCCGCTGTaGCTGGAGCCGTTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: GVEAASAYAQAKFQESGTPGAPL*LEPLPG
Trigger: TCCGGGCAACGGCTCCAGCCACAGCGGCGCCCCAGG...GGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp ATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAGGAGTGTGTGGGGTCTGGGCCTaGGGCGCCGCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: MVVQVGELSVAGSTPGGVCGVWA*GAAVAG
Trigger: TCCAGCCACAGCGGCGCCCCAGGCCCAGACCCCACA...CACTCCTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GGGCCACCCGTGAGCAAAGGCCGCAGGGGTGGGGGCTATGCTGCCACCAAGCCCAGCTGCTGGAAGAAGTaGGCTCGGCTCTCGGGGACG +
Preference number: 4 (lower is better)
Translates to: GPPVSKGRRGGGYAATKPSCWKK*ARLSGT
Trigger: CGTCCCCGAGAGCCGAGCCCACTTCTTCCAGCAGCT...GGGCTTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTGCTCACGGGTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp GGGCCACCCGTGAGCAAAGGCCGCAGGGGTGGGGGCTATGCTGCCACCAAGCCCTTGCTGACCACCTCCTaGGTGCCAGGCTTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GPPVSKGRRGGGYAATKPLLTTS*VPGLLG
Trigger: GCCCAGCAAGCCTGGCACCCAGGAGGTGGTCAGCAA...GGGCTTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTGCTCACGGGTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR GCA 90 bp TGGGCATCAGTGGGATTTTGGTTGTGCCAGGGGTGGGCAGGGCCACCCGTGAGCACGCGCTGGCGGTCGTaGAGCCGGTCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: WASVGFWLCQGWAGPPVSTRWRS*SRSWVH
Trigger: GTGGACCCAGGACCGGCTGCACGACCGCCAGCGCGT...GCTCACGGGTGGCCCTGCCCACCCCTGGCACAACCAAAATCCCACTGATGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000477278.3
CDS-3UTR GCA 90 bp ACCAAGCCCCTGGGAGAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAAGCCAGTGGCGGGGCTaGCAGGAGTGGTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: TKPLGEGCGGGLCIRPGQSQWRG*QEWSWD
Trigger: GTCCCAAGACCACTCCTGGCAGCCCCGCCACTGGCT...TTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CCA 90 bp ACCAAGCCCCTGGGAGAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAAAGCAGGATTCGGGATaGCAGCGCCATGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: TKPLGEGCGGGLCIRPGQKQDSG*QRHGPR
Trigger: GCGGGGGCCATGGCGCTGCCATCCCGAATCCTGCTT...TTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000342753.8
CDS-3UTR CCA 90 bp GGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACACCATGCGCGGGCTCTaGCAGCGCAGCACCGCCCGG +
Preference number: 4 (lower is better)
Translates to: GRVQGRGVRVRSHREPSDTMRGL*QRSTAR
Trigger: CCGGGCGGTGCTGCGCTGCCAGAGCCCGCGCATGGT...GTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACCATGCGCGGGCTCTaGCAGCGCAGCACCGCCCGG +
Preference number: 4 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVTMRGL*QRSTAR
Trigger: CCGGGCGGTGCTGCGCTGCCAGAGCCCGCGCATGGT...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGATCGTGCAGCCGGTCCTaGGTCCACACCATGCGCGGG +
Preference number: 4 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGSCSRS*VHTMRG
Trigger: CCCGCGCATGGTGTGGACCCAGGACCGGCTGCACGA...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGCCGCGCAGGTCCCAGTaGAGCACGCGCTGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGPRRSQ*STRWRS
Trigger: CGACCGCCAGCGCGTGCTCCACTGGGACCTGCGCGG...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAAGGGCGCCGCTGTGGCTaGAGCCGTTGCCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GLCIRPGQIPGKRDQPLEGRRCG*SRCPES
Trigger: GCTCTCCGGGCAACGGCTCCAGCCACAGCGGCGCCC...TTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp TGGGCATCAGTGGGATTTTGGTTGTGCCAGGGGTGGGCAGGGCCACCCGTGAGCTGTGGGGTCTGGGCCTaGGGCGCCGCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WASVGFWLCQGWAGPPVSCGVWA*GAAVAG
Trigger: TCCAGCCACAGCGGCGCCCCAGGCCCAGACCCCACA...GCTCACGGGTGGCCCTGCCCACCCCTGGCACAACCAAAATCCCACTGATGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGCGCCAGTGTGGGGTCTaGGCCTGGGGCGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGRQCGV*AWGAAV
Trigger: CACAGCGGCGCCCCAGGCCCAGACCCCACACTGGCG...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp AGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGCCTGGGTCCACACCATaGGCGGGCTCTGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RGVEAASAYAQAKFQESGPGSTP*AGSGSA
Trigger: TGCGCTGCCAGAGCCCGCGCATGGTGTGGACCCAGG...CCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000477278.3
CDS-3UTR GCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGACGCGCTGGCGGTCGTaGAGCCGGTCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGTRWRS*SRSWVH
Trigger: GTGGACCCAGGACCGGCTGCACGACCGCCAGCGCGT...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp GTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGGTCGGTCCACACGTaGCCGCGGTTCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VEAASAYAQAKFQESGTSRSVHT*PRFTQV
Trigger: GACCTGCGTGAACCGCGGGCACGTGTGGACCGACCG...GCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAGGGTGGGGGCTATGCTaGCACCAAGCCCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGGWGLC*HQAPGR
Trigger: TCTCCCAGGGGCTTGGTGGCAGCATAGCCCCCACCC...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp TCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAAGGGGCAGTGGAGCACGCGCTaGCGGTCGTGCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SAYAQAKFQESGTSRWKGQWSTR*RSCSRS
Trigger: GGACCGGCTGCACGACCGCCAGCGCGTGCTCCACTG...CCCCTTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000477278.3
CDS-3UTR CCA 90 bp GGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAATGTGGGGTCTGGGCCTaGGGCGCCGCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GLCIRPGQIPGKRDQPLECGVWA*GAAVAG
Trigger: TCCAGCCACAGCGGCGCCCCAGGCCCAGACCCCACA...TTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGTGTGGGGTCTGGGCCTaGGGCGCCGCTGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVCGVWA*GAAVAG
Trigger: TCCAGCCACAGCGGCGCCCCAGGCCCAGACCCCACA...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp ACCAAGCCCCTGGGAGAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAACAAAGGCCGCAGGGGTaGGGGCTATGCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: TKPLGEGCGGGLCIRPGQQRPQG*GLCCHQ
Trigger: TTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTG...TTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGACGACGAGCAGAGCCCTaGAGGAGTGGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGRRAEP*RSGTPA
Trigger: GGCAGGAGTCCCACTCCTCCAGGGCTCTGCTCGTCG...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGCGGGGCTGCCAGGAGTaGTCTTGGGACGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: EGCGGGLCIRPGQIPGKRRGCQE*SWDARD
Trigger: GTCCCTGGCGTCCCAAGACCACTCCTGGCAGCCCCG...CCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR TCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTGGGCAGGGCCACCCGTaGGCAAAGGCCGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSGQGHP*AKAAGV
Trigger: CACCCCTGCGGCCTTTGCTCACGGGTGGCCCTGCCC...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR TCA 90 bp GGGCCACCCGTGAGCAAAGGCCGCAGGGGTGGGGGCTATGCTGCCACCAAGCCCTCACAGGGAGCCCAGTaGCTATCAAGGTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GPPVSKGRRGGGYAATKPSQGAQ*LSRWLR
Trigger: TCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGA...GGGCTTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTGCTCACGGGTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp GGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCGGTGGCAGGAGTAGGTaGCCTCGTCGGCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: GVEAASAYAQAKFQESGTGGRSR*PRRRPP
Trigger: TGGAGGTCGCCGACGAGGGCACCTACTCCTGCCACC...GGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp GCAAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGGGCCTCCCCCATCGTTaGTGGCCTGCTGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ARAGIQVSRSLGRTDGAWGLPHR*WPAGEG
Trigger: CCCCTCCCCAGCAGGCCAGCAACGATGGGGGAGGCC...CCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000342753.8
CDS-3UTR GCA 90 bp GCAAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGCGCCGCCGCCGCACCTaGCACGCACATCGGAAGCGT +
Preference number: 4 (lower is better)
Translates to: ARAGIQVSRSLGRTDGAWRRRRT*HAHRKR
Trigger: ACGCTTCCGATGTGCGTGGCAGGTGCGGCGGCGGCG...CCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CCA 90 bp GGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAATCGTGCAGCCGGTCCTaGGTCCACACCATGCGCGGG +
Preference number: 4 (lower is better)
Translates to: GLCIRPGQIPGKRDQPLESCSRS*VHTMRG
Trigger: CCCGCGCATGGTGTGGACCCAGGACCGGCTGCACGA...TTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000477278.3
CDS-3UTR CCA 90 bp GAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCCGCCAGTGTGGGGTCTaGGCCTGGGGCGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: ESKGGVSGSEVTGSPVTIRQCGV*AWGAAV
Trigger: CACAGCGGCGCCCCAGGCCCAGACCCCACACTGGCG...GATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCCGACGAGCAGAGCCCTaGAGGAGTGGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GVEAASAYAQAKFQESGTRRAEP*RSGTPA
Trigger: GGCAGGAGTCCCACTCCTCCAGGGCTCTGCTCGTCG...GGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGTGGGGGAGCTCTCGGTaGCAGGCAGCACCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGWGSSR*QAAPQE
Trigger: CTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCA...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp ATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAGGAGTGGAGCCCAGAAGGGTCTaGGGGCATGATGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: MVVQVGELSVAGSTPGGVEPRRV*GHDGHQ
