RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MXRA7 (Homo sapiens)

Ensembl gene IDs: ENSG00000182534

Ensembl transcript IDs: ENST00000355797.7, ENST00000375036.6, ENST00000589082.1, ENST00000592148.1

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGCCTGGGCGGTGGACACCCACCACCGAGGAAGAGGAGGATGCTaGGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTC +
Preference number: 1 (lower is better)
Translates to: GAWAVDTHHRGRGGC*ALQTLASECPPSPV
Trigger: GACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCATCCTCCTCTTCCTCGGTGGTGGGTGTCCACCGCCCAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 90 bp GGGATGCTGGGCCCAGCCCCAGGCTCCAGGGGTCTAGGCCAATCATaGTGGTCCCATGTCCTTGCCCATGATTGGTTGAAACATGGGCAC +
Preference number: 1 (lower is better)
Translates to: GMLGPAPGSRGLGQS*WSHVLAHDWLKHGH
Trigger: GTGCCCATGTTTCAACCAATCATGGGCAAGGACATGGGACCAGCATGATTGGCCTAGACCCCTGGAGCCTGGGGCTGGGCCCAGCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp AGTGTTTCCATGAAGTGTCCAAGGCCAGGGGTGGGGCCTGGGCGGTaGACACCCACCACCGAGGAAGAGGAGGATGCTGAGCACTTCAGA +
Preference number: 1 (lower is better)
Translates to: SVSMKCPRPGVGPGR*TPTTEEEEDAEHFR
Trigger: TCTGAAGTGCTCAGCATCCTCCTCTTCCTCGGTGGTGGGTGTCCACCGCCCAGGCCCCACCCCTGGCCTTGGACACTTCATGGAAACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp ATGCTGGGCCCAGCCCCAGGCTCCAGGGGTCTAGGCCAATCATGCTaGTCCCATGTCCTTGCCCATGATTGGTTGAAACATGGGCACGTG +
Preference number: 1 (lower is better)
Translates to: MLGPAPGSRGLGQSC*SHVLAHDWLKHGHV
Trigger: CACGTGCCCATGTTTCAACCAATCATGGGCAAGGACATGGGACCAGCATGATTGGCCTAGACCCCTGGAGCCTGGGGCTGGGCCCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 90 bp TGGATGACTGTGGGCCTCCACCAGGCGCAGGTGACCCTGCAGATATaGTTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATT +
Preference number: 1 (lower is better)
Translates to: WMTVGLHQAQVTLQI*FRGSLSLLFISSLI
Trigger: AATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATCTGCAGGGTCACCTGCGCCTGGTGGAGGCCCACAGTCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp AGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGTTTGGAGGTaGGCTGCCCCCAGAACAGGATGTAATCTTGGGCAAGGCAGCTGC +
Preference number: 1 (lower is better)
Translates to: REGRPLYPTSDLVWR*AAPRTGCNLGQGSC
Trigger: GCAGCTGCCTTGCCCAAGATTACATCCTGTTCTGGGGGCAGCCCACCTCCAAACCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 90 bp GAAAGGAGAGGGAGAAGAAAGTGGGCAATGGAAACACAGGAGCTTTaGAGTGCAGCCTTGGGAGGGATAAGGGCACCTACGGGTTTGCCC +
Preference number: 1 (lower is better)
Translates to: ERRGRRKWAMETQEL*SAALGGIRAPTGLP
Trigger: GGGCAAACCCGTAGGTGCCCTTATCCCTCCCAAGGCTGCACTGCAAAGCTCCTGTGTTTCCATTGCCCACTTTCTTCTCCCTCTCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp CGAGTGCCCACCAAGCCCTGTCCTGGACCTCATAGGAAACCCAACTaGAACAGGTGTCTCCCCAACACCCATGCTCCCTTTTATCACAGA +
Preference number: 1 (lower is better)
Translates to: RVPTKPCPGPHRKPN*NRCLPNTHAPFYHR
Trigger: TCTGTGATAAAAGGGAGCATGGGTGTTGGGGAGACACCTGTTCCAGTTGGGTTTCCTATGAGGTCCAGGACAGGGCTTGGTGGGCACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 90 bp GCTTTCAGAAATCATGGTCTGCCTGGACCTAGCCAGGCTCACTGTTaGAGTCTTGTTGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCC +
Preference number: 1 (lower is better)
Translates to: AFRNHGLPGPSQAHC*SLVVCSSFQAQRAA
Trigger: GGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACAACAAGACTTCAACAGTGAGCCTGGCTAGGTCCAGGCAGACCATGATTTCTGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 90 bp GACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCTaGCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACT +
Preference number: 1 (lower is better)
Translates to: DVSLGTLELEWSIST*LLAERAGLCTPLVT
Trigger: AGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp GCCGCTCTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATaGTCCATCAGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGT +
Preference number: 1 (lower is better)
Translates to: AALQKDVSLGTLELE*SISTCLLAERAGLC
Trigger: ACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAGAGCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp GTAAAAAGAATCTGTGGCAGTAGGAATCTGCCAGGCTTCCTGTTCTaGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTGGG +
Preference number: 1 (lower is better)
Translates to: VKRICGSRNLPGFLF*NPALDPERHVWLGG
Trigger: CCCACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCCTGGCAGATTCCTACTGCCACAGATTCTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 90 bp TTGAGACTGGTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATaGTTTAGGTTCTCTCAACCCCCACACCCAGAGAGAGTTCCATTG +
Preference number: 1 (lower is better)
Translates to: LRLVPIAGKRLCAAE*FRFSQPPHPERVPL
Trigger: CAATGGAACTCTCTCTGGGTGTGGGGGTTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAACCAGTCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp TGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTaGGCTTTCTATCAGGCTCTAAGTACAGGCAGGTCCTTAGGACAA +
Preference number: 1 (lower is better)
Translates to: CALPSRPRELPSRST*AFYQALSTGRSLGQ
Trigger: TTGTCCTAAGGACCTGCCTGTACTTAGAGCCTGATAGAAAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTaGCTGGGTGGGCCTCAAGTTACTTATAATTGGTGGCCATGCTAT +
Preference number: 1 (lower is better)
Translates to: GFLFWNPALDPERHV*LGGPQVTYNWWPCY
Trigger: ATAGCATGGCCACCAATTATAAGTAACTTGAGGCCCACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 90 bp GTATCCAGATGGAGGTACAGTGGACGCTTTGAGGGAAGGAGGCCCTaGAACGTCTCTAGCAAGCAGGCTTTGGTAAACAGAACTGCAGAT +
Preference number: 1 (lower is better)
Translates to: VSRWRYSGRFEGRRP*NVSSKQALVNRTAD
Trigger: ATCTGCAGTTCTGTTTACCAAAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGTACCTCCATCTGGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 90 bp TGGCACTGTATGAATTTGCAAGACTGGAAACCATGCAGATGTCCATaGGAGGGGGAGTGGCTGAGTAAACTGGTACATCCGGGCTGGTAC +
Preference number: 1 (lower is better)
Translates to: WHCMNLQDWKPCRCP*EGEWLSKLVHPGWY
Trigger: GTACCAGCCCGGATGTACCAGTTTACTCAGCCACTCCCCCTCTCATGGACATCTGCATGGTTTCCAGTCTTGCAAATTCATACAGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 90 bp CATGTTTGGCTGGGTGGGCCTCAAGTTACTTATAATTGGTGGCCATaGTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCA +
Preference number: 1 (lower is better)
Translates to: HVWLGGPQVTYNWWP*YSLSEGFLVPCRSP
Trigger: TGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCATGGCCACCAATTATAAGTAACTTGAGGCCCACCCAGCCAAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp CAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGTaGACTATACTGTTGCTTTCAGAAATCATGGTCTGCCTGGACCTA +
Preference number: 1 (lower is better)
Translates to: QRQPLAAVHQQPDSM*TILLLSEIMVCLDL
Trigger: TAGGTCCAGGCAGACCATGATTTCTGAAAGCAACAGTATAGTCCACATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp GAAAGGCATGTTTGGCTGGGTGGGCCTCAAGTTACTTATAATTGGTaGCCATGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGC +
Preference number: 1 (lower is better)
Translates to: ERHVWLGGPQVTYNW*PCYSLSEGFLVPCR
Trigger: GCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCATGGCCACCAATTATAAGTAACTTGAGGCCCACCCAGCCAAACATGCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp CCGGAAAGGCATGTTTGGCTGGGTGGGCCTCAAGTTACTTATAATTaGTGGCCATGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGC +
Preference number: 1 (lower is better)
Translates to: PERHVWLGGPQVTYN*WPCYSLSEGFLVPC
Trigger: GCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCATGGCCACCAATTATAAGTAACTTGAGGCCCACCCAGCCAAACATGCCTTTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 90 bp GCTCTTAGGTTCTTGGTGGCAGTGACATACATACTGGTGATTCTCTaGCATGGCTGCCAGGTAGACATCTTTCTCTCGGTGTTTGCGCTC +
Preference number: 1 (lower is better)
Translates to: ALRFLVAVTYILVIL*HGCQVDIFLSVFAL
Trigger: GAGCGCAAACACCGAGAGAAAGATGTCTACCTGGCAGCCATGTCAGAGAATCACCAGTATGTATGTCACTGCCACCAAGAACCTAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 90 bp TGGGTGGGCCTCAAGTTACTTATAATTGGTGGCCATGCTATAGCCTaGGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTC +
Preference number: 1 (lower is better)
Translates to: WVGLKLLIIGGHAIA*VKDFWYPAALQKDV
Trigger: GACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCATGGCCACCAATTATAAGTAACTTGAGGCCCACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 90 bp AATTGGTGGCCATGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTaGCGCTCTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGA +
Preference number: 1 (lower is better)
Translates to: NWWPCYSLSEGFLVP*RSPKRRLFGNSRTG
Trigger: TCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCATGGCCACCAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 90 bp CCTGATTCCATGTGGACTATACTGTTGCTTTCAGAAATCATGGTCTaGCTGGACCTAGCCAGGCTCACTGTTGAAGTCTTGTTGTGTGCT +
Preference number: 1 (lower is better)
Translates to: PDSMWTILLLSEIMV*LDLARLTVEVLLCA
Trigger: AGCACACAACAAGACTTCAACAGTGAGCCTGGCTAGGTCCAGGCAGACCATGATTTCTGAAAGCAACAGTATAGTCCACATGGAATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp TTGCTCAAGAACTGTGAATTGTCCTGCCAGTGGGGTGATCAGAAATaGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATTGTATG +
Preference number: 1 (lower is better)
Translates to: LLKNCELSCQWGDQK*DLHGMRTSYPHHCM
Trigger: CATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCAGGACAATTCACAGTTCTTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 90 bp AATTGTCCTGCCAGTGGGGTGATCAGAAATGGGACCTGCATGGTATaGGGACCAGTTATCCCCATCATTGTATGTTCACTCACAAAGACA +
Preference number: 1 (lower is better)
Translates to: NCPASGVIRNGTCMV*GPVIPIIVCSLTKT
Trigger: TGTCTTTGTGAGTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCAGGACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 90 bp TTTGCCCTGCCCACCGATGTGCATTTAGGGGACAGAGACATTAGCTaGGGTAAGGGGTCCCTAAGACCTGAGACAGAACAAATAATTTTT +
Preference number: 1 (lower is better)
Translates to: FALPTDVHLGDRDIS*GKGSLRPETEQIIF
Trigger: AAAAATTATTTGTTCTGTCTCAGGTCTTAGGGACCCCTTACCTCAGCTAATGTCTCTGTCCCCTAAATGCACATCGGTGGGCAGGGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 90 bp AGATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTaGTTCCATGTGGACTATACTGTTGCTTTCAGAAATCATGGTCTG +
Preference number: 1 (lower is better)
Translates to: RYDSEAASRCCSSAA*FHVDYTVAFRNHGL
Trigger: CAGACCATGATTTCTGAAAGCAACAGTATAGTCCACATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 90 bp CAGGTAGACATCTTTCTCTCGGTGTTTGCGCTCTTTCTCCCACACTaGTGTTTCTTTCTGCCCTCCTTTATGCTTTTTAGCTTAGATTTG +
Preference number: 1 (lower is better)
Translates to: QVDIFLSVFALFLPH*CFFLPSFMLFSLDL
Trigger: CAAATCTAAGCTAAAAAGCATAAAGGAGGGCAGAAAGAAACAGCAGTGTGGGAGAAAGAGCGCAAACACCGAGAGAAAGATGTCTACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 90 bp AACAATCCCCTCCGGTGTCACAGGCACTGTTCTGTAAGATCACTTTaGCATTTTATTGAATACTTTCTGGTGAGGTTCTCTTTCCCTGCA +
Preference number: 1 (lower is better)
Translates to: NNPLRCHRHCSVRSL*HFIEYFLVRFSFPA
Trigger: TGCAGGGAAAGAGAACCTCACCAGAAAGTATTCAATAAAATGCCAAAGTGATCTTACAGAACAGTGCCTGTGACACCGGAGGGGATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 90 bp TATACACACTGCAAGAACTCGGCAAGTACCTATAGAATGTACGCCTaGATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGA +
Preference number: 1 (lower is better)
Translates to: YTHCKNSASTYRMYA*IYVYKGKLGLQKSG
Trigger: TCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGCGTACATTCTATAGGTACTTGCCGAGTTCTTGCAGTGTGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGAAGTGCAGTGGCGCGATaGCTCACTGGAACCTCCGCC +
Preference number: 2 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGSAVAR*LTGTSA
