RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MUCL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000168631, ENSG00000229284, ENSG00000232308, ENSG00000257232

Ensembl transcript IDs: ENST00000304311.3, ENST00000414703.2, ENST00000416153.2, ENST00000448092.2, ENST00000462446.6, ENST00000546848.1, ENST00000547331.1, ENST00000548730.1, ENST00000614587.1, ENST00000636043.1

Found 583 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCAGTCCCTCCCTTTCCCCATAAACCCCACTCACAAGTCAGTCTaGGGCATTGCCTATAAGGCTCCTGTCCTTCCTTTAGGACTCAGT +
Preference number: 1 (lower is better)
Translates to: PQSLPFPINPTHKSV*GIAYKAPVLPLGLS
Trigger: ACTGAGTCCTAAAGGAAGGACAGGAGCCTTATAGGCAATGCCCCAGACTGACTTGTGAGTGGGGTTTATGGGGAAAGGGAGGGACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR TCA 90 bp CCTCCTTGCTTATCACCTCATTCCCCAACCAGTTTCAAGAACAGATaGAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTG +
Preference number: 1 (lower is better)
Translates to: PPCLSPHSPTSFKNR*RVNTGNRQYSLPFL
Trigger: CAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGGTTGGGGAATGAGGTGATAAGCAAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGATGGGGGCAAGGGTCCTaGGAACTCAGAGATGAGCCT +
Preference number: 2 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRWGQGS*ELRDEP
Trigger: AGGCTCATCTCTGAGTTCTCAGGACCCTTGCCCCCA...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCTGGGGGCAAGGGTCCTaGGAACTCAGAGATGAGCCT +
Preference number: 2 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPWGQGS*ELRDEP
Trigger: AGGCTCATCTCTGAGTTCTCAGGACCCTTGCCCCCA...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR CAA 90 bp TGGAGATCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTaGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTC +
Preference number: 2 (lower is better)
Translates to: WRSVGETAGQIKIPS*RVHPQPSKPNQQGV
Trigger: GACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGATCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR GCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATACCGTCAGTATTCTCTaGCCTTCCTGTAGTCCCGGA +
Preference number: 2 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHTVSIL*PSCSPG
Trigger: TCCGGGACTACAGGAAGGGCAGAGAATACTGACGGT...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR GCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACTCAGTGCAGTGTTCTaGATTGGTGCCCCCACAACA +
Preference number: 2 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRLSAVF*IGAPTT
Trigger: TGTTGTGGGGGCACCAATGCAGAACACTGCACTGAG...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATTGCAGTGTTCTGCATTaGTGCCCCCACAACATGTCC +
Preference number: 2 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHCSVLH*CPHNMS
Trigger: GGACATGTTGTGGGGGCACCAATGCAGAACACTGCA...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGAAACATAATGCTGTCCTaGAACCCAGAGACTCTGCCC +
Preference number: 2 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRNIMLS*NPETLP
Trigger: GGGCAGAGTCTCTGGGTTTCAGGACAGCATTATGTT...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR GCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCACCGTCAGTATTCTCTaGCCTTCCTGTAGTCCCGGA +
Preference number: 2 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPTVSIL*PSCSPG
Trigger: TCCGGGACTACAGGAAGGGCAGAGAATACTGACGGT...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR GCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGAAGTGTTCTGCATTGGTaGCCCCACAACATGTCCATC +
Preference number: 2 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRSVLHW*PHNMSI
Trigger: GATGGACATGTTGTGGGGGCACCAATGCAGAACACT...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR GCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCTCAGTGCAGTGTTCTaGATTGGTGCCCCCACAACA +
Preference number: 2 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGLSAVF*IGAPTT
Trigger: TGTTGTGGGGGCACCAATGCAGAACACTGCACTGAG...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR GCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGTGTTCTGCATTGGTaGCCCCACAACATGTCCATC +
Preference number: 2 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPSVLHW*PHNMSI
Trigger: GATGGACATGTTGTGGGGGCACCAATGCAGAACACT...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATACTCACAAGTCAGTCTaGGGCATTGCCTATAAGGCT +
Preference number: 2 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHTHKSV*GIAYKA
Trigger: AGCCTTATAGGCAATGCCCCAGACTGACTTGTGAGT...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTAACATAATGCTGTCCTaGAACCCAGAGACTCTGCCC +
Preference number: 2 (lower is better)
Translates to: NAETPIREGLGWRSVGETNIMLS*NPETLP
Trigger: GGGCAGAGTCTCTGGGTTTCAGGACAGCATTATGTT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGACTCACAAGTCAGTCTaGGGCATTGCCTATAAGGCT +
Preference number: 2 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGTHKSV*GIAYKA
Trigger: AGCCTTATAGGCAATGCCCCAGACTGACTTGTGAGT...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR GCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAACTTACACCCTCCTTaGTTATCACCTCATTCCCCA +
Preference number: 2 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPNLHPP*LSPHSP
Trigger: TGGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTT...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTACTCACAAGTCAGTCTaGGGCATTGCCTATAAGGCT +
Preference number: 2 (lower is better)
Translates to: NAETPIREGLGWRSVGETTHKSV*GIAYKA
Trigger: AGCCTTATAGGCAATGCCCCAGACTGACTTGTGAGT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR GCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAACCGTCAGTATTCTCTaGCCTTCCTGTAGTCCCGGA +
Preference number: 2 (lower is better)
Translates to: DRKINAETPIREGLGWRSTVSIL*PSCSPG
Trigger: TCCGGGACTACAGGAAGGGCAGAGAATACTGACGGT...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR GCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAAGTGTTCTGCATTGGTaGCCCCACAACATGTCCATC +
Preference number: 2 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTSVLHW*PHNMSI
Trigger: GATGGACATGTTGTGGGGGCACCAATGCAGAACACT...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR GCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCACTCAGTGCAGTGTTCTaGATTGGTGCCCCCACAACA +
Preference number: 2 (lower is better)
Translates to: DRKINAETPIREGLGWRSLSAVF*IGAPTT
Trigger: TGTTGTGGGGGCACCAATGCAGAACACTGCACTGAG...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTGCAGTGTTCTGCATTaGTGCCCCCACAACATGTCC +
Preference number: 2 (lower is better)
Translates to: KINAETPIREGLGWRSVGCSVLH*CPHNMS
Trigger: GGACATGTTGTGGGGGCACCAATGCAGAACACTGCA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAAACATAATGCTGTCCTaGAACCCAGAGACTCTGCCC +
Preference number: 2 (lower is better)
Translates to: DRKINAETPIREGLGWRSNIMLS*NPETLP
Trigger: GGGCAGAGTCTCTGGGTTTCAGGACAGCATTATGTT...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR GCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCACCGTCAGTATTCTCTaGCCTTCCTGTAGTCCCGGA +
Preference number: 2 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITTVSIL*PSCSPG
Trigger: TCCGGGACTACAGGAAGGGCAGAGAATACTGACGGT...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGAGTTTCAAGAACAGATaGAGGGTTAATACTGGTAAC +
Preference number: 2 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLSFKNR*RVNTGN
Trigger: GTTACCAGTATTAACCCTTCATCTGTTCTTGAAACT...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAATGGGGGCAAGGGTCCTaGGAACTCAGAGATGAGCCT +
Preference number: 2 (lower is better)
Translates to: TIIIILLFPLYPISNKVKWGQGS*ELRDEP
Trigger: AGGCTCATCTCTGAGTTCTCAGGACCCTTGCCCCCA...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAATGGGGTGGAGATCAGTaGGTGAGACTGCTGGCCAAA +
Preference number: 2 (lower is better)
Translates to: TIIIILLFPLYPISNKVKWGGDQ*VRLLAK
Trigger: TTTGGCCAGCAGTCTCACCCACTGATCTCCACCCCA...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTAGTTTCAAGAACAGATaGAGGGTTAATACTGGTAAC +
Preference number: 2 (lower is better)
Translates to: KINAETPIREGLGWRSVGSFKNR*RVNTGN
Trigger: GTTACCAGTATTAACCCTTCATCTGTTCTTGAAACT...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAGTGGAGATCAGTGGGTaGGACTGCTGGCCAAATAAA +
Preference number: 2 (lower is better)
Translates to: TIIIILLFPLYPISNKVKVEISG*DCWPNK
Trigger: TTTATTTGGCCAGCAGTCTCACCCACTGATCTCCAC...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR CAA 90 bp ACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCTTaGTCCCCTAAACTTACACCCTCCTTGCTTATCACCTCATTCCCC +
Preference number: 2 (lower is better)
Translates to: TFYRECLLVLFILSS*SPKLTPSLLITSFP
Trigger: GGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTTTAGGGGACAAAGAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCAGTTTCAAGAACAGATaGAGGGTTAATACTGGTAAC +
Preference number: 2 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITSFKNR*RVNTGN
Trigger: GTTACCAGTATTAACCCTTCATCTGTTCTTGAAACT...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAACAGGAAAATAAATGCTaGGACACCAATCAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: TIIIILLFPLYPISNKVKQENKC*DTNQGR
Trigger: CCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTG...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAAGTTTCAAGAACAGATaGAGGGTTAATACTGGTAAC +
Preference number: 2 (lower is better)
Translates to: TIIIILLFPLYPISNKVKSFKNR*RVNTGN
Trigger: GTTACCAGTATTAACCCTTCATCTGTTCTTGAAACT...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR TCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCAGTTTCAAGAACAGATaGAGGGTTAATACTGGTAAC +
Preference number: 2 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFSFKNR*RVNTGN
Trigger: GTTACCAGTATTAACCCTTCATCTGTTCTTGAAACT...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CAA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATAGTCAGTCTGGGGCATaGCCTATAAGGCTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHSQSGA*PIRLLS
Trigger: GGACAGGAGCCTTATAGGCAATGCCCCAGACTGACT...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CAA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGGTGCAGTGTTCTGCATaGGTGCCCCCACAACATGTC +
Preference number: 3 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGVQCSA*VPPQHV
Trigger: GACATGTTGTGGGGGCACCAATGCAGAACACTGCAC...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CAA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTAGTCAGTCTGGGGCATaGCCTATAAGGCTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: NAETPIREGLGWRSVGETSQSGA*PIRLLS
Trigger: GGACAGGAGCCTTATAGGCAATGCCCCAGACTGACT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CAA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGATAAAAATCCCCTCCTaGCGTGTCCACCCACAACCC +
Preference number: 3 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLIKIPS*RVHPQP
Trigger: GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTAT...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CAA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATAAACTTACACCCTCCTaGCTTATCACCTCATTCCCC +
Preference number: 3 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHKLTPS*LITSFP
Trigger: GGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTTT...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CAA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGAAAACTTACACCCTCCTaGCTTATCACCTCATTCCCC +
Preference number: 3 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRKLTPS*LITSFP
Trigger: GGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTTT...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CAA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAAGTCAGTCTGGGGCATaGCCTATAAGGCTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: DRKINAETPIREGLGWRSSQSGA*PIRLLS
Trigger: GGACAGGAGCCTTATAGGCAATGCCCCAGACTGACT...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CAA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCAAACTTACACCCTCCTaGCTTATCACCTCATTCCCC +
Preference number: 3 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITKLTPS*LITSFP
Trigger: GGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTTT...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CAA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAAGTCAGTCTGGGGCATaGCCTATAAGGCTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: TIIIILLFPLYPISNKVKSQSGA*PIRLLS
Trigger: GGACAGGAGCCTTATAGGCAATGCCCCAGACTGACT...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR TCA 72 bp TTATCACCTCATTCCCCAACCAGTTTCAAGAACAGATaGAGGGTTAATACTGGTAACCGTCAGTATTCTCTG +
Preference number: 3 (lower is better)
Translates to: LSPHSPTSFKNR*RVNTGNRQYSL
Trigger: CAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGGTTGGGGAATGAGGTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR-3UTR CAA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTAAACTTACACCCTCCTaGCTTATCACCTCATTCCCC +
Preference number: 3 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLKLTPS*LITSFP
Trigger: GGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTTT...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTCTGGGGCTTCGGACTaGGTCCGGCCAAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLSGASD*VRPRPA
Trigger: TGCAGGCCTTGGCCGGACCCAGTCCGAAGCCCCAGA...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR TCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATGTCCATGGCACCAGTTaGAGTGTGTTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHVHGTS*SVLARP
Trigger: GGGCCTGGCCAACACACTTCAACTGGTGCCATGGAC...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR CCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTAGGCTGTGGACCGGCTaGGCCATGTCGGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETRLWTG*AMSELG
Trigger: ACCCAGCTCCGACATGGCCCAGCCGGTCCACAGCCT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462446.6
CDS-3UTR GCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCCCCCCTCATGGTGGCTaGTGTAAGGGGTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPPPHGG*CKGSQS
Trigger: GCTCTGTGACCCCTTACAGCAGCCACCATGAGGGGG...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
58% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR CCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATAGACCGGGTAGGAATTaGGGCCACCCTCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHRPGRN*GHPHPL
Trigger: CAGAGGATGAGGGTGGCCCCAATTCCTACCCGGTCT...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTGGGGGCAAGGGTCCTaGGAACTCAGAGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLWGQGS*ELRDEP
Trigger: AGGCTCATCTCTGAGTTCTCAGGACCCTTGCCCCCA...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGAGACCGGGTAGGAATTaGGGCCACCCTCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLRPGRN*GHPHPL
Trigger: CAGAGGATGAGGGTGGCCCCAATTCCTACCCGGTCT...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTGGGGAAGGGATCTaGCCCATGCCAAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGRGEGI*PMPRFC
Trigger: GCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACG...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGAACTCCAAGATCACCGTaGGGAAGGGATCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRTPRSP*GRDLAH
Trigger: ATGGGCCAGATCCCTTCCCCACGGTGATCTTGGAGT...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTGGAAGAGCCAGGGCTaGGCGCCTACTCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLWKSQG*APTPRS
Trigger: TGATCTTGGAGTAGGCGCCCAGCCCTGGCTCTTCCA...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGATGGGGTGGAGATCAGTaGGTGAGACTGCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRWGGDQ*VRLLAK
Trigger: TTTGGCCAGCAGTCTCACCCACTGATCTCCACCCCA...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATCAATCAGGGAAGGTCTaGGGTGGAGATCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHQSGKV*GGDQWV
Trigger: CACCCACTGATCTCCACCCCAGACCTTCCCTGATTG...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCAAAGAGTAGCGCTGGCTaGCAGCCTCCCCCTCATGGT +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPKSSAG*QPPPHG
Trigger: ACCATGAGGGGGAGGCTGCCAGCCAGCGCTACTCTT...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR TCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATGGCCCATGCAGGGAATaGATCATTCTCTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHGPCRE*IILSHL
Trigger: CAGATGGGAGAGAATGATTCATTCCCTGCATGGGCC...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGAAAGGGATCTGGCCCATaGCAAGATTCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRKGSGP*QDSAAP
Trigger: TGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTT...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGATTGTACTGGGTGTTCTaGGTTAGTGTGCGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRLYWVF*VSVRRV
Trigger: GACACGCCGCACACTAACCCAGAACACCCAGTACAA...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTAGACCGGGTAGGAATTaGGGCCACCCTCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETRPGRN*GHPHPL
Trigger: CAGAGGATGAGGGTGGCCCCAATTCCTACCCGGTCT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACGTGGGGAAGGGATCTaGCCCATGCCAAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPRGEGI*PMPRFC
