RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MUSK (Homo sapiens)

Ensembl gene IDs: ENSG00000030304

Ensembl transcript IDs: ENST00000189978.10, ENST00000374438.1, ENST00000374439.1, ENST00000374440.7, ENST00000374448.9, ENST00000416899.7, ENST00000634612.1

Found 433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCCTTACTGTCGTTGTATCCTACAGAATCTGTTCAGGTCTGAAATaGGAGGAAGGCCAGCTAATAGACAGGGTGGGCAACGGTAGAGGT +
Preference number: 1 (lower is better)
Translates to: RLTVVVSYRICSGLK*EEGQLIDRVGNGRG
Trigger: ACCTCTACCGTTGCCCACCCTGTCTATTAGCTGGCCTTCCTCTCATTTCAGACCTGAACAGATTCTGTAGGATACAACGACAGTAAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CCA 90 bp CACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTGTTaGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGG +
Preference number: 1 (lower is better)
Translates to: HTTHVYSYSFLCGSC*ASGVGFPWLTESER
Trigger: CCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR GCA 90 bp TTTCCAATCACTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTaGACTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCA +
Preference number: 1 (lower is better)
Translates to: FPITGFQWVRLPHGF*TVFALPGKQTTHYS
Trigger: TGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAGTGATTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR CCA 90 bp AAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTaGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGA +
Preference number: 1 (lower is better)
Translates to: KQTTHYSCLLLLFPM*VLLGLWCRIPLAHR
Trigger: TCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR CCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTaGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCC +
Preference number: 1 (lower is better)
Translates to: MGPSTTWVLHCLCSP*EANNTLLMFTLTLS
Trigger: GGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR TCA 90 bp AATAAGAAATGGCAGGTTTCCCACCAAAGATGTCAAGCTGTTACATaGGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCAGACAGC +
Preference number: 1 (lower is better)
Translates to: NKKWQVSHQRCQAVT*GRFGDFRQSFPADS
Trigger: GCTGTCTGCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACATCTTTGGTGGGAAACCTGCCATTTCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CCA 90 bp TGTCTCCATTATCTGACACATTTCCTAGCCTGTGTTTCCAATCACTaGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTT +
Preference number: 1 (lower is better)
Translates to: CLHYLTHFLACVSNH*LSMGPSTTWVLHCL
Trigger: AAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAGTGATTGGAAACACAGGCTAGGAAATGTGTCAGATAATGGAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR TCA 90 bp GTCTCAGTCCTAAATGCTGACCTCGCTATTTATGAACCAGAACTGTaGCTAAGGACCGCCTTACTGTCGTTGTATCCTACAGAATCTGTT +
Preference number: 1 (lower is better)
Translates to: VSVLNADLAIYEPEL*LRTALLSLYPTESV
Trigger: AACAGATTCTGTAGGATACAACGACAGTAAGGCGGTCCTTAGTCACAGTTCTGGTTCATAAATAGCGAGGTCAGCATTTAGGACTGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR TCA 90 bp GACTTGCTGGTGGCCCTCTCCAACTTTTCTGCTTTGTTGGCATCTTaGCTTTCTGCTTTAGACACACGCTGCAACTTTATTCTTTATTCA +
Preference number: 1 (lower is better)
Translates to: DLLVALSNFSALLAS*LSALDTRCNFILYS
Trigger: TGAATAAAGAATAAAGTTGCAGCGTGTGTCTAAAGCAGAAAGTCAAGATGCCAACAAAGCAGAAAAGTTGGAGAGGGCCACCAGCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR GCA 90 bp TTGCAGAGCATACATGAACCATCTAAAATAAGCCATGGATATCTATaGTCAAGTTCTAGACTTGCTGGTGGCCCTCTCCAACTTTTCTGC +
Preference number: 1 (lower is better)
Translates to: LQSIHEPSKISHGYL*SSSRLAGGPLQLFC
Trigger: GCAGAAAAGTTGGAGAGGGCCACCAGCAAGTCTAGAACTTGAGCATAGATATCCATGGCTTATTTTAGATGGTTCATGTATGCTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR TCA 90 bp CAGTTATTGCTTCTATCATGTACAGAGGCTCTACAGTATAGTGGTTaGGAATTCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGT +
Preference number: 1 (lower is better)
Translates to: QLLLLSCTEALQYSG*EFGLFWSKSRLCCC
Trigger: ACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGAATTCTCAACCACTATACTGTAGAGCCTCTGTACATGATAGAAGCAATAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR TCA 90 bp CTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTATaGATAAGAAATGGCAGGTTTCCCACCAAAGATGTCAAGCTGTTA +
Preference number: 1 (lower is better)
Translates to: LGKFLHFCLGCLETL*IRNGRFPTKDVKLL
Trigger: TAACAGCTTGACATCTTTGGTGGGAAACCTGCCATTTCTTATTCATAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR TCA 90 bp TGCTTGAAACGACATGCAAATTACAAATCACTTCCACAGAGTTACTaGGGTTCAGTTATTGCTTCTATCATGTACAGAGGCTCTACAGTA +
Preference number: 1 (lower is better)
Translates to: CLKRHANYKSLPQSY*GSVIASIMYRGSTV
Trigger: TACTGTAGAGCCTCTGTACATGATAGAAGCAATAACTGAACCTCAGTAACTCTGTGGAAGTGATTTGTAATTTGCATGTCGTTTCAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR GCA 90 bp TGCAAATTACAAATCACTTCCACAGAGTTACTGAGGTTCAGTTATTaGTTCTATCATGTACAGAGGCTCTACAGTATAGTGGTTGAGAAT +
Preference number: 1 (lower is better)
Translates to: CKLQITSTELLRFSY*FYHVQRLYSIVVEN
Trigger: ATTCTCAACCACTATACTGTAGAGCCTCTGTACATGATAGAAGCAATAACTGAACCTCAGTAACTCTGTGGAAGTGATTTGTAATTTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR TCA 90 bp CAAGAATTCACACCATTCCTCCAATGCCCTAACTACCAATTAGTCTaGATTAAGATAAGCTGGTATAGAGTAGACTGTTATTTTCTCTTC +
Preference number: 1 (lower is better)
Translates to: QEFTPFLQCPNYQLV*IKISWYRVDCYFLF
Trigger: GAAGAGAAAATAACAGTCTACTCTATACCAGCTTATCTTAATTCAGACTAATTGGTAGTTAGGGCATTGGAGGAATGGTGTGAATTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR CCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAGGTGTAGGATTCCCCTaGCTCACAGAGTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEAGVGFP*LTESER
Trigger: CCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACC...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR-3UTR CCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGGGTGTAGGATTCCCCTaGCTCACAGAGTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKGVGFP*LTESER
Trigger: CCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACC...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR-3UTR TCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCTGGCTCACAGAGTCTaGGAGGAAACTGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKLAHRV*EETAAF
Trigger: AAATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAG...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR-3UTR GCA 90 bp TCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTCTACCACATGGGTTTTaGACTGTCTTTGCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: SASFGQKVGSVAVCTRASLPHGF*TVFALP
Trigger: AGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAG...ACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR TCA 90 bp GGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTTGTGTCAAGCTGTTACATaGGGCAGATTTGGGGATTTC +
Preference number: 2 (lower is better)
Translates to: GLFWSKSRLCCCVHSGQLCQAVT*GRFGDF
Trigger: GAAATCCCCAAATCTGCCTCATGTAACAGCTTGACA...CAACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR TCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGGAATCTGTTCAGGTCTaGAATGAGAGGAAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: TAGALLISVLALGNSDTVESVQV*NERKAS
Trigger: GCTGGCCTTCCTCTCATTTCAGACCTGAACAGATTC...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR CCA 90 bp ATGTCAAGCTGTTACATGAGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCGTCTTGTTGGGCCTCTaGTGTAGGATTCCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: MSSCYMRQIWGFQAEFSSVLLGL*CRIPLA
Trigger: AGCCAGGGGAATCCTACACCAGAGGCCCAACAAGAC...GCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CAA 90 bp GTTTCCAATCACTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTaGCACTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTC +
Preference number: 2 (lower is better)
Translates to: VSNHWLSMGPSTTWV*HCLCSPWEANNTLL
Trigger: GAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAGTGATTGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR CAA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTaGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCT +
Preference number: 2 (lower is better)
Translates to: LAFNGSVYHMGFALS*LSLGSKQHTTHVYS
Trigger: AGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR-3UTR TCA 90 bp GGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTAGAACCCCCAGGAATCTaGGTTCCAGAGCTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: GQSLGKFLHFCLGCLETLEPPGI*VPELLL
Trigger: AAGCAGCAGCTCTGGAACTCAGATTCCTGGGGGTTC...TAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR CCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGTGTGACCAGCTACTTTaGAAACTGAACAGGATGACA +
Preference number: 2 (lower is better)
Translates to: TAGALLISVLALGNSDTVCDQLL*KLNRMT
Trigger: TGTCATCCTGTTCAGTTTCCAAAGTAGCTGGTCACA...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR CCA 90 bp TCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTACTATGAATAAGAAATaGCAGGTTTCCCACCAAAGA +
Preference number: 2 (lower is better)
Translates to: SASFGQKVGSVAVCTRASTMNKK*QVSHQR
Trigger: TCTTTGGTGGGAAACCTGCCATTTCTTATTCATAGT...ACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR TCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCCTGGCTCACAGAGTCTaGGAGGAAACTGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFLAHRV*EETAAF
Trigger: AAATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAG...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR-3UTR TCA 90 bp AGAAAGCCCGAAGCTGTCTTTGAATTTTGCAGAGCATACATGAACCATCTAAAACATTGGCTCTTGGGTTaGAGGGAAGAGGATGTCAGC +
Preference number: 2 (lower is better)
Translates to: RKPEAVFEFCRAYMNHLKHWLLG*REEDVS
Trigger: GCTGACATCCTCTTCCCTTCAACCCAAGAGCCAATG...TTTTAGATGGTTCATGTATGCTCTGCAAAATTCAAAGACAGCTTCGGGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR GCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGGTGCTTGAAACGACATaGAAATTACAAATCACTTCC +
Preference number: 2 (lower is better)
Translates to: TAGALLISVLALGNSDTVVLETT*KLQITS
Trigger: GGAAGTGATTTGTAATTTGCATGTCGTTTCAAGCAC...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR CCA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCAGTCTTGTTGGGCCTCTaGTGTAGGATTCCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSAVLLGL*CRIPLA
Trigger: AGCCAGGGGAATCCTACACCAGAGGCCCAACAAGAC...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR-3UTR CCA 90 bp GGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTACTATGTGGGTCTTGTTaGGCCTCTGGTGTAGGATTC +
Preference number: 2 (lower is better)
Translates to: GQSLGKFLHFCLGCLETLLCGSC*ASGVGF
Trigger: GAATCCTACACCAGAGGCCCAACAAGACCCACATAG...TAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CAA 90 bp AGACTTGCTGGTGGCCCTCTCCAACTTTTCTGCTTTGTTGGCATCTaGACTTTCTGCTTTAGACACACGCTGCAACTTTATTCTTTATTC +
Preference number: 2 (lower is better)
Translates to: RLAGGPLQLFCFVGI*TFCFRHTLQLYSLF
Trigger: GAATAAAGAATAAAGTTGCAGCGTGTGTCTAAAGCAGAAAGTCAAGATGCCAACAAAGCAGAAAAGTTGGAGAGGGCCACCAGCAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR GCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCCTACCACATGGGTTTTaGACTGTCTTTGCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLLPHGF*TVFALP
Trigger: AGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAG...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR CAA 90 bp GGGTGTCATGTGAAAAATACTCTGGTATCTTACCATGTTTGGTATTaGATCACTAAAAATGACTGCTGGTGCCTTACTGATATCTGTCCT +
Preference number: 2 (lower is better)
Translates to: GCHVKNTLVSYHVWY*ITKNDCWCLTDICP
Trigger: AGGACAGATATCAGTAAGGCACCAGCAGTCATTTTTAGTGATCAAATACCAAACATGGTAAGATACCAGAGTATTTTTCACATGACACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CAA 90 bp AGAGTAGACTGTTATTTTCTCTTCCCTGTTCGTTTTCAGGAGAATTaGGGTTCCTGCTATATCAGAAATAAACTCAGATCATGTATGGAC +
Preference number: 2 (lower is better)
Translates to: RVDCYFLFPVRFQEN*GSCYIRNKLRSCMD
Trigger: GTCCATACATGATCTGAGTTTATTTCTGATATAGCAGGAACCCAAATTCTCCTGAAAACGAACAGGGAAGAGAAAATAACAGTCTACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR GCA 90 bp AGAAAGCCCGAAGCTGTCTTTGAATTTTGCAGAGCATACATGAACCATCTAAAAAGTCTGAGAGGAAACTaGAGCATTTTATTTGAACGT +
Preference number: 2 (lower is better)
Translates to: RKPEAVFEFCRAYMNHLKSLRGN*SILFER
Trigger: ACGTTCAAATAAAATGCTGCAGTTTCCTCTCAGACT...TTTTAGATGGTTCATGTATGCTCTGCAAAATTCAAAGACAGCTTCGGGCTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR-3UTR CAA 90 bp GGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTTGCCTATGTGGGTCTTGTaGGGCCTCTGGTGTAGGATT +
Preference number: 3 (lower is better)
Translates to: GLFWSKSRLCCCVHSGQLPMWVL*GLWCRI
Trigger: AATCCTACACCAGAGGCCCAACAAGACCCACATAGG...CAACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CCA 72 bp TGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTaGCTCACAGAGTCTGAGAGGAAACTGCAGCATTTT +
Preference number: 3 (lower is better)
Translates to: CGSCWASGVGFP*LTESERKLQHF
Trigger: AAAATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR-3UTR CAA 90 bp GGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTTGACCGCCTTACTGTCGTaGTATCCTACAGAATCTGTT +
Preference number: 3 (lower is better)
Translates to: GLFWSKSRLCCCVHSGQLTALLS*YPTESV
Trigger: AACAGATTCTGTAGGATACAACGACAGTAAGGCGGT...CAACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR GCA 72 bp ACTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTaGACTGTCTTTGCTCTCCCTGGGAAGCAAACAACA +
Preference number: 3 (lower is better)
Translates to: TGFQWVRLPHGF*TVFALPGKQTT
Trigger: TGTTGTTTGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR CCA 72 bp CATGTTTACTCTTACTCTTTCCTATGTGGGTCTTGTTaGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAG +
Preference number: 3 (lower is better)
Translates to: HVYSYSFLCGSC*ASGVGFPWLTE
Trigger: CTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGGAAAGAGTAAGAGTAAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR CCA 72 bp ACACACTACTCATGTTTACTCTTACTCTTTCCTATGTaGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTG +
Preference number: 3 (lower is better)
Translates to: THYSCLLLLFPM*VLLGLWCRIPL
Trigger: CAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR-3UTR CAA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCTTTCCTATGTGGGTCTaGTTGGGCCTCTGGTGTAGG +
Preference number: 3 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLFPMWV*LGLWCR
Trigger: CCTACACCAGAGGCCCAACAAGACCCACATAGGAAA...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR TCA 72 bp CTAAATGCTGACCTCGCTATTTATGAACCAGAACTGTaGCTAAGGACCGCCTTACTGTCGTTGTATCCTACA +