Trigger: GGCGGAGGTTCCAGTGAGCCATCGCGCCACTGCACT...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTGTGGGGCCTGGGCGGTaGACACCCACCACCGAGGAA +
Preference number: 2 (lower is better)
Translates to: TVDALREGGPETSLASRLVGPGR*TPTTEE
Trigger: TTCCTCGGTGGTGGGTGTCCACCGCCCAGGCCCCAC...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTGTCCAAGGCCAGGGGTaGGGCCTGGGCGGTGGACAC +
Preference number: 2 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRVQGQG*GLGGGH
Trigger: GTGTCCACCGCCCAGGCCCCACCCCTGGCCTTGGAC...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp GATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGGGTGGGCGGATCACCTaGGGTCAGGAGTTCGAGACG +
Preference number: 2 (lower is better)
Translates to: DMIQRQPLAAVHQQPDSMGGRIT*GQEFET
Trigger: CGTCTCGAACTCCTGACCTCAGGTGATCCGCCCACC...CATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGAGGTCAAGGCTGCAGTaGGTCATGATGGCACCACTG +
Preference number: 2 (lower is better)
Translates to: STCLLAERAGLCTPLVTWRSRLQ*VMMAPL
Trigger: CAGTGGTGCCATCATGACTCACTGCAGCCTTGACCT...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTCCCAGTTACTCAGGCTaGGAGGAGGATTTTGTGCGC +
Preference number: 2 (lower is better)
Translates to: GFLFWNPALDPERHVWLGPSYSG*EEDFVR
Trigger: GCGCACAAAATCCTCCTCTCAGCCTGAGTAACTGGG...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR GCA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGAACAGGAGCTTTGCAGTaGAGCCTTGGGAGGGATAAG +
Preference number: 2 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGTGALQ*SLGRDK
Trigger: CTTATCCCTCCCAAGGCTGCACTGCAAAGCTCCTGT...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR GCA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTGGAAACCTCCTCATCTaGCACCTCTCCTGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: GFLFWNPALDPERHVWLGGNLLI*HLSCSE
Trigger: CTCACTGCAGGAGAGGTGGCAGATGAGGAGGTTTCC...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 90 bp GCCCATGATTGGTTGAAACATGGGCACGTGCCATATTCTGGCCAATaGGGATCTGAAGGGATGTGGGGCGGGGACATCTGGACCAGTTCC +
Preference number: 2 (lower is better)
Translates to: AHDWLKHGHVPYSGQ*GSEGMWGGDIWTSS
Trigger: GGAACTGGTCCAGATGTCCCCGCCCCACATCCCTTCAGATCCCAATTGGCCAGAATATGGCACGTGCCCATGTTTCAACCAATCATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTAGGTGGAGGTTGCAGTaGGCCAAGATCACGCCACTG +
Preference number: 2 (lower is better)
Translates to: RRREVNLMMVSMRHGNATRWRLQ*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACTGCAACCTCCACCT...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTGGGACCTGCATGGTATaGGGACCAGTTATCCCCATC +
Preference number: 2 (lower is better)
Translates to: TVDALREGGPETSLASRLGTCMV*GPVIPI
Trigger: GATGGGGATAACTGGTCCTCATACCATGCAGGTCCC...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGAGACAGAGACATTAGCTaGGGTAAGGGGTCCCTAAGA +
Preference number: 2 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGDRDIS*GKGSLR
Trigger: TCTTAGGGACCCCTTACCTCAGCTAATGTCTCTGTC...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTGGAAGAGGAGGATGCTaGGCACTTCAGACACTGGCT +
Preference number: 2 (lower is better)
Translates to: TVDALREGGPETSLASRLGRGGC*ALQTLA
Trigger: AGCCAGTGTCTGAAGTGCTCAGCATCCTCCTCTTCC...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGCCACCTCTCCTGCAGTaGGAAGTAGAGACTAGACGT +
Preference number: 2 (lower is better)
Translates to: STCLLAERAGLCTPLVTWPPLLQ*EVETRR
Trigger: ACGTCTAGTCTCTACTTCTCACTGCAGGAGAGGTGG...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR GCA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTGAGAGGAGGATTTTGTaGGCCTGGGAGGTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLERRIL*AWEVKA
Trigger: AGCCTTGACCTCCCAGGCGCACAAAATCCTCCTCTC...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR GCA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTGAAACACAGGAGCTTTaGAGTGCAGCCTTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLETQEL*SAALGG
Trigger: CCCTCCCAAGGCTGCACTGCAAAGCTCCTGTGTTTC...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTGAGCACTTCAGACACTaGCTTCCGAGTGCCCACCAA +
Preference number: 2 (lower is better)
Translates to: TVDALREGGPETSLASRLEHFRH*LPSAHQ
Trigger: TTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTC...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTACTGGTTCCCATCGCTaGAAAGAGGCTCTGTGCAGC +
Preference number: 2 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLTGSHR*KEALCS
Trigger: GCTGCACAGAGCCTCTTTCCAGCGATGGGAACCAGT...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 90 bp AGAAAGGAGAGGGAGAAGAAAGTGGGCAATGGAAACACAGGAGCTTaGCAGTGCAGCCTTGGGAGGGATAAGGGCACCTACGGGTTTGCC +
Preference number: 2 (lower is better)
Translates to: RKEREKKVGNGNTGA*QCSLGRDKGTYGFA
Trigger: GGCAAACCCGTAGGTGCCCTTATCCCTCCCAAGGCTGCACTGCAAAGCTCCTGTGTTTCCATTGCCCACTTTCTTCTCCCTCTCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 90 bp ATCATGGTCTGCCTGGACCTAGCCAGGCTCACTGTTGAAGTCTTGTaGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCA +
Preference number: 2 (lower is better)
Translates to: IMVCLDLARLTVEVL*CALPSRPRELPSRS
Trigger: TGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACAACAAGACTTCAACAGTGAGCCTGGCTAGGTCCAGGCAGACCATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 90 bp GAAATCATGGTCTGCCTGGACCTAGCCAGGCTCACTGTTGAAGTCTaGTTGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGA +
Preference number: 2 (lower is better)
Translates to: EIMVCLDLARLTVEV*LCALPSRPRELPSR
Trigger: TCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACAACAAGACTTCAACAGTGAGCCTGGCTAGGTCCAGGCAGACCATGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTCGAGCCTGGCCAGCATaGCAAAACGCTGTCTCTACT +
Preference number: 2 (lower is better)
Translates to: RRREVNLMMVSMRHGNATRAWPA*QNAVST
Trigger: AGTAGAGACAGCGTTTTGCCATGCTGGCCAGGCTCG...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTTGGGGTGATCAGAAATaGGACCTGCATGGTATGAGG +
Preference number: 2 (lower is better)
Translates to: GFLFWNPALDPERHVWLGWGDQK*DLHGMR
Trigger: CCTCATACCATGCAGGTCCCATTTCTGATCACCCCA...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGACATATTCTGGCCAATTaGGATCTGAAGGGATGTGGG +
Preference number: 2 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGHILAN*DLKGCG
Trigger: CCCACATCCCTTCAGATCCCAATTGGCCAGAATATG...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp CTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCGTAGGCAGGCCAGCCTaGGGCAGGGTTCTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: LQKDVSLGTLELEWSISTVGRPA*GRVLSS
Trigger: ACTGCTGAGAACCCTGCCCCAGGCTGGCCTGCCTAC...GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGCTGGTCTTGAACTCCTaGCCTCAAGTGAACAGAGAA +
Preference number: 2 (lower is better)
Translates to: STCLLAERAGLCTPLVTWLVLNS*PQVNRE
Trigger: TTCTCTGTTCACTTGAGGTCAGGAGTTCAAGACCAG...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp GAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATTGTATGTTCACGGACAGCATCAGGCATaGCCGCTGTGCATCCCGTGG +
Preference number: 2 (lower is better)
Translates to: EMGPAWYEDQLSPSLYVHGQHQA*PLCIPW
Trigger: CCACGGGATGCACAGCGGCCATGCCTGATGCTGTCC...GTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp CTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCCAGCTGCTGTCAGGCTaGGCACAACCTCCCCCTCAA +
Preference number: 2 (lower is better)
Translates to: LQKDVSLGTLELEWSISTQLLSG*AQPPPQ
Trigger: TTGAGGGGGAGGTTGTGCCCAGCCTGACAGCAGCTG...GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTGGAACCTCCGCCTTCTaGGTTCAAGCGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRGTSAF*VQAILL
Trigger: CAGGAGAATCGCTTGAACTCAGAAGGCGGAGGTTCC...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTTCCACCAGGCGCAGGTaGCCCTGCAGATATGATTCA +
Preference number: 2 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRSTRRR*PCRYDS
Trigger: TGAATCATATCTGCAGGGTCACCTGCGCCTGGTGGA...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR GCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGGACATGCCCTTTTCTTaGTTCTGGATGAGATACCTG +
Preference number: 2 (lower is better)
Translates to: STCLLAERAGLCTPLVTWDMPFS*FWMRYL
Trigger: CAGGTATCTCATCCAGAAGCAAGAAAAGGGCATGTC...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR GCA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTCTCTGTGCAGCTGAATaGTTTAGGTTCTCTCAACCC +
Preference number: 2 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLLCAAE*FRFSQP
Trigger: GGGTTGAGAGAACCTAAAGCATTCAGCTGCACAGAG...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATGAAAGAACAAGGGCATaGGGCAAGGGTGGGGACAGC +
Preference number: 2 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDERTRA*GKGGDS
Trigger: GCTGTCCCCACCCTTGCCCCATGCCCTTGTTCTTTC...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTAGGCCTCTAACCTGCTaGAAGATAGGGACCAAGTTG +
Preference number: 2 (lower is better)
Translates to: RRREVNLMMVSMRHGNATRPLTC*KIGTKL
Trigger: CAACTTGGTCCCTATCTTCCAGCAGGTTAGAGGCCT...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTGAAATGGGACCTGCATaGTATGAGGACCAGTTATCC +
Preference number: 2 (lower is better)
Translates to: TVDALREGGPETSLASRLEMGPA*YEDQLS
Trigger: GGATAACTGGTCCTCATACCATGCAGGTCCCATTTC...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTATCACAGATCCCCAGTaGAATTCAGTTACCTTCTCC +
Preference number: 2 (lower is better)
Translates to: TVDALREGGPETSLASRLITDPQ*NSVTFS
Trigger: GGAGAAGGTAACTGAATTTCACTGGGGATCTGTGAT...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTGCAGATACTGATGAGTaGCAGTCCACTGCTATTTGT +
Preference number: 2 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLADTDE*QSTAIC
Trigger: ACAAATAGCAGTGGACTGTCACTCATCAGTATCTGC...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp CTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCAGGATTTTGTGCGCCTaGGAGGTCAAGGCTGCAGTG +
Preference number: 2 (lower is better)
Translates to: LQKDVSLGTLELEWSISTRILCA*EVKAAV
Trigger: CACTGCAGCCTTGACCTCCCAGGCGCACAAAATCCT...GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTGGTGAGCATGAGGCATaGAAATGCCACTGCTCCACT +
Preference number: 2 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRGEHEA*KCHCST
Trigger: AGTGGAGCAGTGGCATTTCCATGCCTCATGCTCACC...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTGAGCTCCGACCATTCTaGGCCTGGAGTTGTTCTAAC +
Preference number: 2 (lower is better)
Translates to: TSSLTPRDASKTCPFLASELRPF*AWSCSN
Trigger: GTTAGAACAACTCCAGGCCCAGAATGGTCGGAGCTC...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTTTTCTTCAGGGTCATTaGAAAAGGTGGTTACCGTCA +
Preference number: 2 (lower is better)
Translates to: GFLFWNPALDPERHVWLGFLQGH*KRWLPS
Trigger: TGACGGTAACCACCTTTTCCAATGACCCTGAAGAAA...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 90 bp GTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTCTCTTaGGGAACTCTAGAACTGGAATGGTCCATCAGCACCTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: VKDFWYPAALQKDVS*GTLELEWSISTCLL
Trigger: CAAAAGGCAGGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTATACTGGTGATTCTCTaGCATGGCTGCCAGGTAGAC +
Preference number: 2 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRILVIL*HGCQVD
Trigger: GTCTACCTGGCAGCCATGTCAGAGAATCACCAGTAT...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR GCA 90 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATGCTTTAGGTTCTCTCAAGAGGTTCTCTTTCCCTaGACACAGGCTTTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: VPIAGKRLCAAECFRFSQEVLFP*TQAFLP