Trigger: GCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACG...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGACTCCAAGATCACCGTaGGGAAGGGATCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLTPRSP*GRDLAH
Trigger: ATGGGCCAGATCCCTTCCCCACGGTGATCTTGGAGT...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCATGGAAGAGCCAGGGCTaGGCGCCTACTCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPWKSQG*APTPRS
Trigger: TGATCTTGGAGTAGGCGCCCAGCCCTGGCTCTTCCA...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATTGTCAGGAGCTTGTCTaGGGCAACTGTTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHCQELV*GNCCSG
Trigger: TCCAGAACAACAGTTGCCTCAGACAAGCTCCTGACA...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATAACATAATGCTGTCCTaGAACCCAGAGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHNIMLS*NPETLP
Trigger: GGGCAGAGTCTCTGGGTTTCAGGACAGCATTATGTT...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAAGGGATCTGGCCCATaGCAAGATTCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPKGSGP*QDSAAP
Trigger: TGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTT...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGGGATCAACAGAGCGCTaGTTCCGGATCATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGGSTER*FRIIGS
Trigger: AGACCCAATGATCCGGAACCAGCGCTCTGTTGATCC...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCGGATCAACAGAGCGCTaGTTCCGGATCATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPGSTER*FRIIGS
Trigger: AGACCCAATGATCCGGAACCAGCGCTCTGTTGATCC...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGATCTCAGTGGTCAGTGTaGTGTTCCCCAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRSQWSV*CSPGFL
Trigger: CAGAAAACCTGGGGAACACCACACTGACCACTGAGA...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGTTGTACTGGGTGTTCTaGGTTAGTGTGCGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGLYWVF*VSVRRV
Trigger: GACACGCCGCACACTAACCCAGAACACCCAGTACAA...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTTGGGGTGGAGATCAGTaGGTGAGACTGCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETWGGDQ*VRLLAK
Trigger: TTTGGCCAGCAGTCTCACCCACTGATCTCCACCCCA...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTCAATCAGGGAAGGTCTaGGGTGGAGATCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETQSGKV*GGDQWV
Trigger: CACCCACTGATCTCCACCCCAGACCTTCCCTGATTG...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR CAA 72 bp GTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTaGCGTGTCCACCCACAACCCAGCAAGCCAAACCAA +
Preference number: 4 (lower is better)
Translates to: VGETAGQIKIPS*RVHPQPSKPNQ
Trigger: TTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATGTGAGGGGAAATATGTaGTCGGATGTTGAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHVRGNM*SDVESS
Trigger: GGAACTCTCAACATCCGATCACATATTTCCCCTCAC...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAAACAAGGCCTGGAGTaGGGGGAAATATGTGATCGG +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPKQGLE*GEICDR
Trigger: CCGATCACATATTTCCCCTCACTCCAGGCCTTGTTT...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGGCCCATGCAGGGAATaGATCATTCTCTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETGPCRE*IILSHL
Trigger: CAGATGGGAGAGAATGATTCATTCCCTGCATGGGCC...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGAACATAATGCTGTCCTaGAACCCAGAGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLNIMLS*NPETLP
Trigger: GGGCAGAGTCTCTGGGTTTCAGGACAGCATTATGTT...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACATGGGGGCAAGGGTCCTaGGAACTCAGAGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTWGQGS*ELRDEP
Trigger: AGGCTCATCTCTGAGTTCTCAGGACCCTTGCCCCCA...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCTGCTGCAGATGAGGTaGTCTTGTCATTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGLLQMR*SCHWVM
Trigger: CATCACCCAATGACAAGATCACCTCATCTGCAGCAG...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGGGTTTTCTCTGTGGTTaGCGTGGTCTTTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGGFLCG*RGLFWV
Trigger: CACCCAGAAAAGACCACGTCAACCACAGAGAAAACC...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGAAATGGCGTGTGGTGTTaGAGTGGCGTTTTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRNGVWC*SGVFAH
Trigger: ATGAGCAAAAACGCCACTGCAACACCACACGCCATT...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGGCCACCCTCATCCTCTaGATCATTGTACTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLATLIL*IIVLGV
Trigger: AACACCCAGTACAATGATGCAGAGGATGAGGGTGGC...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTACCGTCAGTATTCTCTaGCCTTCCTGTAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETTVSIL*PSCSPG
Trigger: TCCGGGACTACAGGAAGGGCAGAGAATACTGACGGT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTCTCAGTGCAGTGTTCTaGATTGGTGCCCCCACAACA +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETLSAVF*IGAPTT
Trigger: TGTTGTGGGGGCACCAATGCAGAACACTGCACTGAG...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCTCAGTTGGCTTAGAATaGCGTGTGGTGTTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPSVGLE*RVVLQW
Trigger: CCACTGCAACACCACACGCCATTCTAAGCCAACTGA...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGATGTAGGCTTGTCAGTTaGCTTAGAATGGCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRCRLVS*LRMACG
Trigger: ACCACACGCCATTCTAAGCCAACTGACAAGCCTACA...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGCTGGTTCCGGATCATTaGGTCTTTCCCTTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLLVPDH*VFPLVA
Trigger: AGCAACCAAGGGAAAGACCCAATGATCCGGAACCAG...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTCTCAGTGGTCAGTGTaGTGTTCCCCAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLSQWSV*CSPGFL
Trigger: CAGAAAACCTGGGGAACACCACACTGACCACTGAGA...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACTTTTATGGTCTCAGTaGTCAGTGTGGTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRLLWSQ*SVWCSP
Trigger: TGGGGAACACCACACTGACCACTGAGACCATAAAAG...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATTTACTGGGGCTTTTATaGTCTCAGTGGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHLLGLL*SQWSVW
Trigger: CCACACTGACCACTGAGACCATAAAAGCCCCAGTAA...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACCCATCTGTCCAGCGTaGATACCTTTCTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPPICPA*IPFCEP
Trigger: TGGCTCACAGAAAGGTATCCACGCTGGACAGATGGG...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACATGGAAGAGCCAGGGCTaGGCGCCTACTCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTWKSQG*APTPRS
Trigger: TGATCTTGGAGTAGGCGCCCAGCCCTGGCTCTTCCA...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTTGCAGTGTTCTGCATTaGTGCCCCCACAACATGTCC +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETCSVLH*CPHNMS
Trigger: GGACATGTTGTGGGGGCACCAATGCAGAACACTGCA...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCATGCAGTGTTCTGCATTaGTGCCCCCACAACATGTCC +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPCSVLH*CPHNMS
Trigger: GGACATGTTGTGGGGGCACCAATGCAGAACACTGCA...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCCAGCACAGTGTCCATaGCACCAGTTGAAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGPAQCP*HQLKCV
Trigger: AACACACTTCAACTGGTGCCATGGACACTGTGCTGG...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR TCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTTGTCAGGAGCTTGTCTaGGGCAACTGTTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETCQELV*GNCCSG
Trigger: TCCAGAACAACAGTTGCCTCAGACAAGCTCCTGACA...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTGGAGATCAGTGGGTaGGACTGCTGGCCAAATAAA +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETVEISG*DCWPNK
Trigger: TTTATTTGGCCAGCAGTCTCACCCACTGATCTCCAC...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGATGTGATCACATTGGCTaGTGTAGCCCTATCTCTATG +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRCDHIG*CSPISM
Trigger: CATAGAGATAGGGCTACATCAGCCAATGTGATCACA...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCAGGTTTTCTCTGTGGTTaGCGTGGTCTTTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPGFLCG*RGLFWV
Trigger: CACCCAGAAAAGACCACGTCAACCACAGAGAAAACC...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCACTCTGGGGCCTATTATaGGTCCCGGGAGAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSLWGLL*VPGEPV
Trigger: AACTGGCTCTCCCGGGACTCATAATAGGCCCCAGAG...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR GCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCAAGTGTTCTGCATTGGTaGCCCCACAACATGTCCATC +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPSVLHW*PHNMSI
Trigger: GATGGACATGTTGTGGGGGCACCAATGCAGAACACT...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTTCAGTTGGCTTAGAATaGCGTGTGGTGTTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETSVGLE*RVVLQW
Trigger: CCACTGCAACACCACACGCCATTCTAAGCCAACTGA...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGTGTAGGCTTGTCAGTTaGCTTAGAATGGCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGCRLVS*LRMACG
Trigger: ACCACACGCCATTCTAAGCCAACTGACAAGCCTACA...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACTGGTTCCGGATCATTaGGTCTTTCCCTTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPLVPDH*VFPLVA
Trigger: AGCAACCAAGGGAAAGACCCAATGATCCGGAACCAG...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCATCTCAGTGGTCAGTGTaGTGTTCCCCAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPSQWSV*CSPGFL
Trigger: CAGAAAACCTGGGGAACACCACACTGACCACTGAGA...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCCTTTTATGGTCTCAGTaGTCAGTGTGGTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPLLWSQ*SVWCSP
Trigger: TGGGGAACACCACACTGACCACTGAGACCATAAAAG...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAAGACCGGGTAGGAATTaGGGCCACCCTCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSRPGRN*GHPHPL
Trigger: CAGAGGATGAGGGTGGCCCCAATTCCTACCCGGTCT...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTAGACCGGGTAGGAATTaGGGCCACCCTCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGRPGRN*GHPHPL
Trigger: CAGAGGATGAGGGTGGCCCCAATTCCTACCCGGTCT...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTCGTGGGGAAGGGATCTaGCCCATGCCAAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGRGEGI*PMPRFC
Trigger: GCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACG...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACACAATCAGGGAAGGTCTaGGGTGGAGATCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTQSGKV*GGDQWV
Trigger: CACCCACTGATCTCCACCCCAGACCTTCCCTGATTG...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATTTTTATAGGCTCTGCTaGGGCTGGTGTGATCACATT +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHFYRLC*GWCDHI
Trigger: AATGTGATCACACCAGCCCCAGCAGAGCCTATAAAA...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCGAGACAGAGTCCTTCTaGGGCTTCGGACTGGGTCCG +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITETESF*GFGLGP
Trigger: CGGACCCAGTCCGAAGCCCCAGAAGGACTCTGTCTC...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR TCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTGAGGGGAAATATGTaGTCGGATGTTGAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETVRGNM*SDVESS
Trigger: GGAACTCTCAACATCCGATCACATATTTCCCCTCAC...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGTGGAGGTCTTTGTCCTaGATGCAGAACAATGTGATC +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGWRSLS*MQNNVI
Trigger: GATCACATTGTTCTGCATTCAGGACAAAGACCTCCA...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACTGCTAGAGATTGTGTaGGCTCATTGGCTGATATGG +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPLLEIV*AHWLIW
Trigger: CCATATCAGCCAATGAGCTCACACAATCTCTAGCAG...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGGTTTCCTGTGGCTTCTaGTGTGATAGAACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLVSCGF*CDRTQL
Trigger: AAGCTGAGTTCTATCACATCAGAAGCCACAGGAAAC...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGAGTGGATACCTTTCTGTaGGCCATCTTTATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRVDTFL*AIFIEV
Trigger: TACCTCAATAAAGATGGCTCACAGAAAGGTATCCAC...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCCAGGAAAATAAATGCTaGGACACCAATCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPQENKC*DTNQGR
Trigger: CCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTG...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGCAGGAAAATAAATGCTaGGACACCAATCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLQENKC*DTNQGR
Trigger: CCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTG...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGTGTGATCACATTGGCTaGTGTAGCCCTATCTCTATG +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGCDHIG*CSPISM
Trigger: CATAGAGATAGGGCTACATCAGCCAATGTGATCACA...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACTGTGGACTTTTCTGTaGCTTGTGTCATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRLWTFL*LVSSSH
Trigger: ATGAGAAGATGACACAAGTCACAGAAAAGTCCACAG...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAACCGTCAGTATTCTCTaGCCTTCCTGTAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTTVSIL*PSCSPG
Trigger: TCCGGGACTACAGGAAGGGCAGAGAATACTGACGGT...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGAACTTACACCCTCCTTaGTTATCACCTCATTCCCCA +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLNLHPP*LSPHSP
Trigger: TGGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTT...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCATTACTGGGGCTTTTATaGTCTCAGTGGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPLLGLL*SQWSVW
Trigger: CCACACTGACCACTGAGACCATAAAAGCCCCAGTAA...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACATTGTACTGGGTGTTCTaGGTTAGTGTGCGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTLYWVF*VSVRRV
Trigger: GACACGCCGCACACTAACCCAGAACACCCAGTACAA...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGTCTGCATCATTGTACTaGGTGTTCTGGGTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGSASLY*VFWVSV
Trigger: CACACTAACCCAGAACACCCAGTACAATGATGCAGA...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCTCTGCATCATTGTACTaGGTGTTCTGGGTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPSASLY*VFWVSV
Trigger: CACACTAACCCAGAACACCCAGTACAATGATGCAGA...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTACTCCAAGATCACCGTaGGGAAGGGATCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGTPRSP*GRDLAH
Trigger: ATGGGCCAGATCCCTTCCCCACGGTGATCTTGGAGT...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTGGGGTGGAGATCAGTaGGTGAGACTGCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGWGGDQ*VRLLAK
Trigger: TTTGGCCAGCAGTCTCACCCACTGATCTCCACCCCA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCATGGGGTGGAGATCAGTaGGTGAGACTGCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSWGGDQ*VRLLAK
Trigger: TTTGGCCAGCAGTCTCACCCACTGATCTCCACCCCA...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTCAATCAGGGAAGGTCTaGGGTGGAGATCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGQSGKV*GGDQWV
Trigger: CACCCACTGATCTCCACCCCAGACCTTCCCTGATTG...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGTTTTATAGGCTCTGCTaGGGCTGGTGTGATCACATT +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGFYRLC*GWCDHI
Trigger: AATGTGATCACACCAGCCCCAGCAGAGCCTATAAAA...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTCCCTTTGGTGCATATaGTCTTCTCTGAGTATAGCG +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLSLWCI*SSLSIA
Trigger: CGCTATACTCAGAGAAGACCATATGCACCAAAGGGA...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGTCCCTTTGGTGCATATaGTCTTCTCTGAGTATAGCG +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGSLWCI*SSLSIA
Trigger: CGCTATACTCAGAGAAGACCATATGCACCAAAGGGA...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAGCGGAGCAGAGGCTGTaGACCGGCTGGGCCATGTCG +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKAEQRL*TGWAMS
Trigger: CGACATGGCCCAGCCGGTCCACAGCCTCTGCTCCGC...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462446.6
CDS-3UTR TCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATTTTTCTTGTTACCGTTaGTTTGCCTGTTGTGGACTT +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHFSCYR*FACCGL
Trigger: AAGTCCACAACAGGCAAATCAACGGTAACAAGAAAA...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTGTGAGCTCATTGGCTaGTATGGTCTCTTGTATGTT +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLCELIG*YGLLYV
Trigger: AACATACAAGAGACCATATCAGCCAATGAGCTCACA...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGATCCTGTGACCTTGACTaGAGGTTTTATAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRSCDLD*RFYSLC
Trigger: ACAAAGACTATAAAACCTTCAGTCAAGGTCACAGGA...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCAGTTTCCTGTGGCTTCTaGTGTGATAGAACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPVSCGF*CDRTQL
Trigger: AAGCTGAGTTCTATCACATCAGAAGCCACAGGAAAC...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTTTCCTGTGGCTTCTaGTGTGATAGAACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETVSCGF*CDRTQL
Trigger: AAGCTGAGTTCTATCACATCAGAAGCCACAGGAAAC...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGGCCCATGCAGGGAATaGATCATTCTCTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGGPCRE*IILSHL