Preference number: 3 (lower is better)
Translates to: LNADLAIYEPEL*LRTALLSLYPT
Trigger: TGTAGGATACAACGACAGTAAGGCGGTCCTTAGTCACAGTTCTGGTTCATAAATAGCGAGGTCAGCATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CCA 72 bp TCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTaGGAAGCAAACAACACACTACTCATGTTTACTCTT +
Preference number: 3 (lower is better)
Translates to: STTWVLHCLCSP*EANNTLLMFTL
Trigger: AAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR TCA 72 bp CAGGACAGAAAAGGGAACTCAGAGTTACAGGCTTGCTaGTTTGCTGTTTCATTCCTTAGAAACCCTCTATCA +
Preference number: 3 (lower is better)
Translates to: QDRKGNSELQAC*FAVSFLRNPLS
Trigger: TGATAGAGGGTTTCTAAGGAATGAAACAGCAAATCAGCAAGCCTGTAACTCTGAGTTCCCTTTTCTGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR TCA 72 bp CTTCTATCATGTACAGAGGCTCTACAGTATAGTGGTTaGGAATTCGGCCTCTTTTGGTCAAAAAGTAGGCTC +
Preference number: 3 (lower is better)
Translates to: LLSCTEALQYSG*EFGLFWSKSRL
Trigger: GAGCCTACTTTTTGACCAAAAGAGGCCGAATTCTCAACCACTATACTGTAGAGCCTCTGTACATGATAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CCA 72 bp TTGTCTTGGTTGCCTGGAGACACTATGAATAAGAAATaGCAGGTTTCCCACCAAAGATGTCAAGCTGTTACA +
Preference number: 3 (lower is better)
Translates to: LSWLPGDTMNKK*QVSHQRCQAVT
Trigger: TGTAACAGCTTGACATCTTTGGTGGGAAACCTGCCATTTCTTATTCATAGTGTCTCCAGGCAACCAAGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR GCA 72 bp ATACATGAACCATCTAAAATAAGCCATGGATATCTATaGTCAAGTTCTAGACTTGCTGGTGGCCCTCTCCAA +
Preference number: 3 (lower is better)
Translates to: IHEPSKISHGYL*SSSRLAGGPLQ
Trigger: TTGGAGAGGGCCACCAGCAAGTCTAGAACTTGAGCATAGATATCCATGGCTTATTTTAGATGGTTCATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR GCA 72 bp TCTTACCATGTTTGGTATTTGATCACTAAAAATGACTaGTGGTGCCTTACTGATATCTGTCCTGGCACTTGG +
Preference number: 3 (lower is better)
Translates to: SYHVWYLITKND*WCLTDICPGTW
Trigger: CCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGTCATTTTTAGTGATCAAATACCAAACATGGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR TCA 72 bp CGACATGCAAATTACAAATCACTTCCACAGAGTTACTaGGGTTCAGTTATTGCTTCTATCATGTACAGAGGC +
Preference number: 3 (lower is better)
Translates to: RHANYKSLPQSY*GSVIASIMYRG
Trigger: GCCTCTGTACATGATAGAAGCAATAACTGAACCTCAGTAACTCTGTGGAAGTGATTTGTAATTTGCATGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR GCA 72 bp CAAATCACTTCCACAGAGTTACTGAGGTTCAGTTATTaGTTCTATCATGTACAGAGGCTCTACAGTATAGTG +
Preference number: 3 (lower is better)
Translates to: QITSTELLRFSY*FYHVQRLYSIV
Trigger: CACTATACTGTAGAGCCTCTGTACATGATAGAAGCAATAACTGAACCTCAGTAACTCTGTGGAAGTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CCA 72 bp AGGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTaGTTGCCTGGAGACACTATGAATAAGAAATGGCAG +
Preference number: 3 (lower is better)
Translates to: RAKSRKISTFLS*LPGDTMNKKWQ
Trigger: CTGCCATTTCTTATTCATAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR TCA 72 bp ACACCATTCCTCCAATGCCCTAACTACCAATTAGTCTaGATTAAGATAAGCTGGTATAGAGTAGACTGTTAT +
Preference number: 3 (lower is better)
Translates to: TPFLQCPNYQLV*IKISWYRVDCY
Trigger: ATAACAGTCTACTCTATACCAGCTTATCTTAATTCAGACTAATTGGTAGTTAGGGCATTGGAGGAATGGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CCA 72 bp TGTCATGTGAAAAATACTCTGGTATCTTACCATGTTTaGTATTTGATCACTAAAAATGACTGCTGGTGCCTT +
Preference number: 3 (lower is better)
Translates to: CHVKNTLVSYHV*YLITKNDCWCL
Trigger: AAGGCACCAGCAGTCATTTTTAGTGATCAAATACCAAACATGGTAAGATACCAGAGTATTTTTCACATGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATAGGCTGCACACGGTGTaGGGGGACATGCTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHRLHTV*GDMLRR
Trigger: CCTCCGCAGCATGTCCCCTCACACCGTGTGCAGCCT...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCCTAGATGTGGCAGTCTaGCACAGGCCGTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVLDVAV*HRPWGP
Trigger: GGGACCCCACGGCCTGTGCCAGACTGCCACATCTAG...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCATGCCAGCTGCCACCTaGCTGGCAATGCAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVMPAAT*LAMQSC
Trigger: GCAGCTTTGCATTGCCAGGCAGGTGGCAGCTGGCAT...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTCCATTCTGCTATGCTaGTGGTGGCTGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVSILLC*WWLQPW
Trigger: CCAAGGCTGCAGCCACCATCAGCATAGCAGAATGGA...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCCTCGCACGTAGTAAATaGCCTCCTCATGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVLARSK*PPHGPS
Trigger: GGATGGCCCATGAGGAGGTCATTTACTACGTGCGAG...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCACTGAGAGGTAAGCCATaGCAGCTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEALRGKP*QLPPAW
Trigger: CCAGGCAGGTGGCAGCTGGCATGGCTTACCTCTCAG...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATAGGGCTGCCTCCCTCTaGAAGTCCGCTTGCATATCT +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHRAASL*KSACIS
Trigger: AGATATGCAAGCGGACTTTCAGAGGGAGGCAGCCCT...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGTTCTGCCATGAGGGCTaGCTCCCTCTGAAAGTCCGC +
Preference number: 4 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKFCHEG*LPLKVR
Trigger: GCGGACTTTCAGAGGGAGGCAGCCCTCATGGCAGAA...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCACCACCTGCCTGGCAATaGAAAGCTGCTCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEAPPAWQ*KAAQHR
Trigger: CCTGTGCTGAGCAGCTTTGCATTGCCAGGCAGGTGG...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGGTCTGGCACAGGCCGTaGGGTCCCAATGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: TAGALLISVLALGNSDTVVWHRP*GPNACW
Trigger: CCAGCATGCATTGGGACCCCACGGCCTGTGCCAGAC...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATGGTGTAGGATTCCCCTaGCTCACAGAGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHGVGFP*LTESER
Trigger: CCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACC...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGCCACACTCAGGATGGTaGGGAGCTGCCCATTCTCCC +
Preference number: 4 (lower is better)
Translates to: TAGALLISVLALGNSDTVPHSGW*GAAHSP
Trigger: GGGAGAATGGGCAGCTCCTCACCATCCTGAGTGTGG...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCCAGCCTTGGCAGTACTaGACTTCTCCCCATGCTTAT +
Preference number: 4 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVQPWQY*TSPHAY
Trigger: ATAAGCATGGGGAGAAGTTCAGTACTGCCAAGGCTG...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATCATTGGCTCTTGGGTTaGAGGGAAGAGGATGTCAGC +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHHWLLG*REEDVS
Trigger: GCTGACATCCTCTTCCCTTCAACCCAAGAGCCAATG...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGGCCCATTCTCCCGGATaGTGTACCGGGTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKAHSPG*CTGCQR
Trigger: TCTTTGACACCCGGTACAGCATCCGGGAGAATGGGC...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGAGCTGGCCGGCAGACTaGGCTCACTACTTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKSWPAD*AHYFQF
Trigger: GAACTGAAAGTAGTGAGCCCAGTCTGCCGGCCAGCT...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTGTCTTGTTGGGCCTCTaGTGTAGGATTCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SASFGQKVGSVAVCTRASVLLGL*CRIPLA
Trigger: AGCCAGGGGAATCCTACACCAGAGGCCCAACAAGAC...ACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATCAAAGGAGCCAAAGGTaGCATTGTGGGATTCAGGAG +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHQRSQR*HCGIQE
Trigger: CTCCTGAATCCCACAATGTCACCTTTGGCTCCTTTG...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCACAAGTCACTGTGACTaGGGCTGCACACGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSTSHCD*GCTRCE
Trigger: CTCACACCGTGTGCAGCCTCAGTCACAGTGACTTGT...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGCCAGGGCTGGAGACCTaGGCCCTCATAGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: TAGALLISVLALGNSDTVPGLET*ALIDKS
Trigger: TGACTTGTCTATGAGGGCTCAGGTCTCCAGCCCTGG...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATCTGGCTCACAGAGTCTaGGAGGAAACTGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHLAHRV*EETAAF
Trigger: AAATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAG...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTGAAACTGGGTCTGTCTaGAGGCAGCTTGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: SASFGQKVGSVAVCTRASETGSV*RQLAPT
Trigger: TGTTGGAGCAAGCTGCCTGCAGACAGACCCAGTTTC...ACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAACTCACAGTTCCCTCTaGCCTCTCACACATGCGTTC +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEATHSSL*PLTHAF
Trigger: GAACGCATGTGTGAGAGGGCAGAGGGAACTGTGAGT...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAGGTCCCAATGCATGCTaGGAAGCTTGCTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEAGPNAC*EACCIL
Trigger: CAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACC...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTAAAGAGCAGGCACATTaGCTTCCCGACAGCACACAC +
Preference number: 4 (lower is better)
Translates to: SASFGQKVGSVAVCTRASKEQAH*LPDSTH
Trigger: GTGTGTGCTGTCGGGAAGCCAATGTGCCTGCTCTTT...ACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATCTGAGTAGATGTTCCTaGAGAGGCCAAAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHLSRCS*RGQSRQ
Trigger: TTGCCGACTTTGGCCTCTCCAGGAACATCTACTCAG...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGGAGCCCGCAGGATCCTaGCAAAAACCTCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKEPAGS*QKPQLP
Trigger: TGGAAGTTGAGGTTTTTGCCAGGATCCTGCGGGCTC...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATATCACTGGCTTTCAATaGGTCCGTCTACCACATGGG +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHITGFQ*VRLPHG
Trigger: CCCATGTGGTAGACGGACCCATTGAAAGCCAGTGAT...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGTTCGGGAATTTTCCCTaGGAGGGCTGTCTCCCTTTA +
Preference number: 4 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKFGNFP*EGCLPL
Trigger: TAAAGGGAGACAGCCCTCTCAGGGAAAATTCCCGAA...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCATCCAACATAGACGCATaGGATTGTACAGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEASNIDA*DCTAPR
Trigger: CCGTGGAGCTGTACAATCTCATGCGTCTATGTTGGA...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCCCGCATAGGAGGTGTTaGGAAAAACAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVPHRRC*EKQEHL
Trigger: AAGATGCTCTTGTTTTTCTCAACACCTCCTATGCGG...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTGAATCTGTTCAGGTCTaGAATGAGAGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SASFGQKVGSVAVCTRASESVQV*NERKAS
Trigger: GCTGGCCTTCCTCTCATTTCAGACCTGAACAGATTC...ACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATTATGAACCAGAACTGTaGCTAAGGACCGCCTTACTG +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHYEPEL*LRTALL
Trigger: CAGTAAGGCGGTCCTTAGTCACAGTTCTGGTTCATA...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGCTGGTGCCTTACTaGTATCTGTCCTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSLLVPY*YLSWHL
Trigger: CAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAG...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTACCAGCCATTCTTTTaGGCAGAAGAGCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVYQPFF*AEELLY
Trigger: GTAAAGGAGCTCTTCTGCGCAAAAGAATGGCTGGTA...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCTGGGGTCCCAATGCATaGTGGGAAGCTTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSWGPNA*WEACCI
Trigger: AATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCA...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAGGCAGGAGAGGATGTTaGCATCTCGCACGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEAGRRGC*HLARSK
Trigger: TTTACTACGTGCGAGATGGCAACATCCTCTCCTGCC...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATTGGTTTACTCCATTCTaGTATGCTGATGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHWFTPF*YADGGC
Trigger: GCAGCCACCATCAGCATAGCAGAATGGAGTAAACCA...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATATCTTTTGCCAGGACTaGATTACACACCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHIFCQD*ITHLPS
Trigger: AGAGGGGAGGTGTGTAATGCAGTCCTGGCAAAAGAT...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGCCAAAGGTGACATTGTaGGATTCAGGAGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TAGALLISVLALGNSDTVPKVTL*DSGARR
Trigger: CCTGCGGGCTCCTGAATCCCACAATGTCACCTTTGG...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCTGAGTAGATGTTCCTaGAGAGGCCAAAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKLSRCS*RGQSRQ
Trigger: TTGCCGACTTTGGCCTCTCCAGGAACATCTACTCAG...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCAAAAATGGACTCTGGTaGCATCCAACGGATAGGGAT +
Preference number: 4 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVKNGLW*HPTDRD
Trigger: ATCCCTATCCGTTGGATGCCACCAGAGTCCATTTTT...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTCAAAGCCTCAGCAGCTaGCCGGCAGACTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPQSLSS*PADWAH
Trigger: GTGAGCCCAGTCTGCCGGCCAGCTGCTGAGGCTTTG...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCCAGGACTGCACTCCTaGAAGATGTGGTTACACAAC +
Preference number: 4 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKPGLHS*KMWLHN
Trigger: GTTGTGTAACCACATCTTCCAGGAGTGCAGTCCTGG...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGGGTCCGTCTACCACATaGGTTTTGCACTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKGPSTT*VLHCLC
Trigger: GCAAAGACAGTGCAAAACCCATGTGGTAGACGGACC...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGCAGAAGGCAGTGTGGTaGGGGTTACTGCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: TAGALLISVLALGNSDTVQKAVW*GLLLLI
Trigger: AATCAGCAGCAGTAACCCTCACCACACTGCCTTCTG...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATTACATGGGGTTGGGATaGAGTCTATCTAGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHYMGLG*SLSSKS
Trigger: GCTCTTACTAGATAGACTTCATCCCAACCCCATGTA...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCCGAGGCTTCTTCTTTaGGCATCTTTACTGCCACCA +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSPRLLL*ASLLPP
Trigger: TGGTGGCAGTAAAGATGCTCAAAGAAGAAGCCTCGG...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCTCCAACATAGACGCATaGGATTGTACAGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSSNIDA*DCTAPR
Trigger: CCGTGGAGCTGTACAATCTCATGCGTCTATGTTGGA...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCGTTCCAGAATTCGGTaGATACTGGTGAAACTGGGT +
Preference number: 4 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKRSRIR*ILVKLG
Trigger: ACCCAGTTTCACCAGTATTCACCGAATTCTGGAACG...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATCAGAGCTTTACTCTGTaGCCAGCTACTTTGGAAACT +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHQSFTL*PATLET