Trigger: GGGAAGAAAAGCCTGTGTGCAGGGAAAGAGAACCTC...TTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGAAGTGAGAGAAATTCTTaGCAGATCTTACCTCTAGTA +
Preference number: 2 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGSERNS*QILPLV
Trigger: TACTAGAGGTAAGATCTGCCAAGAATTTCTCTCACT...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTTTCTGTAGGCCTCTGTaGCTCTTAGGTTCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRFCRPL*LLGSWW
Trigger: CCACCAAGAACCTAAGAGCCACAGAGGCCTACAGAA...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATCAGTACGAGGAAGACTaGGCTAAGAGAACTGCAGCT +
Preference number: 2 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDQYEED*AKRTAA
Trigger: AGCTGCAGTTCTCTTAGCTCAGTCTTCCTCGTACTG...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp GATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGGAGAACAATCTCAGATaGGGTAGCAGAAATGGTGTC +
Preference number: 2 (lower is better)
Translates to: DMIQRQPLAAVHQQPDSMENNLR*GSRNGV
Trigger: GACACCATTTCTGCTACCTCATCTGAGATTGTTCTC...CATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp CTTCAGTTTACTTTTCCCAATGCCATCAGGATTTTGACTCAAGTACACGAGTCAAAGAACGCTCCCAGCTaGGCATGGTGGCTCACGCCT +
Preference number: 2 (lower is better)
Translates to: LQFTFPNAIRILTQVHESKNAPS*AWWLTP
Trigger: AGGCGTGAGCCACCATGCCCAGCTGGGAGCGTTCTT...TGACTCGTGTACTTGAGTCAAAATCCTGATGGCATTGGGAAAAGTAAACTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATGAATTGTCCTGCCAGTaGGGTGATCAGAAATGGGAC +
Preference number: 2 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDELSCQ*GDQKWD
Trigger: GTCCCATTTCTGATCACCCCACTGGCAGGACAATTC...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 90 bp TCAGAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATaGTATGTTCACTCACAAAGACAGAACAATCCCCTCCGGTGTCAC +
Preference number: 2 (lower is better)
Translates to: SEMGPAWYEDQLSPS*YVHSQRQNNPLRCH
Trigger: GTGACACCGGAGGGGATTGTTCTGTCTTTGTGAGTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 90 bp GGAGTTGTTCTAACTCTTGGCTTCTCACGTGAGAGAGCCCTGTTCTaGTTTAAGCCAGTTGAGCTGGAGTTTTCTGTCGTTGCAGTCAGA +
Preference number: 2 (lower is better)
Translates to: GVVLTLGFSRERALF*FKPVELEFSVVAVR
Trigger: TCTGACTGCAACGACAGAAAACTCCAGCTCAACTGGCTTAAACAAGAACAGGGCTCTCTCACGTGAGAAGCCAAGAGTTAGAACAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTTGCCAGGATGGAAGGTaGGTCTCTGAATTAGACTTT +
Preference number: 2 (lower is better)
Translates to: TSSLTPRDASKTCPFLASCQDGR*VSELDF
Trigger: AAAGTCTAATTCAGAGACTCACCTTCCATCCTGGCA...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTTTGAATACTTTCTGGTaGGGTTCTCTTTCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: TSSLTPRDASKTCPFLASLNTFW*GSLSLH
Trigger: GTGCAGGGAAAGAGAACCTCACCAGAAAGTATTCAA...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp AGAGGGGTACTGGGAGTTGATAGAAAATTTGTCCTCAGTTGTAGGTTACTCTTAGTACAGTGGACGCTTTaGGGGAAGGAGGCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: RGVLGVDRKFVLSCRLLLVQWTL*GKEALK
Trigger: TTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGTAC...TAAGAGTAACCTACAACTGAGGACAAATTTTCTATCAACTCCCAGTACCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATTTAAGCCAGTTGAGCTaGAGTTTTCTGTCGTTGCAG +
Preference number: 2 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDLSQLS*SFLSLQ
Trigger: CTGCAACGACAGAAAACTCCAGCTCAACTGGCTTAA...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATGCTTTAGGTTCTCTCAATGGAAGGTGAGTCTCTaGATTAGACTTTTTGCTGAA +
Preference number: 2 (lower is better)
Translates to: VPIAGKRLCAAECFRFSQWKVSL*IRLFAE
Trigger: TTCAGCAAAAAGTCTAATTCAGAGACTCACCTTCCA...TTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR GCA 90 bp GATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGACTGCTGTTTCTTTCTaGCCTCCTTTATGCTTTTTA +
Preference number: 2 (lower is better)
Translates to: DMIQRQPLAAVHQQPDSMTAVSF*PPLCFL
Trigger: TAAAAAGCATAAAGGAGGGCAGAAAGAAACAGCAGT...CATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CCA 90 bp AGAGGGGTACTGGGAGTTGATAGAAAATTTGTCCTCAGTTGTAGGTTACTCTTAGAGCCCAATAACAGCTaGAACCTCACCAGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: RGVLGVDRKFVLSCRLLLEPNNS*NLTSKQ
Trigger: CTGCTTGCTGGTGAGGTTCCAGCTGTTATTGGGCTC...TAAGAGTAACCTACAACTGAGGACAAATTTTCTATCAACTCCCAGTACCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR GCA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTATATTTCTAAGAACTTaGATAGGTTCTGTCGTTAGC +
Preference number: 2 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRIFLRT*IGSVVS
Trigger: GCTAACGACAGAACCTATGCAAGTTCTTAGAAATAT...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR GCA 90 bp CTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCTATAGAATGTACGCCTaGATCTATGTTTATAAGGGA +
Preference number: 2 (lower is better)
Translates to: LQKDVSLGTLELEWSISTYRMYA*IYVYKG
Trigger: TCCCTTATAAACATAGATGCAGGCGTACATTCTATA...GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR TCA 90 bp CTTCAGTTTACTTTTCCCAATGCCATCAGGATTTTGACTCAAGTACACGAGTCAAACAGACACAGAGAGTaGATGGTCAGCAAGAAACAA +
Preference number: 2 (lower is better)
Translates to: LQFTFPNAIRILTQVHESNRHRE*MVSKKQ
Trigger: TTGTTTCTTGCTGACCATTCACTCTCTGTGTCTGTT...TGACTCGTGTACTTGAGTCAAAATCCTGATGGCATTGGGAAAAGTAAACTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 90 bp GTACAAAAATTCCTTCAGTTTACTTTTCCCAATGCCATCAGGATTTaGACTCAAGTACACGAGTCATTCCTGTTTGGTATAATCAGAAAA +
Preference number: 2 (lower is better)
Translates to: VQKFLQFTFPNAIRI*TQVHESFLFGIIRK
Trigger: TTTTCTGATTATACCAAACAGGAATGACTCGTGTACTTGAGTCAAAATCCTGATGGCATTGGGAAAAGTAAACTGAAGGAATTTTTGTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp GCGGTGGACACCCACCACCGAGGAAGAGGAGGATGCTaGGCACTTCAGACACTGGCTTCCGAGTGCCCACCA +
Preference number: 3 (lower is better)
Translates to: AVDTHHRGRGGC*ALQTLASECPP
Trigger: TGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCATCCTCCTCTTCCTCGGTGGTGGGTGTCCACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp GTGGGCCTCCACCAGGCGCAGGTGACCCTGCAGATATaGTTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGC +
Preference number: 3 (lower is better)
Translates to: VGLHQAQVTLQI*FRGSLSLLFIS
Trigger: GCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATCTGCAGGGTCACCTGCGCCTGGTGGAGGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 72 bp GCCCCCAGAACAGGATGTAATCTTGGGCAAGGCAGCTaGTGTCAGGCTGGGCACAACCTCCCCCTCAAGGCT +
Preference number: 3 (lower is better)
Translates to: APRTGCNLGQGS*CQAGHNLPLKA
Trigger: AGCCTTGAGGGGGAGGTTGTGCCCAGCCTGACAGCAGCTGCCTTGCCCAAGATTACATCCTGTTCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp GTCCACTGCTATTTGTGTCATGTAGGCAGGCCAGCCTaGGGCAGGGTTCTCAGCAGTGATGGAGGGCAGGGG +
Preference number: 3 (lower is better)
Translates to: VHCYLCHVGRPA*GRVLSSDGGQG
Trigger: CCCCTGCCCTCCATCACTGCTGAGAACCCTGCCCCAGGCTGGCCTGCCTACATGACACAAATAGCAGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 72 bp GGCCCAGCCCCAGGCTCCAGGGGTCTAGGCCAATCATaGTGGTCCCATGTCCTTGCCCATGATTGGTTGAAA +
Preference number: 3 (lower is better)
Translates to: GPAPGSRGLGQS*WSHVLAHDWLK
Trigger: TTTCAACCAATCATGGGCAAGGACATGGGACCAGCATGATTGGCCTAGACCCCTGGAGCCTGGGGCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp GCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTaGTTTGGAGGTGGGCTGCCCCCAGAACAGGATGTA +
Preference number: 3 (lower is better)
Translates to: AERAGLCTPLVT*FGGGLPPEQDV
Trigger: TACATCCTGTTCTGGGGGCAGCCCACCTCCAAACCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGAAGGCAGGAGAATCACTaGAACCCAGAAGGTGAAGGG +
Preference number: 3 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGRQENH*NPEGEG
Trigger: CCCTTCACCTTCTGGGTTCAAGTGATTCTCCTGCCT...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATGCTTTAGGTTCTCTCAAAGGGCACCTACGGGTTaGCCCTGCCCACCGATGTGC +
Preference number: 3 (lower is better)
Translates to: VPIAGKRLCAAECFRFSQRAPTG*PCPPMC
Trigger: GCACATCGGTGGGCAGGGCAAACCCGTAGGTGCCCT...TTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTGGAAACACAGGAGCTTaGCAGTGCAGCCTTGGGAGG +
Preference number: 3 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLGNTGA*QCSLGR
Trigger: CCTCCCAAGGCTGCACTGCAAAGCTCCTGTGTTTCC...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp CAATTGGGATCTGAAGGGATGTGGGGCGGGGACATCTaGACCAGTTCCCTTACGCCTAGAGACGCAAGCAAG +
Preference number: 3 (lower is better)
Translates to: QLGSEGMWGGDI*TSSLTPRDASK
Trigger: CTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGTCCAGATGTCCCCGCCCCACATCCCTTCAGATCCCAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp CCAGCCCCAGGCTCCAGGGGTCTAGGCCAATCATGCTaGTCCCATGTCCTTGCCCATGATTGGTTGAAACAT +
Preference number: 3 (lower is better)
Translates to: PAPGSRGLGQSC*SHVLAHDWLKH
Trigger: ATGTTTCAACCAATCATGGGCAAGGACATGGGACCAGCATGATTGGCCTAGACCCCTGGAGCCTGGGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp GTCCAGGAAGTGGGGAGCCAGCTAATTGTATCCAGATaGAGGTACAGTGGACGCTTTGAGGGAAGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: VQEVGSQLIVSR*RYSGRFEGRRP
Trigger: GGGCCTCCTTCCCTCAAAGCGTCCACTGTACCTCCATCTGGATACAATTAGCTGGCTCCCCACTTCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp GTAGTGGTACACACCTGTAGTCCCAGTTACTCAGGCTaGGAGGAGGATTTTGTGCGCCTGGGAGGTCAAGGC +
Preference number: 3 (lower is better)
Translates to: VVVHTCSPSYSG*EEDFVRLGGQG
Trigger: GCCTTGACCTCCCAGGCGCACAAAATCCTCCTCTCAGCCTGAGTAACTGGGACTACAGGTGTGTACCACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 72 bp GGGAGAAGAAAGTGGGCAATGGAAACACAGGAGCTTTaGAGTGCAGCCTTGGGAGGGATAAGGGCACCTACG +
Preference number: 3 (lower is better)
Translates to: GRRKWAMETQEL*SAALGGIRAPT
Trigger: CGTAGGTGCCCTTATCCCTCCCAAGGCTGCACTGCAAAGCTCCTGTGTTTCCATTGCCCACTTTCTTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp CCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTaGGCTTTCTATCAGGCTCTAAGTACAGGCAGGTCC +
Preference number: 3 (lower is better)
Translates to: PSRPRELPSRST*AFYQALSTGRS
Trigger: GGACCTGCCTGTACTTAGAGCCTGATAGAAAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp AATCATGGTCTGCCTGGACCTAGCCAGGCTCACTGTTaGAGTCTTGTTGTGTGCTCTTCCTTCCAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: NHGLPGPSQAHC*SLVVCSSFQAQ
Trigger: CTGGGCCTGGAAGGAAGAGCACACAACAAGACTTCAACAGTGAGCCTGGCTAGGTCCAGGCAGACCATGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 72 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATaGTTTAGGTTCTCTCAACCCCCACACCCAGAGAGA +
Preference number: 3 (lower is better)
Translates to: VPIAGKRLCAAE*FRFSQPPHPER
Trigger: TCTCTCTGGGTGTGGGGGTTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp AGGCCTTTGTACCCCACTAGTGACTTGGTTTGGAGGTaGGCTGCCCCCAGAACAGGATGTAATCTTGGGCAA +
Preference number: 3 (lower is better)
Translates to: RPLYPTSDLVWR*AAPRTGCNLGQ
Trigger: TTGCCCAAGATTACATCCTGTTCTGGGGGCAGCCCACCTCCAAACCAAGTCACTAGTGGGGTACAAAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp ATCTGTGGCAGTAGGAATCTGCCAGGCTTCCTGTTCTaGAACCCAGCACTAGACCCGGAAAGGCATGTTTGG +
Preference number: 3 (lower is better)
Translates to: ICGSRNLPGFLF*NPALDPERHVW
Trigger: CCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCCTGGCAGATTCCTACTGCCACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGATCTTGTTTAAGCCAGTaGAGCTGGAGTTTTCTGTCG +
Preference number: 3 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGSCLSQ*SWSFLS
Trigger: CGACAGAAAACTCCAGCTCAACTGGCTTAAACAAGA...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTAGAGTTCCATTGGGATaGGCTTCTGTAGGCCTCTGT +
Preference number: 3 (lower is better)
Translates to: TVDALREGGPETSLASRLRVPLG*ASVGLC