Trigger: CTGATGCCCATCATGCCCTCAGACCCTTCTGGGCTC...CACTCCTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp ATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAGGAGTGCGGAGCATCAGGAGATaGCCCGAGGAGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: MVVQVGELSVAGSTPGGVRSIRR*PEEHRQ
Trigger: CTGTCTGTGCTCCTCGGGGCATCTCCTGATGCTCCG...CACTCCTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp GGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAAGGGTGGGGGCTATGCTaGCACCAAGCCCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GLCIRPGQIPGKRDQPLEGWGLC*HQAPGR
Trigger: TCTCCCAGGGGCTTGGTGGCAGCATAGCCCCCACCC...TTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGCCATCGTTGCTGGCCTaGTGGGGAGGGGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGPSLLA*WGGAVW
Trigger: CCACACTGCCCCTCCCCAGCAGGCCAGCAACGATGG...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000342753.8
CDS-3UTR GCA 90 bp ACCAAGCCCCTGGGAGAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAATCCTCCACCGCTGAGTaGAGGAGAACAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: TKPLGEGCGGGLCIRPGQSSTAE*RRTAEL
Trigger: GAGCTCTGCTGTTCTCCTGCACTCAGCGGTGGAGGA...TTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342753.8
CDS-3UTR CCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGAAGCAGGATTCGGGATaGCAGCGCCATGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGKQDSG*QRHGPR
Trigger: GCGGGGGCCATGGCGCTGCCATCCCGAATCCTGCTT...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
CDS-3UTR CCA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGGCGCCGCTGTGGCTaGAGCCGTTGCCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGGRRCG*SRCPES
Trigger: GCTCTCCGGGCAACGGCTCCAGCCACAGCGGCGCCC...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAACCTGGGGCGCCGCTGTaGCTGGAGCCGTTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: VQGRGVRVRSHREPSDYQPGAPL*LEPLPG
Trigger: TCCGGGCAACGGCTCCAGCCACAGCGGCGCCCCAGG...TTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp ATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAGGAGTGACATTGATGACGTTGTaGCCGCGCGCCAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: MVVQVGELSVAGSTPGGVTLMTL*PRASVG
Trigger: CCCCACACTGGCGCGCGGCCACAACGTCATCAATGT...CACTCCTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGAGCTGCTGGAAGAAGTaGGCTCGGCTCTCGGGGACG +
Preference number: 4 (lower is better)
Translates to: EGCGGGLCIRPGQIPGKRSCWKK*ARLSGT
Trigger: CGTCCCCGAGAGCCGAGCCCACTTCTTCCAGCAGCT...CCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGCGACGAGCAGAGCCCTaGAGGAGTGGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVRRAEP*RSGTPA
Trigger: GGCAGGAGTCCCACTCCTCCAGGGCTCTGCTCGTCG...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCGCCTGGAGTCCCACATaGTGGTACAGGTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VEAASAYAQAKFQESGTSAWSPT*WYRWGS
Trigger: GCTCCCCCACCTGTACCACCATGTGGGACTCCAGGC...GCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp GAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCTCCAGGCGCAGCCAGTaGCGGGGCTGCCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ESKGGVSGSEVTGSPVTISRRSQ*RGCQEW
Trigger: CCACTCCTGGCAGCCCCGCCACTGGCTGCGCCTGGA...GATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CCA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCGCCGGGTGCCAGCCATaGCCCTCTTGGACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPAGCQP*PSWTPA
Trigger: GGCTGGGGTCCAAGAGGGCCATGGCTGGCACCCGGC...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CCA 90 bp ATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAGGAGTGAGGCTTGCTGGGCACTaGGGACTCAGCACTAAGCCG +
Preference number: 4 (lower is better)
Translates to: MVVQVGELSVAGSTPGGVRLAGH*GLSTKP
Trigger: CGGCTTAGTGCTGAGTCCCCAGTGCCCAGCAAGCCT...CACTCCTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR TCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTAGGGCAGGGCCACCCGTaGGCAAAGGCCGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EVTGSPVTIKVAESKARVGQGHP*AKAAGV
Trigger: CACCCCTGCGGCCTTTGCTCACGGGTGGCCCTGCCC...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR TCA 90 bp GAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGAGCCCAGAAGGGTCTaGGGGCATGATGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: EGCGGGLCIRPGQIPGKREPRRV*GHDGHQ
Trigger: CTGATGCCCATCATGCCCTCAGACCCTTCTGGGCTC...CCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR TCA 90 bp AGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGGAGCCCAGAAGGGTCTaGGGGCATGATGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: RGVEAASAYAQAKFQESGEPRRV*GHDGHQ
Trigger: CTGATGCCCATCATGCCCTCAGACCCTTCTGGGCTC...CCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR TCA 90 bp GTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAACCTGGGGAGGGGTGGTaGCCGCACCCTTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: VQGRGVRVRSHREPSDYQPGEGW*PHPWRD
Trigger: GTCCCTCCAAGGGTGCGGTCACCACCCCTCCCCAGG...TTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000342753.8
CDS-3UTR TCA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGATTCAGAAGCGTTTGCTaGCCACCTCCTGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGFRSVC*PPPGCQ
Trigger: CTGGCACCCAGGAGGTGGTCAGCAAACGCTTCTGAA...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR GCA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAAGTGATGGTGCAGGTTaGAGGTGTACAGCCCCGCGT +
Preference number: 4 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGSDGAG*RCTAPR
Trigger: ACGCGGGGCTGTACACCTGCAACCTGCACCATCACT...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTCGGTCGGTCCACACGTaGCCGCGGTTCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSRSVHT*PRFTQV
Trigger: GACCTGCGTGAACCGCGGGCACGTGTGGACCGACCG...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCCGGTCGGTCCACACGTaGCCGCGGTTCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPRSVHT*PRFTQV
Trigger: GACCTGCGTGAACCGCGGGCACGTGTGGACCGACCG...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp GCAAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGGGTGGCAGGAGTAGGTaGCCTCGTCGGCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: ARAGIQVSRSLGRTDGAWGGRSR*PRRRPP
Trigger: TGGAGGTCGCCGACGAGGGCACCTACTCCTGCCACC...CCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp GGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAAGCATCTGGTCCCCTaGAGCCACAGCGAACTCCGC +
Preference number: 4 (lower is better)
Translates to: GVEAASAYAQAKFQESGTKHLVP*SHSELR
Trigger: GCGGAGTTCGCTGTGGCTGCAGGGGACCAGATGCTT...GGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp ACCAAGCCCCTGGGAGAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAACAGGGCCTCCCTATTTaGAGTTCTCCTTCCGGAACC +
Preference number: 4 (lower is better)
Translates to: TKPLGEGCGGGLCIRPGQQGLPI*SSPSGT
Trigger: GGTTCCGGAAGGAGAACTGCAAATAGGGAGGCCCTG...TTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTTCGTGCAGCCGGTCCTaGGTCCACACCATGCGCGGG +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSSCSRS*VHTMRG
Trigger: CCCGCGCATGGTGTGGACCCAGGACCGGCTGCACGA...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTCAGTGGAGCACGCGCTaGCGGTCGTGCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGQWSTR*RSCSRS
Trigger: GGACCGGCTGCACGACCGCCAGCGCGTGCTCCACTG...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTAGGGCGCCGCTGTGGCTaGAGCCGTTGCCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: EVTGSPVTIKVAESKARVGRRCG*SRCPES
Trigger: GCTCTCCGGGCAACGGCTCCAGCCACAGCGGCGCCC...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTACCTGGGGCGCCGCTGTaGCTGGAGCCGTTGCCCGGA +
Preference number: 4 (lower is better)
Translates to: EVTGSPVTIKVAESKARVPGAPL*LEPLPG
Trigger: TCCGGGCAACGGCTCCAGCCACAGCGGCGCCCCAGG...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGACATTGATGACGTTGTaGCCGCGCGCCAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: EGCGGGLCIRPGQIPGKRTLMTL*PRASVG
Trigger: CCCCACACTGGCGCGCGGCCACAACGTCATCAATGT...CCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp GCAAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGCGACGAGCAGAGCCCTaGAGGAGTGGGACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ARAGIQVSRSLGRTDGAWRRAEP*RSGTPA
Trigger: GGCAGGAGTCCCACTCCTCCAGGGCTCTGCTCGTCG...CCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGACATGGTGGTACAGGTaGGGGAGCTCTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EGCGGGLCIRPGQIPGKRTWWYR*GSSRWQ
Trigger: CTGCCACCGAGAGCTCCCCCACCTGTACCACCATGT...CCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGGGGTGCAGCCCCAGGTaGCCCAAAGCAACACAGAGG +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGGCSPR*PKATQR
Trigger: CCTCTGTGTTGCTTTGGGCCACCTGGGGCTGCACCC...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
63% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTCTCACCGGTCAGGCCTaGGGAGGGGTGGTGACCGCA +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSLTGQA*GGVVTA
Trigger: TGCGGTCACCACCCCTCCCCAGGCCTGACCGGTGAG...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342753.8
CDS-3UTR CCA 90 bp AGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGGAACAGCAGAGCCTGTaGCCGCACAGCGGATCATCG +
Preference number: 4 (lower is better)