Trigger: CAGATGGGAGAGAATGATTCATTCCCTGCATGGGCC...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTCAGGAAAATAAATGCTaGGACACCAATCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETQENKC*DTNQGR
Trigger: CCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTG...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACACTGCTGCAGATGAGGTaGTCTTGTCATTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTLLQMR*SCHWVM
Trigger: CATCACCCAATGACAAGATCACCTCATCTGCAGCAG...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTTGTGATCACATTGGCTaGTGTAGCCCTATCTCTATG +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETCDHIG*CSPISM
Trigger: CATAGAGATAGGGCTACATCAGCCAATGTGATCACA...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGCTGTGGACTTTTCTGTaGCTTGTGTCATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLLWTFL*LVSSSH
Trigger: ATGAGAAGATGACACAAGTCACAGAAAAGTCCACAG...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCTTGTTACCGTTGATTTaGCTGTTGTGGACTTACGAC +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPLLPLI*LLWTYD
Trigger: GTCGTAAGTCCACAACAGGCAAATCAACGGTAACAA...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGTTGTTACCGTTGATTTaGCTGTTGTGGACTTACGAC +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGLLPLI*LLWTYD
Trigger: GTCGTAAGTCCACAACAGGCAAATCAACGGTAACAA...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGCCACCCTCATCCTCTaGATCATTGTACTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTATLIL*IIVLGV
Trigger: AACACCCAGTACAATGATGCAGAGGATGAGGGTGGC...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCAAACTTACACCCTCCTTaGTTATCACCTCATTCCCCA +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPNLHPP*LSPHSP
Trigger: TGGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTT...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGATTGGGTCTTTCCCTTaGTTGCTGGAGTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGIGSFP*LLEFSS
Trigger: TGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAAT...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATGAATTGCCTGAGTTGTaGAAGGAAGTTGTAGTCTTA +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHELPEL*KEVVVL
Trigger: TAAGACTACAACTTCCTTCCACAACTCAGGCAATTC...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGAGAATTGCCTGAGTTGTaGAAGGAAGTTGTAGTCTTA +
Preference number: 4 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRELPEL*KEVVVL
Trigger: TAAGACTACAACTTCCTTCCACAACTCAGGCAATTC...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACATCTCAGTGGTCAGTGTaGTGTTCCCCAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTSQWSV*CSPGFL
Trigger: CAGAAAACCTGGGGAACACCACACTGACCACTGAGA...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCACCCATCTGTCCAGCGTaGATACCTTTCTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSPICPA*IPFCEP
Trigger: TGGCTCACAGAAAGGTATCCACGCTGGACAGATGGG...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTTGTACTGGGTGTTCTaGGTTAGTGTGCGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGLYWVF*VSVRRV
Trigger: GACACGCCGCACACTAACCCAGAACACCCAGTACAA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCATCTGCATCATTGTACTaGGTGTTCTGGGTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPSASLY*VFWVSV
Trigger: CACACTAACCCAGAACACCCAGTACAATGATGCAGA...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATAGACCGGGTAGGAATTaGGGCCACCCTCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNRPGRN*GHPHPL
Trigger: CAGAGGATGAGGGTGGCCCCAATTCCTACCCGGTCT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAGACCGGGTAGGAATTaGGGCCACCCTCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRRPGRN*GHPHPL
Trigger: CAGAGGATGAGGGTGGCCCCAATTCCTACCCGGTCT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATCGTGGGGAAGGGATCTaGCCCATGCCAAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNRGEGI*PMPRFC
Trigger: GCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACG...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGACGTGGGGAAGGGATCTaGCCCATGCCAAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRRGEGI*PMPRFC
Trigger: GCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACG...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATGGAAGAGCCAGGGCTaGGCGCCTACTCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRWKSQG*APTPRS
Trigger: TGATCTTGGAGTAGGCGCCCAGCCCTGGCTCTTCCA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTTTTTATAGGCTCTGCTaGGGCTGGTGTGATCACATT +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETFYRLC*GWCDHI
Trigger: AATGTGATCACACCAGCCCCAGCAGAGCCTATAAAA...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTGTCAGGAGCTTGTCTaGGGCAACTGTTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGCQELV*GNCCSG
Trigger: TCCAGAACAACAGTTGCCTCAGACAAGCTCCTGACA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCATGTGAGCTCATTGGCTaGTATGGTCTCTTGTATGTT +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPCELIG*YGLLYV
Trigger: AACATACAAGAGACCATATCAGCCAATGAGCTCACA...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCTCCTGTGACCTTGACTaGAGGTTTTATAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPSCDLD*RFYSLC
Trigger: ACAAAGACTATAAAACCTTCAGTCAAGGTCACAGGA...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATAGTTTCAAGAACAGATaGAGGGTTAATACTGGTAAC +
Preference number: 4 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHSFKNR*RVNTGN
Trigger: GTTACCAGTATTAACCCTTCATCTGTTCTTGAAACT...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCTGGGGGCAAGGGTCCTaGGAACTCAGAGATGAGCCT +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCWGQGS*ELRDEP
Trigger: AGGCTCATCTCTGAGTTCTCAGGACCCTTGCCCCCA...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCATGTTCTGGGTTAGTGTaGGGCGTGTCCGCATCATAT +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSCSGLV*GVSASY
Trigger: ATATGATGCGGACACGCCGCACACTAACCCAGAACA...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGCCACCCTCATCCTCTaGATCATTGTACTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSATLIL*IIVLGV
Trigger: AACACCCAGTACAATGATGCAGAGGATGAGGGTGGC...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCAAGGGATCTGGCCCATaGCAAGATTCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITKGSGP*QDSAAP
Trigger: TGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTT...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACACGTGTGGTGTTGCAGTaGCGTTTTTGCTCATGGATT +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTRVVLQ*RFCSWI
Trigger: AATCCATGAGCAAAAACGCCACTGCAACACCACACG...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGAGTTTTCTTCAGAAGTaGGAGGAGCCTCATGATTAT +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGSFLQK*EEPHDY
Trigger: ATAATCATGAGGCTCCTCCCACTTCTGAAGAAAACT...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTATTGGGTCTTTCCCTTaGTTGCTGGAGTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETIGSFP*LLEFSS
Trigger: TGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAAT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCGAATTGCCTGAGTTGTaGAAGGAAGTTGTAGTCTTA +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPELPEL*KEVVVL
Trigger: TAAGACTACAACTTCCTTCCACAACTCAGGCAATTC...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGGTGTGTTTTTCCCTTTaGTGCATATGGTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGVCFSL*CIWSSC
Trigger: ACAAGAAGACCATATGCACCAAAGGGAAAAACACAC...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000304311.3
CDS-3UTR CCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTCTCAGTGGTCAGTGTaGTGTTCCCCAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGSQWSV*CSPGFL
Trigger: CAGAAAACCTGGGGAACACCACACTGACCACTGAGA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACACTTTTATGGTCTCAGTaGTCAGTGTGGTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTLLWSQ*SVWCSP
Trigger: TGGGGAACACCACACTGACCACTGAGACCATAAAAG...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCCGTGGGGAAGGGATCTaGCCCATGCCAAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCRGEGI*PMPRFC
Trigger: GCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACG...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAACTCCAAGATCACCGTaGGGAAGGGATCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRTPRSP*GRDLAH
Trigger: ATGGGCCAGATCCCTTCCCCACGGTGATCTTGGAGT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATACTCCAAGATCACCGTaGGGAAGGGATCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNTPRSP*GRDLAH
Trigger: ATGGGCCAGATCCCTTCCCCACGGTGATCTTGGAGT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCTGGAAGAGCCAGGGCTaGGCGCCTACTCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCWKSQG*APTPRS
Trigger: TGATCTTGGAGTAGGCGCCCAGCCCTGGCTCTTCCA...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTGGGGTGGAGATCAGTaGGTGAGACTGCTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNWGGDQ*VRLLAK
Trigger: TTTGGCCAGCAGTCTCACCCACTGATCTCCACCCCA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATCAATCAGGGAAGGTCTaGGGTGGAGATCAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNQSGKV*GGDQWV
Trigger: CACCCACTGATCTCCACCCCAGACCTTCCCTGATTG...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGTTCCCCAGTTTTCTaGTATTCTTGGAATGTAGTA +
Preference number: 4 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPSSPVF*YSWNVV
Trigger: TACTACATTCCAAGAATATCAGAAAACTGGGGAACT...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACATATGTGATCGGATGTTaGGAGTTCCCCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTYVIGC*EFPSFL
Trigger: CAGAAAACTGGGGAACTCTCAACATCCGATCACATA...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCAAGTTGTAGTCTTATGTaGGCTGGTACTTGTCTTATC +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPSCSLM*AGTCLI
Trigger: GATAAGACAAGTACCAGCTCACATAAGACTACAACT...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCACTGCTAGAGATTGTGTaGGCTCATTGGCTGATATGG +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSLLEIV*AHWLIW
Trigger: CCATATCAGCCAATGAGCTCACACAATCTCTAGCAG...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGTTTCCTGTGGCTTCTaGTGTGATAGAACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTVSCGF*CDRTQL
Trigger: AAGCTGAGTTCTATCACATCAGAAGCCACAGGAAAC...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGGCCCATGCAGGGAATaGATCATTCTCTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRGPCRE*IILSHL
Trigger: CAGATGGGAGAGAATGATTCATTCCCTGCATGGGCC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGGCCCATGCAGGGAATaGATCATTCTCTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNGPCRE*IILSHL
Trigger: CAGATGGGAGAGAATGATTCATTCCCTGCATGGGCC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACACAGGAAAATAAATGCTaGGACACCAATCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTQENKC*DTNQGR
Trigger: CCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTG...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCAGACTCTGCTGCAGATaGGGTGATCTTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITRLCCR*GDLVIG
Trigger: CCCAATGACAAGATCACCTCATCTGCAGCAGAGTCT...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCTGTTCTGGGTTAGTGTaGGGCGTGTCCGCATCATAT +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITCSGLV*GVSASY
Trigger: ATATGATGCGGACACGCCGCACACTAACCCAGAACA...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCGCCACCCTCATCCTCTaGATCATTGTACTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITATLIL*IIVLGV
Trigger: AACACCCAGTACAATGATGCAGAGGATGAGGGTGGC...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATAAGGGATCTGGCCCATaGCAAGATTCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNKGSGP*QDSAAP
Trigger: TGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAAGGGATCTGGCCCATaGCAAGATTCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRKGSGP*QDSAAP
Trigger: TGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAACCGTCAGTATTCTCTaGCCTTCCTGTAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRTVSIL*PSCSPG
Trigger: TCCGGGACTACAGGAAGGGCAGAGAATACTGACGGT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATACCGTCAGTATTCTCTaGCCTTCCTGTAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNTVSIL*PSCSPG
Trigger: TCCGGGACTACAGGAAGGGCAGAGAATACTGACGGT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCAGTGTTCTGCATTGGTaGCCCCACAACATGTCCATC +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITSVLHW*PHNMSI
Trigger: GATGGACATGTTGTGGGGGCACCAATGCAGAACACT...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATCTCAGTGCAGTGTTCTaGATTGGTGCCCCCACAACA +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLSAVF*IGAPTT
Trigger: TGTTGTGGGGGCACCAATGCAGAACACTGCACTGAG...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACACACACAGATGAAATaGCTACAAGGAGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPHTQMK*LQGGKL
Trigger: AAGTTTTCCTCCTTGTAGGCATTTCATCTGTGTGTG...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTAGTTTTCTTCAGAAGTaGGAGGAGCCTCATGATTAT +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETSFLQK*EEPHDY
Trigger: ATAATCATGAGGCTCCTCCCACTTCTGAAGAAAACT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGGATCAACAGAGCGCTaGTTCCGGATCATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRGSTER*FRIIGS
Trigger: AGACCCAATGATCCGGAACCAGCGCTCTGTTGATCC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGGATCAACAGAGCGCTaGTTCCGGATCATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNGSTER*FRIIGS
Trigger: AGACCCAATGATCCGGAACCAGCGCTCTGTTGATCC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCACTTTTATGGTCTCAGTaGTCAGTGTGGTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSLLWSQ*SVWCSP
Trigger: TGGGGAACACCACACTGACCACTGAGACCATAAAAG...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGACCCATCTGTCCAGCGTaGATACCTTTCTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRPICPA*IPFCEP
Trigger: TGGCTCACAGAAAGGTATCCACGCTGGACAGATGGG...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATCCCATCTGTCCAGCGTaGATACCTTTCTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNPICPA*IPFCEP
Trigger: TGGCTCACAGAAAGGTATCCACGCTGGACAGATGGG...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTTGTACTGGGTGTTCTaGGTTAGTGTGCGGCGTGTC +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLYWVF*VSVRRV
Trigger: GACACGCCGCACACTAACCCAGAACACCCAGTACAA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCACTCCAAGATCACCGTaGGGAAGGGATCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCTPRSP*GRDLAH
Trigger: ATGGGCCAGATCCCTTCCCCACGGTGATCTTGGAGT...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACATTTCTGGGGTTCTTGTaGTTTTCTCTGTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTFLGFL*FSLWLT
Trigger: CGTCAACCACAGAGAAAACCACAAGAACCCCAGAAA...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCATCTCCCTCCGGAACTaGCAGGCCTTCTTGATACCG +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCISLRN*QAFLIP
Trigger: CGGTATCAAGAAGGCCTGCCAGTTCCGGAGGGAGAT...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR TCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTATGTGATCGGATGTTaGGAGTTCCCCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGYVIGC*EFPSFL
Trigger: CAGAAAACTGGGGAACTCTCAACATCCGATCACATA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCGTGAGGGGAAATATGTaGTCGGATGTTGAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITVRGNM*SDVESS
Trigger: GGAACTCTCAACATCCGATCACATATTTCCCCTCAC...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATAAACAAGGCCTGGAGTaGGGGGAAATATGTGATCGG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNKQGLE*GEICDR
Trigger: CCGATCACATATTTCCCCTCACTCCAGGCCTTGTTT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAAACAAGGCCTGGAGTaGGGGGAAATATGTGATCGG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRKQGLE*GEICDR
Trigger: CCGATCACATATTTCCCCTCACTCCAGGCCTTGTTT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCATGGAGGTCTTTGTCCTaGATGCAGAACAATGTGATC +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSWRSLS*MQNNVI
Trigger: GATCACATTGTTCTGCATTCAGGACAAAGACCTCCA...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCGTGGGAGGAGCCTCATaGTTATCTGTAGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITVGGAS*LSVELL
Trigger: CAAAAGCTCTACAGATAATCATGAGGCTCCTCCCAC...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATGTCAGGAGCTTGTCTaGGGCAACTGTTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRCQELV*GNCCSG
Trigger: TCCAGAACAACAGTTGCCTCAGACAAGCTCCTGACA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTGTCAGGAGCTTGTCTaGGGCAACTGTTGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNCQELV*GNCCSG
Trigger: TCCAGAACAACAGTTGCCTCAGACAAGCTCCTGACA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGTTTCCTGTGGCTTCTaGTGTGATAGAACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGVSCGF*CDRTQL
Trigger: AAGCTGAGTTCTATCACATCAGAAGCCACAGGAAAC...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAACATAATGCTGTCCTaGAACCCAGAGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRNIMLS*NPETLP
