RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MUS81 (Homo sapiens)

Ensembl gene IDs: ENSG00000172732

Ensembl transcript IDs: ENST00000308110.9, ENST00000524647.5, ENST00000525006.1, ENST00000525147.5, ENST00000525224.5, ENST00000525768.5, ENST00000529374.5, ENST00000529742.1, ENST00000529786.1, ENST00000529857.5, ENST00000530111.1, ENST00000530282.1, ENST00000530928.5, ENST00000531905.1, ENST00000533035.5, ENST00000533519.1, ENST00000533555.5

Found 472 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCAGGAGGCTGGCAGGGGTGCTGTATCGATCCACCAGGGCTGCTaGCTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGC +
Preference number: 1 (lower is better)
Translates to: GQEAGRGAVSIHQGC*LLPTHSAHLHQLPG
Trigger: GCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGCCTCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR GCA 90 bp GGCGGCCAGGAGGCTGGCAGGGGTGCTGTATCGATCCACCAGGGCTaGTGCCTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTGCCG +
Preference number: 1 (lower is better)
Translates to: GGQEAGRGAVSIHQG*CLLPTHSAHLHQLP
Trigger: CGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGCCTCCTGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR GCA 90 bp CGATCCACCAGGGCTGCTGCCTTCTCCCCACTCACTCCGCGCACCTaGATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTA +
Preference number: 1 (lower is better)
Translates to: RSTRAAAFSPLTPRT*ISCRANTSRTDWAL
Trigger: TAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR GCA 90 bp CTCAGGTCAAGGGGCCGTAGCTGCAGTAGAGCTGGGATAAGGTCCTaGTCAGAGCAGGCCCCAGATTCCTGCAGGAAGAGAGGCAGCGAG +
Preference number: 1 (lower is better)
Translates to: LRSRGRSCSRAGIRS*SEQAPDSCRKRGSE
Trigger: CTCGCTGCCTCTCTTCCTGCAGGAATCTGGGGCCTGCTCTGAGCAGGACCTTATCCCAGCTCTACTGCAGCTACGGCCCCTTGACCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529742.1
3UTR GCA 90 bp AGGGCTGCTGCCTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTaGCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTTGATG +
Preference number: 1 (lower is better)
Translates to: RAAAFSPLTPRTCIS*RANTSRTDWALFLM
Trigger: CATCAAGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR-3UTR GCA 90 bp GGGCTGGGGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTCTCACTCCGCGCACCTaGATCAGCTGCCGGGCAAAC +
Preference number: 2 (lower is better)
Translates to: GLGAVSRHKLRSRGRSCSLTPRT*ISCRAN
Trigger: GTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAG...ACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCCCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR-3UTR GCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGGCAGCCCCAGTCCCTaGCACTCCCTCCAGGTTCCG +
Preference number: 2 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRGSPSP*HSLQVP
Trigger: CGGAACCTGGAGGGAGTGGCAGGGACTGGGGCTGCC...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529742.1
3UTR-3UTR GCA 90 bp GGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTAGAGCTGCGCACCTGCATCAGCTaGCGGGCAAACACTTCTCGC +
Preference number: 2 (lower is better)
Translates to: GLFHGISSGQGAVAAVELRTCIS*RANTSR
Trigger: GCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCG...CAGCTCTACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR-3UTR CCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGGGGACAGACGGGGGCTaGGGGCTGTTTCACGGCATA +
Preference number: 2 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGGTDGG*GLFHGI
Trigger: TATGCCGTGAAACAGCCCCCAGCCCCCGTCTGTCCC...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACCTGGCTAGCCTGGGTTaGGGGACAGACGGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYLASLG*GTDGGW
Trigger: CCAGCCCCCGTCTGTCCCCCAACCCAGGCTAGCCAG...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR TCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTGCAATGCCCCACTaGCTCCATCTCCCTGACCAG +
Preference number: 2 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRAAMPH*LHLPDQ
Trigger: CTGGTCAGGGAGATGGAGTCAGTGGGGCATTGCAGC...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR GCA 90 bp GGGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTAGAGCTTCAAGGGGCCGTAGCTaGAGTAGAGCTGGGATAAGG +
Preference number: 2 (lower is better)
Translates to: GAVSRHKLRSRGRSCSRASRGRS*SRAGIR
Trigger: CCTTATCCCAGCTCTACTGCAGCTACGGCCCCTTGA...AGCTCTACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524647.5
ENST00000529742.1
3UTR-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACGGGACAGACGGGGGCTaGGGGCTGTTTCACGGCATA +
Preference number: 2 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYGTDGG*GLFHGI
Trigger: TATGCCGTGAAACAGCCCCCAGCCCCCGTCTGTCCC...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR CCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCGGGACAGACGGGGGCTaGGGGCTGTTTCACGGCATA +
Preference number: 2 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFGTDGG*GLFHGI
Trigger: TATGCCGTGAAACAGCCCCCAGCCCCCGTCTGTCCC...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACAAAGGCTGGCTAGCCTaGGTTGGGGGACAGACGGGG +
Preference number: 2 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYKGWLA*VGGQTG
Trigger: CCCCGTCTGTCCCCCAACCCAGGCTAGCCAGCCTTT...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR CCA 90 bp GGGCTGGGGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTATGTTGTTAAAAGGCTaGCTAGCCTGGGTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: GLGAVSRHKLRSRGRSCSMLLKG*LAWVGG
Trigger: TCCCCCAACCCAGGCTAGCCAGCCTTTTAACAACAT...ACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCCCCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000524647.5
ENST00000529742.1
3UTR-3UTR GCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTGGGATAAGGTCCTaGTCAGAGCAGGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRAGIRS*SEQAPD
Trigger: ATCTGGGGCCTGCTCTGAGCAGGACCTTATCCCAGC...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524647.5
ENST00000529742.1
3UTR-3UTR CCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATCTGGCTAGCCTGGGTTaGGGGACAGACGGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYLASLG*GTDGGW
Trigger: CCAGCCCCCGTCTGTCCCCCAACCCAGGCTAGCCAG...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR GCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGATTCCAAGCTGCAATaGCCCACTGACTCCATCTCC +
Preference number: 2 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRDSKLQ*PTDSIS
Trigger: GGAGATGGAGTCAGTGGGGCATTGCAGCTTGGAATC...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR GCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTCAAGGGGCCGTAGCTaGAGTAGAGCTGGGATAAGG +
Preference number: 2 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFSRGRS*SRAGIR
Trigger: CCTTATCCCAGCTCTACTGCAGCTACGGCCCCTTGA...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524647.5
ENST00000529742.1
3UTR-3UTR CCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGATGTTGTTAAAAGGCTaGCTAGCCTGGGTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGMLLKG*LAWVGG
Trigger: TCCCCCAACCCAGGCTAGCCAGCCTTTTAACAACAT...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR TCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGCTGCAATGCCCCACTaGCTCCATCTCCCTGACCAG +
Preference number: 2 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYAAMPH*LHLPDQ
Trigger: CTGGTCAGGGAGATGGAGTCAGTGGGGCATTGCAGC...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR GCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACGGTATCCCTGGTTCCTaGGTATTTCACAAGGTCCCC +
Preference number: 2 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYGIPGS*VFHKVP
Trigger: GGGGACCTTGTGAAATACGCAGGAACCAGGGATACC...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR GCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGGGTATCCCTGGTTCCTaGGTATTTCACAAGGTCCCC +
Preference number: 2 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMGIPGS*VFHKVP
Trigger: GGGGACCTTGTGAAATACGCAGGAACCAGGGATACC...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR CCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATAAAGGCTGGCTAGCCTaGGTTGGGGGACAGACGGGG +
Preference number: 2 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDKGWLA*VGGQTG
Trigger: CCCCGTCTGTCCCCCAACCCAGGCTAGCCAGCCTTT...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR CCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGAAAGGCTGGCTAGCCTaGGTTGGGGGACAGACGGGG +
Preference number: 2 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKKGWLA*VGGQTG
Trigger: CCCCGTCTGTCCCCCAACCCAGGCTAGCCAGCCTTT...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR CCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCATGTTGTTAAAAGGCTaGCTAGCCTGGGTTGGGGGA +
Preference number: 2 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFMLLKG*LAWVGG
Trigger: TCCCCCAACCCAGGCTAGCCAGCCTTTTAACAACAT...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR TCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGCTGCAATGCCCCACTaGCTCCATCTCCCTGACCAG +
Preference number: 2 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKAAMPH*LHLPDQ
Trigger: CTGGTCAGGGAGATGGAGTCAGTGGGGCATTGCAGC...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR GCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATGCTGGGATAAGGTCCTaGTCAGAGCAGGCCCCAGAT +
Preference number: 2 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDAGIRS*SEQAPD
Trigger: ATCTGGGGCCTGCTCTGAGCAGGACCTTATCCCAGC...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524647.5
ENST00000529742.1
3UTR-3UTR GCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGATCCACCAGGGCTGCTaGCTTCTCCCCACTCACTCC +
Preference number: 2 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKIHQGC*LLPTHS
Trigger: GGAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGAT...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR-3UTR CCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATACTTCTCGCACCGACTaGGCCTTATTCTTGATGGCT +
Preference number: 2 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYTSRTD*ALFLMA
Trigger: AGCCATCAAGAATAAGGCCCAGTCGGTGCGAGAAGT...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR-3UTR CCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGAACCACTGGACCAGATaGTATCCCTGGTTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKNHWTR*YPWFLR
Trigger: ACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTT...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR GCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGCATGACACATATGGCTaGAAACACTTAGATTCTAAT +
Preference number: 2 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMHDTYG*KHLDSN
Trigger: ATTAGAATCTAAGTGTTTGCAGCCATATGTGTCATG...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR CCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCACCAGATGGTATCCCTaGTTCCTGCGTATTTCACAA +
Preference number: 2 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVTRWYP*FLRISQ
Trigger: TTGTGAAATACGCAGGAACCAGGGATACCATCTGGT...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR TCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCATGAGGACCAACTGGTaGCATAAAATAGATTCCAAG +
Preference number: 2 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVMRTNW*HKIDSK
Trigger: CTTGGAATCTATTTTATGTCACCAGTTGGTCCTCAT...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR-3UTR GCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATCATGACACATATGGCTaGAAACACTTAGATTCTAAT +
Preference number: 2 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYHDTYG*KHLDSN
Trigger: ATTAGAATCTAAGTGTTTGCAGCCATATGTGTCATG...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
3UTR GCA 72 bp AGGGCTGCTGCCTTCTCCCCACTCACTCCGCGCACCTaGATCAGCTGCCGGGCAAACACTTCTCGCACCGAC +
Preference number: 3 (lower is better)
Translates to: RAAAFSPLTPRT*ISCRANTSRTD
Trigger: GTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR GCA 72 bp GCTGGCAGGGGTGCTGTATCGATCCACCAGGGCTGCTaGCTTCTCCCCACTCACTCCGCGCACCTGCATCAG +
Preference number: 3 (lower is better)
Translates to: AGRGAVSIHQGC*LLPTHSAHLHQ
Trigger: CTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR GCA 72 bp GCCTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTaGCGGGCAAACACTTCTCGCACCGACTGGGCCTTA +
Preference number: 3 (lower is better)
Translates to: AFSPLTPRTCIS*RANTSRTDWAL
Trigger: TAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR-3UTR CAA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACGACTGGGCCTTATTCTaGATGGCTCCTGCGTTGAAG +
Preference number: 3 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYDWALF*MAPALK
Trigger: CTTCAACGCAGGAGCCATCAAGAATAAGGCCCAGTC...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
3UTR GCA 72 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTaGGTATTTCACAAGGTCCCCAGGGCTAGGCATCTT +
Preference number: 3 (lower is better)
Translates to: LKTTGPDGIPGS*VFHKVPRARHL
Trigger: AAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp CAGGGCTGCTGCCTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGCGGTGAGTCCGGGGCATaGTCACCGCCCGATGTTCGG +
Preference number: 4 (lower is better)
Translates to: QGCCLLPTHSAHLHQLPGGESGA*SPPDVR
Trigger: CCGAACATCGGGCGGTGACCATGCCCCGGACTCACC...GCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp CAGGGCTGCTGCCTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGCCCCCAGGGGGCTCCTTaGGCCCGATGCCCACATTCA +
Preference number: 4 (lower is better)
Translates to: QGCCLLPTHSAHLHQLPGPQGAP*ARCPHS
Trigger: TGAATGTGGGCATCGGGCCCAAGGAGCCCCCTGGGG...GCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR TCA 90 bp CAGGGCTGCTGCCTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGCGCCCTCTGGGGTCAATaGGTACCTGGCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QGCCLLPTHSAHLHQLPGALWGQ*VPGWLV
Trigger: CACCAGCCAGCCAGGTACTCATTGACCCCAGAGGGC...GCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR GCA 90 bp GGCGGCCAGGAGGCTGGCAGGGGTGCTGTATCGATCCACCAGGGCTGCTGCCTTCTCACTCCGCGCACCTaGATCAGCTGCCGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: GGQEAGRGAVSIHQGCCLLTPRT*ISCRAN
Trigger: GTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAG...AAGGCAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGCCTCCTGGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR GCA 90 bp CAGGGCTGCTGCCTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGCGTGTTGGTGACAGCCTaGAGCAGTGTGCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QGCCLLPTHSAHLHQLPGVLVTA*SSVLSG
Trigger: TCCTGAGAGCACACTGCTGCAGGCTGTCACCAACAC...GCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp CCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACAGAGCCTCCCGCTTTaGGCTGGGCAGGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: PTHSAHLHQLPGKHFSHRQSLPL*AGQELA
Trigger: TGCCAGTTCCTGCCCAGCCCAAAGCGGGAGGCTCTG...TCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR GCA 90 bp CTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGCAAACACTTCTCGGATGTTCGGTGCCGCTaGAGCCGCTCGTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: LLPTHSAHLHQLPGKHFSDVRCR*SRSSSI
Trigger: GATGCTGGACGAGCGGCTGCAGCGGCACCGAACATC...CGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp CTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGCAAACACTTCTCGAGGCGGCCAGGAGGCTaGCAGGGGTGCTGTATCGAT +
Preference number: 4 (lower is better)
Translates to: LLPTHSAHLHQLPGKHFSRRPGG*QGCCID
Trigger: ATCGATACAGCACCCCTGCCAGCCTCCTGGCCGCCT...CGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp GGGCTGGGGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTGGGACAGACGGGGGCTaGGGGCTGTTTCACGGCATA +
Preference number: 4 (lower is better)
Translates to: GLGAVSRHKLRSRGRSCSGTDGG*GLFHGI
Trigger: TATGCCGTGAAACAGCCCCCAGCCCCCGTCTGTCCC...ACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCCCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000524647.5
ENST00000529742.1
CDS-3UTR CCA 90 bp GCACCTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTCTGGCTAGCCTGGGTTaGGGGACAGACGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: APASAAGQTLLAPTGPYSLASLG*GTDGGW
Trigger: CCAGCCCCCGTCTGTCCCCCAACCCAGGCTAGCCAG...AGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp GGGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTAGAGCTCTGGCTAGCCTGGGTTaGGGGACAGACGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GAVSRHKLRSRGRSCSRALASLG*GTDGGW
Trigger: CCAGCCCCCGTCTGTCCCCCAACCCAGGCTAGCCAG...AGCTCTACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000524647.5
ENST00000529742.1
CDS-3UTR TCA 90 bp GGGCTGGGGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTGCTGCAATGCCCCACTaGCTCCATCTCCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: GLGAVSRHKLRSRGRSCSAAMPH*LHLPDQ
Trigger: CTGGTCAGGGAGATGGAGTCAGTGGGGCATTGCAGC...ACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCCCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524647.5
ENST00000529742.1
CDS-3UTR GCA 90 bp GGCGGCCAGGAGGCTGGCAGGGGTGCTGTATCGATCCACCAGGGCTGCTGCCTTACAAAATCTCCAACGTaGAGCTTGCGCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: GGQEAGRGAVSIHQGCCLTKSPT*SLRTVW
Trigger: CCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGT...AAGGCAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGCCTCCTGGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGAGGGAGCGGAGGGCTaGCCAGGGTCGAGCACTCCC +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPREGAEG*PGSSTP