Translates to: RGVEAASAYAQAKFQESGEQQSL*PHSGSS
Trigger: CGATGATCCGCTGTGCGGCCACAGGCTCTGCTGTTC...CCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR TCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTCAGTGCACCACCTGTTaGGCCTCCTCCACGTGCCGG +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSQCTTC*ASSTCR
Trigger: CCGGCACGTGGAGGAGGCTCAACAGGTGGTGCACTG...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCCAGTGCACCACCTGTTaGGCCTCCTCCACGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPQCTTC*ASSTCR
Trigger: CCGGCACGTGGAGGAGGCTCAACAGGTGGTGCACTG...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp ACCAAGCCCCTGGGAGAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAAAGGGTCTGAGGGCATaGTGGGCATCAGTGGGATTT +
Preference number: 4 (lower is better)
Translates to: TKPLGEGCGGGLCIRPGQKGLRA*WASVGF
Trigger: AAATCCCACTGATGCCCATCATGCCCTCAGACCCTT...TTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp TGGGCATCAGTGGGATTTTGGTTGTGCCAGGGGTGGGCAGGGCCACCCGTGAGCACCGAGGACCCTGAGTaGAGGAGAACAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: WASVGFWLCQGWAGPPVSTEDPE*RRTAEL
Trigger: GAGCTCTGCTGTTCTCCTGCACTCAGGGTCCTCGGT...GCTCACGGGTGGCCCTGCCCACCCCTGGCACAACCAAAATCCCACTGATGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309212.11
CDS-3UTR GCA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTCCTGGGTCCACACCATaGGCGGGCTCTGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGPGSTP*AGSGSA
Trigger: TGCGCTGCCAGAGCCCGCGCATGGTGTGGACCCAGG...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTAACGCGCTGGCGGTCGTaGAGCCGGTCCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: EVTGSPVTIKVAESKARVTRWRS*SRSWVH
Trigger: GTGGACCCAGGACCGGCTGCACGACCGCCAGCGCGT...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTGCCTCGTACACGCGCTaGTCGCCCGCCGAGTACAAG +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSASYTR*SPAEYK
Trigger: CTTGTACTCGGCGGGCGAGCAGCGCGTGTACGAGGC...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCGCCTCGTACACGCGCTaGTCGCCCGCCGAGTACAAG +
Preference number: 4 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPASYTR*SPAEYK
Trigger: CTTGTACTCGGCGGGCGAGCAGCGCGTGTACGAGGC...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp GGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGTGATGGTGCAGGTTaGAGGTGTACAGCCCCGCGT +
Preference number: 4 (lower is better)
Translates to: GVEAASAYAQAKFQESGTSDGAG*RCTAPR
Trigger: ACGCGGGGCTGTACACCTGCAACCTGCACCATCACT...GGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp GTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAACGGTCGGTCCACACGTaGCCGCGGTTCACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VQGRGVRVRSHREPSDYQRSVHT*PRFTQV
Trigger: GACCTGCGTGAACCGCGGGCACGTGTGGACCGACCG...TTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp AAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGGGGTGGGGGCTATGCTaGCACCAAGCCCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KGWHSSQQVPGENRWCLEGWGLC*HQAPGR
Trigger: TCTCCCAGGGGCTTGGTGGCAGCATAGCCCCCACCC...CTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp ACCAAGCCCCTGGGAGAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAACCCCAACTTCAAGGCTaGCAAGTTCTGATGGGAGTG +
Preference number: 4 (lower is better)
Translates to: TKPLGEGCGGGLCIRPGQPQLQG*QVLMGV
Trigger: CACTCCCATCAGAACTTGGCAGCCTTGAAGTTGGGG...TTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp GGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACAGAAAGGGCAAGGGGTaGAGCCCCAGGTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: GRVQGRGVRVRSHREPSDRKGKG*SPRWPK
Trigger: TTTGGGCCACCTGGGGCTGCACCCCTTGCCCTTTCT...GTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGAGAAAGGGCAAGGGGTaGAGCCCCAGGTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGRKGKG*SPRWPK
Trigger: TTTGGGCCACCTGGGGCTGCACCCCTTGCCCTTTCT...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTAAGCAGGATTCGGGATaGCAGCGCCATGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSKQDSG*QRHGPR
Trigger: GCGGGGGCCATGGCGCTGCCATCCCGAATCCTGCTT...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
CDS-3UTR CCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCCAGTGGAGCACGCGCTaGCGGTCGTGCAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLQWSTR*RSCSRS
Trigger: GGACCGGCTGCACGACCGCCAGCGCGTGCTCCACTG...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCCCTGGGAGAGGGGTGTaGAGGCGGCCTCTGCATACG +
Preference number: 4 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPPGRGV*RRPLHT
Trigger: CGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGG...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp AAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGCCTGGGAGAGGGGTGTaGAGGCGGCCTCTGCATACG +
Preference number: 4 (lower is better)
Translates to: KGWHSSQQVPGENRWCLEPGRGV*RRPLHT
Trigger: CGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGG...CTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTTGGGGGAGCTCTCGGTaGCAGGCAGCACCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGWGSSR*QAAPQE
Trigger: CTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCA...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp ACCAAGCCCCTGGGAGAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAAGAACAGATGGTGCCTaGAGTCCCACATGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: TKPLGEGCGGGLCIRPGQRTDGA*SPTWWY
Trigger: GTACCACCATGTGGGACTCCAGGCACCATCTGTTCT...TTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGGGGCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp AGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGCCTGGGGAGAACAGATaGTGCCTGGAGTCCCACATG +
Preference number: 4 (lower is better)
Translates to: RGVEAASAYAQAKFQESGPGENR*CLESHM
Trigger: CATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGG...CCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp AAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGGCCTGTCTACGGTCTaGGGACCGCCCCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KGGVSGSEVTGSPVTIKVGLSTV*GPPPLA
Trigger: AGCCAGAGGGGGCGGTCCCCAGACCGTAGACAGGCC...CACCTTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342753.8
CDS-3UTR TCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGCGGCTCGATACGCAGTaGGAAGTCACCGCGCTCAAA +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGRLDTQ*EVTALK
Trigger: TTTGAGCGCGGTGACTTCTCACTGCGTATCGAGCCG...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGGCAAATGTGGGGTGCTaGGAGTGGCAACACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGANVGC*EWQHRP
Trigger: TGGCCTGTGTTGCCACTCTCAGCACCCCACATTTGC...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGACCGAGGACCCTGAGTaGAGGAGAACAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGTEDPE*RRTAEL
Trigger: GAGCTCTGCTGTTCTCCTGCACTCAGGGTCCTCGGT...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000445648.5
CDS-3UTR GCA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTGGCAGGAGTAGGTaGCCTCGTCGGCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGGGRSR*PRRRPP
Trigger: TGGAGGTCGCCGACGAGGGCACCTACTCCTGCCACC...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp GCAAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGCGGAGCATCAGGAGATaGCCCGAGGAGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: ARAGIQVSRSLGRTDGAWRSIRR*PEEHRQ
Trigger: CTGTCTGTGCTCCTCGGGGCATCTCCTGATGCTCCG...CCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp GGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAATGTGGAGGCGGCCTCTaGATACGCCCAGGCCAAATT +
Preference number: 4 (lower is better)
Translates to: GLCIRPGQIPGKRDQPLECGGGL*IRPGQI
Trigger: AATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACA...TTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGACCCCAACTTCAAGGCTaGCAAGTTCTGATGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGPQLQG*QVLMGV
Trigger: CACTCCCATCAGAACTTGGCAGCCTTGAAGTTGGGG...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp GGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACCTCTGTGACAGCAAATaGCAGGCGAGGCCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GRVQGRGVRVRSHREPSDLCDSK*QARPED
Trigger: GTCCTCAGGCCTCGCCTGGCATTTGCTGTCACAGAG...GTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR GCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGCAGCCTCCTGGACTGTaGTGCATGTGGTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGQPPGL*CMWWRE
Trigger: TTCCCTCCACCACATGCAGCACAGTCCAGGAGGCTG...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTCAAAGGCCGCAGGGGTaGGGGCTATGCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSQRPQG*GLCCHQ
Trigger: TTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTG...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCCAAAGGCCGCAGGGGTaGGGGCTATGCTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPQRPQG*GLCCHQ
Trigger: TTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTG...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCTGGGGGAGCTCTCGGTaGCAGGCAGCACCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLWGSSR*QAAPQE
Trigger: CTCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCA...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp TCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAAGGGGTGGAGTCCCACATGGTaGTACAGGTGGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SAYAQAKFQESGTSRWKGWSPTW*YRWGSS