Trigger: GGGCAGAGTCTCTGGGTTTCAGGACAGCATTATGTT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGTGGAGATCAGTGGGTaGGACTGCTGGCCAAATAAA +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNVEISG*DCWPNK
Trigger: TTTATTTGGCCAGCAGTCTCACCCACTGATCTCCAC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGTGGAGATCAGTGGGTaGGACTGCTGGCCAAATAAA +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRVEISG*DCWPNK
Trigger: TTTATTTGGCCAGCAGTCTCACCCACTGATCTCCAC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGACTGCTGCAGATGAGGTaGTCTTGTCATTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRLLQMR*SCHWVM
Trigger: CATCACCCAATGACAAGATCACCTCATCTGCAGCAG...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATAGACTCTGCTGCAGATaGGGTGATCTTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNRLCCR*GDLVIG
Trigger: CCCAATGACAAGATCACCTCATCTGCAGCAGAGTCT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAGACTCTGCTGCAGATaGGGTGATCTTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRRLCCR*GDLVIG
Trigger: CCCAATGACAAGATCACCTCATCTGCAGCAGAGTCT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGGTTTTCTCTGTGGTTaGCGTGGTCTTTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNGFLCG*RGLFWV
Trigger: CACCCAGAAAAGACCACGTCAACCACAGAGAAAACC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTGTTCTGGGTTAGTGTaGGGCGTGTCCGCATCATAT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNCSGLV*GVSASY
Trigger: ATATGATGCGGACACGCCGCACACTAACCCAGAACA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATGTTCTGGGTTAGTGTaGGGCGTGTCCGCATCATAT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRCSGLV*GVSASY
Trigger: ATATGATGCGGACACGCCGCACACTAACCCAGAACA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGCCACCCTCATCCTCTaGATCATTGTACTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNATLIL*IIVLGV
Trigger: AACACCCAGTACAATGATGCAGAGGATGAGGGTGGC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGCCACCCTCATCCTCTaGATCATTGTACTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRATLIL*IIVLGV
Trigger: AACACCCAGTACAATGATGCAGAGGATGAGGGTGGC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAAACTTACACCCTCCTTaGTTATCACCTCATTCCCCA +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSNLHPP*LSPHSP
Trigger: TGGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTT...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAGTGTTCTGCATTGGTaGCCCCACAACATGTCCATC +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSVLHW*PHNMSI
Trigger: GATGGACATGTTGTGGGGGCACCAATGCAGAACACT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCCTCAGTGCAGTGTTCTaGATTGGTGCCCCCACAACA +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCLSAVF*IGAPTT
Trigger: TGTTGTGGGGGCACCAATGCAGAACACTGCACTGAG...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAACTATAAACAAGGCCTaGAGTGAGGGGAAATATGTG +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTTINKA*SEGKYV
Trigger: CACATATTTCCCCTCACTCCAGGCCTTGTTTATAGT...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTCAGTTGGCTTAGAATaGCGTGTGGTGTTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNSVGLE*RVVLQW
Trigger: CCACTGCAACACCACACGCCATTCTAAGCCAACTGA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATCAGTTGGCTTAGAATaGCGTGTGGTGTTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSVGLE*RVVLQW
Trigger: CCACTGCAACACCACACGCCATTCTAAGCCAACTGA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATCTGGTTCCGGATCATTaGGTCTTTCCCTTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLVPDH*VFPLVA
Trigger: AGCAACCAAGGGAAAGACCCAATGATCCGGAACCAG...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCATATCCAAAGTACTCATaGACTTTTCCAAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPYPKYS*TFPKVF
Trigger: GAAGACCTTTGGAAAAGTCCATGAGTACTTTGGATA...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTTATCCAAAGTACTCATaGACTTTTCCAAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: NAETPIREGLGWRSVGETYPKYS*TFPKVF
Trigger: GAAGACCTTTGGAAAAGTCCATGAGTACTTTGGATA...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTCTCAGTGGTCAGTGTaGTGTTCCCCAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNSQWSV*CSPGFL
Trigger: CAGAAAACCTGGGGAACACCACACTGACCACTGAGA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATCTCAGTGGTCAGTGTaGTGTTCCCCAGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSQWSV*CSPGFL
Trigger: CAGAAAACCTGGGGAACACCACACTGACCACTGAGA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCCTTTTATGGTCTCAGTaGTCAGTGTGGTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITLLWSQ*SVWCSP
Trigger: TGGGGAACACCACACTGACCACTGAGACCATAAAAG...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCATCTGCATCATTGTACTaGGTGTTCTGGGTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSSASLY*VFWVSV
Trigger: CACACTAACCCAGAACACCCAGTACAATGATGCAGA...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTCTGCATCATTGTACTaGGTGTTCTGGGTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGSASLY*VFWVSV
Trigger: CACACTAACCCAGAACACCCAGTACAATGATGCAGA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAACGTGGGGAAGGGATCTaGCCCATGCCAAGATTCTGC +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKRGEGI*PMPRFC
Trigger: GCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACG...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTTTTATAGGCTCTGCTaGGGCTGGTGTGATCACATT +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGFYRLC*GWCDHI
Trigger: AATGTGATCACACCAGCCCCAGCAGAGCCTATAAAA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTTTCTGGGGTTCTTGTaGTTTTCTCTGTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGFLGFL*FSLWLT
Trigger: CGTCAACCACAGAGAAAACCACAAGAACCCCAGAAA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGTGAGGGGAAATATGTaGTCGGATGTTGAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRVRGNM*SDVESS
Trigger: GGAACTCTCAACATCCGATCACATATTTCCCCTCAC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGTGAGGGGAAATATGTaGTCGGATGTTGAGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNVRGNM*SDVESS
Trigger: GGAACTCTCAACATCCGATCACATATTTCCCCTCAC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCAAACAAGGCCTGGAGTaGGGGGAAATATGTGATCGG +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCKQGLE*GEICDR
Trigger: CCGATCACATATTTCCCCTCACTCCAGGCCTTGTTT...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGTGGGAGGAGCCTCATaGTTATCTGTAGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNVGGAS*LSVELL
Trigger: CAAAAGCTCTACAGATAATCATGAGGCTCCTCCCAC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGTGGGAGGAGCCTCATaGTTATCTGTAGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRVGGAS*LSVELL
Trigger: CAAAAGCTCTACAGATAATCATGAGGCTCCTCCCAC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAAGTTGTAGTCTTATGTaGGCTGGTACTTGTCTTATC +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTSCSLM*AGTCLI
Trigger: GATAAGACAAGTACCAGCTCACATAAGACTACAACT...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATCTGCTAGAGATTGTGTaGGCTCATTGGCTGATATGG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLLEIV*AHWLIW
Trigger: CCATATCAGCCAATGAGCTCACACAATCTCTAGCAG...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCGTTTCCTGTGGCTTCTaGTGTGATAGAACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITVSCGF*CDRTQL
Trigger: AAGCTGAGTTCTATCACATCAGAAGCCACAGGAAAC...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGTGGATACCTTTCTGTaGGCCATCTTTATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGVDTFL*AIFIEV
Trigger: TACCTCAATAAAGATGGCTCACAGAAAGGTATCCAC...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCAACATAATGCTGTCCTaGAACCCAGAGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCNIMLS*NPETLP
Trigger: GGGCAGAGTCTCTGGGTTTCAGGACAGCATTATGTT...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCCAGGAAAATAAATGCTaGGACACCAATCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITQENKC*DTNQGR
Trigger: CCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTG...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCAGACTCTGCTGCAGATaGGGTGATCTTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCRLCCR*GDLVIG
Trigger: CCCAATGACAAGATCACCTCATCTGCAGCAGAGTCT...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACATTGCAGTGGCGTTTTTaGTCATGGATTTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTLQWRF*SWISVD
Trigger: ATCTACAGAAATCCATGAGCAAAAACGCCACTGCAA...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCATTGTTACCGTTGATTTaGCTGTTGTGGACTTACGAC +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSLLPLI*LLWTYD
Trigger: GTCGTAAGTCCACAACAGGCAAATCAACGGTAACAA...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGCTTGGTCTGTGAATTaGCTGAGTTGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRAWSVN*LSCGRK
Trigger: CTTCCTTCCACAACTCAGGCAATTCACAGACCAAGC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGCTTGGTCTGTGAATTaGCTGAGTTGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNAWSVN*LSCGRK
Trigger: CTTCCTTCCACAACTCAGGCAATTCACAGACCAAGC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACACACACACAGATGAAATaGCTACAAGGAGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTHTQMK*LQGGKL
Trigger: AAGTTTTCCTCCTTGTAGGCATTTCATCTGTGTGTG...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAACTATAAACAAGGCCTaGAGTGAGGGGAAATATGTG +
Preference number: 4 (lower is better)
Translates to: DRKINAETPIREGLGWRSTINKA*SEGKYV
Trigger: CACATATTTCCCCTCACTCCAGGCCTTGTTTATAGT...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTGTAGGCTTGTCAGTTaGCTTAGAATGGCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNCRLVS*LRMACG
Trigger: ACCACACGCCATTCTAAGCCAACTGACAAGCCTACA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATGTAGGCTTGTCAGTTaGCTTAGAATGGCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRCRLVS*LRMACG
Trigger: ACCACACGCCATTCTAAGCCAACTGACAAGCCTACA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCATTGATTTGCCTGTTGTaGACTTACGACAGTTTATTT +
Preference number: 4 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPLICLL*TYDSLF
Trigger: AAATAAACTGTCGTAAGTCCACAACAGGCAAATCAA...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGACTTTTATGGTCTCAGTaGTCAGTGTGGTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRLLWSQ*SVWCSP
Trigger: TGGGGAACACCACACTGACCACTGAGACCATAAAAG...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTTACTGGGGCTTTTATaGTCTCAGTGGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLLGLL*SQWSVW
Trigger: CCACACTGACCACTGAGACCATAAAAGCCCCAGTAA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATTACTGGGGCTTTTATaGTCTCAGTGGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRLLGLL*SQWSVW
Trigger: CCACACTGACCACTGAGACCATAAAAGCCCCAGTAA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCTGGAAGAGCCAGGGCTaGGCGCCTACTCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFWKSQG*APTPRS
Trigger: TGATCTTGGAGTAGGCGCCCAGCCCTGGCTCTTCCA...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATACTCACAAGTCAGTCTaGGGCATTGCCTATAAGGCT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNTHKSV*GIAYKA
Trigger: AGCCTTATAGGCAATGCCCCAGACTGACTTGTGAGT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATATGTGATCGGATGTTaGGAGTTCCCCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRYVIGC*EFPSFL
Trigger: CAGAAAACTGGGGAACTCTCAACATCCGATCACATA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTGGAGGTCTTTGTCCTaGATGCAGAACAATGTGATC +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNWRSLS*MQNNVI
Trigger: GATCACATTGTTCTGCATTCAGGACAAAGACCTCCA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATGGAGGTCTTTGTCCTaGATGCAGAACAATGTGATC +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRWRSLS*MQNNVI
Trigger: GATCACATTGTTCTGCATTCAGGACAAAGACCTCCA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGTTTCCTGTGGCTTCTaGTGTGATAGAACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRVSCGF*CDRTQL
Trigger: AAGCTGAGTTCTATCACATCAGAAGCCACAGGAAAC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGTTTCCTGTGGCTTCTaGTGTGATAGAACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNVSCGF*CDRTQL
Trigger: AAGCTGAGTTCTATCACATCAGAAGCCACAGGAAAC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCGTGGATACCTTTCTGTaGGCCATCTTTATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITVDTFL*AIFIEV
Trigger: TACCTCAATAAAGATGGCTCACAGAAAGGTATCCAC...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAGGCCCATGCAGGGAATaGATCATTCTCTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKGPCRE*IILSHL
Trigger: CAGATGGGAGAGAATGATTCATTCCCTGCATGGGCC...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAAGTTTCAAGAACAGATaGAGGGTTAATACTGGTAAC +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTSFKNR*RVNTGN
Trigger: GTTACCAGTATTAACCCTTCATCTGTTCTTGAAACT...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCCTGTGGACTTTTCTGTaGCTTGTGTCATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITLWTFL*LVSSSH
Trigger: ATGAGAAGATGACACAAGTCACAGAAAAGTCCACAG...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTTGCAGTGGCGTTTTTaGTCATGGATTTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGLQWRF*SWISVD
Trigger: ATCTACAGAAATCCATGAGCAAAAACGCCACTGCAA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCGCTTGGTCTGTGAATTaGCTGAGTTGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCAWSVN*LSCGRK
Trigger: CTTCCTTCCACAACTCAGGCAATTCACAGACCAAGC...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAACTTACACCCTCCTTaGTTATCACCTCATTCCCCA +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRNLHPP*LSPHSP
Trigger: TGGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCTGTAGGCTTGTCAGTTaGCTTAGAATGGCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCCRLVS*LRMACG
Trigger: ACCACACGCCATTCTAAGCCAACTGACAAGCCTACA...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATCTGCATCATTGTACTaGGTGTTCTGGGTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSASLY*VFWVSV
Trigger: CACACTAACCCAGAACACCCAGTACAATGATGCAGA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTCTGCATCATTGTACTaGGTGTTCTGGGTTAGTGTG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNSASLY*VFWVSV
Trigger: CACACTAACCCAGAACACCCAGTACAATGATGCAGA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCACTCCAAGATCACCGTaGGGAAGGGATCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFTPRSP*GRDLAH
Trigger: ATGGGCCAGATCCCTTCCCCACGGTGATCTTGGAGT...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAATGCAGTGTTCTGCATTaGTGCCCCCACAACATGTCC +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKCSVLH*CPHNMS
Trigger: GGACATGTTGTGGGGGCACCAATGCAGAACACTGCA...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTTTCTGGGGTTCTTGTaGTTTTCTCTGTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNFLGFL*FSLWLT
Trigger: CGTCAACCACAGAGAAAACCACAAGAACCCCAGAAA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATTTCTGGGGTTCTTGTaGTTTTCTCTGTGGTTGACG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRFLGFL*FSLWLT
Trigger: CGTCAACCACAGAGAAAACCACAAGAACCCCAGAAA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTAGTTCCCCAGTTTTCTaGTATTCTTGGAATGTAGTA +
Preference number: 4 (lower is better)
Translates to: KINAETPIREGLGWRSVGSSPVF*YSWNVV
Trigger: TACTACATTCCAAGAATATCAGAAAACTGGGGAACT...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCTGGAGGTCTTTGTCCTaGATGCAGAACAATGTGATC +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCWRSLS*MQNNVI
Trigger: GATCACATTGTTCTGCATTCAGGACAAAGACCTCCA...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATGTGAGCTCATTGGCTaGTATGGTCTCTTGTATGTT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRCELIG*YGLLYV
Trigger: AACATACAAGAGACCATATCAGCCAATGAGCTCACA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTGTGAGCTCATTGGCTaGTATGGTCTCTTGTATGTT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNCELIG*YGLLYV
Trigger: AACATACAAGAGACCATATCAGCCAATGAGCTCACA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCTCCTGTGACCTTGACTaGAGGTTTTATAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITSCDLD*RFYSLC
Trigger: ACAAAGACTATAAAACCTTCAGTCAAGGTCACAGGA...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGTGGATACCTTTCTGTaGGCCATCTTTATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNVDTFL*AIFIEV
Trigger: TACCTCAATAAAGATGGCTCACAGAAAGGTATCCAC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGTGGATACCTTTCTGTaGGCCATCTTTATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRVDTFL*AIFIEV
Trigger: TACCTCAATAAAGATGGCTCACAGAAAGGTATCCAC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCTGTGATCACATTGGCTaGTGTAGCCCTATCTCTATG +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCCDHIG*CSPISM
Trigger: CATAGAGATAGGGCTACATCAGCCAATGTGATCACA...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATCTGTGGACTTTTCTGTaGCTTGTGTCATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLWTFL*LVSSSH
Trigger: ATGAGAAGATGACACAAGTCACAGAAAAGTCCACAG...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAGGTTTTCTCTGTGGTTaGCGTGGTCTTTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKGFLCG*RGLFWV
