RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MUC17 (Homo sapiens)

Ensembl gene IDs: ENSG00000169876

Ensembl transcript IDs: ENST00000306151.9, ENST00000379439.3, ENST00000470303.1

Found 400 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGCATCAGGAGAGCTACCAGGATGATCAGCATCAGCACGACCCCTaGCCCCACGAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTT +
Preference number: 1 (lower is better)
Translates to: EHQESYQDDQHQHDP*PHEAVHQTLLGALV
Trigger: AACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTCGTGGGGGCAGGGGTCGTGCTGATGCTGATCATCCTGGTAGCTCTCCTGATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR CCA 90 bp GTTCTTGGAGACACTGAAGCCAGGCTCACAGGGGCTGATGCAGTATaGCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTCCATATTC +
Preference number: 1 (lower is better)
Translates to: VLGDTEARLTGADAV*LLVPVLHYEVVSIF
Trigger: GAATATGGAGACTACTTCGTAGTGGAGTACCGGGACCAGAAGCCATACTGCATCAGCCCCTGTGAGCCTGGCTTCAGTGTCTCCAAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR CCA 90 bp ACCCGCCTGCTCAGCCAGATCAACCAAATCAATCCTGGCGATCAATaGGGTGAAAGATGTTGCAGTCAGAGTACCCTCAAATCTGGAGCG +
Preference number: 1 (lower is better)
Translates to: TRLLSQINQINPGDQ*GERCCSQSTLKSGA
Trigger: CGCTCCAGATTTGAGGGTACTCTGACTGCAACATCTTTCACCCCATTGATCGCCAGGATTGATTTGGTTGATCTGGCTGAGCAGGCGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR GCA 90 bp CCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCACTaGTGTCTCTCCTCTTTCTCCTTGGTAAGTACAGGGCTTGTTTCC +
Preference number: 1 (lower is better)
Translates to: PIGASTGFYLRISQH*CLSSFSLVSTGLVS
Trigger: GGAAACAAGCCCTGTACTTACCAAGGAGAAAGAGGAGAGACAGCAGTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR TCA 90 bp CCTGCTCAGCCAGATCAACCAAATCAATCCTGGCGATCAATGGGGTaGAAGATGTTGCAGTCAGAGTACCCTCAAATCTGGAGCGTCTTT +
Preference number: 1 (lower is better)
Translates to: PAQPDQPNQSWRSMG*KMLQSEYPQIWSVF
Trigger: AAAGACGCTCCAGATTTGAGGGTACTCTGACTGCAACATCTTTCACCCCATTGATCGCCAGGATTGATTTGGTTGATCTGGCTGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR TCA 90 bp CTGGGATCTCCTCACTCCCAGACTTCTCAGCTCCATGCCTTAAAATaGTGTCGTCATTACCTGAGGCCTCTGAATTCGGATCTTTGTTTC +
Preference number: 1 (lower is better)
Translates to: LGSPHSQTSQLHALK*CRHYLRPLNSDLCF
Trigger: GAAACAAAGATCCGAATTCAGAGGCCTCAGGTAATGACGACATCATTTTAAGGCATGGAGCTGAGAAGTCTGGGAGTGAGGAGATCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR TCA 90 bp CTTGGTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTaGGTTCCCATGGAAGGCTCTCAATGGGAAAATGCTCCACCAAGC +
Preference number: 1 (lower is better)
Translates to: LGKYRACFLYLQWEH*VPMEGSQWENAPPS
Trigger: GCTTGGTGGAGCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR TCA 90 bp CTCAAATCTGGAGCGTCTTTGAAAAATGAGCAGGAAAGCCTAGCCTaGTATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTG +
Preference number: 1 (lower is better)
Translates to: LKSGASLKNEQESLA*YHDKPIGASTGFYL
Trigger: CAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATATCAGGCTAGGCTTTCCTGCTCATTTTTCAAAGACGCTCCAGATTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR CCA 90 bp TTTCAGGGTCTATGTGTCTCAAGGAGGGCTGGAAATTACTATAGATaGACTCCAGGTGGATGGAATCATCATCTTGGCAGATGTCAAAGC +
Preference number: 1 (lower is better)
Translates to: FQGLCVSRRAGNYYR*TPGGWNHHLGRCQS
Trigger: GCTTTGACATCTGCCAAGATGATGATTCCATCCACCTGGAGTCCATCTATAGTAATTTCCAGCCCTCCTTGAGACACATAGACCCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR GCA 90 bp CAGATCAACCAAATCAATCCTGGCGATCAATGGGGTGAAAGATGTTaGAGTCAGAGTACCCTCAAATCTGGAGCGTCTTTGAAAAATGAG +
Preference number: 1 (lower is better)
Translates to: QINQINPGDQWGERC*SQSTLKSGASLKNE
Trigger: CTCATTTTTCAAAGACGCTCCAGATTTGAGGGTACTCTGACTGCAACATCTTTCACCCCATTGATCGCCAGGATTGATTTGGTTGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR CCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCATGCAGTATGGCTTCTaGTCCCGGTACTCCACTACG +
Preference number: 2 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGMQYGF*SRYSTT
Trigger: CGTAGTGGAGTACCGGGACCAGAAGCCATACTGCAT...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR TCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCCCACGGGTTTCTATTTaGGAATCTCCCAGCACTGCT +
Preference number: 2 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSPRVSI*ESPSTA
Trigger: AGCAGTGCTGGGAGATTCTCAAATAGAAACCCGTGG...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR GCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCCTCTCAATGGGAAAATaGTCCACCAAGCTTAGCCGG +
Preference number: 2 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSLSMGK*STKLSR
Trigger: CCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAG...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR TCA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTCTCCATGCCTTAAAATaGTGTCGTCATTACCTGAGG +
Preference number: 2 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSLHALK*CRHYLR
Trigger: CCTCAGGTAATGACGACATCATTTTAAGGCATGGAG...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR CCA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTAATCCTGGCGATCAATaGGGTGAAAGATGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSNPGDQ*GERCCS
Trigger: ACTGCAACATCTTTCACCCCATTGATCGCCAGGATT...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR CCA 90 bp TTTTGCCGTTTCACCTCTCTCTTGGAGCGGAAAACGAGCATCAGGAGAGCTACCGGGGCTGATGCAGTATaGCTTCTGGTCCCGGTACTC +
Preference number: 2 (lower is better)
Translates to: FCRFTSLLERKTSIRRATGADAV*LLVPVL
Trigger: GAGTACCGGGACCAGAAGCCATACTGCATCAGCCCC...GGTAGCTCTCCTGATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAACGGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR TCA 90 bp TTTTGCCGTTTCACCTCTCTCTTGGAGCGGAAAACGAGCATCAGGAGAGCTACCGTCACGCAGAGGCACTaGGGTCCACTTAGAGACATC +
Preference number: 2 (lower is better)
Translates to: FCRFTSLLERKTSIRRATVTQRH*GPLRDI
Trigger: GATGTCTCTAAGTGGACCTCAGTGCCTCTGCGTGAC...GGTAGCTCTCCTGATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAACGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR CCA 90 bp CATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTAATCCTGGCGATCAATaGGGTGAAAGATGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: HAVQCPRGHGCKQRVEGANPGDQ*GERCCS
Trigger: ACTGCAACATCTTTCACCCCATTGATCGCCAGGATT...AGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR CCA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCACCAGTGAGTTTCCGTaGTCACGCAGAGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVTSEFP*SRRGTE
Trigger: CTCAGTGCCTCTGCGTGACCACGGAAACTCACTGGT...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR TCA 90 bp CATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCACCCACGGGTTTCTATTTaGGAATCTCCCAGCACTGCT +
Preference number: 2 (lower is better)
Translates to: HDKPIGASTGFYLRISQHPRVSI*ESPSTA
Trigger: AGCAGTGCTGGGAGATTCTCAAATAGAAACCCGTGG...GTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR TCA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCTGGCGATCAATGGGGTaGAAGATGTTGCAGTCAGAG +
Preference number: 2 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVWRSMG*KMLQSE
Trigger: CTCTGACTGCAACATCTTTCACCCCATTGATCGCCA...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR TCA 90 bp TGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCGCTGTCCATGGTACTaGACCCGGGCAGATGAGGGG +
Preference number: 2 (lower is better)
Translates to: CTYNGNIEFPWKALNGKMRCPWY*TRADEG
Trigger: CCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCG...CATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR GCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTCCAGACTCTTCTGGGTaGCCTGGTTACAGGTCTCCC +
Preference number: 2 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCPDSSG*PGYRSP
Trigger: GGGAGACCTGTAACCAGGGCACCCAGAAGAGTCTGG...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR CCA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGTTTCACCTCTCTCTTaGAGCGGAAAACGAGCATCA +
Preference number: 2 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVVSPLS*SGKRAS
Trigger: TGATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAAC...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR GCA 90 bp GGAGGGCTGGAAATTACTATAGATGGACTCCAGGTGGATGGAATCATCATCTTGGAGACATCTGGCACTTaGCGAGGTTACAGTTCTTGG +
Preference number: 2 (lower is better)
Translates to: GGLEITIDGLQVDGIIILETSGT*RGYSSW
Trigger: CCAAGAACTGTAACCTCGGCAAGTGCCAGATGTCTC...CAAGATGATGATTCCATCCACCTGGAGTCCATCTATAGTAATTTCCAGCCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR CCA 90 bp GAATTCGGATCTTTGTTTCAGGGTCTATGTGTCTCAAGGAGGGCTGGAAATTACTACACCAGACTCTTCTaGGTGCCCTGGTTACAGGTC +
Preference number: 2 (lower is better)
Translates to: EFGSLFQGLCVSRRAGNYYTRLF*VPWLQV
Trigger: GACCTGTAACCAGGGCACCCAGAAGAGTCTGGTGTA...GTAATTTCCAGCCCTCCTTGAGACACATAGACCCTGAAACAAAGATCCGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR TCA 90 bp TGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCCTAGCCTGATATCATaGCAAGCCCATTGGAGCGTC +
Preference number: 2 (lower is better)
Translates to: CTYNGNIEFPWKALNGKMPSLIS*QAHWSV
Trigger: GACGCTCCAATGGGCTTGTCATGATATCAGGCTAGG...CATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR TCA 90 bp TGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCTCGTCCTCTTCAACTaGGCATGCAGCTTTAGGAGG +
Preference number: 2 (lower is better)
Translates to: CTYNGNIEFPWKALNGKMLVLFN*ACSFRR
Trigger: CCTCCTAAAGCTGCATGCTCAGTTGAAGAGGACGAG...CATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR GCA 90 bp GAATTCGGATCTTTGTTTCAGGGTCTATGTGTCTCAAGGAGGGCTGGAAATTACCTCTCAATGGGAAAATaGTCCACCAAGCTTAGCCGG +
Preference number: 2 (lower is better)
Translates to: EFGSLFQGLCVSRRAGNYLSMGK*STKLSR
Trigger: CCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAG...GTAATTTCCAGCCCTCCTTGAGACACATAGACCCTGAAACAAAGATCCGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR CCA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCATGGAATCATCATCTTaGCAGATGTCAAAGCCAATG +
Preference number: 2 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVMESSS*QMSKPM
Trigger: CATTGGCTTTGACATCTGCCAAGATGATGATTCCAT...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR TCA 90 bp ACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGTTTACAATGGGAACATTaGGTTCCCATGGAAGGCTCT +
Preference number: 2 (lower is better)
Translates to: TSLSLFGSASREVQIDTCLQWEH*VPMEGS
Trigger: AGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAA...ACAAGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR TCA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAATTACAATGGGAACATTaGGTTCCCATGGAAGGCTCT +
Preference number: 2 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKLQWEH*VPMEGS
Trigger: AGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAA...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR TCA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAAAATCTGGAGCGTCTTTaGAAAATGAGCAGGAAAGCC +
Preference number: 2 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKNLERL*KMSRKA
Trigger: GGCTTTCCTGCTCATTTTTCAAAGACGCTCCAGATT...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR GCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTGACAATCTGTACTTTTaGCGTTTCACCTCTCTCTTG +
Preference number: 2 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCDNLYF*RFTSLL