Trigger: AGAGCTCCCCCACCTGTACCACCATGTGGGACTCCA...CCCCTTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp GGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTGGAGTCCCACATGGTaGTACAGGTGGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GRVQGRGVRVRSHREPSDWSPTW*YRWGSS
Trigger: AGAGCTCCCCCACCTGTACCACCATGTGGGACTCCA...GTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCGCCTGGAGTCCCACATaGTGGTACAGGTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPAWSPT*WYRWGS
Trigger: GCTCCCCCACCTGTACCACCATGTGGGACTCCAGGC...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACCCTGGGGAGAACAGATaGTGCCTGGAGTCCCACATG +
Preference number: 4 (lower is better)
Translates to: GRVQGRGVRVRSHREPSDPGENR*CLESHM
Trigger: CATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGG...GTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGCCTGGGGAGAACAGATaGTGCCTGGAGTCCCACATG +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGPGENR*CLESHM
Trigger: CATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGG...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCAAGTCAGCAGGTCCCTaGGGAGAACAGATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VEAASAYAQAKFQESGTSKSAGP*GEQMVP
Trigger: AGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTT...GCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp GAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCGGGTGCAGCCCCAGGTaGCCCAAAGCAACACAGAGG +
Preference number: 4 (lower is better)
Translates to: ESKGGVSGSEVTGSPVTIGCSPR*PKATQR
Trigger: CCTCTGTGTTGCTTTGGGCCACCTGGGGCTGCACCC...GATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCGGGTGCAGCCCCAGGTaGCCCAAAGCAACACAGAGG +
Preference number: 4 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPGCSPR*PKATQR
Trigger: CCTCTGTGTTGCTTTGGGCCACCTGGGGCTGCACCC...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp AAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGGACATCACGGAGGCCTaGGCCTGTCTACGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KGWHSSQQVPGENRWCLEDITEA*ACLRSG
Trigger: CCCAGACCGTAGACAGGCCCAGGCCTCCGTGATGTC...CTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342753.8
CDS-3UTR TCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTGGGTACCGAGGACCCTaGGTGCAGGAGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSGYRGP*VQENSR
Trigger: TCTGCTGTTCTCCTGCACTCAGGGTCCTCGGTACCC...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp GCAAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGCGGCTCGATACGCAGTaGGAAGTCACCGCGCTCAAA +
Preference number: 4 (lower is better)
Translates to: ARAGIQVSRSLGRTDGAWRLDTQ*EVTALK
Trigger: TTTGAGCGCGGTGACTTCTCACTGCGTATCGAGCCG...CCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGAAACATCCTTCCCCTTTaGCTTTCCCGACTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGNILPL*LSRLLV
Trigger: GACCAGAAGTCGGGAAAGTCAAAGGGGAAGGATGTT...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp TCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAAGGGGTCACAGGGAGCCCAGTaGCTATCAAGGTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SAYAQAKFQESGTSRWKGSQGAQ*LSRWLR
Trigger: TCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGA...CCCCTTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR TCA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGTCACAGGGAGCCCAGTaGCTATCAAGGTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVSQGAQ*LSRWLR
Trigger: TCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGA...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTCGTCTCCTCCACCGCTaGGTGCAGGAGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSRLLHR*VQENSR
Trigger: TCTGCTGTTCTCCTGCACTCAGCGGTGGAGGAGACG...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342753.8
CDS-3UTR GCA 90 bp GCAAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTGATGGTGCAGGTTaGAGGTGTACAGCCCCGCGT +
Preference number: 4 (lower is better)
Translates to: ARAGIQVSRSLGRTDGAWSDGAG*RCTAPR
Trigger: ACGCGGGGCTGTACACCTGCAACCTGCACCATCACT...CCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGCAGGGCCTCCCTATTTaGAGTTCTCCTTCCGGAACC +
Preference number: 4 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVQGLPI*SSPSGT
Trigger: GGTTCCGGAAGGAGAACTGCAAATAGGGAGGCCCTG...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp AAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGAGAAAGGGCAAGGGGTaGAGCCCCAGGTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: KGWHSSQQVPGENRWCLERKGKG*SPRWPK
Trigger: TTTGGGCCACCTGGGGCTGCACCCCTTGCCCTTTCT...CTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp GAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGAGGTCCACCAGCAGATaGAAATGTGGGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: EGCGGGLCIRPGQIPGKRRSTSR*KCGVLR
Trigger: TCTCAGCACCCCACATTTGCATCTGCTGGTGGACCT...CCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTACCTGGGTGCCAGGCTTaGTGGGCACTGGGGACTCAG +
Preference number: 4 (lower is better)
Translates to: EVTGSPVTIKVAESKARVPGCQA*WALGTQ
Trigger: CTGAGTCCCCAGTGCCCAGCAAGCCTGGCACCCAGG...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CCA 90 bp AAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGACATTGATGACGTTGTaGCCGCGCGCCAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: KGWHSSQQVPGENRWCLETLMTL*PRASVG
Trigger: CCCCACACTGGCGCGCGGCCACAACGTCATCAATGT...CTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCACATTGATGACGTTGTaGCCGCGCGCCAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ESKGGVSGSEVTGSPVTITLMTL*PRASVG
Trigger: CCCCACACTGGCGCGCGGCCACAACGTCATCAATGT...GATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAAAGCTGCTGGAAGAAGTaGGCTCGGCTCTCGGGGACG +
Preference number: 4 (lower is better)
Translates to: VQGRGVRVRSHREPSDYQSCWKK*ARLSGT
Trigger: CGTCCCCGAGAGCCGAGCCCACTTCTTCCAGCAGCT...TTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCCCTGGGAGAGGGGTGTaGAGGCGGCCTCTGCATACG +
Preference number: 4 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLPGRGV*RRPLHT
Trigger: CGTATGCAGAGGCCGCCTCCACACCCCTCTCCCAGG...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTACATGGTGGTACAGGTaGGGGAGCTCTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSTWWYR*GSSRWQ
Trigger: CTGCCACCGAGAGCTCCCCCACCTGTACCACCATGT...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAAGCCTGGAGTCCCACATaGTGGTACAGGTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VQGRGVRVRSHREPSDYQAWSPT*WYRWGS
Trigger: GCTCCCCCACCTGTACCACCATGTGGGACTCCAGGC...TTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCAGAACAGATGGTGCCTaGAGTCCCACATGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: VEAASAYAQAKFQESGTSRTDGA*SPTWWY
Trigger: GTACCACCATGTGGGACTCCAGGCACCATCTGTTCT...GCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCGGGTGCCAGGCTTGCTaGGCACTGGGGACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLGCQAC*ALGTQH
Trigger: GTGCTGAGTCCCCAGTGCCCAGCAAGCCTGGCACCC...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR TCA 90 bp GAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCCGGCTCGATACGCAGTaGGAAGTCACCGCGCTCAAA +
Preference number: 4 (lower is better)
Translates to: ESKGGVSGSEVTGSPVTIRLDTQ*EVTALK
Trigger: TTTGAGCGCGGTGACTTCTCACTGCGTATCGAGCCG...GATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp AGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGAACATCCTTCCCCTTTaGCTTTCCCGACTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RGVEAASAYAQAKFQESGNILPL*LSRLLV
Trigger: GACCAGAAGTCGGGAAAGTCAAAGGGGAAGGATGTT...CCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR TCA 90 bp GGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAACATCCTTCCCCTTTaGCTTTCCCGACTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GVEAASAYAQAKFQESGTNILPL*LSRLLV
Trigger: GACCAGAAGTCGGGAAAGTCAAAGGGGAAGGATGTT...GGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR TCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTGCAAATGTGGGGTGCTaGGAGTGGCAACACAGGCCA +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSANVGC*EWQHRP
Trigger: TGGCCTGTGTTGCCACTCTCAGCACCCCACATTTGC...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCGCAAATGTGGGGTGCTaGGAGTGGCAACACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPANVGC*EWQHRP
Trigger: TGGCCTGTGTTGCCACTCTCAGCACCCCACATTTGC...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp AAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAAGGTGAAGCATCTGGTCCCCTaGAGCCACAGCGAACTCCGC +
Preference number: 4 (lower is better)
Translates to: KGGVSGSEVTGSPVTIKVKHLVP*SHSELR
Trigger: GCGGAGTTCGCTGTGGCTGCAGGGGACCAGATGCTT...CACCTTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp AAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAAGGTGCGGAGCATCAGGAGATaGCCCGAGGAGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: KGGVSGSEVTGSPVTIKVRSIRR*PEEHRQ
Trigger: CTGTCTGTGCTCCTCGGGGCATCTCCTGATGCTCCG...CACCTTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGCCCCAACTTCAAGGCTaGCAAGTTCTGATGGGAGTG +
Preference number: 4 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVPQLQG*QVLMGV