Trigger: CACCCAGAAAAGACCACGTCAACCACAGAGAAAACC...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTTGTTACCGTTGATTTaGCTGTTGTGGACTTACGAC +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLLPLI*LLWTYD
Trigger: GTCGTAAGTCCACAACAGGCAAATCAACGGTAACAA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCAAGGGATCTGGCCCATaGCAAGATTCTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFKGSGP*QDSAAP
Trigger: TGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTT...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTACCGTCAGTATTCTCTaGCCTTCCTGTAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLTVSIL*PSCSPG
Trigger: TCCGGGACTACAGGAAGGGCAGAGAATACTGACGGT...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCTCAGTGCAGTGTTCTaGATTGGTGCCCCCACAACA +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLLSAVF*IGAPTT
Trigger: TGTTGTGGGGGCACCAATGCAGAACACTGCACTGAG...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCCACACACAGATGAAATaGCTACAAGGAGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITHTQMK*LQGGKL
Trigger: AAGTTTTCCTCCTTGTAGGCATTTCATCTGTGTGTG...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATACTATAAACAAGGCCTaGAGTGAGGGGAAATATGTG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNTINKA*SEGKYV
Trigger: CACATATTTCCCCTCACTCCAGGCCTTGTTTATAGT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAACTATAAACAAGGCCTaGAGTGAGGGGAAATATGTG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRTINKA*SEGKYV
Trigger: CACATATTTCCCCTCACTCCAGGCCTTGTTTATAGT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCAGTTTTCTTCAGAAGTaGGAGGAGCCTCATGATTAT +
Preference number: 4 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITSFLQK*EEPHDY
Trigger: ATAATCATGAGGCTCCTCCCACTTCTGAAGAAAACT...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATATTGGGTCTTTCCCTTaGTTGCTGGAGTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNIGSFP*LLEFSS
Trigger: TGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAAT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCGGATCAACAGAGCGCTaGTTCCGGATCATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFGSTER*FRIIGS
Trigger: AGACCCAATGATCCGGAACCAGCGCTCTGTTGATCC...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACATTGATTTGCCTGTTGTaGACTTACGACAGTTTATTT +
Preference number: 4 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTLICLL*TYDSLF
Trigger: AAATAAACTGTCGTAAGTCCACAACAGGCAAATCAA...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATCCCTTTGGTGCATATaGTCTTCTTGTTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSLWCI*SSCSHW
Trigger: CCAATGAGAACAAGAAGACCATATGCACCAAAGGGA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304311.3
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTCCCTTTGGTGCATATaGTCTTCTTGTTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNSLWCI*SSCSHW
Trigger: CCAATGAGAACAAGAAGACCATATGCACCAAAGGGA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304311.3
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
CDS-3UTR CCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCCCATCTGTCCAGCGTaGATACCTTTCTGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLPICPA*IPFCEP
Trigger: TGGCTCACAGAAAGGTATCCACGCTGGACAGATGGG...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCTCCCTTTGGTGCATATaGTCTTCTCTGAGTATAGCG +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCSLWCI*SSLSIA
Trigger: CGCTATACTCAGAGAAGACCATATGCACCAAAGGGA...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATTTTCTTGTTACCGTTaGTTTGCCTGTTGTGGACTT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRFSCYR*FACCGL
Trigger: AAGTCCACAACAGGCAAATCAACGGTAACAAGAAAA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTTTTCTTGTTACCGTTaGTTTGCCTGTTGTGGACTT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNFSCYR*FACCGL
Trigger: AAGTCCACAACAGGCAAATCAACGGTAACAAGAAAA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAGTTGTAGTCTTATGTaGGCTGGTACTTGTCTTATC +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSCSLM*AGTCLI
Trigger: GATAAGACAAGTACCAGCTCACATAAGACTACAACT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATAGTTGTAGTCTTATGTaGGCTGGTACTTGTCTTATC +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNSCSLM*AGTCLI
Trigger: GATAAGACAAGTACCAGCTCACATAAGACTACAACT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAACTGCTAGAGATTGTGTaGGCTCATTGGCTGATATGG +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKLLEIV*AHWLIW
Trigger: CCATATCAGCCAATGAGCTCACACAATCTCTAGCAG...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATCCTGTGACCTTGACTaGAGGTTTTATAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSCDLD*RFYSLC
Trigger: ACAAAGACTATAAAACCTTCAGTCAAGGTCACAGGA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTCCTGTGACCTTGACTaGAGGTTTTATAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNSCDLD*RFYSLC
Trigger: ACAAAGACTATAAAACCTTCAGTCAAGGTCACAGGA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCGTGGATACCTTTCTGTaGGCCATCTTTATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCVDTFL*AIFIEV
Trigger: TACCTCAATAAAGATGGCTCACAGAAAGGTATCCAC...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCAACATAATGCTGTCCTaGAACCCAGAGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFNIMLS*NPETLP
Trigger: GGGCAGAGTCTCTGGGTTTCAGGACAGCATTATGTT...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTAACATAATGCTGTCCTaGAACCCAGAGACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLNIMLS*NPETLP
Trigger: GGGCAGAGTCTCTGGGTTTCAGGACAGCATTATGTT...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCGTGGAGATCAGTGGGTaGGACTGCTGGCCAAATAAA +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFVEISG*DCWPNK
Trigger: TTTATTTGGCCAGCAGTCTCACCCACTGATCTCCAC...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCTGCTGCAGATGAGGTaGTCTTGTCATTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLLLQMR*SCHWVM
Trigger: CATCACCCAATGACAAGATCACCTCATCTGCAGCAG...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCCTGCTGCAGATGAGGTaGTCTTGTCATTGGGTGATG +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFLLQMR*SCHWVM
Trigger: CATCACCCAATGACAAGATCACCTCATCTGCAGCAG...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCAGACTCTGCTGCAGATaGGGTGATCTTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFRLCCR*GDLVIG
Trigger: CCCAATGACAAGATCACCTCATCTGCAGCAGAGTCT...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTGGTTTTCTCTGTGGTTaGCGTGGTCTTTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLGFLCG*RGLFWV
Trigger: CACCCAGAAAAGACCACGTCAACCACAGAGAAAACC...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTTGCAGTGGCGTTTTTaGTCATGGATTTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLQWRF*SWISVD
Trigger: ATCTACAGAAATCCATGAGCAAAAACGCCACTGCAA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR GCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAGCTTGGTCTGTGAATTaGCTGAGTTGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKAWSVN*LSCGRK
Trigger: CTTCCTTCCACAACTCAGGCAATTCACAGACCAAGC...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTTGTTCTGGGTTAGTGTaGGGCGTGTCCGCATCATAT +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLCSGLV*GVSASY
Trigger: ATATGATGCGGACACGCCGCACACTAACCCAGAACA...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCTGTTCTGGGTTAGTGTaGGGCGTGTCCGCATCATAT +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFCSGLV*GVSASY
Trigger: ATATGATGCGGACACGCCGCACACTAACCCAGAACA...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTAGTGTTCTGCATTGGTaGCCCCACAACATGTCCATC +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLSVLHW*PHNMSI
Trigger: GATGGACATGTTGTGGGGGCACCAATGCAGAACACT...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAGTTTTCTTCAGAAGTaGGAGGAGCCTCATGATTAT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSFLQK*EEPHDY
Trigger: ATAATCATGAGGCTCCTCCCACTTCTGAAGAAAACT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCATTGGGTCTTTCCCTTaGTTGCTGGAGTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCIGSFP*LLEFSS
Trigger: TGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAAT...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGAATTGCCTGAGTTGTaGAAGGAAGTTGTAGTCTTA +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRELPEL*KEVVVL
Trigger: TAAGACTACAACTTCCTTCCACAACTCAGGCAATTC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGAATTGCCTGAGTTGTaGAAGGAAGTTGTAGTCTTA +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNELPEL*KEVVVL
Trigger: TAAGACTACAACTTCCTTCCACAACTCAGGCAATTC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGTGTGTTTTTCCCTTTaGTGCATATGGTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRVCFSL*CIWSSC
Trigger: ACAAGAAGACCATATGCACCAAAGGGAAAAACACAC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304311.3
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGTGTGTTTTTCCCTTTaGTGCATATGGTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNVCFSL*CIWSSC
Trigger: ACAAGAAGACCATATGCACCAAAGGGAAAAACACAC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304311.3
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
CDS-3UTR CCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAACTCACAAGTCAGTCTaGGGCATTGCCTATAAGGCT +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKTHKSV*GIAYKA
Trigger: AGCCTTATAGGCAATGCCCCAGACTGACTTGTGAGT...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATAGTTCCCCAGTTTTCTaGTATTCTTGGAATGTAGTA +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNSSPVF*YSWNVV
Trigger: TACTACATTCCAAGAATATCAGAAAACTGGGGAACT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAGTTCCCCAGTTTTCTaGTATTCTTGGAATGTAGTA +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSSPVF*YSWNVV
Trigger: TACTACATTCCAAGAATATCAGAAAACTGGGGAACT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCGTGGGAGGAGCCTCATaGTTATCTGTAGAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFVGGAS*LSVELL
Trigger: CAAAAGCTCTACAGATAATCATGAGGCTCCTCCCAC...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCTTTTCTTGTTACCGTTaGTTTGCCTGTTGTGGACTT +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCFSCYR*FACCGL
Trigger: AAGTCCACAACAGGCAAATCAACGGTAACAAGAAAA...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATAGTTTCAAGAACAGATaGAGGGTTAATACTGGTAAC +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNSFKNR*RVNTGN
Trigger: GTTACCAGTATTAACCCTTCATCTGTTCTTGAAACT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTTACCGTACATTAGGCTaGCAATTGCTGCCACCAAAG +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLYRTLG*QLLPPK
Trigger: CTTTGGTGGCAGCAATTGTCAGCCTAATGTACGGTA...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR GCA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCTTGCAGTGGCGTTTTTaGTCATGGATTTCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: PVSRTDEGLILVTVSILCLQWRF*SWISVD
Trigger: ATCTACAGAAATCCATGAGCAAAAACGCCACTGCAA...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTGCTTGGTCTGTGAATTaGCTGAGTTGTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLAWSVN*LSCGRK
Trigger: CTTCCTTCCACAACTCAGGCAATTCACAGACCAAGC...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAAACTTACACCCTCCTTaGTTATCACCTCATTCCCCA +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKNLHPP*LSPHSP
Trigger: TGGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTT...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTATCCAAAGTACTCATaGACTTTTCCAAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNYPKYS*TFPKVF
Trigger: GAAGACCTTTGGAAAAGTCCATGAGTACTTTGGATA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATATCCAAAGTACTCATaGACTTTTCCAAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRYPKYS*TFPKVF
Trigger: GAAGACCTTTGGAAAAGTCCATGAGTACTTTGGATA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCCTTTTATGGTCTCAGTaGTCAGTGTGGTGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFLLWSQ*SVWCSP
Trigger: TGGGGAACACCACACTGACCACTGAGACCATAAAAG...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCTTACTGGGGCTTTTATaGTCTCAGTGGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFLLGLL*SQWSVW
Trigger: CCACACTGACCACTGAGACCATAAAAGCCCCAGTAA...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTTTACTGGGGCTTTTATaGTCTCAGTGGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLLLGLL*SQWSVW
Trigger: CCACACTGACCACTGAGACCATAAAAGCCCCAGTAA...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTACTCACAAGTCAGTCTaGGGCATTGCCTATAAGGCT +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLTHKSV*GIAYKA
Trigger: AGCCTTATAGGCAATGCCCCAGACTGACTTGTGAGT...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCACTCACAAGTCAGTCTaGGGCATTGCCTATAAGGCT +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFTHKSV*GIAYKA
Trigger: AGCCTTATAGGCAATGCCCCAGACTGACTTGTGAGT...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCTGTGATCACATTGGCTaGTGTAGCCCTATCTCTATG +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFCDHIG*CSPISM
Trigger: CATAGAGATAGGGCTACATCAGCCAATGTGATCACA...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAACTGTGGACTTTTCTGTaGCTTGTGTCATCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKLWTFL*LVSSSH
Trigger: ATGAGAAGATGACACAAGTCACAGAAAAGTCCACAG...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTTGATTTGCCTGTTGTaGACTTACGACAGTTTATTT +
Preference number: 4 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLICLL*TYDSLF
Trigger: AAATAAACTGTCGTAAGTCCACAACAGGCAAATCAA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATTGATTTGCCTGTTGTaGACTTACGACAGTTTATTT +
Preference number: 4 (lower is better)
Translates to: LILVTVSILCPSCSPGNRLICLL*TYDSLF
Trigger: AAATAAACTGTCGTAAGTCCACAACAGGCAAATCAA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAATCCCTTTGGTGCATATaGTCTTCTTGTTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKSLWCI*SSCSHW
Trigger: CCAATGAGAACAAGAAGACCATATGCACCAAAGGGA...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304311.3
CDS-3UTR CCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTTTTTATAGGCTCTGCTaGGGCTGGTGTGATCACATT +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLFYRLC*GWCDHI
Trigger: AATGTGATCACACCAGCCCCAGCAGAGCCTATAAAA...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
3UTR CAA 72 bp AGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCTTaGTCCCCTAAACTTACACCCTCCTTGCTTATCACC +
Preference number: 4 (lower is better)
Translates to: RECLLVLFILSS*SPKLTPSLLIT
Trigger: GGTGATAAGCAAGGAGGGTGTAAGTTTAGGGGACAAAGAAGAAAGAATGAATAATACGAGCAGACATTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTTGTGAGCTCATTGGCTaGTATGGTCTCTTGTATGTT +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLCELIG*YGLLYV
Trigger: AACATACAAGAGACCATATCAGCCAATGAGCTCACA...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCGTGGATACCTTTCTGTaGGCCATCTTTATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFVDTFL*AIFIEV
Trigger: TACCTCAATAAAGATGGCTCACAGAAAGGTATCCAC...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAAGTTCCCCAGTTTTCTaGTATTCTTGGAATGTAGTA +
Preference number: 4 (lower is better)
Translates to: TIIIILLFPLYPISNKVKSSPVF*YSWNVV
Trigger: TACTACATTCCAAGAATATCAGAAAACTGGGGAACT...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTTCCTGTGACCTTGACTaGAGGTTTTATAGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLSCDLD*RFYSLC
Trigger: ACAAAGACTATAAAACCTTCAGTCAAGGTCACAGGA...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR GCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCACACACAGATGAAATaGCTACAAGGAGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLHTQMK*LQGGKL
Trigger: AAGTTTTCCTCCTTGTAGGCATTTCATCTGTGTGTG...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR TCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTAGTTTCAAGAACAGATaGAGGGTTAATACTGGTAAC +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLSFKNR*RVNTGN
Trigger: GTTACCAGTATTAACCCTTCATCTGTTCTTGAAACT...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCTATCCAAAGTACTCATaGACTTTTCCAAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFYPKYS*TFPKVF
Trigger: GAAGACCTTTGGAAAAGTCCATGAGTACTTTGGATA...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CCA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTTTGATTTGCCTGTTGTaGACTTACGACAGTTTATTT +
Preference number: 4 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLLICLL*TYDSLF
Trigger: AAATAAACTGTCGTAAGTCCACAACAGGCAAATCAA...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS CCA 90 bp AGGAAGAGGAGGCAGCACTGGAGGCCAAAGGCGGAGCAGAGGCTGTaGACCGGCTGGGCCATGTCGGAGCTGGGTGGCTGCTTGGGGACC +
Preference number: 5 (lower is better)
Translates to: RKRRQHWRPKAEQRL*TGWAMSELGGCLGT
Trigger: GGTCCCCAAGCAGCCACCCAGCTCCGACATGGCCCAGCCGGTCCACAGCCTCTGCTCCGCCTTTGGCCTCCAGTGCTGCCTCCTCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548730.1
CDS CCA 90 bp AGAGCATGGAAGAGCCAGGGCTGGGCGCCTACTCCAAGATCACCGTaGGGAAGGGATCTGGCCCATGCCAAGATTCTGCTGCTCCATCAG +
Preference number: 5 (lower is better)
Translates to: RAWKSQGWAPTPRSP*GRDLAHAKILLLHQ