Trigger: CAAGAGAGAGGTGAAACGGCAAAAGTACAGATTGTC...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR CCA 90 bp ACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGTAACATTGAGTTCCCATaGAAGGCTCTCAATGGGAAA +
Preference number: 2 (lower is better)
Translates to: TSLSLFGSASREVQIDTCNIEFP*KALNGK
Trigger: TTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTT...ACAAGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR TCA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAATGCCACTTGTATAACTaGGACAATCTGTACTTTTGC +
Preference number: 2 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKCHLYN*DNLYFC
Trigger: GCAAAAGTACAGATTGTCTCAGTTATACAAGTGGCA...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR GCA 72 bp GAGAGCTACCAGGATGATCAGCATCAGCACGACCCCTaGCCCCACGAGGCCGTACACCAGACTCTTCTGGGT +
Preference number: 3 (lower is better)
Translates to: ESYQDDQHQHDP*PHEAVHQTLLG
Trigger: ACCCAGAAGAGTCTGGTGTACGGCCTCGTGGGGGCAGGGGTCGTGCTGATGCTGATCATCCTGGTAGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR CAA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATCATGACAAGCCCATaGGAGCGTCCACGGGTTTCT +
Preference number: 3 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSIMTSP*ERPRVS
Trigger: AGAAACCCGTGGACGCTCCAATGGGCTTGTCATGAT...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR CAA 90 bp CATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGGAACATCTCTGAGCTaGTTTGGAAGTGCTAGCAGG +
Preference number: 3 (lower is better)
Translates to: HAVQCPRGHGCKQRVEGAGTSLS*FGSASR
Trigger: CCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC...AGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR CAA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACGTTTCACCTCTCTCTaGGAGCGGAAAACGAGCATC +
Preference number: 3 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVRFTSL*ERKTSI
Trigger: GATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAACG...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR CAA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTATCCACGGGTTTCTATTaGAGAATCTCCCAGCACTGC +
Preference number: 3 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVSTGFY*RISQHC
Trigger: GCAGTGCTGGGAGATTCTCAAATAGAAACCCGTGGA...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR CAA 90 bp GGCTCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACAGAGACATCTGGCACTaGCCGAGGTTACAGTTCTTG +
Preference number: 3 (lower is better)
Translates to: GSQWENAPPSLAGLGSPHRDIWH*PRLQFL
Trigger: CAAGAACTGTAACCTCGGCAAGTGCCAGATGTCTCT...GTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR CAA 90 bp GGCTCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACCTTACAATGGGAACATaGAGTTCCCATGGAAGGCTC +
Preference number: 3 (lower is better)
Translates to: GSQWENAPPSLAGLGSPHLTMGT*SSHGRL
Trigger: GAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAG...GTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR TCA 72 bp GGAGCGTCTTTGAAAAATGAGCAGGAAAGCCTAGCCTaGTATCATGACAAGCCCATTGGAGCGTCCACGGGT +
Preference number: 3 (lower is better)
Translates to: GASLKNEQESLA*YHDKPIGASTG
Trigger: ACCCGTGGACGCTCCAATGGGCTTGTCATGATATCAGGCTAGGCTTTCCTGCTCATTTTTCAAAGACGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR TCA 72 bp TCTATCAGAGAAGGTCGTCCTCTCGTCCTCTTCAACTaGGCATGCAGCTTTAGGAGGGACACATATGGGGCA +
Preference number: 3 (lower is better)
Translates to: SIREGRPLVLFN*ACSFRRDTYGA
Trigger: TGCCCCATATGTGTCCCTCCTAAAGCTGCATGCTCAGTTGAAGAGGACGAGAGGACGACCTTCTCTGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR GCA 72 bp GCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCACTaGTGTCTCTCCTCTTTCTCCTTGGTAAGTACAGGG +
Preference number: 3 (lower is better)
Translates to: ASTGFYLRISQH*CLSSFSLVSTG
Trigger: CCCTGTACTTACCAAGGAGAAAGAGGAGAGACAGCAGTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR TCA 72 bp ATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTaGGAATCTCCCAGCACTGCTGTCTCTCCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: MTSPLERPRVSI*ESPSTAVSPLS
Trigger: AGAAAGAGGAGAGACAGCAGTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR CCA 72 bp GAGACAATCTGTACTTTTGCCGTTTCACCTCTCTCTTaGAGCGGAAAACGAGCATCAGGAGAGCTACCAGGA +
Preference number: 3 (lower is better)
Translates to: ETICTFAVSPLS*SGKRASGELPG
Trigger: TCCTGGTAGCTCTCCTGATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAACGGCAAAAGTACAGATTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR TCA 72 bp CCTCACTCCCAGACTTCTCAGCTCCATGCCTTAAAATaGTGTCGTCATTACCTGAGGCCTCTGAATTCGGAT +
Preference number: 3 (lower is better)
Translates to: PHSQTSQLHALK*CRHYLRPLNSD
Trigger: ATCCGAATTCAGAGGCCTCAGGTAATGACGACATCATTTTAAGGCATGGAGCTGAGAAGTCTGGGAGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR-3UTR CAA 90 bp ACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGTATCATGACAAGCCCATaGGAGCGTCCACGGGTTTCT +
Preference number: 3 (lower is better)
Translates to: TSLSLFGSASREVQIDTCIMTSP*ERPRVS
Trigger: AGAAACCCGTGGACGCTCCAATGGGCTTGTCATGAT...ACAAGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR TCA 72 bp CCAGATCAACCAAATCAATCCTGGCGATCAATGGGGTaGAAGATGTTGCAGTCAGAGTACCCTCAAATCTGG +
Preference number: 3 (lower is better)
Translates to: PDQPNQSWRSMG*KMLQSEYPQIW
Trigger: CCAGATTTGAGGGTACTCTGACTGCAACATCTTTCACCCCATTGATCGCCAGGATTGATTTGGTTGATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR TCA 72 bp GCTGGTCCACTGTCCTCTTCTTGCCACTTGTATAACTaGGACAATCTGTACTTTTGCCGTTTCACCTCTCTC +
Preference number: 3 (lower is better)
Translates to: AGPLSSSCHLYN*DNLYFCRFTSL
Trigger: GAGAGAGGTGAAACGGCAAAAGTACAGATTGTCTCAGTTATACAAGTGGCAAGAAGAGGACAGTGGACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR CCA 72 bp CTCAGCCAGATCAACCAAATCAATCCTGGCGATCAATaGGGTGAAAGATGTTGCAGTCAGAGTACCCTCAAA +
Preference number: 3 (lower is better)
Translates to: LSQINQINPGDQ*GERCCSQSTLK
Trigger: TTTGAGGGTACTCTGACTGCAACATCTTTCACCCCATTGATCGCCAGGATTGATTTGGTTGATCTGGCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR-3UTR CAA 90 bp TGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGTCCACGGGTTTCTATTaGAGAATCTCCCAGCACTGC +
Preference number: 3 (lower is better)
Translates to: CTYNGNIEFPWKALNGKMSTGFY*RISQHC
Trigger: GCAGTGCTGGGAGATTCTCAAATAGAAACCCGTGGA...CATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR CCA 72 bp GTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATaGAAGGCTCTCAATGGGAAAATGCTCCACCAAGCT +
Preference number: 3 (lower is better)
Translates to: VSCTYNGNIEFP*KALNGKMLHQA
Trigger: AGCTTGGTGGAGCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR CCA 72 bp CTATGTGTCTCAAGGAGGGCTGGAAATTACTATAGATaGACTCCAGGTGGATGGAATCATCATCTTGGCAGA +
Preference number: 3 (lower is better)
Translates to: LCVSRRAGNYYR*TPGGWNHHLGR
Trigger: TCTGCCAAGATGATGATTCCATCCACCTGGAGTCCATCTATAGTAATTTCCAGCCCTCCTTGAGACACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
3UTR TCA 72 bp TACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTaGGTTCCCATGGAAGGCTCTCAATGGGAAAATGCT +
Preference number: 3 (lower is better)
Translates to: YRACFLYLQWEH*VPMEGSQWENA
Trigger: AGCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp ACGAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTACAGGTCTCCCCACTGCATCAGCACGACCCCTaGCCCCACGAGGCCGTACAC +
Preference number: 4 (lower is better)
Translates to: TRPYTRLFWVPWLQVSPLHQHDP*PHEAVH
Trigger: GTGTACGGCCTCGTGGGGGCAGGGGTCGTGCTGATG...CAGTGGGGAGACCTGTAACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCCGCTGTCCATGGTACTaGACCCGGGCAGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGRCPWY*TRADEG
Trigger: CCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCG...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp CATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTCAGCGCCATGGTCCCTaGCCTTGGCATCGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HAVQCPRGHGCKQRVEGAQRHGP*PWHRSS
Trigger: AGAGCTCCGATGCCAAGGCCAGGGACCATGGCGCTG...AGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp ACCCCTGCCCCCACGAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTACAGGGAGGTGTACTGGAGTaGGCAGGAGGAAATGTAGGT +
Preference number: 4 (lower is better)
Translates to: TPAPTRPYTRLFWVPWLQGGVLE*AGGNVG
Trigger: ACCTACATTTCCTCCTGCTCACTCCAGTACACCTCC...CTGTAACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTCGTGGGGGCAGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTCAGGCTCACAGGGGCTaGTGCAGTATGGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSQAHRG*CSMASG
Trigger: ACCAGAAGCCATACTGCATCAGCCCCTGTGAGCCTG...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCGGAGAGCTACCAGGATaGTCAGCATCAGCACGACCC +
Preference number: 4 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGGELPG*SASARP
Trigger: GGGTCGTGCTGATGCTGATCATCCTGGTAGCTCTCC...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACGCTGTCCATGGTACTaGACCCGGGCAGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVRCPWY*TRADEG
Trigger: CCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCG...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp CATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTCGTCCCCTTGGGAGATaGACCCTCCTCCATCCCACA +
Preference number: 4 (lower is better)
Translates to: HAVQCPRGHGCKQRVEGARPLGR*TLLHPT
Trigger: TGTGGGATGGAGGAGGGTGCATCTCCCAAGGGGACG...AGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCCATCAGCACGACCCCTaGCCCCACGAGGCCGTACAC +
Preference number: 4 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFHQHDP*PHEAVH
Trigger: GTGTACGGCCTCGTGGGGGCAGGGGTCGTGCTGATG...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTCCGTGGGGAAGGAAGTaGTCCGTGTGCTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSPWGRK*SVCWVL
Trigger: CAAAACCCAGCACACGGACCACTTCCTTCCCCACGG...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CACGACCCCTGCCCCCACGAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTTCCTTCTGTGATCACTaGTACAGATATGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: HDPCPHEAVHQTLLGALVSFCDH*YRYGGG
Trigger: GCCACCACCATATCTGTATCAGTGATCACAGAAGGA...AACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTCGTGGGGGCAGGGGTCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp ACCCCTGCCCCCACGAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTACAGGTAGGTGGGATGGTGTaGGAAGTAATTGTTGACGGC +
Preference number: 4 (lower is better)
Translates to: TPAPTRPYTRLFWVPWLQVGGMV*EVIVDG
Trigger: GCCGTCAACAATTACTTCTCACACCATCCCACCTAC...CTGTAACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTCGTGGGGGCAGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCGTCACGCAGAGGCACTaGGGTCCACTTAGAGACATC +
Preference number: 4 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGVTQRH*GPLRDI
Trigger: GATGTCTCTAAGTGGACCTCAGTGCCTCTGCGTGAC...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCGTCACGCAGAGGCACTaGGGTCCACTTAGAGACATC +
Preference number: 4 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSVTQRH*GPLRDI
Trigger: GATGTCTCTAAGTGGACCTCAGTGCCTCTGCGTGAC...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCACTGAGGTCCTGTTCTaGAGCAGCTTGTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSTEVLF*SSLWGQ