Trigger: CACTCCCATCAGAACTTGGCAGCCTTGAAGTTGGGG...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp AAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGACCGAGGACCCTGAGTaGAGGAGAACAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: KGWHSSQQVPGENRWCLETEDPE*RRTAEP
Trigger: AGGCTCTGCTGTTCTCCTGCACTCAGGGTCCTCGGT...CTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCAGCTGCTGGAAGAAGTaGGCTCGGCTCTCGGGGACG +
Preference number: 4 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLSCWKK*ARLSGT
Trigger: CGTCCCCGAGAGCCGAGCCCACTTCTTCCAGCAGCT...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GAGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGCATGATGGGCATCAGTaGGATTTTGGTTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: EGCGGGLCIRPGQIPGKRHDGHQ*DFGCAR
Trigger: CCTGGCACAACCAAAATCCCACTGATGCCCATCATG...CCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTACATGGTGGTACAGGTaGGGGAGCTCTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGTWWYR*GSSRWQ
Trigger: CTGCCACCGAGAGCTCCCCCACCTGTACCACCATGT...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCTGGAGTCCCACATGGTaGTACAGGTGGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ESKGGVSGSEVTGSPVTIWSPTW*YRWGSS
Trigger: AGAGCTCCCCCACCTGTACCACCATGTGGGACTCCA...GATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCGCCTGGAGTCCCACATaGTGGTACAGGTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLAWSPT*WYRWGS
Trigger: GCTCCCCCACCTGTACCACCATGTGGGACTCCAGGC...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGAGAACAGATGGTGCCTaGAGTCCCACATGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGRTDGA*SPTWWY
Trigger: GTACCACCATGTGGGACTCCAGGCACCATCTGTTCT...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTACAGTTTTCCCTGCGTaGGGCTGGGTCTCCTACCCA +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSTVFPA*GWVSYP
Trigger: TGGGTAGGAGACCCAGCCCCACGCAGGGAAAACTGT...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR TCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCGGGTACCGAGGACCCTaGGTGCAGGAGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLGYRGP*VQENSR
Trigger: TCTGCTGTTCTCCTGCACTCAGGGTCCTCGGTACCC...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp GGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAAAACATCCTTCCCCTTTaGCTTTCCCGACTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GLCIRPGQIPGKRDQPLENILPL*LSRLLV
Trigger: GACCAGAAGTCGGGAAAGTCAAAGGGGAAGGATGTT...TTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR TCA 90 bp GCAAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAAGGGTCTGAGGGCATaGTGGGCATCAGTGGGATTT +
Preference number: 4 (lower is better)
Translates to: ARAGIQVSRSLGRTDGAWKGLRA*WASVGF
Trigger: AAATCCCACTGATGCCCATCATGCCCTCAGACCCTT...CCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR TCA 90 bp AAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCACAGGGAGCCCAGTaGCTATCAAGGTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KGWHSSQQVPGENRWCLESQGAQ*LSRWLR
Trigger: TCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGA...CTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTTGTGGAGGCGGCCTCTaGATACGCCCAGGCCAAATT +
Preference number: 4 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGCGGGL*IRPGQI
Trigger: AATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACA...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATCCGCGCAGGTCCCAGTaGAGCACGCGCTGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: KSDGDFIVMVAGPPADANPRRSQ*STRWRS
Trigger: CGACCGCCAGCGCGTGCTCCACTGGGACCTGCGCGG...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGCATGATGGGCATCAGTaGGATTTTGGTTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVHDGHQ*DFGCAR
Trigger: CCTGGCACAACCAAAATCCCACTGATGCCCATCATG...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCACATGGTGGTACAGGTaGGGGAGCTCTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLTWWYR*GSSRWQ
Trigger: CTGCCACCGAGAGCTCCCCCACCTGTACCACCATGT...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAATGGAGTCCCACATGGTaGTACAGGTGGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VQGRGVRVRSHREPSDYQWSPTW*YRWGSS
Trigger: AGAGCTCCCCCACCTGTACCACCATGTGGGACTCCA...TTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp AAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAAGGTGCCTGGGGAGAACAGATaGTGCCTGGAGTCCCACATG +
Preference number: 4 (lower is better)
Translates to: KGGVSGSEVTGSPVTIKVPGENR*CLESHM
Trigger: CATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGG...CACCTTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTAAGTCAGCAGGTCCCTaGGGAGAACAGATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSKSAGP*GEQMVP
Trigger: AGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTT...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAAGGGTCTGAGGGCATaGTGGGCATCAGTGGGATTT +
Preference number: 4 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPKGLRA*WASVGF
Trigger: AAATCCCACTGATGCCCATCATGCCCTCAGACCCTT...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR TCA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATATGCCAGGCGAGGCCTaGGGACGCGGCTTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: KSDGDFIVMVAGPPADANMPGEA*GRGFQA
Trigger: CGCCTGGAAGCCGCGTCCTCAGGCCTCGCCTGGCAT...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR TCA 90 bp GTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAACGGATCATCGATGGCTaGAGAGTCCCACTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: VQGRGVRVRSHREPSDYQRIIDG*RVPLPV
Trigger: GACAGGAAGTGGGACTCTTCAGCCATCGATGATCCG...TTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR GCA 90 bp TGGGCATCAGTGGGATTTTGGTTGTGCCAGGGGTGGGCAGGGCCACCCGTGAGCAGAACAGCAGAGCTCTaGAGAAGCACAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: WASVGFWLCQGWAGPPVSRTAEL*RSTSFQ
Trigger: TTGGAAACTTGTGCTTCTGCAGAGCTCTGCTGTTCT...GCTCACGGGTGGCCCTGCCCACCCCTGGCACAACCAAAATCCCACTGATGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000342753.8
CDS-3UTR GCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCAGTGATGGTGCAGGTTaGAGGTGTACAGCCCCGCGT +
Preference number: 4 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLSDGAG*RCTAPR
Trigger: ACGCGGGGCTGTACACCTGCAACCTGCACCATCACT...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTCAGGGCCTCCCTATTTaGAGTTCTCCTTCCGGAACC +
Preference number: 4 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGQGLPI*SSPSGT
Trigger: GGTTCCGGAAGGAGAACTGCAAATAGGGAGGCCCTG...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCTGTGGAGGCGGCCTCTaGATACGCCCAGGCCAAATT +
Preference number: 4 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLCGGGL*IRPGQI
Trigger: AATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACA...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR GCA 90 bp GAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAGGTCCACCAGCAGATaGAAATGTGGGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ESKGGVSGSEVTGSPVTIRSTSR*KCGVLR
Trigger: TCTCAGCACCCCACATTTGCATCTGCTGGTGGACCT...GATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp AAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGAGGTCCACCAGCAGATaGAAATGTGGGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KGWHSSQQVPGENRWCLERSTSR*KCGVLR
Trigger: TCTCAGCACCCCACATTTGCATCTGCTGGTGGACCT...CTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTAAGTCAGCAGGTCCCTaGGGAGAACAGATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGKSAGP*GEQMVP
Trigger: AGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTT...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp GGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACAGAACAGCAGAGCTCTaGAGAAGCACAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GRVQGRGVRVRSHREPSDRTAEL*RSTSFQ
Trigger: TTGGAAACTTGTGCTTCTGCAGAGCTCTGCTGTTCT...GTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
CDS-3UTR GCA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATCCTGGGTCCACACCATaGGCGGGCTCTGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: KSDGDFIVMVAGPPADANPGSTP*AGSGSA
Trigger: TGCGCTGCCAGAGCCCGCGCATGGTGTGGACCCAGG...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp AAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAAGGTGAGGTCCACCAGCAGATaGAAATGTGGGGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KGGVSGSEVTGSPVTIKVRSTSR*KCGVLR
Trigger: TCTCAGCACCCCACATTTGCATCTGCTGGTGGACCT...CACCTTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp AAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAAGGTGAGAACAGATGGTGCCTaGAGTCCCACATGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: KGGVSGSEVTGSPVTIKVRTDGA*SPTWWY
Trigger: GTACCACCATGTGGGACTCCAGGCACCATCTGTTCT...CACCTTGATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCAAGTCAGCAGGTCCCTaGGGAGAACAGATGGTGCCT +
Preference number: 4 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLKSAGP*GEQMVP
Trigger: AGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTT...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CCA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATTCCTGCCGGGCCCCTTaGCCTCCCCCATCGTTGCTG +
Preference number: 4 (lower is better)
Translates to: KSDGDFIVMVAGPPADANSCRAP*PPPSLL
Trigger: CAGCAACGATGGGGGAGGCCAAGGGGCCCGGCAGGA...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342753.8