Trigger: AGTTTCCAAAGTAGCTGGTCACAGAGTAAAGCTCTG...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCTGCACAATCTCTCTGTaGCTGTTGGAGGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSCTISL*LLEAEL
Trigger: AAGCTCAGCCTCCAACAGTCACAGAGAGATTGTGCA...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCACCATTGTTGGCCGTaGAGCAGTAAATGCCATCAT +
Preference number: 4 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKHHCWP*SSKCHH
Trigger: ATGATGGCATTTACTGCTGCACGGCCAACAATGGTG...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGGACAGGAATGCCTGTTaGTGTACAGTGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TAGALLISVLALGNSDTVDRNAC*CTVQGH
Trigger: GTGACCCTGCACTGTACAGCAACAGGCATTCCTGTC...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTGCCGTGGGGTCCCAATaGATGCTGGGAAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPAVGSQ*MLGSLL
Trigger: CAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGC...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp ATGTCAAGCTGTTACATGAGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCGTAAGCCATGCCAGCTaGCACCTGCCTGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: MSSCYMRQIWGFQAEFSSVSHAS*HLPGNA
Trigger: TGCATTGCCAGGCAGGTGGCAGCTGGCATGGCTTAC...GCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCGGCAGGAGAGGATGTTaGCATCTCGCACGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSGRRGC*HLARSK
Trigger: TTTACTACGTGCGAGATGGCAACATCCTCTCCTGCC...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGCCCTCTCACACATaGGTTCCAGAATTCGGTGAA +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSLPSHT*VPEFGE
Trigger: TTCACCGAATTCTGGAACGCATGTGTGAGAGGGCAG...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTCACACTCTCTTGAATaGACCCAGAAGAAACAGCAT +
Preference number: 4 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVSHSLE*TQKKQH
Trigger: ATGCTGTTTCTTCTGGGTCCATTCAAGAGAGTGTGA...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAGCATGTGTAGAGTCCTaGCTTGGTGATAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEAACVES*LGDKQL
Trigger: CAGCTGTTTATCACCAAGCCAGGACTCTACACATGC...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCGTCTGGCACAGGCCGTaGGGTCCCAATGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFVWHRP*GPNACW
Trigger: CCAGCATGCATTGGGACCCCACGGCCTGTGCCAGAC...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATAAAAATGGACTCTGGTaGCATCCAACGGATAGGGAT +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHKNGLW*HPTDRD
Trigger: ATCCCTATCCGTTGGATGCCACCAGAGTCCATTTTT...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTGGACGAAGTTCCTTCTaGACAACGCAAGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: SASFGQKVGSVAVCTRASGRSSF*TTQGKW
Trigger: CCATTTTCCTTGCGTTGTCCAGAAGGAACTTCGTCC...ACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTGGACCAGTAGCTCTTaGGCCTCCTCAGGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYWTSSS*ASSGSA
Trigger: TGCGGACCCTGAGGAGGCCCAAGAGCTACTGGTCCA...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATCACTCCTGGAAGATGTaGTTACACAACAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHHSWKM*LHNKAS
Trigger: TGAGGCTTTGTTGTGTAACCACATCTTCCAGGAGTG...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCATTACTCTTTCCTATGTaGGTCTTGTTGGGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEALLFPM*VLLGLW
Trigger: CCAGAGGCCCAACAAGACCCACATAGGAAAGAGTAA...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCCCACACTCAGGATGGTaGGGAGCTGCCCATTCTCCC +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFPHSGW*GAAHSP
Trigger: GGGAGAATGGGCAGCTCCTCACCATCCTGAGTGTGG...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTTGTACATGGGGTTGGGATaGAGTCTATCTAGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: GLFWSKSRLCCCVHSGQLYMGLG*SLSSKS
Trigger: GCTCTTACTAGATAGACTTCATCCCAACCCCATGTA...CAACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGCCGAGGCTTCTTCTTTaGGCATCTTTACTGCCACCA +
Preference number: 4 (lower is better)
Translates to: TAGALLISVLALGNSDTVPRLLL*ASLLPP
Trigger: TGGTGGCAGTAAAGATGCTCAAAGAAGAAGCCTCGG...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCAGGCTGCACACGGTGTaGGGGGACATGCTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLRLHTV*GDMLRR
Trigger: CCTCCGCAGCATGTCCCCTCACACCGTGTGCAGCCT...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACCCAGGGCTGGAGACCTaGGCCCTCATAGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYPGLET*ALIDKS
Trigger: TGACTTGTCTATGAGGGCTCAGGTCTCCAGCCCTGG...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCATGTTCAGGTCTGAAATaGGAGGAAGGCCAGCTAATA +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEACSGLK*EEGQLI
Trigger: TATTAGCTGGCCTTCCTCTCATTTCAGACCTGAACA...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCACCACTTTGGAATATaGTGTCCCGAGGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKHHFGI*CPEAVF
Trigger: AAAAACAGCCTCGGGACAGCATATTCCAAAGTGGTG...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAGATGACAGGAGCTTTTaGAAGTTTCTCAGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEADDRSF*KFLSSA
Trigger: AGCGGAACTGAGAAACTTCCAAAAGCTCCTGTCATC...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCTAGATGTGGCAGTCTaGCACAGGCCGTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLLDVAV*HRPWGP
Trigger: GGGACCCCACGGCCTGTGCCAGACTGCCACATCTAG...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCGGAGGAAGGCAGATTTaGAATGTCCACACTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSGGRQI*NVHTWL
Trigger: AAGCCAAGTGTGGACATTCCAAATCTGCCTTCCTCC...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCTGGACCAGTAGCTCTTaGGCCTCCTCAGGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFWTSSS*ASSGSA
Trigger: TGCGGACCCTGAGGAGGCCCAAGAGCTACTGGTCCA...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCATTCCAGGCCGTGTaGACCAGTAGCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYSFQAV*TSSSWA
Trigger: GGCCCAAGAGCTACTGGTCCACACGGCCTGGAATGA...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTCAAAGCCTCAGCAGCTaGCCGGCAGACTGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCQSLSS*PADWAH
Trigger: GTGAGCCCAGTCTGCCGGCCAGCTGCTGAGGCTTTG...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTTGTCTTTGCTCTCCCTaGGAAGCAAACAACACACTA +
Preference number: 4 (lower is better)
Translates to: SASFGQKVGSVAVCTRASCLCSP*EANNTL
Trigger: TAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACA...ACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACAGGGCTGCCTCCCTCTaGAAGTCCGCTTGCATATCT +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYRAASL*KSACIS
Trigger: AGATATGCAAGCGGACTTTCAGAGGGAGGCAGCCCT...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTGAACCCCCAGGAATCTaGGTTCCAGAGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPEPPGI*VPELLL
Trigger: AAGCAGCAGCTCTGGAACTCAGATTCCTGGGGGTTC...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTGTGACTGTTGGAGGCTaGGCTTGCAGTGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPVTVGG*ACSEPR
Trigger: TCTTGGCTCACTGCAAGCTCAGCCTCCAACAGTCAC...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATGCATCTATACTCCTGTaGTTCAGAACATTAGATCGA +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHASILL*FRTLDR
Trigger: TCGATCTAATGTTCTGAATCACAGGAGTATAGATGC...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCTACCAGCCATTCTTTTaGGCAGAAGAGCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSYQPFF*AEELLY
Trigger: GTAAAGGAGCTCTTCTGCGCAAAAGAATGGCTGGTA...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTTGCTGGGAAGCTTGCTaGATTCTGGCACGGACAGCA +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPCWEAC*ILARTA
Trigger: TGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCA...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACGCATGCTGGGAAGCTTaGTGCATTCTGGCACGGACA +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYACWEA*CILART
Trigger: TGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGC...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTAGCCGTGGGGTCCCAATaGATGCTGGGAAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GQSLGKFLHFCLGCLETLAVGSQ*MLGSLL
Trigger: CAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGC...TAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCAAGAAGCACAAATATTaGAAAGCTGGACATGATGGA +
Preference number: 4 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVKKHKY*KAGHDG
Trigger: TCCATCATGTCCAGCTTTGCAATATTTGTGCTTCTT...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCTTCTGCCATGAGGGCTaGCTCCCTCTGAAAGTCCGC +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFFCHEG*LPLKVR
Trigger: GCGGACTTTCAGAGGGAGGCAGCCCTCATGGCAGAA...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCGTAAGCCATGCCAGCTaGCACCTGCCTGGCAATGCA +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFVSHAS*HLPGNA
Trigger: TGCATTGCCAGGCAGGTGGCAGCTGGCATGGCTTAC...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTACACCATTCCTCCAATaGCCTAACTACCAATTAGTC +
Preference number: 4 (lower is better)
Translates to: SASFGQKVGSVAVCTRASTPFLQ*PNYQLV
Trigger: GACTAATTGGTAGTTAGGGCATTGGAGGAATGGTGT...ACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATAAGAATATGTACCAGTaGAATGTTGACGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHKNMYQ*NVDELS
Trigger: AGAGAGCTCGTCAACATTCCACTGGTACATATTCTT...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTCCAAAGGTGACATTGTaGGATTCAGGAGCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPPKVTL*DSGARR
Trigger: CCTGCGGGCTCCTGAATCCCACAATGTCACCTTTGG...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp ATGTCAAGCTGTTACATGAGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCGGTCCCAATGCATGCTaGGAAGCTTGCTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: MSSCYMRQIWGFQAEFSSGPNAC*EACCIL
Trigger: CAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACC...GCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp ATGTCAAGCTGTTACATGAGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCGAGCCCGCAGGATCCTaGCAAAAACCTCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: MSSCYMRQIWGFQAEFSSEPAGS*QKPQLP
Trigger: TGGAAGTTGAGGTTTTTGCCAGGATCCTGCGGGCTC...GCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCTCATTCCAGGCCGTGTaGACCAGTAGCTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFSFQAV*TSSSWA
Trigger: GGCCCAAGAGCTACTGGTCCACACGGCCTGGAATGA...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCTGTCTTTGCTCTCCCTaGGAAGCAAACAACACACTA +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSCLCSP*EANNTL
Trigger: TAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACA...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR CAA 72 bp TCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTGTaGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SCLLLLFPMWVL*GLWCRIPLAHR
Trigger: TCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGGAAAGAGTAAGAGTAAACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR CAA 72 bp TACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTaGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: YSCLLLLFPMWV*LGLWCRIPLAH
Trigger: GTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTGTCCACACTTGGCTTTaGGGACGTCATTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPVHTWL*GRHWWE
Trigger: TTCCCACCAATGACGTCCTCAAAGCCAAGTGTGGAC...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACGTCCACACTTGGCTTTaGGGACGTCATTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYVHTWL*GRHWWE
Trigger: TTCCCACCAATGACGTCCTCAAAGCCAAGTGTGGAC...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp ATGTCAAGCTGTTACATGAGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCTTCGGTGAATACTGGTaGAACTGGGTCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: MSSCYMRQIWGFQAEFSSFGEYW*NWVCLQ
Trigger: CTGCAGACAGACCCAGTTTCACCAGTATTCACCGAA...GCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp TCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTCCTAAGTGTCTTACATaGCGATTAAGCTACTTTCAC +
Preference number: 4 (lower is better)
Translates to: SASFGQKVGSVAVCTRASPKCLT*RLSYFH
Trigger: GTGAAAGTAGCTTAATCGTCATGTAAGACACTTAGG...ACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp GGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTTGACCTACCTGTCTATCTaGAAAAGCCTGGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: GLFWSKSRLCCCVHSGQLTYLSI*KSLEEY
Trigger: ATATTCTTCCAGGCTTTTTCAGATAGACAGGTAGGT...CAACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCGCCCATTCTCCCGGATaGTGTACCGGGTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFAHSPG*CTGCQR
Trigger: TCTTTGACACCCGGTACAGCATCCGGGAGAATGGGC...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACGACAGGAATGCCTGTTaGTGTACAGTGCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYDRNAC*CTVQGH
Trigger: GTGACCCTGCACTGTACAGCAACAGGCATTCCTGTC...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCTGCTGGGAAGCTTGCTaGATTCTGGCACGGACAGCA +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFCWEAC*ILARTA
Trigger: TGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCA...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTATGCCAGCTGCCACCTaGCTGGCAATGCAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLMPAAT*LAMQSC
Trigger: GCAGCTTTGCATTGCCAGGCAGGTGGCAGCTGGCAT...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCCTGAGAGGTAAGCCATaGCAGCTGCCACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLLRGKP*QLPPAW
Trigger: CCAGGCAGGTGGCAGCTGGCATGGCTTACCTCTCAG...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACGCACTACTCCAGGACTaGACTCCTGGAAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYALLQD*TPGRCG
Trigger: ACCACATCTTCCAGGAGTGCAGTCCTGGAGTAGTGC...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATAGTCTGAGAGGAAACTaGAGCATTTTATTTGAACGT +
Preference number: 4 (lower is better)
Translates to: ASGVGFPWLTESERKLQHSLRGN*SILFER
Trigger: ACGTTCAAATAAAATGCTGCAGTTTCCTCTCAGACT...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAAAGAATATGTACCAGTaGAATGTTGACGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEAKNMYQ*NVDELS
Trigger: AGAGAGCTCGTCAACATTCCACTGGTACATATTCTT...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACCCAGCTTCACCACTTTaGAATATGCTGTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYPASPL*NMLSRG
Trigger: GCCTCGGGACAGCATATTCCAAAGTGGTGAAGCTGG...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCTCACACTCTCTTGAATaGACCCAGAAGAAACAGCAT +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSSHSLE*TQKKQH