Trigger: GGGAGTGCTCGACCCTGGCCAGCCCTCCGCTCCCTC...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp GGCGGCCAGGAGGCTGGCAGGGGTGCTGTATCGATCCACCAGGGCTGCTGCCTTAACCACTGGACCAGATaGTATCCCTGGTTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GGQEAGRGAVSIHQGCCLNHWTR*YPWFLR
Trigger: ACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTT...AAGGCAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGCCTCCTGGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR GCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCCCGCCCGATGTTCGGTaGCGCTGCAGCCGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFPPDVR*RCSRSS
Trigger: GGACGAGCGGCTGCAGCGGCACCGAACATCGGGCGG...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp CGCACCTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCATCCACCAGGGCTGCTaGCTTCTCCCCACTCACTCC +
Preference number: 4 (lower is better)
Translates to: RTCISCRANTSRTDWALFIHQGC*LLPTHS
Trigger: GGAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGAT...GAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR GCA 90 bp GCCAGGAGGCTGGCAGGGGTGCTGTATCGATCCACCAGGGCTGCTGCCTTCTCCGGTATCCCTGGTTCCTaGGTATTTCACAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: ARRLAGVLYRSTRAAAFSGIPGS*VFHKVP
Trigger: GGGGACCTTGTGAAATACGCAGGAACCAGGGATACC...GGAGAAGGCAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGCCTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR GCA 90 bp GGGCTGGGGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTCCAGGTTCCGTCTCTTaGCCTCACCTCTGTAGACGC +
Preference number: 4 (lower is better)
Translates to: GLGAVSRHKLRSRGRSCSPGSVS*PHLCRR
Trigger: GCGTCTACAGAGGTGAGGGCAAGAGACGGAACCTGG...ACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCCCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529742.1
CDS-3UTR CCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGGAGGGAGCGGAGGGCTaGCCAGGGTCGAGCACTCCC +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMEGAEG*PGSSTP
Trigger: GGGAGTGCTCGACCCTGGCCAGCCCTCCGCTCCCTC...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp CTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGCAAACACTTCTCGGGACCCCTGCTTCACTaGCAAGCTCTGCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLPTHSAHLHQLPGKHFSGPLLH*QALLKL
Trigger: CAGCTTCAGCAGAGCTTGCCAGTGAAGCAGGGGTCC...CGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR TCA 90 bp GGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTAGAGCTGGAACGCAGCGCCTTCTaGAATACGAAGCGCGTGCGG +
Preference number: 4 (lower is better)
Translates to: GLFHGISSGQGAVAAVELERSAF*NTKRVR
Trigger: CCGCACGCGCTTCGTATTTCAGAAGGCGCTGCGTTC...CAGCTCTACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR GCA 90 bp CCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGAAGCCCGTCTCCGAAGTaGTGTAGGATCTTAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PTHSAHLHQLPGKHFSHRSPSPK*CRILAS
Trigger: GGAAGCTAAGATCCTACAGCACTTCGGAGACGGGCT...TCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR GCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGTTCAGCCGGAACTTCTaGTCCCGGAAGCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGFSRNF*SRKRPS
Trigger: CGACGGCCGCTTCCGGGAGCAGAAGTTCCGGCTGAA...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGGCTGCGCAGCGGCAGTaGGTACCGTCGGAGGGAACG +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMAAQRQ*VPSEGT
Trigger: CGTTCCCTCCGACGGTACCCACTGCCGCTGCGCAGC...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCGCTGCGCAGCGGCAGTaGGTACCGTCGGAGGGAACG +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFAAQRQ*VPSEGT
Trigger: CGTTCCCTCCGACGGTACCCACTGCCGCTGCGCAGC...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp GGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTAGAGCTGGGCATGGAAGAGTCCTaGACTTCCGCAAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: GLFHGISSGQGAVAAVELGMEES*TSASRP
Trigger: GGGGCGACTTGCGGAAGTCCAGGACTCTTCCATGCC...CAGCTCTACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCAGAGCCTCCCGCTTTaGGCTGGGCAGGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGQSLPL*AGQELA
Trigger: TGCCAGTTCCTGCCCAGCCCAAAGCGGGAGGCTCTG...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp CATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTTGATGGCTCCCAGGGGCTACCCTaGGGGACTTCTGAGCACACC +
Preference number: 4 (lower is better)
Translates to: HQLPGKHFSHRLGLILDGSQGLP*GTSEHT
Trigger: GGTGTGCTCAGAAGTCCCCCAGGGTAGCCCCTGGGA...GCCATCAAGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp GCACCTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTTCCAGTGGCTGCTGCTaGACCCCTGCTTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: APASAAGQTLLAPTGPYSSSGCC*TPASLA
Trigger: TGCCAGTGAAGCAGGGGTCCAGCAGCAGCCACTGGA...AGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGAGCTTGCGCACCGTGTaGGTCACGTGCAGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGSLRTV*VTCSRC
Trigger: ACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCT...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGCTGGCTAGCCTGGGTTaGGGGACAGACGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMLASLG*GTDGGW
Trigger: CCAGCCCCCGTCTGTCCCCCAACCCAGGCTAGCCAG...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR TCA 90 bp CATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTTGATGGCTATCACTCGGGCTCCTaGGTGCCGAGCTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: HQLPGKHFSHRLGLILDGYHSGS*VPSWPV
Trigger: TACTGGCCAGCTCGGCACTCAGGAGCCCGAGTGATA...GCCATCAAGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR TCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGAGGACCAGGTTCCTGTaGAGGAGGGAGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRRTRFL*RRERRA
Trigger: AGCCCTCCGCTCCCTCCTTCACAGGAACCTGGTCCT...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp CATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTTGATGGCACTGGCAAGCTCTGCTaGAGCTGCTCCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: HQLPGKHFSHRLGLILDGTGKLC*SCSWHC
Trigger: GCAGTGCCAGGAGCAGCTTCAGCAGAGCTTGCCAGT...GCCATCAAGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR TCA 90 bp GCACCTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTGGCCAGGTAGGCGGCTaGCTCCTTAATGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: APASAAGQTLLAPTGPYSGQVGG*LLNVCC
Trigger: ACAGCAGACATTAAGGAGTCAGCCGCCTACCTGGCC...AGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR GCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACGAAATACGAAGCGCGTaGGGCGCCTGCTGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYEIRSA*GACCGS
Trigger: CGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTC...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR GCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGAGCTGGCCAGTAGCTaGCAGAGCCTCCCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRELASS*QSLPLW
Trigger: CCAAAGCGGGAGGCTCTGGCAGCTACTGGCCAGCTC...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGTTCAGCCGGAACTTCTaGTCCCGGAAGCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRFSRNF*SRKRPS
Trigger: CGACGGCCGCTTCCGGGAGCAGAAGTTCCGGCTGAA...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCGCACCTGCATCAGCTaGCGGGCAAACACTTCTCGC +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGRTCIS*RANTSR
Trigger: GCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCG...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGCTCACTCCGCGCACCTaGATCAGCTGCCGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRLTPRT*ISCRAN
Trigger: GTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAG...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp CTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGCAAACACTTCTCGGATTCCAAGCTGCAATaGCCCACTGACTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: LLPTHSAHLHQLPGKHFSDSKLQ*PTDSIS
Trigger: GGAGATGGAGTCAGTGGGGCATTGCAGCTTGGAATC...CGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCCCACGCCCGCGGGACTaGGACGCCGCCAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGPRPRD*DAASSG
Trigger: TCCAGAACTGGCGGCGTCCCAGTCCCGCGGGCGTGG...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR CCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCGGTGAGTCCGGGGCATaGTCACCGCCCGATGTTCGG +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFGESGA*SPPDVR
Trigger: CCGAACATCGGGCGGTGACCATGCCCCGGACTCACC...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCCCCCAGGGGGCTCCTTaGGCCCGATGCCCACATTCA +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFPQGAP*ARCPHS
Trigger: TGAATGTGGGCATCGGGCCCAAGGAGCCCCCTGGGG...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACCCCCAGGGGGCTCCTTaGGCCCGATGCCCACATTCA +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYPQGAP*ARCPHS
Trigger: TGAATGTGGGCATCGGGCCCAAGGAGCCCCCTGGGG...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp CGCACCTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCGGAAGGCTGAGGTTGTaGACGGAACCATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RTCISCRANTSRTDWALFGRLRL*TEPCSS
Trigger: GGAAGAGCATGGTTCCGTCCACAACCTCAGCCTTCC...GAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGAGGCGGCCAGGAGGCTaGCAGGGGTGCTGTATCGAT +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRRRPGG*QGCCID
Trigger: ATCGATACAGCACCCCTGCCAGCCTCCTGGCCGCCT...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp GGGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTAGAGCTCTTGTTCCTTGGGGGTaGCACAGGCATCATAGGCGG +
Preference number: 4 (lower is better)
Translates to: GAVSRHKLRSRGRSCSRALVPWG*HRHHRR
Trigger: CCGCCTATGATGCCTGTGCCACCCCCAAGGAACAAG...AGCTCTACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524647.5
ENST00000529742.1
CDS-3UTR CCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGGGACAGACGGGGGCTaGGGGCTGTTTCACGGCATA +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRGTDGG*GLFHGI
Trigger: TATGCCGTGAAACAGCCCCCAGCCCCCGTCTGTCCC...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGAAAGGCTGGCTAGCCTaGGTTGGGGGACAGACGGGG +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRKGWLA*VGGQTG
Trigger: CCCCGTCTGTCCCCCAACCCAGGCTAGCCAGCCTTT...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR TCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGAGGACCAGGTTCCTGTaGAGGAGGGAGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMRTRFL*RRERRA
Trigger: AGCCCTCCGCTCCCTCCTTCACAGGAACCTGGTCCT...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCGCCCTCTGGGGTCAATaGGTACCTGGCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFALWGQ*VPGWLV
Trigger: CACCAGCCAGCCAGGTACTCATTGACCCCAGAGGGC...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGGGAAGCGGCCGTCGATaGTGCTGCTGCAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGGSGRR*CCCKGH
Trigger: ATGACCTTTGCAGCAGCATCATCGACGGCCGCTTCC...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCGATGTTCGGTGCCGCTaGAGCCGCTCGTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFDVRCR*SRSSSI
Trigger: GATGCTGGACGAGCGGCTGCAGCGGCACCGAACATC...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACGAGCTGGCCAGTAGCTaGCAGAGCCTCCCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYELASS*QSLPLW
Trigger: CCAAAGCGGGAGGCTCTGGCAGCTACTGGCCAGCTC...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGGCTCCTTGGGCCCGATaGCCACATTCAGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGAPWAR*PHSASS
Trigger: TGAGCTTGCTGAATGTGGGCATCGGGCCCAAGGAGC...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACACCGTGTGGGTCACGTaGAGCCGCTGTAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYTVWVT*SRCSSR
Trigger: CCGAGAGCTACAGCGGCTGCACGTGACCCACACGGT...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACTTCAGCCGGAACTTCTaGTCCCGGAAGCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYFSRNF*SRKRPS
Trigger: CGACGGCCGCTTCCGGGAGCAGAAGTTCCGGCTGAA...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACCTCACTCCGCGCACCTaGATCAGCTGCCGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYLTPRT*ISCRAN
Trigger: GTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAG...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGATCCACCAGGGCTGCTaGCTTCTCCCCACTCACTCC +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRIHQGC*LLPTHS
Trigger: GGAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGAT...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACGGAGGCTGGCAGGGGTaGTGTATCGATCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYGGWQG*CIDPPG
Trigger: CCCTGGTGGATCGATACAGCACCCCTGCCAGCCTCC...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCGGAGGCTGGCAGGGGTaGTGTATCGATCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFGGWQG*CIDPPG
Trigger: CCCTGGTGGATCGATACAGCACCCCTGCCAGCCTCC...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCGCTGCGCAGCGGCAGTaGGTACCGTCGGAGGGAACG +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGAAQRQ*VPSEGT
Trigger: CGTTCCCTCCGACGGTACCCACTGCCGCTGCGCAGC...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGGGGCAGGAACTGGCATaGAAGAGTCCTGGACTTCCG +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGGQELA*KSPGLP
Trigger: CGGAAGTCCAGGACTCTTCCATGCCAGTTCCTGCCC...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGGGACCCCTGCTTCACTaGCAAGCTCTGCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGGPLLH*QALLKL
Trigger: CAGCTTCAGCAGAGCTTGCCAGTGAAGCAGGGGTCC...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACAGCTTGCGCACCGTGTaGGTCACGTGCAGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYSLRTV*VTCSRC
Trigger: ACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCT...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACAGGCGGCCAGGAGGCTaGCAGGGGTGCTGTATCGAT +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYRRPGG*QGCCID
Trigger: ATCGATACAGCACCCCTGCCAGCCTCCTGGCCGCCT...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCAGGCGGCCAGGAGGCTaGCAGGGGTGCTGTATCGAT +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFRRPGG*QGCCID
Trigger: ATCGATACAGCACCCCTGCCAGCCTCCTGGCCGCCT...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR TCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTATCACTCGGGCTCCTaGGTGCCGAGCTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFYHSGS*VPSWPV
Trigger: TACTGGCCAGCTCGGCACTCAGGAGCCCGAGTGATA...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCCAAGCTCAGGCCTTCTaGCTCGGCCAACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFQAQAF*LGQLLG
Trigger: GCCCAGAAGTTGGCCGAGTCAGAAGGCCTGAGCTTG...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACTGGCAAGCTCTGCTaGAGCTGCTCCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMTGKLC*SCSWHC
Trigger: GCAGTGCCAGGAGCAGCTTCAGCAGAGCTTGCCAGT...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGGAAGCGGCCGTCGATaGTGCTGCTGCAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRGSGRR*CCCKGH
Trigger: ATGACCTTTGCAGCAGCATCATCGACGGCCGCTTCC...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGTGCTCTCAGGAAGGCTaGGGTTGTGGACGGAACCAT +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGCSQEG*GCGRNH
Trigger: ATGGTTCCGTCCACAACCTCAGCCTTCCTGAGAGCA...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp GGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTAGAGCTGAAGCCATCAATGACCTaGGTGTTGGTGACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLFHGISSGQGAVAAVELKPSMT*VLVTAC
Trigger: GCAGGCTGTCACCAACACTCAGGTCATTGATGGCTT...CAGCTCTACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR TCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCCTTGGAGGAAATGGTaGTCCTCATCCCCGGGATAC +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGPWRKW*SSSPGY
Trigger: GTATCCCGGGGATGAGGATCACCATTTCCTCCAAGG...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS-3UTR GCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTCCGCCCGATGTTCGGTaGCGCTGCAGCCGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTPPDVR*RCSRSS
Trigger: GGACGAGCGGCTGCAGCGGCACCGAACATCGGGCGG...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCGCCCGATGTTCGGTaGCGCTGCAGCCGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVPPDVR*RCSRSS
Trigger: GGACGAGCGGCTGCAGCGGCACCGAACATCGGGCGG...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACCTGCTGCTGGACCCCTaGTTCACTGGCAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYLLLDP*FTGKLC
Trigger: GCAGAGCTTGCCAGTGAAGCAGGGGTCCAGCAGCAG...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGCTGCTGCTGGACCCCTaGTTCACTGGCAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMLLLDP*FTGKLC
Trigger: GCAGAGCTTGCCAGTGAAGCAGGGGTCCAGCAGCAG...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACCTCAGCTCCAGTGGCTaGTGCTGGACCCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYLSSSG*CWTPAS
Trigger: TGAAGCAGGGGTCCAGCAGCAGCCACTGGAGCTGAG...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGCTCCAACGTGCAGCTTaGGCACCGTGTGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMLQRAA*APCGSR
Trigger: ACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAG...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp GGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTAGAGCTGGGTCATCCAGTCGCTTaGGCTCCACAATGTGATCCA +