Trigger: CTGATGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACGGTGATCTTGGAGTAGGCGCCCAGCCCTGGCTCTTCCATGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS GCA 90 bp CTGGGCGCCTACTCCAAGATCACCGTGGGGAAGGGATCTGGCCCATaGCAAGATTCTGCTGCTCCATCAGGTAGACCGGGTAGGAATTGG +
Preference number: 5 (lower is better)
Translates to: LGAYSKITVGKGSGP*QDSAAPSGRPGRNW
Trigger: CCAATTCCTACCCGGTCTACCTGATGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACGGTGATCTTGGAGTAGGCGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGAGCTGGTTCCGGATCATaGGGTCTTTCCCTTGGTTGC +
Preference number: 5 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRAGSGS*GLSLGC
Trigger: GCAACCAAGGGAAAGACCCAATGATCCGGAACCAGC...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATGCTGGTTCCGGATCATaGGGTCTTTCCCTTGGTTGC +
Preference number: 5 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHAGSGS*GLSLGC
Trigger: GCAACCAAGGGAAAGACCCAATGATCCGGAACCAGC...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGAGTGCAGTGTTCTGCATaGGTGCCCCCACAACATGTC +
Preference number: 5 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRVQCSA*VPPQHV
Trigger: GACATGTTGTGGGGGCACCAATGCAGAACACTGCAC...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS CCA 90 bp CCATGCCAAGATTCTGCTGCTCCATCAGGTAGACCGGGTAGGAATTaGGGCCACCCTCATCCTCTGCATCATTGTACTGGGTGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: PCQDSAAPSGRPGRN*GHPHPLHHCTGCSG
Trigger: CCCAGAACACCCAGTACAATGATGCAGAGGATGAGGGTGGCCCCAATTCCTACCCGGTCTACCTGATGGAGCAGCAGAATCTTGGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATATAAAAATCCCCTCCTaGCGTGTCCACCCACAACCC +
Preference number: 5 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHIKIPS*RVHPQP
Trigger: GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTAT...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGGAATGGCGTGTGGTGTaGCAGTGGCGTTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLEWRVV*QWRFCS
Trigger: TGAGCAAAAACGCCACTGCAACACCACACGCCATTC...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTGCAGTGTTCTGCATaGGTGCCCCCACAACATGTC +
Preference number: 5 (lower is better)
Translates to: NAETPIREGLGWRSVGETVQCSA*VPPQHV
Trigger: GACATGTTGTGGGGGCACCAATGCAGAACACTGCAC...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCAAGTCAGTCTGGGGCATaGCCTATAAGGCTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPSQSGA*PIRLLS
Trigger: GGACAGGAGCCTTATAGGCAATGCCCCAGACTGACT...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATGCTGGTGTGATCACATaGGCTGATGTAGCCCTATCT +
Preference number: 5 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHAGVIT*ADVALS
Trigger: AGATAGGGCTACATCAGCCAATGTGATCACACCAGC...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS CCA 90 bp GGTAGTGGAGTCAGCAGGATCAACAGAGCGCTGGTTCCGGATCATTaGGTCTTTCCCTTGGTTGCTGGAGTTTTCTTCAGAAGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: GSGVSRINRALVPDH*VFPLVAGVFFRSGR
Trigger: CCTCCCACTTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGCTCTGTTGATCCTGCTGACTCCACTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGATGCTTGGTCTGTGAATaGCCTGAGTTGTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRCLVCE*PELWKE
Trigger: TTCCTTCCACAACTCAGGCAATTCACAGACCAAGCA...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATGGGGTTCCTGTGGTCTaGTATGTTGTTTTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHGVPVV*YVVFEA
Trigger: AGCCTCAAAAACAACATACAAGACCACAGGAACCCC...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTATAAAAATCCCCTCCTaGCGTGTCCACCCACAACCC +
Preference number: 5 (lower is better)
Translates to: NAETPIREGLGWRSVGETIKIPS*RVHPQP
Trigger: GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTAT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCAATAAAAATCCCCTCCTaGCGTGTCCACCCACAACCC +
Preference number: 5 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPIKIPS*RVHPQP
Trigger: GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTAT...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCGCTGGTGTGATCACATaGGCTGATGTAGCCCTATCT +
Preference number: 5 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPAGVIT*ADVALS
Trigger: AGATAGGGCTACATCAGCCAATGTGATCACACCAGC...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS GCA 90 bp CACCCTCATCCTCTGCATCATTGTACTGGGTGTTCTGGGTTAGTGTaGGGCGTGTCCGCATCATATAGGAGACCAAGAAGATCAGGCCAA +
Preference number: 5 (lower is better)
Translates to: HPHPLHHCTGCSGLV*GVSASYRRPRRSGQ
Trigger: TTGGCCTGATCTTCTTGGTCTCCTATATGATGCGGACACGCCGCACACTAACCCAGAACACCCAGTACAATGATGCAGAGGATGAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGGGGTCTTTCCCTTGGTaGCTGGAGTTTTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGGSFPW*LEFSSE
Trigger: TTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCC...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGATGTGAATTGCCTGAGTaGTGGAAGGAAGTTGTAGTC +
Preference number: 5 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRCELPE*WKEVVV
Trigger: GACTACAACTTCCTTCCACAACTCAGGCAATTCACA...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGACATTGTGAATTGCCTGAGTaGTGGAAGGAAGTTGTAGTC +
Preference number: 5 (lower is better)
Translates to: RVHPQPSKPNQQGVHCRHCELPE*WKEVVV
Trigger: GACTACAACTTCCTTCCACAACTCAGGCAATTCACA...ATGTCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGAGATTGTGTGAGCTCATaGGCTGATATGGTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRDCVSS*ADMVSC
Trigger: ACAAGAGACCATATCAGCCAATGAGCTCACACAATC...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCTCATCCTCTGCATCATaGTACTGGGTGTTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPSSSAS*YWVFWV
Trigger: AACCCAGAACACCCAGTACAATGATGCAGAGGATGA...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGTGCAGTGTTCTGCATaGGTGCCCCCACAACATGTC +
Preference number: 5 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTVQCSA*VPPQHV
Trigger: GACATGTTGTGGGGGCACCAATGCAGAACACTGCAC...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGAGCTACAGCTGGCTTTaGGTGGAAGAGACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLSYSWL*VEETGK
Trigger: TTTTCCTGTCTCTTCCACCAAAAGCCAGCTGTAGCT...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCAGCAGATGAGGTGATCTaGTCATTGGGTGATGTGGTC +
Preference number: 5 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPADEVI*SLGDVV
Trigger: GACCACATCACCCAATGACAAGATCACCTCATCTGC...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTGGTTTTCTCTGTGGTaGACGTGGTCTTTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLWFSLW*TWSFLG
Trigger: ACCCAGAAAAGACCACGTCAACCACAGAGAAAACCA...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTAACTGGCAGGCCTTCTaGATACCGTACATTAGGCTG +
Preference number: 5 (lower is better)
Translates to: NAETPIREGLGWRSVGETNWQAF*IPYIRL
Trigger: CAGCCTAATGTACGGTATCAAGAAGGCCTGCCAGTT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR CAA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCGTTGCAGTGGCGTTTTaGCTCATGGATTTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPVAVAF*LMDFCR
Trigger: TCTACAGAAATCCATGAGCAAAAACGCCACTGCAAC...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCTTGTGGTCTATAGTTTaGGAGTTGCCTGTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPLWSIV*ELPVGL
Trigger: CAAGCCTACAGGCAACTCCAAAACTATAGACCACAA...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGCTGGTTCCGGATCATaGGGTCTTTCCCTTGGTTGC +
Preference number: 5 (lower is better)
Translates to: DRKINAETPIREGLGWRSAGSGS*GLSLGC
Trigger: GCAACCAAGGGAAAGACCCAATGATCCGGAACCAGC...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCTTGTTACCGTTGATTaGCCTGTTGTGGACTTACGA +
Preference number: 5 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGLVTVD*PVVDLR
Trigger: TCGTAAGTCCACAACAGGCAAATCAACGGTAACAAG...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCTGTGAATTGCCTGAGTaGTGGAAGGAAGTTGTAGTC +
Preference number: 5 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPCELPE*WKEVVV
Trigger: GACTACAACTTCCTTCCACAACTCAGGCAATTCACA...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGGTTTTTGTCAGGAGCTaGTCTGAGGCAACTGTTGTT +
Preference number: 5 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLVFVRS*SEATVV
Trigger: AACAACAGTTGCCTCAGACAAGCTCCTGACAAAAAC...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGGGTGTGTTTTTCCCTTaGGTGCATATGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGGVFFP*VHMVFL
Trigger: CAAGAAGACCATATGCACCAAAGGGAAAAACACACC...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000304311.3
CDS-3UTR CAA 90 bp GGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCGTAGTAGTGAGAGATTaGTCTCCTGTGACCTTGACT +
Preference number: 5 (lower is better)
Translates to: GETAGQIKIPSLRVHPQPVVVRD*SPVTLT
Trigger: AGTCAAGGTCACAGGAGACAAATCTCTCACTACTAC...GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCATCATCCTCTGCATCATaGTACTGGGTGTTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPSSSAS*YWVFWV
Trigger: AACCCAGAACACCCAGTACAATGATGCAGAGGATGA...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTAGCTACAGCTGGCTTTaGGTGGAAGAGACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: NAETPIREGLGWRSVGETSYSWL*VEETGK
Trigger: TTTTCCTGTCTCTTCCACCAAAAGCCAGCTGTAGCT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCAGAGGTGATCTTGTCATaGGGTGATGTGGTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPEVILS*GDVVLS
Trigger: AGAAAGGACCACATCACCCAATGACAAGATCACCTC...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTTGGTTTTCTCTGTGGTaGACGTGGTCTTTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: NAETPIREGLGWRSVGETWFSLW*TWSFLG
Trigger: ACCCAGAAAAGACCACGTCAACCACAGAGAAAACCA...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS GCA 90 bp GATCAACAGAGCGCTGGTTCCGGATCATTGGGTCTTTCCCTTGGTTaGTGGAGTTTTCTTCAGAAGTGGGAGGAGCCTCATGATTATCTG +
Preference number: 5 (lower is better)
Translates to: DQQSAGSGSLGLSLG*WSFLQKWEEPHDYL
Trigger: CAGATAATCATGAGGCTCCTCCCACTTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGCTCTGTTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGATATGTGATCGGATGTaGAGAGTTCCCCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLICDRM*RVPQFS
Trigger: AGAAAACTGGGGAACTCTCAACATCCGATCACATAT...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGTCTATAGTTTTGGAGTaGCCTGTAGGCTTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGSIVLE*PVGLSV
Trigger: AACTGACAAGCCTACAGGCAACTCCAAAACTATAGA...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTCTTGTTACCGTTGATTaGCCTGTTGTGGACTTACGA +
Preference number: 5 (lower is better)
Translates to: NAETPIREGLGWRSVGETLVTVD*PVVDLR
Trigger: TCGTAAGTCCACAACAGGCAAATCAACGGTAACAAG...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGTGTCTGAGGCAACTGTaGTTCTGGAATCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGCLRQL*FWNLQF
Trigger: AAACTGAAGATTCCAGAACAACAGTTGCCTCAGACA...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCAGATTGTGTGAGCTCATaGGCTGATATGGTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPDCVSS*ADMVSC
Trigger: ACAAGAGACCATATCAGCCAATGAGCTCACACAATC...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGTGTGTTGTTCTCATaGGCTGTCCTTCCTCCATGT +
Preference number: 5 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTGVLFS*AVLPPC
Trigger: ACATGGAGGAAGGACAGCCAATGAGAACAACACACC...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTGCATATGGTCTTCTaGTTCTCATTGGCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: NAETPIREGLGWRSVGETVHMVF*FSLAVL
Trigger: AAGGACAGCCAATGAGAACAAGAAGACCATATGCAC...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304311.3
CDS-3UTR CAA 90 bp AAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGTTGTCTCCTGTGACCTaGACTGAAGGTTTTATAGTC +
Preference number: 5 (lower is better)
Translates to: KNPLLACPPTTQQAKPTGLSPVT*TEGFIV
Trigger: GACTATAAAACCTTCAGTCAAGGTCACAGGAGACAA...CCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTGTTGTCTCCTGTGACCTaGACTGAAGGTTTTATAGTC +
Preference number: 5 (lower is better)
Translates to: MLRHQSGKVWGGDQWVRLLSPVT*TEGFIV
Trigger: GACTATAAAACCTTCAGTCAAGGTCACAGGAGACAA...CAGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTATAAAAATCCCCTCCTaGCGTGTCCACCCACAACCC +
Preference number: 5 (lower is better)
Translates to: KINAETPIREGLGWRSVGIKIPS*RVHPQP
Trigger: GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTAT...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGCAGATGAGGTGATCTaGTCATTGGGTGATGTGGTC +
Preference number: 5 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTADEVI*SLGDVV
Trigger: GACCACATCACCCAATGACAAGATCACCTCATCTGC...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS CCA 90 bp CCTGTAGGCTTGTCAGTTGGCTTAGAATGGCGTGTGGTGTTGCAGTaGCGTTTTTGCTCATGGATTTCTGTAGATTTAGGGAGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: PVGLSVGLEWRVVLQ*RFCSWISVDLGSSG
Trigger: TCCAGAGCTCCCTAAATCTACAGAAATCCATGAGCAAAAACGCCACTGCAACACCACACGCCATTCTAAGCCAACTGACAAGCCTACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CCA 90 bp GATTCTTTATGTGTGGTAGTGGAGTCAGCAGGATCAACAGAGCGCTaGTTCCGGATCATTGGGTCTTTCCCTTGGTTGCTGGAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: DSLCVVVESAGSTER*FRIIGSFPWLLEFS
Trigger: AGAAAACTCCAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGCTCTGTTGATCCTGCTGACTCCACTACCACACATAAAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CCA 90 bp ATGGCCCATGCAGGGAATGAATCATTCTCTCCCATCTGTCCAGCGTaGATACCTTTCTGTGAGCCATCTTTATTGAGGTATGGATGGCTC +
Preference number: 5 (lower is better)
Translates to: MAHAGNESFSPICPA*IPFCEPSLLRYGWL
Trigger: GAGCCATCCATACCTCAATAAAGATGGCTCACAGAAAGGTATCCACGCTGGACAGATGGGAGAGAATGATTCATTCCCTGCATGGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTATATGTGATCGGATGTaGAGAGTTCCCCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: NAETPIREGLGWRSVGETICDRM*RVPQFS
Trigger: AGAAAACTGGGGAACTCTCAACATCCGATCACATAT...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCGAATGGCGTGTGGTGTaGCAGTGGCGTTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITEWRVV*QWRFCS
Trigger: TGAGCAAAAACGCCACTGCAACACCACACGCCATTC...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGCGTCCACTGTAGATTATCTGTAGAGCTTTaGTGGTCTATAGTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: LRVHPQPSKPNQQGVHCRLSVEL*WSIVLE
Trigger: CTCCAAAACTATAGACCACAAAAGCTCTACAGATAA...TCTACAGTGGACGCCCTGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGCTGGTTCCGGATCATaGGGTCTTTCCCTTGGTTGC +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRAGSGS*GLSLGC
Trigger: GCAACCAAGGGAAAGACCCAATGATCCGGAACCAGC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGGGGTTCCTGTGGTCTaGTATGTTGTTTTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTGVPVV*YVVFEA
Trigger: AGCCTCAAAAACAACATACAAGACCACAGGAACCCC...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGTGGGTGAGACTGCTGGCCAAATAAAAATCCCCTCCTTGCGTGTCCACCCATGTCTGAGGCAACTGTaGTTCTGGAATCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: SVGETAGQIKIPSLRVHPCLRQL*FWNLQF
Trigger: AAACTGAAGATTCCAGAACAACAGTTGCCTCAGACA...TGGGTGGACACGCAAGGAGGGGATTTTTATTTGGCCAGCAGTCTCACCCACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGGTGTGTTGTTCTCATaGGCTGTCCTTCCTCCATGT +
Preference number: 5 (lower is better)
Translates to: DRKINAETPIREGLGWRSGVLFS*AVLPPC
Trigger: ACATGGAGGAAGGACAGCCAATGAGAACAACACACC...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGTGCAGTGTTCTGCATaGGTGCCCCCACAACATGTC +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRVQCSA*VPPQHV
Trigger: GACATGTTGTGGGGGCACCAATGCAGAACACTGCAC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGTGCAGTGTTCTGCATaGGTGCCCCCACAACATGTC +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNVQCSA*VPPQHV
Trigger: GACATGTTGTGGGGGCACCAATGCAGAACACTGCAC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATAGTCAGTCTGGGGCATaGCCTATAAGGCTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNSQSGA*PIRLLS
Trigger: GGACAGGAGCCTTATAGGCAATGCCCCAGACTGACT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAGTCAGTCTGGGGCATaGCCTATAAGGCTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSQSGA*PIRLLS
Trigger: GGACAGGAGCCTTATAGGCAATGCCCCAGACTGACT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAAGCTACAGCTGGCTTTaGGTGGAAGAGACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTSYSWL*VEETGK
Trigger: TTTTCCTGTCTCTTCCACCAAAAGCCAGCTGTAGCT...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGAGGTGATCTTGTCATaGGGTGATGTGGTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTEVILS*GDVVLS
Trigger: AGAAAGGACCACATCACCCAATGACAAGATCACCTC...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGCAGATGAGGTGATCTaGTCATTGGGTGATGTGGTC +
Preference number: 5 (lower is better)
Translates to: KINAETPIREGLGWRSVGADEVI*SLGDVV
Trigger: GACCACATCACCCAATGACAAGATCACCTCATCTGC...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGCTGGTGTGATCACATaGGCTGATGTAGCCCTATCT +
Preference number: 5 (lower is better)
Translates to: DRKINAETPIREGLGWRSAGVIT*ADVALS
Trigger: AGATAGGGCTACATCAGCCAATGTGATCACACCAGC...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCTGTCCATGGCACCAGTaGAAGTGTGTTGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: PVSRTDEGLILVTVSILCCPWHQ*KCVGQA
