Pregenerated sensors for MUSTN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000272573Ensembl transcript IDs: ENST00000446157.3, ENST00000486659.5
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGGGGCCACGTGGGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCGACTGTGGGGGAGGGTaGCAGCCCCAGAGACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: WGHVGILFIGASKVLVQSDCGGG*QPQRQQ Trigger: CTGCTGTCTCTGGGGCTGCCACCCTCCCCCACAGTC...GCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCCACGTGGCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR TCA 90 bp | GGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTGGCGCACACTTCTGTGCGGGTGCGGCTaGACACCGACGGGGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GKGSCFRAFGQQGEWRTLLCGCG*TPTGRP Trigger: CGGCCGCCCCGTCGGTGTTCAGCCGCACCCGCACAG...AAGTGTGCGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | GTTCCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTGGCGCCTGAAGGCGCCTCTCTaGCAGGCAGCAGCTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VPGKGSCFRAFGQQGEWRLKAPL*QAAAAG Trigger: TCCAGCAGCTGCTGCCTGCCAGAGAGGCGCCTTCAG...GCGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446157.3 |
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| CDS-3UTR TCA 90 bp | TGGGGCCACGTGGGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCTGCAGAGCCCTTGGCTaGAGGGCCTGGACTGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: WGHVGILFIGASKVLVQSCRALG*RAWTVG Trigger: CCCCACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCA...GCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCCACGTGGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR GCA 90 bp | TGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCCTGGACTGTGGGGGTTGGTGCTTCCAAGGTaGTGGTGCAGAGCCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: CFQGAGAEPLAEGPGLWGLVLPR*WCRALG Trigger: GCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAA...CCCCCACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | GGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTGGCGCACACTTGGGCAGCAAGGGGAGTaGCGCACACTTCTCAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: GKGSCFRAFGQQGEWRTLGQQGE*RTLLSR Trigger: TCGGCTGAGAAGTGTGCGCCACTCCCCTTGCTGCCC...AAGTGTGCGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | ATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCCTGGACTGTGACTGTGGGGGAGGGTaGCAGCCCCAGAGACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: IGASKVLVQSPWLKGLDCDCGGG*QPQRQQ Trigger: CTGCTGTCTCTGGGGCTGCCACCCTCCCCCACAGTC...ACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | TGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCCTGGACTGTGGGGGCGAAGACACTCTTGGTaGGTCCGGCTTTGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFQGAGAEPLAEGPGLWGRRHSW*VRLWAS Trigger: AGAAGCCCAAAGCCGGACCCACCAAGAGTGTCTTCG...CCCCCACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | AGTTCCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTGGCGCTGGTGCAGAGCCCTTaGCTGAAGGGCCTGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: SSWERLLFPSIRAARGVALVQSP*LKGLDC Trigger: ACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCACCAG...CGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR TCA 90 bp | GGGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAATGCAGAGCCCTTGGCTaGAGGGCCTGGACTGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GHPLYWCFQGAGAEPLAECRALG*RAWTVG Trigger: CCCCACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCA...TTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | GTTCCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTGGCGCCGAAGACACTCTTGGTaGGTCCGGCTTTGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPGKGSCFRAFGQQGEWRRRHSW*VRLWAS Trigger: AGAAGCCCAAAGCCGGACCCACCAAGAGTGTCTTCG...GCGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | TGGGGCCACGTGGGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCTGGTGCAGAGCCCTTaGCTGAAGGGCCTGGACTGT | + |
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Preference number: 4 (lower is better) Translates to: WGHVGILFIGASKVLVQSLVQSP*LKGLDC Trigger: ACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCACCAG...GCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCCACGTGGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR TCA 90 bp | TGGGGCCACGTGGGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCTTGATAGGGGCTTCCTaGGCACCAGCCTGGGACATG | + |