Preference number: 4 (lower is better)
Translates to: GLFHGISSGQGAVAAVELGHPVA*APQCDP
Trigger: TGGATCACATTGTGGAGCGCAAGCGACTGGATGACC...CAGCTCTACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR GCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGCGCACCTGCATCAGCTaGCGGGCAAACACTTCTCGC +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMRTCIS*RANTSR
Trigger: GCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCG...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGATCCACCAGGGCTGCTaGCTTCTCCCCACTCACTCC +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMIHQGC*LLPTHS
Trigger: GGAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGAT...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGTCAAGGGGCCGTAGCTaGAGTAGAGCTGGGATAAGG +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGSRGRS*SRAGIR
Trigger: CCTTATCCCAGCTCTACTGCAGCTACGGCCCCTTGA...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCGGACGCCGCCAGTTCTaGAGTCGGGATTCGAACACC +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFGRRQF*SRDSNT
Trigger: GGTGTTCGAATCCCGACTCCAGAACTGGCGGCGTCC...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR CCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCGAACGAAGAGCGGGTTaGGACAGGCAGGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGERRAG*DRQAAG
Trigger: GCCCGCTGCCTGCCTGTCCCAACCCGCTCTTCGTTC...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACGGCATGGAAGAGTCCTaGACTTCCGCAAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYGMEES*TSASRP
Trigger: GGGGCGACTTGCGGAAGTCCAGGACTCTTCCATGCC...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCGAGGGAGCGGAGGGCTaGCCAGGGTCGAGCACTCCC +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVEGAEG*PGSSTP
Trigger: GGGAGTGCTCGACCCTGGCCAGCCCTCCGCTCCCTC...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp CATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTTGATGGCCTCCCCAGGGTTTGCTaGGTCTCTAGGATTGGTCTC +
Preference number: 4 (lower is better)
Translates to: HQLPGKHFSHRLGLILDGLPRVC*VSRIGL
Trigger: GAGACCAATCCTAGAGACCCAGCAAACCCTGGGGAG...GCCATCAAGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR TCA 90 bp CATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTTGATGGCTTGCGCTCCACAATGTaGTCCAGTACCAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: HQLPGKHFSHRLGLILDGLRSTM*SSTNSP
Trigger: TGGGGAGTTGGTACTGGATCACATTGTGGAGCGCAA...GCCATCAAGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR GCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTAACGAGAGGAGAGCCTaGGGCCGCCCTCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTNERRA*GRPPTP
Trigger: AGGGGTGGGAGGGCGGCCGCAGGCTCTCCTCTCGTT...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR GCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGACAAAATCTCCAACGTaGAGCTTGCGCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGTKSPT*SLRTVW
Trigger: CCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGT...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCTCGCCCCTGCGGGGCTaGACTGTTCTCTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGSPLRG*TVLSRW
Trigger: CCATCTGGAGAGAACAGTCCAGCCCCGCAGGGGCGA...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGGGGCAGGAACTGGCATaGAAGAGTCCTGGACTTCCG +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMGQELA*KSPGLP
Trigger: CGGAAGTCCAGGACTCTTCCATGCCAGTTCCTGCCC...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCTCCCAGGGGCTACCCTaGGGGACTTCTGAGCACACC +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGSQGLP*GTSEHT
Trigger: GGTGTGCTCAGAAGTCCCCCAGGGTAGCCCCTGGGA...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp GGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTAGAGCTGCTAGGATTGGTCTCCTaGGCCACCCACACAAAATCT +
Preference number: 4 (lower is better)
Translates to: GLFHGISSGQGAVAAVELLGLVS*ATHTKS
Trigger: AGATTTTGTGTGGGTGGCCCAGGAGACCAATCCTAG...CAGCTCTACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACCTTGTTCCTTGGGGGTaGCACAGGCATCATAGGCGG +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYLVPWG*HRHHRR
Trigger: CCGCCTATGATGCCTGTGCCACCCCCAAGGAACAAG...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATCTGGCTAGCCTGGGTTaGGGGACAGACGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDLASLG*GTDGGW
Trigger: CCAGCCCCCGTCTGTCCCCCAACCCAGGCTAGCCAG...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR TCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATACTCCAGCCAGCCTTTaGGACGCGCCCTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYTPASL*DAPFPS
Trigger: GCTGGGAAAGGGCGCGTCTCAAAGGCTGGCTGGAGT...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR TCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATAGGACCAGGTTCCTGTaGAGGAGGGAGCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYRTRFL*RRERRA
Trigger: AGCCCTCCGCTCCCTCCTTCACAGGAACCTGGTCCT...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGTTGCGCTCCACAATGTaGTCCAGTACCAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRLRSTM*SSTNSP
Trigger: TGGGGAGTTGGTACTGGATCACATTGTGGAGCGCAA...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGTGCTCTCAGGAAGGCTaGGGTTGTGGACGGAACCAT +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMCSQEG*GCGRNH
Trigger: ATGGTTCCGTCCACAACCTCAGCCTTCCTGAGAGCA...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACAATGGGTGCCGGGGATaGGGACACAAAGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYNGCRG*GHKGKA
Trigger: TGCCTTACCTTTGTGTCCTCATCCCCGGCACCCATT...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS-3UTR GCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCCTCCCACCCCTGCGCTaGTCTAAGTGGTTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGLPPLR*SKWLVR
Trigger: CCTGACCAACCACTTAGAGCAGCGCAGGGGTGGGAG...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR GCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGATGTTCGGTGCCGCTaGAGCCGCTCGTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYDVRCR*SRSSSI
Trigger: GATGCTGGACGAGCGGCTGCAGCGGCACCGAACATC...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCCGCACCTGCATCAGCTaGCGGGCAAACACTTCTCGC +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGRTCIS*RANTSR
Trigger: GCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCG...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATCTCACTCCGCGCACCTaGATCAGCTGCCGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYLTPRT*ISCRAN
Trigger: GTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAG...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGGTATCCCTGGTTCCTaGGTATTTCACAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRGIPGS*VFHKVP
Trigger: GGGGACCTTGTGAAATACGCAGGAACCAGGGATACC...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGGCAGCCCCAGTCCCTaGCACTCCCTCCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKGSPSP*HSLQVP
Trigger: CGGAACCTGGAGGGAGTGGCAGGGACTGGGGCTGCC...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529742.1
CDS-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACGCTGCTCTAAGTGGTTaGTCAGGGGCGCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYAALSG*SGALSL
Trigger: TAGAGACAGCGCCCCTGACCAACCACTTAGAGCAGC...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR CCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATGGTGAGTCCGGGGCATaGTCACCGCCCGATGTTCGG +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDGESGA*SPPDVR
Trigger: CCGAACATCGGGCGGTGACCATGCCCCGGACTCACC...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCGGCATGGAAGAGTCCTaGACTTCCGCAAGTCGCCCC +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGGMEES*TSASRP
Trigger: GGGGCGACTTGCGGAAGTCCAGGACTCTTCCATGCC...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCCCTCCCGCTTTGGGCTaGGCAGGAACTGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGPPALG*AGTGME
Trigger: TTCCATGCCAGTTCCTGCCCAGCCCAAAGCGGGAGG...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATTCCCAGGGGCTACCCTaGGGGACTTCTGAGCACACC +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYSQGLP*GTSEHT
Trigger: GGTGTGCTCAGAAGTCCCCCAGGGTAGCCCCTGGGA...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTAGGCCTCAGCTCCAGTaGCTGCTGCTGGACCCCTGC +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTRPQLQ*LLLDPC
Trigger: GCAGGGGTCCAGCAGCAGCCACTGGAGCTGAGGCCT...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATAGGCCTCAGCTCCAGTaGCTGCTGCTGGACCCCTGC +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDRPQLQ*LLLDPC
Trigger: GCAGGGGTCCAGCAGCAGCCACTGGAGCTGAGGCCT...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGCTCCCCAGGGTTTGCTaGGTCTCTAGGATTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMLPRVC*VSRIGL
Trigger: GAGACCAATCCTAGAGACCCAGCAAACCCTGGGGAG...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGGGAAGGCTGAGGTTGTaGACGGAACCATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMGRLRL*TEPCSS
Trigger: GGAAGAGCATGGTTCCGTCCACAACCTCAGCCTTCC...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATAAAGGCTGGCTAGCCTaGGTTGGGGGACAGACGGGG +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYKGWLA*VGGQTG
Trigger: CCCCGTCTGTCCCCCAACCCAGGCTAGCCAGCCTTT...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCCGGGTGCAAACGTATTaGTGGGAGGGACACCCAGAA +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFRVQTY*WEGHPE
Trigger: TTCTGGGTGTCCCTCCCACCAATACGTTTGCACCCG...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS-3UTR TCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGCGAGGGCAGGACCGTTaGGATCACGGGGCCCCAAAC +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKRGQDR*DHGAPN
Trigger: GTTTGGGGCCCCGTGATCTCAACGGTCCTGCCCTCG...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR TCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGAACGCAGCGCCTTCTaGAATACGAAGCGCGTGCGG +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYERSAF*NTKRVR
Trigger: CCGCACGCGCTTCGTATTTCAGAAGGCGCTGCGTTC...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000524647.5
CDS-3UTR TCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCGCCCTCTGGGGTCAATaGGTACCTGGCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVALWGQ*VPGWLV
Trigger: CACCAGCCAGCCAGGTACTCATTGACCCCAGAGGGC...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACTTGCGCTCCACAATGTaGTCCAGTACCAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYLRSTM*SSTNSP
Trigger: TGGGGAGTTGGTACTGGATCACATTGTGGAGCGCAA...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp GGGCTGGGGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTATGAGGACCAACTGGTaGCATAAAATAGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: GLGAVSRHKLRSRGRSCSMRTNW*HKIDSK
Trigger: CTTGGAATCTATTTTATGTCACCAGTTGGTCCTCAT...ACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCCCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524647.5
ENST00000529742.1
CDS-3UTR GCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCGAGCTGGCCAGTAGCTaGCAGAGCCTCCCGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVELASS*QSLPLW
Trigger: CCAAAGCGGGAGGCTCTGGCAGCTACTGGCCAGCTC...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCACCGTGTGGGTCACGTaGAGCCGCTGTAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVTVWVT*SRCSSR
Trigger: CCGAGAGCTACAGCGGCTGCACGTGACCCACACGGT...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCGGTCATCCAGTCGCTTaGGCTCCACAATGTGATCCA +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFGHPVA*APQCDP
Trigger: TGGATCACATTGTGGAGCGCAAGCGACTGGATGACC...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGAGGCTGGCAGGGGTaGTGTATCGATCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTGGWQG*CIDPPG
Trigger: CCCTGGTGGATCGATACAGCACCCCTGCCAGCCTCC...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATGGAGGCTGGCAGGGGTaGTGTATCGATCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDGGWQG*CIDPPG
Trigger: CCCTGGTGGATCGATACAGCACCCCTGCCAGCCTCC...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCGGTATCCCTGGTTCCTaGGTATTTCACAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFGIPGS*VFHKVP
Trigger: GGGGACCTTGTGAAATACGCAGGAACCAGGGATACC...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGGATTCCAAGCTGCAATaGCCCACTGACTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMDSKLQ*PTDSIS
Trigger: GGAGATGGAGTCAGTGGGGCATTGCAGCTTGGAATC...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTTCGCCCCTGCGGGGCTaGACTGTTCTCTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTSPLRG*TVLSRW
Trigger: CCATCTGGAGAGAACAGTCCAGCCCCGCAGGGGCGA...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATCCTCCCGCTTTGGGCTaGGCAGGAACTGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYPPALG*AGTGME
Trigger: TTCCATGCCAGTTCCTGCCCAGCCCAAAGCGGGAGG...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTCAGAGCCTCCCGCTTTaGGCTGGGCAGGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTQSLPL*AGQELA
Trigger: TGCCAGTTCCTGCCCAGCCCAAAGCGGGAGGCTCTG...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGAGGCCTCAGCTCCAGTaGCTGCTGCTGGACCCCTGC +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKRPQLQ*LLLDPC
Trigger: GCAGGGGTCCAGCAGCAGCCACTGGAGCTGAGGCCT...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCAGCTTGCGCACCGTGTaGGTCACGTGCAGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVSLRTV*VTCSRC
Trigger: ACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCT...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCCTTGTTCCTTGGGGGTaGCACAGGCATCATAGGCGG +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGLVPWG*HRHHRR
Trigger: CCGCCTATGATGCCTGTGCCACCCCCAAGGAACAAG...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACGTGTCTCTTGTTCCTTaGGGGTGGCACAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYVSLVP*GWHRHH
Trigger: ATGATGCCTGTGCCACCCCCAAGGAACAAGAGACAC...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGGTGTCTCTTGTTCCTTaGGGGTGGCACAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMVSLVP*GWHRHH
Trigger: ATGATGCCTGTGCCACCCCCAAGGAACAAGAGACAC...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTAAAGGCTGGCTAGCCTaGGTTGGGGGACAGACGGGG +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTKGWLA*VGGQTG
Trigger: CCCCGTCTGTCCCCCAACCCAGGCTAGCCAGCCTTT...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGATGTTGTTAAAAGGCTaGCTAGCCTGGGTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRMLLKG*LAWVGG
Trigger: TCCCCCAACCCAGGCTAGCCAGCCTTTTAACAACAT...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGAACCACTGGACCAGATaGTATCCCTGGTTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMNHWTR*YPWFLR
Trigger: ACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTT...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR TCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATTATCACTCGGGCTCCTaGGTGCCGAGCTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDYHSGS*VPSWPV
Trigger: TACTGGCCAGCTCGGCACTCAGGAGCCCGAGTGATA...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGTTGGTTAAGAAGTGGTaGCCATTAGGATTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGLVKKW*PLGFRC
Trigger: GCACCTGAATCCTAATGGTCACCACTTCTTAACCAA...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATCAAGCTCAGGCCTTCTaGCTCGGCCAACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDQAQAF*LGQLLG
Trigger: GCCCAGAAGTTGGCCGAGTCAGAAGGCCTGAGCTTG...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCCAGGTAGGCGGCTaGCTCCTTAATGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYGQVGG*LLNVCC
Trigger: ACAGCAGACATTAAGGAGTCAGCCGCCTACCTGGCC...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTAGAGGTCATGGCCCCTaGTTCAGGGTTCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTRGHGP*FRVPRG
Trigger: ACCCCTGGGAACCCTGAATCAGGGGCCATGACCTCT...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000533035.5
CDS-3UTR TCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGCTGCAATGCCCCACTaGCTCCATCTCCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTAAMPH*LHLPDQ
Trigger: CTGGTCAGGGAGATGGAGTCAGTGGGGCATTGCAGC...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR TCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATGCTGCAATGCCCCACTaGCTCCATCTCCCTGACCAG +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDAAMPH*LHLPDQ
Trigger: CTGGTCAGGGAGATGGAGTCAGTGGGGCATTGCAGC...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGCTCCTTGGGCCCGATaGCCACATTCAGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYAPWAR*PHSASS
Trigger: TGAGCTTGCTGAATGTGGGCATCGGGCCCAAGGAGC...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATCTGCTGCTGGACCCCTaGTTCACTGGCAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDLLLDP*FTGKLC
Trigger: GCAGAGCTTGCCAGTGAAGCAGGGGTCCAGCAGCAG...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTCTCAGCTCCAGTGGCTaGTGCTGGACCCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTLSSSG*CWTPAS
Trigger: TGAAGCAGGGGTCCAGCAGCAGCCACTGGAGCTGAG...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGACCGTGTGGGTCACGTaGAGCCGCTGTAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKTVWVT*SRCSSR
Trigger: CCGAGAGCTACAGCGGCTGCACGTGACCCACACGGT...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATCTCCAACGTGCAGCTTaGGCACCGTGTGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDLQRAA*APCGSR