Trigger: TTGCCCCCACAAGCTGCTGCAGAACAGGACCTCAGT...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp ACGAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTACAGGTCTCCCCACTGCACTTGGTGTTGACATaGGCACGTCGGTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TRPYTRLFWVPWLQVSPLHLVLT*ARRCLQ
Trigger: CTGAAGGCACCGACGTGCCCATGTCAACACCAAGTG...CAGTGGGGAGACCTGTAACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTGGAGGCAGAGGTTGTTaGAGGTGTACTGGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSGGRGC*RCTGVS
Trigger: GCTCACTCCAGTACACCTCCAACAACCTCTGCCTCC...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp ACCCCTGCCCCCACGAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTACAGAGAGATAGTCTCCGGTaGCCCTATGTCAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: TPAPTRPYTRLFWVPWLQRDSLR*PYVNAA
Trigger: AGCAGCATTGACATAGGGCCACCGGAGACTATCTCT...CTGTAACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTCGTGGGGGCAGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTACCAGTGAGTTTCCGTaGTCACGCAGAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSTSEFP*SRRGTE
Trigger: CTCAGTGCCTCTGCGTGACCACGGAAACTCACTGGT...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp CATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTCTCTTCTGGGTGCCCTaGTTACAGGTCTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: HAVQCPRGHGCKQRVEGALFWVP*LQVSPL
Trigger: CAGTGGGGAGACCTGTAACCAGGGCACCCAGAAGAG...AGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGGTGCCTCCATTCTTaGAGCGAGAGGCCGTATTCT +
Preference number: 4 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGRCLHS*SERPYS
Trigger: AGAATACGGCCTCTCGCTGCAAGAATGGAGGCACCT...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGCTCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACCATGGTCCCTGGCCTTaGCATCGGAGCTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GSQWENAPPSLAGLGSPHHGPWP*HRSSEH
Trigger: GTGCTCAGAGCTCCGATGCCAAGGCCAGGGACCATG...GTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp ACCCCTGCCCCCACGAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTACAGTTGTTGGAGGTGTACTaGAGTGAGCAGGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: TPAPTRPYTRLFWVPWLQLLEVY*SEQEEM
Trigger: CATTTCCTCCTGCTCACTCCAGTACACCTCCAACAA...CTGTAACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTCGTGGGGGCAGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCTACACCAGACTCTTCTaGGTGCCCTGGTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSYTRLF*VPWLQV
Trigger: GACCTGTAACCAGGGCACCCAGAAGAGTCTGGTGTA...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp ACAGGGGCTGATGCAGTATGGCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTTGGCATCGGAGCTCTaGGCACGTCTCACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: TGADAVWLLVPVLHYEVVLASEL*ARLTCL
Trigger: CAGGCAAGTGAGACGTGCTCAGAGCTCCGATGCCAA...GACTACTTCGTAGTGGAGTACCGGGACCAGAAGCCATACTGCATCAGCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCCGCATAGTGGTGACCTaGAGAGTTGCTGGAGATGAA +
Preference number: 4 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGRIVVT*RVAGDE
Trigger: TTCATCTCCAGCAACTCTTCAGGTCACCACTATGCG...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCAGGAATTGTGGGAGTTaGGGCAGTGTCAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSRNCGS*GSVSRR
Trigger: CCTTCTACTGACACTGCCTCAACTCCCACAATTCCT...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCTGGTGGTCATGGTGGTaGCAGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFWWSWW*QPQGSQ
Trigger: CTGTGAACCCTGAGGCTGTCACCACCATGACCACCA...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCTGGGACACTGGCACTTaGGCCCATCCCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVWDTGT*AHPRCL
Trigger: GAGGCACCTGGGATGGGCTCAAGTGCCAGTGTCCCA...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp ACAGGGGCTGATGCAGTATGGCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTCCCCACTGTACCAGTaGGTTTCCGTGGTCACGCAG +
Preference number: 4 (lower is better)
Translates to: TGADAVWLLVPVLHYEVVSPLYQ*VSVVTQ
Trigger: CTGCGTGACCACGGAAACTCACTGGTACAGTGGGGA...GACTACTTCGTAGTGGAGTACCGGGACCAGAAGCCATACTGCATCAGCCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp ACCCCTGCCCCCACGAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTACAGCTCCATGCCTTAAAATaGTGTCGTCATTACCTGAGG +
Preference number: 4 (lower is better)
Translates to: TPAPTRPYTRLFWVPWLQLHALK*CRHYLR
Trigger: CCTCAGGTAATGACGACATCATTTTAAGGCATGGAG...CTGTAACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTCGTGGGGGCAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCGGGGAGGAACATCTCTaGGCTTGTTTGGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSGEEHL*ACLEVL
Trigger: TAGCACTTCCAAACAAGCTCAGAGATGTTCCTCCCC...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTATGGAAGGGGTaGTACTCTCAGGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSMVWKG*YSQETS
Trigger: CGAGGTTTCCTGAGAGTAGCACCCCTTCCATACCAT...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTGTCACCGTAATGTTTTaGACTTGGGTGCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSVTVMF*TWVPVV
Trigger: CACCACTGGCACCCAAGTGCAAAACATTACGGTGAC...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCGAGACATCTGGCACTTaGCGAGGTTACAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGETSGT*RGYSSW
Trigger: CCAAGAACTGTAACCTCGGCAAGTGCCAGATGTCTC...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCCCAGACTCTTCTGGGTaGCCTGGTTACAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFPDSSG*PGYRSP
Trigger: GGGAGACCTGTAACCAGGGCACCCAGAAGAGTCTGG...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGACAGCTGCTGGCACTaGCGGTTCAAGACGTCCCCT +
Preference number: 4 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVDSCWH*RFKTSP
Trigger: AGGGGACGTCTTGAACCGTCAGTGCCAGCAGCTGTC...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCGAAGAGGTGCAGTGCTaGCAAAAGCCATTGTTGATG +
Preference number: 4 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGEEVQC*QKPLLM
Trigger: CATCAACAATGGCTTTTGTCAGCACTGCACCTCTTC...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTACAGGTCTCCCCACTGTAGAGGTGTTGAAAGTGTaGTGGCCTCAGAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: EAVHQTLLGALVTGLPTVEVLKV*WPQKDS
Trigger: TGAGTCCTTCTGAGGCCAGCACACTTTCAACACCTC...TACAGTGGGGAGACCTGTAACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCTTCTGCAGCAGCTTGTaGGGGCAAGAGCGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSFCSSL*GQERED
Trigger: GTCCTCTCGCTCTTGCCCCCACAAGCTGCTGCAGAA...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTGTGTTGAAAGTGTGCTaGCCTCAGAAGGACTCATCA +
Preference number: 4 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSVLKVC*PQKDSS
Trigger: TGATGAGTCCTTCTGAGGCCAGCACACTTTCAACAC...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGCTCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACCAGGGTTCACAGTCGTaGAGGAGGCAGAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GSQWENAPPSLAGLGSPHQGSQS*RRQRLL
Trigger: CAACAACCTCTGCCTCCTCCACGACTGTGAACCCTG...GTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTAAAGTGGTCCGTGTGCTaGGTTTTGTCCTGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVKWSVC*VLSWWS
Trigger: TGACCACCAGGACAAAACCCAGCACACGGACCACTT...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCGGGGCTGATGCAGTATaGCTTCTGGTCCCGGTACTC +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSGADAV*LLVPVL
Trigger: GAGTACCGGGACCAGAAGCCATACTGCATCAGCCCC...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp CATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTCCACTTAGAGACATCTaGCACTTGCCGAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: HAVQCPRGHGCKQRVEGAPLRDI*HLPRLQ
Trigger: CTGTAACCTCGGCAAGTGCCAGATGTCTCTAAGTGG...AGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACCACCAGCATCACGCTaGGAGGCATTCTTGTTAATG +
Preference number: 4 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVPPASR*EAFLLM
Trigger: CATTAACAAGAATGCCTCTCAGCGTGATGCTGGTGG...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCAAGAGTTGCTGGAGATaGACTGGCTTGACTAGAACT +
Preference number: 4 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSKSCWR*TGLTRT
Trigger: AGTTCTAGTCAAGCCAGTTCATCTCCAGCAACTCTT...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTGTGTGCTTCCTTCTGTaGTCACTGATACAGATATGG +
Preference number: 4 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSVCFLL*SLIQIW
Trigger: CCATATCTGTATCAGTGATCACAGAAGGAAGCACAC...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCACGGAGAGCTACCAGGATaGTCAGCATCAGCACGACCC +
Preference number: 4 (lower is better)
Translates to: HDKPIGASTGFYLRISQHGELPG*SASARP
Trigger: GGGTCGTGCTGATGCTGATCATCCTGGTAGCTCTCC...GTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp CTGAGGCCTCTGAATTCGGATCTTTGTTTCAGGGTCTATGTGTCTCAAGGAGGGCGTCCCCTTGGGAGATaGACCCTCCTCCATCCCACA +
Preference number: 4 (lower is better)
Translates to: LRPLNSDLCFRVYVSQGGRPLGR*TLLHPT
Trigger: TGTGGGATGGAGGAGGGTGCATCTCCCAAGGGGACG...CCCTCCTTGAGACACATAGACCCTGAAACAAAGATCCGAATTCAGAGGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR GCA 90 bp GAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTACAGGTCTCCCCACTGTAGAAGTGTTGAAGCTGTaGCAGCCTCAGAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: EAVHQTLLGALVTGLPTVEVLKL*QPQKWS
Trigger: TGACCATTTCTGAGGCTGGCACAGCTTCAACACTTC...TACAGTGGGGAGACCTGTAACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR GCA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTTACAGCACCAGTTGTTaGAGGAAAGACATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSYSTSC*RKDISS
Trigger: ACTGCTGATGTCTTTCCTGCAACAACTGGTGCTGTA...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCAGGAAGTGGTCCGTGTaGTGGGTTTTGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSRKWSV*WVLSWW
Trigger: CCACCAGGACAAAACCCAGCACACGGACCACTTCCT...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp AGGCTCACAGGGGCTGATGCAGTATGGCTTCTGGTCCCGGTACTCCACTACGAAGAGACATCTGGCACTTaGCGAGGTTACAGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RLTGADAVWLLVPVLHYEETSGT*RGYSSW
Trigger: CCAAGAACTGTAACCTCGGCAAGTGCCAGATGTCTC...TTCGTAGTGGAGTACCGGGACCAGAAGCCATACTGCATCAGCCCCTGTGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCTGTCTGAAGTCACACTaGACTCAATCGAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSCLKSH*TQSRSS
Trigger: AGATGACCTCGATTGAGTCCAGTGTGACTTCAGACA...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTCTGATACAGATATGGTaGTGGCTACAGGAATTGTGG +
Preference number: 4 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSLIQIW*WLQELW
Trigger: CCACAATTCCTGTAGCCACCACCATATCTGTATCAG...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTCGTGGGGACAGCGGTaGTGGTCACCGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GTSLSLFGSASREVQIDTSWGQR*WSPWGR
Trigger: CCTTCCCCACGGTGACCACCACCGCTGTCCCCACGA...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGTCGTGGGGACAGCGGTaGTGGTCACCGTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQSWGQR*WSPWGR
Trigger: CCTTCCCCACGGTGACCACCACCGCTGTCCCCACGA...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCGAAGGTCCCAGGAGCTaGTCCACTGTCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSEGPRS*STVLFL