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Preference number: 4 (lower is better) Translates to: WGHVGILFIGASKVLVQSLIGAS*APAWDM Trigger: CATGTCCCAGGCTGGTGCTCAGGAAGCCCCTATCAA...GCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCCACGTGGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446157.3 |
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| CDS-3UTR CCA 90 bp | ATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCGGGCAGCAAGGGGAGTaGCGCACACTTCTCAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: ILFIGASKVLVQSPWLKGGQQGE*RTLLSR Trigger: TCGGCTGAGAAGTGTGCGCCACTCCCCTTGCTGCCC...GCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR TCA 90 bp | ATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCCTGGACTGTGCTCACACTCTCGCATaGCCTGGTAGGTCTTGGACT | + |
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Preference number: 4 (lower is better) Translates to: IGASKVLVQSPWLKGLDCAHTLA*PGRSWT Trigger: AGTCCAAGACCTACCAGGTCATGCGAGAGTGTGAGC...ACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR TCA 90 bp | TGGGGCCACGTGGGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCTTGATAGGGGCTTCCTaGGCACCAGCCGTGGAATAC | + |
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Preference number: 4 (lower is better) Translates to: WGHVGILFIGASKVLVQSLIGAS*APAVEY Trigger: GTATTCCACGGCTGGTGCTCAGGAAGCCCCTATCAA...GCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCCACGTGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | ATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCCTGGACTGTCAGCCTGGGACATGGTaGGTATTGTGTAAGCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IGASKVLVQSPWLKGLDCQPGTW*VLCKRW Trigger: CCAGCGCTTACACAATACCCACCATGTCCCAGGCTG...ACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446157.3 |
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| CDS-3UTR CCA 90 bp | GGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTGGCGCACACTTTGGTGGGTCCGGCTTTaGGCTTCTCAAAGACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GKGSCFRAFGQQGEWRTLWWVRL*ASQRQS Trigger: AGACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCA...AAGTGTGCGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | GTTCCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTGGCGCGGGCATCCTCTTTATTaGTGCTTCCAAGGTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VPGKGSCFRAFGQQGEWRGHPLY*CFQGAG Trigger: ACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCC...GCGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| 3UTR CAA 72 bp | CTTCTGATTGCTGGGGCCACGTGGGCATCCTCTTTATaGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: LLIAGATWASSL*VLPRCWCRALG Trigger: GCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCCACGTGGCCCCAGCAATCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486659.5 |
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| CDS-3UTR TCA 90 bp | GTTCCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTGGCGCGGTAGGTCTTGGACTTaGTTTCCTGGTTCTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VPGKGSCFRAFGQQGEWRGRSWT*FPGSWS Trigger: TGACCAAGAACCAGGAAATCAAGTCCAAGACCTACC...GCGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR GCA 90 bp | ATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCTTGGTGCTTCCAAGGTaGTGGTGCAGAGCCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: ILFIGASKVLVQSPWLKGLVLPR*WCRALG Trigger: GCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAA...GCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR GCA 90 bp | CTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTGGCGCACACCATCCTCTTTATTGGTaGTTCCAAGGTGCTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LGKAPVSEHSGSKGSGAHHPLYW*FQGAGA Trigger: TGCACCAGCACCTTGGAAGCACCAATAAAGAGGATG...GTGTGCGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | ATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCCTGGACTGTTGGTGGGTCCGGCTTTaGGCTTCTCAAAGACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: IGASKVLVQSPWLKGLDCWWVRL*ASQRQS Trigger: AGACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCA...ACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | GGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGAGCCGAAGACACTCTTaGTGGGTCCGGCTTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GILFIGASKVLVQSPWLKSRRHS*WVRLWA Trigger: AGCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCT...CTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | TGGGGCCACGTGGGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTCCAGTTCATGCTTaGGGCTCAGATCAAGACACA | + |