Trigger: ATGCTGTTTCTTCTGGGTCCATTCAAGAGAGTGTGA...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCATTCAATGTTATTCCTTaGATACTCCAGGCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEAFNVIP*ILQAEQ
Trigger: TTGCTCAGCCTGGAGTATCCAAGGAATAACATTGAA...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACCAGCCTTGGCAGTACTaGACTTCTCCCCATGCTTAT +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYQPWQY*TSPHAY
Trigger: ATAAGCATGGGGAGAAGTTCAGTACTGCCAAGGCTG...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTTCCATTCTGCTATGCTaGTGGTGGCTGCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCSILLC*WWLQPW
Trigger: CCAAGGCTGCAGCCACCATCAGCATAGCAGAATGGA...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCCAGAAGGCAGTGTGGTaGGGGTTACTGCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFQKAVW*GLLLLI
Trigger: AATCAGCAGCAGTAACCCTCACCACACTGCCTTCTG...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTAACAAGTCACTGTGACTaGGGCTGCACACGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GQSLGKFLHFCLGCLETLTSHCD*GCTRCE
Trigger: CTCACACCGTGTGCAGCCTCAGTCACAGTGACTTGT...TAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATAGACAAGTCACTGTaGCTGAGGCTGCACACGGTG +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFIDKSL*LRLHTV
Trigger: CACCGTGTGCAGCCTCAGTCACAGTGACTTGTCTAT...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCAGGATGGTGAGGAGCTaGCCATTCTCCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLRMVRS*PFSRML
Trigger: CAGCATCCGGGAGAATGGGCAGCTCCTCACCATCCT...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTTATGCTGATGGTGGCTaGAGCCTTGGCAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPYADGG*SLGSTE
Trigger: TTCAGTACTGCCAAGGCTGCAGCCACCATCAGCATA...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTAGCATGCTGGGAAGCTTaGTGCATTCTGGCACGGACA +
Preference number: 4 (lower is better)
Translates to: GQSLGKFLHFCLGCLETLACWEA*CILART
Trigger: TGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGC...TAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACGTCCGCTTGCATATCTaGCGAGGCTTCTTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYVRLHI*RGFFFE
Trigger: CTCAAAGAAGAAGCCTCGGCAGATATGCAAGCGGAC...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCCCACCTGCCTGGCAATaGAAAGCTGCTCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLPPAWQ*KAAQHR
Trigger: CCTGTGCTGAGCAGCTTTGCATTGCCAGGCAGGTGG...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp ATGTCAAGCTGTTACATGAGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCCTACCACATGGGTTTTaGACTGTCTTTGCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: MSSCYMRQIWGFQAEFSSLPHGF*TVFALP
Trigger: AGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAG...GCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp ATGTCAAGCTGTTACATGAGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCGCATCCTCTGGTACATaGGGTTGGGATGAAGTCTAT +
Preference number: 4 (lower is better)
Translates to: MSSCYMRQIWGFQAEFSSASSGT*GWDEVY
Trigger: ATAGACTTCATCCCAACCCCATGTACCAGAGGATGC...GCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp GGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTAAGCTGGCCGGCAGACTaGGCTCACTACTTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: GQSLGKFLHFCLGCLETLSWPAD*AHYFQF
Trigger: GAACTGAAAGTAGTGAGCCCAGTCTGCCGGCCAGCT...TAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACCTATGTGGGTCTTGTTaGGCCTCTGGTGTAGGATTC +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYLCGSC*ASGVGF
Trigger: GAATCCTACACCAGAGGCCCAACAAGACCCACATAG...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATCACTGGCTTTCAATaGGTCCGTCTACCACATGGG +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPITGFQ*VRLPHG
Trigger: CCCATGTGGTAGACGGACCCATTGAAAGCCAGTGAT...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTTTGGATACTCCAGGCTaGGCAATTTGGGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPLDTPG*AIWGSE
Trigger: TTCTGAACCCCAAATTGCTCAGCCTGGAGTATCCAA...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTTGCGGAGGAACTCATTaGGGTCACCATAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCCGGTH*GHHRPC
Trigger: ACATGGCCTATGGTGACCTCAATGAGTTCCTCCGCA...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACAACAAACTTACGTTCTaGGAGGTAAGCCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYNKLTF*EVSHAS
Trigger: GCTGGCATGGCTTACCTCTCAGAACGTAAGTTTGTT...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTAACAAACTTACGTTCTaGGAGGTAAGCCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPNKLTF*EVSHAS
Trigger: GCTGGCATGGCTTACCTCTCAGAACGTAAGTTTGTT...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTCTCGCACGTAGTAAATaGCCTCCTCATGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLLARSK*PPHGPS
Trigger: GGATGGCCCATGAGGAGGTCATTTACTACGTGCGAG...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCGGGGTAGGATTCCACTaGACACATGAAAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFGVGFH*THESSH
Trigger: GTGGCTACTTTCATGTGTGCAGTGGAATCCTACCCC...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTTGGGGTCCCAATGCATaGTGGGAAGCTTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCWGPNA*WEACCI
Trigger: AATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCA...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTGAAACTGGGTCTGTCTaGAGGCAGCTTGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLETGSV*RQLAPT
Trigger: TGTTGGAGCAAGCTGCCTGCAGACAGACCCAGTTTC...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTACTCACAGTTCCCTCTaGCCTCTCACACATGCGTTC +
Preference number: 4 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCTHSSL*PLTHAF
Trigger: GAACGCATGTGTGAGAGGGCAGAGGGAACTGTGAGT...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAGCTTTAGACACACGCTaGAACTTTATTCTTTATTCA +
Preference number: 4 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEAALDTR*NFILYS
Trigger: TGAATAAAGAATAAAGTTGCAGCGTGTGTCTAAAGC...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGAAAGTGTTCTTTTTCTaGTCTACCACGATAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TAGALLISVLALGNSDTVKVFFF*STTIAE
Trigger: CTCTGCTATCGTGGTAGAGCAGAAAAAGAACACTTT...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCCAGCTTCACCACTTTaGAATATGCTGTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLPASPL*NMLSRG
Trigger: GCCTCGGGACAGCATATTCCAAAGTGGTGAAGCTGG...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTAAGCTTGCTGCATTCTaGCACGGACAGCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPKLAAF*HGQQMH
Trigger: ATGCATTTGCTGTCCGTGCCAGAATGCAGCAAGCTT...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTGGAGGAAGGCAGATTTaGAATGTCCACACTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPGGRQI*NVHTWL
Trigger: AAGCCAAGTGTGGACATTCCAAATCTGCCTTCCTCC...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCGGTGTAGGATTCCCCTaGCTCACAGAGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLGVGFP*LTESER
Trigger: CCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACC...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTGTCTTGTTGGGCCTCTaGTGTAGGATTCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLVLLGL*CRIPLA
Trigger: AGCCAGGGGAATCCTACACCAGAGGCCCAACAAGAC...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCACTATGAATAAGAAATaGCAGGTTTCCCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSTMNKK*QVSHQR
Trigger: TCTTTGGTGGGAAACCTGCCATTTCTTATTCATAGT...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTCGTTTTCAATCCAGGTaGTGGTGGGGACAGGAATGC +
Preference number: 4 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLRFQSR*WWGQEC
Trigger: GCATTCCTGTCCCCACCATCACCTGGATTGAAAACG...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCCGTTTTCAATCCAGGTaGTGGTGGGGACAGGAATGC +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLRFQSR*WWGQEC
Trigger: GCATTCCTGTCCCCACCATCACCTGGATTGAAAACG...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACAAACAGCTGCAGTCTTaGGTCAATCACTCGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYKQLQS*VNHSVF
Trigger: AAAGACCGAGTGATTGACTCAAGACTGCAGCTGTTT...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTATAGACAAGTCACTGTaGCTGAGGCTGCACACGGTG +
Preference number: 4 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLIDKSL*LRLHTV
Trigger: CACCGTGTGCAGCCTCAGTCACAGTGACTTGTCTAT...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACGTGGCTAAATCTCGGTaGACAAACTTACGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYVAKSR*TNLRSE
Trigger: CTCAGAACGTAAGTTTGTTCACCGAGATTTAGCCAC...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTTTCGGTGAATACTGGTaGAACTGGGTCTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLFGEYW*NWVCLQ
Trigger: CTGCAGACAGACCCAGTTTCACCAGTATTCACCGAA...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTCCGCATAGGAGGTGTTaGGAAAAACAAGAGCATCTT +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPPHRRC*EKQEHL
Trigger: AAGATGCTCTTGTTTTTCTCAACACCTCCTATGCGG...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCTGGCTCACAGAGTCTaGGAGGAAACTGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLLAHRV*EETAAF
Trigger: AAATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAG...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp ATGTCAAGCTGTTACATGAGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCCTTCCACAGAGTTACTaGGGTTCAGTTATTGCTTCT +
Preference number: 4 (lower is better)
Translates to: MSSCYMRQIWGFQAEFSSLPQSY*GSVIAS
Trigger: AGAAGCAATAACTGAACCTCAGTAACTCTGTGGAAG...GCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp GGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTAGGGGTAGGATTCCACTaGACACATGAAAGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: GQSLGKFLHFCLGCLETLGVGFH*THESSH
Trigger: GTGGCTACTTTCATGTGTGCAGTGGAATCCTACCCC...TAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCCCGTGCAGCAGTAAATaGCATCATCACTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFPCSSK*HHHCLP
Trigger: TGGAAGACAGTGATGATGGCATTTACTGCTGCACGG...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGAAGAAGCACAAATATTaGAAAGCTGGACATGATGGA +
Preference number: 4 (lower is better)
Translates to: TAGALLISVLALGNSDTVKKHKY*KAGHDG
Trigger: TCCATCATGTCCAGCTTTGCAATATTTGTGCTTCTT...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTGCACTACTCCAGGACTaGACTCCTGGAAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLALLQD*TPGRCG
Trigger: ACCACATCTTCCAGGAGTGCAGTCCTGGAGTAGTGC...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCAAAAGTAGGCTCTGTTaGTGTGTGCACTCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLKSRLC*CVHSGQ
Trigger: CTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTT...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGATCACTAAAAATGACTaGTGGTGCCTTACTGATATC +
Preference number: 4 (lower is better)
Translates to: TAGALLISVLALGNSDTVITKND*WCLTDI
Trigger: GATATCAGTAAGGCACCAGCAGTCATTTTTAGTGAT...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACGATGACAGGAGCTTTTaGAAGTTTCTCAGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYDDRSF*KFLSSA
Trigger: AGCGGAACTGAGAAACTTCCAAAAGCTCCTGTCATC...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTAAAGAGCAGGCACATTaGCTTCCCGACAGCACACAC +
Preference number: 4 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLKEQAH*LPDSTH
Trigger: GTGTGTGCTGTCGGGAAGCCAATGTGCCTGCTCTTT...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCGGACGAAGTTCCTTCTaGACAACGCAAGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFGRSSF*TTQGKW
Trigger: CCATTTTCCTTGCGTTGTCCAGAAGGAACTTCGTCC...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTCTATGTGGGTCTTGTTaGGCCTCTGGTGTAGGATTC +
Preference number: 4 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCLCGSC*ASGVGF
Trigger: GAATCCTACACCAGAGGCCCAACAAGACCCACATAG...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp ATGTCAAGCTGTTACATGAGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCGAATTCGGCCTCTTTTaGTCAAAAAGTAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: MSSCYMRQIWGFQAEFSSEFGLF*SKSRLC
Trigger: ACAGAGCCTACTTTTTGACCAAAAGAGGCCGAATTC...GCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp AGAAAGCCCGAAGCTGTCTTTGAATTTTGCAGAGCATACATGAACCATCTAAAACAAAGGAGCCAAAGGTaGCATTGTGGGATTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RKPEAVFEFCRAYMNHLKQRSQR*HCGIQE
Trigger: CTCCTGAATCCCACAATGTCACCTTTGGCTCCTTTG...TTTTAGATGGTTCATGTATGCTCTGCAAAATTCAAAGACAGCTTCGGGCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCATGCGGAGGAACTCATTaGGGTCACCATAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSACGGTH*GHHRPC
Trigger: ACATGGCCTATGGTGACCTCAATGAGTTCCTCCGCA...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCGTGGCTAAATCTCGGTaGACAAACTTACGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFVAKSR*TNLRSE
Trigger: CTCAGAACGTAAGTTTGTTCACCGAGATTTAGCCAC...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp ATGTCAAGCTGTTACATGAGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCAAAAGAAAGGGAGTTTaGGTCAGAGTGCTGCATATT +
Preference number: 4 (lower is better)
Translates to: MSSCYMRQIWGFQAEFSSKRKGV*VRVLHI
Trigger: AATATGCAGCACTCTGACTCAAACTCCCTTTCTTTT...GCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTTATGCTGATGGTGGCTaGAGCCTTGGCAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLYADGG*SLGSTE
Trigger: TTCAGTACTGCCAAGGCTGCAGCCACCATCAGCATA...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTTGGTTTACTCCATTCTaGTATGCTGATGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLWFTPF*YADGGC
Trigger: GCAGCCACCATCAGCATAGCAGAATGGAGTAAACCA...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCACTCCCACACCATTGTTaGCCGTGCAGCAGTAAATGC +
Preference number: 4 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSALPHHC*PCSSKC
Trigger: GCATTTACTGCTGCACGGCCAACAATGGTGTGGGAG...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGCATCCTCTGGTACATaGGGTTGGGATGAAGTCTAT +
Preference number: 4 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCASSGT*GWDEVY
Trigger: ATAGACTTCATCCCAACCCCATGTACCAGAGGATGC...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCGGTCCGTCTACCACATaGGTTTTGCACTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLGPSTT*VLHCLC
Trigger: GCAAAGACAGTGCAAAACCCATGTGGTAGACGGACC...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTTGTGACCAGCTACTTTaGAAACTGAACAGGATGACA +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPCDQLL*KLNRMT