Trigger: CAAGAAGAGGACAGTGGACCAGCTCCTGGGACCTTC...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp CATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTTGGACTCCAGGTGGATaGAATCATCATCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: HAVQCPRGHGCKQRVEGAWTPGG*NHHLGR
Trigger: TCTGCCAAGATGATGATTCCATCCACCTGGAGTCCA...AGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCAATCCTGGCGATCAATaGGGTGAAAGATGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSNPGDQ*GERCCS
Trigger: ACTGCAACATCTTTCACCCCATTGATCGCCAGGATT...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCGTCACTGGTAGATTCTaGAGTTGTTCTGGATTCTGT +
Preference number: 4 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSVTGRF*SCSGFC
Trigger: ACAGAATCCAGAACAACTTCAGAATCTACCAGTGAC...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGCTCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACGACAACAGAAGGTGTTaGAAGGGTGCTACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GSQWENAPPSLAGLGSPHDNRRC*KGATLR
Trigger: TCTGAGGGTAGCACCCTTTCAACACCTTCTGTTGTC...GTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp ACAGGGGCTGATGCAGTATGGCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCGACAACAGAAGGTGTTaGAAGGGTGCTACCCTCAGA +
Preference number: 4 (lower is better)
Translates to: TGADAVWLLVPVLHYEVVDNRRC*KGATLR
Trigger: TCTGAGGGTAGCACCCTTTCAACACCTTCTGTTGTC...GACTACTTCGTAGTGGAGTACCGGGACCAGAAGCCATACTGCATCAGCCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTAAAGAGTTGTAGGAGATaGACTGCCTTCAGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVKSCRR*TAFRGS
Trigger: ACTGCCTCTGAAGGCAGTTCATCTCCTACAACTCTT...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCAGGAATTGTGGGAGTTaGGGCAGTGTCAGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFRNCGS*GSVSRR
Trigger: CCTTCTACTGACACTGCCTCAACTCCCACAATTCCT...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTACAGGTCTCCCCACTGTATTACAATGGGAACATTaGGTTCCCATGGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EAVHQTLLGALVTGLPTVLQWEH*VPMEGS
Trigger: AGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAA...TACAGTGGGGAGACCTGTAACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp GGCTCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACCCACGGGTTTCTATTTaGGAATCTCCCAGCACTGCT +
Preference number: 4 (lower is better)
Translates to: GSQWENAPPSLAGLGSPHPRVSI*ESPSTA
Trigger: AGCAGTGCTGGGAGATTCTCAAATAGAAACCCGTGG...GTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTAATCTGGAGCGTCTTTaGAAAATGAGCAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: HAVQCPRGHGCKQRVEGANLERL*KMSRKA
Trigger: GGCTTTCCTGCTCATTTTTCAAAGACGCTCCAGATT...AGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp ACAGGGGCTGATGCAGTATGGCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTGGCGATCAATGGGGTaGAAGATGTTGCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TGADAVWLLVPVLHYEVVWRSMG*KMLQSE
Trigger: CTCTGACTGCAACATCTTTCACCCCATTGATCGCCA...GACTACTTCGTAGTGGAGTACCGGGACCAGAAGCCATACTGCATCAGCCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACATGTCGTAGCTTTGTaGTGTTCACCCCGACATACT +
Preference number: 4 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVHVVAL*CSPRHT
Trigger: AGTATGTCGGGGTGAACATCACAAAGCTACGACATG...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR GCA 90 bp AGGCTCACAGGGGCTGATGCAGTATGGCTTCTGGTCCCGGTACTCCACTACGAAACACAGACATGGTGGTaGTGTCAAGAGTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RLTGADAVWLLVPVLHYETQTWW*CQELQK
Trigger: CTTCTGCAACTCTTGACAGCACCACCATGTCTGTGT...TTCGTAGTGGAGTACCGGGACCAGAAGCCATACTGCATCAGCCCCTGTGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR GCA 90 bp ACAGGGGCTGATGCAGTATGGCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCGTCACCGTAATGTTTTaGACTTGGGTGCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TGADAVWLLVPVLHYEVVVTVMF*TWVPVV
Trigger: CACCACTGGCACCCAAGTGCAAAACATTACGGTGAC...GACTACTTCGTAGTGGAGTACCGGGACCAGAAGCCATACTGCATCAGCCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCTGTTGGTGTCATCCTaGTACTGGAGACACCAGGAG +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSLLVSS*YWRHQE
Trigger: CTCCTGGTGTCTCCAGTACCAGGATGACACCAACAG...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTAAGGTGTGAGGTGTACTaGTTGCAGAAAGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVRCEVY*LQKALM
Trigger: CATCAACGCTTTCTGCAACCAGTACACCTCACACCT...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp AGTATGGCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTCCATATTCCTTGGCCGTGGGGAAGGAAGTaGTCCGTGTGCTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SMASGPGTPLRSSLHIPWPWGRK*SVCWVL
Trigger: CAAAACCCAGCACACGGACCACTTCCTTCCCCACGG...CCAAGGAATATGGAGACTACTTCGTAGTGGAGTACCGGGACCAGAAGCCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCATGCAGTATGGCTTCTaGTCCCGGTACTCCACTACG +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSMQYGF*SRYSTT
Trigger: CGTAGTGGAGTACCGGGACCAGAAGCCATACTGCAT...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTAGTTTCACCTCTCTCTTaGAGCGGAAAACGAGCATCA +
Preference number: 4 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVVSPLS*SGKRAS
Trigger: TGATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAAC...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGCTCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACGAAGAGGTGCAGTGCTaGCAAAAGCCATTGTTGATG +
Preference number: 4 (lower is better)
Translates to: GSQWENAPPSLAGLGSPHEEVQC*QKPLLM
Trigger: CATCAACAATGGCTTTTGTCAGCACTGCACCTCTTC...GTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCCCACTGGCGTGGTGCTaGAAGACATATTTGTTAGTG +
Preference number: 4 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFPLAWC*KTYLLV
Trigger: CACTAACAAATATGTCTTTCAGCACCACGCCAGTGG...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCGGAGTAGAATTGCTCTaGGTAGAAGTGGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFGVELL*VEVVTG
Trigger: ACCTGTGACCACTTCTACTCAGAGCAATTCTACTCC...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCAGCAGGTATGGAGAATaGACCGGCTTTGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSSRYGE*TGFGRG
Trigger: ACCTCTACCAAAGCCGGTTCATTCTCCATACCTGCT...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp ACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGTTGGGACACTGGCACTTaGGCCCATCCCAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: TSLSLFGSASREVQIDTCWDTGT*AHPRCL
Trigger: GAGGCACCTGGGATGGGCTCAAGTGCCAGTGTCCCA...ACAAGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGCTCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACCAAGACGTAGCTTTGTaGTGTTCACCCCGACATACT +
Preference number: 4 (lower is better)
Translates to: GSQWENAPPSLAGLGSPHQDVAL*CSPRHT
Trigger: AGTATGTCGGGGTGAACATCACAAAGCTACGTCTTG...GTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS-3UTR TCA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCAGGCTCACAGGGGCTaGTGCAGTATGGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: YHDKPIGASTGFYLRISQQAHRG*CSMASG
Trigger: ACCAGAAGCCATACTGCATCAGCCCCTGTGAGCCTG...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCACCCTAGCCTGATATCATaGCAAGCCCATTGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: HDKPIGASTGFYLRISQHPSLIS*QAHWSV
Trigger: GACGCTCCAATGGGCTTGTCATGATATCAGGCTAGG...GTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCGGGGAGGAACATCTCTaGGCTTGTTTGGAAGTGCTA +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSGEEHL*ACLEVL
Trigger: TAGCACTTCCAAACAAGCTCAGAGATGTTCCTCCCC...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCGAGGTGTTGAAAGTGTaGTGGCCTCAGAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSEVLKV*WPQKDS
Trigger: TGAGTCCTTCTGAGGCCAGCACACTTTCAACACCTC...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCCAGACTCTTCTGGGTaGCCTGGTTACAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: YHDKPIGASTGFYLRISQPDSSG*PGYRSP
Trigger: GGGAGACCTGTAACCAGGGCACCCAGAAGAGTCTGG...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTCATGGTCCCTGGCCTTaGCATCGGAGCTCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GTSLSLFGSASREVQIDTHGPWP*HRSSEH
Trigger: GTGCTCAGAGCTCCGATGCCAAGGCCAGGGACCATG...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCCCAGGAAAGCTAGTTaGAAGTGTGGTGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSPRKAS*KCGADK
Trigger: CTTGTCAGCACCACACTTCCAACTAGCTTTCCTGGG...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCTTGAAAAAGATGTGGTaGTACTACTACTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGLKKMW*YYYWRL
Trigger: CAACCTCCAGTAGTAGTACCACCACATCTTTTTCAA...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTCCATATTCCTTGGCCATCTCGAGAGGCCGTATTCTaGCACCCATCTCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: ASGPGTPLRSSLHIPWPSREAVF*HPSPKH
Trigger: ATGCTTTGGAGATGGGTGCCAGAATACGGCCTCTCG...AGATGGCCAAGGAATATGGAGACTACTTCGTAGTGGAGTACCGGGACCAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCTCTTCAGGGTCGTACTaGGTCACCGTAATGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFSSGSY*VTVMFC
Trigger: GCAAAACATTACGGTGACCCAGTACGACCCTGAAGA...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCGTTTCACCTCTCTCTTaGAGCGGAAAACGAGCATCA +
Preference number: 4 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFVSPLS*SGKRAS
Trigger: TGATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAAC...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCGGAAATTACTATAGATaGACTCCAGGTGGATGGAAT +
Preference number: 4 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGGNYYR*TPGGWN
Trigger: ATTCCATCCACCTGGAGTCCATCTATAGTAATTTCC...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTGACAGCTGCTGGCACTaGCGGTTCAAGACGTCCCCT +
Preference number: 4 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCDSCWH*RFKTSP
Trigger: AGGGGACGTCTTGAACCGTCAGTGCCAGCAGCTGTC...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGACACCAGGAGTGTCTaGAGTCACACTGGACTCAAT +
Preference number: 4 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVDTRSV*SHTGLN
Trigger: ATTGAGTCCAGTGTGACTTCAGACACTCCTGGTGTC...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGTTCTTCACTTGGTGTTaGCATGGGCACGTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: YHDKPIGASTGFYLRISQFFTWC*HGHVGA
Trigger: GGCACCGACGTGCCCATGTCAACACCAAGTGAAGAA...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCCCACCAGCATCACGCTaGGAGGCATTCTTGTTAATG +
Preference number: 4 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVPPASR*EAFLLM
Trigger: CATTAACAAGAATGCCTCTCAGCGTGATGCTGGTGG...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCCACTGGCGTGGTGCTaGAAGACATATTTGTTAGTG +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSPLAWC*KTYLLV
Trigger: CACTAACAAATATGTCTTTCAGCACCACGCCAGTGG...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCAAGAGTTGTAGGAGATaGACTGCCTTCAGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSKSCRR*TAFRGS
Trigger: ACTGCCTCTGAAGGCAGTTCATCTCCTACAACTCTT...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp ACAGGGGCTGATGCAGTATGGCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTTTTTAGCTCTTCGGTaGACTTCACACTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: TGADAVWLLVPVLHYEVVFLALR*TSHWSL
Trigger: CAGTGACCAGTGTGAAGTTCACCGAAGAGCTAAAAA...GACTACTTCGTAGTGGAGTACCGGGACCAGAAGCCATACTGCATCAGCCCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCAATCTGGAGCGTCTTTaGAAAATGAGCAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFNLERL*KMSRKA