CDS-3UTR CCA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTACAGCGGATCATCGATaGCTGAAGAGTCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGTADHR*LKSPTS
Trigger: GGAAGTGGGACTCTTCAGCCATCGATGATCCGCTGT...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CCA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTCATGATGGGCATCAGTaGGATTTTGGTTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGHDGHQ*DFGCAR
Trigger: CCTGGCACAACCAAAATCCCACTGATGCCCATCATG...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CCA 90 bp GCAAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGTGTTTTTGTAATCTGTaGGAGGAGAGGAGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: ARAGIQVSRSLGRTDGAWCFCNL*EERRLA
Trigger: AGCTAGCCTCCTCTCCTCCCACAGATTACAAAAACA...CCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445648.5
CDS-3UTR GCA 90 bp GAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCAGAACAGCAGAGCTCTaGAGAAGCACAAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: ESKGGVSGSEVTGSPVTIRTAEL*RSTSFQ
Trigger: TTGGAAACTTGTGCTTCTGCAGAGCTCTGCTGTTCT...GATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
CDS-3UTR GCA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATAAGCATCTGGTCCCCTaGAGCCACAGCGAACTCCGC +
Preference number: 4 (lower is better)
Translates to: KSDGDFIVMVAGPPADANKHLVP*SHSELR
Trigger: GCGGAGTTCGCTGTGGCTGCAGGGGACCAGATGCTT...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR GCA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATAGAAAGGGCAAGGGGTaGAGCCCCAGGTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: KSDGDFIVMVAGPPADANRKGKG*SPRWPK
Trigger: TTTGGGCCACCTGGGGCTGCACCCCTTGCCCTTTCT...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATCGGCTCGATACGCAGTaGGAAGTCACCGCGCTCAAA +
Preference number: 4 (lower is better)
Translates to: KSDGDFIVMVAGPPADANRLDTQ*EVTALK
Trigger: TTTGAGCGCGGTGACTTCTCACTGCGTATCGAGCCG...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR TCA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATGCAAATGTGGGGTGCTaGGAGTGGCAACACAGGCCA +
Preference number: 4 (lower is better)
Translates to: KSDGDFIVMVAGPPADANANVGC*EWQHRP
Trigger: TGGCCTGTGTTGCCACTCTCAGCACCCCACATTTGC...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS GCA 90 bp CCCCCGGGGCCGCGCAGGTCCCAGTGGAGCACGCGCTGGCGGTCGTaGAGCCGGTCCTGGGTCCACACCATGCGCGGGCTCTGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: PPGPRRSQWSTRWRS*SRSWVHTMRGLWQR
Trigger: GCGCTGCCAGAGCCCGCGCATGGTGTGGACCCAGGACCGGCTGCACGACCGCCAGCGCGTGCTCCACTGGGACCTGCGCGGCCCCGGGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS CCA 90 bp CGCAGGTCCCAGTGGAGCACGCGCTGGCGGTCGTGCAGCCGGTCCTaGGTCCACACCATGCGCGGGCTCTGGCAGCGCAGCACCGCCCGG +
Preference number: 5 (lower is better)
Translates to: RRSQWSTRWRSCSRS*VHTMRGLWQRSTAR
Trigger: CCGGGCGGTGCTGCGCTGCCAGAGCCCGCGCATGGTGTGGACCCAGGACCGGCTGCACGACCGCCAGCGCGTGCTCCACTGGGACCTGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS GCA 90 bp GGGCGCCCGCCTCCCAGCTCACCGCGGACTCGGACACCACGGAGCTaGCAGCAGCGGCGGGTACCGAGGACCCTGAGTGCAGGAGAACAG +
Preference number: 5 (lower is better)
Translates to: GRPPPSSPRTRTPRS*QQRRVPRTLSAGEQ
Trigger: CTGTTCTCCTGCACTCAGGGTCCTCGGTACCCGCCGCTGCTGGCAGCTCCGTGGTGTCCGAGTCCGCGGTGAGCTGGGAGGCGGGCGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS GCA 90 bp GTCGGTCCACACGTGCCCGCGGTTCACGCAGGTCAGAAGCGCGGGTaGGCCGCGCGCCACCGCCAGCACCTCCTTCTCGCCGTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: VGPHVPAVHAGQKRG*AARHRQHLLLAVPV
Trigger: TACTGGGACGGCGAGAAGGAGGTGCTGGCGGTGGCGCGCGGCGCACCCGCGCTTCTGACCTGCGTGAACCGCGGGCACGTGTGGACCGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000464351.1
ENST00000477278.3
CDS GCA 90 bp GTGCAGGTTGCAGGTGTACAGCCCCGCGTCCGTCTCCTCCACCGCTaGGCACCCAGGAGGAAGCCGCGCGTGAGCCTTGCGGTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: VQVAGVQPRVRLLHR*APRRKPRVSLAVPP
Trigger: CGGGGGCACCGCAAGGCTCACGCGCGGCTTCCTCCTGGGTGCGCAGCGGTGGAGGAGACGGACGCGGGGCTGTACACCTGCAACCTGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460473.1
CDS-3UTR CAA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGACTGTGGCTGGAGCCGTaGCCCGGAGAGCCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGLWLEP*PGEPRG
Trigger: CCCCCGGGGCTCTCCGGGCAACGGCTCCAGCCACAG...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS GCA 90 bp GCGAGGCCTGAGGACGCGGCTTCCAGGCGCAGCCAGTGGCGGGGCTaGCAGGAGTGGTCTTGGGACGCCAGGGACCCTGTGTGTGTGGTA +
Preference number: 5 (lower is better)
Translates to: ARPEDAASRRSQWRG*QEWSWDARDPVCVV
Trigger: TACCACACACACAGGGTCCCTGGCGTCCCAAGACCACTCCTGGCAGCCCCGCCACTGGCTGCGCCTGGAAGCCGCGTCCTCAGGCCTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CAA 90 bp GGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACCTGTGGCTGGAGCCGTaGCCCGGAGAGCCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: GRVQGRGVRVRSHREPSDLWLEP*PGEPRG
Trigger: CCCCCGGGGCTCTCCGGGCAACGGCTCCAGCCACAG...GTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS TCA 90 bp GGAGTAGGTGCCCTCGTCGGCGACCTCCAGCGGCTCGATACGCAGTaGGAAGTCACCGCGCTCAAAGGCATCCGCGCCCACAGCCACGCG +
Preference number: 5 (lower is better)
Translates to: GVGALVGDLQRLDTQ*EVTALKGIRAHSHA
Trigger: CGCGTGGCTGTGGGCGCGGATGCCTTTGAGCGCGGTGACTTCTCACTGCGTATCGAGCCGCTGGAGGTCGCCGACGAGGGCACCTACTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000476718.1
ENST00000477278.3
CDS-3UTR CAA 90 bp GGGCCACCCGTGAGCAAAGGCCGCAGGGGTGGGGGCTATGCTGCCACCAAGCCCTCGGGGACGATGACATaGATGACGTTGTGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: GPPVSKGRRGGGYAATKPSGTMT*MTLWPR
Trigger: GCGCGGCCACAACGTCATCAATGTCATCGTCCCCGA...GGGCTTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTGCTCACGGGTGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS TCA 90 bp CTCGGACACCACGGAGCTGCCAGCAGCGGCGGGTACCGAGGACCCTaGGTGCAGGAGAACAGCAGAGCCTGTGGCCGCACAGCGGATCAT +
Preference number: 5 (lower is better)
Translates to: LGHHGAASSGGYRGP*VQENSRACGRTADH
Trigger: ATGATCCGCTGTGCGGCCACAGGCTCTGCTGTTCTCCTGCACTCAGGGTCCTCGGTACCCGCCGCTGCTGGCAGCTCCGTGGTGTCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS GCA 90 bp GGCGAGGACGGACGGACCCAAGGAAGCAACCTCTGTGACAGCAAATaGCAGGCGAGGCCTGAGGACGCGGCTTCCAGGCGCAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: GEDGRTQGSNLCDSK*QARPEDAASRRSQW
Trigger: CCACTGGCTGCGCCTGGAAGCCGCGTCCTCAGGCCTCGCCTGGCATTTGCTGTCACAGAGGTTGCTTCCTTGGGTCCGTCCGTCCTCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS CCA 90 bp GCTGAGGTCGCCCCCGCCGCTCACCTTTGTCTAGGTCGATGTACTTaGCAGGCAGGGGGCTGTGGGCCAGCTCCGCCCTCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: AEVAPAAHLCLGRCT*QAGGCGPAPPSPSG
Trigger: TCCTGAAGGAGAGGGCGGAGCTGGCCCACAGCCCCCTGCCTGCCAAGTACATCGACCTAGACAAAGGTGAGCGGCGGGGGCGACCTCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473097.5
ENST00000478517.5
CDS-3UTR CAA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTCTGTGGCTGGAGCCGTaGCCCGGAGAGCCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSLWLEP*PGEPRG
Trigger: CCCCCGGGGCTCTCCGGGCAACGGCTCCAGCCACAG...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCCTGTGGCTGGAGCCGTaGCCCGGAGAGCCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPLWLEP*PGEPRG
Trigger: CCCCCGGGGCTCTCCGGGCAACGGCTCCAGCCACAG...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp GGGCCACCCGTGAGCAAAGGCCGCAGGGGTGGGGGCTATGCTGCCACCAAGCCCCCAGGGCCTCCCTATTaGCAGTTCTCCTTCCGGAAC +
Preference number: 5 (lower is better)
Translates to: GPPVSKGRRGGGYAATKPPGPPY*QFSFRN
Trigger: GTTCCGGAAGGAGAACTGCAAATAGGGAGGCCCTGG...GGGCTTGGTGGCAGCATAGCCCCCACCCCTGCGGCCTTTGCTCACGGGTGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CAA 90 bp GGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCCCAGCCATGGCCCTCTaGGACCCCAGCCTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: GVEAASAYAQAKFQESGTPAMAL*DPSLLD
Trigger: GTCCAGGAGGCTGGGGTCCAAGAGGGCCATGGCTGG...GGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS CCA 90 bp CAGGAGCCCAGGGCCTCCCTATTTGCAGTTCTCCTTCCGGAACCCTaGAAGCCAAGGGCGCCAACGGGTTGGCGGCTGTCCTCCACCCTC +
Preference number: 5 (lower is better)
Translates to: QEPRASLFAVLLPEP*KPRAPTGWRLSSTL
Trigger: GAGGGTGGAGGACAGCCGCCAACCCGTTGGCGCCCTTGGCTTCCAGGGTTCCGGAAGGAGAACTGCAAATAGGGAGGCCCTGGGCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473097.5
ENST00000478517.5
CDS-3UTR CAA 90 bp GTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCTGCCAGGAGTGGTCTaGGGACGCCAGGGACCCTGT +
Preference number: 5 (lower is better)
Translates to: VEAASAYAQAKFQESGTSLPGVV*GRQGPC
Trigger: ACAGGGTCCCTGGCGTCCCAAGACCACTCCTGGCAG...GCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS CCA 90 bp GAAGCGTTTGCTGACCACCTCCTGGGTGCCAGGCTTGCTGGGCACTaGGGACTCAGCACTAAGCCGGGTGCCAGCCATGGCCCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: EAFADHLLGARLAGH*GLSTKPGASHGPLG
Trigger: TCCAAGAGGGCCATGGCTGGCACCCGGCTTAGTGCTGAGTCCCCAGTGCCCAGCAAGCCTGGCACCCAGGAGGTGGTCAGCAAACGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CAA 90 bp AGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGGCCCAGCCCCAGGCTTaGTCCCACTCGGCTCTAAGT +
Preference number: 5 (lower is better)
Translates to: RGVEAASAYAQAKFQESGAQPQA*SHSALS
Trigger: ACTTAGAGCCGAGTGGGACAAAGCCTGGGGCTGGGC...CCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000342753.8
CDS-3UTR CAA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGCCAGTGCACCACCTGTaGAGCCTCCTCCACGTGCCG +