Trigger: ACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAG...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGTTGTGGACGGAACCATaGTCTTCCACCAGGTATACC +
Preference number: 4 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMLWTEP*SSTRYT
Trigger: GGTATACCTGGTGGAAGAGCATGGTTCCGTCCACAA...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATATCCACCAGGGCTGCTaGCTTCTCCCCACTCACTCC +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDIHQGC*LLPTHS
Trigger: GGAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGAT...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGCTGGGATAAGGTCCTaGTCAGAGCAGGCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYAGIRS*SEQAPD
Trigger: ATCTGGGGCCTGCTCTGAGCAGGACCTTATCCCAGC...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCTCAAGGGGCCGTAGCTaGAGTAGAGCTGGGATAAGG +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGSRGRS*SRAGIR
Trigger: CCTTATCCCAGCTCTACTGCAGCTACGGCCCCTTGA...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCTGCGCTGCTCTAAGTaGTTGGTCAGGGGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVLRCSK*LVRGAV
Trigger: GACAGCGCCCCTGACCAACCACTTAGAGCAGCGCAG...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR CCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGTCGCCCCTGCGGGGCTaGACTGTTCTCTCCAGATGG +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKSPLRG*TVLSRW
Trigger: CCATCTGGAGAGAACAGTCCAGCCCCGCAGGGGCGA...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTTCCAGTGGCTGCTGCTaGACCCCTGCTTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTSSGCC*TPASLA
Trigger: TGCCAGTGAAGCAGGGGTCCAGCAGCAGCCACTGGA...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCACTTCTCGCACCGACTaGGCCTTATTCTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFTSRTD*ALFLMA
Trigger: AGCCATCAAGAATAAGGCCCAGTCGGTGCGAGAAGT...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGGGACAGACGGGGGCTaGGGGCTGTTTCACGGCATA +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKGTDGG*GLFHGI
Trigger: TATGCCGTGAAACAGCCCCCAGCCCCCGTCTGTCCC...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGTTGTTAAAAGGCTaGCTAGCCTGGGTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYMLLKG*LAWVGG
Trigger: TCCCCCAACCCAGGCTAGCCAGCCTTTTAACAACAT...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCGTGCAAACGTATTGGTaGGAGGGACACCCAGAAATG +
Preference number: 4 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFVQTYW*EGHPEM
Trigger: CATTTCTGGGTGTCCCTCCCACCAATACGTTTGCAC...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS-3UTR TCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTTCTCTCCAGATGGTaGGTCCGGGGCATGGTCACC +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKVLSRW*VRGMVT
Trigger: GGTGACCATGCCCCGGACTCACCATCTGGAGAGAAC...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGTTGGTTAAGAAGTGGTaGCCATTAGGATTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRLVKKW*PLGFRC
Trigger: GCACCTGAATCCTAATGGTCACCACTTCTTAACCAA...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGCAAGCTCAGGCCTTCTaGCTCGGCCAACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKQAQAF*LGQLLG
Trigger: GCCCAGAAGTTGGCCGAGTCAGAAGGCCTGAGCTTG...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGACTGGCAAGCTCTGCTaGAGCTGCTCCTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKTGKLC*SCSWHC
Trigger: GCAGTGCCAGGAGCAGCTTCAGCAGAGCTTGCCAGT...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCGGAAGCGGCCGTCGATaGTGCTGCTGCAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVGSGRR*CCCKGH
Trigger: ATGACCTTTGCAGCAGCATCATCGACGGCCGCTTCC...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGCCAGGTAGGCGGCTaGCTCCTTAATGTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTGQVGG*LLNVCC
Trigger: ACAGCAGACATTAAGGAGTCAGCCGCCTACCTGGCC...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGAGAGGTCATGGCCCCTaGTTCAGGGTTCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKRGHGP*FRVPRG
Trigger: ACCCCTGGGAACCCTGAATCAGGGGCCATGACCTCT...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000533035.5
CDS-3UTR GCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCGCTCCTTGGGCCCGATaGCCACATTCAGCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVAPWAR*PHSASS
Trigger: TGAGCTTGCTGAATGTGGGCATCGGGCCCAAGGAGC...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGCTCAGCTCCAGTGGCTaGTGCTGGACCCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKLSSSG*CWTPAS
Trigger: TGAAGCAGGGGTCCAGCAGCAGCCACTGGAGCTGAG...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGCTCCAACGTGCAGCTTaGGCACCGTGTGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKLQRAA*APCGSR
Trigger: ACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAG...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGTGTTGGTGACAGCCTaGAGCAGTGTGCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYVLVTA*SSVLSG
Trigger: TCCTGAGAGCACACTGCTGCAGGCTGTCACCAACAC...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGCTGGGATAAGGTCCTaGTCAGAGCAGGCCCCAGAT +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTAGIRS*SEQAPD
Trigger: ATCTGGGGCCTGCTCTGAGCAGGACCTTATCCCAGC...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp GGGCTGGGGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTCATGACACATATGGCTaGAAACACTTAGATTCTAAT +
Preference number: 4 (lower is better)
Translates to: GLGAVSRHKLRSRGRSCSHDTYG*KHLDSN
Trigger: ATTAGAATCTAAGTGTTTGCAGCCATATGTGTCATG...ACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCCCCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524647.5
ENST00000529742.1
CDS-3UTR CCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGCCTCCCGCTTTGGGCTaGGCAGGAACTGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKPPALG*AGTGME
Trigger: TTCCATGCCAGTTCCTGCCCAGCCCAAAGCGGGAGG...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCGGACCCCTGCTTCACTaGCAAGCTCTGCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVGPLLH*QALLKL
Trigger: CAGCTTCAGCAGAGCTTGCCAGTGAAGCAGGGGTCC...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTCTTGTTCCTTGGGGGTaGCACAGGCATCATAGGCGG +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTLVPWG*HRHHRR
Trigger: CCGCCTATGATGCCTGTGCCACCCCCAAGGAACAAG...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGACCAGATGGTATCCCTaGTTCCTGCGTATTTCACAA +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRTRWYP*FLRISQ
Trigger: TTGTGAAATACGCAGGAACCAGGGATACCATCTGGT...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCAACCACTGGACCAGATaGTATCCCTGGTTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGNHWTR*YPWFLR
Trigger: ACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTT...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTAGGGACACCCAGAAATaGGTGCCGGGGATGAGGACA +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTRDTQK*VPGMRT
Trigger: TGTCCTCATCCCCGGCACCCATTTCTGGGTGTCCCT...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS-3UTR GCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATAGCCCGTCTCCGAAGTaGTGTAGGATCTTAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYSPSPK*CRILAS
Trigger: GGAAGCTAAGATCCTACAGCACTTCGGAGACGGGCT...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATACAAAATCTCCAACGTaGAGCTTGCGCACCGTGTGG +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYTKSPT*SLRTVW
Trigger: CCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGT...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCTTGTGGACGGAACCATaGTCTTCCACCAGGTATACC +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGLWTEP*SSTRYT
Trigger: GGTATACCTGGTGGAAGAGCATGGTTCCGTCCACAA...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCGTGTTGGTGACAGCCTaGAGCAGTGTGCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVVLVTA*SSVLSG
Trigger: TCCTGAGAGCACACTGCTGCAGGCTGTCACCAACAC...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCTCAAGGGGCCGTAGCTaGAGTAGAGCTGGGATAAGG +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVSRGRS*SRAGIR
Trigger: CCTTATCCCAGCTCTACTGCAGCTACGGCCCCTTGA...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATAACGATCTTTTCCCTTaGCTCCACTCCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYNDLFP*LHSSQP
Trigger: AGGCTGGCTGGAGTGGAGCCAAGGGAAAAGATCGTT...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR CCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGGGCAGGAACTGGCATaGAAGAGTCCTGGACTTCCG +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKGQELA*KSPGLP
Trigger: CGGAAGTCCAGGACTCTTCCATGCCAGTTCCTGCCC...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCCTAGGATTGGTCTCCTaGGCCACCCACACAAAATCT +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGLGLVS*ATHTKS
Trigger: AGATTTTGTGTGGGTGGCCCAGGAGACCAATCCTAG...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATCTCCCCAGGGTTTGCTaGGTCTCTAGGATTGGTCTC +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDLPRVC*VSRIGL
Trigger: GAGACCAATCCTAGAGACCCAGCAAACCCTGGGGAG...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATGGAAGGCTGAGGTTGTaGACGGAACCATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDGRLRL*TEPCSS
Trigger: GGAAGAGCATGGTTCCGTCCACAACCTCAGCCTTCC...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCGGTTTGGAGAGGTCATaGCCCCTGATTCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVGLERS*PLIQGS
Trigger: GGAACCCTGAATCAGGGGCCATGACCTCTCCAAACC...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000533035.5
CDS-3UTR CCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCATGTTGTTAAAAGGCTaGCTAGCCTGGGTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGMLLKG*LAWVGG
Trigger: TCCCCCAACCCAGGCTAGCCAGCCTTTTAACAACAT...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACACCAGATGGTATCCCTaGTTCCTGCGTATTTCACAA +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYTRWYP*FLRISQ
Trigger: TTGTGAAATACGCAGGAACCAGGGATACCATCTGGT...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR TCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGTGCTCTCAGGAAGGCTaGGGTTGTGGACGGAACCAT +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKCSQEG*GCGRNH
Trigger: ATGGTTCCGTCCACAACCTCAGCCTTCCTGAGAGCA...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATAAGCCATCAATGACCTaGGTGTTGGTGACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDKPSMT*VLVTAC
Trigger: GCAGGCTGTCACCAACACTCAGGTCATTGATGGCTT...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCGGTCATCCAGTCGCTTaGGCTCCACAATGTGATCCA +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVGHPVA*APQCDP
Trigger: TGGATCACATTGTGGAGCGCAAGCGACTGGATGACC...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTaGGTATTTCACAAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDGIPGS*VFHKVP
Trigger: GGGGACCTTGTGAAATACGCAGGAACCAGGGATACC...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCGTGTCTCTTGTTCCTTaGGGGTGGCACAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVVSLVP*GWHRHH
Trigger: ATGATGCCTGTGCCACCCCCAAGGAACAAGAGACAC...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATATGTTGTTAAAAGGCTaGCTAGCCTGGGTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYMLLKG*LAWVGG
Trigger: TCCCCCAACCCAGGCTAGCCAGCCTTTTAACAACAT...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR TCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGAAGCCATCAATGACCTaGGTGTTGGTGACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKKPSMT*VLVTAC
Trigger: GCAGGCTGTCACCAACACTCAGGTCATTGATGGCTT...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR TCA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGAGGACCAACTGGTaGCATAAAATAGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYMRTNW*HKIDSK
Trigger: CTTGGAATCTATTTTATGTCACCAGTTGGTCCTCAT...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATTTGTGGACGGAACCATaGTCTTCCACCAGGTATACC +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDLWTEP*SSTRYT
Trigger: GGTATACCTGGTGGAAGAGCATGGTTCCGTCCACAA...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCATTCTTGATGGCTCCTaGGTTGAAGTCACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGILDGS*VEVTGR
Trigger: TCTACCAGTGACTTCAACGCAGGAGCCATCAAGAAT...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCTAGGATTGGTCTCCTaGGCCACCCACACAAAATCT +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVLGLVS*ATHTKS
Trigger: AGATTTTGTGTGGGTGGCCCAGGAGACCAATCCTAG...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATACTTCTCGCACCGACTaGGCCTTATTCTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDTSRTD*ALFLMA
Trigger: AGCCATCAAGAATAAGGCCCAGTCGGTGCGAGAAGT...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTACTTCTCGCACCGACTaGGCCTTATTCTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTTSRTD*ALFLMA
Trigger: AGCCATCAAGAATAAGGCCCAGTCGGTGCGAGAAGT...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTGTCTCTTGTTCCTTaGGGGTGGCACAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKVSLVP*GWHRHH
Trigger: ATGATGCCTGTGCCACCCCCAAGGAACAAGAGACAC...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATAAGCTTGAAGGAGGCTaGAGATGGAGACTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDKLEGG*RWRLVL
Trigger: CAAGACCAGTCTCCATCTCCAGCCTCCTTCAAGCTT...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS-3UTR GCA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGCATGACACATATGGCTaGAAACACTTAGATTCTAAT +
Preference number: 4 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRHDTYG*KHLDSN
Trigger: ATTAGAATCTAAGTGTTTGCAGCCATATGTGTCATG...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR TCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATTTGGTTAAGAAGTGGTaGCCATTAGGATTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDLVKKW*PLGFRC
Trigger: GCACCTGAATCCTAATGGTCACCACTTCTTAACCAA...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR GCA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCATTCTTGATGGCTCCTaGGTTGAAGTCACTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVILDGS*VEVTEG
Trigger: ACCTTCAGTGACTTCAACGCAGGAGCCATCAAGAAT...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000533035.5
CDS-3UTR GCA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTATTCTTGATGGCTCCTaGGTTGAAGTCACTGAAGGT +
Preference number: 4 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTILDGS*VEVTEG
Trigger: ACCTTCAGTGACTTCAACGCAGGAGCCATCAAGAAT...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000533035.5
CDS-3UTR TCA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATATGAGGACCAACTGGTaGCATAAAATAGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYMRTNW*HKIDSK
Trigger: CTTGGAATCTATTTTATGTCACCAGTTGGTCCTCAT...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGACCAGATGGTATCCCTaGTTCCTGCGTATTTCACAA +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKTRWYP*FLRISQ
Trigger: TTGTGAAATACGCAGGAACCAGGGATACCATCTGGT...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR TCA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGATGAGGACCAACTGGTaGCATAAAATAGATTCCAAG +
Preference number: 4 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKMRTNW*HKIDSK
Trigger: CTTGGAATCTATTTTATGTCACCAGTTGGTCCTCAT...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR GCA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATCATGACACATATGGCTaGAAACACTTAGATTCTAAT +
Preference number: 4 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDHDTYG*KHLDSN
Trigger: ATTAGAATCTAAGTGTTTGCAGCCATATGTGTCATG...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS GCA 90 bp GCCGTGCATCGGGCGAGGGCTGGAACGGCGCTGTCTGTCGGCGCGTaGGCGCACGCTCAGGCCCGGCCGCCGGTGCCGAAGCCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: AVHRARAGTALSVGA*AHAQARPPVPKPWA
Trigger: GGCCCAGGGCTTCGGCACCGGCGGCCGGGCCTGAGCGTGCGCGCACGCGCCGACAGACAGCGCCGTTCCAGCCCTCGCCCGATGCACGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529857.5
CDS CCA 90 bp GTCCTCCGGCGCTCCACGCCCGCGGGACTGGGACGCCGCCAGTTCTaGAGTCGGGATTCGAACACCTGGCCCAGGGCGGGGCGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: VLRRSTPAGLGRRQF*SRDSNTWPRAGRGK
Trigger: CTTCCCCCGCCCCGCCCTGGGCCAGGTGTTCGAATCCCGACTCCAGAACTGGCGGCGTCCCAGTCCCGCGGGCGTGGAGCGCCGGAGGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000525768.5
CDS CCA 90 bp TCGCCTCGTCCCGCCACTCGGTCAGCCAGCGAACGAAGAGCGGGTTaGGACAGGCAGGCAGCGGGCGCTTCCGGCCCAGGCGGACCGGGG +
Preference number: 5 (lower is better)
Translates to: SPRPATRSASERRAG*DRQAAGASGPGGPG
Trigger: CCCCGGTCCGCCTGGGCCGGAAGCGCCCGCTGCCTGCCTGTCCCAACCCGCTCTTCGTTCGCTGGCTGACCGAGTGGCGGGACGAGGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000525768.5
ENST00000529857.5
CDS GCA 90 bp TGGGTCACGTGCAGCCGCTGTAGCTCTCGGAGCAGCTCCGGCCTGTaGCCGCCCCTGGAGTGGCAAGGAGGGAAGCCCCCGGGTCTCGCC +
Preference number: 5 (lower is better)
Translates to: WVTCSRCSSRSSSGL*PPLEWQGGKPPGLA
Trigger: GGCGAGACCCGGGGGCTTCCCTCCTTGCCACTCCAGGGGCGGGCACAGGCCGGAGCTGCTCCGAGAGCTACAGCGGCTGCACGTGACCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530111.1
CDS CCA 90 bp GCGGGACTGGGACGCCGCCAGTTCTGGAGTCGGGATTCGAACACCTaGCCCAGGGCGGGGCGGGGGAAGAGGGAGACCGAGGGCAGGACC +
Preference number: 5 (lower is better)
Translates to: AGLGRRQFWSRDSNT*PRAGRGKRETEGRT
Trigger: GGTCCTGCCCTCGGTCTCCCTCTTCCCCCGCCCCGCCCTGGGCCAGGTGTTCGAATCCCGACTCCAGAACTGGCGGCGTCCCAGTCCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000525768.5