Trigger: ACAGAGGCCTACAGAAGCCAATCCCAATGGAACTCT...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp TGGAGGTACAGTGGACGCTTTGAGGGAAGGAGGCCCTaGAACGTCTCTAGCAAGCAGGCTTTGGTAAACAGA +
Preference number: 3 (lower is better)
Translates to: WRYSGRFEGRRP*NVSSKQALVNR
Trigger: TCTGTTTACCAAAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGTACCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp CCCACCGATGTGCATTTAGGGGACAGAGACATTAGCTaGGGTAAGGGGTCCCTAAGACCTGAGACAGAACAA +
Preference number: 3 (lower is better)
Translates to: PTDVHLGDRDIS*GKGSLRPETEQ
Trigger: TTGTTCTGTCTCAGGTCTTAGGGACCCCTTACCTCAGCTAATGTCTCTGTCCCCTAAATGCACATCGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp TTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTaGCTGGGTGGGCCTCAAGTTACTTATAATTGGTGG +
Preference number: 3 (lower is better)
Translates to: FWNPALDPERHV*LGGPQVTYNWW
Trigger: CCACCAATTATAAGTAACTTGAGGCCCACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp GATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGCTCACTGTTGAAGTCTaGTTGTGTGCTCTTCCTTCC +
Preference number: 3 (lower is better)
Translates to: DMIQRQPLAAVHQQPDSMLTVEV*LCALPS
Trigger: GGAAGGAAGAGCACACAACAAGACTTCAACAGTGAG...CATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp GCCAGTGGGGTGATCAGAAATGGGACCTGCATGGTATaGGGACCAGTTATCCCCATCATTGTATGTTCACTC +
Preference number: 3 (lower is better)
Translates to: ASGVIRNGTCMV*GPVIPIIVCSL
Trigger: GAGTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 72 bp CCATGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTaGCGCTCTCCAAAAAGACGTCTCTTTGGGAACTCT +
Preference number: 3 (lower is better)
Translates to: PCYSLSEGFLVP*RSPKRRLFGNS
Trigger: AGAGTTCCCAAAGAGACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 72 bp CTGGGTGGGCCTCAAGTTACTTATAATTGGTGGCCATaGTATAGCCTGAGTGAAGGATTTCTGGTACCCTGC +
Preference number: 3 (lower is better)
Translates to: LGGPQVTYNWWP*YSLSEGFLVPC
Trigger: GCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCATGGCCACCAATTATAAGTAACTTGAGGCCCACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp AACTGTGAATTGTCCTGCCAGTGGGGTGATCAGAAATaGGACCTGCATGGTATGAGGACCAGTTATCCCCAT +
Preference number: 3 (lower is better)
Translates to: NCELSCQWGDQK*DLHGMRTSYPH
Trigger: ATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCAGGACAATTCACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp CTCAGTTTGCTCAAGAACTGTGAATTGTCCTGCCAGTaGGGTGATCAGAAATGGGACCTGCATGGTATGAGG +
Preference number: 3 (lower is better)
Translates to: LSLLKNCELSCQ*GDQKWDLHGMR
Trigger: CCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCAGGACAATTCACAGTTCTTGAGCAAACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp CCAACACCCATGCTCCCTTTTATCACAGATCCCCAGTaGAATTCAGTTACCTTCTCCTCCAGATGGCCATGT +
Preference number: 3 (lower is better)
Translates to: PTPMLPFITDPQ*NSVTFSSRWPC
Trigger: ACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGATCTGTGATAAAAGGGAGCATGGGTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp TTCTTGGTGGCAGTGACATACATACTGGTGATTCTCTaGCATGGCTGCCAGGTAGACATCTTTCTCTCGGTG +
Preference number: 3 (lower is better)
Translates to: FLVAVTYILVIL*HGCQVDIFLSV
Trigger: CACCGAGAGAAAGATGTCTACCTGGCAGCCATGTCAGAGAATCACCAGTATGTATGTCACTGCCACCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp TCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTaGTTCCATGTGGACTATACTGTTGCTTTCAGAAAT +
Preference number: 3 (lower is better)
Translates to: SEAASRCCSSAA*FHVDYTVAFRN
Trigger: ATTTCTGAAAGCAACAGTATAGTCCACATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp AGAGGGGTACTGGGAGTTGATAGAAAATTTGTCCTCAGTTGTAGGTTACTCTTAAGGCAGGAGAGTCGCTaGAATCAGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: RGVLGVDRKFVLSCRLLLRQESR*NQGGGG
Trigger: ACCTCCACCTCCCTGATTCAAGCGACTCTCCTGCCT...TAAGAGTAACCTACAACTGAGGACAAATTTTCTATCAACTCCCAGTACCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTCAGTTATCCCCATCATaGTATGTTCACTCACAAAGA +
Preference number: 3 (lower is better)
Translates to: RRREVNLMMVSMRHGNATQLSPS*YVHSQR
Trigger: TCTTTGTGAGTGAACATACAATGATGGGGATAACTG...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTAGACATGCCCTTTTCTaGCTTCTGGATGAGATACCT +
Preference number: 3 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRRHALF*LLDEIP
Trigger: AGGTATCTCATCCAGAAGCAAGAAAAGGGCATGTCT...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp GATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGGAAAAACACTCGTATTaGGATCCAACAACAGACACA +
Preference number: 3 (lower is better)
Translates to: DMIQRQPLAAVHQQPDSMEKHSY*DPTTDT
Trigger: TGTGTCTGTTGTTGGATCCAAATACGAGTGTTTTTC...CATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp CTCAAGTTACTTATAATTGGTGGCCATGCTATAGCCTaGGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAA +
Preference number: 3 (lower is better)
Translates to: LKLLIIGGHAIA*VKDFWYPAALQ
Trigger: TTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCATGGCCACCAATTATAAGTAACTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 72 bp ATGTGGACTATACTGTTGCTTTCAGAAATCATGGTCTaGCTGGACCTAGCCAGGCTCACTGTTGAAGTCTTG +
Preference number: 3 (lower is better)
Translates to: MWTILLLSEIMV*LDLARLTVEVL
Trigger: CAAGACTTCAACAGTGAGCCTGGCTAGGTCCAGGCAGACCATGATTTCTGAAAGCAACAGTATAGTCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp GTTTGGCTGGGTGGGCCTCAAGTTACTTATAATTGGTaGCCATGCTATAGCCTGAGTGAAGGATTTCTGGTA +
Preference number: 3 (lower is better)
Translates to: VWLGGPQVTYNW*PCYSLSEGFLV
Trigger: TACCAGAAATCCTTCACTCAGGCTATAGCATGGCCACCAATTATAAGTAACTTGAGGCCCACCCAGCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp CATGTTTGGCTGGGTGGGCCTCAAGTTACTTATAATTaGTGGCCATGCTATAGCCTGAGTGAAGGATTTCTG +
Preference number: 3 (lower is better)
Translates to: HVWLGGPQVTYN*WPCYSLSEGFL
Trigger: CAGAAATCCTTCACTCAGGCTATAGCATGGCCACCAATTATAAGTAACTTGAGGCCCACCCAGCCAAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp GATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGGAGTTGATAGAAAATTaGTCCTCAGTTGTAGGTTAC +
Preference number: 3 (lower is better)
Translates to: DMIQRQPLAAVHQQPDSMELIEN*SSVVGY
Trigger: GTAACCTACAACTGAGGACAAATTTTCTATCAACTC...CATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR-3UTR CAA 90 bp GAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATTGTATGTTCACTCTGAATTAGACTTTTaGCTGAAAGAACGCTCCCAG +
Preference number: 3 (lower is better)
Translates to: EMGPAWYEDQLSPSLYVHSELDF*LKERSQ
Trigger: CTGGGAGCGTTCTTTCAGCAAAAAGTCTAATTCAGA...GTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp TACTATTGTTTAGTGCCAGGATGGAAGGTGAGTCTCTaGATTAGACTTTTTGCTGAAAGAACGCTCCCAGCT +
Preference number: 3 (lower is better)
Translates to: YYCLVPGWKVSL*IRLFAERTLPA
Trigger: AGCTGGGAGCGTTCTTTCAGCAAAAAGTCTAATTCAGAGACTCACCTTCCATCCTGGCACTAAACAATAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp GCATACGCGCAAGGTTTTATTTGTAGTGGCACTGTATaGATTTGCAAGACTGGAAACCATGCAGATGTCCAT +
Preference number: 3 (lower is better)
Translates to: AYAQGFICSGTV*ICKTGNHADVH
Trigger: ATGGACATCTGCATGGTTTCCAGTCTTGCAAATTCATACAGTGCCACTACAAATAAAACCTTGCGCGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CCA 72 bp CTCCGGTGTCACAGGCACTGTTCTGTAAGATCACTTTaGCATTTTATTGAATACTTTCTGGTGAGGTTCTCT +
Preference number: 3 (lower is better)
Translates to: LRCHRHCSVRSL*HFIEYFLVRFS
Trigger: AGAGAACCTCACCAGAAAGTATTCAATAAAATGCCAAAGTGATCTTACAGAACAGTGCCTGTGACACCGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR GCA 72 bp TGCAAGAACTCGGCAAGTACCTATAGAATGTACGCCTaGATCTATGTTTATAAGGGAAAATTAGGCCTACAG +
Preference number: 3 (lower is better)
Translates to: CKNSASTYRMYA*IYVYKGKLGLQ
Trigger: CTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGCGTACATTCTATAGGTACTTGCCGAGTTCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR TCA 72 bp TACAATATTTTCTATGGCGTGATTTGTCTCCAGAGATaGTGTATATTGGCTGCTACCGTTAGCAAAAAGAAG +
Preference number: 3 (lower is better)
Translates to: YNIFYGVICLQR*CILAATVSKKK
Trigger: CTTCTTTTTGCTAACGGTAGCAGCCAATATACATCATCTCTGGAGACAAATCACGCCATAGAAAATATTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTGTCCAAGGCCAGGGGTaGGGCCTGGGCGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: GFLFWNPALDPERHVWLGVQGQG*GLGGGH
Trigger: GTGTCCACCGCCCAGGCCCCACCCCTGGCCTTGGAC...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGAGGTGGGCGGATCACCTaGGGTCAGGAGTTCGAGACG +
Preference number: 4 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGGGRIT*GQEFET
Trigger: CGTCTCGAACTCCTGACCTCAGGTGATCCGCCCACC...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTAGCCGGAGCTGCTCCTaGACGTCGCCGTCGGACATC +
Preference number: 4 (lower is better)
Translates to: GFLFWNPALDPERHVWLGSRSCS*TSPSDI
Trigger: GATGTCCGACGGCGACGTGCAGGAGCAGCTCCGGCT...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGGGACAGCATCAGGCATaGCCGCTGTGCATCCCGTGG +
Preference number: 4 (lower is better)
Translates to: STCLLAERAGLCTPLVTWGQHQA*PLCIPW
Trigger: CCACGGGATGCACAGCGGCCATGCCTGATGCTGTCC...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 72 bp GGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTaGGTTTGGAGGTGGGCTGCCCCCAGAACAGGATGT +
Preference number: 4 (lower is better)
Translates to: GREGRPLYPTSD*VWRWAAPRTGC
Trigger: ACATCCTGTTCTGGGGGCAGCCCACCTCCAAACCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTCTCAGGCCCTTCCGATaGTGGCCCCTTCTCACCATC +
Preference number: 4 (lower is better)
Translates to: GFLFWNPALDPERHVWLGLRPFR*WPLLTI
Trigger: GATGGTGAGAAGGGGCCATCATCGGAAGGGCCTGAG...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGATCCCGGGGCTGTATTTaGAGGAGAAGCCTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGSRGCI*RRSLLR
Trigger: ACGGAGAAGGCTTCTCCTTCAAATACAGCCCCGGGA...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGGAGGGAAGGAGGCCCTaGAACGTCTCTAGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: STCLLAERAGLCTPLVTWEGRRP*NVSSKQ
Trigger: CTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTC...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATGCTTTAGGTTCTCTCAAGTGGGGCCTGGGCGGTaGACACCCACCACCGAGGAA +
Preference number: 4 (lower is better)
Translates to: VPIAGKRLCAAECFRFSQVGPGR*TPTTEE
Trigger: TTCCTCGGTGGTGGGTGTCCACCGCCCAGGCCCCAC...TTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTCAGGCATGGCCGCTGTaGATCCCGTGGGCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TSSLTPRDASKTCPFLASQAWPL*IPWAQS
Trigger: AGACTGCGCCCACGGGATGCACAGCGGCCATGCCTG...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTCATGTATTCAGGGGATaGTGGGCCCAGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RRREVNLMMVSMRHGNATHVFRG*WAQPQA
Trigger: AGCCTGGGGCTGGGCCCAGCATCCCCTGAATACATG...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp TGCCAGTGGGGTGATCAGAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCAAGAACGCTCCCAGCTaGGCATGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: CQWGDQKWDLHGMRTSYPKNAPS*AWWLTP
Trigger: AGGCGTGAGCCACCATGCCCAGCTGGGAGCGTTCTT...GGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGGAGCACTTCAGACACTaGCTTCCGAGTGCCCACCAA +
Preference number: 4 (lower is better)
Translates to: STCLLAERAGLCTPLVTWEHFRH*LPSAHQ
Trigger: TTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTC...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTCAGCTGCTGTCAGGCTaGGCACAACCTCCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: RRREVNLMMVSMRHGNATQLLSG*AQPPPQ
Trigger: TTGAGGGGGAGGTTGTGCCCAGCCTGACAGCAGCTG...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTCCAGGCTTCCTGTTCTaGAACCCAGCACTAGACCCG +