Trigger: GGCTTTCCTGCTCATTTTTCAAAGACGCTCCAGATT...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCTATGAGAGCATTTTGTaGTATGTAAAGTGCATGCAG +
Preference number: 4 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSYESIL*YVKCMQ
Trigger: CTGCATGCACTTTACATATCACAAAATGCTCTCATA...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCACTGAGGTCCTGTTCTaGAGCAGCTTGTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALTEVLF*SSLWGQ
Trigger: TTGCCCCCACAAGCTGCTGCAGAACAGGACCTCAGT...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GGAGGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACCTGTGGCGGTGTTTaGCGCAGAACCTGTCCTAAC +
Preference number: 4 (lower is better)
Translates to: GGTSLSLFGSASREVQIDTCGGV*RRTCPN
Trigger: GTTAGGACAGGTTCTGCGGCAAACACCGCCACAGGT...ATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCGAGTTATTGAAAGTGTaGTCATTTCAGAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGELLKV*SFQKWQ
Trigger: TTGCCACTTCTGAAATGAGCACACTTTCAATAACTC...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp AGGCTCACAGGGGCTGATGCAGTATGGCTTCTGGTCCCGGTACTCCACTACGAAGACAATCTGTACTTTTaGCGTTTCACCTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RLTGADAVWLLVPVLHYEDNLYF*RFTSLL
Trigger: CAAGAGAGAGGTGAAACGGCAAAAGTACAGATTGTC...TTCGTAGTGGAGTACCGGGACCAGAAGCCATACTGCATCAGCCCCTGTGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCACTCAAATACATTCTTaGCTCCACGACATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGTQIHS*LHDICR
Trigger: TCTACAAATGTCGTGGAGCCAAGAATGTATTTGAGT...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAGGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATCACTTGGTGTTGACATaGGCACGTCGGTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GGTSLSLFGSASREVQIDHLVLT*ARRCLQ
Trigger: CTGAAGGCACCGACGTGCCCATGTCAACACCAAGTG...ATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCACCAGTGAGTTTCCGTaGTCACGCAGAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALTSEFP*SRRGTE
Trigger: CTCAGTGCCTCTGCGTGACCACGGAAACTCACTGGT...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCTCTTCTGGGTGCCCTaGTTACAGGTCTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQLFWVP*LQVSPL
Trigger: CAGTGGGGAGACCTGTAACCAGGGCACCCAGAAGAG...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTTCTTCACTTGGTGTTaGCATGGGCACGTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: GTSLSLFGSASREVQIDTFFTWC*HGHVGA
Trigger: GGCACCGACGTGCCCATGTCAACACCAAGTGAAGAA...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCTTGGAAGTGTGGTGCTaGCAAGGAGAGTTGTTAATG +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSLEVWC*QGELLM
Trigger: CATTAACAACTCTCCTTGTCAGCACCACACTTCCAA...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGGGTTGCAGAAAGCGTTaGTGCAGAAGTAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: YHDKPIGASTGFYLRISQGCRKR*CRSSAA
Trigger: GGCTGCACTACTTCTGCATCAACGCTTTCTGCAACC...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TTTTGCCGTTTCACCTCTCTCTTGGAGCGGAAAACGAGCATCAGGAGAGCTACCACAGAAGTAGAGGTGTaGGGTGTACTGGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: FCRFTSLLERKTSIRRATTEVEV*GVLVAE
Trigger: TTCTGCAACCAGTACACCTCACACCTCTACTTCTGT...GGTAGCTCTCCTGATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAACGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp GTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCTGGTGGTCATGGTGGTaGCAGCCTCAGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: VLTMGTLSSHGRLSMGKCWWSWW*QPQGSQ
Trigger: CTGTGAACCCTGAGGCTGTCACCACCATGACCACCA...GCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTTCCCCACTGTACCAGTaGGTTTCCGTGGTCACGCAG +
Preference number: 4 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCSPLYQ*VSVVTQ
Trigger: CTGCGTGACCACGGAAACTCACTGGTACAGTGGGGA...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTTCAAGACGTCCCCTTaGGAGATGCACCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GTSLSLFGSASREVQIDTFKTSP*EMHPPP
Trigger: TGGAGGAGGGTGCATCTCCCAAGGGGACGTCTTGAA...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCCTGTTGGTGTCATCCTaGTACTGGAGACACCAGGAG +
Preference number: 4 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALLLVSS*YWRHQE
Trigger: CTCCTGGTGTCTCCAGTACCAGGATGACACCAACAG...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp CATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCACTTGACACAGACATGGTaGTGCTGTCAAGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HDKPIGASTGFYLRISQHLTQTW*CCQELQ
Trigger: CTGCAACTCTTGACAGCACCACCATGTCTGTGTCAA...GTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGCTGGTGTAAACAGATaGTATGGAAGGGGTGCTACT +
Preference number: 4 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVAGVNR*YGRGAT
Trigger: AGTAGCACCCCTTCCATACCATCTGTTTACACCAGC...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAGGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATCGAGAGGCCGTATTCTaGCACCCATCTCCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: GGTSLSLFGSASREVQIDREAVF*HPSPKH
Trigger: ATGCTTTGGAGATGGGTGCCAGAATACGGCCTCTCG...ATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp CATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCACACAGTCAGTTCCATTTaGGCAGAGATAGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: HDKPIGASTGFYLRISQHTVSSI*AEIVSG
Trigger: ACCGGAGACTATCTCTGCCCAAATGGAACTGACTGT...GTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCATTCTGGTGTGTACTTaGTTCTTAGGAGGACGTCAT +
Preference number: 4 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFILVCT*FLGGRH
Trigger: ATGACGTCCTCCTAAGAACCAAGTACACACCAGAAT...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS-3UTR CCA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGATGCAGTATGGCTTCTaGTCCCGGTACTCCACTACG +
Preference number: 4 (lower is better)
Translates to: YHDKPIGASTGFYLRISQMQYGF*SRYSTT
Trigger: CGTAGTGGAGTACCGGGACCAGAAGCCATACTGCAT...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTGGGGCTGATGCAGTATaGCTTCTGGTCCCGGTACTC +
Preference number: 4 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCGADAV*LLVPVL
Trigger: GAGTACCGGGACCAGAAGCCATACTGCATCAGCCCC...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAATTGGCATCGGAGCTCTaGGCACGTCTCACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKLASEL*ARLTCL
Trigger: CAGGCAAGTGAGACGTGCTCAGAGCTCCGATGCCAA...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAGGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATAGCAGGTATGGAGAATaGACCGGCTTTGGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: GGTSLSLFGSASREVQIDSRYGE*TGFGRG
Trigger: ACCTCTACCAAAGCCGGTTCATTCTCCATACCTGCT...ATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCACGTGTGCTTCCTTCTGTaGTCACTGATACAGATATGG +
Preference number: 4 (lower is better)
Translates to: HDKPIGASTGFYLRISQHVCFLL*SLIQIW
Trigger: CCATATCTGTATCAGTGATCACAGAAGGAAGCACAC...GTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTGGAGGTGTACTGGAGTaGGCAGGAGGAAATGTAGGT +
Preference number: 4 (lower is better)
Translates to: GTSLSLFGSASREVQIDTGGVLE*AGGNVG
Trigger: ACCTACATTTCCTCCTGCTCACTCCAGTACACCTCC...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTGGGTGCCAGTGGTGTTaGAACACATCATGTCGTAGC +
Preference number: 4 (lower is better)
Translates to: GTSLSLFGSASREVQIDTGCQWC*NTSCRS
Trigger: GCTACGACATGATGTGTTTCAACACCACTGGCACCC...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR GCA 90 bp TATAGATGGACTCCAGGTGGATGGAATCATCATCTTGGCAGATGTCAAAGCCAAAGGAAGTGGTCCGTGTaGTGGGTTTTGTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: YRWTPGGWNHHLGRCQSQRKWSV*WVLSWW
Trigger: CCACCAGGACAAAACCCAGCACACGGACCACTTCCT...TTGGCTTTGACATCTGCCAAGATGATGATTCCATCCACCTGGAGTCCATCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR GCA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGAGGTGCCTCCATTCTTaGAGCGAGAGGCCGTATTCT +
Preference number: 4 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQRCLHS*SERPYS
Trigger: AGAATACGGCCTCTCGCTGCAAGAATGGAGGCACCT...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAATTCTGCAGCAGCTTGTaGGGGCAAGAGCGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKFCSSL*GQERED
Trigger: GTCCTCTCGCTCTTGCCCCCACAAGCTGCTGCAGAA...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp ACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGTTTCAAGACGTCCCCTTaGGAGATGCACCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TSLSLFGSASREVQIDTCFKTSP*EMHPPP
Trigger: TGGAGGAGGGTGCATCTCCCAAGGGGACGTCTTGAA...ACAAGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTAACTCAAATACATTCTTaGCTCCACGACATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVTQIHS*LHDICR
Trigger: TCTACAAATGTCGTGGAGCCAAGAATGTATTTGAGT...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCAGGTCATCTCAGGGTTaGTGCTGCAACTCAAATACA +
Preference number: 4 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVRSSQG*CCNSNT
Trigger: TGTATTTGAGTTGCAGCACCAACCCTGAGATGACCT...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGGTGTCATCCTGGTACTaGAGACACCAGGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQVSSWY*RHQECL
Trigger: CAGACACTCCTGGTGTCTCCAGTACCAGGATGACAC...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCCCAGGAAAGCTAGTTaGAAGTGTGGTGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: YHDKPIGASTGFYLRISQPRKAS*KCGADK
Trigger: CTTGTCAGCACCACACTTCCAACTAGCTTTCCTGGG...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TTTTGCCGTTTCACCTCTCTCTTGGAGCGGAAAACGAGCATCAGGAGAGCTACCCTGATACAGATATGGTaGTGGCTACAGGAATTGTGG +
Preference number: 4 (lower is better)
Translates to: FCRFTSLLERKTSIRRATLIQIW*WLQELW
Trigger: CCACAATTCCTGTAGCCACCACCATATCTGTATCAG...GGTAGCTCTCCTGATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAACGGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp TATAGATGGACTCCAGGTGGATGGAATCATCATCTTGGCAGATGTCAAAGCCAAGGAGGCAGAGGTTGTTaGAGGTGTACTGGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: YRWTPGGWNHHLGRCQSQGGRGC*RCTGVS
Trigger: GCTCACTCCAGTACACCTCCAACAACCTCTGCCTCC...TTGGCTTTGACATCTGCCAAGATGATGATTCCATCCACCTGGAGTCCATCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGAGAGATAGTCTCCGGTaGCCCTATGTCAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: YHDKPIGASTGFYLRISQRDSLR*PYVNAA
Trigger: AGCAGCATTGACATAGGGCCACCGGAGACTATCTCT...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCGTAATGTTTTGCACTTaGGTGCCAGTGGTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSVMFCT*VPVVLK
Trigger: TTTCAACACCACTGGCACCCAAGTGCAAAACATTAC...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAGGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATCCACTTAGAGACATCTaGCACTTGCCGAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: GGTSLSLFGSASREVQIDPLRDI*HLPRLQ
Trigger: CTGTAACCTCGGCAAGTGCCAGATGTCTCTAAGTGG...ATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTACACCAGACTCTTCTaGGTGCCCTGGTTACAGGTC +
Preference number: 4 (lower is better)
Translates to: GTSLSLFGSASREVQIDTYTRLF*VPWLQV
Trigger: GACCTGTAACCAGGGCACCCAGAAGAGTCTGGTGTA...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTGAAGGTCCCAGGAGCTaGTCCACTGTCCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCEGPRS*STVLFL