CDS CCA 90 bp CATGAGCCCGAGGGCGGGTCCTCCGGCGCTCCACGCCCGCGGGACTaGGACGCCGCCAGTTCTGGAGTCGGGATTCGAACACCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: HEPEGGSSGAPRPRD*DAASSGVGIRTPGP
Trigger: TGGGCCAGGTGTTCGAATCCCGACTCCAGAACTGGCGGCGTCCCAGTCCCGCGGGCGTGGAGCGCCGGAGGACCCGCCCTCGGGCTCATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000525768.5
CDS GCA 90 bp CCCATCGGGCCACGCCAGGACCCACCTTCTGAAATACGAAGCGCGTaGGGCGCCTGCTGCGGGTCGCCTCGTCCCGCCACTCGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: PIGPRQDPPSEIRSA*GACCGSPRPATRSA
Trigger: GGCTGACCGAGTGGCGGGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGTGGGTCCTGGCGTGGCCCGATGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525768.5
CDS CCA 90 bp CATGAGCCCGAGGGCGGGTCCTCCGGCGCTCCACGCCCGCGGGACTaGGACGCCGCCAGTTCTGGAGTCGGGATTCGAACACCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: HEPEGGSSGAPRPRD*DAASSGVGIRTPEL
Trigger: AAGCTCAGGTGTTCGAATCCCGACTCCAGAACTGGCGGCGTCCCAGTCCCGCGGGCGTGGAGCGCCGGAGGACCCGCCCTCGGGCTCATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529857.5
CDS GCA 90 bp GGAGGGAACGCAGCGCCTTCTGAAATACGAAGCGCGTGCGGCGCCTaGTGCGGGTCGCCTCGTCCCGCCACTCGGTCAGCCAGCGAACGA +
Preference number: 5 (lower is better)
Translates to: GGNAAPSEIRSACGA*CGSPRPATRSASER
Trigger: TCGTTCGCTGGCTGACCGAGTGGCGGGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGCGCTGCGTTCCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000529857.5
CDS GCA 90 bp CCACGCCAGGACCCACCTTCTGAAATACGAAGCGCGTGCGGCGCCTaGTGCGGGTCGCCTCGTCCCGCCACTCGGTCAGCCAGCGAACGA +
Preference number: 5 (lower is better)
Translates to: PRQDPPSEIRSACGA*CGSPRPATRSASER
Trigger: TCGTTCGCTGGCTGACCGAGTGGCGGGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGTGGGTCCTGGCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525768.5
CDS CCA 90 bp CCTGGCCGGGCAGGGGTAGGGTACCTGGTCAGGGCAGGCCTGACCTaGCCAGCAGCTTTTCCCATCGGGCCACGCCAGGACCCACCTTCT +
Preference number: 5 (lower is better)
Translates to: PGRAGVGYLVRAGLT*PAAFPIGPRQDPPS
Trigger: AGAAGGTGGGTCCTGGCGTGGCCCGATGGGAAAAGCTGCTGGCCAGGTCAGGCCTGCCCTGACCAGGTACCCTACCCCTGCCCGGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525768.5
CDS TCA 90 bp CTGGCCAGCAGCTTTTCCCATCGGGCCACGCCAGGACCCACCTTCTaGAATACGAAGCGCGTGCGGCGCCTGCTGCGGGTCGCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: LASSFSHRATPGPTF*NTKRVRRLLRVASS
Trigger: GGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGTGGGTCCTGGCGTGGCCCGATGGGAAAAGCTGCTGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525768.5
CDS GCA 90 bp GGGAACGCAGCGCCTTCTGAAATACGAAGCGCGTGCGGCGCCTGCTaGGGGTCGCCTCGTCCCGCCACTCGGTCAGCCAGCGAACGAAGA +
Preference number: 5 (lower is better)
Translates to: GNAAPSEIRSACGAC*GSPRPATRSASERR
Trigger: TCTTCGTTCGCTGGCTGACCGAGTGGCGGGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGCGCTGCGTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000529857.5
CDS GCA 90 bp CGCCAGGACCCACCTTCTGAAATACGAAGCGCGTGCGGCGCCTGCTaGGGGTCGCCTCGTCCCGCCACTCGGTCAGCCAGCGAACGAAGA +
Preference number: 5 (lower is better)
Translates to: RQDPPSEIRSACGAC*GSPRPATRSASERR
Trigger: TCTTCGTTCGCTGGCTGACCGAGTGGCGGGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGTGGGTCCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525768.5
CDS CCA 90 bp CCGCGCACCTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTaGGCCTGGGTTCGGGAAAGGGCTGGATCAGTGGGGGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PRTCISCRANTSRTD*AWVRERAGSVGVWA
Trigger: GGCCCAGACCCCCACTGATCCAGCCCTTTCCCGAACCCAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529786.1
ENST00000531905.1
ENST00000533519.1
CDS GCA 90 bp CGCTGCAGCCGCTCGTCCAGCATCCGGCAGAGCCCGTCTCCGAAGTaGTGTAGGATCTTAGCTTCCTTCCCGCTGCGCAGCGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: RCSRSSSIRQSPSPK*CRILASFPLRSGSG
Trigger: CCCACTGCCGCTGCGCAGCGGGAAGGAAGCTAAGATCCTACAGCACTTCGGAGACGGGCTCTGCCGGATGCTGGACGAGCGGCTGCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525768.5
ENST00000529857.5
ENST00000533035.5
CDS GCA 90 bp CGATCCACCAGGGCTGCTGCCTTCTCCCCACTCACTCCGCGCACCTaGATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RSTRAAAFSPLTPRT*ISCRANTSRTDWAW
Trigger: CCAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529786.1
ENST00000531905.1
ENST00000533519.1
CDS GCA 90 bp TGGGTCACGTGCAGCCGCTGTAGCTCTCGGAGCAGCTCCGGCCTGTaGCCGCCCCTGGAGTGGCAAGGAGGGAAGCCTAGATCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: WVTCSRCSSRSSSGL*PPLEWQGGKPRSEQ
Trigger: CTGCTCTGATCTAGGCTTCCCTCCTTGCCACTCCAGGGGCGGGCACAGGCCGGAGCTGCTCCGAGAGCTACAGCGGCTGCACGTGACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 90 bp GTGTGTCCTGAGGACCAGGTTCCTGTGAAGGAGGGAGCGGAGGGCTaGCCAGGGTCGAGCACTCCCAGGGGCTACCCTGGGGGACTTCTG +
Preference number: 5 (lower is better)
Translates to: VCPEDQVPVKEGAEG*PGSSTPRGYPGGLL
Trigger: CAGAAGTCCCCCAGGGTAGCCCCTGGGAGTGCTCGACCCTGGCCAGCCCTCCGCTCCCTCCTTCACAGGAACCTGGTCCTCAGGACACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525768.5
ENST00000529374.5
ENST00000530111.1
ENST00000531905.1
ENST00000533035.5
ENST00000533555.5
CDS GCA 90 bp CACACAAAATCTCCAACGTGCAGCTTGCGCACCGTGTGGGTCACGTaGAGCCGCTGTAGCTCTCGGAGCAGCTCCGGCCTGTGCCCGCCC +
Preference number: 5 (lower is better)
Translates to: HTKSPTCSLRTVWVT*SRCSSRSSSGLCPP
Trigger: GGGCGGGCACAGGCCGGAGCTGCTCCGAGAGCTACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS GCA 90 bp AGGGCTGCTGCCTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTaGCGGGCAAACACTTCTCGCACCGACTGGGCCTGGGTTCGGGAA +
Preference number: 5 (lower is better)
Translates to: RAAAFSPLTPRTCIS*RANTSRTDWAWVRE
Trigger: TTCCCGAACCCAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529786.1
ENST00000531905.1
ENST00000533519.1
CDS GCA 90 bp CAGCCGTTAGCTTGCGATCCCCTACCCACCAGGCCCTGCCCCTGGTaGCAGCCTGTCCACGGCCCTTCACCTGGGTCTCTAGGATTGGTC +
Preference number: 5 (lower is better)
Translates to: QPLACDPLPTRPCPW*QPVHGPSPGSLGLV
Trigger: GACCAATCCTAGAGACCCAGGTGAAGGGCCGTGGACAGGCTGGCACCAGGGGCAGGGCCTGGTGGGTAGGGGATCGCAAGCTAACGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525147.5
ENST00000531905.1
CDS GCA 90 bp CTGACAAGCCAGCCGTTAGCTTGCGATCCCCTACCCACCAGGCCCTaGCCCTGGTGCCAGCCTGTCCACGGCCCTTCACCTGGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: LTSQPLACDPLPTRP*PWCQPVHGPSPGSL
Trigger: TAGAGACCCAGGTGAAGGGCCGTGGACAGGCTGGCACCAGGGGCAGGGCCTGGTGGGTAGGGGATCGCAAGCTAACGGCTGGCTTGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525147.5
ENST00000531905.1
CDS CCA 90 bp ACCTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTaGGTTCGGGAAAGGGCTGGATCAGTGGGGGTCTGGGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: TCISCRANTSRTDWA*VRERAGSVGVWARP
Trigger: TGGCCTGGCCCAGACCCCCACTGATCCAGCCCTTTCCCGAACCCAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529786.1
ENST00000531905.1
ENST00000533519.1
CDS CCA 90 bp GGAGGGCAGGGGCTGAGGACACCTAAGGGCCCTTTAGGGCCTACCTaGCAGGGGTGCTGTATCGATCCACCAGGGCTGCTGCCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: GGQGLRTPKGPLGPT*QGCCIDPPGLLPSP
Trigger: GGGAGAAGGCAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGGTAGGCCCTAAAGGGCCCTTAGGTGTCCTCAGCCCCTGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS TCA 90 bp GGGCTCCTTGGGCCCGATGCCCACATTCAGCAAGCTCAGGCCTTCTaGCTCGGCCAACTTCTGGGCCAGCTCCAGGCCCTCTGGGGTCAA +
Preference number: 5 (lower is better)
Translates to: GLLGPDAHIQQAQAF*LGQLLGQLQALWGQ
Trigger: TTGACCCCAGAGGGCCTGGAGCTGGCCCAGAAGTTGGCCGAGTCAGAAGGCCTGAGCTTGCTGAATGTGGGCATCGGGCCCAAGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530111.1
ENST00000531905.1
ENST00000533035.5
ENST00000533555.5
CDS GCA 90 bp CCAGCAGTATCACTCGGGCTCCTGAGTGCCGAGCTGGCCAGTAGCTaGCAGAGCCTCCCGCTTTGGGCTGGGCAGGAACTGGCATGGAAG +
Preference number: 5 (lower is better)
Translates to: PAVSLGLLSAELASS*QSLPLWAGQELAWK
Trigger: CTTCCATGCCAGTTCCTGCCCAGCCCAAAGCGGGAGGCTCTGGCAGCTACTGGCCAGCTCGGCACTCAGGAGCCCGAGTGATACTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525768.5
ENST00000529374.5
ENST00000530111.1
ENST00000533035.5
ENST00000533555.5
CDS CCA 90 bp CTGAAGCTGCTCCTGGCACTGCTGTCTCCTCCCCAGGGGGCTCCTTaGGCCCGATGCCCACATTCAGCAAGCTCAGGCCTTCTGACTCGG +
Preference number: 5 (lower is better)
Translates to: LKLLLALLSPPQGAP*ARCPHSASSGLLTR
Trigger: CCGAGTCAGAAGGCCTGAGCTTGCTGAATGTGGGCATCGGGCCCAAGGAGCCCCCTGGGGAGGAGACAGCAGTGCCAGGAGCAGCTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530111.1
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
ENST00000533555.5
CDS CCA 90 bp TGGGCCACCCACACAAAATCTCCAACGTGCAGCTTGCGCACCGTGTaGGTCACGTGCAGCCGCTGTAGCTCTCGGAGCAGCTCCGGCCTG +
Preference number: 5 (lower is better)
Translates to: WATHTKSPTCSLRTV*VTCSRCSSRSSSGL
Trigger: CAGGCCGGAGCTGCTCCGAGAGCTACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS CCA 90 bp GACGTCTCCCTCCCTCCTGTGGCCTCCACTACCTGGGACACTATGTaGGCCTGCTGGCTTCCTCCCCACTTGACCTCCACGAGCACCCTG +
Preference number: 5 (lower is better)
Translates to: DVSLPPVASTTWDTM*ACWLPPHLTSTSTL
Trigger: CAGGGTGCTCGTGGAGGTCAAGTGGGGAGGAAGCCAGCAGGCCCACATAGTGTCCCAGGTAGTGGAGGCCACAGGAGGGAGGGAGACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS CCA 90 bp GCCTGTGGGGGTCTGATCCTGGAGCAGCCACAGGGTGGGTGTGGCTaGATTCCAAAGGGCTCTGCCTCAAGGAGGCTGCCAGAAGTGCCC +
Preference number: 5 (lower is better)
Translates to: ACGGLILEQPQGGCG*IPKGSASRRLPEVP
Trigger: GGGCACTTCTGGCAGCCTCCTTGAGGCAGAGCCCTTTGGAATCCAGCCACACCCACCCTGTGGCTGCTCCAGGATCAGACCCCCACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS CCA 90 bp GCTTCAGCCGGAACTGGCTTCCTACTGTGCGCCTGGATGGGCCTGTaGGGGTCTGATCCTGGAGCAGCCACAGGGTGGGTGTGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: ASAGTGFLLCAWMGL*GSDPGAATGWVWLD
Trigger: ATCCAGCCACACCCACCCTGTGGCTGCTCCAGGATCAGACCCCCACAGGCCCATCCAGGCGCACAGTAGGAAGCCAGTTCCGGCTGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530928.5
CDS CCA 90 bp ACCACAGCGCTTCAGCCGGAACTGGCTTCCTACTGTGCGCCTGGATaGGCCTGTGGGGGTCTGATCCTGGAGCAGCCACAGGGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: TTALQPELASYCAPG*ACGGLILEQPQGGC
Trigger: ACACCCACCCTGTGGCTGCTCCAGGATCAGACCCCCACAGGCCCATCCAGGCGCACAGTAGGAAGCCAGTTCCGGCTGAAGCGCTGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530928.5
CDS TCA 90 bp ATTCAGGTGCTCCCGGTAGAGCACCAGCAGTATCACTCGGGCTCCTaGGTGCCGAGCTGGCCAGTAGCTGCCAGAGCCTCCCGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: IQVLPVEHQQYHSGS*VPSWPVAARASRFG
Trigger: CCCAAAGCGGGAGGCTCTGGCAGCTACTGGCCAGCTCGGCACTCAGGAGCCCGAGTGATACTGCTGGTGCTCTACCGGGAGCACCTGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525768.5
ENST00000529374.5
ENST00000530111.1
ENST00000531905.1
ENST00000533035.5
ENST00000533555.5
CDS TCA 90 bp GCTAGTGGATCTGTTAGGTGGGAGGGGGCCAGGGGCGGCTCACAGTaGGCTGCTCACAGTGACTGGCAGCCGCATGCATGGGTCTCAGCA +
Preference number: 5 (lower is better)
Translates to: ASGSVRWEGARGGSQ*AAHSDWQPHAWVSA
Trigger: TGCTGAGACCCATGCATGCGGCTGCCAGTCACTGTGAGCAGCTCACTGTGAGCCGCCCCTGGCCCCCTCCCACCTAACAGATCCACTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525006.1
CDS TCA 90 bp CTGCCTCAAGGAGGCTGCCAGAAGTGCCCCTGGATTGCTCTGGGCTaGAAACGGGGCTTCGGAGCAGGCAGGGAAGCCTGGCAAAGCCAG +
Preference number: 5 (lower is better)
Translates to: LPQGGCQKCPWIALG*KRGFGAGREAWQSQ
Trigger: CTGGCTTTGCCAGGCTTCCCTGCCTGCTCCGAAGCCCCGTTTTCAGCCCAGAGCAATCCAGGGGCACTTCTGGCAGCCTCCTTGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS GCA 90 bp GGGCTGAGGACACCTAAGGGCCCTTTAGGGCCTACCTGGCAGGGGTaGTGTATCGATCCACCAGGGCTGCTGCCTTCTCCCCACTCACTC +
Preference number: 5 (lower is better)
Translates to: GLRTPKGPLGPTWQG*CIDPPGLLPSPHSL
Trigger: GAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGGTAGGCCCTAAAGGGCCCTTAGGTGTCCTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS GCA 90 bp CCAGCAGTATCACTCGGGCTCCTGAGTGCCGAGCTGGCCAGTAGCTaGCAGAGCCTCCCGCTTTGGGCTGGGCAGGAACCTGAAAGGTAC +
Preference number: 5 (lower is better)
Translates to: PAVSLGLLSAELASS*QSLPLWAGQEPERY
Trigger: GTACCTTTCAGGTTCCTGCCCAGCCCAAAGCGGGAGGCTCTGGCAGCTACTGGCCAGCTCGGCACTCAGGAGCCCGAGTGATACTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS GCA 90 bp CCTGGAGCAGCCACAGGGTGGGTGTGGCTGGATTCCAAAGGGCTCTaGCTCAAGGAGGCTGCCAGAAGTGCCCCTGGATTGCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PGAATGWVWLDSKGL*LKEAARSAPGLLWA
Trigger: AGCCCAGAGCAATCCAGGGGCACTTCTGGCAGCCTCCTTGAGGCAGAGCCCTTTGGAATCCAGCCACACCCACCCTGTGGCTGCTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS CCA 90 bp CTCCCTCCTGTGGCCTCCACTACCTGGGACACTATGTGGGCCTGCTaGCTTCCTCCCCACTTGACCTCCACGAGCACCCTGGGATCTGTC +
Preference number: 5 (lower is better)
Translates to: LPPVASTTWDTMWAC*LPPHLTSTSTLGSV
Trigger: GACAGATCCCAGGGTGCTCGTGGAGGTCAAGTGGGGAGGAAGCCAGCAGGCCCACATAGTGTCCCAGGTAGTGGAGGCCACAGGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS-3UTR CAA 90 bp GCACCTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTTCCCCAGGGGGCTCCTaGGGCCCGATGCCCACATTC +
Preference number: 5 (lower is better)
Translates to: APASAAGQTLLAPTGPYSSPGGS*GPMPTF
Trigger: GAATGTGGGCATCGGGCCCAAGGAGCCCCCTGGGGA...AGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS GCA 90 bp CACACTCAAAATGGTGCCGGGACCCTGTTCCCACCAGTTAGCCTCTaGATCCTCCCTAGCCTCTCCACCTGCCTCACAGGGGCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: HTQNGAGTLFPPVSL*ILPSLSTCLTGASA
Trigger: TGCGGAGGCCCCTGTGAGGCAGGTGGAGAGGCTAGGGAGGATGCAGAGGCTAACTGGTGGGAACAGGGTCCCGGCACCATTTTGAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS GCA 90 bp GTGAATTCCTTGTGGGCTCTGTCCCGACACTGGGAAAGGGGCCTCTaGTCACCTGGTAGAGTCTCTGCAGGCCCCGCGTCAAGAGGGCCA +
Preference number: 5 (lower is better)
Translates to: VNSLWALSRHWERGL*SPGRVSAGPASRGP
Trigger: TGGCCCTCTTGACGCGGGGCCTGCAGAGACTCTACCAGGTGAGCAGAGGCCCCTTTCCCAGTGTCGGGACAGAGCCCACAAGGAATTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS CCA 90 bp AGAATGCAGGTACCTGGCTTCCTACTGTGCGCCTGGATGGGCCTGTaGGGGTCTGATCCTGGAGCAGCCACAGGGTGGGTGTGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: RMQVPGFLLCAWMGL*GSDPGAATGWVWLD
Trigger: ATCCAGCCACACCCACCCTGTGGCTGCTCCAGGATCAGACCCCCACAGGCCCATCCAGGCGCACAGTAGGAAGCCAGGTACCTGCATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 90 bp TCAGCCCAAGAATGCAGGTACCTGGCTTCCTACTGTGCGCCTGGATaGGCCTGTGGGGGTCTGATCCTGGAGCAGCCACAGGGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: SAQECRYLASYCAPG*ACGGLILEQPQGGC
Trigger: ACACCCACCCTGTGGCTGCTCCAGGATCAGACCCCCACAGGCCCATCCAGGCGCACAGTAGGAAGCCAGGTACCTGCATTCTTGGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS-3UTR CAA 90 bp CCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCCAGAGCCTCCCGCTTaGGGCTGGGCAGGAACTGGC +
Preference number: 5 (lower is better)
Translates to: PLDQMVSLVPAYFTRSPGPEPPA*GWAGTG
Trigger: GCCAGTTCCTGCCCAGCCCAAAGCGGGAGGCTCTGG...CCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS TCA 90 bp GTAGAGTCTCTGCAGGCCCCGCGTCAAGAGGGCCAGGTAGGCGGCTaGCTCCTTAATGTCTGCTGTGCGCTGAGTGTTGGTGACAGCCTG +
Preference number: 5 (lower is better)
Translates to: VESLQAPRQEGQVGG*LLNVCCALSVGDSL
Trigger: CAGGCTGTCACCAACACTCAGCGCACAGCAGACATTAAGGAGTCAGCCGCCTACCTGGCCCTCTTGACGCGGGGCCTGCAGAGACTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525224.5
CDS GCA 90 bp GATTGGTCTCCTGGGCCACCCACACAAAATCTCCAACGTGCAGCTTaGGCACCGTGTGGGTCACGTGCAGCCGCTGTAGCTCTCGGAGCA +
Preference number: 5 (lower is better)
Translates to: DWSPGPPTQNLQRAA*APCGSRAAAVALGA
Trigger: TGCTCCGAGAGCTACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCAGGAGACCAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS CCA 90 bp CAGCCTGTCCACGGCCCTTCACCTGGGTCTCTAGGATTGGTCTCCTaGGCCACCCACACAAAATCTCCAACGTGCAGCTTGCGCACCGTG +
Preference number: 5 (lower is better)
Translates to: QPVHGPSPGSLGLVS*ATHTKSPTCSLRTV
Trigger: CACGGTGCGCAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCAGGAGACCAATCCTAGAGACCCAGGTGAAGGGCCGTGGACAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525147.5
ENST00000531905.1
CDS CCA 90 bp GTCCAGGAGAGGCGGGGGCTAGGAGACAAACGGGTGCAAACGTATTaGTGGGAGGGACACCCAGAAATGGGTGCCGGGGATGAGGACACA +
Preference number: 5 (lower is better)
Translates to: VQERRGLGDKRVQTY*WEGHPEMGAGDEDT
Trigger: TGTGTCCTCATCCCCGGCACCCATTTCTGGGTGTCCCTCCCACCAATACGTTTGCACCCGTTTGTCTCCTAGCCCCCGCCTCTCCTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS-3UTR CAA 90 bp GGGCTGTTTCACGGCATAAGCTCAGGTCAAGGGGCCGTAGCTGCAGTAGAGCTGGCTGGGTCTCTAGGATaGGTCTCCTGGGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: GLFHGISSGQGAVAAVELAGSLG*VSWATH
Trigger: GTGGGTGGCCCAGGAGACCAATCCTAGAGACCCAGC...CAGCTCTACTGCAGCTACGGCCCCTTGACCTGAGCTTATGCCGTGAAACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS TCA 90 bp CACAGCGCTTCAGCCGGAACTTCTGCTCCCGGAAGCGGCCGTCGATaGTGCTGCTGCAAAGGTCATCCAGTCGCTTGCGCTCCACAATGT +
Preference number: 5 (lower is better)
Translates to: HSASAGTSAPGSGRR*CCCKGHPVACAPQC
Trigger: ACATTGTGGAGCGCAAGCGACTGGATGACCTTTGCAGCAGCATCATCGACGGCCGCTTCCGGGAGCAGAAGTTCCGGCTGAAGCGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525147.5
ENST00000525224.5
ENST00000529374.5
ENST00000533035.5
CDS GCA 90 bp TGCAGCAGTGTGCTCTCAGGAAGGCTGAGGTTGTGGACGGAACCATaGTCTTCCACCAGGTATACCCGGCGCTCCAGACCACAGCGCTTC +
Preference number: 5 (lower is better)
Translates to: CSSVLSGRLRLWTEP*SSTRYTRRSRPQRF