Preference number: 5 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVPVHHL*SLLHVP
Trigger: CGGCACGTGGAGGAGGCTCAACAGGTGGTGCACTGG...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGATCTAGGTCGATGTACTaGGCAGGCAGGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGSRSMY*AGRGLW
Trigger: CCACAGCCCCCTGCCTGCCAAGTACATCGACCTAGA...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp GTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCGTGGTGACCGCACCCTaGGAGGGACAAGAAGGTCCG +
Preference number: 5 (lower is better)
Translates to: VEAASAYAQAKFQESGTSVVTAP*EGQEGP
Trigger: CGGACCTTCTTGTCCCTCCAAGGGTGCGGTCACCAC...GCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342753.8
CDS-3UTR CAA 90 bp TCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTGGTACAGGTGGGGGGCCCAGCCCCAGGCTTaGTCCCACTCGGCTCTAAGT +
Preference number: 5 (lower is better)
Translates to: SLGRTDGAWSPTWWYRWGAQPQA*SHSALS
Trigger: ACTTAGAGCCGAGTGGGACAAAGCCTGGGGCTGGGC...CCCCCACCTGTACCACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000342753.8
CDS-3UTR CAA 90 bp GGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCATGAGCAGCGAGAAGTaGCCGTCGTCGAAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: GVEAASAYAQAKFQESGTMSSEK*PSSKAE
Trigger: CTCGGCCTTCGACGACGGCAACTTCTCGCTGCTCAT...GGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000477278.3
CDS-3UTR CAA 90 bp TCCCACATGGTGGTACAGGTGGGGGAGCTCTCGGTGGCAGGCAGCACCCCAGGACCAGGGCCTCCCTATTaGCAGTTCTCCTTCCGGAAC +
Preference number: 5 (lower is better)
Translates to: SHMVVQVGELSVAGSTPGPGPPY*QFSFRN
Trigger: GTTCCGGAAGGAGAACTGCAAATAGGGAGGCCCTGG...TCCTGGGGTGCTGCCTGCCACCGAGAGCTCCCCCACCTGTACCACCATGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS GCA 90 bp GTTCGTGCAGGCCACAGTAATGGTGGTGCAGGTGGCAGGAGTAGGTaGCCTCGTCGGCGACCTCCAGCGGCTCGATACGCAGTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: VRAGHSNGGAGGRSR*PRRRPPAARYAVRS
Trigger: ACTTCTCACTGCGTATCGAGCCGCTGGAGGTCGCCGACGAGGGCACCTACTCCTGCCACCTGCACCACCATTACTGTGGCCTGCACGAAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000476718.1
ENST00000477278.3
CDS-3UTR CAA 90 bp TCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAAGGGGATGAGCAGCGAGAAGTaGCCGTCGTCGAAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: SAYAQAKFQESGTSRWKGMSSEK*PSSKAE
Trigger: CTCGGCCTTCGACGACGGCAACTTCTCGCTGCTCAT...CCCCTTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309212.11
ENST00000477278.3
CDS-3UTR CAA 90 bp AGGGGTGTGGAGGCGGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGATGACATTGATGACGTaGTGGCCGCGCGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: RGVEAASAYAQAKFQESGMTLMT*WPRASV
Trigger: CACACTGGCGCGCGGCCACAACGTCATCAATGTCAT...CCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCCGCCTCCACACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CAA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGTCGGGGACGATGACATaGATGACGTTGTGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVSGTMT*MTLWPR
Trigger: GCGCGGCCACAACGTCATCAATGTCATCGTCCCCGA...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp TCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAAGGGGTCTAGGTCGATGTACTaGGCAGGCAGGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SAYAQAKFQESGTSRWKGSRSMY*AGRGLW
Trigger: CCACAGCCCCCTGCCTGCCAAGTACATCGACCTAGA...CCCCTTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CAA 90 bp GGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTCAGTGGGATTTTGGTaGTGCCAGGGGTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GRVQGRGVRVRSHREPSDSVGFW*CQGWAG
Trigger: CCCTGCCCACCCCTGGCACAACCAAAATCCCACTGA...GTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS CCA 90 bp AGAGTCCCACTTCCTGTCGTTCAGAAGCGTTTGCTGACCACCTCCTaGGTGCCAGGCTTGCTGGGCACTGGGGACTCAGCACTAAGCCGG +
Preference number: 5 (lower is better)
Translates to: RVPLPVVQKRLLTTS*VPGLLGTGDSALSR
Trigger: CCGGCTTAGTGCTGAGTCCCCAGTGCCCAGCAAGCCTGGCACCCAGGAGGTGGTCAGCAAACGCTTCTGAACGACAGGAAGTGGGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CAA 90 bp GGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAAATGACATTGATGACGTaGTGGCCGCGCGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: GLCIRPGQIPGKRDQPLEMTLMT*WPRASV
Trigger: CACACTGGCGCGCGGCCACAACGTCATCAATGTCAT...TTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CAA 90 bp GCAAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGTCAGTGGGATTTTGGTaGTGCCAGGGGTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: ARAGIQVSRSLGRTDGAWSVGFW*CQGWAG
Trigger: CCCTGCCCACCCCTGGCACAACCAAAATCCCACTGA...CCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CAA 90 bp GAAGTCACAGGGAGCCCAGTGACTATCAAGGTGGCTGAGAGCAAGGCTAGGGTACCAGTGCACCACCTGTaGAGCCTCCTCCACGTGCCG +
Preference number: 5 (lower is better)
Translates to: EVTGSPVTIKVAESKARVPVHHL*SLLHVP
Trigger: CGGCACGTGGAGGAGGCTCAACAGGTGGTGCACTGG...TACCCTAGCCTTGCTCTCAGCCACCTTGATAGTCACTGGGCTCCCTGTGACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCCCAGTGCACCACCTGTaGAGCCTCCTCCACGTGCCG +
Preference number: 5 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLPVHHL*SLLHVP
Trigger: CGGCACGTGGAGGAGGCTCAACAGGTGGTGCACTGG...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp GCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCAGGCAGAGTTCGGGGACGATGACATaGATGACGTTGTGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: ASTEAKCSPSPRLQPRQSSGTMT*MTLWPR
Trigger: GCGCGGCCACAACGTCATCAATGTCATCGTCCCCGA...ACTCTGCCTGGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp AAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCTAGGTCGATGTACTaGGCAGGCAGGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: KGWHSSQQVPGENRWCLESRSMY*AGRGLW
Trigger: CCACAGCCCCCTGCCTGCCAAGTACATCGACCTAGA...CTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCTCTAGGTCGATGTACTaGGCAGGCAGGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPSRSMY*AGRGLW
Trigger: CCACAGCCCCCTGCCTGCCAAGTACATCGACCTAGA...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp CTGTCCTCAGCCAGTACAGAAGCCAAATGTAGCCCCAGCCCTAGACTCCAGCCCTCAGTGGGATTTTGGTaGTGCCAGGGGTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LSSASTEAKCSPSPRLQPSVGFW*CQGWAG
Trigger: CCCTGCCCACCCCTGGCACAACCAAAATCCCACTGA...GGGCTGGAGTCTAGGGCTGGGGCTACATTTGGCTTCTGTACTGGCTGAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS TCA 90 bp AGGAGAACAGCAGAGCCTGTGGCCGCACAGCGGATCATCGATGGCTaGAGAGTCCCACTTCCTGTCGTTCAGAAGCGTTTGCTGACCACC +
Preference number: 5 (lower is better)
Translates to: RRTAEPVAAQRIIDG*RVPLPVVQKRLLTT
Trigger: GGTGGTCAGCAAACGCTTCTGAACGACAGGAAGTGGGACTCTTCAGCCATCGATGATCCGCTGTGCGGCCACAGGCTCTGCTGTTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS CCA 90 bp GTGCAGGAGAACAGCAGAGCCTGTGGCCGCACAGCGGATCATCGATaGCTGAAGAGTCCCACTTCCTGTCGTTCAGAAGCGTTTGCTGAC +
Preference number: 5 (lower is better)
Translates to: VQENSRACGRTADHR*LKSPTSCRSEAFAD
Trigger: GTCAGCAAACGCTTCTGAACGACAGGAAGTGGGACTCTTCAGCCATCGATGATCCGCTGTGCGGCCACAGGCTCTGCTGTTCTCCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS-3UTR CAA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCATGAGCAGCGAGAAGTaGCCGTCGTCGAAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLMSSEK*PSSKAE
Trigger: CTCGGCCTTCGACGACGGCAACTTCTCGCTGCTCAT...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp TTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCCACATGGTATGACATTGATGACGTaGTGGCCGCGCGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: FKSAGPWGEQMVPGVPHGMTLMT*WPRASV
Trigger: CACACTGGCGCGCGGCCACAACGTCATCAATGTCAT...ACCATGTGGGACTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp GGCCTCTGCATACGCCCAGGCCAAATTCCAGGAAAGCGGGACCAGCCGCTGGAATCCTTCCGGAACCCTTaGTCTAGGTCGATGTACTTG +
Preference number: 5 (lower is better)
Translates to: GLCIRPGQIPGKRDQPLESFRNP*SRSMYL
Trigger: CAAGTACATCGACCTAGACAAAGGGTTCCGGAAGGA...TTCCAGCGGCTGGTCCCGCTTTCCTGGAATTTGGCCTGGGCGTATGCAGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CAA 90 bp CAGGCAGAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGAGCCCAGAAGGGTCTTaGTCTAGGTCGATGTACTTG +
Preference number: 5 (lower is better)
Translates to: QAESKGGVSGSEVTGSPVSPEGS*SRSMYL
Trigger: CAAGTACATCGACCTAGACAAAGACCCTTCTGGGCT...CACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445648.5
CDS-3UTR CAA 90 bp CAAATGTGGGGTGCTGAGAGTGGCAACACAGGCCACCCCAAACCAACTTCACTCATGACATTGATGACGTaGTGGCCGCGCGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: QMWGAESGNTGHPKPTSLMTLMT*WPRASV
Trigger: CACACTGGCGCGCGGCCACAACGTCATCAATGTCAT...GAGTGAAGTTGGTTTGGGGTGGCCTGTGTTGCCACTCTCAGCACCCCACATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp GAGTCCAAGGGAGGGGTGTCAGGGTCAGAAGTCACAGGGAGCCCAGTGACTATCTCCTTCCGGAACCCTTaGTCTAGGTCGATGTACTTG +
Preference number: 5 (lower is better)
Translates to: ESKGGVSGSEVTGSPVTISFRNP*SRSMYL
Trigger: CAAGTACATCGACCTAGACAAAGGGTTCCGGAAGGA...GATAGTCACTGGGCTCCCTGTGACTTCTGACCCTGACACCCCTCCCTTGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CAA 90 bp AAGGGCTGGCATTCAAGTCAGCAGGTCCCTGGGGAGAACAGATGGTGCCTGGAGTCCTTCCGGAACCCTTaGTCTAGGTCGATGTACTTG +
Preference number: 5 (lower is better)
Translates to: KGWHSSQQVPGENRWCLESFRNP*SRSMYL