Trigger: GGCCTGGCCAACACACTTCAACTGGTGCCATGGACA...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGAATGGCGTGTGGTGTaGCAGTGGCGTTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNEWRVV*QWRFCS
Trigger: TGAGCAAAAACGCCACTGCAACACCACACGCCATTC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTCATTGGGTCTTTCCCTaGGTTGCTGGAGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: KINAETPIREGLGWRSVGHWVFP*VAGVFF
Trigger: GAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATG...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGACTTATGTGAGCTGGTACTaGTCTTATCCAAAGTACTCA +
Preference number: 5 (lower is better)
Translates to: NAETPIREGLGWRSVGETYVSWY*SYPKYS
Trigger: TGAGTACTTTGGATAAGACAAGTACCAGCTCACATA...AGTCTCACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTGCTTGGTCTGTGAATaGCCTGAGTTGTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: KINAETPIREGLGWRSVGCLVCE*PELWKE
Trigger: TTCCTTCCACAACTCAGGCAATTCACAGACCAAGCA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AATAAAAATCCCCTCCTTGCGTGTCCACCCACAACCCAGCAAGCCAAACCAACAGTAGTAGTGAGAGATTaGTCTCCTGTGACCTTGACT +
Preference number: 5 (lower is better)
Translates to: NKNPLLACPPTTQQAKPTVVVRD*SPVTLT
Trigger: AGTCAAGGTCACAGGAGACAAATCTCTCACTACTAC...TGTTGGTTTGGCTTGCTGGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAAAACTTACACCCTCCTaGCTTATCACCTCATTCCCC +
Preference number: 5 (lower is better)
Translates to: DRKINAETPIREGLGWRSKLTPS*LITSFP
Trigger: GGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTTT...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCAGTCAGTCTGGGGCATaGCCTATAAGGCTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: PVSRTDEGLILVTVSILCSQSGA*PIRLLS
Trigger: GGACAGGAGCCTTATAGGCAATGCCCCAGACTGACT...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTGAGGTGATCTTGTCATaGGGTGATGTGGTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: KINAETPIREGLGWRSVGEVILS*GDVVLS
Trigger: AGAAAGGACCACATCACCCAATGACAAGATCACCTC...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCGCTGGTGTGATCACATaGGCTGATGTAGCCCTATCT +
Preference number: 5 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITAGVIT*ADVALS
Trigger: AGATAGGGCTACATCAGCCAATGTGATCACACCAGC...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTGGTTTTCTCTGTGGTaGACGTGGTCTTTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: KINAETPIREGLGWRSVGWFSLW*TWSFLG
Trigger: ACCCAGAAAAGACCACGTCAACCACAGAGAAAACCA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS GCA 90 bp TTGTCAGTTGGCTTAGAATGGCGTGTGGTGTTGCAGTGGCGTTTTTaGTCATGGATTTCTGTAGATTTAGGGAGCTCTGGAGGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: LSVGLEWRVVLQWRF*SWISVDLGSSGGLC
Trigger: ACAAAGACCTCCAGAGCTCCCTAAATCTACAGAAATCCATGAGCAAAAACGCCACTGCAACACCACACGCCATTCTAAGCCAACTGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTTGCAGTGGCGTTTTaGCTCATGGATTTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: DRKINAETPIREGLGWRSVAVAF*LMDFCR
Trigger: TCTACAGAAATCCATGAGCAAAAACGCCACTGCAAC...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCGAATGGCGTGTGGTGTaGCAGTGGCGTTTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: PVSRTDEGLILVTVSILCEWRVV*QWRFCS
Trigger: TGAGCAAAAACGCCACTGCAACACCACACGCCATTC...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGAGTTGCCTGTAGGCTaGTCAGTTGGCTTAGAATGG +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNELPVG*SVGLEW
Trigger: CCATTCTAAGCCAACTGACAAGCCTACAGGCAACTC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCCATTGGGTCTTTCCCTaGGTTGCTGGAGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITHWVFP*VAGVFF
Trigger: GAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATG...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGGTGTGTTGTTCTCATaGGCTGTCCTTCCTCCATGT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNGVLFS*AVLPPC
Trigger: ACATGGAGGAAGGACAGCCAATGAGAACAACACACC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCATAAAAATCCCCTCCTaGCGTGTCCACCCACAACCC +
Preference number: 5 (lower is better)
Translates to: PVSRTDEGLILVTVSILCIKIPS*RVHPQP
Trigger: GGGTTGTGGGTGGACACGCAAGGAGGGGATTTTTAT...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCAGCTACAGCTGGCTTTaGGTGGAAGAGACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITSYSWL*VEETGK
Trigger: TTTTCCTGTCTCTTCCACCAAAAGCCAGCTGTAGCT...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCGAGGTGATCTTGTCATaGGGTGATGTGGTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITEVILS*GDVVLS
Trigger: AGAAAGGACCACATCACCCAATGACAAGATCACCTC...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGCAGATGAGGTGATCTaGTCATTGGGTGATGTGGTC +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRADEVI*SLGDVV
Trigger: GACCACATCACCCAATGACAAGATCACCTCATCTGC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGCTGGTGTGATCACATaGGCTGATGTAGCCCTATCT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNAGVIT*ADVALS
Trigger: AGATAGGGCTACATCAGCCAATGTGATCACACCAGC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS CCA 90 bp TCTATAGTTTTGGAGTTGCCTGTAGGCTTGTCAGTTGGCTTAGAATaGCGTGTGGTGTTGCAGTGGCGTTTTTGCTCATGGATTTCTGTA +
Preference number: 5 (lower is better)
Translates to: SIVLELPVGLSVGLE*RVVLQWRFCSWISV
Trigger: TACAGAAATCCATGAGCAAAAACGCCACTGCAACACCACACGCCATTCTAAGCCAACTGACAAGCCTACAGGCAACTCCAAAACTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTATATGTGATCGGATGTaGAGAGTTCCCCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: KINAETPIREGLGWRSVGICDRM*RVPQFS
Trigger: AGAAAACTGGGGAACTCTCAACATCCGATCACATAT...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCGAGTTGCCTGTAGGCTaGTCAGTTGGCTTAGAATGG +
Preference number: 5 (lower is better)
Translates to: PVSRTDEGLILVTVSILCELPVG*SVGLEW
Trigger: CCATTCTAAGCCAACTGACAAGCCTACAGGCAACTC...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGGGTCTTTCCCTTGGTaGCTGGAGTTTTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRGSFPW*LEFSSE
Trigger: TTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGGGTCTTTCCCTTGGTaGCTGGAGTTTTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNGSFPW*LEFSSE
Trigger: TTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGACATTGGGTCTTTCCCTaGGTTGCTGGAGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRHWVFP*VAGVFF
Trigger: GAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATG...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATCATTGGGTCTTTCCCTaGGTTGCTGGAGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNHWVFP*VAGVFF
Trigger: GAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATG...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTGCTTGGTCTGTGAATaGCCTGAGTTGTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNCLVCE*PELWKE
Trigger: TTCCTTCCACAACTCAGGCAATTCACAGACCAAGCA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGGGGTTCCTGTGGTCTaGTATGTTGTTTTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRGVPVV*YVVFEA
Trigger: AGCCTCAAAAACAACATACAAGACCACAGGAACCCC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGGGGTTCCTGTGGTCTaGTATGTTGTTTTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNGVPVV*YVVFEA
Trigger: AGCCTCAAAAACAACATACAAGACCACAGGAACCCC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCGTTTTTGTCAGGAGCTaGTCTGAGGCAACTGTTGTT +
Preference number: 5 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITVFVRS*SEATVV
Trigger: AACAACAGTTGCCTCAGACAAGCTCCTGACAAAAAC...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp GACAGGAAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCATTGTCTCCTGTGACCTaGACTGAAGGTTTTATAGTC +
Preference number: 5 (lower is better)
Translates to: DRKINAETPIREGLGWRSLSPVT*TEGFIV
Trigger: GACTATAAAACCTTCAGTCAAGGTCACAGGAGACAA...TGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp AAAATAAATGCTGAGACACCAATCAGGGAAGGTCTGGGGTGGAGATCAGTGGGTTTGTCTCCTGTGACCTaGACTGAAGGTTTTATAGTC +
Preference number: 5 (lower is better)
Translates to: KINAETPIREGLGWRSVGLSPVT*TEGFIV
Trigger: GACTATAAAACCTTCAGTCAAGGTCACAGGAGACAA...ACCCACTGATCTCCACCCCAGACCTTCCCTGATTGGTGTCTCAGCATTTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTCATCCTCTGCATCATaGTACTGGGTGTTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNSSSAS*YWVFWV
Trigger: AACCCAGAACACCCAGTACAATGATGCAGAGGATGA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATCATCCTCTGCATCATaGTACTGGGTGTTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSSSAS*YWVFWV
Trigger: AACCCAGAACACCCAGTACAATGATGCAGAGGATGA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAAACTTACACCCTCCTaGCTTATCACCTCATTCCCC +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRKLTPS*LITSFP
Trigger: GGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTTT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAGTGCAGTGTTCTGCATaGGTGCCCCCACAACATGTC +
Preference number: 5 (lower is better)
Translates to: TIIIILLFPLYPISNKVKVQCSA*VPPQHV
Trigger: GACATGTTGTGGGGGCACCAATGCAGAACACTGCAC...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTGGTTTTCTCTGTGGTaGACGTGGTCTTTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNWFSLW*TWSFLG
Trigger: ACCCAGAAAAGACCACGTCAACCACAGAGAAAACCA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATGGTTTTCTCTGTGGTaGACGTGGTCTTTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRWFSLW*TWSFLG
Trigger: ACCCAGAAAAGACCACGTCAACCACAGAGAAAACCA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCGGTGTGTTTTTCCCTTaGGTGCATATGGTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITGVFFP*VHMVFS
Trigger: AGAGAAGACCATATGCACCAAAGGGAAAAACACACC...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATAGGTATGGATGGCTCTaGTTTCCTGTGGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNRYGWL*FPVASD
Trigger: ATCAGAAGCCACAGGAAACAAGAGCCATCCATACCT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416153.2
ENST00000614587.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAGGTATGGATGGCTCTaGTTTCCTGTGGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRRYGWL*FPVASD
Trigger: ATCAGAAGCCACAGGAAACAAGAGCCATCCATACCT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416153.2
ENST00000614587.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGTTGCAGTGGCGTTTTaGCTCATGGATTTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRVAVAF*LMDFCR
Trigger: TCTACAGAAATCCATGAGCAAAAACGCCACTGCAAC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGTTGCAGTGGCGTTTTaGCTCATGGATTTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNVAVAF*LMDFCR
Trigger: TCTACAGAAATCCATGAGCAAAAACGCCACTGCAAC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATTGTGGTCTATAGTTTaGGAGTTGCCTGTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRLWSIV*ELPVGL
Trigger: CAAGCCTACAGGCAACTCCAAAACTATAGACCACAA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTTGTGGTCTATAGTTTaGGAGTTGCCTGTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLWSIV*ELPVGL
Trigger: CAAGCCTACAGGCAACTCCAAAACTATAGACCACAA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCGGGTCTTTCCCTTGGTaGCTGGAGTTTTCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: PVSRTDEGLILVTVSILCGSFPW*LEFSSE
Trigger: TTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCC...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCCATTGGGTCTTTCCCTaGGTTGCTGGAGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: PVSRTDEGLILVTVSILCHWVFP*VAGVFF
Trigger: GAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATG...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATCTTGTTACCGTTGATTaGCCTGTTGTGGACTTACGA +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLVTVD*PVVDLR
Trigger: TCGTAAGTCCACAACAGGCAAATCAACGGTAACAAG...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGACTTGTTACCGTTGATTaGCCTGTTGTGGACTTACGA +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRLVTVD*PVVDLR
Trigger: TCGTAAGTCCACAACAGGCAAATCAACGGTAACAAG...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATGTGAATTGCCTGAGTaGTGGAAGGAAGTTGTAGTC +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRCELPE*WKEVVV
Trigger: GACTACAACTTCCTTCCACAACTCAGGCAATTCACA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTGTGAATTGCCTGAGTaGTGGAAGGAAGTTGTAGTC +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNCELPE*WKEVVV
Trigger: GACTACAACTTCCTTCCACAACTCAGGCAATTCACA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGTTTTTGTCAGGAGCTaGTCTGAGGCAACTGTTGTT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRVFVRS*SEATVV
Trigger: AACAACAGTTGCCTCAGACAAGCTCCTGACAAAAAC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGATTGTGTGAGCTCATaGGCTGATATGGTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRDCVSS*ADMVSC
Trigger: ACAAGAGACCATATCAGCCAATGAGCTCACACAATC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGATTGTGTGAGCTCATaGGCTGATATGGTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNDCVSS*ADMVSC
Trigger: ACAAGAGACCATATCAGCCAATGAGCTCACACAATC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGTGCATATGGTCTTCTaGTTCTCATTGGCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRVHMVF*FSLAVL
Trigger: AAGGACAGCCAATGAGAACAAGAAGACCATATGCAC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304311.3
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGTGCATATGGTCTTCTaGTTCTCATTGGCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNVHMVF*FSLAVL
Trigger: AAGGACAGCCAATGAGAACAAGAAGACCATATGCAC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304311.3
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGGTGTGTTTTTCCCTTaGGTGCATATGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRGVFFP*VHMVFL
Trigger: CAAGAAGACCATATGCACCAAAGGGAAAAACACACC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304311.3
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGGTGTGTTTTTCCCTTaGGTGCATATGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNGVFFP*VHMVFL
Trigger: CAAGAAGACCATATGCACCAAAGGGAAAAACACACC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304311.3
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAGTAGTAGTGAGAGATTaGTCTCCTGTGACCTTGACT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRVVVRD*SPVTLT
Trigger: AGTCAAGGTCACAGGAGACAAATCTCTCACTACTAC...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGTAGTAGTGAGAGATTaGTCTCCTGTGACCTTGACT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNVVVRD*SPVTLT
Trigger: AGTCAAGGTCACAGGAGACAAATCTCTCACTACTAC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCAAACTTACACCCTCCTaGCTTATCACCTCATTCCCC +
Preference number: 5 (lower is better)
Translates to: PVSRTDEGLILVTVSILCKLTPS*LITSFP
Trigger: GGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTTT...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATGGTGTGTTTTTCCCTTaGGTGCATATGGTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNGVFFP*VHMVFS
Trigger: AGAGAAGACCATATGCACCAAAGGGAAAAACACACC...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAATATGTGATCGGATGTaGAGAGTTCCCCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRICDRM*RVPQFS
Trigger: AGAAAACTGGGGAACTCTCAACATCCGATCACATAT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATATATGTGATCGGATGTaGAGAGTTCCCCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNICDRM*RVPQFS
Trigger: AGAAAACTGGGGAACTCTCAACATCCGATCACATAT...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATCTATAGTTTTGGAGTaGCCTGTAGGCTTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRSIVLE*PVGLSV
Trigger: AACTGACAAGCCTACAGGCAACTCCAAAACTATAGA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTCTATAGTTTTGGAGTaGCCTGTAGGCTTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNSIVLE*PVGLSV
Trigger: AACTGACAAGCCTACAGGCAACTCCAAAACTATAGA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCATTTTCTTGTTACCGTaGATTTGCCTGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITIFLLP*ICLLWT
Trigger: AGTCCACAACAGGCAAATCAACGGTAACAAGAAAAT...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTGGTGCCCCCACAACATGTCCATCAAACACCTTTTCATTCTCAGACCATTACCTATGTGAGCTGGTACTaGTCTTATCCAAAGTACTCA +
Preference number: 5 (lower is better)
Translates to: LVPPQHVHQTPFHSQTITYVSWY*SYPKYS
Trigger: TGAGTACTTTGGATAAGACAAGTACCAGCTCACATA...GGTAATGGTCTGAGAATGAAAAGGTGTTTGATGGACATGTTGTGGGGGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTGTCTGAGGCAACTGTaGTTCTGGAATCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNCLRQL*FWNLQF
Trigger: AAACTGAAGATTCCAGAACAACAGTTGCCTCAGACA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATGTCTGAGGCAACTGTaGTTCTGGAATCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRCLRQL*FWNLQF
Trigger: AAACTGAAGATTCCAGAACAACAGTTGCCTCAGACA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAGGTGTGTTGTTCTCATaGGCTGTCCTTCCTCCATGT +
Preference number: 5 (lower is better)
Translates to: TIIIILLFPLYPISNKVKGVLFS*AVLPPC
Trigger: ACATGGAGGAAGGACAGCCAATGAGAACAACACACC...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTTGTCTCCTGTGACCTaGACTGAAGGTTTTATAGTC +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLSPVT*TEGFIV
Trigger: GACTATAAAACCTTCAGTCAAGGTCACAGGAGACAA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATTGTCTCCTGTGACCTaGACTGAAGGTTTTATAGTC +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRLSPVT*TEGFIV