Preference number: 4 (lower is better)
Translates to: TVDALREGGPETSLASRLPGFLF*NPALDP
Trigger: CGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCCTGG...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 72 bp CATCAGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTaGTACCCCACTAGTGACTTGGTTTGGAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: HQHLPFGREGRP*YPTSDLVWRWA
Trigger: AGCCCACCTCCAAACCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGAATACTGGTGATTCTCTaGCATGGCTGCCAGGTAGAC +
Preference number: 4 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGILVIL*HGCQVD
Trigger: GTCTACCTGGCAGCCATGTCAGAGAATCACCAGTAT...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTTCCCCCTCAAGGCTGTaGGGAGGGAAGAAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: TVDALREGGPETSLASRLSPSRL*GGKKGN
Trigger: GTTTCCTTTCTTCCCTCCTCACAGCCTTGAGGGGGA...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTGTATTCAGGGGATGCTaGGCCCAGCCCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TSSLTPRDASKTCPFLASVFRGC*AQPQAP
Trigger: TGGAGCCTGGGGCTGGGCCCAGCATCCCCTGAATAC...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 72 bp TGGTTGAAACATGGGCACGTGCCATATTCTGGCCAATaGGGATCTGAAGGGATGTGGGGCGGGGACATCTGG +
Preference number: 4 (lower is better)
Translates to: WLKHGHVPYSGQ*GSEGMWGGDIW
Trigger: CCAGATGTCCCCGCCCCACATCCCTTCAGATCCCAATTGGCCAGAATATGGCACGTGCCCATGTTTCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGGACAGAGACATTAGCTaGGGTAAGGGGTCCCTAAGA +
Preference number: 4 (lower is better)
Translates to: STCLLAERAGLCTPLVTWDRDIS*GKGSLR
Trigger: TCTTAGGGACCCCTTACCTCAGCTAATGTCTCTGTC...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGGGCCATGCTATAGCCTaGGTGAAGGATTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: STCLLAERAGLCTPLVTWGHAIA*VKDFWY
Trigger: GTACCAGAAATCCTTCACTCAGGCTATAGCATGGCC...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTGTACTACAGCCCAGCTaGCTCTGTGGCGTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: GFLFWNPALDPERHVWLGVLQPS*LCGVKK
Trigger: TTTCTTAACGCCACAGAGTCAGCTGGGCTGTAGTAC...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTGAGGTTCTCTTTCCCTaGACACAGGCTTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GFLFWNPALDPERHVWLGEVLFP*TQAFLP
Trigger: GGGAAGAAAAGCCTGTGTGCAGGGAAAGAGAACCTC...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGCTTTCTCTCGGTGTTTaGGCTCTTTCTCCCACACTG +
Preference number: 4 (lower is better)
Translates to: STCLLAERAGLCTPLVTWLSLGV*ALSPTL
Trigger: CAGTGTGGGAGAAAGAGCGCAAACACCGAGAGAAAG...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp TGCCAGTGGGGTGATCAGAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCGGAAACCTCCTCATCTaGCACCTCTCCTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: CQWGDQKWDLHGMRTSYPGNLLI*HLSCSE
Trigger: CTCACTGCAGGAGAGGTGGCAGATGAGGAGGTTTCC...GGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp TGCCAGTGGGGTGATCAGAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCTGGTCCATCAGCACCTaGCTTTTGGCAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: CQWGDQKWDLHGMRTSYPWSIST*LLAERA
Trigger: TGCCCTCTCTGCCAAAAGGCAGGTGCTGATGGACCA...GGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGGGATTTCTGGTACCCTaGCGCTCTCCAAAAAGACGT +
Preference number: 4 (lower is better)
Translates to: STCLLAERAGLCTPLVTWGFLVP*RSPKRR
Trigger: ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCC...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGAGAAATGGGACCTGCATaGTATGAGGACCAGTTATCC +
Preference number: 4 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGEMGPA*YEDQLS
Trigger: GGATAACTGGTCCTCATACCATGCAGGTCCCATTTC...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTCAAAAGGAATCAGAGTaGAACAGAGAGGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TVDALREGGPETSLASRLQKESE*NREGLP
Trigger: CGGGAGCCCCTCTCTGTTCCACTCTGATTCCTTTTG...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATAGTGCAGTGGCGCGATaGCTCACTGGAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDSAVAR*LTGTSA
Trigger: GGCGGAGGTTCCAGTGAGCCATCGCGCCACTGCACT...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGAAGAGGGAGAAGAAAGTaGGCAATGGAAACACAGGAG +
Preference number: 4 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGRGRRK*AMETQE
Trigger: CTCCTGTGTTTCCATTGCCCACTTTCTTCTCCCTCT...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTCCGGAAAGGCATGTTTaGCTGGGTGGGCCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: RRREVNLMMVSMRHGNATPERHV*LGGPQV
Trigger: AACTTGAGGCCCACCCAGCCAAACATGCCTTTCCGG...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 72 bp AGGGAGAAGAAAGTGGGCAATGGAAACACAGGAGCTTaGCAGTGCAGCCTTGGGAGGGATAAGGGCACCTAC +
Preference number: 4 (lower is better)
Translates to: REKKVGNGNTGA*QCSLGRDKGTY
Trigger: GTAGGTGCCCTTATCCCTCCCAAGGCTGCACTGCAAAGCTCCTGTGTTTCCATTGCCCACTTTCTTCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 72 bp ACTCTAGAACTGGAATGGTCCATCAGCACCTGCCTTTaGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTG +
Preference number: 4 (lower is better)
Translates to: TLELEWSISTCL*AERAGLCTPLV
Trigger: CACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCTGATGGACCATTCCAGTTCTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGAATCACAGATCCCCAGTaGAATTCAGTTACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGITDPQ*NSVTFS
Trigger: GGAGAAGGTAACTGAATTTCACTGGGGATCTGTGAT...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATTGTATGTTCACCTGGGGCCTAATGGATaGCTGTGGGCCTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: EMGPAWYEDQLSPSLYVHLGPNG*LWASTR
Trigger: CCTGGTGGAGGCCCACAGTCATCCATTAGGCCCCAG...GTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp GATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGGAGAGGAGGATTTTGTaGGCCTGGGAGGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: DMIQRQPLAAVHQQPDSMERRIL*AWEVKA
Trigger: AGCCTTGACCTCCCAGGCGCACAAAATCCTCCTCTC...CATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTTCAGAAATCATGGTCTaGCTGGACCTAGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RRREVNLMMVSMRHGNATSEIMV*LDLARL
Trigger: GAGCCTGGCTAGGTCCAGGCAGACCATGATTTCTGA...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTAGGCCTACAGAAGTCTaGAAAGAACAAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLRPTEV*KEQGHG
Trigger: CCCATGCCCTTGTTCTTTCCAGACTTCTGTAGGCCT...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGGGTCATTGGAAAAGGTaGTTACCGTCAGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: STCLLAERAGLCTPLVTWGHWKR*LPSVQE
Trigger: TTCCTGGACTGACGGTAACCACCTTTTCCAATGACC...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp CTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCGCCAGCTGTTCCTTCTaGACTCTCTGCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LQKDVSLGTLELEWSISTASCSF*TLCSSS
Trigger: GGAGGAGGAGCAGAGAGTTCAGAAGGAACAGCTGGC...GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATGCTTTAGGTTCTCTCAAAGGTCAAGGCTGCAGTaGGTCATGATGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: VPIAGKRLCAAECFRFSQRSRLQ*VMMAPL
Trigger: CAGTGGTGCCATCATGACTCACTGCAGCCTTGACCT...TTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTCCCAGTTACTCAGGCTaGGAGGAGGATTTTGTGCGC +
Preference number: 4 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRPSYSG*EEDFVR
Trigger: GCGCACAAAATCCTCCTCTCAGCCTGAGTAACTGGG...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATGCTTTAGGTTCTCTCAAGGGACCTGCATGGTATaGGGACCAGTTATCCCCATC +
Preference number: 4 (lower is better)
Translates to: VPIAGKRLCAAECFRFSQGTCMV*GPVIPI
Trigger: GATGGGGATAACTGGTCCTCATACCATGCAGGTCCC...TTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATGCTTTAGGTTCTCTCAAGGAAGAGGAGGATGCTaGGCACTTCAGACACTGGCT +
Preference number: 4 (lower is better)
Translates to: VPIAGKRLCAAECFRFSQGRGGC*ALQTLA
Trigger: AGCCAGTGTCTGAAGTGCTCAGCATCCTCCTCTTCC...TTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp GATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGACAGGAGCTTTGCAGTaGAGCCTTGGGAGGGATAAG +
Preference number: 4 (lower is better)
Translates to: DMIQRQPLAAVHQQPDSMTGALQ*SLGRDK
Trigger: CTTATCCCTCCCAAGGCTGCACTGCAAAGCTCCTGT...CATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATGCTTTAGGTTCTCTCAAACTGGTTCCCATCGCTaGAAAGAGGCTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VPIAGKRLCAAECFRFSQTGSHR*KEALCS
Trigger: GCTGCACAGAGCCTCTTTCCAGCGATGGGAACCAGT...TTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGGGCAGAGAGGGGTACTaGGAGTTGATAGAAAATTTG +
Preference number: 4 (lower is better)
Translates to: STCLLAERAGLCTPLVTWGREGY*ELIENL
Trigger: CAAATTTTCTATCAACTCCCAGTACCCCTCTCTGCC...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTACTAGTGACTTGGTTTaGAGGTGGGCTGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRTSDLV*RWAAPR
Trigger: TCTGGGGGCAGCCCACCTCCAAACCAAGTCACTAGT...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTTGCCAGGATGGAAGGTaGGTCTCTGAATTAGACTTT +
Preference number: 4 (lower is better)
Translates to: TVDALREGGPETSLASRLCQDGR*VSELDF
Trigger: AAAGTCTAATTCAGAGACTCACCTTCCATCCTGGCA...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATGAAACACAGGAGCTTTaGAGTGCAGCCTTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDETQEL*SAALGG
Trigger: CCCTCCCAAGGCTGCACTGCAAAGCTCCTGTGTTTC...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp GAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATTGTATGTTCACGAAAGAACAAGGGCATaGGGCAAGGGTGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: EMGPAWYEDQLSPSLYVHERTRA*GKGGDS
Trigger: GCTGTCCCCACCCTTGCCCCATGCCCTTGTTCTTTC...GTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTGGTGAGCATGAGGCATaGAAATGCCACTGCTCCACT +
Preference number: 4 (lower is better)
Translates to: TSSLTPRDASKTCPFLASGEHEA*KCHCST
Trigger: AGTGGAGCAGTGGCATTTCCATGCCTCATGCTCACC...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTCCCTTTTCTTGCTTCTaGATGAGATACCTGAACTCC +
Preference number: 4 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLPFSCF*MRYLNS
Trigger: GGAGTTCAGGTATCTCATCCAGAAGCAAGAAAAGGG...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTCATATTCTGGCCAATTaGGATCTGAAGGGATGTGGG +
Preference number: 4 (lower is better)
Translates to: RRREVNLMMVSMRHGNATHILAN*DLKGCG
Trigger: CCCACATCCCTTCAGATCCCAATTGGCCAGAATATG...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATTCAGCACCTGCCTTTTaGCAGAGAGGGCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDSAPAF*QRGQAF
Trigger: AAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCTGA...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp TGCCAGTGGGGTGATCAGAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCAAAGGCATGTTTGGCTaGGTGGGCCTCAAGTTACTT +
Preference number: 4 (lower is better)
Translates to: CQWGDQKWDLHGMRTSYPKGMFG*VGLKLL
Trigger: AAGTAACTTGAGGCCCACCCAGCCAAACATGCCTTT...GGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 72 bp TTCTGGTACCCTGCCGCTCTCCAAAAAGACGTCTCTTaGGGAACTCTAGAACTGGAATGGTCCATCAGCACC +
Preference number: 4 (lower is better)
Translates to: FWYPAALQKDVS*GTLELEWSIST
Trigger: GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAGAGCGGCAGGGTACCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATTGTATGTTCACTCCACCAGGCGCAGGTaGCCCTGCAGATATGATTCA +
Preference number: 4 (lower is better)
Translates to: EMGPAWYEDQLSPSLYVHSTRRR*PCRYDS