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Preference number: 4 (lower is better) Translates to: WGHVGILFIGASKVLVQSPPVHA*GSDQDT Trigger: TGTGTCTTGATCTGAGCCCCAAGCATGAACTGGAGG...GCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCCACGTGGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | AAAAGAGTTCCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGCCTGAGCACCAGCCGTaGAATACCACCAAAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: KRVPGKGSCFRAFGQQGEPEHQP*NTTKAT Trigger: TGTGGCTTTGGTGGTATTCCACGGCTGGTGCTCAGG...CTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGGAACTCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | GGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGTATTGTGTAAGCGCTaGGTCTCTGAAGGCGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GILFIGASKVLVQSPWLKVLCKR*VSEGAS Trigger: AGAGGCGCCTTCAGAGACCCAGCGCTTACACAATAC...CTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446157.3 |
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| CDS-3UTR CCA 90 bp | CATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGATTGCTGGGGCCACGTaGGCATCCTCTTTATTGGTG | + |
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Preference number: 4 (lower is better) Translates to: HPLYWCFQGAGAEPLAEGIAGAT*ASSLLV Trigger: CACCAATAAAGAGGATGCCCACGTGGCCCCAGCAAT...CCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486659.5 |
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| CDS-3UTR GCA 90 bp | GGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGAGATCAAGACACAGCTaGCAGAGCCGAAAGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GILFIGASKVLVQSPWLKRSRHS*QSRKCP Trigger: TGGACACTTTCGGCTCTGGCAGCTGTGTCTTGATCT...CTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | ATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCGGGCATCCTCTTTATTaGTGCTTCCAAGGTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ILFIGASKVLVQSPWLKGGHPLY*CFQGAG Trigger: ACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCC...GCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR TCA 90 bp | GGGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGTAGGTCTTGGACTTaGTTTCCTGGTTCTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GHPLYWCFQGAGAEPLAEGRSWT*FPGSWS Trigger: TGACCAAGAACCAGGAAATCAAGTCCAAGACCTACC...TTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR GCA 90 bp | ATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCCATCCTCTTTATTGGTaGTTCCAAGGTGCTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ILFIGASKVLVQSPWLKGHPLYW*FQGAGA Trigger: TGCACCAGCACCTTGGAAGCACCAATAAAGAGGATG...GCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | AAAAGAGTTCCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTTGGACTTGATTTCCTaGTTCTTGGTCAGGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: KRVPGKGSCFRAFGQQGELDLIS*FLVRFP Trigger: AGGAAACCTGACCAAGAACCAGGAAATCAAGTCCAA...CTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGGAACTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CCA 90 bp | AAAAAGAGTTCCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGATTGGACTTGATTTCCTaGTTCTTGGTCAGGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: KKSSWERLLFPSIRAARGLDLIS*FLVRFP Trigger: AGGAAACCTGACCAAGAACCAGGAAATCAAGTCCAA...TCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGGAACTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS TCA 90 bp | CTTTGGGCTTCTCAAAGACAGTCTCGGTACCTGTGCGGGTGCGGCTaGACACCGACGGGGCGGCCGAGCCAGCTTGCTCACACTCTCGCA | + |
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Preference number: 5 (lower is better) Translates to: LWASQRQSRYLCGCG*TPTGRPSQLAHTLA Trigger: TGCGAGAGTGTGAGCAAGCTGGCTCGGCCGCCCCGTCGGTGTTCAGCCGCACCCGCACAGGTACCGAGACTGTCTTTGAGAAGCCCAAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CAA 90 bp | CAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCCTGGACTGTGGGGGAGGGTGTTGGTGGGTCCGGCTTaGGGCTTCTCAAAGACAGTC | + |