Trigger: GAAGCGCTGTGGTCTGGAGCGCCGGGTATACCTGGTGGAAGAGCATGGTTCCGTCCACAACCTCAGCCTTCCTGAGAGCACACTGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525147.5
ENST00000525224.5
ENST00000529374.5
ENST00000529786.1
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS GCA 90 bp CCACTTGACCTCCACGAGCACCCTGGGATCTGTCTATCTCTGGTCTaGAGAGCCCACACAAGGCCAGGCCCCCTCCACGAAGCATGGATT +
Preference number: 5 (lower is better)
Translates to: PLDLHEHPGICLSLV*RAHTRPGPLHEAWI
Trigger: AATCCATGCTTCGTGGAGGGGGCCTGGCCTTGTGTGGGCTCTGCAGACCAGAGATAGACAGATCCCAGGGTGCTCGTGGAGGTCAAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS CCA 90 bp CTCCTGAGTGCCGAGCTGGCCAGTAGCTGCCAGAGCCTCCCGCTTTaGGCTGGGCAGGAACCTGAAAGGTACAGAGGAGTTCTGAACATG +
Preference number: 5 (lower is better)
Translates to: LLSAELASSCQSLPL*AGQEPERYRGVLNM
Trigger: CATGTTCAGAACTCCTCTGTACCTTTCAGGTTCCTGCCCAGCCCAAAGCGGGAGGCTCTGGCAGCTACTGGCCAGCTCGGCACTCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 90 bp CTCCAGACCACAGCGCTTCAGCCGGAACTAGGGAAGTGTACAGAGTaGACAGGGAGGGTCAGGCTGGATGACCACATGCCTGGGCATCCA +
Preference number: 5 (lower is better)
Translates to: LQTTALQPELGKCTE*TGRVRLDDHMPGHP
Trigger: TGGATGCCCAGGCATGTGGTCATCCAGCCTGACCCTCCCTGTCCACTCTGTACACTTCCCTAGTTCCGGCTGAAGCGCTGTGGTCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 90 bp CAGGAGAGGCGGGGGCTAGGAGACAAACGGGTGCAAACGTATTGGTaGGAGGGACACCCAGAAATGGGTGCCGGGGATGAGGACACAAAG +
Preference number: 5 (lower is better)
Translates to: QERRGLGDKRVQTYW*EGHPEMGAGDEDTK
Trigger: CTTTGTGTCCTCATCCCCGGCACCCATTTCTGGGTGTCCCTCCCACCAATACGTTTGCACCCGTTTGTCTCCTAGCCCCCGCCTCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS-3UTR CAA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGCCGAGGGCAGGACCGTaGAGATCACGGGGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRPRAGP*RSRGPK
Trigger: TTTGGGGCCCCGTGATCTCAACGGTCCTGCCCTCGG...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR CAA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTCCCCAGGGGGCTCCTaGGGCCCGATGCCCACATTC +
Preference number: 5 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFSPGGS*GPMPTF
Trigger: GAATGTGGGCATCGGGCCCAAGGAGCCCCCTGGGGA...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CAA 90 bp CATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTTGATGGCTCTCCAACGTGCAGCTaGCGCACCGTGTGGGTCACG +
Preference number: 5 (lower is better)
Translates to: HQLPGKHFSHRLGLILDGSPTCS*RTVWVT
Trigger: CGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGA...GCCATCAAGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CAA 90 bp CTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTGCCGGGCAAACACTTCTCGTCAGGAAGGCTGAGGTaGTGGACGGAACCATGCTCT +
Preference number: 5 (lower is better)
Translates to: LLPTHSAHLHQLPGKHFSSGRLR*WTEPCS
Trigger: AGAGCATGGTTCCGTCCACAACCTCAGCCTTCCTGA...CGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS GCA 90 bp TCTCTAGGATTGGTCTCCTGGGCCACCCACACAAAATCTCCAACGTaGAGCTTGCGCACCGTGTGGGTCACGTGCAGCCGCTGTAGCTCT +
Preference number: 5 (lower is better)
Translates to: SLGLVSWATHTKSPT*SLRTVWVTCSRCSS
Trigger: AGAGCTACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCAGGAGACCAATCCTAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS GCA 90 bp TCGGAGCAGGCAGGGAAGCCTGGCAAAGCCAGCAAAATTACCTTCTaGTCCCGGAAGCGGCCGTCGATGATGCTGCTGCAAAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: SEQAGKPGKASKITF*SRKRPSMMLLQRSS
Trigger: GGATGACCTTTGCAGCAGCATCATCGACGGCCGCTTCCGGGAGCAGAAGGTAATTTTGCTGGCTTTGCCAGGCTTCCCTGCCTGCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS CCA 90 bp TCTAAGTGGTTGGTCAGGGGCGCTGTCTCTAACGATCTTTTCCCTTaGCTCCACTCCAGCCAGCCTTTGAGACGCGCCCTTTCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: SKWLVRGAVSNDLFP*LHSSQPLRRALSQP
Trigger: GGGCTGGGAAAGGGCGCGTCTCAAAGGCTGGCTGGAGTGGAGCCAAGGGAAAAGATCGTTAGAGACAGCGCCCCTGACCAACCACTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS CCA 90 bp TTGGTGACAGCCTGCAGCAGTGTGCTCTCAGGAAGGCTGAGGTTGTaGACGGAACCATGCTCTTCCACCAGGTATACCCGGCGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LVTACSSVLSGRLRL*TEPCSSTRYTRRSR
Trigger: TCTGGAGCGCCGGGTATACCTGGTGGAAGAGCATGGTTCCGTCCACAACCTCAGCCTTCCTGAGAGCACACTGCTGCAGGCTGTCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525147.5
ENST00000525224.5
ENST00000529374.5
ENST00000529786.1
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS CCA 90 bp CACCAGTCCCAAGAGCCACATGTGGCCTTGAATCGTCAGTTAGCCTaGGTCAGACAGAGCAGGCTGGAGAGGGTGAGAAGAGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: HQSQEPHVALNRQLA*VRQSRLERVRRAPA
Trigger: TGCTGGGGCTCTTCTCACCCTCTCCAGCCTGCTCTGTCTGACCCAGGCTAACTGACGATTCAAGGCCACATGTGGCTCTTGGGACTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525006.1
CDS-3UTR CAA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGTCTCCAACGTGCAGCTaGCGCACCGTGTGGGTCACG +
Preference number: 5 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRSPTCS*RTVWVT
Trigger: CGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGA...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS TCA 90 bp TGGACAGGGAGGGTCAGGCTGGATGACCACATGCCTGGGCATCCATaGTGTCACACTCAAAATGGTGCCGGGACCCTGTTCCCACCAGTT +
Preference number: 5 (lower is better)
Translates to: WTGRVRLDDHMPGHP*CHTQNGAGTLFPPV
Trigger: AACTGGTGGGAACAGGGTCCCGGCACCATTTTGAGTGTGACATCATGGATGCCCAGGCATGTGGTCATCCAGCCTGACCCTCCCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS GCA 90 bp CCTGTATACGGCCCGAGGGCTGAGAAAACCGAAGGTTATGTAGCTTaGCCAGGCTCCTGCCTGCAGGAGATGGGTCTGATACACCCGTTG +
Preference number: 5 (lower is better)
Translates to: PVYGPRAEKTEGYVA*PGSCLQEMGLIHPL
Trigger: CAACGGGTGTATCAGACCCATCTCCTGCAGGCAGGAGCCTGGGCAAGCTACATAACCTTCGGTTTTCTCAGCCCTCGGGCCGTATACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529857.5
CDS GCA 90 bp GGAAGTGTACAGAGTGGACAGGGAGGGTCAGGCTGGATGACCACATaGCTGGGCATCCATGATGTCACACTCAAAATGGTGCCGGGACCC +
Preference number: 5 (lower is better)
Translates to: GSVQSGQGGSGWMTT*LGIHDVTLKMVPGP
Trigger: GGGTCCCGGCACCATTTTGAGTGTGACATCATGGATGCCCAGGCATGTGGTCATCCAGCCTGACCCTCCCTGTCCACTCTGTACACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS-3UTR CAA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCCACTCCAGCCAGCCTTaGAGACGCGCCCTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFHSSQP*RRALSQ
Trigger: CTGGGAAAGGGCGCGTCTCAAAGGCTGGCTGGAGTG...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR CAA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGCGCTGCTCTAAGTGGTaGGTCAGGGGCGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRRCSKW*VRGAVS
Trigger: AGAGACAGCGCCCCTGACCAACCACTTAGAGCAGCG...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS TCA 90 bp TTCGGGAAAGGGCTGGATCAGTGGGGGTCTGGGCCAGGCCATGTCTaGGAAGCTAGGCAGAGACAGTACCTTATTCTTGATGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: FGKGLDQWGSGPGHV*EARQRQYLILDGSC
Trigger: GCAGGAGCCATCAAGAATAAGGTACTGTCTCTGCCTAGCTTCTCAGACATGGCCTGGCCCAGACCCCCACTGATCCAGCCCTTTCCCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529786.1
ENST00000531905.1
CDS-3UTR CAA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACGTGAGCAGAGAGGGTTaGGAGAGGTCATGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYVSREG*ERSWPL
Trigger: CAGGGGCCATGACCTCTCCAAACCCTCTCTGCTCAC...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000533035.5
CDS-3UTR CAA 90 bp GCACCTGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTGGGCCTTATTCTGACTGGGCCTTATTCTaGATGGCTCCTGCGTTGAAG +
Preference number: 5 (lower is better)
Translates to: APASAAGQTLLAPTGPYSDWALF*MAPALK
Trigger: CTTCAACGCAGGAGCCATCAAGAATAAGGCCCAGTC...AGAATAAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS TCA 90 bp ATGATGCTGCTGCAAAGGTCATCCAGTCGCTTGCGCTCCACAATGTaGTCCAGTACCAACTCCCCAGGGTTTGCTGCTGACAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: MMLLQRSSSRLRSTM*SSTNSPGFAADKPA
Trigger: GGCTGGCTTGTCAGCAGCAAACCCTGGGGAGTTGGTACTGGATCACATTGTGGAGCGCAAGCGACTGGATGACCTTTGCAGCAGCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525147.5
ENST00000531905.1
CDS TCA 90 bp ATGATGCTGCTGCAAAGGTCATCCAGTCGCTTGCGCTCCACAATGTaGTCCAGTACCAACTCCCCAGGGTTTGCGTGTGGGTCACGTGCA +
Preference number: 5 (lower is better)
Translates to: MMLLQRSSSRLRSTM*SSTNSPGFACGSRA
Trigger: TGCACGTGACCCACACGCAAACCCTGGGGAGTTGGTACTGGATCACATTGTGGAGCGCAAGCGACTGGATGACCTTTGCAGCAGCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530111.1
CDS TCA 90 bp GCAAAGCCAGCAAAATTACCTTCTGCTCCCGGAAGCGGCCGTCGATaGTGCTGCTGCAAAGGTCATCCAGTCGCTTGCGCTCCACAATGT +
Preference number: 5 (lower is better)
Translates to: AKPAKLPSAPGSGRR*CCCKGHPVACAPQC
Trigger: ACATTGTGGAGCGCAAGCGACTGGATGACCTTTGCAGCAGCATCATCGACGGCCGCTTCCGGGAGCAGAAGGTAATTTTGCTGGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS TCA 90 bp CAAGACTGCAGGGGCTGGGTACCCAAGAGGTCTTTAAAATGCTCCTaGCCTCAGCCCAAGAATGCAGGTACCTGGCTTCCTACTGTGCGC +
Preference number: 5 (lower is better)
Translates to: QDCRGWVPKRSLKCS*PQPKNAGTWLPTVR
Trigger: GCGCACAGTAGGAAGCCAGGTACCTGCATTCTTGGGCTGAGGTCAGGAGCATTTTAAAGACCTCTTGGGTACCCAGCCCCTGCAGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS TCA 90 bp GCCTCTCCACCTGCCTCACAGGGGCCTCCGCAGCTTTGCTCATGCTaGCACTCTTGTCTAGAAAGCCTTTTCTCCATCTCTCAACACTGC +
Preference number: 5 (lower is better)
Translates to: ASPPASQGPPQLCSC*HSCLESLFSISQHC
Trigger: GCAGTGTTGAGAGATGGAGAAAAGGCTTTCTAGACAAGAGTGTCAGCATGAGCAAAGCTGCGGAGGCCCCTGTGAGGCAGGTGGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS GCA 90 bp CAGAAAATCATACTCCCGCACTCCCACTTTGCCTTCCACTCCCCTTaGCCCTTCCTCACTGGCATGGAAGAGTCCTGGACTTCCGCAAGT +
Preference number: 5 (lower is better)
Translates to: QKIILPHSHFAFHSP*PFLTGMEESWTSAS
Trigger: ACTTGCGGAAGTCCAGGACTCTTCCATGCCAGTGAGGAAGGGGCAAGGGGAGTGGAAGGCAAAGTGGGAGTGCGGGAGTATGATTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 90 bp CAGTTTCTTCACCCACAAACCAAGGGAATGGCGTGTGCAGGGCCCTaGGGTCAGAAAGTCCACTCCTTGCTAGTGGATCTGTTAGGTGGG +
Preference number: 5 (lower is better)
Translates to: QFLHPQTKGMACAGP*GQKVHSLLVDLLGG
Trigger: CCCACCTAACAGATCCACTAGCAAGGAGTGGACTTTCTGACCCCAGGGCCCTGCACACGCCATTCCCTTGGTTTGTGGGTGAAGAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525006.1
CDS-3UTR CAA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATCGAACGAAGAGCGGGTaGGGACAGGCAGGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDRTKSG*GQAGSG
Trigger: CCCGCTGCCTGCCTGTCCCAACCCGCTCTTCGTTCG...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS-3UTR CAA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCTCCCCAGGGGGCTCCTaGGGCCCGATGCCCACATTC +
Preference number: 5 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVSPGGS*GPMPTF
Trigger: GAATGTGGGCATCGGGCCCAAGGAGCCCCCTGGGGA...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CAA 90 bp ACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGTCAGGAAGGCTGAGGTaGTGGACGGAACCATGCTCT +
Preference number: 5 (lower is better)
Translates to: TTGPDGIPGSCVFHKVPRSGRLR*WTEPCS
Trigger: AGAGCATGGTTCCGTCCACAACCTCAGCCTTCCTGA...CCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS TCA 90 bp ATGATGCTGCTGCAAAGGTCATCCAGTCGCTTGCGCTCCACAATGTaGTCCAGTACCAACTCCCCAGGGTTTGCTGCTGGGTCTCTAGGA +
Preference number: 5 (lower is better)
Translates to: MMLLQRSSSRLRSTM*SSTNSPGFAAGSLG
Trigger: TCCTAGAGACCCAGCAGCAAACCCTGGGGAGTTGGTACTGGATCACATTGTGGAGCGCAAGCGACTGGATGACCTTTGCAGCAGCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529374.5
CDS TCA 90 bp GGAACTAGGGAAGTGTACAGAGTGGACAGGGAGGGTCAGGCTGGATaGCCACATGCCTGGGCATCCATGATGTCACACTCAAAATGGTGC +
Preference number: 5 (lower is better)
Translates to: GTREVYRVDREGQAG*PHAWASMMSHSKWC
Trigger: GCACCATTTTGAGTGTGACATCATGGATGCCCAGGCATGTGGTCATCCAGCCTGACCCTCCCTGTCCACTCTGTACACTTCCCTAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS-3UTR CAA 90 bp TGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATGGCGTGAGCAGAGAGGGTTaGGAGAGGTCATGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: CVFHKVPRARHLLHDTYGVSREG*ERSWPL
Trigger: CAGGGGCCATGACCTCTCCAAACCCTCTCTGCTCAC...GCCATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000533035.5
CDS-3UTR CAA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCAGTGTCTCTTGTTCCTaGGGGGTGGCACAGGCATCA +
Preference number: 5 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFSVSCS*GVAQAS
Trigger: TGATGCCTGTGCCACCCCCAAGGAACAAGAGACACT...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CAA 90 bp GTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACAGTGTCTCTTGTTCCTaGGGGGTGGCACAGGCATCA +
Preference number: 5 (lower is better)
Translates to: VSLVPAYFTRSPGLGIFYSVSCS*GVAQAS
Trigger: TGATGCCTGTGCCACCCCCAAGGAACAAGAGACACT...GTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS TCA 90 bp ATGATGCTGCTGCAAAGGTCATCCAGTCGCTTGCGCTCCACAATGTaGTCCAGTACCAACTCCCCAGGGTTTGCTGGGTCTCTAGGATTG +
Preference number: 5 (lower is better)
Translates to: MMLLQRSSSRLRSTM*SSTNSPGFAGSLGL
Trigger: CAATCCTAGAGACCCAGCAAACCCTGGGGAGTTGGTACTGGATCACATTGTGGAGCGCAAGCGACTGGATGACCTTTGCAGCAGCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000530928.5
ENST00000533035.5
CDS-3UTR CAA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGCTGGGTCTCTAGGATaGGTCTCCTGGGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTAGSLG*VSWATH
Trigger: GTGGGTGGCCCAGGAGACCAATCCTAGAGACCCAGC...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CAA 90 bp ATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTTGATGGCTCCTGCGTaGAAGTCACTGAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: MVSLVPAYFTRSPGLGIFLMAPA*KSLKVR
Trigger: CCTCACCTTCAGTGACTTCAACGCAGGAGCCATCAA...GAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGATACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000533035.5
CDS-3UTR CAA 90 bp TCCCTGGTTCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGTTGATGGCTCCTGCGTaGAAGTCACTGAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SLVPAYFTRSPGLGIFYMLMAPA*KSLKVR
Trigger: CCTCACCTTCAGTGACTTCAACGCAGGAGCCATCAA...CATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGAACCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000533035.5
CDS CCA 90 bp CACCCAGCAGCAAGTACCAAGGTACAGCCTCTGTATTTCCACTCCTaGAGGTTTATGCCTTGTTTATCCAAGACTGCAGGGGCTGGGTAC +
Preference number: 5 (lower is better)
Translates to: HPAASTKVQPLYFHS*RFMPCLSKTAGAGY
Trigger: GTACCCAGCCCCTGCAGTCTTGGATAAACAAGGCATAAACCTCCAGGAGTGGAAATACAGAGGCTGTACCTTGGTACTTGCTGCTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS-3UTR CAA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGTCTCCAACGTGCAGCTaGCGCACCGTGTGGGTCACG +
Preference number: 5 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKSPTCS*RTVWVT
Trigger: CGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGA...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CAA 90 bp TTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGGTCACGCAGCGCCTGAGCTaGGCGGCTCTAAGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: LKTTGPDGIPGSCVFHKVTQRLS*AALRSL
Trigger: AAGAGACCTTAGAGCCGCCAAGCTCAGGCGCTGCGT...GACCTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS GCA 90 bp CAAGTACCAAGGTACAGCCTCTGTATTTCCACTCCTGGAGGTTTATaGCTTGTTTATCCAAGACTGCAGGGGCTGGGTACCCAAGAGGTC +
Preference number: 5 (lower is better)
Translates to: QVPRYSLCISTPGGL*LVYPRLQGLGTQEV
Trigger: GACCTCTTGGGTACCCAGCCCCTGCAGTCTTGGATAAACAAGGCATAAACCTCCAGGAGTGGAAATACAGAGGCTGTACCTTGGTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS-3UTR CAA 90 bp TCCTGCGTATTTCACAAGGTCCCCAGGGCTAGGCATCTTCTACATGACACATATAGTGTCTCTTGTTCCTaGGGGGTGGCACAGGCATCA +
Preference number: 5 (lower is better)
Translates to: SCVFHKVPRARHLLHDTYSVSCS*GVAQAS
Trigger: TGATGCCTGTGCCACCCCCAAGGAACAAGAGACACT...ATATGTGTCATGTAGAAGATGCCTAGCCCTGGGGACCTTGTGAAATACGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS-3UTR CAA 90 bp GACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGGACCAGATTCAGGAAGGCTGAGGTaGTGGACGGAACCATGCTCT +
Preference number: 5 (lower is better)
Translates to: DQGIPGAKQLCLKTTGPDSGRLR*WTEPCS
Trigger: AGAGCATGGTTCCGTCCACAACCTCAGCCTTCCTGA...ATCTGGTCCAGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CAA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTAGTGTCTCTTGTTCCTaGGGGGTGGCACAGGCATCA +
Preference number: 5 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTSVSCS*GVAQAS
Trigger: TGATGCCTGTGCCACCCCCAAGGAACAAGAGACACT...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529742.1
ENST00000533035.5
CDS CCA 90 bp TCTTTCTTTTTGAAATTGAATGCTCTGAAGGGAGTCTGCTCACTTTaGGTCACCAAAGGTCCCACCAGTCCCAAGAGCCACATGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SFFLKLNALKGVCSL*VTKGPTSPKSHMWP
Trigger: AGGCCACATGTGGCTCTTGGGACTGGTGGGACCTTTGGTGACCCAAAGTGAGCAGACTCCCTTCAGAGCATTCAATTTCAAAAAGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525006.1
CDS-3UTR CAA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTGACTGGGCCTTATTCTaGATGGCTCCTGCGTTGAAG +
Preference number: 5 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTDWALF*MAPALK
Trigger: CTTCAACGCAGGAGCCATCAAGAATAAGGCCCAGTC...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000533035.5
CDS-3UTR CAA 90 bp CATCTCCCTGACCAGGGAATTCCAGGTGCTAAGCAGCTTTGTTTAAAAACCACTTTGATGGCTCCTGCGTaGAAGTCACTGGTAGAGTCT +
Preference number: 5 (lower is better)
Translates to: HLPDQGIPGAKQLCLKTTLMAPA*KSLVES