Trigger: GACTATAAAACCTTCAGTCAAGGTCACAGGAGACAA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCGGTGTGTTTTTCCCTTaGGTGCATATGGTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PVSRTDEGLILVTVSILCGVFFP*VHMVFS
Trigger: AGAGAAGACCATATGCACCAAAGGGAAAAACACACC...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS TCA 90 bp CTCATGGATTTCTGTAGATTTAGGGAGCTCTGGAGGTCTTTGTCCTaGATGCAGAACAATGTGATCAAAAGGGATACTATAAACAAGGCC +
Preference number: 5 (lower is better)
Translates to: LMDFCRFRELWRSLS*MQNNVIKRDTINKA
Trigger: GGCCTTGTTTATAGTATCCCTTTTGATCACATTGTTCTGCATTCAGGACAAAGACCTCCAGAGCTCCCTAAATCTACAGAAATCCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCGAGTTGCCTGTAGGCTaGTCAGTTGGCTTAGAATGG +
Preference number: 5 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFELPVG*SVGLEW
Trigger: CCATTCTAAGCCAACTGACAAGCCTACAGGCAACTC...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCTCTATAGTTTTGGAGTaGCCTGTAGGCTTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: PVSRTDEGLILVTVSILCSIVLE*PVGLSV
Trigger: AACTGACAAGCCTACAGGCAACTCCAAAACTATAGA...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAATTTTCTTGTTACCGTaGATTTGCCTGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRIFLLP*ICLLWT
Trigger: AGTCCACAACAGGCAAATCAACGGTAACAAGAAAAT...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTATGTGAGCTGGTACTaGTCTTATCCAAAGTACTCA +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNYVSWY*SYPKYS
Trigger: TGAGTACTTTGGATAAGACAAGTACCAGCTCACATA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATATGTGAGCTGGTACTaGTCTTATCCAAAGTACTCA +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRYVSWY*SYPKYS
Trigger: TGAGTACTTTGGATAAGACAAGTACCAGCTCACATA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp CCAGTTTCAAGAACAGATGAAGGGTTAATACTGGTAACCGTCAGTATTCTCTGCTGTCTGAGGCAACTGTaGTTCTGGAATCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: PVSRTDEGLILVTVSILCCLRQL*FWNLQF
Trigger: AAACTGAAGATTCCAGAACAACAGTTGCCTCAGACA...GCAGAGAATACTGACGGTTACCAGTATTAACCCTTCATCTGTTCTTGAAACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAATCATCCTCTGCATCATaGTACTGGGTGTTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: TIIIILLFPLYPISNKVKSSSAS*YWVFWV
Trigger: AACCCAGAACACCCAGTACAATGATGCAGAGGATGA...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTGCAGATGAGGTGATCTaGTCATTGGGTGATGTGGTC +
Preference number: 5 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLADEVI*SLGDVV
Trigger: GACCACATCACCCAATGACAAGATCACCTCATCTGC...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAACCAAGAAGCTTTCATTaGACAAGAGTAGCGCTGGCT +
Preference number: 5 (lower is better)
Translates to: TIIIILLFPLYPISNKVKPRSFH*TRVALA
Trigger: AGCCAGCGCTACTCTTGTCAAATGAAAGCTTCTTGG...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS-3UTR CAA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAATTGTGGTCTATAGTTTaGGAGTTGCCTGTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: TIIIILLFPLYPISNKVKLWSIV*ELPVGL
Trigger: CAAGCCTACAGGCAACTCCAAAACTATAGACCACAA...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TTAATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGATTATCTGTAGAGCTTTaGTGGTCTATAGTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: LILVTVSILCPSCSPGNRLSVEL*WSIVLE
Trigger: CTCCAAAACTATAGACCACAAAAGCTCTACAGATAA...TCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp ATACTGGTAACCGTCAGTATTCTCTGCCCTTCCTGTAGTCCCGGAAATAGAAATTTATCTGTAGAGCTTTaGTGGTCTATAGTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: ILVTVSILCPSCSPGNRNLSVEL*WSIVLE
Trigger: CTCCAAAACTATAGACCACAAAAGCTCTACAGATAA...ATTTCTATTTCCGGGACTACAGGAAGGGCAGAGAATACTGACGGTTACCAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCTCATCCTCTGCATCATaGTACTGGGTGTTCTGGGTT +
Preference number: 5 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFSSSAS*YWVFWV
Trigger: AACCCAGAACACCCAGTACAATGATGCAGAGGATGA...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCAAACTTACACCCTCCTaGCTTATCACCTCATTCCCC +
Preference number: 5 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFKLTPS*LITSFP
Trigger: GGGGAATGAGGTGATAAGCAAGGAGGGTGTAAGTTT...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTAGCTACAGCTGGCTTTaGGTGGAAGAGACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLSYSWL*VEETGK
Trigger: TTTTCCTGTCTCTTCCACCAAAAGCCAGCTGTAGCT...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCAGCTACAGCTGGCTTTaGGTGGAAGAGACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFSYSWL*VEETGK
Trigger: TTTTCCTGTCTCTTCCACCAAAAGCCAGCTGTAGCT...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCGAGGTGATCTTGTCATaGGGTGATGTGGTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFEVILS*GDVVLS
Trigger: AGAAAGGACCACATCACCCAATGACAAGATCACCTC...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCGTTGCAGTGGCGTTTTaGCTCATGGATTTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFVAVAF*LMDFCR
Trigger: TCTACAGAAATCCATGAGCAAAAACGCCACTGCAAC...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCGTTTTTGTCAGGAGCTaGTCTGAGGCAACTGTTGTT +
Preference number: 5 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFVFVRS*SEATVV
Trigger: AACAACAGTTGCCTCAGACAAGCTCCTGACAAAAAC...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCGTAGTAGTGAGAGATTaGTCTCCTGTGACCTTGACT +
Preference number: 5 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFVVVRD*SPVTLT
Trigger: AGTCAAGGTCACAGGAGACAAATCTCTCACTACTAC...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp TCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTCGGTGTGTTTTTCCCTTaGGTGCATATGGTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SDHYLLQRMSARIIHSFFGVFFP*VHMVFS
Trigger: AGAGAAGACCATATGCACCAAAGGGAAAAACACACC...GAAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAAATTTTCTTGTTACCGTaGATTTGCCTGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: TIIIILLFPLYPISNKVKIFLLP*ICLLWT
Trigger: AGTCCACAACAGGCAAATCAACGGTAACAAGAAAAT...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp ACTATCATCATCATTCTCCTTTTCCCCCTCTACCCAATCAGTAATAAGGTGAAATTATCTGTAGAGCTTTaGTGGTCTATAGTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: TIIIILLFPLYPISNKVKLSVEL*WSIVLE
Trigger: CTCCAAAACTATAGACCACAAAAGCTCTACAGATAA...TTTCACCTTATTACTGATTGGGTAGAGGGGGAAAAGGAGAATGATGATGATAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS-3UTR CAA 90 bp CTCAGACCATTACCTTCTACAGAGAATGTCTGCTCGTATTATTCATTCTTTCTTTTATCTGTAGAGCTTTaGTGGTCTATAGTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: LRPLPSTENVCSYYSFFLLSVEL*WSIVLE
Trigger: CTCCAAAACTATAGACCACAAAAGCTCTACAGATAA...AAGAAAGAATGAATAATACGAGCAGACATTCTCTGTAGAAGGTAATGGTCTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000636043.1
CDS CCA 72 bp AGGCAGCACTGGAGGCCAAAGGCGGAGCAGAGGCTGTaGACCGGCTGGGCCATGTCGGAGCTGGGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: RQHWRPKAEQRL*TGWAMSELGGC
Trigger: GCAGCCACCCAGCTCCGACATGGCCCAGCCGGTCCACAGCCTCTGCTCCGCCTTTGGCCTCCAGTGCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462446.6
ENST00000548730.1
CDS CCA 72 bp TGGAGGCCAAAGGCGGAGCAGAGGCTGTGGACCGGCTaGGCCATGTCGGAGCTGGGTGGCTGCTTGGGGACC +
Preference number: 6 (lower is better)
Translates to: WRPKAEQRLWTG*AMSELGGCLGT
Trigger: GGTCCCCAAGCAGCCACCCAGCTCCGACATGGCCCAGCCGGTCCACAGCCTCTGCTCCGCCTTTGGCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548730.1
CDS CCA 72 bp AAGAGCCAGGGCTGGGCGCCTACTCCAAGATCACCGTaGGGAAGGGATCTGGCCCATGCCAAGATTCTGCTG +
Preference number: 6 (lower is better)
Translates to: KSQGWAPTPRSP*GRDLAHAKILL
Trigger: CAGCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACGGTGATCTTGGAGTAGGCGCCCAGCCCTGGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS GCA 72 bp TACTCCAAGATCACCGTGGGGAAGGGATCTGGCCCATaGCAAGATTCTGCTGCTCCATCAGGTAGACCGGGT +
Preference number: 6 (lower is better)
Translates to: YSKITVGKGSGP*QDSAAPSGRPG
Trigger: ACCCGGTCTACCTGATGGAGCAGCAGAATCTTGGCATGGGCCAGATCCCTTCCCCACGGTGATCTTGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS CCA 72 bp GAATTGGGGCCACCCTCATCCTCTGCATCATTGTACTaGGTGTTCTGGGTTAGTGTGCGGCGTGTCCGCATC +
Preference number: 6 (lower is better)
Translates to: ELGPPSSSASLY*VFWVSVRRVRI
Trigger: GATGCGGACACGCCGCACACTAACCCAGAACACCCAGTACAATGATGCAGAGGATGAGGGTGGCCCCAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS CCA 72 bp GATTCTGCTGCTCCATCAGGTAGACCGGGTAGGAATTaGGGCCACCCTCATCCTCTGCATCATTGTACTGGG +
Preference number: 6 (lower is better)
Translates to: DSAAPSGRPGRN*GHPHPLHHCTG
Trigger: CCCAGTACAATGATGCAGAGGATGAGGGTGGCCCCAATTCCTACCCGGTCTACCTGATGGAGCAGCAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS CCA 72 bp ACCAGCACAGTGTCCATGGCACCAGTTGAAGTGTGTTaGCCAGGCCCATCTCCCAGGCTCTTTAAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: TSTVSMAPVEVC*PGPSPRLFKGS
Trigger: AGAGCCTTTAAAGAGCCTGGGAGATGGGCCTGGCCAACACACTTCAACTGGTGCCATGGACACTGTGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS CCA 72 bp ACAGAGCGCTGGTTCCGGATCATTGGGTCTTTCCCTTaGTTGCTGGAGTTTTCTTCAGAAGTGGGAGGAGCC +
Preference number: 6 (lower is better)
Translates to: TERWFRIIGSFP*LLEFSSEVGGA
Trigger: GGCTCCTCCCACTTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CCA 72 bp TGTGTGGTAGTGGAGTCAGCAGGATCAACAGAGCGCTaGTTCCGGATCATTGGGTCTTTCCCTTGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: CVVVESAGSTER*FRIIGSFPWLL
Trigger: CAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGCTCTGTTGATCCTGCTGACTCCACTACCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 72 bp GAGCGCTGGTTCCGGATCATTGGGTCTTTCCCTTGGTaGCTGGAGTTTTCTTCAGAAGTGGGAGGAGCCTCA +
Preference number: 6 (lower is better)
Translates to: ERWFRIIGSFPW*LEFSSEVGGAS
Trigger: TGAGGCTCCTCCCACTTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 72 bp AACAGAGCGCTGGTTCCGGATCATTGGGTCTTTCCCTaGGTTGCTGGAGTTTTCTTCAGAAGTGGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: NRALVPDHWVFP*VAGVFFRSGRS
Trigger: GCTCCTCCCACTTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGCTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 90 bp AGCAGGATCAACAGAGCGCTGGTTCCGGATCATTGGGTCTTTCCCTaGGTTGCTGGAGTTTTCTTCAGAAGTGGGAGGAGCCTCATGATT +
Preference number: 6 (lower is better)
Translates to: SRINRALVPDHWVFP*VAGVFFRSGRSLMI
Trigger: AATCATGAGGCTCCTCCCACTTCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGCTCTGTTGATCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS TCA 72 bp CACCAGGACCACAATAACTATGGCCCATGCAGGGAATaGATCATTCTCTCCCATCTGTCCAGCGTGGATACC +
Preference number: 6 (lower is better)
Translates to: HQDHNNYGPCRE*IILSHLSSVDT
Trigger: GGTATCCACGCTGGACAGATGGGAGAGAATGATTCATTCCCTGCATGGGCCATAGTTATTGTGGTCCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS GCA 72 bp CCTCTGCATCATTGTACTGGGTGTTCTGGGTTAGTGTaGGGCGTGTCCGCATCATATAGGAGACCAAGAAGA +
Preference number: 6 (lower is better)
Translates to: PLHHCTGCSGLV*GVSASYRRPRR
Trigger: TCTTCTTGGTCTCCTATATGATGCGGACACGCCGCACACTAACCCAGAACACCCAGTACAATGATGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS CCA 72 bp TTGGAGTTGCCTGTAGGCTTGTCAGTTGGCTTAGAATaGCGTGTGGTGTTGCAGTGGCGTTTTTGCTCATGG +
Preference number: 6 (lower is better)
Translates to: LELPVGLSVGLE*RVVLQWRFCSW
Trigger: CCATGAGCAAAAACGCCACTGCAACACCACACGCCATTCTAAGCCAACTGACAAGCCTACAGGCAACTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CCA 72 bp GTCAGCAGGATCAACAGAGCGCTGGTTCCGGATCATTaGGTCTTTCCCTTGGTTGCTGGAGTTTTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: VSRINRALVPDH*VFPLVAGVFFR
Trigger: TCTGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGCTCTGTTGATCCTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 72 bp AGTCAGCAGGATCAACAGAGCGCTGGTTCCGGATCATaGGGTCTTTCCCTTGGTTGCTGGAGTTTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: SQQDQQSAGSGS*GLSLGCWSFLQ
Trigger: CTGAAGAAAACTCCAGCAACCAAGGGAAAGACCCAATGATCCGGAACCAGCGCTCTGTTGATCCTGCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 90 bp GAGTTGCCTGTAGGCTTGTCAGTTGGCTTAGAATGGCGTGTGGTGTaGCAGTGGCGTTTTTGCTCATGGATTTCTGTAGATTTAGGGAGC +
Preference number: 6 (lower is better)
Translates to: ELPVGLSVGLEWRVV*QWRFCSWISVDLGS
Trigger: GCTCCCTAAATCTACAGAAATCCATGAGCAAAAACGCCACTGCAACACCACACGCCATTCTAAGCCAACTGACAAGCCTACAGGCAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 90 bp CTTGTCAGTTGGCTTAGAATGGCGTGTGGTGTTGCAGTGGCGTTTTaGCTCATGGATTTCTGTAGATTTAGGGAGCTCTGGAGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: LVSWLRMACGVAVAF*LMDFCRFRELWRSL
Trigger: CAAAGACCTCCAGAGCTCCCTAAATCTACAGAAATCCATGAGCAAAAACGCCACTGCAACACCACACGCCATTCTAAGCCAACTGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 90 bp TCTGTAGAGCTTTTGTGGTCTATAGTTTTGGAGTTGCCTGTAGGCTaGTCAGTTGGCTTAGAATGGCGTGTGGTGTTGCAGTGGCGTTTT +
Preference number: 6 (lower is better)
Translates to: SVELLWSIVLELPVG*SVGLEWRVVLQWRF
Trigger: AAAACGCCACTGCAACACCACACGCCATTCTAAGCCAACTGACAAGCCTACAGGCAACTCCAAAACTATAGACCACAAAAGCTCTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 72 bp GTAGGCTTGTCAGTTGGCTTAGAATGGCGTGTGGTGTaGCAGTGGCGTTTTTGCTCATGGATTTCTGTAGAT +
Preference number: 6 (lower is better)
Translates to: VGLSVGLEWRVV*QWRFCSWISVD
Trigger: ATCTACAGAAATCCATGAGCAAAAACGCCACTGCAACACCACACGCCATTCTAAGCCAACTGACAAGCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 72 bp CTTTTGTGGTCTATAGTTTTGGAGTTGCCTGTAGGCTaGTCAGTTGGCTTAGAATGGCGTGTGGTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: LLWSIVLELPVG*SVGLEWRVVLQ
Trigger: CTGCAACACCACACGCCATTCTAAGCCAACTGACAAGCCTACAGGCAACTCCAAAACTATAGACCACAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS GCA 72 bp CCCAGTTTTCTGATATTCTTGGAATGTAGTAGCACCTaGCCCCCAAGAAGCTTTCATTTGACAAGAGTAGCG +
Preference number: 6 (lower is better)
Translates to: PSFLIFLECSST*PPRSFHLTRVA
Trigger: CGCTACTCTTGTCAAATGAAAGCTTCTTGGGGGGCAGGTGCTACTACATTCCAAGAATATCAGAAAACTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636043.1
CDS CCA 72 bp GCAGGGAATGAATCATTCTCTCCCATCTGTCCAGCGTaGATACCTTTCTGTGAGCCATCTTTATTGAGGTAT +
Preference number: 6 (lower is better)
Translates to: AGNESFSPICPA*IPFCEPSLLRY
Trigger: ATACCTCAATAAAGATGGCTCACAGAAAGGTATCCACGCTGGACAGATGGGAGAGAATGATTCATTCCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS TCA 72 bp TGTGATCAAAAGGGATACTATAAACAAGGCCTGGAGTaGGGGGAAATATGTGATCGGATGTTGAGAGTTCCC +
Preference number: 6 (lower is better)
Translates to: CDQKGYYKQGLE*GEICDRMLRVP
Trigger: GGGAACTCTCAACATCCGATCACATATTTCCCCTCACTCCAGGCCTTGTTTATAGTATCCCTTTTGATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 72 bp TTCTGTGAGCCATCTTTATTGAGGTATGGATGGCTCTaGTTTCCTGTGGCTTCTGATGTGATAGAACTCAGC +
Preference number: 6 (lower is better)
Translates to: FCEPSLLRYGWL*FPVASDVIELS
Trigger: GCTGAGTTCTATCACATCAGAAGCCACAGGAAACAAGAGCCATCCATACCTCAATAAAGATGGCTCACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416153.2
ENST00000614587.1
CDS CAA 90 bp TGGATACCTTTCTGTGAGCCATCTTTATTGAGGTATGGATGGCTCTaGTTTCCTGTGGCTTCTGATGTGATAGAACTCAGCTTCGTTCTA +
Preference number: 6 (lower is better)
Translates to: WIPFCEPSLLRYGWL*FPVASDVIELSFVL
Trigger: TAGAACGAAGCTGAGTTCTATCACATCAGAAGCCACAGGAAACAAGAGCCATCCATACCTCAATAAAGATGGCTCACAGAAAGGTATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416153.2
ENST00000614587.1
CDS CAA 72 bp TTATCTGTAGAGCTTTTGTGGTCTATAGTTTTGGAGTaGCCTGTAGGCTTGTCAGTTGGCTTAGAATGGCGT +
Preference number: 6 (lower is better)
Translates to: LSVELLWSIVLE*PVGLSVGLEWR
Trigger: ACGCCATTCTAAGCCAACTGACAAGCCTACAGGCAACTCCAAAACTATAGACCACAAAAGCTCTACAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 72 bp GAAGAGGTAGTAGTGAGAGATTTGTCTCCTGTGACCTaGACTGAAGGTTTTATAGTCTTTGTGACTGCTGCT +
Preference number: 6 (lower is better)
Translates to: EEVVVRDLSPVT*TEGFIVFVTAA
Trigger: AGCAGCAGTCACAAAGACTATAAAACCTTCAGTCAAGGTCACAGGAGACAAATCTCTCACTACTACCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000304311.3
ENST00000414703.2
ENST00000416153.2
ENST00000448092.2
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000614587.1
ENST00000636043.1
CDS TCA 72 bp TTCTGTAGATTTAGGGAGCTCTGGAGGTCTTTGTCCTaGATGCAGAACAATGTGATCAAAAGGGATACTATA +
Preference number: 6 (lower is better)
Translates to: FCRFRELWRSLS*MQNNVIKRDTI
Trigger: TATAGTATCCCTTTTGATCACATTGTTCTGCATTCAGGACAAAGACCTCCAGAGCTCCCTAAATCTACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CCA 72 bp TATGTGAGCTGGTACTTGTCTTATCCAAAGTACTCATaGACTTTTCCAAAGGTCTTCCAGTTTTATCTGATT +
Preference number: 6 (lower is better)
Translates to: YVSWYLSYPKYS*TFPKVFQFYLI
Trigger: AATCAGATAAAACTGGAAGACCTTTGGAAAAGTCCATGAGTACTTTGGATAAGACAAGTACCAGCTCACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1
CDS CAA 72 bp AAGGTCTTCCAGTTTTATCTGATTTTCTTGTTACCGTaGATTTGCCTGTTGTGGACTTACGACAGTTTATTT +
Preference number: 6 (lower is better)
Translates to: KVFQFYLIFLLP*ICLLWTYDSLF
Trigger: AAATAAACTGTCGTAAGTCCACAACAGGCAAATCAACGGTAACAAGAAAATCAGATAAAACTGGAAGACCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000304311.3
ENST00000462446.6
ENST00000546848.1
ENST00000547331.1
ENST00000548730.1
ENST00000614587.1
ENST00000636043.1