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Preference number: 5 (lower is better) Translates to: QGAGAEPLAEGPGLWGRVLVGPA*GFSKTV Trigger: GACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCAA...CACCCTCCCCCACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CAA 90 bp | AGTTCCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTGGCGCAGCCGAAGACACTCTaGGTGGGTCCGGCTTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SSWERLLFPSIRAARGVAQPKTL*VGPALG Trigger: GCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCTG...CGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS CCA 90 bp | CCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTaGCGCACACTTCTCAGCCGAAGACACTCTTGGTGGGTCCGGCTT | + |
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Preference number: 5 (lower is better) Translates to: PGKGSCFRAFGQQGE*RTLLSRRHSWWVRL Trigger: AAGCCGGACCCACCAAGAGTGTCTTCGGCTGAGAAGTGTGCGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CAA 90 bp | CAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCCTGGACTGTGGGGGAGGGTGTGGGCATCCTCTTTATaGGTGCTTCCAAGGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: QGAGAEPLAEGPGLWGRVWASSL*VLPRCW Trigger: CCAGCACCTTGGAAGCACCAATAAAGAGGATGCCCA...CACCCTCCCCCACAGTCCAGGCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS CCA 90 bp | CTTCCTGAGCACCAGCCTGGGACATGGTGGGTATTGTGTAAGCGCTaGGTCTCTGAAGGCGCCTCTCTGGCAGGCAGCAGCTGCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: LPEHQPGTWWVLCKR*VSEGASLAGSSCWK Trigger: TTTCCAGCAGCTGCTGCCTGCCAGAGAGGCGCCTTCAGAGACCCAGCGCTTACACAATACCCACCATGTCCCAGGCTGGTGCTCAGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446157.3 |
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| CDS CCA 90 bp | GGGCAGCAAGGGGAGTGGCGCACACTTCTCAGCCGAAGACACTCTTaGTGGGTCCGGCTTTGGGCTTCTCAAAGACAGTCTCGGTACCTG | + |
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Preference number: 5 (lower is better) Translates to: GQQGEWRTLLSRRHS*WVRLWASQRQSRYL Trigger: CAGGTACCGAGACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCTGAGAAGTGTGCGCCACTCCCCTTGCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CAA 90 bp | GTTCCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTGGCGCTTGGTGGGTCCGGCTTaGGGCTTCTCAAAGACAGTC | + |
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Preference number: 5 (lower is better) Translates to: VPGKGSCFRAFGQQGEWRLVGPA*GFSKTV Trigger: GACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCAA...GCGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CAA 90 bp | TTGCTGGGGCCACGTGGGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCACAGCCGAAGACACTCTaGGTGGGTCCGGCTTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: LLGPRGHPLYWCFQGAGAQPKTL*VGPALG Trigger: GCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCTG...TGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCCCACGTGGCCCCAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS CCA 90 bp | CAGCAAGGGGAGTGGCGCACACTTCTCAGCCGAAGACACTCTTGGTaGGTCCGGCTTTGGGCTTCTCAAAGACAGTCTCGGTACCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: QQGEWRTLLSRRHSW*VRLWASQRQSRYLC Trigger: GCACAGGTACCGAGACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCTGAGAAGTGTGCGCCACTCCCCTTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CAA 90 bp | AAAAGAGTTCCTGGGAAAGGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGGGGACATGGTGGGTATaGTGTAAGCGCTGGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: KRVPGKGSCFRAFGQQGEGTWWV*CKRWVS Trigger: AGAGACCCAGCGCTTACACAATACCCACCATGTCCC...CTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCCTTTCCCAGGAACTCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000446157.3 |
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| CDS-3UTR CAA 90 bp | CATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGGCCTCCAGTTCATGCTaGGGGCTCAGATCAAGACAC | + |
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Preference number: 5 (lower is better) Translates to: HPLYWCFQGAGAEPLAEGASSSC*GLRSRH Trigger: GTGTCTTGATCTGAGCCCCAAGCATGAACTGGAGGC...CCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000486659.5 |