Trigger: AGACTCTACCAGTGACTTCAACGCAGGAGCCATCAA...AGTGGTTTTTAAACAAAGCTGCTTAGCACCTGGAATTCCCTGGTCAGGGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS-3UTR CAA 90 bp TGTTTAAAAACCACTGGACCAGATGGTATCCCTGGTTCCTGCGTATTTCACAAGAGATGGAGACTGGTCTaGAAAAGAGTCCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: CLKTTGPDGIPGSCVFHKRWRLV*KRVQER
Trigger: CCTCTCCTGGACTCTTTTCAAGACCAGTCTCCATCT...CTTGTGAAATACGCAGGAACCAGGGATACCATCTGGTCCAGTGGTTTTTAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS CCA 72 bp TCCAGGAGAGGCGGGGGCCGTGCATCGGGCGAGGGCTaGAACGGCGCTGTCTGTCGGCGCGTGCGCGCACGC +
Preference number: 6 (lower is better)
Translates to: SRRGGGRASGEG*NGAVCRRVRAR
Trigger: GCGTGCGCGCACGCGCCGACAGACAGCGCCGTTCCAGCCCTCGCCCGATGCACGGCCCCCGCCTCTCCTGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529857.5
CDS CAA 90 bp GTCGCCTCGTCCCGCCACTCGGTCAGCCAGCGAACGAAGAGCGGGTaGGGACAGGCAGGCAGCGGGCGCTTCCGGCCCAGGCGGACCGGG +
Preference number: 6 (lower is better)
Translates to: VASSRHSVSQRTKSG*GQAGSGRFRPRRTG
Trigger: CCCGGTCCGCCTGGGCCGGAAGCGCCCGCTGCCTGCCTGTCCCAACCCGCTCTTCGTTCGCTGGCTGACCGAGTGGCGGGACGAGGCGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000525768.5
ENST00000529857.5
CDS CCA 72 bp CGCTCCACGCCCGCGGGACTGGGACGCCGCCAGTTCTaGAGTCGGGATTCGAACACCTGGCCCAGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: RSTPAGLGRRQF*SRDSNTWPRAG
Trigger: CCCCGCCCTGGGCCAGGTGTTCGAATCCCGACTCCAGAACTGGCGGCGTCCCAGTCCCGCGGGCGTGGAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000525768.5
CDS CCA 72 bp CCCGCCACTCGGTCAGCCAGCGAACGAAGAGCGGGTTaGGACAGGCAGGCAGCGGGCGCTTCCGGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PATRSASERRAG*DRQAAGASGPG
Trigger: GCCTGGGCCGGAAGCGCCCGCTGCCTGCCTGTCCCAACCCGCTCTTCGTTCGCTGGCTGACCGAGTGGCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000525768.5
ENST00000529857.5
CDS CCA 72 bp GAGGGCGGGTCCTCCGGCGCTCCACGCCCGCGGGACTaGGACGCCGCCAGTTCTGGAGTCGGGATTCGAACA +
Preference number: 6 (lower is better)
Translates to: EGGSSGAPRPRD*DAASSGVGIRT
Trigger: TGTTCGAATCCCGACTCCAGAACTGGCGGCGTCCCAGTCCCGCGGGCGTGGAGCGCCGGAGGACCCGCCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000525768.5
ENST00000529857.5
CDS CAA 72 bp TCCCGCCACTCGGTCAGCCAGCGAACGAAGAGCGGGTaGGGACAGGCAGGCAGCGGGCGCTTCCGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SRHSVSQRTKSG*GQAGSGRFRPR
Trigger: CCTGGGCCGGAAGCGCCCGCTGCCTGCCTGTCCCAACCCGCTCTTCGTTCGCTGGCTGACCGAGTGGCGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308110.9
ENST00000525768.5
ENST00000529857.5
CDS GCA 72 bp GCGCCTTCTGAAATACGAAGCGCGTGCGGCGCCTGCTaGGGGTCGCCTCGTCCCGCCACTCGGTCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: APSEIRSACGAC*GSPRPATRSAS
Trigger: GCTGGCTGACCGAGTGGCGGGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000529857.5
CDS GCA 72 bp GCAGCGCCTTCTGAAATACGAAGCGCGTGCGGCGCCTaGTGCGGGTCGCCTCGTCCCGCCACTCGGTCAGCC +
Preference number: 6 (lower is better)
Translates to: AAPSEIRSACGA*CGSPRPATRSA
Trigger: GGCTGACCGAGTGGCGGGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGCGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000529857.5
CDS GCA 72 bp TCCGGGGCATGGTCACCGCCCGATGTTCGGTGCCGCTaGAGCCGCTCGTCCAGCATCCGGCAGAGCCCGTCT +
Preference number: 6 (lower is better)
Translates to: SGAWSPPDVRCR*SRSSSIRQSPS
Trigger: AGACGGGCTCTGCCGGATGCTGGACGAGCGGCTGCAGCGGCACCGAACATCGGGCGGTGACCATGCCCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525768.5
ENST00000529857.5
ENST00000533035.5
CDS GCA 72 bp GGTGAGTCCGGGGCATGGTCACCGCCCGATGTTCGGTaGCGCTGCAGCCGCTCGTCCAGCATCCGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: GESGAWSPPDVR*RCSRSSSIRQS
Trigger: GCTCTGCCGGATGCTGGACGAGCGGCTGCAGCGGCACCGAACATCGGGCGGTGACCATGCCCCGGACTCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525768.5
ENST00000529857.5
ENST00000533035.5
CDS GCA 72 bp GGAGGGAACGCAGCGCCTTCTGAAATACGAAGCGCGTaGGGCGCCTGCTGCGGGTCGCCTCGTCCCGCCACT +
Preference number: 6 (lower is better)
Translates to: GGNAAPSEIRSA*GACCGSPRPAT
Trigger: AGTGGCGGGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGCGCTGCGTTCCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308110.9
ENST00000529857.5
CDS GCA 72 bp CCACCTTCTGAAATACGAAGCGCGTGCGGCGCCTGCTaGGGGTCGCCTCGTCCCGCCACTCGGTCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: PPSEIRSACGAC*GSPRPATRSAS
Trigger: GCTGGCTGACCGAGTGGCGGGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525768.5
CDS GCA 72 bp GACCCACCTTCTGAAATACGAAGCGCGTGCGGCGCCTaGTGCGGGTCGCCTCGTCCCGCCACTCGGTCAGCC +
Preference number: 6 (lower is better)
Translates to: DPPSEIRSACGA*CGSPRPATRSA
Trigger: GGCTGACCGAGTGGCGGGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGTGGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525768.5
CDS GCA 72 bp CCACGCCAGGACCCACCTTCTGAAATACGAAGCGCGTaGGGCGCCTGCTGCGGGTCGCCTCGTCCCGCCACT +
Preference number: 6 (lower is better)
Translates to: PRQDPPSEIRSA*GACCGSPRPAT
Trigger: AGTGGCGGGACGAGGCGACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGTGGGTCCTGGCGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525768.5
CDS CCA 72 bp GCAGGGGTAGGGTACCTGGTCAGGGCAGGCCTGACCTaGCCAGCAGCTTTTCCCATCGGGCCACGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: AGVGYLVRAGLT*PAAFPIGPRQD
Trigger: GTCCTGGCGTGGCCCGATGGGAAAAGCTGCTGGCCAGGTCAGGCCTGCCCTGACCAGGTACCCTACCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525768.5
CDS GCA 72 bp TCACTCGGGCTCCTGAGTGCCGAGCTGGCCAGTAGCTaGCAGAGCCTCCCGCTTTGGGCTGGGCAGGAACTG +
Preference number: 6 (lower is better)
Translates to: SLGLLSAELASS*QSLPLWAGQEL
Trigger: CAGTTCCTGCCCAGCCCAAAGCGGGAGGCTCTGGCAGCTACTGGCCAGCTCGGCACTCAGGAGCCCGAGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525768.5
ENST00000529374.5
ENST00000530111.1
ENST00000533035.5
ENST00000533555.5
CDS GCA 72 bp TCTCCAACGTGCAGCTTGCGCACCGTGTGGGTCACGTaGAGCCGCTGTAGCTCTCGGAGCAGCTCCGGCCTG +
Preference number: 6 (lower is better)
Translates to: SPTCSLRTVWVT*SRCSSRSSSGL
Trigger: CAGGCCGGAGCTGCTCCGAGAGCTACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS GCA 72 bp GCCTTCTCCCCACTCACTCCGCGCACCTGCATCAGCTaGCGGGCAAACACTTCTCGCACCGACTGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: AFSPLTPRTCIS*RANTSRTDWAW
Trigger: CCAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529786.1
ENST00000531905.1
ENST00000533519.1
CDS GCA 72 bp TCACTCGGGCTCCTGAGTGCCGAGCTGGCCAGTAGCTaGCAGAGCCTCCCGCTTTGGGCTGGGCAGGAACCT +
Preference number: 6 (lower is better)
Translates to: SLGLLSAELASS*QSLPLWAGQEP
Trigger: AGGTTCCTGCCCAGCCCAAAGCGGGAGGCTCTGGCAGCTACTGGCCAGCTCGGCACTCAGGAGCCCGAGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 72 bp CTGCCCCTGGTGCCAGCCTGTCCACGGCCCTTCACCTaGGTCTCTAGGATTGGTCTCCTGGGCCACCCACAC +
Preference number: 6 (lower is better)
Translates to: LPLVPACPRPFT*VSRIGLLGHPH
Trigger: GTGTGGGTGGCCCAGGAGACCAATCCTAGAGACCCAGGTGAAGGGCCGTGGACAGGCTGGCACCAGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525147.5
ENST00000531905.1
CDS CAA 72 bp GCTCCTGGCACTGCTGTCTCCTCCCCAGGGGGCTCCTaGGGCCCGATGCCCACATTCAGCAAGCTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: APGTAVSSPGGS*GPMPTFSKLRP
Trigger: AGGCCTGAGCTTGCTGAATGTGGGCATCGGGCCCAAGGAGCCCCCTGGGGAGGAGACAGCAGTGCCAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530111.1
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
ENST00000533555.5
CDS TCA 72 bp CTCCCGGTAGAGCACCAGCAGTATCACTCGGGCTCCTaGGTGCCGAGCTGGCCAGTAGCTGCCAGAGCCTCC +
Preference number: 6 (lower is better)
Translates to: LPVEHQQYHSGS*VPSWPVAARAS
Trigger: GGAGGCTCTGGCAGCTACTGGCCAGCTCGGCACTCAGGAGCCCGAGTGATACTGCTGGTGCTCTACCGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525768.5
ENST00000529374.5
ENST00000530111.1
ENST00000531905.1
ENST00000533035.5
ENST00000533555.5
CDS TCA 72 bp GGGCCCGATGCCCACATTCAGCAAGCTCAGGCCTTCTaGCTCGGCCAACTTCTGGGCCAGCTCCAGGCCCTC +
Preference number: 6 (lower is better)
Translates to: GPDAHIQQAQAF*LGQLLGQLQAL
Trigger: GAGGGCCTGGAGCTGGCCCAGAAGTTGGCCGAGTCAGAAGGCCTGAGCTTGCTGAATGTGGGCATCGGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530111.1
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
ENST00000533555.5
CDS TCA 72 bp AGCTTTTCCCATCGGGCCACGCCAGGACCCACCTTCTaGAATACGAAGCGCGTGCGGCGCCTGCTGCGGGTC +
Preference number: 6 (lower is better)
Translates to: SFSHRATPGPTF*NTKRVRRLLRV
Trigger: GACCCGCAGCAGGCGCCGCACGCGCTTCGTATTTCAGAAGGTGGGTCCTGGCGTGGCCCGATGGGAAAAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525768.5
CDS TCA 72 bp TCTGTTAGGTGGGAGGGGGCCAGGGGCGGCTCACAGTaGGCTGCTCACAGTGACTGGCAGCCGCATGCATGG +
Preference number: 6 (lower is better)
Translates to: SVRWEGARGGSQ*AAHSDWQPHAW
Trigger: CCATGCATGCGGCTGCCAGTCACTGTGAGCAGCTCACTGTGAGCCGCCCCTGGCCCCCTCCCACCTAACAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525006.1
CDS TCA 72 bp GGAGGCTGCCAGAAGTGCCCCTGGATTGCTCTGGGCTaGAAACGGGGCTTCGGAGCAGGCAGGGAAGCCTGG +
Preference number: 6 (lower is better)
Translates to: GGCQKCPWIALG*KRGFGAGREAW
Trigger: CCAGGCTTCCCTGCCTGCTCCGAAGCCCCGTTTTCAGCCCAGAGCAATCCAGGGGCACTTCTGGCAGCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS GCA 72 bp CCTGGCAGGGGTGCTGTATCGATCCACCAGGGCTGCTaGCTTCTCCCCACTCACTCCGCGCACCTGCATCAG +
Preference number: 6 (lower is better)
Translates to: PGRGAVSIHQGC*LLPTHSAHLHQ
Trigger: CTGATGCAGGTGCGCGGAGTGAGTGGGGAGAAGGCAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS GCA 72 bp CAGTACCAACTCCCCAGGGTTTGCGTGTGGGTCACGTaGAGCCGCTGTAGCTCTCGGAGCAGCTCCGGCCTG +
Preference number: 6 (lower is better)
Translates to: QYQLPRVCVWVT*SRCSSRSSSGL
Trigger: CAGGCCGGAGCTGCTCCGAGAGCTACAGCGGCTGCACGTGACCCACACGCAAACCCTGGGGAGTTGGTACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530111.1
CDS CCA 72 bp GCTTTGGGCTGGGCAGGAACTGGCATGGAAGAGTCCTaGACTTCCGCAAGTCGCCCCTGCGGGGCTGGACTG +
Preference number: 6 (lower is better)
Translates to: ALGWAGTGMEES*TSASRPCGAGL
Trigger: CAGTCCAGCCCCGCAGGGGCGACTTGCGGAAGTCCAGGACTCTTCCATGCCAGTTCCTGCCCAGCCCAAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525768.5
ENST00000529374.5
ENST00000529857.5
ENST00000533035.5
ENST00000533555.5
CDS CCA 72 bp CTCCTGGCACTGCTGTCTCCTCCCCAGGGGGCTCCTTaGGCCCGATGCCCACATTCAGCAAGCTCAGGCCTT +
Preference number: 6 (lower is better)
Translates to: LLALLSPPQGAP*ARCPHSASSGL
Trigger: AAGGCCTGAGCTTGCTGAATGTGGGCATCGGGCCCAAGGAGCCCCCTGGGGAGGAGACAGCAGTGCCAGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530111.1
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
ENST00000533555.5
CDS CCA 72 bp TTCTCGCACCGACTGGGCCTGGGTTCGGGAAAGGGCTaGATCAGTGGGGGTCTGGGCCAGGCCATGTCTGAG +
Preference number: 6 (lower is better)
Translates to: FSHRLGLGSGKG*ISGGLGQAMSE
Trigger: CTCAGACATGGCCTGGCCCAGACCCCCACTGATCCAGCCCTTTCCCGAACCCAGGCCCAGTCGGTGCGAGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529786.1
ENST00000531905.1
CDS CCA 72 bp TGGGACGTCTCCCTCCCTCCTGTGGCCTCCACTACCTaGGACACTATGTGGGCCTGCTGGCTTCCTCCCCAC +
Preference number: 6 (lower is better)
Translates to: WDVSLPPVASTT*DTMWACWLPPH
Trigger: GTGGGGAGGAAGCCAGCAGGCCCACATAGTGTCCCAGGTAGTGGAGGCCACAGGAGGGAGGGAGACGTCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS CAA 90 bp GCTGAAGCTGCTCCTGGCACTGCTGTCTCCTCCCCAGGGGGCTCCTaGGGCCCGATGCCCACATTCAGCAAGCTCAGGCCTTCTGACTCG +
Preference number: 6 (lower is better)
Translates to: AEAAPGTAVSSPGGS*GPMPTFSKLRPSDS
Trigger: CGAGTCAGAAGGCCTGAGCTTGCTGAATGTGGGCATCGGGCCCAAGGAGCCCCCTGGGGAGGAGACAGCAGTGCCAGGAGCAGCTTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530111.1
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
ENST00000533555.5
CDS GCA 72 bp CGCTCGTCCAGCATCCGGCAGAGCCCGTCTCCGAAGTaGTGTAGGATCTTAGCTTCCTTCCCGCTGCGCAGC +
Preference number: 6 (lower is better)
Translates to: RSSSIRQSPSPK*CRILASFPLRS
Trigger: GCTGCGCAGCGGGAAGGAAGCTAAGATCCTACAGCACTTCGGAGACGGGCTCTGCCGGATGCTGGACGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525768.5
ENST00000529857.5
ENST00000533035.5
CDS CCA 72 bp TGCATCAGCTGCCGGGCAAACACTTCTCGCACCGACTaGGCCTGGGTTCGGGAAAGGGCTGGATCAGTGGGG +
Preference number: 6 (lower is better)
Translates to: CISCRANTSRTD*AWVRERAGSVG
Trigger: CCCCACTGATCCAGCCCTTTCCCGAACCCAGGCCCAGTCGGTGCGAGAAGTGTTTGCCCGGCAGCTGATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529786.1
ENST00000531905.1
ENST00000533519.1
CDS CCA 72 bp GGGCTGAGGACACCTAAGGGCCCTTTAGGGCCTACCTaGCAGGGGTGCTGTATCGATCCACCAGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GLRTPKGPLGPT*QGCCIDPPGLL
Trigger: CAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGGTAGGCCCTAAAGGGCCCTTAGGTGTCCTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS CCA 72 bp GTGGCCTCCACTACCTGGGACACTATGTGGGCCTGCTaGCTTCCTCCCCACTTGACCTCCACGAGCACCCTG +
Preference number: 6 (lower is better)
Translates to: VASTTWDTMWAC*LPPHLTSTSTL
Trigger: CAGGGTGCTCGTGGAGGTCAAGTGGGGAGGAAGCCAGCAGGCCCACATAGTGTCCCAGGTAGTGGAGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS CCA 72 bp CTCCCTCCTGTGGCCTCCACTACCTGGGACACTATGTaGGCCTGCTGGCTTCCTCCCCACTTGACCTCCACG +
Preference number: 6 (lower is better)
Translates to: LPPVASTTWDTM*ACWLPPHLTST
Trigger: CGTGGAGGTCAAGTGGGGAGGAAGCCAGCAGGCCCACATAGTGTCCCAGGTAGTGGAGGCCACAGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS CAA 90 bp GGATTGGTCTCCTGGGCCACCCACACAAAATCTCCAACGTGCAGCTaGCGCACCGTGTGGGTCACGTGCAGCCGCTGTAGCTCTCGGAGC +
Preference number: 6 (lower is better)
Translates to: GLVSWATHTKSPTCS*RTVWVTCSRCSSRS
Trigger: GCTCCGAGAGCTACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCAGGAGACCAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS TCA 72 bp CTGCAGGCCCCGCGTCAAGAGGGCCAGGTAGGCGGCTaGCTCCTTAATGTCTGCTGTGCGCTGAGTGTTGGT +
Preference number: 6 (lower is better)
Translates to: LQAPRQEGQVGG*LLNVCCALSVG
Trigger: ACCAACACTCAGCGCACAGCAGACATTAAGGAGTCAGCCGCCTACCTGGCCCTCTTGACGCGGGGCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525224.5
CDS GCA 72 bp GGCATGGAAGAGTCCTGGACTTCCGCAAGTCGCCCCTaGGGGGCTGGACTGTTCTCTCCAGATGGTGAGTCC +
Preference number: 6 (lower is better)
Translates to: GMEESWTSASRP*GAGLFSPDGES
Trigger: GGACTCACCATCTGGAGAGAACAGTCCAGCCCCGCAGGGGCGACTTGCGGAAGTCCAGGACTCTTCCATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525768.5
ENST00000529374.5
ENST00000529857.5
ENST00000531905.1
ENST00000533035.5
ENST00000533555.5
CDS GCA 72 bp CCTGGGCCACCCACACAAAATCTCCAACGTGCAGCTTaGGCACCGTGTGGGTCACGTGCAGCCGCTGTAGCT +
Preference number: 6 (lower is better)
Translates to: PGPPTQNLQRAA*APCGSRAAAVA
Trigger: AGCTACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS GCA 72 bp TTGGTCTCCTGGGCCACCCACACAAAATCTCCAACGTaGAGCTTGCGCACCGTGTGGGTCACGTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: LVSWATHTKSPT*SLRTVWVTCSR
Trigger: GCGGCTGCACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCAGGAGACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525147.5
ENST00000529374.5
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS GCA 72 bp ACACCTAAGGGCCCTTTAGGGCCTACCTGGCAGGGGTaGTGTATCGATCCACCAGGGCTGCTGCCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: TPKGPLGPTWQG*CIDPPGLLPSP
Trigger: GGGAGAAGGCAGCAGCCCTGGTGGATCGATACAGCACCCCTGCCAGGTAGGCCCTAAAGGGCCCTTAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS GCA 72 bp CTCCACGAGCACCCTGGGATCTGTCTATCTCTGGTCTaGAGAGCCCACACAAGGCCAGGCCCCCTCCACGAA +
Preference number: 6 (lower is better)
Translates to: LHEHPGICLSLV*RAHTRPGPLHE
Trigger: TTCGTGGAGGGGGCCTGGCCTTGTGTGGGCTCTGCAGACCAGAGATAGACAGATCCCAGGGTGCTCGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS GCA 72 bp GCCACAGGGTGGGTGTGGCTGGATTCCAAAGGGCTCTaGCTCAAGGAGGCTGCCAGAAGTGCCCCTGGATTG +
Preference number: 6 (lower is better)
Translates to: ATGWVWLDSKGL*LKEAARSAPGL
Trigger: CAATCCAGGGGCACTTCTGGCAGCCTCCTTGAGGCAGAGCCCTTTGGAATCCAGCCACACCCACCCTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS GCA 72 bp AATGGTGCCGGGACCCTGTTCCCACCAGTTAGCCTCTaGATCCTCCCTAGCCTCTCCACCTGCCTCACAGGG +
Preference number: 6 (lower is better)
Translates to: NGAGTLFPPVSL*ILPSLSTCLTG
Trigger: CCCTGTGAGGCAGGTGGAGAGGCTAGGGAGGATGCAGAGGCTAACTGGTGGGAACAGGGTCCCGGCACCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 72 bp TCTTCTCCACCAGGTGGGACGTCTCCCTCCCTCCTGTaGCCTCCACTACCTGGGACACTATGTGGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: SSPPGGTSPSLL*PPLPGTLCGPA
Trigger: AGCAGGCCCACATAGTGTCCCAGGTAGTGGAGGCCACAGGAGGGAGGGAGACGTCCCACCTGGTGGAGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS CCA 72 bp GCCGAGCTGGCCAGTAGCTGCCAGAGCCTCCCGCTTTaGGCTGGGCAGGAACCTGAAAGGTACAGAGGAGTT +
Preference number: 6 (lower is better)
Translates to: AELASSCQSLPL*AGQEPERYRGV
Trigger: AACTCCTCTGTACCTTTCAGGTTCCTGCCCAGCCCAAAGCGGGAGGCTCTGGCAGCTACTGGCCAGCTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 72 bp GGTCTGATCCTGGAGCAGCCACAGGGTGGGTGTGGCTaGATTCCAAAGGGCTCTGCCTCAAGGAGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: GLILEQPQGGCG*IPKGSASRRLP
Trigger: TGGCAGCCTCCTTGAGGCAGAGCCCTTTGGAATCCAGCCACACCCACCCTGTGGCTGCTCCAGGATCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS CAA 72 bp TCCTGGGCCACCCACACAAAATCTCCAACGTGCAGCTaGCGCACCGTGTGGGTCACGTGCAGCCGCTGTAGC +
Preference number: 6 (lower is better)
Translates to: SWATHTKSPTCS*RTVWVTCSRCS