Trigger: CAAGAAGAGGACAGTGGACCAGCTCCTGGGACCTTC...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR CAA 72 bp GCTAGCAGGGAAGTCCAGATAGATACTTGTATGCCTTaGACTGAAGCGTGGTCCTCCTCTATCAGAGAAGGT +
Preference number: 4 (lower is better)
Translates to: ASREVQIDTCMP*TEAWSSSIREG
Trigger: ACCTTCTCTGATAGAGGAGGACCACGCTTCAGTCAAAGGCATACAAGTATCTATCTGGACTTCCCTGCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTCCATATTCCTTGGCCATCTTAAGAGTTGCTGGAGATaGACTGGCTTGACTAGAACT +
Preference number: 4 (lower is better)
Translates to: LLVPVLHYEVVSIFLGHLKSCWR*TGLTRT
Trigger: AGTTCTAGTCAAGCCAGTTCATCTCCAGCAACTCTT...AAGATGGCCAAGGAATATGGAGACTACTTCGTAGTGGAGTACCGGGACCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCTCTTTCACTGGTAATTaGAATACGTATGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFSFTGN*NTYGSD
Trigger: GTCACTACCATACGTATTTCAATTACCAGTGAAAGA...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGTCCTTCTGTGATCACTaGTACAGATATGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: YHDKPIGASTGFYLRISQSFCDH*YRYGGG
Trigger: GCCACCACCATATCTGTATCAGTGATCACAGAAGGA...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGGGTTGCAGAAAGCGTTaGTGCAGAAGTAGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWGCRKR*CRSSAA
Trigger: GGCTGCACTACTTCTGCATCAACGCTTTCTGCAACC...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAGGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACAGAAGTAGAGGTGTaGGGTGTACTGGTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GGTSLSLFGSASREVQIDTEVEV*GVLVAE
Trigger: TTCTGCAACCAGTACACCTCACACCTCTACTTCTGT...ATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAGGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATCAGGAAAGCCTAGCCTaGTATCATGACAAGCCCATT +
Preference number: 4 (lower is better)
Translates to: GGTSLSLFGSASREVQIDQESLA*YHDKPI
Trigger: AATGGGCTTGTCATGATATCAGGCTAGGCTTTCCTG...ATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGGCGATCAATGGGGTaGAAGATGTTGCAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GTSLSLFGSASREVQIDTWRSMG*KMLQSE
Trigger: CTCTGACTGCAACATCTTTCACCCCATTGATCGCCA...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTCTCGTCCTCTTCAACTaGGCATGCAGCTTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCLVLFN*ACSFRR
Trigger: CCTCCTAAAGCTGCATGCTCAGTTGAAGAGGACGAG...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCGAAGTGTTGAAGCTGTaGCAGCCTCAGAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALEVLKL*QPQKWS
Trigger: TGACCATTTCTGAGGCTGGCACAGCTTCAACACTTC...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTATGGTATGGAAGGGGTaGTACTCTCAGGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: GTSLSLFGSASREVQIDTMVWKG*YSQETS
Trigger: CGAGGTTTCCTGAGAGTAGCACCCCTTCCATACCAT...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACTTAGGAGGACGTCATaGTCCACCACCACACTGCCA +
Preference number: 4 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKLRRTS*STTTLP
Trigger: TGGCAGTGTGGTGGTGGAGCATGACGTCCTCCTAAG...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS-3UTR CCA 90 bp CTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTCCATATTCCTTGGCCATCTTAGGTCATCTCAGGGTTaGTGCTGCAACTCAAATACA +
Preference number: 4 (lower is better)
Translates to: LLVPVLHYEVVSIFLGHLRSSQG*CCNSNT
Trigger: TGTATTTGAGTTGCAGCACCAACCCTGAGATGACCT...AAGATGGCCAAGGAATATGGAGACTACTTCGTAGTGGAGTACCGGGACCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp ACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGTGTGTCATCCTGGTACTaGAGACACCAGGAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TSLSLFGSASREVQIDTCVSSWY*RHQECL
Trigger: CAGACACTCCTGGTGTCTCCAGTACCAGGATGACAC...ACAAGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGGCTGGTGTAAACAGATaGTATGGAAGGGGTGCTACT +
Preference number: 4 (lower is better)
Translates to: YHDKPIGASTGFYLRISQAGVNR*YGRGAT
Trigger: AGTAGCACCCCTTCCATACCATCTGTTTACACCAGC...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGTTGTTGACGGCCTGCTaGATTCTGATGAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQLLTAC*ILMKGS
Trigger: TGACCCCTTCATCAGAATCCAGCAGGCCGTCAACAA...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAGGGCTGGAAATTACTATAGATGGACTCCAGGTGGATGGAATCATCATCTTGTTGTTGACGGCCTGCTaGATTCTGATGAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GGLEITIDGLQVDGIIILLLTAC*ILMKGS
Trigger: TGACCCCTTCATCAGAATCCAGCAGGCCGTCAACAA...CAAGATGATGATTCCATCCACCTGGAGTCCATCTATAGTAATTTCCAGCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp TGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCAGGGTTCACAGTCGTaGAGGAGGCAGAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: CTYNGNIEFPWKALNGKMQGSQS*RRQRLL
Trigger: CAACAACCTCTGCCTCCTCCACGACTGTGAACCCTG...CATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCATGGAATCATCATCTTaGCAGATGTCAAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSMESSS*QMSKPM
Trigger: CATTGGCTTTGACATCTGCCAAGATGATGATTCCAT...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CTGAGGCCTCTGAATTCGGATCTTTGTTTCAGGGTCTATGTGTCTCAAGGAGGGGTCACTGGTAGATTCTaGAGTTGTTCTGGATTCTGT +
Preference number: 4 (lower is better)
Translates to: LRPLNSDLCFRVYVSQGGVTGRF*SCSGFC
Trigger: ACAGAATCCAGAACAACTTCAGAATCTACCAGTGAC...CCCTCCTTGAGACACATAGACCCTGAAACAAAGATCCGAATTCAGAGGCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTCGCATAGTGGTGACCTaGAGAGTTGCTGGAGATGAA +
Preference number: 4 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCRIVVT*RVAGDE
Trigger: TTCATCTCCAGCAACTCTTCAGGTCACCACTATGCG...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGTCTTTCACTCGTAGTTaGCATAGGCATGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQSFTRS*HRHGGG
Trigger: ACCACCACCATGCCTATGTCAACTACGAGTGAAAGA...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp ACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGTGTAGGTGGGATGGTGTaGGAAGTAATTGTTGACGGC +
Preference number: 4 (lower is better)
Translates to: TSLSLFGSASREVQIDTCVGGMV*EVIVDG
Trigger: GCCGTCAACAATTACTTCTCACACCATCCCACCTAC...ACAAGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GAATTCGGATCTTTGTTTCAGGGTCTATGTGTCTCAAGGAGGGCTGGAAATTACTGGCACAGTAGGAGTTaGGGTGGGGTTGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: EFGSLFQGLCVSRRAGNYWHSRS*GGVALN
Trigger: ATTAAGAGCAACCCCACCTCAACTCCTACTGTGCCA...GTAATTTCCAGCCCTCCTTGAGACACATAGACCCTGAAACAAAGATCCGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCTCCATGCCTTAAAATaGTGTCGTCATTACCTGAGG +
Preference number: 4 (lower is better)
Translates to: YHDKPIGASTGFYLRISQLHALK*CRHYLR
Trigger: CCTCAGGTAATGACGACATCATTTTAAGGCATGGAG...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGTTACAATGGGAACATTaGGTTCCCATGGAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: YHDKPIGASTGFYLRISQLQWEH*VPMEGS
Trigger: AGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAA...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTACACAGACATGGTGGTaGTGTCAAGAGTTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GTSLSLFGSASREVQIDTTQTWW*CQELQK
Trigger: CTTCTGCAACTCTTGACAGCACCACCATGTCTGTGT...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCCTCTCAATGGGAAAATaGTCCACCAAGCTTAGCCGG +
Preference number: 4 (lower is better)
Translates to: VLTMGTLSSHGRLSMGKCLSMGK*STKLSR
Trigger: CCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAG...GCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp TATAGATGGACTCCAGGTGGATGGAATCATCATCTTGGCAGATGTCAAAGCCAACTCTCAATGGGAAAATaGTCCACCAAGCTTAGCCGG +
Preference number: 4 (lower is better)
Translates to: YRWTPGGWNHHLGRCQSQLSMGK*STKLSR
Trigger: CCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAG...TTGGCTTTGACATCTGCCAAGATGATGATTCCATCCACCTGGAGTCCATCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAGGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATTGTCTGAAGTCACACTaGACTCAATCGAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: GGTSLSLFGSASREVQIDCLKSH*TQSRSS
Trigger: AGATGACCTCGATTGAGTCCAGTGTGACTTCAGACA...ATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGTTGACACAGACATGGTaGTGCTGTCAAGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQLTQTW*CCQELQ
Trigger: CTGCAACTCTTGACAGCACCACCATGTCTGTGTCAA...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCTGTAAACAGATGGTATaGAAGGGGTGCTACTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALCKQMV*KGCYSQ
Trigger: CTGAGAGTAGCACCCCTTCCATACCATCTGTTTACA...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGTGGCTACAGGAATTGTaGGAGTTGAGGCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWWLQEL*ELRQCQ
Trigger: CTGACACTGCCTCAACTCCCACAATTCCTGTAGCCA...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAAAAGTGGTCCGTGTGCTaGGTTTTGTCCTGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKKWSVC*VLSWWS
Trigger: TGACCACCAGGACAAAACCCAGCACACGGACCACTT...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGTGGACTCCAGGTGGATaGAATCATCATCTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQWTPGG*NHHLGR
Trigger: TCTGCCAAGATGATGATTCCATCCACCTGGAGTCCA...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAGGAGTCACAGGAGATaGACTGACTTGGGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWRSHRR*TDLGRS
Trigger: ACTTCTACCCAAGTCAGTTCATCTCCTGTGACTCCT...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTTCTTTCACTCGTAGTTaGCATAGGCATGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCSFTRS*HRHGGG
Trigger: ACCACCACCATGCCTATGTCAACTACGAGTGAAAGA...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAATGGCACAGTAGGAGTTaGGGTGGGGTTGCTCTTAAT +
Preference number: 4 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKWHSRS*GGVALN
Trigger: ATTAAGAGCAACCCCACCTCAACTCCTACTGTGCCA...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGCAGGAAAGCCTAGCCTaGTATCATGACAAGCCCATT +
Preference number: 4 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWQESLA*YHDKPI
Trigger: AATGGGCTTGTCATGATATCAGGCTAGGCTTTCCTG...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCTCATCTCAGGGTTGGTaGTGCAACTCAAATACATTC +
Preference number: 4 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALSSQGW*CNSNTF
Trigger: GAATGTATTTGAGTTGCAGCACCAACCCTGAGATGA...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAGCTGCAGTAGTCATTaGGGGTGTTGTAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALSCSSH*GCCKFL
Trigger: AAGGAATTTACAACACCCGCAATGACTACTGCAGCT...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCGACAATCTGTACTTTTaGCGTTTCACCTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALDNLYF*RFTSLL
Trigger: CAAGAGAGAGGTGAAACGGCAAAAGTACAGATTGTC...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAGGGCTGGAAATTACTATAGATGGACTCCAGGTGGATGGAATCATCATCTTGTGTAAACAGATGGTATaGAAGGGGTGCTACTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGLEITIDGLQVDGIIILCKQMV*KGCYSQ
Trigger: CTGAGAGTAGCACCCCTTCCATACCATCTGTTTACA...CAAGATGATGATTCCATCCACCTGGAGTCCATCTATAGTAATTTCCAGCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTGTGTTGAAAGTGTGCTaGCCTCAGAAGGACTCATCA +
Preference number: 4 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCVLKVC*PQKDSS
Trigger: TGATGAGTCCTTCTGAGGCCAGCACACTTTCAACAC...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGTGGCTACAGGAATTGTaGGAGTTGAGGCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: CTYNGNIEFPWKALNGKMWLQEL*ELRQCQ