Trigger: CAAGTACATCGACCTAGACAAAGGGTTCCGGAAGGA...CTCCAGGCACCATCTGTTCTCCCCAGGGACCTGCTGACTTGAATGCCAGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS-3UTR CAA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATTCGGGGACGATGACATaGATGACGTTGTGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: KSDGDFIVMVAGPPADANSGTMT*MTLWPR
Trigger: GCGCGGCCACAACGTCATCAATGTCATCGTCCCCGA...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS-3UTR CAA 90 bp AAATCAGATGGGGACTTTATTGTGATGGTGGCAGGTCCACCAGCAGATGCAAATCCAGGGCCTCCCTATTaGCAGTTCTCCTTCCGGAAC +
Preference number: 5 (lower is better)
Translates to: KSDGDFIVMVAGPPADANPGPPY*QFSFRN
Trigger: GTTCCGGAAGGAGAACTGCAAATAGGGAGGCCCTGG...ATTTGCATCTGCTGGTGGACCTGCCACCATCACAATAAAGTCCCCATCTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000477278.3
CDS GCA 72 bp GCTGGCGGTCGTGCAGCCGGTCCTGGGTCCACACCATaGGCGGGCTCTGGCAGCGCAGCACCGCCCGGGCGC +
Preference number: 6 (lower is better)
Translates to: AGGRAAGPGSTP*AGSGSAAPPGR
Trigger: GCGCCCGGGCGGTGCTGCGCTGCCAGAGCCCGCGCATGGTGTGGACCCAGGACCGGCTGCACGACCGCCAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS GCA 72 bp TCCAGGCGGCCGCGGTCCCGCGCCTCGTACACGCGCTaGTCGCCCGCCGAGTACAAGTCCAGCAGGCGCCGC +
Preference number: 6 (lower is better)
Translates to: SRRPRSRASYTR*SPAEYKSSRRR
Trigger: GCGGCGCCTGCTGGACTTGTACTCGGCGGGCGAGCAGCGCGTGTACGAGGCGCGGGACCGCGGCCGCCTGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS CCA 72 bp CCCCCGGGGCCGCGCAGGTCCCAGTGGAGCACGCGCTaGCGGTCGTGCAGCCGGTCCTGGGTCCACACCATG +
Preference number: 6 (lower is better)
Translates to: PPGPRRSQWSTR*RSCSRSWVHTM
Trigger: CATGGTGTGGACCCAGGACCGGCTGCACGACCGCCAGCGCGTGCTCCACTGGGACCTGCGCGGCCCCGGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS GCA 72 bp CCGCGCAGGTCCCAGTGGAGCACGCGCTGGCGGTCGTaGAGCCGGTCCTGGGTCCACACCATGCGCGGGCTC +
Preference number: 6 (lower is better)
Translates to: PRRSQWSTRWRS*SRSWVHTMRGL
Trigger: GAGCCCGCGCATGGTGTGGACCCAGGACCGGCTGCACGACCGCCAGCGCGTGCTCCACTGGGACCTGCGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS CCA 72 bp CAGTGGAGCACGCGCTGGCGGTCGTGCAGCCGGTCCTaGGTCCACACCATGCGCGGGCTCTGGCAGCGCAGC +
Preference number: 6 (lower is better)
Translates to: QWSTRWRSCSRS*VHTMRGLWQRS
Trigger: GCTGCGCTGCCAGAGCCCGCGCATGGTGTGGACCCAGGACCGGCTGCACGACCGCCAGCGCGTGCTCCACTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS TCA 72 bp ACCCCGGGCGGCTGCCGGTCCCAGTGCACCACCTGTTaGGCCTCCTCCACGTGCCGGTCGGTCCACACGTGC +
Preference number: 6 (lower is better)
Translates to: TPGGCRSQCTTC*ASSTCRSVHTC
Trigger: GCACGTGTGGACCGACCGGCACGTGGAGGAGGCTCAACAGGTGGTGCACTGGGACCGGCAGCCGCCCGGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS GCA 72 bp GCAGGTGTACAGCCCCGCGTCCGTCTCCTCCACCGCTaGGCACCCAGGAGGAAGCCGCGCGTGAGCCTTGCG +
Preference number: 6 (lower is better)
Translates to: AGVQPRVRLLHR*APRRKPRVSLA
Trigger: CGCAAGGCTCACGCGCGGCTTCCTCCTGGGTGCGCAGCGGTGGAGGAGACGGACGCGGGGCTGTACACCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460473.1
CDS GCA 72 bp GAGGACGCGGCTTCCAGGCGCAGCCAGTGGCGGGGCTaGCAGGAGTGGTCTTGGGACGCCAGGGACCCTGTG +
Preference number: 6 (lower is better)
Translates to: EDAASRRSQWRG*QEWSWDARDPV
Trigger: CACAGGGTCCCTGGCGTCCCAAGACCACTCCTGGCAGCCCCGCCACTGGCTGCGCCTGGAAGCCGCGTCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS CAA 72 bp GACCCCGGGCGGCTGCCGGTCCCAGTGCACCACCTGTaGAGCCTCCTCCACGTGCCGGTCGGTCCACACGTG +
Preference number: 6 (lower is better)
Translates to: DPGRLPVPVHHL*SLLHVPVGPHV
Trigger: CACGTGTGGACCGACCGGCACGTGGAGGAGGCTCAACAGGTGGTGCACTGGGACCGGCAGCCGCCCGGGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000477278.3
CDS GCA 72 bp CCTCCCAGCTCACCGCGGACTCGGACACCACGGAGCTaGCAGCAGCGGCGGGTACCGAGGACCCTGAGTGCA +
Preference number: 6 (lower is better)
Translates to: PPSSPRTRTPRS*QQRRVPRTLSA
Trigger: TGCACTCAGGGTCCTCGGTACCCGCCGCTGCTGGCAGCTCCGTGGTGTCCGAGTCCGCGGTGAGCTGGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000477278.3
CDS CAA 72 bp TCCCCGGTCCCCGCACCGCGGATGAGCAGCGAGAAGTaGCCGTCGTCGAAGGCCGAGGCCGAGAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SPVPAPRMSSEK*PSSKAEAESSR
Trigger: CCTGGAGCTCTCGGCCTCGGCCTTCGACGACGGCAACTTCTCGCTGCTCATCCGCGGTGCGGGGACCGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460473.1
CDS TCA 72 bp GCCCTCGTCGGCGACCTCCAGCGGCTCGATACGCAGTaGGAAGTCACCGCGCTCAAAGGCATCCGCGCCCAC +
Preference number: 6 (lower is better)
Translates to: ALVGDLQRLDTQ*EVTALKGIRAH
Trigger: GTGGGCGCGGATGCCTTTGAGCGCGGTGACTTCTCACTGCGTATCGAGCCGCTGGAGGTCGCCGACGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000476718.1
ENST00000477278.3
CDS CAA 72 bp TCCGTCTCCTCCACCGCGCGGATGAGCAGCGAGAAGTaGCCGTCGTCGAAGGCCGAGGCCGAGAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SVSSTARMSSEK*PSSKAEAESSR
Trigger: CCTGGAGCTCTCGGCCTCGGCCTTCGACGACGGCAACTTCTCGCTGCTCATCCGCGCGGTGGAGGAGACGGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309212.11
ENST00000445648.5
ENST00000464351.1
ENST00000477278.3
CDS CAA 72 bp TGGGCTCGGCTCTCGGGGACGATGACATTGATGACGTaGTGGCCGCGCGCCAGTGTGGGGTCTGGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: WARLSGTMTLMT*WPRASVGSGPG
Trigger: CCCAGGCCCAGACCCCACACTGGCGCGCGGCCACAACGTCATCAATGTCATCGTCCCCGAGAGCCGAGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000476718.1
ENST00000477278.3
CDS CAA 90 bp CCCAGCTGCTGGAAGAAGTGGGCTCGGCTCTCGGGGACGATGACATaGATGACGTTGTGGCCGCGCGCCAGTGTGGGGTCTGGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: PSCWKKWARLSGTMT*MTLWPRASVGSGPG
Trigger: CCCAGGCCCAGACCCCACACTGGCGCGCGGCCACAACGTCATCAATGTCATCGTCCCCGAGAGCCGAGCCCACTTCTTCCAGCAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000476718.1
ENST00000477278.3
CDS GCA 72 bp GGCCACAGTAATGGTGGTGCAGGTGGCAGGAGTAGGTaGCCTCGTCGGCGACCTCCAGCGGCTCGATACGCA +
Preference number: 6 (lower is better)
Translates to: GHSNGGAGGRSR*PRRRPPAARYA
Trigger: TGCGTATCGAGCCGCTGGAGGTCGCCGACGAGGGCACCTACTCCTGCCACCTGCACCACCATTACTGTGGCC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000476718.1
ENST00000477278.3
CDS GCA 72 bp CTGCTGGCCCAGCCAGGAGCCCAGGGCCTCCCTATTTaGAGTTCTCCTTCCGGAACCCTGGAAGCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: LLAQPGAQGLPI*SSPSGTLEAKG
Trigger: GCCCTTGGCTTCCAGGGTTCCGGAAGGAGAACTGCAAATAGGGAGGCCCTGGGCTCCTGGCTGGGCCAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473097.5
ENST00000478517.5
CDS GCA 72 bp GGACGGACCCAAGGAAGCAACCTCTGTGACAGCAAATaGCAGGCGAGGCCTGAGGACGCGGCTTCCAGGCGC +
Preference number: 6 (lower is better)
Translates to: GRTQGSNLCDSK*QARPEDAASRR
Trigger: GCGCCTGGAAGCCGCGTCCTCAGGCCTCGCCTGGCATTTGCTGTCACAGAGGTTGCTTCCTTGGGTCCGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS CCA 72 bp CTTCCGGAACCCTGGAAGCCAAGGGCGCCAACGGGTTaGCGGCTGTCCTCCACCCTCATCACAGTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: LPEPWKPRAPTG*RLSSTLITVGD
Trigger: GTCTCCCACTGTGATGAGGGTGGAGGACAGCCGCCAACCCGTTGGCGCCCTTGGCTTCCAGGGTTCCGGAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473097.5
ENST00000478517.5
CDS CAA 72 bp CCTTCCGGAACCCTGGAAGCCAAGGGCGCCAACGGGTaGGCGGCTGTCCTCCACCCTCATCACAGTGGGAGA +
Preference number: 6 (lower is better)
Translates to: PSGTLEAKGANG*AAVLHPHHSGR
Trigger: TCTCCCACTGTGATGAGGGTGGAGGACAGCCGCCAACCCGTTGGCGCCCTTGGCTTCCAGGGTTCCGGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473097.5
ENST00000478517.5
CDS GCA 72 bp GGCTCTCGTAGAGGTGGCAGTAGTGATGGTGCAGGTTaGAGGTGTACAGCCCCGCGTCCGTCTCCTCCACCG +
Preference number: 6 (lower is better)
Translates to: GSRRGGSSDGAG*RCTAPRPSPPP
Trigger: CGGTGGAGGAGACGGACGCGGGGCTGTACACCTGCAACCTGCACCATCACTACTGCCACCTCTACGAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000460473.1
ENST00000464351.1
ENST00000477278.3
CDS CCA 72 bp AGGGCCTCCCTATTTGCAGTTCTCCTTCCGGAACCCTaGAAGCCAAGGGCGCCAACGGGTTGGCGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: RASLFAVLLPEP*KPRAPTGWRLS
Trigger: GGACAGCCGCCAACCCGTTGGCGCCCTTGGCTTCCAGGGTTCCGGAAGGAGAACTGCAAATAGGGAGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473097.5
ENST00000478517.5
CDS CAA 72 bp TGGAAGAAGTGGGCTCGGCTCTCGGGGACGATGACATaGATGACGTTGTGGCCGCGCGCCAGTGTGGGGTCT +
Preference number: 6 (lower is better)
Translates to: WKKWARLSGTMT*MTLWPRASVGS
Trigger: AGACCCCACACTGGCGCGCGGCCACAACGTCATCAATGTCATCGTCCCCGAGAGCCGAGCCCACTTCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000445648.5
ENST00000476718.1
ENST00000477278.3
CDS GCA 72 bp CTGCTGGCCCAGCCAGGAGCCCAGGGCCTCCCTATTTaGAGTTCTCCTTCCGGAACCCTTTGTCTAGGTCGA +
Preference number: 6 (lower is better)
Translates to: LLAQPGAQGLPI*SSPSGTLCLGR
Trigger: TCGACCTAGACAAAGGGTTCCGGAAGGAGAACTGCAAATAGGGAGGCCCTGGGCTCCTGGCTGGGCCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309212.11
ENST00000342753.8
ENST00000474033.5
ENST00000476718.1
ENST00000477278.3
CDS TCA 72 bp GCAGAGCCTGTGGCCGCACAGCGGATCATCGATGGCTaGAGAGTCCCACTTCCTGTCGTTCAGAAGCGTTTG +
Preference number: 6 (lower is better)
Translates to: AEPVAAQRIIDG*RVPLPVVQKRL
Trigger: CAAACGCTTCTGAACGACAGGAAGTGGGACTCTTCAGCCATCGATGATCCGCTGTGCGGCCACAGGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477278.3
CDS CCA 72 bp AACAGCAGAGCCTGTGGCCGCACAGCGGATCATCGATaGCTGAAGAGTCCCACTTCCTGTCGTTCAGAAGCG +
Preference number: 6 (lower is better)
Translates to: NSRACGRTADHR*LKSPTSCRSEA
Trigger: CGCTTCTGAACGACAGGAAGTGGGACTCTTCAGCCATCGATGATCCGCTGTGCGGCCACAGGCTCTGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477278.3