Trigger: TGTCATCCTGTTCAGTTTCCAAAGTAGCTGGTCACA...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCCTTTATCCAAGACACTaGTGGTTTGGGATTACCCAT +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFLYPRH*WFGITH
Trigger: ATGGGTAATCCCAAACCATCAGTGTCTTGGATAAAG...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTTTGCAAAGCTGGACATaGTGGAGATTATTACAGTCA +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPLQSWT*WRLLQS
Trigger: TGACTGTAATAATCTCCATCATGTCCAGCTTTGCAA...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCTTGGATACTCCAGGCTaGGCAATTTGGGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLLDTPG*AIWGSE
Trigger: TTCTGAACCCCAAATTGCTCAGCCTGGAGTATCCAA...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTCGTTCCAGAATTCGGTaGATACTGGTGAAACTGGGT +
Preference number: 4 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLRSRIR*ILVKLG
Trigger: ACCCAGTTTCACCAGTATTCACCGAATTCTGGAACG...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTAGCCCGAAGCTGTCTTTaGATTTTGCAGAGCATACAT +
Preference number: 4 (lower is better)
Translates to: GQSLGKFLHFCLGCLETLARSCL*ILQSIH
Trigger: ATGTATGCTCTGCAAAATTCAAAGACAGCTTCGGGC...TAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCGTAACAGTGACACTGTaGGTGTCTCTCTTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFVTVTL*VSLFCL
Trigger: TAGACAAAAGAGAGACACTCACAGTGTCACTGTTAC...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCCCGTGCAGCAGTAAATaGCATCATCACTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLPCSSK*HHHCLP
Trigger: TGGAAGACAGTGATGATGGCATTTACTGCTGCACGG...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCCCCAGATTCAAGAACTaGAATTCGGGAATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFPRFKN*NSGIFP
Trigger: AGGGAAAATTCCCGAATTGCAGTTCTTGAATCTGGG...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCAGTCCGCTTGCATATCTaGCGAGGCTTCTTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSAVRLHI*RGFFFE
Trigger: CTCAAAGAAGAAGCCTCGGCAGATATGCAAGCGGAC...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCACTGCCCTCTCACACATaGGTTCCAGAATTCGGTGAA +
Preference number: 4 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSALPSHT*VPEFGE
Trigger: TTCACCGAATTCTGGAACGCATGTGTGAGAGGGCAG...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTGCATGTGTAGAGTCCTaGCTTGGTGATAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLACVES*LGDKQL
Trigger: CAGCTGTTTATCACCAAGCCAGGACTCTACACATGC...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCAAGCTTGCTGCATTCTaGCACGGACAGCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLKLAAF*HGQQMH
Trigger: ATGCATTTGCTGTCCGTGCCAGAATGCAGCAAGCTT...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTTTCAATGTTATTCCTTaGATACTCCAGGCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPFNVIP*ILQAEQ
Trigger: TTGCTCAGCCTGGAGTATCCAAGGAATAACATTGAA...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCACCAGGACTGCACTCCTaGAAGATGTGGTTACACAAC +
Preference number: 4 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSAPGLHS*KMWLHN
Trigger: GTTGTGTAACCACATCTTCCAGGAGTGCAGTCCTGG...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCTTTATCCAAGACACTaGTGGTTTGGGATTACCCAT +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLLYPRH*WFGITH
Trigger: ATGGGTAATCCCAAACCATCAGTGTCTTGGATAAAG...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTTCCTTTTGTACGTTATaGATCCTCAAGCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCSFCTL*ILKLPD
Trigger: ATCTGGGAGCTTGAGGATTCATAACGTACAAAAGGA...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTTTTGTAGTAGTCTGCTaGGTAGATGTTCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLFVVVC*VDVPGE
Trigger: CTCTCCAGGAACATCTACTCAGCAGACTACTACAAA...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTGAGTTACAGGCTTGCTaGTTTGCTGTTTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLELQAC*FAVSFL
Trigger: AAGGAATGAAACAGCAAATCAGCAAGCCTGTAACTC...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTCCCAGATTCAAGAACTaGAATTCGGGAATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCPRFKN*NSGIFP
Trigger: AGGGAAAATTCCCGAATTGCAGTTCTTGAATCTGGG...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp AGAAAGCCCGAAGCTGTCTTTGAATTTTGCAGAGCATACATGAACCATCTAAAACACCACTTTGGAATATaGTGTCCCGAGGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RKPEAVFEFCRAYMNHLKHHFGI*CPEAVF
Trigger: AAAAACAGCCTCGGGACAGCATATTCCAAAGTGGTG...TTTTAGATGGTTCATGTATGCTCTGCAAAATTCAAAGACAGCTTCGGGCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCTTGGTGATAAACAGCTaGAGTCTTGAGTCAATCACT +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFLVINS*SLESIT
Trigger: AGTGATTGACTCAAGACTGCAGCTGTTTATCACCAA...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCTGAACTTCTCCCCATaGTTATTGGTAGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLLNFSP*LLVAMH
Trigger: ATGCATAGCTACCAATAAGCATGGGGAGAAGTTCAG...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCAATCTTTTGCCAGGACTaGATTACACACCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSAIFCQD*ITHLPS
Trigger: AGAGGGGAGGTGTGTAATGCAGTCCTGGCAAAAGAT...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCAGAAGAGCTCCTTTACTaGCAAGCAGTACTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSAEELLY*QAVLSA
Trigger: TGCAGAGAGTACTGCTTGGCAGTAAAGGAGCTCTTC...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp GGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTACCTCTCCAACTTTTCTaGTTTGTTGGCATCTTGACT +
Preference number: 4 (lower is better)
Translates to: GQSLGKFLHFCLGCLETLPLQLF*FVGILT
Trigger: AGTCAAGATGCCAACAAAGCAGAAAAGTTGGAGAGG...TAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCAGCCATGGATATCTATaGTCAAGTTCTAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFSHGYL*SSSRLA
Trigger: AGCAAGTCTAGAACTTGAGCATAGATATCCATGGCT...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCCACTCCTGGAAGATGTaGTTACACAACAAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLHSWKM*LHNKAS
Trigger: TGAGGCTTTGTTGTGTAACCACATCTTCCAGGAGTG...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTTGTGACCAGCTACTTTaGAAACTGAACAGGATGACA +
Preference number: 4 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCCDQLL*KLNRMT
Trigger: TGTCATCCTGTTCAGTTTCCAAAGTAGCTGGTCACA...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CCA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCTCTACATTTTTGTCTTaGTTGCCTGGAGACACTATG +
Preference number: 4 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFSTFLS*LPGDTM
Trigger: CATAGTGTCTCCAGGCAACCAAGACAAAAATGTAGA...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp AGAAAGCCCGAAGCTGTCTTTGAATTTTGCAGAGCATACATGAACCATCTAAAATCCTTTTGTACGTTATaGATCCTCAAGCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: RKPEAVFEFCRAYMNHLKSFCTL*ILKLPD
Trigger: ATCTGGGAGCTTGAGGATTCATAACGTACAAAAGGA...TTTTAGATGGTTCATGTATGCTCTGCAAAATTCAAAGACAGCTTCGGGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp AGAAAGCCCGAAGCTGTCTTTGAATTTTGCAGAGCATACATGAACCATCTAAAATCTTTCACACTCTCTTaGATGGACCCAGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: RKPEAVFEFCRAYMNHLKSFTLS*MDPEET
Trigger: TGTTTCTTCTGGGTCCATTCAAGAGAGTGTGAAAGA...TTTTAGATGGTTCATGTATGCTCTGCAAAATTCAAAGACAGCTTCGGGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTTCTTTCACACTCTCTTaGATGGACCCAGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLSFTLS*MDPEET
Trigger: TGTTTCTTCTGGGTCCATTCAAGAGAGTGTGAAAGA...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCATTTGTAGTAGTCTGCTaGGTAGATGTTCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSAFVVVC*VDVPGE
Trigger: CTCTCCAGGAACATCTACTCAGCAGACTACTACAAA...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp AGAAAGCCCGAAGCTGTCTTTGAATTTTGCAGAGCATACATGAACCATCTAAAATGCCTGGAGACACTATaGATAAGAAATGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RKPEAVFEFCRAYMNHLKCLETL*IRNGRF
Trigger: AAACCTGCCATTTCTTATTCATAGTGTCTCCAGGCA...TTTTAGATGGTTCATGTATGCTCTGCAAAATTCAAAGACAGCTTCGGGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCCTGAACTTCTCCCCATaGTTATTGGTAGCTATGCAT +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLLNFSP*LLVAMH
Trigger: ATGCATAGCTACCAATAAGCATGGGGAGAAGTTCAG...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCTGAGGTTCAGTTATTaGTTCTATCATGTACAGAGG +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLLRFSY*FYHVQR
Trigger: CCTCTGTACATGATAGAAGCAATAACTGAACCTCAG...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp GGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTAAACACAGCAGAAAAATaGGCTGTAGACAATTGCCAA +
Preference number: 4 (lower is better)
Translates to: GQSLGKFLHFCLGCLETLNTAEK*AVDNCQ
Trigger: TTGGCAATTGTCTACAGCCCATTTTTCTGCTGTGTT...TAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR TCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCTTGCAAAGCTGGACATaGTGGAGATTATTACAGTCA +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLLQSWT*WRLLQS
Trigger: TGACTGTAATAATCTCCATCATGTCCAGCTTTGCAA...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCCCTAAGTGTCTTACATaGCGATTAAGCTACTTTCAC +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLPKCLT*RLSYFH
Trigger: GTGAAAGTAGCTTAATCGTCATGTAAGACACTTAGG...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR TCA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTGATATAGAGTGTGCTTaGAACGACATGCAAATTACA +
Preference number: 4 (lower is better)
Translates to: LETEQDDILPCAVCITNLDIECA*NDMQIT
Trigger: TGTAATTTGCATGTCGTTTCAAGCACACTCTATATC...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTAGTCTGAGAGGAAACTaGAGCATTTTATTTGAACGT +
Preference number: 4 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCSLRGN*SILFER
Trigger: ACGTTCAAATAAAATGCTGCAGTTTCCTCTCAGACT...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR GCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCAAAAATGACTGCTGGTaGCTTACTGATATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLKNDCW*LTDICP
Trigger: AGGACAGATATCAGTAAGGCACCAGCAGTCATTTTT...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCATATAAATGGGTGAAGTaGTTAGCACTTAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSAYKWVK*LALRLG
Trigger: TCCCAGCCTAAGTGCTAACCACTTCACCCATTTATA...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CAA 72 bp ACAAATCACTTCCACAGAGTTACTGAGGTTCAGTTATaGCTTCTATCATGTACAGAGGCTCTACAGTATAGT +
Preference number: 4 (lower is better)
Translates to: TNHFHRVTEVQL*LLSCTEALQYS
Trigger: ACTATACTGTAGAGCCTCTGTACATGATAGAAGCAATAACTGAACCTCAGTAACTCTGTGGAAGTGATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR GCA 90 bp AGAAAGCCCGAAGCTGTCTTTGAATTTTGCAGAGCATACATGAACCATCTAAAAGTGCTTGAAACGACATaGAAATTACAAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: RKPEAVFEFCRAYMNHLKVLETT*KLQITS
Trigger: GGAAGTGATTTGTAATTTGCATGTCGTTTCAAGCAC...TTTTAGATGGTTCATGTATGCTCTGCAAAATTCAAAGACAGCTTCGGGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCACAACGCAAGGAAAATaGCTCCACAGTTTACATTTT +
Preference number: 4 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLTTQGK*LHSLHF
Trigger: AAAATGTAAACTGTGGAGCCATTTTCCTTGCGTTGT...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR CAA 72 bp GCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTaGCCTGGAGACACTATGAATAAGAAATGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: AKSRKISTFLSW*PGDTMNKKWQV
Trigger: AACCTGCCATTTCTTATTCATAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CCA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCAACAACGCAAGGAAAATaGCTCCACAGTTTACATTTT +
Preference number: 4 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSATTQGK*LHSLHF
Trigger: AAAATGTAAACTGTGGAGCCATTTTCCTTGCGTTGT...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
3UTR CAA 72 bp TGTTATTTTCTCTTCCCTGTTCGTTTTCAGGAGAATTaGGGTTCCTGCTATATCAGAAATAAACTCAGATCA +
Preference number: 4 (lower is better)
Translates to: CYFLFPVRFQEN*GSCYIRNKLRS
Trigger: TGATCTGAGTTTATTTCTGATATAGCAGGAACCCAAATTCTCCTGAAAACGAACAGGGAAGAGAAAATAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
3UTR CAA 72 bp GTGAAAAATACTCTGGTATCTTACCATGTTTGGTATTaGATCACTAAAAATGACTGCTGGTGCCTTACTGAT +
Preference number: 4 (lower is better)
Translates to: VKNTLVSYHVWY*ITKNDCWCLTD
Trigger: ATCAGTAAGGCACCAGCAGTCATTTTTAGTGATCAAATACCAAACATGGTAAGATACCAGAGTATTTTTCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS CCA 90 bp CTAGATGTGGCAGTCTGGCACAGGCCGTGGGGTCCCAATGCATGCTaGGAAGCTTGCTGCATTCTGGCACGGACAGCAAATGCATCTCGG +
Preference number: 5 (lower is better)
Translates to: LDVAVWHRPWGPNAC*EACCILARTANASR
Trigger: CCGAGATGCATTTGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCACATCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 90 bp GTCTGGCACAGGCCGTGGGGTCCCAATGCATGCTGGGAAGCTTGCTaGATTCTGGCACGGACAGCAAATGCATCTCGGATCTGTAGAGTC +
Preference number: 5 (lower is better)
Translates to: VWHRPWGPNACWEAC*ILARTANASRICRV
Trigger: GACTCTACAGATCCGAGATGCATTTGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 90 bp GCAGTCTGGCACAGGCCGTGGGGTCCCAATGCATGCTGGGAAGCTTaGTGCATTCTGGCACGGACAGCAAATGCATCTCGGATCTGTAGA +
Preference number: 5 (lower is better)
Translates to: AVWHRPWGPNACWEA*CILARTANASRICR
Trigger: TCTACAGATCCGAGATGCATTTGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CCA 90 bp GTTACTGCTGCTGATTCTCTAGATGTGGCAGTCTGGCACAGGCCGTaGGGTCCCAATGCATGCTGGGAAGCTTGCTGCATTCTGGCACGG +
Preference number: 5 (lower is better)
Translates to: VTAADSLDVAVWHRP*GPNACWEACCILAR
Trigger: CCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCACATCTAGAGAATCAGCAGCAGTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374438.1
CDS GCA 90 bp TCTCTAGATGTGGCAGTCTGGCACAGGCCGTGGGGTCCCAATGCATaGTGGGAAGCTTGCTGCATTCTGGCACGGACAGCAAATGCATCT +
Preference number: 5 (lower is better)
Translates to: SLDVAVWHRPWGPNA*WEACCILARTANAS
Trigger: AGATGCATTTGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCACATCTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374438.1
CDS CCA 90 bp ACAGGCCGTGGGGTCCCAATGCATGCTGGGAAGCTTGCTGCATTCTaGCACGGACAGCAAATGCATCTCGGATCTGTAGAGTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: TGRGVPMHAGKLAAF*HGQQMHLGSVESSV
Trigger: CACAGAGGACTCTACAGATCCGAGATGCATTTGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 90 bp AGTTCTCAGGGCAGGAGAGGATGTTGCCATCTCGCACGTAGTAAATaGCCTCCTCATGGGCCATCCCATAGTAGGGCTGCAGGCCATAGG +
Preference number: 5 (lower is better)
Translates to: SSQGRRGCCHLARSK*PPHGPSHSRAAGHR