Trigger: GCTACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS CAA 90 bp CCCTGGTGCCAGCCTGTCCACGGCCCTTCACCTGGGTCTCTAGGATaGGTCTCCTGGGCCACCCACACAAAATCTCCAACGTGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: PWCQPVHGPSPGSLG*VSWATHTKSPTCSL
Trigger: CAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCAGGAGACCAATCCTAGAGACCCAGGTGAAGGGCCGTGGACAGGCTGGCACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525147.5
ENST00000531905.1
CDS CCA 72 bp CACACAAAATCTCCAACGTGCAGCTTGCGCACCGTGTaGGTCACGTGCAGCCGCTGTAGCTCTCGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: HTKSPTCSLRTV*VTCSRCSSRSS
Trigger: GCTGCTCCGAGAGCTACAGCGGCTGCACGTGACCCACACGGTGCGCAAGCTGCACGTTGGAGATTTTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000529374.5
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS CCA 72 bp CGGGGGCTAGGAGACAAACGGGTGCAAACGTATTGGTaGGAGGGACACCCAGAAATGGGTGCCGGGGATGAG +
Preference number: 6 (lower is better)
Translates to: RGLGDKRVQTYW*EGHPEMGAGDE
Trigger: CTCATCCCCGGCACCCATTTCTGGGTGTCCCTCCCACCAATACGTTTGCACCCGTTTGTCTCCTAGCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS CCA 72 bp AGGCGGGGGCTAGGAGACAAACGGGTGCAAACGTATTaGTGGGAGGGACACCCAGAAATGGGTGCCGGGGAT +
Preference number: 6 (lower is better)
Translates to: RRGLGDKRVQTY*WEGHPEMGAGD
Trigger: ATCCCCGGCACCCATTTCTGGGTGTCCCTCCCACCAATACGTTTGCACCCGTTTGTCTCCTAGCCCCCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533035.5
CDS CAA 72 bp TTTGGGGATGCACAGGGCCCAGGCAAGGTGAATTCCTaGTGGGCTCTGTCCCGACACTGGGAAAGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: FGDAQGPGKVNS*WALSRHWERGL
Trigger: GAGGCCCCTTTCCCAGTGTCGGGACAGAGCCCACAAGGAATTCACCTTGCCTGGGCCCTGTGCATCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS CAA 90 bp GTGTTGGTGACAGCCTGCAGCAGTGTGCTCTCAGGAAGGCTGAGGTaGTGGACGGAACCATGCTCTTCCACCAGGTATACCCGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: VLVTACSSVLSGRLR*WTEPCSSTRYTRRS
Trigger: GGAGCGCCGGGTATACCTGGTGGAAGAGCATGGTTCCGTCCACAACCTCAGCCTTCCTGAGAGCACACTGCTGCAGGCTGTCACCAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525147.5
ENST00000525224.5
ENST00000529374.5
ENST00000529786.1
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS TCA 72 bp GGGACACTATGTGGGCCTGCTGGCTTCCTCCCCACTTaGCCTCCACGAGCACCCTGGGATCTGTCTATCTCT +
Preference number: 6 (lower is better)
Translates to: GTLCGPAGFLPT*PPRAPWDLSIS
Trigger: AGAGATAGACAGATCCCAGGGTGCTCGTGGAGGTCAAGTGGGGAGGAAGCCAGCAGGCCCACATAGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS GCA 72 bp GTGCTCTCAGGAAGGCTGAGGTTGTGGACGGAACCATaGTCTTCCACCAGGTATACCCGGCGCTCCAGACCA +
Preference number: 6 (lower is better)
Translates to: VLSGRLRLWTEP*SSTRYTRRSRP
Trigger: TGGTCTGGAGCGCCGGGTATACCTGGTGGAAGAGCATGGTTCCGTCCACAACCTCAGCCTTCCTGAGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000525147.5
ENST00000525224.5
ENST00000529374.5
ENST00000529786.1
ENST00000530928.5
ENST00000531905.1
ENST00000533035.5
CDS CAA 72 bp CAGCCTGTCCACGGCCCTTCACCTGGGTCTCTAGGATaGGTCTCCTGGGCCACCCACACAAAATCTCCAACG +
Preference number: 6 (lower is better)
Translates to: QPVHGPSPGSLG*VSWATHTKSPT
Trigger: CGTTGGAGATTTTGTGTGGGTGGCCCAGGAGACCAATCCTAGAGACCCAGGTGAAGGGCCGTGGACAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525147.5
ENST00000531905.1
CDS CAA 90 bp GTCGCTTGCGCTCCACAATGTGATCCAGTACCAACTCCCCAGGGTTaGCTGCTGACAAGCCAGCCGTTAGCTTGCGATCCCCTACCCACC +
Preference number: 6 (lower is better)
Translates to: VACAPQCDPVPTPQG*LLTSQPLACDPLPT
Trigger: GGTGGGTAGGGGATCGCAAGCTAACGGCTGGCTTGTCAGCAGCAAACCCTGGGGAGTTGGTACTGGATCACATTGTGGAGCGCAAGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525147.5
ENST00000531905.1
CDS CAA 90 bp TTGGGTCACCAAAGGTCCCACCAGTCCCAAGAGCCACATGTGGCCTaGAATCGTCAGTTAGCCTGGGTCAGACAGAGCAGGCTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: LGHQRSHQSQEPHVA*NRQLAWVRQSRLER
Trigger: CCTCTCCAGCCTGCTCTGTCTGACCCAGGCTAACTGACGATTCAAGGCCACATGTGGCTCTTGGGACTGGTGGGACCTTTGGTGACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525006.1
CDS GCA 72 bp GGCCCGAGGGCTGAGAAAACCGAAGGTTATGTAGCTTaGCCAGGCTCCTGCCTGCAGGAGATGGGTCTGATA +
Preference number: 6 (lower is better)
Translates to: GPRAEKTEGYVA*PGSCLQEMGLI
Trigger: TATCAGACCCATCTCCTGCAGGCAGGAGCCTGGGCAAGCTACATAACCTTCGGTTTTCTCAGCCCTCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529857.5
CDS GCA 72 bp GCAGGGAAGCCTGGCAAAGCCAGCAAAATTACCTTCTaGTCCCGGAAGCGGCCGTCGATGATGCTGCTGCAA +
Preference number: 6 (lower is better)
Translates to: AGKPGKASKITF*SRKRPSMMLLQ
Trigger: TTGCAGCAGCATCATCGACGGCCGCTTCCGGGAGCAGAAGGTAATTTTGCTGGCTTTGCCAGGCTTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS CCA 72 bp TTGGTCAGGGGCGCTGTCTCTAACGATCTTTTCCCTTaGCTCCACTCCAGCCAGCCTTTGAGACGCGCCCTT +
Preference number: 6 (lower is better)
Translates to: LVRGAVSNDLFP*LHSSQPLRRAL
Trigger: AAGGGCGCGTCTCAAAGGCTGGCTGGAGTGGAGCCAAGGGAAAAGATCGTTAGAGACAGCGCCCCTGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308110.9
CDS CCA 72 bp CACGGCCCTTCACCTGGGTCTCTAGGATTGGTCTCCTaGGCCACCCACACAAAATCTCCAACGTGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: HGPSPGSLGLVS*ATHTKSPTCSL
Trigger: CAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCAGGAGACCAATCCTAGAGACCCAGGTGAAGGGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525147.5
ENST00000531905.1
CDS CCA 72 bp ACAGCGCTTCAGCCGGAACTAGGGAAGTGTACAGAGTaGACAGGGAGGGTCAGGCTGGATGACCACATGCCT +
Preference number: 6 (lower is better)
Translates to: TALQPELGKCTE*TGRVRLDDHMP
Trigger: AGGCATGTGGTCATCCAGCCTGACCCTCCCTGTCCACTCTGTACACTTCCCTAGTTCCGGCTGAAGCGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS TCA 72 bp CTGCAAAGGTCATCCAGTCGCTTGCGCTCCACAATGTaGTCCAGTACCAACTCCCCAGGGTTTGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LQRSSSRLRSTM*SSTNSPGFAAG
Trigger: CCCAGCAGCAAACCCTGGGGAGTTGGTACTGGATCACATTGTGGAGCGCAAGCGACTGGATGACCTTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529374.5
CDS TCA 72 bp CTGCAAAGGTCATCCAGTCGCTTGCGCTCCACAATGTaGTCCAGTACCAACTCCCCAGGGTTTGCGTGTGGG +
Preference number: 6 (lower is better)
Translates to: LQRSSSRLRSTM*SSTNSPGFACG
Trigger: CCCACACGCAAACCCTGGGGAGTTGGTACTGGATCACATTGTGGAGCGCAAGCGACTGGATGACCTTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530111.1
CDS TCA 72 bp GCAAAATTACCTTCTGCTCCCGGAAGCGGCCGTCGATaGTGCTGCTGCAAAGGTCATCCAGTCGCTTGCGCT +
Preference number: 6 (lower is better)
Translates to: AKLPSAPGSGRR*CCCKGHPVACA
Trigger: AGCGCAAGCGACTGGATGACCTTTGCAGCAGCATCATCGACGGCCGCTTCCGGGAGCAGAAGGTAATTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS GCA 72 bp TTCTCGCACCGACTGGGCCTTATTCTTGATGGCTCCTaGGTTGAAGTCACTGGTAGAGTCTCTGCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: FSHRLGLILDGS*VEVTGRVSAGP
Trigger: GGGGCCTGCAGAGACTCTACCAGTGACTTCAACGCAGGAGCCATCAAGAATAAGGCCCAGTCGGTGCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524647.5
CDS CCA 72 bp TCCCCAGGGTTTGCTGGGTCTCTAGGATTGGTCTCCTaGGCCACCCACACAAAATCTCCAACGTGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SPGFAGSLGLVS*ATHTKSPTCSL
Trigger: CAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCAGGAGACCAATCCTAGAGACCCAGCAAACCCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308110.9
ENST00000524647.5
ENST00000530928.5
ENST00000533035.5
CDS CCA 72 bp CCAGGGTTTGCTGCTGGGTCTCTAGGATTGGTCTCCTaGGCCACCCACACAAAATCTCCAACGTGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: PGFAAGSLGLVS*ATHTKSPTCSL
Trigger: CAAGCTGCACGTTGGAGATTTTGTGTGGGTGGCCCAGGAGACCAATCCTAGAGACCCAGCAGCAAACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529374.5
CDS CAA 72 bp CGCACCGACTGGGCCTTATTCTTGATGGCTCCTGCGTaGAAGTCACTGAAGGTGAGGAGTGAGCAGAGAGGG +
Preference number: 6 (lower is better)
Translates to: RTDWALFLMAPA*KSLKVRSEQRG
Trigger: CCCTCTCTGCTCACTCCTCACCTTCAGTGACTTCAACGCAGGAGCCATCAAGAATAAGGCCCAGTCGGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308110.9
ENST00000529374.5
ENST00000530282.1
ENST00000530928.5
ENST00000533035.5
CDS CAA 72 bp GCTCCACAATGTGATCCAGTACCAACTCCCCAGGGTTaGCTGCTGACAAGCCAGCCGTTAGCTTGCGATCCC +
Preference number: 6 (lower is better)
Translates to: APQCDPVPTPQG*LLTSQPLACDP
Trigger: GGGATCGCAAGCTAACGGCTGGCTTGTCAGCAGCAAACCCTGGGGAGTTGGTACTGGATCACATTGTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525147.5
ENST00000531905.1
CDS CAA 72 bp CAAAGGTCCCACCAGTCCCAAGAGCCACATGTGGCCTaGAATCGTCAGTTAGCCTGGGTCAGACAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: QRSHQSQEPHVA*NRQLAWVRQSR
Trigger: CCTGCTCTGTCTGACCCAGGCTAACTGACGATTCAAGGCCACATGTGGCTCTTGGGACTGGTGGGACCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525006.1
CDS CAA 90 bp ATCCTCCCTAGCCTCTCCACCTGCCTCACAGGGGCCTCCGCAGCTTaGCTCATGCTGACACTCTTGTCTAGAAAGCCTTTTCTCCATCTC +
Preference number: 6 (lower is better)
Translates to: ILPSLSTCLTGASAA*LMLTLLSRKPFLHL
Trigger: GAGATGGAGAAAAGGCTTTCTAGACAAGAGTGTCAGCATGAGCAAAGCTGCGGAGGCCCCTGTGAGGCAGGTGGAGAGGCTAGGGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS TCA 72 bp GGGCTGGATCAGTGGGGGTCTGGGCCAGGCCATGTCTaGGAAGCTAGGCAGAGACAGTACCTTATTCTTGAT +
Preference number: 6 (lower is better)
Translates to: GLDQWGSGPGHV*EARQRQYLILD
Trigger: ATCAAGAATAAGGTACTGTCTCTGCCTAGCTTCTCAGACATGGCCTGGCCCAGACCCCCACTGATCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529786.1
ENST00000531905.1
CDS TCA 72 bp CTGCAAAGGTCATCCAGTCGCTTGCGCTCCACAATGTaGTCCAGTACCAACTCCCCAGGGTTTGCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: LQRSSSRLRSTM*SSTNSPGFAAD
Trigger: GTCAGCAGCAAACCCTGGGGAGTTGGTACTGGATCACATTGTGGAGCGCAAGCGACTGGATGACCTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525147.5
ENST00000531905.1
CDS GCA 72 bp CAGAGTGGACAGGGAGGGTCAGGCTGGATGACCACATaGCTGGGCATCCATGATGTCACACTCAAAATGGTG +
Preference number: 6 (lower is better)
Translates to: QSGQGGSGWMTT*LGIHDVTLKMV
Trigger: CACCATTTTGAGTGTGACATCATGGATGCCCAGGCATGTGGTCATCCAGCCTGACCCTCCCTGTCCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 72 bp GCTGGACTGTTCTCTCCAGATGGTGAGTCCGGGGCATaGTCACCTGCGGGAGAGAAAAGAGTTAACTCCACA +
Preference number: 6 (lower is better)
Translates to: AGLFSPDGESGA*SPAGEKRVNST
Trigger: TGTGGAGTTAACTCTTTTCTCTCCCGCAGGTGACCATGCCCCGGACTCACCATCTGGAGAGAACAGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533555.5
CDS CAA 90 bp GGCCAGGCCATGTCTGAGAAGCTAGGCAGAGACAGTACCTTATTCTaGATGGCTCCTGCGTTGAAGTCACTGGTAGAGTCTCTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: GQAMSEKLGRDSTLF*MAPALKSLVESLQA
Trigger: GGCCTGCAGAGACTCTACCAGTGACTTCAACGCAGGAGCCATCAAGAATAAGGTACTGTCTCTGCCTAGCTTCTCAGACATGGCCTGGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS TCA 72 bp AGGGGCTGGGTACCCAAGAGGTCTTTAAAATGCTCCTaGCCTCAGCCCAAGAATGCAGGTACCTGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: RGWVPKRSLKCS*PQPKNAGTWLP
Trigger: AGGAAGCCAGGTACCTGCATTCTTGGGCTGAGGTCAGGAGCATTTTAAAGACCTCTTGGGTACCCAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS TCA 72 bp CCTGCCTCACAGGGGCCTCCGCAGCTTTGCTCATGCTaGCACTCTTGTCTAGAAAGCCTTTTCTCCATCTCT +
Preference number: 6 (lower is better)
Translates to: PASQGPPQLCSC*HSCLESLFSIS
Trigger: AGAGATGGAGAAAAGGCTTTCTAGACAAGAGTGTCAGCATGAGCAAAGCTGCGGAGGCCCCTGTGAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS GCA 72 bp GCTAGGCAGAGACAGTACCTTATTCTTGATGGCTCCTaGGTTGAAGTCACTGGTAGAGTCTCTGCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: ARQRQYLILDGS*VEVTGRVSAGP
Trigger: GGGGCCTGCAGAGACTCTACCAGTGACTTCAACGCAGGAGCCATCAAGAATAAGGTACTGTCTCTGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529786.1
CDS GCA 72 bp AGGCCAGGCATCACTGGTGAGATTTGGACTCAGGCTTaGCAAATCCCCCAAGCCAGAAAATCATACTCCCGC +
Preference number: 6 (lower is better)
Translates to: RPGITGEIWTQA*QIPQARKSYSR
Trigger: GCGGGAGTATGATTTTCTGGCTTGGGGGATTTGGCAAGCCTGAGTCCAAATCTCACCAGTGATGCCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS GCA 72 bp GAGGTCTTTAAAATGCTCCTGACCTCAGCCCAAGAATaGAGGTACCTGGCTTCCTACTGTGCGCCTGGATGG +
Preference number: 6 (lower is better)
Translates to: EVFKMLLTSAQE*RYLASYCAPGW
Trigger: CCATCCAGGCGCACAGTAGGAAGCCAGGTACCTGCATTCTTGGGCTGAGGTCAGGAGCATTTTAAAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS GCA 72 bp TCTTGTCTAGAAAGCCTTTTCTCCATCTCTCAACACTaGCCATCCTTCAAGCCTCCCCTGGGCCGGCACATG +
Preference number: 6 (lower is better)
Translates to: SCLESLFSISQH*PSFKPPLGRHM
Trigger: CATGTGCCGGCCCAGGGGAGGCTTGAAGGATGGGCAGTGTTGAGAGATGGAGAAAAGGCTTTCTAGACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 72 bp CCTGAGAAATGGGGATCTCACCCACCTTGCTTCTTTTaGGGATGCACAGGGCCCAGGCAAGGTGAATTCCTT +
Preference number: 6 (lower is better)
Translates to: PEKWGSHPPCFF*GCTGPRQGEFL
Trigger: AAGGAATTCACCTTGCCTGGGCCCTGTGCATCCCCAAAAGAAGCAAGGTGGGTGAGATCCCCATTTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530928.5
ENST00000531905.1
CDS CAA 90 bp ACCTGCCTCACAGGGGCCTCCGCAGCTTTGCTCATGCTGACACTCTaGTCTAGAAAGCCTTTTCTCCATCTCTCAACACTGCCCATCCTT +
Preference number: 6 (lower is better)
Translates to: TCLTGASAALLMLTL*SRKPFLHLSTLPIL
Trigger: AAGGATGGGCAGTGTTGAGAGATGGAGAAAAGGCTTTCTAGACAAGAGTGTCAGCATGAGCAAAGCTGCGGAGGCCCCTGTGAGGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CAA 90 bp GGCCAGGCCATGTCTGAGAAGCTAGGCAGAGACAGTACCTTATTCTaGATGGCTCCTGCGTTGAAGTCACTGAAGGTGAGGAGTGAGCAG +
Preference number: 6 (lower is better)
Translates to: GQAMSEKLGRDSTLF*MAPALKSLKVRSEQ
Trigger: CTGCTCACTCCTCACCTTCAGTGACTTCAACGCAGGAGCCATCAAGAATAAGGTACTGTCTCTGCCTAGCTTCTCAGACATGGCCTGGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 72 bp ATTGATCTCAGTTTCTTCACCCACAAACCAAGGGAATaGCGTGTGCAGGGCCCTGGGGTCAGAAAGTCCACT +
Preference number: 6 (lower is better)
Translates to: IDLSFFTHKPRE*RVQGPGVRKST
Trigger: AGTGGACTTTCTGACCCCAGGGCCCTGCACACGCCATTCCCTTGGTTTGTGGGTGAAGAAACTGAGATCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525006.1
CDS CAA 72 bp GGCAGAGACAGTACCTTATTCTTGATGGCTCCTGCGTaGAAGTCACTGAAGGTGAGGAGTGAGCAGAGAGGG +
Preference number: 6 (lower is better)
Translates to: GRDSTLFLMAPA*KSLKVRSEQRG
Trigger: CCCTCTCTGCTCACTCCTCACCTTCAGTGACTTCAACGCAGGAGCCATCAAGAATAAGGTACTGTCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CAA 90 bp GAGAAGCTAGGCAGAGACAGTACCTTATTCTTGATGGCTCCTGCGTaGAAGTCACTGAAGGTGAGGAGTGAGCAGAGAGGGTTTGGAGAG +
Preference number: 6 (lower is better)
Translates to: EKLGRDSTLFLMAPA*KSLKVRSEQRGFGE
Trigger: CTCTCCAAACCCTCTCTGCTCACTCCTCACCTTCAGTGACTTCAACGCAGGAGCCATCAAGAATAAGGTACTGTCTCTGCCTAGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS TCA 72 bp AGGATAAGTCATTTGCTCAAGGCCAGGCATCACTGGTaGGATTTGGACTCAGGCTTGCCAAATCCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: RISHLLKARHHW*DLDSGLPNPPS
Trigger: GCTTGGGGGATTTGGCAAGCCTGAGTCCAAATCTCACCAGTGATGCCTGGCCTTGAGCAAATGACTTATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS GCA 72 bp AGGTACAGCCTCTGTATTTCCACTCCTGGAGGTTTATaGCTTGTTTATCCAAGACTGCAGGGGCTGGGTACC +
Preference number: 6 (lower is better)
Translates to: RYSLCISTPGGL*LVYPRLQGLGT
Trigger: GGTACCCAGCCCCTGCAGTCTTGGATAAACAAGGCATAAACCTCCAGGAGTGGAAATACAGAGGCTGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 72 bp TTGAAATTGAATGCTCTGAAGGGAGTCTGCTCACTTTaGGTCACCAAAGGTCCCACCAGTCCCAAGAGCCAC +
Preference number: 6 (lower is better)
Translates to: LKLNALKGVCSL*VTKGPTSPKSH
Trigger: GTGGCTCTTGGGACTGGTGGGACCTTTGGTGACCCAAAGTGAGCAGACTCCCTTCAGAGCATTCAATTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525006.1
CDS CAA 90 bp CTCTTTCTTTTTGAAATTGAATGCTCTGAAGGGAGTCTGCTCACTTaGGGTCACCAAAGGTCCCACCAGTCCCAAGAGCCACATGTGGCC +
Preference number: 6 (lower is better)
Translates to: LFLFEIECSEGSLLT*GHQRSHQSQEPHVA
Trigger: GGCCACATGTGGCTCTTGGGACTGGTGGGACCTTTGGTGACCCAAAGTGAGCAGACTCCCTTCAGAGCATTCAATTTCAAAAAGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525006.1
CDS GCA 72 bp CCACTCCTGGAGGTTTATGCCTTGTTTATCCAAGACTaGAGGGGCTGGGTACCCAAGAGGTCTTTAAAATGC +
Preference number: 6 (lower is better)
Translates to: PLLEVYALFIQD*RGWVPKRSLKC
Trigger: GCATTTTAAAGACCTCTTGGGTACCCAGCCCCTGCAGTCTTGGATAAACAAGGCATAAACCTCCAGGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CAA 90 bp TACCAAGGTACAGCCTCTGTATTTCCACTCCTGGAGGTTTATGCCTaGTTTATCCAAGACTGCAGGGGCTGGGTACCCAAGAGGTCTTTA +
Preference number: 6 (lower is better)
Translates to: YQGTASVFPLLEVYA*FIQDCRGWVPKRSL
Trigger: TAAAGACCTCTTGGGTACCCAGCCCCTGCAGTCTTGGATAAACAAGGCATAAACCTCCAGGAGTGGAAATACAGAGGCTGTACCTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CCA 72 bp GCAAGTACCAAGGTACAGCCTCTGTATTTCCACTCCTaGAGGTTTATGCCTTGTTTATCCAAGACTGCAGGG +
Preference number: 6 (lower is better)
Translates to: ASTKVQPLYFHS*RFMPCLSKTAG
Trigger: CCCTGCAGTCTTGGATAAACAAGGCATAAACCTCCAGGAGTGGAAATACAGAGGCTGTACCTTGGTACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CAA 72 bp ATGTCTGAGAAGCTAGGCAGAGACAGTACCTTATTCTaGATGGCTCCTGCGTTGAAGTCACTGAAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: MSEKLGRDSTLF*MAPALKSLKVR
Trigger: CCTCACCTTCAGTGACTTCAACGCAGGAGCCATCAAGAATAAGGTACTGTCTCTGCCTAGCTTCTCAGACAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531905.1
CDS CAA 72 bp ATGTCTGAGAAGCTAGGCAGAGACAGTACCTTATTCTaGATGGCTCCTGCGTTGAAGTCACTGGTAGAGTCT +
Preference number: 6 (lower is better)
Translates to: MSEKLGRDSTLF*MAPALKSLVES
Trigger: AGACTCTACCAGTGACTTCAACGCAGGAGCCATCAAGAATAAGGTACTGTCTCTGCCTAGCTTCTCAGACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529786.1