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| CDS-3UTR CAA 90 bp | ATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGCTTGATTTCCTGGTTCTaGGTCAGGTTTCCTCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: ILFIGASKVLVQSPWLKGLISWF*VRFPRA Trigger: GGCCCGAGGAAACCTGACCAAGAACCAGGAAATCAA...GCCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CAA 90 bp | CATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGGGTTGATTTCCTGGTTCTaGGTCAGGTTTCCTCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: HPLYWCFQGAGAEPLAEGLISWF*VRFPRA Trigger: GGCCCGAGGAAACCTGACCAAGAACCAGGAAATCAA...CCCTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS-3UTR CAA 90 bp | GGCATCCTCTTTATTGGTGCTTCCAAGGTGCTGGTGCAGAGCCCTTGGCTGAAGTGGGCATCCTCTTTATaGGTGCTTCCAAGGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GILFIGASKVLVQSPWLKWASSL*VLPRCW Trigger: CCAGCACCTTGGAAGCACCAATAAAGAGGATGCCCA...CTTCAGCCAAGGGCTCTGCACCAGCACCTTGGAAGCACCAATAAAGAGGATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS CCA 72 bp | CACCAGCCTGGGACATGGTGGGTATTGTGTAAGCGCTaGGTCTCTGAAGGCGCCTCTCTGGCAGGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HQPGTWWVLCKR*VSEGASLAGSS Trigger: GCTGCTGCCTGCCAGAGAGGCGCCTTCAGAGACCCAGCGCTTACACAATACCCACCATGTCCCAGGCTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446157.3 |
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| CDS CAA 90 bp | GTGGCGCACACTTCTCAGCCGAAGACACTCTTGGTGGGTCCGGCTTaGGGCTTCTCAAAGACAGTCTCGGTACCTGTGCGGGTGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VAHTSQPKTLLVGPA*GFSKTVSVPVRVRL Trigger: CAGCCGCACCCGCACAGGTACCGAGACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCTGAGAAGTGTGCGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS CCA 72 bp | GGCTCCTGTTTCCGAGCATTCGGGCAGCAAGGGGAGTaGCGCACACTTCTCAGCCGAAGACACTCTTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GSCFRAFGQQGE*RTLLSRRHSWW Trigger: CCACCAAGAGTGTCTTCGGCTGAGAAGTGTGCGCCACTCCCCTTGCTGCCCGAATGCTCGGAAACAGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS CAA 90 bp | CGGGCAGCAAGGGGAGTGGCGCACACTTCTCAGCCGAAGACACTCTaGGTGGGTCCGGCTTTGGGCTTCTCAAAGACAGTCTCGGTACCT | + |
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Preference number: 6 (lower is better) Translates to: RAARGVAHTSQPKTL*VGPALGFSKTVSVP Trigger: AGGTACCGAGACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCTGAGAAGTGTGCGCCACTCCCCTTGCTGCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS CAA 72 bp | CCATCTCCCAAGGGCTGCAGAGCCTCCAGTTCATGCTaGGGGCTCAGATCAAGACACAGCTGCCAGAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: PSPKGCRASSSC*GLRSRHSCQSR Trigger: TCGGCTCTGGCAGCTGTGTCTTGATCTGAGCCCCAAGCATGAACTGGAGGCTCTGCAGCCCTTGGGAGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486659.5 |
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| CDS CCA 72 bp | CTTCTCAGCCGAAGACACTCTTGGTGGGTCCGGCTTTaGGCTTCTCAAAGACAGTCTCGGTACCTGTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: LLSRRHSWWVRL*ASQRQSRYLCG Trigger: CCCGCACAGGTACCGAGACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCTGAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS CCA 72 bp | GAGTGGCGCACACTTCTCAGCCGAAGACACTCTTGGTaGGTCCGGCTTTGGGCTTCTCAAAGACAGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: EWRTLLSRRHSW*VRLWASQRQSR Trigger: CCGAGACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCTGAGAAGTGTGCGCCACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS CCA 72 bp | GGGGAGTGGCGCACACTTCTCAGCCGAAGACACTCTTaGTGGGTCCGGCTTTGGGCTTCTCAAAGACAGTCT | + |
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Preference number: 6 (lower is better) Translates to: GEWRTLLSRRHS*WVRLWASQRQS Trigger: AGACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCTGAGAAGTGTGCGCCACTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS CAA 72 bp | AGGGGAGTGGCGCACACTTCTCAGCCGAAGACACTCTaGGTGGGTCCGGCTTTGGGCTTCTCAAAGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: RGVAHTSQPKTL*VGPALGFSKTV Trigger: GACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCTGAGAAGTGTGCGCCACTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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| CDS CAA 72 bp | ACTTCTCAGCCGAAGACACTCTTGGTGGGTCCGGCTTaGGGCTTCTCAAAGACAGTCTCGGTACCTGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: TSQPKTLLVGPA*GFSKTVSVPVR Trigger: CCGCACAGGTACCGAGACTGTCTTTGAGAAGCCCAAAGCCGGACCCACCAAGAGTGTCTTCGGCTGAGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000446157.3 ENST00000486659.5 |
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