Trigger: CCTATGGCCTGCAGCCCTACTATGGGATGGCCCATGAGGAGGTCATTTACTACGTGCGAGATGGCAACATCCTCTCCTGCCCTGAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 90 bp GGGCTCCACAACTCTCCACAGCTCCTCCCACACCATTGTTGGCCGTaGAGCAGTAAATGCCATCATCACTGTCTTCCACACTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: GLHNSPQLLPHHCWP*SSKCHHHCLPHSGW
Trigger: CCATCCTGAGTGTGGAAGACAGTGATGATGGCATTTACTGCTGCACGGCCAACAATGGTGTGGGAGGAGCTGTGGAGAGTTGTGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 90 bp AATCTAGATGTGGCAGTCTGGCACAGGCCGTGGGGTCCCAATGCATaGTGGGAAGCTTGCTGCATTCTGGCACGGACAGCAAATGCATCT +
Preference number: 5 (lower is better)
Translates to: NLDVAVWHRPWGPNA*WEACCILARTANAS
Trigger: AGATGCATTTGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCACATCTAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCATCCAGGCTGAGCAATTaGGGGTTCAGAAGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEASRLSN*GFRRSG
Trigger: GCCGCTCCTTCTGAACCCCAAATTGCTCAGCCTGGA...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCGTAAGCCTGGTGCCCTaGCTTGAAACACCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVVSLVP*LETPFQ
Trigger: TTGGAAGGGTGTTTCAAGCAAGGGCACCAGGCTTAC...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATCTGTCTGCAGGCAGCTaGCTCCAACATAGACGCATG +
Preference number: 5 (lower is better)
Translates to: ASGVGFPWLTESERKLQHLSAGS*LQHRRM
Trigger: CATGCGTCTATGTTGGAGCAAGCTGCCTGCAGACAG...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS CCA 90 bp CTTGCAGGGCTCCACAACTCTCCACAGCTCCTCCCACACCATTGTTaGCCGTGCAGCAGTAAATGCCATCATCACTGTCTTCCACACTCA +
Preference number: 5 (lower is better)
Translates to: LAGLHNSPQLLPHHC*PCSSKCHHHCLPHS
Trigger: TGAGTGTGGAAGACAGTGATGATGGCATTTACTGCTGCACGGCCAACAATGGTGTGGGAGGAGCTGTGGAGAGTTGTGGAGCCCTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTTGATGGTGGCTGCAGCCTaGGCAGTACTGAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: GLFWSKSRLCCCVHSGQLMVAAA*AVLNFS
Trigger: GGAGAAGTTCAGTACTGCCAAGGCTGCAGCCACCAT...CAACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp TCGGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTCATAGACGCATGAGATaGTACAGCTCCACGGGGCAG +
Preference number: 5 (lower is better)
Translates to: SASFGQKVGSVAVCTRASHRRMR*YSSTGQ
Trigger: CTGCCCCGTGGAGCTGTACAATCTCATGCGTCTATG...ACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATCCTATGTGGGTCTTGTaGGGCCTCTGGTGTAGGATT +
Preference number: 5 (lower is better)
Translates to: ASGVGFPWLTESERKLQHPMWVL*GLWCRI
Trigger: AATCCTACACCAGAGGCCCAACAAGACCCACATAGG...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS TCA 90 bp TGCAGCAGTAAATGCCATCATCACTGTCTTCCACACTCAGGATGGTaGGGAGCTGCCCATTCTCCCGGATGCTGTACCGGGTGTCAAAGA +
Preference number: 5 (lower is better)
Translates to: CSSKCHHHCLPHSGW*GAAHSPGCCTGCQR
Trigger: TCTTTGACACCCGGTACAGCATCCGGGAGAATGGGCAGCTCCTCACCATCCTGAGTGTGGAAGACAGTGATGATGGCATTTACTGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 90 bp CCTCTGCCCTCTCACACATGCGTTCCAGAATTCGGTGAATACTGGTaGAACTGGGTCTGTCTGCAGGCAGCTTGCTCCAACATAGACGCA +
Preference number: 5 (lower is better)
Translates to: PLPSHTCVPEFGEYW*NWVCLQAACSNIDA
Trigger: TGCGTCTATGTTGGAGCAAGCTGCCTGCAGACAGACCCAGTTTCACCAGTATTCACCGAATTCTGGAACGCATGTGTGAGAGGGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 90 bp CTCACAGTTCCCTCTGCCCTCTCACACATGCGTTCCAGAATTCGGTaGATACTGGTGAAACTGGGTCTGTCTGCAGGCAGCTTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: LTVPSALSHMRSRIR*ILVKLGLSAGSLLQ
Trigger: TTGGAGCAAGCTGCCTGCAGACAGACCCAGTTTCACCAGTATTCACCGAATTCTGGAACGCATGTGTGAGAGGGCAGAGGGAACTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 90 bp GAATGCCTGTTGCTGTACAGTGCAGGGTCACAAAGGAGCCAAAGGTaGCATTGTGGGATTCAGGAGCCCGCAGGATCCTGGCAAAAACCT +
Preference number: 5 (lower is better)
Translates to: ECLLLYSAGSQRSQR*HCGIQEPAGSWQKP
Trigger: AGGTTTTTGCCAGGATCCTGCGGGCTCCTGAATCCCACAATGTCACCTTTGGCTCCTTTGTGACCCTGCACTGTACAGCAACAGGCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS CCA 90 bp GTTGCTGTACAGTGCAGGGTCACAAAGGAGCCAAAGGTGACATTGTaGGATTCAGGAGCCCGCAGGATCCTGGCAAAAACCTCAACTTCC +
Preference number: 5 (lower is better)
Translates to: VAVQCRVTKEPKVTL*DSGARRILAKTSTS
Trigger: GGAAGTTGAGGTTTTTGCCAGGATCCTGCGGGCTCCTGAATCCCACAATGTCACCTTTGGCTCCTTTGTGACCCTGCACTGTACAGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS CCA 90 bp GGTTTTCTTTGTTATAATCTAGATGTGGCAGTCTGGCACAGGCCGTaGGGTCCCAATGCATGCTGGGAAGCTTGCTGCATTCTGGCACGG +
Preference number: 5 (lower is better)
Translates to: GFLCYNLDVAVWHRP*GPNACWEACCILAR
Trigger: CCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCACATCTAGATTATAACAAAGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGTGTCCACACTTGGCTTaGAGGACGTCATTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKCPHLA*RTSLVG
Trigger: TCCCACCAATGACGTCCTCAAAGCCAAGTGTGGACA...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGGTAAGCCTGGTGCCCTaGCTTGAAACACCCTTCCAA +
Preference number: 5 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKVSLVP*LETPFQ
Trigger: TTGGAAGGGTGTTTCAAGCAAGGGCACCAGGCTTAC...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCATAGACGCATGAGATaGTACAGCTCCACGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSHRRMR*YSSTGQ
Trigger: CTGCCCCGTGGAGCTGTACAATCTCATGCGTCTATG...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTTGTTTCCTATGTGGGTCTaGTTGGGCCTCTGGTGTAGG +
Preference number: 5 (lower is better)
Translates to: GLFWSKSRLCCCVHSGQLFPMWV*LGLWCR
Trigger: CCTACACCAGAGGCCCAACAAGACCCACATAGGAAA...CAACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS TCA 90 bp GAATGCCTGTTGCTGTACAGTGCAGGGTCACAAAGGAGCCAAAGGTaGCATTGTGGGATTCAGGAGCCCGCAGGATCCTGGCAAAAACTT +
Preference number: 5 (lower is better)
Translates to: ECLLLYSAGSQRSQR*HCGIQEPAGSWQKL
Trigger: AAGTTTTTGCCAGGATCCTGCGGGCTCCTGAATCCCACAATGTCACCTTTGGCTCCTTTGTGACCCTGCACTGTACAGCAACAGGCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000634612.1
CDS TCA 90 bp TTGGGGTTCAGAAGGAGCGGCATCCTCTGGTACATGGGGTTGGGATaGAGTCTATCTAGTAAGAGCTCAGAAGGCAGTGTGGTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: LGFRRSGILWYMGLG*SLSSKSSEGSVVRV
Trigger: AACCCTCACCACACTGCCTTCTGAGCTCTTACTAGATAGACTTCATCCCAACCCCATGTACCAGAGGATGCCGCTCCTTCTGAACCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 90 bp GGACCAGTAGCTCTTGGGCCTCCTCAGGGTCCGCATAGGAGGTGTTaGGAAAAACAAGAGCATCTTTTGCCAGGACTGCATTACACACCT +
Preference number: 5 (lower is better)
Translates to: GPVALGPPQGPHRRC*EKQEHLLPGLHYTP
Trigger: AGGTGTGTAATGCAGTCCTGGCAAAAGATGCTCTTGTTTTTCTCAACACCTCCTATGCGGACCCTGAGGAGGCCCAAGAGCTACTGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS GCA 90 bp TCAATCCAGGTGATGGTGGGGACAGGAATGCCTGTTGCTGTACAGTaGAGGGTCACAAAGGAGCCAAAGGTGACATTGTGGGATTCAGGA +
Preference number: 5 (lower is better)
Translates to: SIQVMVGTGMPVAVQ*RVTKEPKVTLWDSG
Trigger: TCCTGAATCCCACAATGTCACCTTTGGCTCCTTTGTGACCCTGCACTGTACAGCAACAGGCATTCCTGTCCCCACCATCACCTGGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS-3UTR CAA 90 bp CCTATGTGGGTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGTACCAGTGGAATGTaGACGAGCTCTCTCATGATT +
Preference number: 5 (lower is better)
Translates to: PMWVLLGLWCRIPLAHRVCTSGM*TSSLMI
Trigger: AATCATGAGAGAGCTCGTCAACATTCCACTGGTACA...GACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGACCCACATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTTGAGGTTTCATCTTCACTaGCAGGGCTCCACAACTCTC +
Preference number: 5 (lower is better)
Translates to: GLFWSKSRLCCCVHSGQLRFHLH*QGSTTL
Trigger: GAGAGTTGTGGAGCCCTGCAAGTGAAGATGAAACCT...CAACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGGGACAGGAATGCCTGTaGCTGTACAGTGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: TAGALLISVLALGNSDTVGQECL*LYSAGS
Trigger: TGACCCTGCACTGTACAGCAACAGGCATTCCTGTCC...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAGCTTTGAGGACGTCATaGGTGGGAATGCTAGATGTG +
Preference number: 5 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEAALRTS*VGMLDV
Trigger: CACATCTAGCATTCCCACCAATGACGTCCTCAAAGC...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416899.7
CDS-3UTR CAA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCTGTCCACACTTGGCTTaGAGGACGTCATTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSCPHLA*RTSLVG
Trigger: TCCCACCAATGACGTCCTCAAAGCCAAGTGTGGACA...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp CAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGTCTACCACATGGGTTTaGCACTGTCTTTGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: QWVRLPHGFCTVFALPGKSTTWV*HCLCSP
Trigger: GGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGA...CTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS GCA 90 bp TACTGCCAAGCAGTACTCTCTCCATTCTGCTATGCTGATGGTGGCTaGAGCCTTGGCAGTACTGAACTTCTCCCCATGCTTATTGGTAGC +
Preference number: 5 (lower is better)
Translates to: YCQAVLSPFCYADGG*SLGSTELLPMLIGS
Trigger: GCTACCAATAAGCATGGGGAGAAGTTCAGTACTGCCAAGGCTGCAGCCACCATCAGCATAGCAGAATGGAGAGAGTACTGCTTGGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000189978.10
CDS-3UTR CAA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATTTACCAGCCATTCTTTaGCGCAGAAGAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: ASGVGFPWLTESERKLQHLPAIL*RRRAPL
Trigger: TAAAGGAGCTCTTCTGCGCAAAAGAATGGCTGGTAA...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS TCA 90 bp CTTGAATGGACCCAGAAGAAACAGCATTTCCGTTTTCAATCCAGGTaGTGGTGGGGACAGGAATGCCTGTTGCTGTACAGTGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: LEWTQKKQHFRFQSR*WWGQECLLLYSAGS
Trigger: TGACCCTGCACTGTACAGCAACAGGCATTCCTGTCCCCACCATCACCTGGATTGAAAACGGAAATGCTGTTTCTTCTGGGTCCATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS TCA 90 bp ACAATGTTAGGGTTGTCAAATTCTGCCATGAGGGCTGCCTCCCTCTaGAAGTCCGCTTGCATATCTGCCGAGGCTTCTTCTTTGAGCATC +
Preference number: 5 (lower is better)
Translates to: TMLGLSNSAMRAASL*KSACISAEASSLSI
Trigger: GATGCTCAAAGAAGAAGCCTCGGCAGATATGCAAGCGGACTTTCAGAGGGAGGCAGCCCTCATGGCAGAATTTGACAACCCTAACATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 90 bp CTCTTCCATTACCAGCCATTCTTTTGCGCAGAAGAGCTCCTTTACTaGCAAGCAGTACTCTCTCCATTCTGCTATGCTGATGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: LFHYQPFFCAEELLY*QAVLSPFCYADGGC
Trigger: GCAGCCACCATCAGCATAGCAGAATGGAGAGAGTACTGCTTGGCAGTAAAGGAGCTCTTCTGCGCAAAAGAATGGCTGGTAATGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000189978.10
CDS CCA 90 bp GTTGCTGTACAGTGCAGGGTCACAAAGGAGCCAAAGGTGACATTGTaGGATTCAGGAGCCCGCAGGATCCTGGCAAAAACTTTAGTATCT +
Preference number: 5 (lower is better)
Translates to: VAVQCRVTKEPKVTL*DSGARRILAKTLVS
Trigger: AGATACTAAAGTTTTTGCCAGGATCCTGCGGGCTCCTGAATCCCACAATGTCACCTTTGGCTCCTTTGTGACCCTGCACTGTACAGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000634612.1
CDS-3UTR CAA 90 bp CTGGCTTTCAATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCTTGGAATGTCCACACTaGGCTTTGAGGACGTCATTG +
Preference number: 5 (lower is better)
Translates to: LAFNGSVYHMGFALSLLSLECPH*ALRTSL
Trigger: CAATGACGTCCTCAAAGCCAAGTGTGGACATTCCAA...GGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCATTGAAAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCCAGGCTGAGCAATTaGGGGTTCAGAAGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYSRLSN*GFRRSG
Trigger: GCCGCTCCTTCTGAACCCCAAATTGCTCAGCCTGGA...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACGCCTGGTGCCCTTGCTaGAAACACCCTTCCAAACGC +
Preference number: 5 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYAWCPC*KHPSKR
Trigger: GCGTTTGGAAGGGTGTTTCAAGCAAGGGCACCAGGC...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAACCGCCTTACTGTCGTaGTATCCTACAGAATCTGTT +
Preference number: 5 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEATALLS*YPTESV
Trigger: AACAGATTCTGTAGGATACAACGACAGTAAGGCGGT...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS GCA 90 bp GTAGAGTCCTCTGTGGGTCTTCTCTTCCATTACCAGCCATTCTTTTaGGCAGAAGAGCTCCTTTACTGCCAAGCAGTACTCTCTCCATTC +
Preference number: 5 (lower is better)
Translates to: VESSVGLLFHYQPFF*AEELLYCQAVLSPF
Trigger: GAATGGAGAGAGTACTGCTTGGCAGTAAAGGAGCTCTTCTGCGCAAAAGAATGGCTGGTAATGGAAGAGAAGACCCACAGAGGACTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000189978.10
CDS-3UTR CAA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGGTGGCTGCAGCCTaGGCAGTACTGAACTTCTCC +
Preference number: 5 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPMVAAA*AVLNFS
Trigger: GGAGAAGTTCAGTACTGCCAAGGCTGCAGCCACCAT...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCGCCTGGTGCCCTTGCTaGAAACACCCTTCCAAACGC +
Preference number: 5 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFAWCPC*KHPSKR
Trigger: GCGTTTGGAAGGGTGTTTCAAGCAAGGGCACCAGGC...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACCCTCTGAAAGTCCGCTaGCATATCTGCCGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYPLKVR*HICRGF
Trigger: GAAGCCTCGGCAGATATGCAAGCGGACTTTCAGAGG...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTCAAAGAGCAGGCACATaGGCTTCCCGACAGCACACA +
Preference number: 5 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPQRAGT*ASRQHT
Trigger: TGTGTGCTGTCGGGAAGCCAATGTGCCTGCTCTTTG...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTGCTCAAGTTCTAGACTaGCTGGTGGCCCTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPAQVLD*LVALSN
Trigger: GTTGGAGAGGGCCACCAGCAAGTCTAGAACTTGAGC...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp GCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTGAGAGGAAACTGCAGCATAAAAAGAAAGGGAGTTaGAGTCAGAGTGCTGCATAT +
Preference number: 5 (lower is better)
Translates to: ASGVGFPWLTESERKLQHKKKGS*SQSAAY
Trigger: ATATGCAGCACTCTGACTCAAACTCCCTTTCTTTTT...ATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS TCA 90 bp GTCTTGTTGGGCCTCTGGTGTAGGATTCCCCTGGCTCACAGAGTCTaGGAGGAAACTGCAGCATTTTATTTGAACGTCTTCAACCTTAGA +
Preference number: 5 (lower is better)
Translates to: VLLGLWCRIPLAHRV*EETAAFYLNVFNLR
Trigger: TCTAAGGTTGAAGACGTTCAAATAAAATGCTGCAGTTTCCTCTCAGACTCTGTGAGCCAGGGGAATCCTACACCAGAGGCCCAACAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS GCA 90 bp CTCTTCCATTACCAGCCATTCTTTTGCGCAGAAGAGCTCCTTTACTaGCAAGCAGTACTCTCTAAAATCTGCTATGCTGATGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: LFHYQPFFCAEELLY*QAVLSKICYADGGC
Trigger: GCAGCCACCATCAGCATAGCAGATTTTAGAGAGTACTGCTTGGCAGTAAAGGAGCTCTTCTGCGCAAAAGAATGGCTGGTAATGGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374440.7
CDS GCA 90 bp GTTATCTTTCTGTGGTTTACTCCATTCTGCTATGCTGATGGTGGCTaGAGCCTTGGCAGTACTGAACTTCTCCCCATGCTTATTGGTAGC +
Preference number: 5 (lower is better)