Trigger: TGAATCATATCTGCAGGGTCACCTGCGCCTGGTGGA...GTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATGCTTTAGGTTCTCTCAAAGATACCTGAACTCCTaGAGCCATCTTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: VPIAGKRLCAAECFRFSQRYLNS*SHLATM
Trigger: CATGGTGGCAAGATGGCTGCAGGAGTTCAGGTATCT...TTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTGACATGCCCTTTTCTTaGTTCTGGATGAGATACCTG +
Preference number: 4 (lower is better)
Translates to: RRREVNLMMVSMRHGNATDMPFS*FWMRYL
Trigger: CAGGTATCTCATCCAGAAGCAAGAAAAGGGCATGTC...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTGAATTGTCCTGCCAGTaGGGTGATCAGAAATGGGAC +
Preference number: 4 (lower is better)
Translates to: TSSLTPRDASKTCPFLASELSCQ*GDQKWD
Trigger: GTCCCATTTCTGATCACCCCACTGGCAGGACAATTC...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp CTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCAGTCTCCTGAGTAGCTaGGATTACAGGCGTGCGCTA +
Preference number: 4 (lower is better)
Translates to: LQKDVSLGTLELEWSISTSLLSS*DYRRAL
Trigger: TAGCGCACGCCTGTAATCCCAGCTACTCAGGAGACT...GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATGAGCTCCGACCATTCTaGGCCTGGAGTTGTTCTAAC +
Preference number: 4 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDELRPF*AWSCSN
Trigger: GTTAGAACAACTCCAGGCCCAGAATGGTCGGAGCTC...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp GATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGTCCCACATAGGATACTaGGGCCTAATGGATGACTGT +
Preference number: 4 (lower is better)
Translates to: DMIQRQPLAAVHQQPDSMSHIGY*GLMDDC
Trigger: ACAGTCATCCATTAGGCCCCAGTATCCTATGTGGGA...CATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp TGCCAGTGGGGTGATCAGAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCATTTGTCTCCAGAGATaGTGTATATTGGCTGCTACC +
Preference number: 4 (lower is better)
Translates to: CQWGDQKWDLHGMRTSYPICLQR*CILAAT
Trigger: GGTAGCAGCCAATATACATCATCTCTGGAGACAAAT...GGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACCCGCTGTGCATCCCGTaGGCGCAGTCTACATGTCGT +
Preference number: 4 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNPLCIP*AQSTCR
Trigger: ACGACATGTAGACTGCGCCCACGGGATGCACAGCGG...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp GAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATTGTATGTTCACGAGCCCAATAACAGCTaGAACCTCACCAGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: EMGPAWYEDQLSPSLYVHEPNNS*NLTSKQ
Trigger: CTGCTTGCTGGTGAGGTTCCAGCTGTTATTGGGCTC...GTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTTTTCTTCAGGGTCATTaGAAAAGGTGGTTACCGTCA +
Preference number: 4 (lower is better)
Translates to: RRREVNLMMVSMRHGNATFLQGH*KRWLPS
Trigger: TGACGGTAACCACCTTTTCCAATGACCCTGAAGAAA...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGAGAGATGATGTATATTaGCTGCTACCGTTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: STCLLAERAGLCTPLVTWRDDVY*LLPLAK
Trigger: TTTTGCTAACGGTAGCAGCCAATATACATCATCTCT...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATTGTATGTTCACCAGTACGAGGAAGACTaGGCTAAGAGAACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EMGPAWYEDQLSPSLYVHQYEED*AKRTAA
Trigger: AGCTGCAGTTCTCTTAGCTCAGTCTTCCTCGTACTG...GTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTAACTGTGAATTGTCCTaGCAGTGGGGTGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: TSSLTPRDASKTCPFLASNCELS*QWGDQK
Trigger: TTTCTGATCACCCCACTGGCAGGACAATTCACAGTT...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACCCAGGCCCAGAGAGCTaGCCAGTAGATCAACTTGGG +
Preference number: 4 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNPGPES*PVDQLG
Trigger: CCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGG...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTAGTGAGAGAAATTCTTaGCAGATCTTACCTCTAGTA +
Preference number: 4 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLSERNS*QILPLV
Trigger: TACTAGAGGTAAGATCTGCCAAGAATTTCTCTCACT...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTTTAAGCCAGTTGAGCTaGAGTTTTCTGTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: TSSLTPRDASKTCPFLASLSQLS*SFLSLQ
Trigger: CTGCAACGACAGAAAACTCCAGCTCAACTGGCTTAA...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTCCCAGTAGATCAACTTaGGCTTTCTATCAGGCTCTA +
Preference number: 4 (lower is better)
Translates to: TSSLTPRDASKTCPFLASPSRST*AFYQAL
Trigger: TAGAGCCTGATAGAAAGCCCAAGTTGATCTACTGGG...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACGGAACCTCCGCCTTCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNGTSAF*VQAILL
Trigger: CAGGAGAATCGCTTGAACTCAGAAGGCGGAGGTTCC...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATGCAGATACTGATGAGTaGCAGTCCACTGCTATTTGT +
Preference number: 4 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDADTDE*QSTAIC
Trigger: ACAAATAGCAGTGGACTGTCACTCATCAGTATCTGC...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACGTACAGTGGACGCTTTaGGGGAAGGAGGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNVQWTL*GKEALK
Trigger: TTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGTAC...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp ACAGTGGACGCTTTGAGGGAAGGAGGCCCTGAAACGTCTCTAGCAAGCAGGCTTTATAGAATGTACGCCTaGATCTATGTTTATAAGGGA +
Preference number: 4 (lower is better)
Translates to: TVDALREGGPETSLASRLYRMYA*IYVYKG
Trigger: TCCCTTATAAACATAGATGCAGGCGTACATTCTATA...AAGCCTGCTTGCTAGAGACGTTTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTATATTTCTAAGAACTTaGATAGGTTCTGTCGTTAGC +
Preference number: 4 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLIFLRT*IGSVVS
Trigger: GCTAACGACAGAACCTATGCAAGTTCTTAGAAATAT...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp CTTCAGTTTACTTTTCCCAATGCCATCAGGATTTTGACTCAAGTACACGAGTCAAGGATTTTGTGCGCCTaGGAGGTCAAGGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LQFTFPNAIRILTQVHESRILCA*EVKAAV
Trigger: CACTGCAGCCTTGACCTCCCAGGCGCACAAAATCCT...TGACTCGTGTACTTGAGTCAAAATCCTGATGGCATTGGGAAAAGTAAACTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTAAAAACACTCGTATTTaGATCCAACAACAGACACAG +
Preference number: 4 (lower is better)
Translates to: RRREVNLMMVSMRHGNATKNTRI*IQQQTQ
Trigger: CTGTGTCTGTTGTTGGATCCAAATACGAGTGTTTTT...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTCTAATTGTATCCAGATaGAGGTACAGTGGACGCTTT +
Preference number: 4 (lower is better)
Translates to: TSSLTPRDASKTCPFLASLIVSR*RYSGRF
Trigger: AAAGCGTCCACTGTACCTCCATCTGGATACAATTAG...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 72 bp GGACCTGCATGGTATGAGGACCAGTTATCCCCATCATaGTATGTTCACTCACAAAGACAGAACAATCCCCTC +
Preference number: 4 (lower is better)
Translates to: GPAWYEDQLSPS*YVHSQRQNNPL
Trigger: GAGGGGATTGTTCTGTCTTTGTGAGTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 72 bp CTAACTCTTGGCTTCTCACGTGAGAGAGCCCTGTTCTaGTTTAAGCCAGTTGAGCTGGAGTTTTCTGTCGTT +
Preference number: 4 (lower is better)
Translates to: LTLGFSRERALF*FKPVELEFSVV
Trigger: AACGACAGAAAACTCCAGCTCAACTGGCTTAAACAAGAACAGGGCTCTCTCACGTGAGAAGCCAAGAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp CTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCAACAGACACAGAGAGTaGATGGTCAGCAAGAAACAA +
Preference number: 4 (lower is better)
Translates to: LQKDVSLGTLELEWSISTNRHRE*MVSKKQ
Trigger: TTGTTTCTTGCTGACCATTCACTCTCTGTGTCTGTT...GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATATGCCATCAGGATTTTaGCTCAAGTACACGAGTCAT +
Preference number: 4 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDMPSGF*LKYTSH
Trigger: ATGACTCGTGTACTTGAGTCAAAATCCTGATGGCAT...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp CTTCAGTTTACTTTTCCCAATGCCATCAGGATTTTGACTCAAGTACACGAGTCACCACCTCTCCTGCAGTaGGAAGTAGAGACTAGACGT +
Preference number: 4 (lower is better)
Translates to: LQFTFPNAIRILTQVHESPPLLQ*EVETRR
Trigger: ACGTCTAGTCTCTACTTCTCACTGCAGGAGAGGTGG...TGACTCGTGTACTTGAGTCAAAATCCTGATGGCATTGGGAAAAGTAAACTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACGTGGCAGTAGGAATCTaGCAGGCTTCCTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNVAVGI*QASCSG
Trigger: TCCAGAACAGGAAGCCTGGCAGATTCCTACTGCCAC...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTCGAGTCATTCCTGTTTaGTATAATCAGAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: RRREVNLMMVSMRHGNATRVIPV*YNQKRK
Trigger: CTTTCTTTTCTGATTATACCAAACAGGAATGACTCG...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTCAAGTTACTTATAATTaGTGGCCATGCTATAGCCTG +
Preference number: 4 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRQVTYN*WPCYSL
Trigger: CAGGCTATAGCATGGCCACCAATTATAAGTAACTTG...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACTTTGCTCAAGAACTGTaGATTGTCCTGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNFAQEL*IVLPVG
Trigger: CCCCACTGGCAGGACAATTCACAGTTCTTGAGCAAA...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACAGCCAGGCTCACTGTTaGAGTCTTGTTGTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNSQAHC*SLVVCS
Trigger: AGAGCACACAACAAGACTTCAACAGTGAGCCTGGCT...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATGCTTTAGGTTCTCTCAATGTGGACTATACTGTTaGTTTCAGAAATCATGGTCT +
Preference number: 4 (lower is better)
Translates to: VPIAGKRLCAAECFRFSQCGLYC*FQKSWS
Trigger: AGACCATGATTTCTGAAAGCAACAGTATAGTCCACA...TTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp AGAGGGGTACTGGGAGTTGATAGAAAATTTGTCCTCAGTTGTAGGTTACTCTTAAGGCCTCTAACCTGCTaGAAGATAGGGACCAAGTTG +
Preference number: 4 (lower is better)
Translates to: RGVLGVDRKFVLSCRLLLRPLTC*KIGTKL
Trigger: CAACTTGGTCCCTATCTTCCAGCAGGTTAGAGGCCT...TAAGAGTAACCTACAACTGAGGACAAATTTTCTATCAACTCCCAGTACCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACTGGGGTGATCAGAAATaGGACCTGCATGGTATGAGG +
Preference number: 4 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNWGDQK*DLHGMR
Trigger: CCTCATACCATGCAGGTCCCATTTCTGATCACCCCA...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACCATAGGAAACCCAACTaGAACAGGTGTCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNHRKPN*NRCLPN
Trigger: GTTGGGGAGACACCTGTTCCAGTTGGGTTTCCTATG...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACTTCTGTAGGCCTCTGTaGCTCTTAGGTTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNFCRPL*LLGSWW
Trigger: CCACCAAGAACCTAAGAGCCACAGAGGCCTACAGAA...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp CTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCGTTACTTATAATTGGTaGCCATGCTATAGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LQKDVSLGTLELEWSISTVTYNW*PCYSLS
Trigger: ACTCAGGCTATAGCATGGCCACCAATTATAAGTAAC...GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp GTTCCCATCGCTGGAAAGAGGCTCTGTGCAGCTGAATGCTTTAGGTTCTCTCAACTACAATATTTTCTATaGCGTGATTTGTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VPIAGKRLCAAECFRFSQLQYFL*RDLSPE
Trigger: CTCTGGAGACAAATCACGCCATAGAAAATATTGTAG...TTGAGAGAACCTAAAGCATTCAGCTGCACAGAGCCTCTTTCCAGCGATGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp CTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCATGAATTTGCAAGACTaGAAACCATGCAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: LQKDVSLGTLELEWSISTMNLQD*KPCRCP
Trigger: TGGACATCTGCATGGTTTCCAGTCTTGCAAATTCAT...GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATATATTTTCTATGGCGTaGTTTGTCTCCAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDIFSMA*FVSRDD
Trigger: ATCATCTCTGGAGACAAATCACGCCATAGAAAATAT...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp AGAGGGGTACTGGGAGTTGATAGAAAATTTGTCCTCAGTTGTAGGTTACTCTTAGACGCAAGCAAGACATaGCCTTTTCTTGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RGVLGVDRKFVLSCRLLLDASKT*PFLASG