Trigger: CTGACACTGCCTCAACTCCCACAATTCCTGTAGCCA...CATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGATACAGATATGGTGGTaGCTACAGGAATTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQIQIWW*LQELWE
Trigger: CTCCCACAATTCCTGTAGCCACCACCATATCTGTAT...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GACAATCTGTACTTTTGCCGTTTCACCTCTCTCTTGGAGCGGAAAACGAGCATCTCACTGATACAGATATaGTGGTGGCTACAGGAATTG +
Preference number: 4 (lower is better)
Translates to: DNLYFCRFTSLLERKTSISLIQI*WWLQEL
Trigger: CAATTCCTGTAGCCACCACCATATCTGTATCAGTGA...GATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAACGGCAAAAGTACAGATTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp ACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGTTTGTTGGAGGTGTACTaGAGTGAGCAGGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: TSLSLFGSASREVQIDTCLLEVY*SEQEEM
Trigger: CATTTCCTCCTGCTCACTCCAGTACACCTCCAACAA...ACAAGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp ACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGTACAGTCAGTTCCATTTaGGCAGAGATAGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: TSLSLFGSASREVQIDTCTVSSI*AEIVSG
Trigger: ACCGGAGACTATCTCTGCCCAAATGGAACTGACTGT...ACAAGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCTCTTCAGGGTCGTACTaGGTCACCGTAATGTTTTGC +
Preference number: 4 (lower is better)
Translates to: VLTMGTLSSHGRLSMGKCSSGSY*VTVMFC
Trigger: GCAAAACATTACGGTGACCCAGTACGACCCTGAAGA...GCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GGAGGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATAACATTGAGTTCCCATaGAAGGCTCTCAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: GGTSLSLFGSASREVQIDNIEFP*KALNGK
Trigger: TTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTT...ATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
3UTR CAA 72 bp GTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATaGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: VQGLFPVLTMGT*SSHGRLSMGKC
Trigger: GCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAAGGAGTAGAATTGCTCTaGGTAGAAGTGGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKGVELL*VEVVTG
Trigger: ACCTGTGACCACTTCTACTCAGAGCAATTCTACTCC...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGAGGAGTCACAGGAGATaGACTGACTTGGGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: CTYNGNIEFPWKALNGKMRSHRR*TDLGRS
Trigger: ACTTCTACCCAAGTCAGTTCATCTCCTGTGACTCCT...CATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCTTGGAAGTGTGGTGCTaGCAAGGAGAGTTGTTAATG +
Preference number: 4 (lower is better)
Translates to: VLTMGTLSSHGRLSMGKCLEVWC*QGELLM
Trigger: CATTAACAACTCTCCTTGTCAGCACCACACTTCCAA...GCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGTTTTTAGCTCTTCGGTaGACTTCACACTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWFLALR*TSHWSL
Trigger: CAGTGACCAGTGTGAAGTTCACCGAAGAGCTAAAAA...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCTGCCACTTGTATAACTaGGACAATCTGTACTTTTGC +
Preference number: 4 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALCHLYN*DNLYFC
Trigger: GCAAAAGTACAGATTGTCTCAGTTATACAAGTGGCA...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTCATCTCAGGGTTGGTaGTGCAACTCAAATACATTC +
Preference number: 4 (lower is better)
Translates to: GTSLSLFGSASREVQIDTSSQGW*CNSNTF
Trigger: GAATGTATTTGAGTTGCAGCACCAACCCTGAGATGA...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp CTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTCCATATTCCTTGGCCATCTTGAGTTATTGAAAGTGTaGTCATTTCAGAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LLVPVLHYEVVSIFLGHLELLKV*SFQKWQ
Trigger: TTGCCACTTCTGAAATGAGCACACTTTCAATAACTC...AAGATGGCCAAGGAATATGGAGACTACTTCGTAGTGGAGTACCGGGACCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR GCA 90 bp GTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCTACAGCACCAGTTGTTaGAGGAAAGACATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VLTMGTLSSHGRLSMGKCYSTSC*RKDISS
Trigger: ACTGCTGATGTCTTTCCTGCAACAACTGGTGCTGTA...GCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR GCA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGAGCTGCAGTAGTCATTaGGGGTGTTGTAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQSCSSH*GCCKFL
Trigger: AAGGAATTTACAACACCCGCAATGACTACTGCAGCT...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAGAGCTTCCTTCACTTaGAGTAGACATACGCATAGT +
Preference number: 4 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWRASFT*SRHTHS
Trigger: ACTATGCGTATGTCTACTCCAAGTGAAGGAAGCTCT...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGTCACTGATACAGATATaGTGGTGGCTACAGGAATTG +
Preference number: 4 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWSLIQI*WWLQEL
Trigger: CAATTCCTGTAGCCACCACCATATCTGTATCAGTGA...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTCTTTCACTACTTCGGTaGCATTGTCCAATACTGTCT +
Preference number: 4 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCLSLLR*HCPILS
Trigger: AGACAGTATTGGACAATGCCACCGAAGTAGTGAAAG...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS-3UTR CCA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTGTAATGTTTTGCACTTaGGTGCCAGTGGTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCVMFCT*VPVVLK
Trigger: TTTCAACACCACTGGCACCCAAGTGCAAAACATTAC...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp GAATTCGGATCTTTGTTTCAGGGTCTATGTGTCTCAAGGAGGGCTGGAAATTACAACATTGAGTTCCCATaGAAGGCTCTCAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: EFGSLFQGLCVSRRAGNYNIEFP*KALNGK
Trigger: TTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTT...GTAATTTCCAGCCCTCCTTGAGACACATAGACCCTGAAACAAAGATCCGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR TCA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGTCTTTCACTGGTAATTaGAATACGTATGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQSFTGN*NTYGSD
Trigger: GTCACTACCATACGTATTTCAATTACCAGTGAAAGA...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp TATAGATGGACTCCAGGTGGATGGAATCATCATCTTGGCAGATGTCAAAGCCAATGCCACTTGTATAACTaGGACAATCTGTACTTTTGC +
Preference number: 4 (lower is better)
Translates to: YRWTPGGWNHHLGRCQSQCHLYN*DNLYFC
Trigger: GCAAAAGTACAGATTGTCTCAGTTATACAAGTGGCA...TTGGCTTTGACATCTGCCAAGATGATGATTCCATCCACCTGGAGTCCATCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp TATAGATGGACTCCAGGTGGATGGAATCATCATCTTGGCAGATGTCAAAGCCAATTGAAAAAGATGTGGTaGTACTACTACTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: YRWTPGGWNHHLGRCQSQLKKMW*YYYWRL
Trigger: CAACCTCCAGTAGTAGTACCACCACATCTTTTTCAA...TTGGCTTTGACATCTGCCAAGATGATGATTCCATCCACCTGGAGTCCATCTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CCA 90 bp GTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCGGAAATTACTATAGATaGACTCCAGGTGGATGGAAT +
Preference number: 4 (lower is better)
Translates to: VLTMGTLSSHGRLSMGKCGNYYR*TPGGWN
Trigger: ATTCCATCCACCTGGAGTCCATCTATAGTAATTTCC...GCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR TCA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGTATGAGAGCATTTTGTaGTATGTAAAGTGCATGCAG +
Preference number: 4 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWYESIL*YVKCMQ
Trigger: CTGCATGCACTTTACATATCACAAAATGCTCTCATA...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CCA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAAATGGAATCATCATCTTaGCAGATGTCAAAGCCAATG +
Preference number: 4 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKMESSS*QMSKPM
Trigger: CATTGGCTTTGACATCTGCCAAGATGATGATTCCAT...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 90 bp CGAGAGGACCAAGGTCAGCAGACACAGCGCCATGGTCCCTGGCCTTaGCATCGGAGCTCTGAGCACGTCTCACTTGCCTGTCACCCCCAG +
Preference number: 5 (lower is better)
Translates to: REDQGQQTQRHGPWP*HRSSEHVSLACHPQ
Trigger: CTGGGGGTGACAGGCAAGTGAGACGTGCTCAGAGCTCCGATGCCAAGGCCAGGGACCATGGCGCTGTGTCTGCTGACCTTGGTCCTCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 90 bp TCAGCAGACACAGCGCCATGGTCCCTGGCCTTGGCATCGGAGCTCTaGGCACGTCTCACTTGCCTGTCACCCCCAGAGGAGCTGGCGAAA +
Preference number: 5 (lower is better)
Translates to: SADTAPWSLALASEL*ARLTCLSPPEELAK
Trigger: TTTCGCCAGCTCCTCTGGGGGTGACAGGCAAGTGAGACGTGCTCAGAGCTCCGATGCCAAGGCCAGGGACCATGGCGCTGTGTCTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCTGCAGCCTCTGCTGGTaGTTCTGGGTGTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSCSLCW*FWVCWG
Trigger: CCCCCAGCACACCCAGAACAACCAGCAGAGGCTGCA...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 90 bp CAAGAGCGAGAGGACCAAGGTCAGCAGACACAGCGCCATGGTCCCTaGCCTTGGCATCGGAGCTCTGAGCACGTCTCACTTGCCTGTCAC +
Preference number: 5 (lower is better)
Translates to: QEREDQGQQTQRHGP*PWHRSSEHVSLACH
Trigger: GTGACAGGCAAGTGAGACGTGCTCAGAGCTCCGATGCCAAGGCCAGGGACCATGGCGCTGTGTCTGCTGACCTTGGTCCTCTCGCTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTCTGAGCACGTCTCACTaGCCTGTCACCCCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSLSTSH*PVTPRG
Trigger: TCCTCTGGGGGTGACAGGCAAGTGAGACGTGCTCAG...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp ACCCCTGCCCCCACGAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTACAGTGGAGGAGGCAGAGGTaGTTGGAGGTGTACTGGAGT +
Preference number: 5 (lower is better)
Translates to: TPAPTRPYTRLFWVPWLQWRRQR*LEVYWS
Trigger: ACTCCAGTACACCTCCAACAACCTCTGCCTCCTCCA...CTGTAACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTCGTGGGGGCAGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CAA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCTCCGTGTGCTGGGTTTaGTCCTGGTGGTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSSVCWV*SWWSWW
Trigger: CCACCATGACCACCAGGACAAAACCCAGCACACGGA...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 90 bp ACACCACAGCCCAGAAGAGGCCCTATTCCTGGCCTCACATCAAGGTaGGGCAGGAACTGTTGCTTGTATGGAGGTCGGGTCCCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: TPQPRRGPIPGLTSR*GRNCCLYGGRVPGH
Trigger: ATGCCCTGGGACCCGACCTCCATACAAGCAACAGTTCCTGCCCCACCTTGATGTGAGGCCAGGAATAGGGCCTCTTCTGGGCTGTGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470303.1
CDS-3UTR CAA 90 bp CAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCTGGTGGCTACAGGAATaGTGGGAGTTGAGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: QSSVQGVMVVNSGSRALSWWLQE*WELRQC
Trigger: ACACTGCCTCAACTCCCACAATTCCTGTAGCCACCA...GGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp CATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTAGGAGGCAGAGGTTGTaGGAGGTGTACTGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: HAVQCPRGHGCKQRVEGARRQRL*EVYWSE
Trigger: CTCACTCCAGTACACCTCCAACAACCTCTGCCTCCT...AGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTGGTCACCGTAATGTTTaGCACTTGGGTGCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSGHRNV*HLGASG
Trigger: ACCACTGGCACCCAAGTGCAAAACATTACGGTGACC...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCAGATGAGGGGAGGAACATCTGTCAAAGCCAATGTTTaGGAAGGTCCCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: VEGAVHGTEPGQMRGGTSVKANV*EGPRSW
Trigger: CCAGCTCCTGGGACCTTCCAAAACATTGGCTTTGAC...AGATGTTCCTCCCCTCATCTGCCCGGGTTCAGTACCATGGACAGCGCCCTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 90 bp GCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTCCATATTCCTTaGCCATCTTCCGGCAGTCCTCTTCAGGGTCGTACTGGGTCACCG +
Preference number: 5 (lower is better)
Translates to: ASGPGTPLRSSLHIP*PSSGSPLQGRTGSP