Translates to: VIFLWFTPFCYADGG*SLGSTELLPMLIGS
Trigger: GCTACCAATAAGCATGGGGAGAAGTTCAGTACTGCCAAGGCTGCAGCCACCATCAGCATAGCAGAATGGAGTAAACCACAGAAAGATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS GCA 90 bp GTAGAGTCCTCTGTGGGTCTTCTCTTCCATTACCAGCCATTCTTTTaGGCAGAAGAGCTCCTTTACTGCCAAGCAGTACTCTCTGCAAAT +
Preference number: 5 (lower is better)
Translates to: VESSVGLLFHYQPFF*AEELLYCQAVLSAN
Trigger: ATTTGCAGAGAGTACTGCTTGGCAGTAAAGGAGCTCTTCTGCGCAAAAGAATGGCTGGTAATGGAAGAGAAGACCCACAGAGGACTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS CCA 90 bp AAACGCTCCCTCTCCGATGTCTCTCACATATTCAATGTTATTCCTTaGATACTCCAGGCTGAGCAATTTGGGGTTCAGAAGGAGCGGCAT +
Preference number: 5 (lower is better)
Translates to: KRSLSDVSHIFNVIP*ILQAEQFGVQKERH
Trigger: ATGCCGCTCCTTCTGAACCCCAAATTGCTCAGCCTGGAGTATCCAAGGAATAACATTGAATATGTGAGAGACATCGGAGAGGGAGCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GGCCTCTTTTGGTCAAAAAGTAGGCTCTGTTGCTGTGTGCACTCGGGCCAGTTGTTCTACATTTTTGTCTaGGTTGCCTGGAGACACTAT +
Preference number: 5 (lower is better)
Translates to: GLFWSKSRLCCCVHSGQLFYIFV*VAWRHY
Trigger: ATAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAA...CAACTGGCCCGAGTGCACACAGCAACAGAGCCTACTTTTTGACCAAAAGAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAACTGAGGTTCAGTTATaGCTTCTATCATGTACAGAG +
Preference number: 5 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEATEVQL*LLSCTE
Trigger: CTCTGTACATGATAGAAGCAATAACTGAACCTCAGT...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS TCA 90 bp TATGCATGTGTAGAGTCCTGGCTTGGTGATAAACAGCTGCAGTCTTaGGTCAATCACTCGGTCTTTCACACTCTCTTGAATGGACCCAGA +
Preference number: 5 (lower is better)
Translates to: YACVESWLGDKQLQS*VNHSVFHTLLNGPR
Trigger: TCTGGGTCCATTCAAGAGAGTGTGAAAGACCGAGTGATTGACTCAAGACTGCAGCTGTTTATCACCAAGCCAGGACTCTACACATGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS TCA 90 bp ACGGATAGGGATAGCGTCGTTTTCATTAGCTTTGTAGTAGTCTGCTaGGTAGATGTTCCTGGAGAGGCCAAAGTCGGCAATTTTCACCAC +
Preference number: 5 (lower is better)
Translates to: TDRDSVVFISFVVVC*VDVPGEAKVGNFHH
Trigger: GTGGTGAAAATTGCCGACTTTGGCCTCTCCAGGAACATCTACTCAGCAGACTACTACAAAGCTAATGAAAACGACGCTATCCCTATCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 90 bp GTAGAGTCCTCTGTGGGTCTTCTCTTCCATTACCAGCCATTCTTTTaGGCAGAAGAGCTCCTTTACTGCCAAGCAGTACTCTCTAAAATC +
Preference number: 5 (lower is better)
Translates to: VESSVGLLFHYQPFF*AEELLYCQAVLSKI
Trigger: GATTTTAGAGAGTACTGCTTGGCAGTAAAGGAGCTCTTCTGCGCAAAAGAATGGCTGGTAATGGAAGAGAAGACCCACAGAGGACTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374440.7
CDS-3UTR CAA 90 bp GGGCAAAGTCTAGGAAAATTTCTACATTTTTGTCTTGGTTGCCTGGAGACACTACCTCTGAAAGTCCGCTaGCATATCTGCCGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: GQSLGKFLHFCLGCLETLPLKVR*HICRGF
Trigger: GAAGCCTCGGCAGATATGCAAGCGGACTTTCAGAGG...TAGTGTCTCCAGGCAACCAAGACAAAAATGTAGAAATTTTCCTAGACTTTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTCTGTCTGCAGGCAGCTaGCTCCAACATAGACGCATG +
Preference number: 5 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCLSAGS*LQHRRM
Trigger: CATGCGTCTATGTTGGAGCAAGCTGCCTGCAGACAG...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp TGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCCCTATGTGGGTCTTGTaGGGCCTCTGGTGTAGGATT +
Preference number: 5 (lower is better)
Translates to: WKLNRMTFFPVQCVLQTFPMWVL*GLWCRI
Trigger: AATCCTACACCAGAGGCCCAACAAGACCCACATAGG...GAAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp ATGGGTCCGTCTACCACATGGGTTTTGCACTGTCTTTGCTCTCCCTGGGAAGCAAGATATAGAGTGTGCTaGAAACGACATGCAAATTAC +
Preference number: 5 (lower is better)
Translates to: MGPSTTWVLHCLCSPWEARYRVC*KRHANY
Trigger: GTAATTTGCATGTCGTTTCAAGCACACTCTATATCT...TGCTTCCCAGGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGACGGACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS GCA 90 bp GTAGAGTCCTCTGTGGGTCTTCTCTTCCATTACCAGCCATTCTTTTaGGCAGAAGAGCTCCTTTACTGCCAAGCAGTACTCTCTAAAATA +
Preference number: 5 (lower is better)
Translates to: VESSVGLLFHYQPFF*AEELLYCQAVLSKI
Trigger: TATTTTAGAGAGTACTGCTTGGCAGTAAAGGAGCTCTTCTGCGCAAAAGAATGGCTGGTAATGGAAGAGAAGACCCACAGAGGACTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374438.1
CDS-3UTR CAA 90 bp ACTGCTGGTGCCTTACTGATATCTGTCCTGGCACTTGGTAACAGTGACACTGTGTCCTGCATCTTCCTTTaGTACGTTATGAATCCTCAA +
Preference number: 5 (lower is better)
Translates to: TAGALLISVLALGNSDTVSCIFL*YVMNPQ
Trigger: TTGAGGATTCATAACGTACAAAAGGAAGATGCAGGA...CACAGTGTCACTGTTACCAAGTGCCAGGACAGATATCAGTAAGGCACCAGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp ATGTCAAGCTGTTACATGAGGCAGATTTGGGGATTTCAGGCAGAGTTTTCCAGCGTCTTTCACACTCTCTaGAATGGACCCAGAAGAAAC +
Preference number: 5 (lower is better)
Translates to: MSSCYMRQIWGFQAEFSSVFHTL*NGPRRN
Trigger: GTTTCTTCTGGGTCCATTCAAGAGAGTGTGAAAGAC...GCTGGAAAACTCTGCCTGAAATCCCCAAATCTGCCTCATGTAACAGCTTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTTTGGAATGTCCACACTaGGCTTTGAGGACGTCATTG +
Preference number: 5 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPLECPH*ALRTSL
Trigger: CAATGACGTCCTCAAAGCCAAGTGTGGACATTCCAA...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGCCGAGGCTTCTTCTTaGAGCATCTTTACTGCCACC +
Preference number: 5 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCAEASS*SIFTAT
Trigger: GGTGGCAGTAAAGATGCTCAAAGAAGAAGCCTCGGC...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTCAAAGAGCAGGCACATaGGCTTCCCGACAGCACACA +
Preference number: 5 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLQRAGT*ASRQHT
Trigger: TGTGTGCTGTCGGGAAGCCAATGTGCCTGCTCTTTG...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTAGGTTTCATCTTCACTaGCAGGGCTCCACAACTCTC +
Preference number: 5 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCRFHLH*QGSTTL
Trigger: GAGAGTTGTGGAGCCCTGCAAGTGAAGATGAAACCT...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTTCCCGAGGCTGTTTTTaGCCACACATCGATACTGTC +
Preference number: 5 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCSRGCF*PHIDTV
Trigger: GACAGTATCGATGTGTGGCAAAAAACAGCCTCGGGA...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCAGGACAGGAATGCCTGTaGCTGTACAGTGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSAGQECL*LYSAGS
Trigger: TGACCCTGCACTGTACAGCAACAGGCATTCCTGTCC...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACGTCTTTCACACTCTCTaGAATGGACCCAGAAGAAAC +
Preference number: 5 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYVFHTL*NGPRRN
Trigger: GTTTCTTCTGGGTCCATTCAAGAGAGTGTGAAAGAC...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTTTACCAGCCATTCTTTaGCGCAGAAGAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: ALPGKQTTHYSCLLLLFPLPAIL*RRRAPL
Trigger: TAAAGGAGCTCTTCTGCGCAAAAGAATGGCTGGTAA...AGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp AGAAAGCCCGAAGCTGTCTTTGAATTTTGCAGAGCATACATGAACCATCTAAAAGCCGAGGCTTCTTCTTaGAGCATCTTTACTGCCACC +
Preference number: 5 (lower is better)
Translates to: RKPEAVFEFCRAYMNHLKAEASS*SIFTAT
Trigger: GGTGGCAGTAAAGATGCTCAAAGAAGAAGCCTCGGC...TTTTAGATGGTTCATGTATGCTCTGCAAAATTCAAAGACAGCTTCGGGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTTCTACCACATGGGTTTaGCACTGTCTTTGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCSTTWV*HCLCSP
Trigger: GGGAGAGCAAAGACAGTGCAAAACCCATGTGGTAGA...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp TCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGTAGAGGTTGAGTCATaGGCTCTTGGGTTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: SLGSKQHTTHVYSYSFLCVEVES*ALGLKG
Trigger: TCCCTTCAACCCAAGAGCCAATGACTCAACCTCTAC...ACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTTCCCGAGGCTGTTTTTaGCCACACATCGATACTGTC +
Preference number: 5 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLSRGCF*PHIDTV
Trigger: GACAGTATCGATGTGTGGCAAAAAACAGCCTCGGGA...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACCGTTTTCAGGAGAATTaGGGTTCCTGCTATATCAGA +
Preference number: 5 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYRFQEN*GSCYIR
Trigger: TCTGATATAGCAGGAACCCAAATTCTCCTGAAAACG...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS TCA 90 bp TTTGCCACACATCGATACTGTCCTGCATCTTCCTTTTGTACGTTATaGATCCTCAAGCTCCCAGATTCAAGAACTGCAATTCGGGAATTT +
Preference number: 5 (lower is better)
Translates to: FATHRYCPASSFCTL*ILKLPDSRTAIREF
Trigger: AAATTCCCGAATTGCAGTTCTTGAATCTGGGAGCTTGAGGATTCATAACGTACAAAAGGAAGATGCAGGACAGTATCGATGTGTGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374439.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTCAAGACACTGATGGTTaGGGATTACCCATTGTAGTA +
Preference number: 5 (lower is better)
Translates to: LETEQDDILPCAVCITNLQDTDG*GLPIVV
Trigger: TACTACAATGGGTAATCCCAAACCATCAGTGTCTTG...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTAAACAAGAGCATCTTTaGCCAGGACTGCATTACACA +
Preference number: 5 (lower is better)
Translates to: LETEQDDILPCAVCITNLKQEHL*PGLHYT
Trigger: TGTGTAATGCAGTCCTGGCAAAAGATGCTCTTGTTT...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp CTGTCTTTGCTCTCCCTGGGAAGCAAACAACACACTACTCATGTTTACTCTTACTTAGATAAAGATGTATaGTGTGAGGATCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: LSLLSLGSKQHTTHVYSYLDKDV*CEDPLR
Trigger: TCTCAGTGGATCCTCACACAATACATCTTTATCTAA...GTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTCCCAGGGAGAGCAAAGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTAGCCCGAAGCTGTCTTaGAATTTTGCAGAGCATACA +
Preference number: 5 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLSPKLS*NFAEHT
Trigger: TGTATGCTCTGCAAAATTCAAAGACAGCTTCGGGCT...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCATGTACCAGTGGAATGTaGACGAGCTCTCTCATGATT +
Preference number: 5 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSACTSGM*TSSLMI
Trigger: AATCATGAGAGAGCTCGTCAACATTCCACTGGTACA...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp TTGGAAACTGAACAGGATGACATTCTTCCCTGTGCAGTGTGTATTACAAACCTTTCCTGCATCTTCCTTTaGTACGTTATGAATCCTCAA +
Preference number: 5 (lower is better)
Translates to: LETEQDDILPCAVCITNLSCIFL*YVMNPQ
Trigger: TTGAGGATTCATAACGTACAAAAGGAAGATGCAGGA...AAGGTTTGTAATACACACTGCACAGGGAAGAATGTCATCCTGTTCAGTTTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCAGCTTTGAGGACGTCATaGGTGGGAATGTTTTTAGGT +
Preference number: 5 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSAALRTS*VGMFLG
Trigger: ACCTAAAAACATTCCCACCAATGACGTCCTCAAAGC...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS GCA 90 bp TCTTCGGCAGCAATAGAGAGTAGTTATGGTAAGAAGCACAAATATTaGAAAGCTGGACATGATGGAGATTATTACAGTCATGGAGTATGT +
Preference number: 5 (lower is better)
Translates to: SSAAIESSYGKKHKY*KAGHDGDYYSHGVC
Trigger: ACATACTCCATGACTGTAATAATCTCCATCATGTCCAGCTTTGCAATATTTGTGCTTCTTACCATAACTACTCTCTATTGCTGCCGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS-3UTR CAA 90 bp GAAGCAAACAACACACTACTCATGTTTACTCTTACTCTTTCCTATGTGGGTCTTTTTGTTGCAAAAGGGTaGTCTGCTAATGACTGTTTG +
Preference number: 5 (lower is better)
Translates to: EANNTLLMFTLTLSYVGLFVAKG*SANDCL
Trigger: CAAACAGTCATTAGCAGACAACCCTTTTGCAACAAA...AAGACCCACATAGGAAAGAGTAAGAGTAAACATGAGTAGTGTGTTGTTTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416899.7
CDS-3UTR CAA 90 bp TTCTTCCCTGTGCAGTGTGTATTACAAACCTTCATGAAGAAGAATAGTTGTCTCGTGATGGAGGGAAATTaGGAAGCTCTAATTTTATGT +
Preference number: 5 (lower is better)
Translates to: FFPVQCVLQTFMKKNSCLVMEGN*EALILC
Trigger: ACATAAAATTAGAGCTTCCAAATTTCCCTCCATCAC...GAGACAACTATTCTTCTTCATGAAGGTTTGTAATACACACTGCACAGGGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS-3UTR CAA 90 bp GCTGTTTCATTCCTTAGAAACCCTCTATCAATAAAATGTAACCACAACTCTGCAGTGAGTGTCTCTCTTTaGTCTACCTTTTTGAATGTA +
Preference number: 5 (lower is better)
Translates to: AVSFLRNPLSIKCNHNSAVSVSL*STFLNV
Trigger: TACATTCAAAAAGGTAGACAAAAGAGAGACACTCAC...TGCAGAGTTGTGGTTACATTTTATTGATAGAGGGTTTCTAAGGAATGAAACAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS GCA 72 bp GTGGCAGTCTGGCACAGGCCGTGGGGTCCCAATGCATaGTGGGAAGCTTGCTGCATTCTGGCACGGACAGCA +
Preference number: 6 (lower is better)
Translates to: VAVWHRPWGPNA*WEACCILARTA
Trigger: TGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 72 bp AGATGTGGCAGTCTGGCACAGGCCGTGGGGTCCCAATaGATGCTGGGAAGCTTGCTGCATTCTGGCACGGAC +
Preference number: 6 (lower is better)
Translates to: RCGSLAQAVGSQ*MLGSLLHSGTD
Trigger: GTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 72 bp CACAGGCCGTGGGGTCCCAATGCATGCTGGGAAGCTTaGTGCATTCTGGCACGGACAGCAAATGCATCTCGG +
Preference number: 6 (lower is better)
Translates to: HRPWGPNACWEA*CILARTANASR
Trigger: CCGAGATGCATTTGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CCA 72 bp GCAGTCTGGCACAGGCCGTGGGGTCCCAATGCATGCTaGGAAGCTTGCTGCATTCTGGCACGGACAGCAAAT +
Preference number: 6 (lower is better)
Translates to: AVWHRPWGPNAC*EACCILARTAN
Trigger: ATTTGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 72 bp AGGCCGTGGGGTCCCAATGCATGCTGGGAAGCTTGCTaGATTCTGGCACGGACAGCAAATGCATCTCGGATC +
Preference number: 6 (lower is better)
Translates to: RPWGPNACWEAC*ILARTANASRI
Trigger: GATCCGAGATGCATTTGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CCA 72 bp AGGACGTCATTGGTGGGAATGCTAGATGTGGCAGTCTaGCACAGGCCGTGGGGTCCCAATGCATGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: RTSLVGMLDVAV*HRPWGPNACWE
Trigger: TTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCACATCTAGCATTCCCACCAATGACGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000416899.7
CDS CCA 72 bp ACTGGGCTCACTACTTTCAGTTCATTCCAGGCCGTGTaGACCAGTAGCTCTTGGGCCTCCTCAGGGTCCGCA +
Preference number: 6 (lower is better)
Translates to: TGLTTFSSFQAV*TSSSWASSGSA
Trigger: TGCGGACCCTGAGGAGGCCCAAGAGCTACTGGTCCACACGGCCTGGAATGAACTGAAAGTAGTGAGCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS CCA 72 bp GCTGATTCTCTAGATGTGGCAGTCTGGCACAGGCCGTaGGGTCCCAATGCATGCTGGGAAGCTTGCTGCATT +
Preference number: 6 (lower is better)
Translates to: ADSLDVAVWHRP*GPNACWEACCI
Trigger: AATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCACATCTAGAGAATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374438.1
CDS CCA 72 bp AGGGTTACTGCTGCTGATTCTCTAGATGTGGCAGTCTaGCACAGGCCGTGGGGTCCCAATGCATGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: RVTAADSLDVAV*HRPWGPNACWE
Trigger: TTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCACATCTAGAGAATCAGCAGCAGTAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374438.1
CDS TCA 72 bp AAATGCCATCATCACTGTCTTCCACACTCAGGATGGTaGGGAGCTGCCCATTCTCCCGGATGCTGTACCGGG +
Preference number: 6 (lower is better)
Translates to: KCHHHCLPHSGW*GAAHSPGCCTG