Trigger: TCCAGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTC...TAAGAGTAACCTACAACTGAGGACAAATTTTCTATCAACTCCCAGTACCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp AGAGGGGTACTGGGAGTTGATAGAAAATTTGTCCTCAGTTGTAGGTTACTCTTACTCTGTGCAGCTGAATaGTTTAGGTTCTCTCAACCC +
Preference number: 4 (lower is better)
Translates to: RGVLGVDRKFVLSCRLLLLCAAE*FRFSQP
Trigger: GGGTTGAGAGAACCTAAAGCATTCAGCTGCACAGAG...TAAGAGTAACCTACAACTGAGGACAAATTTTCTATCAACTCCCAGTACCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CCA 90 bp AGAGGGGTACTGGGAGTTGATAGAAAATTTGTCCTCAGTTGTAGGTTACTCTTAGGTGATTCTCTGACATaGCTGCCAGGTAGACATCTT +
Preference number: 4 (lower is better)
Translates to: RGVLGVDRKFVLSCRLLLGDSLT*LPGRHL
Trigger: AAGATGTCTACCTGGCAGCCATGTCAGAGAATCACC...TAAGAGTAACCTACAACTGAGGACAAATTTTCTATCAACTCCCAGTACCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp CTTCAGTTTACTTTTCCCAATGCCATCAGGATTTTGACTCAAGTACACGAGTCATTGAATACTTTCTGGTaGGGTTCTCTTTCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LQFTFPNAIRILTQVHESLNTFW*GSLSLH
Trigger: GTGCAGGGAAAGAGAACCTCACCAGAAAGTATTCAA...TGACTCGTGTACTTGAGTCAAAATCCTGATGGCATTGGGAAAAGTAAACTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp AGAGGGGTACTGGGAGTTGATAGAAAATTTGTCCTCAGTTGTAGGTTACTCTTAGAGAACAATCTCAGATaGGGTAGCAGAAATGGTGTC +
Preference number: 4 (lower is better)
Translates to: RGVLGVDRKFVLSCRLLLENNLR*GSRNGV
Trigger: GACACCATTTCTGCTACCTCATCTGAGATTGTTCTC...TAAGAGTAACCTACAACTGAGGACAAATTTTCTATCAACTCCCAGTACCCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR TCA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACTGTTCATCAGCAGCCTaGTTCCATGTGGACTATACT +
Preference number: 4 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNCSSAA*FHVDYT
Trigger: AGTATAGTCCACATGGAATCAGGCTGCTGATGAACA...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp GAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATTGTATGTTCACGTTTACTTTTCCCAATaGCATCAGGATTTTGACTCA +
Preference number: 4 (lower is better)
Translates to: EMGPAWYEDQLSPSLYVHVYFSQ*HQDFDS
Trigger: TGAGTCAAAATCCTGATGGCATTGGGAAAAGTAAAC...GTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 72 bp GAGAGAAATTCTTGGCAGATCTTACCTCTAGTACTATaGTTTAGTGCCAGGATGGAAGGTGAGTCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: ERNSWQILPLVL*FSARMEGESLN
Trigger: ATTCAGAGACTCACCTTCCATCCTGGCACTAAACAATAGTACTAGAGGTAAGATCTGCCAAGAATTTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp AGAGGGGTACTGGGAGTTGATAGAAAATTTGTCCTCAGTTGTAGGTTACTCTTATATAATTGGTGGCCATaGTATAGCCTGAGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RGVLGVDRKFVLSCRLLLYNWWP*YSLSEG
Trigger: TCCTTCACTCAGGCTATAGCATGGCCACCAATTATA...TAAGAGTAACCTACAACTGAGGACAAATTTTCTATCAACTCCCAGTACCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR GCA 90 bp AGAGGGGTACTGGGAGTTGATAGAAAATTTGTCCTCAGTTGTAGGTTACTCTTAACTGCTGTTTCTTTCTaGCCTCCTTTATGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: RGVLGVDRKFVLSCRLLLTAVSF*PPLCFL
Trigger: TAAAAAGCATAAAGGAGGGCAGAAAGAAACAGCAGT...TAAGAGTAACCTACAACTGAGGACAAATTTTCTATCAACTCCCAGTACCCCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355797.7
3UTR CAA 72 bp TTCCTTCAGTTTACTTTTCCCAATGCCATCAGGATTTaGACTCAAGTACACGAGTCATTCCTGTTTGGTATA +
Preference number: 4 (lower is better)
Translates to: FLQFTFPNAIRI*TQVHESFLFGI
Trigger: TATACCAAACAGGAATGACTCGTGTACTTGAGTCAAAATCCTGATGGCATTGGGAAAAGTAAACTGAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS GCA 90 bp GGGCAGAAGGTAGGGGAGACAGAGGAGGCCCTCGAAGGTCCAGCCTaGCCACGCCCTGTGGCAGCGCCTGCCCTGTGGTCATGGTCAACC +
Preference number: 5 (lower is better)
Translates to: GQKVGETEEALEGPA*PRPVAAPALWSWST
Trigger: GGTTGACCATGACCACAGGGCAGGCGCTGCCACAGGGCGTGGGCAGGCTGGACCTTCGAGGGCCTCCTCTGTCTCCCCTACCTTCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS GCA 90 bp GGGCCCAGGACTCCCACTGCGACGCTGCGGCCAGCAGACAAAGGGTaGAAGAGGAAAGCTGGCTGGGGTGTCTGTCTGGGACCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: GPRTPTATLRPADKG*KRKAGWGVCLGPGP
Trigger: TGGCCCTGGTCCCAGACAGACACCCCAGCCAGCTTTCCTCTTGCACCCTTTGTCTGCTGGCCGCAGCGTCGCAGTGGGAGTCCTGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS GCA 90 bp AAGGGCATGGGGCAAGGGTGGGGACAGCATCAGGCATGGCCGCTGTaGATCCCGTGGGCGCAGTCTACATGTCGTAGAGCCGGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: KGMGQGWGQHQAWPL*IPWAQSTCRRAGAA
Trigger: AGCAGCTCCGGCTCTACGACATGTAGACTGCGCCCACGGGATGCACAGCGGCCATGCCTGATGCTGTCCCCACCCTTGCCCCATGCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS GCA 90 bp TGTGTGCCATTTGGAGAAGTGGGCCCAGGACTCCCACTGCGACGCTaGGGCCAGCAGACAAAGGGTGCAAGAGGAAAGCTGGCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: CVPFGEVGPGLPLRR*GQQTKGARGKLAGV
Trigger: CACCCCAGCCAGCTTTCCTCTTGCACCCTTTGTCTGCTGGCCGCAGCGTCGCAGTGGGAGTCCTGGGCCCACTTCTCCAAATGGCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS GCA 90 bp GAGGCTTCTGTGTGCCATTTGGAGAAGTGGGCCCAGGACTCCCACTaGGACGCTGCGGCCAGCAGACAAAGGGTGCAAGAGGAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: EASVCHLEKWAQDSH*DAAASRQRVQEESW
Trigger: CCAGCTTTCCTCTTGCACCCTTTGTCTGCTGGCCGCAGCGTCGCAGTGGGAGTCCTGGGCCCACTTCTCCAAATGGCACACAGAAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS GCA 90 bp AGAAGTGACTTCAGCTTGCAGGAATGTCAGAGGATGAGAGCGACGTaGCGTGCCCATGGGCTCTGTGGGATTGAAGGTCATGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: RSDFSLQECQRMRAT*RAHGLCGIEGHGEG
Trigger: CCCCTCCCCATGACCTTCAATCCCACAGAGCCCATGGGCACGGCACGTCGCTCTCATCCTCTGACATTCCTGCAAGCTGAAGTCACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589082.1
ENST00000592148.1
CDS TCA 90 bp AACTTCAACTTGGAAGCCCAGTGGGTAGATGTGGAAATGAATGAATaGGCAGCCCCAGCTGATCCCATGGAGCCCAGCCAGCGTCGGCCG +
Preference number: 5 (lower is better)
Translates to: NFNLEAQWVDVEMNE*AAPADPMEPSQRRP
Trigger: CGGCCGACGCTGGCTGGGCTCCATGGGATCAGCTGGGGCTGCTCATTCATTCATTTCCACATCTACCCACTGGGCTTCCAAGTTGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS-3UTR CAA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTAGGGCACCTACGGGTTaGCCCTGCCCACCGATGTGC +
Preference number: 5 (lower is better)
Translates to: TSSLTPRDASKTCPFLASRAPTG*PCPPMC
Trigger: GCACATCGGTGGGCAGGGCAAACCCGTAGGTGCCCT...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS TCA 90 bp TGGTGGAAGGAAGAAGTGACTTCAGCTTGCAGGAATGTCAGAGGATaGGAGCGACGTGCCGTGCCCATGGGCTCTGTGGGATTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: WWKEEVTSACRNVRG*ERRAVPMGSVGLKV
Trigger: GACCTTCAATCCCACAGAGCCCATGGGCACGGCACGTCGCTCTCATCCTCTGACATTCCTGCAAGCTGAAGTCACTTCTTCCTTCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589082.1
ENST00000592148.1
CDS TCA 90 bp ATGATCAGAGGAATGGCCCGGGATGGCCTTGGTGGAAGGAAGAAGTaGCTTCAGCTTGCAGGAATGTCAGAGGATGAGAGCGACGTGCCG +
Preference number: 5 (lower is better)
Translates to: MIRGMARDGLGGRKK*LQLAGMSEDESDVP
Trigger: CGGCACGTCGCTCTCATCCTCTGACATTCCTGCAAGCTGAAGTCACTTCTTCCTTCCACCAAGGCCATCCCGGGCCATTCCTCTGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589082.1
ENST00000592148.1
CDS-3UTR CAA 90 bp CGACGGCGGGAAGTTAACCTCATGATGGTGAGCATGAGGCATGGAAATGCCACTGGAAACACAGGAGCTTaGCAGTGCAGCCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: RRREVNLMMVSMRHGNATGNTGA*QCSLGR
Trigger: CCTCCCAAGGCTGCACTGCAAAGCTCCTGTGTTTCC...AGTGGCATTTCCATGCCTCATGCTCACCATCATGAGGTTAACTTCCCGCCGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGATTGTCTTTCATGAGCTaGAAGATGGCAGCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGLSFMS*KMAASC
Trigger: ACAGCTGGCTGCCATCTTCAAGCTCATGAAAGACAA...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp GATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGATCAGCACCTGCCTTTaGGCAGAGAGGGCAGGCCTT +
Preference number: 5 (lower is better)
Translates to: DMIQRQPLAAVHQQPDSMISTCL*AERAGL
Trigger: AAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCTGAT...CATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTTCGCCAAACGTCTCCTaGTTGTCTTTCATGAGCTTG +
Preference number: 5 (lower is better)
Translates to: GFLFWNPALDPERHVWLGSPNVS*LSFMSL
Trigger: CAAGCTCATGAAAGACAACAAGGAGACGTTTGGCGA...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp TGCTATAGCCTGAGTGAAGGATTTCTGGTACCCTGCCGCTCTCCAAAAAGACGTAGGCAGGAGAGTCGCTaGAATCAGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: CYSLSEGFLVPCRSPKRRRQESR*NQGGGG
Trigger: ACCTCCACCTCCCTGATTCAAGCGACTCTCCTGCCT...ACGTCTTTTTGGAGAGCGGCAGGGTACCAGAAATCCTTCACTCAGGCTATAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTCTCAAGAACTGTGAATaGTCCTGCCAGTGGGGTGAT +
Preference number: 5 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLLKNCE*SCQWGD
Trigger: ATCACCCCACTGGCAGGACAATTCACAGTTCTTGAG...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGATGGAGTTTTCTGTCGTaGCAGTCAGAACATCTTAGC +
Preference number: 5 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGWSFLS*QSEHLS
Trigger: GCTAAGATGTTCTGACTGCAACGACAGAAAACTCCA...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATCCCGGAAAGGCATGTTaGGCTGGGTGGGCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDPGKAC*AGWASS
Trigger: ACTTGAGGCCCACCCAGCCAAACATGCCTTTCCGGG...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGATGGCACTGTATGAATTaGCAAGACTGGAAACCATGC +
Preference number: 5 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGWHCMN*QDWKPC
Trigger: GCATGGTTTCCAGTCTTGCAAATTCATACAGTGCCA...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTCCAAACGTCTCCTTGTaGTCTTTCATGAGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GFLFWNPALDPERHVWLGPNVSL*SFMSLK
Trigger: CTTCAAGCTCATGAAAGACAACAAGGAGACGTTTGG...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATGGTACAGTGGACGCTTaGAGGGAAGGAGGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDGTVDA*REGGPE
Trigger: TTCAGGGCCTCCTTCCCTCAAAGCGTCCACTGTACC...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTAGGCAGGAGAATCACTaGAACCCAGAAGGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: TSSLTPRDASKTCPFLASRQENH*NPEGEG
Trigger: CCCTTCACCTTCTGGGTTCAAGTGATTCTCCTGCCT...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp AGCACCTGCCTTTTGGCAGAGAGGGCAGGCCTTTGTACCCCACTAGTGACTTGGTCTGAATTAGACTTTTaGCTGAAAGAACGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: STCLLAERAGLCTPLVTWSELDF*LKERSQ
Trigger: CTGGGAGCGTTCTTTCAGCAAAAAGTCTAATTCAGA...CCAAGTCACTAGTGGGGTACAAAGGCCTGCCCTCTCTGCCAAAAGGCAGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp ATGCTGAGCACTTCAGACACTGGCTTCCGAGTGCCCACCAAGCCCTGTCCTGGACAGTTATCCCCATCATaGTATGTTCACTCACAAAGA +
Preference number: 5 (lower is better)
Translates to: MLSTSDTGFRVPTKPCPGQLSPS*YVHSQR
Trigger: TCTTTGTGAGTGAACATACAATGATGGGGATAACTG...TCCAGGACAGGGCTTGGTGGGCACTCGGAAGCCAGTGTCTGAAGTGCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp TGCCAGTGGGGTGATCAGAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCTCACTGTTGAAGTCTaGTTGTGTGCTCTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: CQWGDQKWDLHGMRTSYPLTVEV*LCALPS
Trigger: GGAAGGAAGAGCACACAACAAGACTTCAACAGTGAG...GGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTCCATATTCTGGCCAATaGGGATCTGAAGGGATGTGG +
Preference number: 5 (lower is better)
Translates to: TSSLTPRDASKTCPFLASPYSGQ*GSEGMW
Trigger: CCACATCCCTTCAGATCCCAATTGGCCAGAATATGG...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp CTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCCCAGAGAGAGTTCCATaGGGATTGGCTTCTGTAGGC +
Preference number: 5 (lower is better)
Translates to: LQKDVSLGTLELEWSISTPERVP*GLASVG
Trigger: GCCTACAGAAGCCAATCCCAATGGAACTCTCTCTGG...GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp GATATGATTCAGAGGCAGCCTCTCGCTGCTGTTCATCAGCAGCCTGATTCCATGAGACATGCCCTTTTCTaGCTTCTGGATGAGATACCT +
Preference number: 5 (lower is better)
Translates to: DMIQRQPLAAVHQQPDSMRHALF*LLDEIP
Trigger: AGGTATCTCATCCAGAAGCAAGAAAAGGGCATGTCT...CATGGAATCAGGCTGCTGATGAACAGCAGCGAGAGGCTGCCTCTGAATCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp ACCAGTTCCCTTACGCCTAGAGACGCAAGCAAGACATGCCCTTTTCTTGCTTCTGTGGCTCTTAGGTTCTaGGTGGCAGTGACATACATA +
Preference number: 5 (lower is better)
Translates to: TSSLTPRDASKTCPFLASVALRF*VAVTYI
Trigger: TATGTATGTCACTGCCACCAAGAACCTAAGAGCCAC...AGAAGCAAGAAAAGGGCATGTCTTGCTTGCGTCTCTAGGCGTAAGGGAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp GGCTTCCTGTTCTGGAACCCAGCACTAGACCCGGAAAGGCATGTTTGGCTGGGTGAGTTGATAGAAAATTaGTCCTCAGTTGTAGGTTAC +
Preference number: 5 (lower is better)
Translates to: GFLFWNPALDPERHVWLGELIEN*SSVVGY
Trigger: GTAACCTACAACTGAGGACAAATTTTCTATCAACTC...ACCCAGCCAAACATGCCTTTCCGGGTCTAGTGCTGGGTTCCAGAACAGGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp TGCCAGTGGGGTGATCAGAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCAAAAAGACGTCTCTTaGGGAACTCTAGAACTGGAA +
Preference number: 5 (lower is better)
Translates to: CQWGDQKWDLHGMRTSYPQKDVS*GTLELE
Trigger: TTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTG...GGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp TGTGTGCTCTTCCTTCCAGGCCCAGAGAGCTGCCCAGTAGATCAACTTGGGCTTTTTCTATGGCGTGATTaGTCTCCAGAGATGATGTAT +
Preference number: 5 (lower is better)
Translates to: CVLFLPGPESCPVDQLGLFLWRD*SPEMMY
Trigger: ATACATCATCTCTGGAGACAAATCACGCCATAGAAA...AAGCCCAAGTTGATCTACTGGGCAGCTCTCTGGGCCTGGAAGGAAGAGCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp GAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATTGTATGTTCACTCTTTCTCTCGGTGTTaGCGCTCTTTCTCCCACACT +
Preference number: 5 (lower is better)
Translates to: EMGPAWYEDQLSPSLYVHSFSRC*RSFSHT
Trigger: AGTGTGGGAGAAAGAGCGCAAACACCGAGAGAAAGA...GTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp GAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCCATCATTGTATGTTCACAGAGTTCCATTGGGATaGGCTTCTGTAGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: EMGPAWYEDQLSPSLYVHRVPLG*ASVGLC
Trigger: ACAGAGGCCTACAGAAGCCAATCCCAATGGAACTCT...GTGAACATACAATGATGGGGATAACTGGTCCTCATACCATGCAGGTCCCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp CTCCAAAAAGACGTCTCTTTGGGAACTCTAGAACTGGAATGGTCCATCAGCACCACTGTTGAAGTCTTGTaGTGTGCTCTTCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LQKDVSLGTLELEWSISTTVEVL*CALPSR
Trigger: CCTGGAAGGAAGAGCACACAACAAGACTTCAACAGT...GGTGCTGATGGACCATTCCAGTTCTAGAGTTCCCAAAGAGACGTCTTTTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp TGCCAGTGGGGTGATCAGAAATGGGACCTGCATGGTATGAGGACCAGTTATCCCATGTGGACTATACTGTaGCTTTCAGAAATCATGGTC +
Preference number: 5 (lower is better)
Translates to: CQWGDQKWDLHGMRTSYPMWTIL*LSEIMV
Trigger: GACCATGATTTCTGAAAGCAACAGTATAGTCCACAT...GGGATAACTGGTCCTCATACCATGCAGGTCCCATTTCTGATCACCCCACTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS GCA 90 bp GGGCACTTTGTACACACAGACTTAGTGCTATCTATGGCGAAGTGGTaGCTGTGTGTCCTGACGTTTCCCAAATTTTGCACAGCAAAGTAT +
Preference number: 5 (lower is better)
Translates to: GHFVHTDLVLSMAKW*LCVLTFPKFCTAKY
Trigger: ATACTTTGCTGTGCAAAATTTGGGAAACGTCAGGACACACAGGCACCACTTCGCCATAGATAGCACTAAGTCTGTGTGTACAAAGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS-3UTR CAA 90 bp TCCCCAGTGAAATTCAGTTACCTTCTCCTCCAGATGGCCATGTATTCAGGGGATGAAAAACACTCGTATTaGGATCCAACAACAGACACA +
Preference number: 5 (lower is better)
Translates to: SPVKFSYLLLQMAMYSGDEKHSY*DPTTDT
Trigger: TGTGTCTGTTGTTGGATCCAAATACGAGTGTTTTTC...ATCCCCTGAATACATGGCCATCTGGAGGAGAAGGTAACTGAATTTCACTGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp GCCTGCATCTATGTTTATAAGGGAAAATTAGGCCTACAGAAGTCTGGAAAGAACAGAGATGTAAAGGCTTaGAGACTGGTTCCCATCGCT +
Preference number: 5 (lower is better)
Translates to: ACIYVYKGKLGLQKSGKNRDVKA*RLVPIA
Trigger: AGCGATGGGAACCAGTCTCAAAGCCTTTACATCTCT...GTTCTTTCCAGACTTCTGTAGGCCTAATTTTCCCTTATAAACATAGATGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp CTTCAGTTTACTTTTCCCAATGCCATCAGGATTTTGACTCAAGTACACGAGTCAGAGGGGTACTGGGAGTaGATAGAAAATTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LQFTFPNAIRILTQVHESEGYWE*IENLSS
Trigger: TGAGGACAAATTTTCTATCAACTCCCAGTACCCCTC...TGACTCGTGTACTTGAGTCAAAATCCTGATGGCATTGGGAAAAGTAAACTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS-3UTR CAA 90 bp CTTCAGTTTACTTTTCCCAATGCCATCAGGATTTTGACTCAAGTACACGAGTCAAATGCCATCAGGATTTaGACTCAAGTACACGAGTCA +
Preference number: 5 (lower is better)
Translates to: LQFTFPNAIRILTQVHESNAIRI*TQVHES
Trigger: TGACTCGTGTACTTGAGTCAAAATCCTGATGGCATT...TGACTCGTGTACTTGAGTCAAAATCCTGATGGCATTGGGAAAAGTAAACTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS GCA 72 bp GTAGGGGAGACAGAGGAGGCCCTCGAAGGTCCAGCCTaGCCACGCCCTGTGGCAGCGCCTGCCCTGTGGTCA +
Preference number: 6 (lower is better)
Translates to: VGETEEALEGPA*PRPVAAPALWS
Trigger: TGACCACAGGGCAGGCGCTGCCACAGGGCGTGGGCAGGCTGGACCTTCGAGGGCCTCCTCTGTCTCCCCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS CCA 72 bp CCAGCCTGCCCACGCCCTGTGGCAGCGCCTGCCCTGTaGTCATGGTCAACCAGCAGGTGGGGGCTGTGTACA +
Preference number: 6 (lower is better)
Translates to: PACPRPVAAPAL*SWSTSRWGLCT
Trigger: TGTACACAGCCCCCACCTGCTGGTTGACCATGACCACAGGGCAGGCGCTGCCACAGGGCGTGGGCAGGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS CCA 72 bp AGGAGGCCCTCGAAGGTCCAGCCTGCCCACGCCCTGTaGCAGCGCCTGCCCTGTGGTCATGGTCAACCAGCA +
Preference number: 6 (lower is better)
Translates to: RRPSKVQPAHAL*QRLPCGHGQPA
Trigger: TGCTGGTTGACCATGACCACAGGGCAGGCGCTGCCACAGGGCGTGGGCAGGCTGGACCTTCGAGGGCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS CCA 72 bp TGGGGACAGCATCAGGCATGGCCGCTGTGCATCCCGTaGGCGCAGTCTACATGTCGTAGAGCCGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: WGQHQAWPLCIP*AQSTCRRAGAA
Trigger: AGCAGCTCCGGCTCTACGACATGTAGACTGCGCCCACGGGATGCACAGCGGCCATGCCTGATGCTGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS GCA 72 bp ACTCCCACTGCGACGCTGCGGCCAGCAGACAAAGGGTaGAAGAGGAAAGCTGGCTGGGGTGTCTGTCTGGGA +
Preference number: 6 (lower is better)
Translates to: TPTATLRPADKG*KRKAGWGVCLG
Trigger: TCCCAGACAGACACCCCAGCCAGCTTTCCTCTTGCACCCTTTGTCTGCTGGCCGCAGCGTCGCAGTGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS GCA 72 bp GTGTGCCATTTGGAGAAGTGGGCCCAGGACTCCCACTaGGACGCTGCGGCCAGCAGACAAAGGGTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: VCHLEKWAQDSH*DAAASRQRVQE
Trigger: CTCTTGCACCCTTTGTCTGCTGGCCGCAGCGTCGCAGTGGGAGTCCTGGGCCCACTTCTCCAAATGGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS CAA 72 bp CCCAGGTGGGTGCCTGTTGAGGCTTCTGTGTGCCATTaGGAGAAGTGGGCCCAGGACTCCCACTGCGACGCT +
Preference number: 6 (lower is better)
Translates to: PRWVPVEASVCH*EKWAQDSHCDA
Trigger: AGCGTCGCAGTGGGAGTCCTGGGCCCACTTCTCCAAATGGCACACAGAAGCCTCAACAGGCACCCACCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS GCA 72 bp TTTGGAGAAGTGGGCCCAGGACTCCCACTGCGACGCTaGGGCCAGCAGACAAAGGGTGCAAGAGGAAAGCTG +
Preference number: 6 (lower is better)
Translates to: FGEVGPGLPLRR*GQQTKGARGKL
Trigger: CAGCTTTCCTCTTGCACCCTTTGTCTGCTGGCCGCAGCGTCGCAGTGGGAGTCCTGGGCCCACTTCTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS TCA 72 bp CGTCGGCCGCTCACGGGAGGCTCCCTAACAAAACACTaGGCTGTGCCGGGAGGCAAAGTTTTTACAAGCCCC +
Preference number: 6 (lower is better)
Translates to: RRPLTGGSLTKH*AVPGGKVFTSP
Trigger: GGGGCTTGTAAAAACTTTGCCTCCCGGCACAGCTCAGTGTTTTGTTAGGGAGCCTCCCGTGAGCGGCCGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS TCA 72 bp GAAGAAGTGACTTCAGCTTGCAGGAATGTCAGAGGATaGGAGCGACGTGCCGTGCCCATGGGCTCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: EEVTSACRNVRG*ERRAVPMGSVG
Trigger: TCCCACAGAGCCCATGGGCACGGCACGTCGCTCTCATCCTCTGACATTCCTGCAAGCTGAAGTCACTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589082.1
ENST00000592148.1
CDS TCA 72 bp TTTCCCAAATTTTGCACAGCAAAGTATCTCTATGGCTaGGGTCGGAGTGGGCAGGCCTCTTCCGGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: FPKFCTAKYLYG*GRSGQASSGGR
Trigger: CCTGCCCCCGGAAGAGGCCTGCCCACTCCGACCTCAGCCATAGAGATACTTTGCTGTGCAAAATTTGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS TCA 72 bp GGAATGGCCCGGGATGGCCTTGGTGGAAGGAAGAAGTaGCTTCAGCTTGCAGGAATGTCAGAGGATGAGAGC +
Preference number: 6 (lower is better)
Translates to: GMARDGLGGRKK*LQLAGMSEDES
Trigger: GCTCTCATCCTCTGACATTCCTGCAAGCTGAAGTCACTTCTTCCTTCCACCAAGGCCATCCCGGGCCATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589082.1
ENST00000592148.1
CDS GCA 72 bp TTCAGCTTGCAGGAATGTCAGAGGATGAGAGCGACGTaGCGTGCCCATGGGCTCTGTGGGATTGAAGGTCAT +
Preference number: 6 (lower is better)
Translates to: FSLQECQRMRAT*RAHGLCGIEGH
Trigger: ATGACCTTCAATCCCACAGAGCCCATGGGCACGGCACGTCGCTCTCATCCTCTGACATTCCTGCAAGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589082.1
ENST00000592148.1
CDS CCA 72 bp ATGGTCAACCAGCAGGTGGGGGCTGTGTACAAACGATaGGCCAAAGTGACTCGGCTCACAAATGCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: MVNQQVGAVYKR*AKVTRLTNAEL
Trigger: CAGCTCAGCATTTGTGAGCCGAGTCACTTTGGCCCATCGTTTGTACACAGCCCCCACCTGCTGGTTGACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS CAA 72 bp TGCACGTCGCCGTCGGACATCTCGCCAAACGTCTCCTaGTTGTCTTTCATGAGCTTGAAGATGGCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: CTSPSDISPNVS*LSFMSLKMAAS
Trigger: GCTGGCTGCCATCTTCAAGCTCATGAAAGACAACAAGGAGACGTTTGGCGAGATGTCCGACGGCGACGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355797.7
CDS CCA 72 bp ACAGATGATCAGAGGAATGGCCCGGGATGGCCTTGGTaGAAGGAAGAAGTGACTTCAGCTTGCAGGAATGTC +
Preference number: 6 (lower is better)
Translates to: TDDQRNGPGWPW*KEEVTSACRNV
Trigger: GACATTCCTGCAAGCTGAAGTCACTTCTTCCTTCCACCAAGGCCATCCCGGGCCATTCCTCTGATCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589082.1
ENST00000592148.1
CDS CAA 90 bp ATCTATGGCGAAGTGGTGCCTGTGTGTCCTGACGTTTCCCAAATTTaGCACAGCAAAGTATCTCTATGGCTGAGGTCGGAGTGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: IYGEVVPVCPDVSQI*HSKVSLWLRSEWAG
Trigger: GCCTGCCCACTCCGACCTCAGCCATAGAGATACTTTGCTGTGCAAAATTTGGGAAACGTCAGGACACACAGGCACCACTTCGCCATAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS CAA 72 bp GAAGTGGTGCCTGTGTGTCCTGACGTTTCCCAAATTTaGCACAGCAAAGTATCTCTATGGCTGAGGTCGGAG +
Preference number: 6 (lower is better)
Translates to: EVVPVCPDVSQI*HSKVSLWLRSE
Trigger: CTCCGACCTCAGCCATAGAGATACTTTGCTGTGCAAAATTTGGGAAACGTCAGGACACACAGGCACCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS CAA 90 bp TCAAAAGGATTTGCAAGAATATTTGTGGCTCAGGACCTAAGGAACTaGCTACAGGGAAGTGAGGTCAGAGGTCAGCTCAATCCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: SKGFARIFVAQDLRN*LQGSEVRGQLNPLL
Trigger: GAGCAGAGGATTGAGCTGACCTCTGACCTCACTTCCCTGTAGCAAGTTCCTTAGGTCCTGAGCCACAAATATTCTTGCAAATCCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375036.6
ENST00000589082.1
CDS GCA 72 bp GTACACACAGACTTAGTGCTATCTATGGCGAAGTGGTaGCTGTGTGTCCTGACGTTTCCCAAATTTTGCACA +
Preference number: 6 (lower is better)
Translates to: VHTDLVLSMAKW*LCVLTFPKFCT
Trigger: TGTGCAAAATTTGGGAAACGTCAGGACACACAGGCACCACTTCGCCATAGATAGCACTAAGTCTGTGTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592148.1
CDS CCA 72 bp TTTGTACACACAGACTTAGTGCTATCTATGGCGAAGTaGTGCCTGTGTGTCCTGACGTTTCCCAAATTTTGC +
Preference number: 6 (lower is better)
Translates to: FVHTDLVLSMAK*CLCVLTFPKFC
Trigger: GCAAAATTTGGGAAACGTCAGGACACACAGGCACCACTTCGCCATAGATAGCACTAAGTCTGTGTGTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592148.1