Trigger: CCCGGTACAGCATCCGGGAGAATGGGCAGCTCCTCACCATCCTGAGTGTGGAAGACAGTGATGATGGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 72 bp TTGCTGTACAGTGCAGGGTCACAAAGGAGCCAAAGGTaGCATTGTGGGATTCAGGAGCCCGCAGGATCCTGG +
Preference number: 6 (lower is better)
Translates to: LLYSAGSQRSQR*HCGIQEPAGSW
Trigger: CCAGGATCCTGCGGGCTCCTGAATCCCACAATGTCACCTTTGGCTCCTTTGTGACCCTGCACTGTACAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS TCA 72 bp GGCAGGAGAGGATGTTGCCATCTCGCACGTAGTAAATaGCCTCCTCATGGGCCATCCCATAGTAGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: GRRGCCHLARSK*PPHGPSHSRAA
Trigger: TGCAGCCCTACTATGGGATGGCCCATGAGGAGGTCATTTACTACGTGCGAGATGGCAACATCCTCTCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 72 bp CCCTCTGCCCTCTCACACATGCGTTCCAGAATTCGGTaGATACTGGTGAAACTGGGTCTGTCTGCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: PSALSHMRSRIR*ILVKLGLSAGS
Trigger: GCTGCCTGCAGACAGACCCAGTTTCACCAGTATTCACCGAATTCTGGAACGCATGTGTGAGAGGGCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CCA 72 bp GGGGTCCCAATGCATGCTGGGAAGCTTGCTGCATTCTaGCACGGACAGCAAATGCATCTCGGATCTGTAGAG +
Preference number: 6 (lower is better)
Translates to: GVPMHAGKLAAF*HGQQMHLGSVE
Trigger: CTCTACAGATCCGAGATGCATTTGCTGTCCGTGCCAGAATGCAGCAAGCTTCCCAGCATGCATTGGGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CCA 72 bp GTTACACAACAAAGCCTCAGCAGCTGGCCGGCAGACTaGGCTCACTACTTTCAGTTCATTCCAGGCCGTGTG +
Preference number: 6 (lower is better)
Translates to: VTQQSLSSWPAD*AHYFQFIPGRV
Trigger: CACACGGCCTGGAATGAACTGAAAGTAGTGAGCCCAGTCTGCCGGCCAGCTGCTGAGGCTTTGTTGTGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS TCA 72 bp GGGTTGTCAAATTCTGCCATGAGGGCTGCCTCCCTCTaGAAGTCCGCTTGCATATCTGCCGAGGCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: GLSNSAMRAASL*KSACISAEASS
Trigger: AGAAGAAGCCTCGGCAGATATGCAAGCGGACTTTCAGAGGGAGGCAGCCCTCATGGCAGAATTTGACAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 72 bp GTGATGGTGGGGACAGGAATGCCTGTTGCTGTACAGTaGAGGGTCACAAAGGAGCCAAAGGTGACATTGTGG +
Preference number: 6 (lower is better)
Translates to: VMVGTGMPVAVQ*RVTKEPKVTLW
Trigger: CCACAATGTCACCTTTGGCTCCTTTGTGACCCTGCACTGTACAGCAACAGGCATTCCTGTCCCCACCATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS GCA 72 bp GAGGGCTGCCTCCCTCTGAAAGTCCGCTTGCATATCTaGCGAGGCTTCTTCTTTGAGCATCTTTACTGCCAC +
Preference number: 6 (lower is better)
Translates to: EGCLPLKVRLHI*RGFFFEHLYCH
Trigger: GTGGCAGTAAAGATGCTCAAAGAAGAAGCCTCGGCAGATATGCAAGCGGACTTTCAGAGGGAGGCAGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 72 bp GCTCTTGGGCCTCCTCAGGGTCCGCATAGGAGGTGTTaGGAAAAACAAGAGCATCTTTTGCCAGGACTGCAT +
Preference number: 6 (lower is better)
Translates to: ALGPPQGPHRRC*EKQEHLLPGLH
Trigger: ATGCAGTCCTGGCAAAAGATGCTCTTGTTTTTCTCAACACCTCCTATGCGGACCCTGAGGAGGCCCAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS GCA 72 bp AACTCTCCACAGCTCCTCCCACACCATTGTTGGCCGTaGAGCAGTAAATGCCATCATCACTGTCTTCCACAC +
Preference number: 6 (lower is better)
Translates to: NSPQLLPHHCWP*SSKCHHHCLPH
Trigger: GTGTGGAAGACAGTGATGATGGCATTTACTGCTGCACGGCCAACAATGGTGTGGGAGGAGCTGTGGAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 72 bp GCAGTACTCTCTCCATTCTGCTATGCTGATGGTGGCTaGAGCCTTGGCAGTACTGAACTTCTCCCCATGCTT +
Preference number: 6 (lower is better)
Translates to: AVLSPFCYADGG*SLGSTELLPML
Trigger: AAGCATGGGGAGAAGTTCAGTACTGCCAAGGCTGCAGCCACCATCAGCATAGCAGAATGGAGAGAGTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000189978.10
CDS CCA 72 bp CTCCACAACTCTCCACAGCTCCTCCCACACCATTGTTaGCCGTGCAGCAGTAAATGCCATCATCACTGTCTT +
Preference number: 6 (lower is better)
Translates to: LHNSPQLLPHHC*PCSSKCHHHCL
Trigger: AAGACAGTGATGATGGCATTTACTGCTGCACGGCCAACAATGGTGTGGGAGGAGCTGTGGAGAGTTGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CCA 72 bp TGTTATAATCTAGATGTGGCAGTCTGGCACAGGCCGTaGGGTCCCAATGCATGCTGGGAAGCTTGCTGCATT +
Preference number: 6 (lower is better)
Translates to: CYNLDVAVWHRP*GPNACWEACCI
Trigger: AATGCAGCAAGCTTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCACATCTAGATTATAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS CAA 72 bp TTCTGCCATGAGGGCTGCCTCCCTCTGAAAGTCCGCTaGCATATCTGCCGAGGCTTCTTCTTTGAGCATCTT +
Preference number: 6 (lower is better)
Translates to: FCHEGCLPLKVR*HICRGFFFEHL
Trigger: AAGATGCTCAAAGAAGAAGCCTCGGCAGATATGCAAGCGGACTTTCAGAGGGAGGCAGCCCTCATGGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CAA 90 bp AAGAAGAGGAGGAGGAAGGCAGATTTGGAATGTCCACACTTGGCTTaGAGGACGTCATTGGTGGGAATGCTAGATGTGGCAGTCTGGCAC +
Preference number: 6 (lower is better)
Translates to: KKRRRKADLECPHLA*RTSLVGMLDVAVWH
Trigger: GTGCCAGACTGCCACATCTAGCATTCCCACCAATGACGTCCTCAAAGCCAAGTGTGGACATTCCAAATCTGCCTTCCTCCTCCTCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000416899.7
CDS CAA 90 bp GTTGTCAAATTCTGCCATGAGGGCTGCCTCCCTCTGAAAGTCCGCTaGCATATCTGCCGAGGCTTCTTCTTTGAGCATCTTTACTGCCAC +
Preference number: 6 (lower is better)
Translates to: VVKFCHEGCLPLKVR*HICRGFFFEHLYCH
Trigger: GTGGCAGTAAAGATGCTCAAAGAAGAAGCCTCGGCAGATATGCAAGCGGACTTTCAGAGGGAGGCAGCCCTCATGGCAGAATTTGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 72 bp AGAAGGAGCGGCATCCTCTGGTACATGGGGTTGGGATaGAGTCTATCTAGTAAGAGCTCAGAAGGCAGTGTG +
Preference number: 6 (lower is better)
Translates to: RRSGILWYMGLG*SLSSKSSEGSV
Trigger: CACACTGCCTTCTGAGCTCTTACTAGATAGACTTCATCCCAACCCCATGTACCAGAGGATGCCGCTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 72 bp TCTCACACATGCGTTCCAGAATTCGGTGAATACTGGTaGAACTGGGTCTGTCTGCAGGCAGCTTGCTCCAAC +
Preference number: 6 (lower is better)
Translates to: SHTCVPEFGEYW*NWVCLQAACSN
Trigger: GTTGGAGCAAGCTGCCTGCAGACAGACCCAGTTTCACCAGTATTCACCGAATTCTGGAACGCATGTGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 72 bp CACAATGTTAGGGTTGTCAAATTCTGCCATGAGGGCTaGCTCCCTCTGAAAGTCCGCTTGCATATCTGCCGA +
Preference number: 6 (lower is better)
Translates to: HNVRVVKFCHEG*LPLKVRLHICR
Trigger: TCGGCAGATATGCAAGCGGACTTTCAGAGGGAGGCAGCCCTCATGGCAGAATTTGACAACCCTAACATTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS GCA 72 bp CTGTGGTTTACTCCATTCTGCTATGCTGATGGTGGCTaGAGCCTTGGCAGTACTGAACTTCTCCCCATGCTT +
Preference number: 6 (lower is better)
Translates to: LWFTPFCYADGG*SLGSTELLPML
Trigger: AAGCATGGGGAGAAGTTCAGTACTGCCAAGGCTGCAGCCACCATCAGCATAGCAGAATGGAGTAAACCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS CCA 72 bp CTGGAAGATGTGGTTACACAACAAAGCCTCAGCAGCTaGCCGGCAGACTGGGCTCACTACTTTCAGTTCATT +
Preference number: 6 (lower is better)
Translates to: LEDVVTQQSLSS*PADWAHYFQFI
Trigger: AATGAACTGAAAGTAGTGAGCCCAGTCTGCCGGCCAGCTGCTGAGGCTTTGTTGTGTAACCACATCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374448.9
ENST00000416899.7
CDS GCA 72 bp GCAGTACTCTCTAAAATCTGCTATGCTGATGGTGGCTaGAGCCTTGGCAGTACTGAACTTCTCCCCATGCTT +
Preference number: 6 (lower is better)
Translates to: AVLSKICYADGG*SLGSTELLPML
Trigger: AAGCATGGGGAGAAGTTCAGTACTGCCAAGGCTGCAGCCACCATCAGCATAGCAGATTTTAGAGAGTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374440.7
CDS CAA 72 bp GGTCACCATAGGCCATGTATTCAAAGAGCAGGCACATaGGCTTCCCGACAGCACACACTCCTAATAGCTTCA +
Preference number: 6 (lower is better)
Translates to: GHHRPCIQRAGT*ASRQHTLLIAS
Trigger: TGAAGCTATTAGGAGTGTGTGCTGTCGGGAAGCCAATGTGCCTGCTCTTTGAATACATGGCCTATGGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CAA 90 bp AAGCAGTACTCTCTCCATTCTGCTATGCTGATGGTGGCTGCAGCCTaGGCAGTACTGAACTTCTCCCCATGCTTATTGGTAGCTATGCAT +
Preference number: 6 (lower is better)
Translates to: KQYSLHSAMLMVAAA*AVLNFSPCLLVAMH
Trigger: ATGCATAGCTACCAATAAGCATGGGGAGAAGTTCAGTACTGCCAAGGCTGCAGCCACCATCAGCATAGCAGAATGGAGAGAGTACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000189978.10
CDS CAA 90 bp CTCACATATTCAATGTTATTCCTTGGATACTCCAGGCTGAGCAATTaGGGGTTCAGAAGGAGCGGCATCCTCTGGTACATGGGGTTGGGA +
Preference number: 6 (lower is better)
Translates to: LTYSMLFLGYSRLSN*GFRRSGILWYMGLG
Trigger: TCCCAACCCCATGTACCAGAGGATGCCGCTCCTTCTGAACCCCAAATTGCTCAGCCTGGAGTATCCAAGGAATAACATTGAATATGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 72 bp ACCCAGAAGAAACAGCATTTCCGTTTTCAATCCAGGTaGTGGTGGGGACAGGAATGCCTGTTGCTGTACAGT +
Preference number: 6 (lower is better)
Translates to: TQKKQHFRFQSR*WWGQECLLLYS
Trigger: ACTGTACAGCAACAGGCATTCCTGTCCCCACCATCACCTGGATTGAAAACGGAAATGCTGTTTCTTCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS CCA 72 bp TCTGTACTGGGCGCAGTAGCCTTTGTTATCTTTCTGTaGTTTACTCCATTCTGCTATGCTGATGGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: SVLGAVAFVIFL*FTPFCYADGGC
Trigger: GCAGCCACCATCAGCATAGCAGAATGGAGTAAACCACAGAAAGATAACAAAGGCTACTGCGCCCAGTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS CCA 72 bp TTAGGTTTTCTTTGTTATAATCTAGATGTGGCAGTCTaGCACAGGCCGTGGGGTCCCAATGCATGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: LGFLCYNLDVAV*HRPWGPNACWE
Trigger: TTCCCAGCATGCATTGGGACCCCACGGCCTGTGCCAGACTGCCACATCTAGATTATAACAAAGAAAACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS CAA 72 bp TCAATGTTATTCCTTGGATACTCCAGGCTGAGCAATTaGGGGTTCAGAAGGAGCGGCATCCTCTGGTACATG +
Preference number: 6 (lower is better)
Translates to: SMLFLGYSRLSN*GFRRSGILWYM
Trigger: CATGTACCAGAGGATGCCGCTCCTTCTGAACCCCAAATTGCTCAGCCTGGAGTATCCAAGGAATAACATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CAA 90 bp TTCTGTGGTTTACTCCATTCTGCTATGCTGATGGTGGCTGCAGCCTaGGCAGTACTGAACTTCTCCCCATGCTTATTGGTAGCTATGCAT +
Preference number: 6 (lower is better)
Translates to: FCGLLHSAMLMVAAA*AVLNFSPCLLVAMH
Trigger: ATGCATAGCTACCAATAAGCATGGGGAGAAGTTCAGTACTGCCAAGGCTGCAGCCACCATCAGCATAGCAGAATGGAGTAAACCACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS CAA 90 bp AAGCAGTACTCTCTAAAATCTGCTATGCTGATGGTGGCTGCAGCCTaGGCAGTACTGAACTTCTCCCCATGCTTATTGGTAGCTATGCAT +
Preference number: 6 (lower is better)
Translates to: KQYSLKSAMLMVAAA*AVLNFSPCLLVAMH
Trigger: ATGCATAGCTACCAATAAGCATGGGGAGAAGTTCAGTACTGCCAAGGCTGCAGCCACCATCAGCATAGCAGATTTTAGAGAGTACTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374440.7
CDS CAA 72 bp AGAGGGCTGTCTCCCTTTATCCAAGACACTGATGGTTaGGGATTACCCATTGTAGTACATGGTAGGACTGCT +
Preference number: 6 (lower is better)
Translates to: RGLSPFIQDTDG*GLPIVVHGRTA
Trigger: AGCAGTCCTACCATGTACTACAATGGGTAATCCCAAACCATCAGTGTCTTGGATAAAGGGAGACAGCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374439.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CAA 90 bp TTTTCCCTGAGAGGGCTGTCTCCCTTTATCCAAGACACTGATGGTTaGGGATTACCCATTGTAGTACATGGTAGGACTGCTTTTAATCCC +
Preference number: 6 (lower is better)
Translates to: FSLRGLSPFIQDTDG*GLPIVVHGRTAFNP
Trigger: GGGATTAAAAGCAGTCCTACCATGTACTACAATGGGTAATCCCAAACCATCAGTGTCTTGGATAAAGGGAGACAGCCCTCTCAGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374439.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 72 bp GTAGAGTCCTGGCTTGGTGATAAACAGCTGCAGTCTTaGGTCAATCACTCGGTCTTTCACACTCTCTTGAAT +
Preference number: 6 (lower is better)
Translates to: VESWLGDKQLQS*VNHSVFHTLLN
Trigger: ATTCAAGAGAGTGTGAAAGACCGAGTGATTGACTCAAGACTGCAGCTGTTTATCACCAAGCCAGGACTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS TCA 72 bp TCACATATTCAATGTTATTCCTTGGATACTCCAGGCTaGGCAATTTGGGGTTCAGAAGGAGCGGCATCCTCT +
Preference number: 6 (lower is better)
Translates to: SHIQCYSLDTPG*AIWGSEGAASS
Trigger: AGAGGATGCCGCTCCTTCTGAACCCCAAATTGCTCAGCCTGGAGTATCCAAGGAATAACATTGAATATGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374438.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 72 bp GATAGCGTCGTTTTCATTAGCTTTGTAGTAGTCTGCTaGGTAGATGTTCCTGGAGAGGCCAAAGTCGGCAAT +
Preference number: 6 (lower is better)
Translates to: DSVVFISFVVVC*VDVPGEAKVGN
Trigger: ATTGCCGACTTTGGCCTCTCCAGGAACATCTACTCAGCAGACTACTACAAAGCTAATGAAAACGACGCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 72 bp AGTCTTGAGTCAATCACTCGGTCTTTCACACTCTCTTaGATGGACCCAGAAGAAACAGCATTTCCGTTTTCA +
Preference number: 6 (lower is better)
Translates to: SLESITRSFTLS*MDPEETAFPFS
Trigger: TGAAAACGGAAATGCTGTTTCTTCTGGGTCCATTCAAGAGAGTGTGAAAGACCGAGTGATTGACTCAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS CCA 72 bp TTGAGTCAATCACTCGGTCTTTCACACTCTCTTGAATaGACCCAGAAGAAACAGCATTTCCGTTTTCAATCC +
Preference number: 6 (lower is better)
Translates to: LSQSLGLSHSLE*TQKKQHFRFQS
Trigger: GGATTGAAAACGGAAATGCTGTTTCTTCTGGGTCCATTCAAGAGAGTGTGAAAGACCGAGTGATTGACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
ENST00000634612.1
CDS CAA 72 bp TTTTGCCACACATCGATACTGTCCTGCATCTTCCTTTaGTACGTTATGAATCCTCAAGCTCCCAGATTCAAG +
Preference number: 6 (lower is better)
Translates to: FCHTSILSCIFL*YVMNPQAPRFK
Trigger: CTTGAATCTGGGAGCTTGAGGATTCATAACGTACAAAAGGAAGATGCAGGACAGTATCGATGTGTGGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374439.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CAA 90 bp AAGAAGAGGAGGAGGAAGGCAGATTTGGAATGTCCACACTTGGCTTaGAGGACGTCATTGGTGGGAATGTTTTTAGGTTTTCTTTGTTAT +
Preference number: 6 (lower is better)
Translates to: KKRRRKADLECPHLA*RTSLVGMFLGFLCY
Trigger: ATAACAAAGAAAACCTAAAAACATTCCCACCAATGACGTCCTCAAAGCCAAGTGTGGACATTCCAAATCTGCCTTCCTCCTCCTCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374448.9
CDS TCA 72 bp CATCGATACTGTCCTGCATCTTCCTTTTGTACGTTATaGATCCTCAAGCTCCCAGATTCAAGAACTGCAATT +
Preference number: 6 (lower is better)
Translates to: HRYCPASSFCTL*ILKLPDSRTAI
Trigger: AATTGCAGTTCTTGAATCTGGGAGCTTGAGGATTCATAACGTACAAAAGGAAGATGCAGGACAGTATCGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000189978.10
ENST00000374439.1
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS TCA 72 bp GAAGTCTATCTAGTAAGAGCTCAGAAGGCAGTGTGGTaGGGGTTACTGCTGCTGATTCTCTTTTCTTATTTT +
Preference number: 6 (lower is better)
Translates to: EVYLVRAQKAVW*GLLLLILFSYF
Trigger: AAAATAAGAAAAGAGAATCAGCAGCAGTAACCCTCACCACACTGCCTTCTGAGCTCTTACTAGATAGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7
CDS CAA 72 bp ACTGAAAGTCAGGATCATTGTCAACCAGTTTCCAGCTaGGAAGATTTTTCTATGATCTTGGGGCTAATGGGT +
Preference number: 6 (lower is better)
Translates to: TESQDHCQPVSS*EDFSMILGLMG
Trigger: ACCCATTAGCCCCAAGATCATAGAAAAATCTTCCAAGCTGGAAACTGGTTGACAATGATCCTGACTTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374438.1
CDS GCA 72 bp GCAATAGAGAGTAGTTATGGTAAGAAGCACAAATATTaGAAAGCTGGACATGATGGAGATTATTACAGTCAT +
Preference number: 6 (lower is better)
Translates to: AIESSYGKKHKY*KAGHDGDYYSH
Trigger: ATGACTGTAATAATCTCCATCATGTCCAGCTTTGCAATATTTGTGCTTCTTACCATAACTACTCTCTATTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000189978.10
ENST00000374440.7
ENST00000374448.9
ENST00000416899.7