Trigger: CGGTGACCCAGTACGACCCTGAAGAGGACTGCCGGAAGATGGCCAAGGAATATGGAGACTACTTCGTAGTGGAGTACCGGGACCAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp CACGACCCCTGCCCCCACGAGGCCGTACACCAGACTCTTCTGGGTGCCCTGGTTTACTACTACTGGAGGTaGATGGTGTGTTTAGTTCAG +
Preference number: 5 (lower is better)
Translates to: HDPCPHEAVHQTLLGALVYYYWR*MVCLVQ
Trigger: CTGAACTAAACACACCATCAACCTCCAGTAGTAGTA...AACCAGGGCACCCAGAAGAGTCTGGTGTACGGCCTCGTGGGGGCAGGGGTCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CAA 90 bp CATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTCACAGTCAGTTCCATTaGGGCAGAGATAGTCTCCGG +
Preference number: 5 (lower is better)
Translates to: HAVQCPRGHGCKQRVEGAHSQFH*GRDSLR
Trigger: CCGGAGACTATCTCTGCCCAAATGGAACTGACTGTG...AGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp CATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCACGTTCAAGACGTCCCCTaGGGAGATGCACCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HDKPIGASTGFYLRISQHVQDVP*GDAPSS
Trigger: GGAGGAGGGTGCATCTCCCAAGGGGACGTCTTGAAC...GTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGGTGCCTCCATTCTaGCAGCGAGAGGCCGTATTC +
Preference number: 5 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSQVPPF*QREAVF
Trigger: GAATACGGCCTCTCGCTGCAAGAATGGAGGCACCTG...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCTGGTGCTGTCAAGAGTaGCAGAAGATGAAATGGCTT +
Preference number: 5 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGWCCQE*QKMKWL
Trigger: AAGCCATTTCATCTTCTGCAACTCTTGACAGCACCA...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTAGGAACATCTCTGAGCTaGTTTGGAAGTGCTAGCAGG +
Preference number: 5 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVGTSLS*FGSASR
Trigger: CCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCCTGAGCACGTCTCACTaGCCTGTCACCCCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALLSTSH*PVTPRG
Trigger: TCCTCTGGGGGTGACAGGCAAGTGAGACGTGCTCAG...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GGCTCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACGAGGTCATCTCAGGGTaGGTGCTGCAACTCAAATAC +
Preference number: 5 (lower is better)
Translates to: GSQWENAPPSLAGLGSPHEVISG*VLQLKY
Trigger: GTATTTGAGTTGCAGCACCAACCCTGAGATGACCTC...GTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTGAACCCGGGCTACTACTACTGGAGGTaGATGGTGTGTTTAGTTCAG +
Preference number: 5 (lower is better)
Translates to: VMVVNSGSRALSMVLNPGYYYWR*MVCLVQ
Trigger: CTGAACTAAACACACCATCAACCTCCAGTAGTAGTA...GCCCGGGTTCAGTACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGTGCAGCCTCTGCTGGTaGTTCTGGGTGTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQCSLCW*FWVCWG
Trigger: CCCCCAGCACACCCAGAACAACCAGCAGAGGCTGCA...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp AGTATGGCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTCCATATTCCTTGGCAGGTGCCTCCATTCTaGCAGCGAGAGGCCGTATTC +
Preference number: 5 (lower is better)
Translates to: SMASGPGTPLRSSLHIPWQVPPF*QREAVF
Trigger: GAATACGGCCTCTCGCTGCAAGAATGGAGGCACCTG...CCAAGGAATATGGAGACTACTTCGTAGTGGAGTACCGGGACCAGAAGCCATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CAA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCTTGGGACACTGGCACTaGAGCCCATCCCAGGTGCCT +
Preference number: 5 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALLGHWH*SPSQVP
Trigger: AGGCACCTGGGATGGGCTCAAGTGCCAGTGTCCCAA...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACGTAATGTTTTGCACTaGGGTGCCAGTGGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVRNVLH*GASGVE
Trigger: TTCAACACCACTGGCACCCAAGTGCAAAACATTACG...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCGTTTCACCTCTCTCTaGGAGCGGAAAACGAGCATC +
Preference number: 5 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSRFTSL*ERKTSI
Trigger: GATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAACG...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCGTCAAAGCCAATGTTTaGGAAGGTCCCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSVKANV*EGPRSW
Trigger: CCAGCTCCTGGGACCTTCCAAAACATTGGCTTTGAC...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp AGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCGAGGGCGCTGTCCATGGTACTTACAATGGGAACATaGAGTTCCCATGGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: SVQGVMVVNSGSRALSMVLTMGT*SSHGRL
Trigger: GAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAG...TACCATGGACAGCGCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 90 bp GGATTCTGTTGGTGTCATCCTGGTACTGGAGACACCAGGAGTGTCTaGAGTCACACTGGACTCAATCGAGGTCATCTCAGGGTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: GFCWCHPGTGDTRSV*SHTGLNRGHLRVGA
Trigger: AGCACCAACCCTGAGATGACCTCGATTGAGTCCAGTGTGACTTCAGACACTCCTGGTGTCTCCAGTACCAGGATGACACCAACAGAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 90 bp GGTGACAGAAGTAGAGGTGTGAGGTGTACTGGTTGCAGAAAGCGTTaGTGCAGAAGTAGTGCAGCCTCTGCTGGTTGTTCTGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: GDRSRGVRCTGCRKR*CRSSAASAGCSGCA
Trigger: AGCACACCCAGAACAACCAGCAGAGGCTGCACTACTTCTGCATCAACGCTTTCTGCAACCAGTACACCTCACACCTCTACTTCTGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 90 bp TCTGATGAAGGGGTCACAGGACGGGTGGTGACAGAAGTAGAGGTGTaGGGTGTACTGGTTGCAGAAAGCGTTGATGCAGAAGTAGTGCAG +
Preference number: 5 (lower is better)
Translates to: SDEGVTGRVVTEVEV*GVLVAESVDAEVVQ
Trigger: CTGCACTACTTCTGCATCAACGCTTTCTGCAACCAGTACACCTCACACCTCTACTTCTGTCACCACCCGTCCTGTGACCCCTTCATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 90 bp TCTTCGGTGAACTTCACACTGGTCACTGTCACAGTCAGTTCCATTTaGGCAGAGATAGTCTCCGGTGGCCCTATGTCAATGCTGCTGACC +
Preference number: 5 (lower is better)
Translates to: SSVNFTLVTVTVSSI*AEIVSGGPMSMLLT
Trigger: GGTCAGCAGCATTGACATAGGGCCACCGGAGACTATCTCTGCCCAAATGGAACTGACTGTGACAGTGACCAGTGTGAAGTTCACCGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GGCTCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCGTGAATGTCTGTTaGAACTCCTGGAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: GSQWENAPPSLAGLGSPHSVNVC*NSWNSW
Trigger: CCAGGAATTCCAGGAGTTCAAACAGACATTCACGGA...GTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp TCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCTGGGTGCCAGTGGTGTaGAAACACATCATGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SQWENAPPSLAGLGSPHSWVPVV*KHIMSE
Trigger: CTCAGACATGATGTGTTTCAACACCACTGGCACCCA...GGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS-3UTR CAA 90 bp CATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCACATCATGACAAGCCCATaGGAGCGTCCACGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: HDKPIGASTGFYLRISQHIMTSP*ERPRVS
Trigger: AGAAACCCGTGGACGCTCCAATGGGCTTGTCATGAT...GTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 90 bp GCACCCATCTCCAAAGCATGTTGTGGTTCTTGGCACAGTAGGAGTTaGGGTGGGGTTGCTCTTAATTGTAGTATTCGTGGGGACAGCGGT +
Preference number: 5 (lower is better)
Translates to: APISKACCGSWHSRS*GGVALNCSIRGDSG
Trigger: ACCGCTGTCCCCACGAATACTACAATTAAGAGCAACCCCACCTCAACTCCTACTGTGCCAAGAACCACAACATGCTTTGGAGATGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306151.9
ENST00000379439.3
ENST00000470303.1
CDS GCA 90 bp TTCCGGCAGTCCTCTTCAGGGTCGTACTGGGTCACCGTAATGTTTTaGACTTGGGTGCCAGTGGTGTTGAAACACATCATGTCTGAGCAA +
Preference number: 5 (lower is better)
Translates to: FRQSSSGSYWVTVMF*TWVPVVLKHIMSEQ
Trigger: TTGCTCAGACATGATGTGTTTCAACACCACTGGCACCCAAGTGCAAAACATTACGGTGACCCAGTACGACCCTGAAGAGGACTGCCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS CCA 90 bp GTGTCATCCTGGTACTGGAGACACCAGGAGTGTCTGAAGTCACACTaGACTCAATCGAGGTCATCTCAGGGTTGGTGCTGCAACTCAAAT +
Preference number: 5 (lower is better)
Translates to: VSSWYWRHQECLKSH*TQSRSSQGWCCNSN
Trigger: ATTTGAGTTGCAGCACCAACCCTGAGATGACCTCGATTGAGTCCAGTGTGACTTCAGACACTCCTGGTGTCTCCAGTACCAGGATGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GAATTCGGATCTTTGTTTCAGGGTCTATGTGTCTCAAGGAGGGCTGGAAATTACGTTCAAGACGTCCCCTaGGGAGATGCACCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: EFGSLFQGLCVSRRAGNYVQDVP*GDAPSS
Trigger: GGAGGAGGGTGCATCTCCCAAGGGGACGTCTTGAAC...GTAATTTCCAGCCCTCCTTGAGACACATAGACCCTGAAACAAAGATCCGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CAA 90 bp GGCTCTCAATGGGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACAAATGCTTTCTTCACTaGGTGTTGACATGGGCACGT +
Preference number: 5 (lower is better)
Translates to: GSQWENAPPSLAGLGSPHKCFLH*VLTWAR
Trigger: ACGTGCCCATGTCAACACCAAGTGAAGAAAGCATTT...GTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCCCATTGAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCTTGGGACACTGGCACTaGAGCCCATCCCAGGTGCCT +
Preference number: 5 (lower is better)
Translates to: VLTMGTLSSHGRLSMGKCLGHWH*SPSQVP
Trigger: AGGCACCTGGGATGGGCTCAAGTGCCAGTGTCCCAA...GCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp AGGCTCACAGGGGCTGATGCAGTATGGCTTCTGGTCCCGGTACTCCACTACGAAGATGGAATCATCATCTaGGCAGATGTCAAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: RLTGADAVWLLVPVLHYEDGIII*ADVKAN
Trigger: ATTGGCTTTGACATCTGCCAAGATGATGATTCCATC...TTCGTAGTGGAGTACCGGGACCAGAAGCCATACTGCATCAGCCCCTGTGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CAA 90 bp CATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGCACTCCACGGGTTTCTATTaGAGAATCTCCCAGCACTGC +
Preference number: 5 (lower is better)
Translates to: HDKPIGASTGFYLRISQHSTGFY*RISQHC
Trigger: GCAGTGCTGGGAGATTCTCAAATAGAAACCCGTGGA...GTGCTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GCTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTCCATATTCCTTGGCCATCTTTATTTCCATGGGCATaGACACAGACATGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: ASGPGTPLRSSLHIPWPSLFPWA*TQTWWC
Trigger: GCACCACCATGTCTGTGTCAATGCCCATGGAAATAA...AGATGGCCAAGGAATATGGAGACTACTTCGTAGTGGAGTACCGGGACCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CAA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCATACAGCACCAGTTGTaGCAGGAAAGACATCAGCAG +
Preference number: 5 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVIQHQL*QERHQQ
Trigger: CTGCTGATGTCTTTCCTGCAACAACTGGTGCTGTAT...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGGAGGAGGCAGAGGTaGTTGGAGGTGTACTGGAGT +
Preference number: 5 (lower is better)
Translates to: GTSLSLFGSASREVQIDTWRRQR*LEVYWS
Trigger: ACTCCAGTACACCTCCAACAACCTCTGCCTCCTCCA...AGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGGGTCACCGTAATGTTTaGCACTTGGGTGCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: YHDKPIGASTGFYLRISQGHRNV*HLGASG
Trigger: ACCACTGGCACCCAAGTGCAAAACATTACGGTGACC...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GGAAAATGCTCCACCAAGCTTAGCCGGACTGGGATCTCCTCACTCCCAGACTTCGATGGAATCATCATCTaGGCAGATGTCAAAGCCAAT +
Preference number: 5 (lower is better)
Translates to: GKCSTKLSRTGISSLPDFDGIII*ADVKAN
Trigger: ATTGGCTTTGACATCTGCCAAGATGATGATTCCATC...GAAGTCTGGGAGTGAGGAGATCCCAGTCCGGCTAAGCTTGGTGGAGCATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GACAATCTGTACTTTTGCCGTTTCACCTCTCTCTTGGAGCGGAAAACGAGCATCATCATGACAAGCCCATaGGAGCGTCCACGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: DNLYFCRFTSLLERKTSIIMTSP*ERPRVS
Trigger: AGAAACCCGTGGACGCTCCAATGGGCTTGTCATGAT...GATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAACGGCAAAAGTACAGATTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS GCA 90 bp ACTGTCTTGTATTCTGGTGTGTACTTGGTTCTTAGGAGGACGTCATaGTCCACCACCACACTGCCAAGACGTAGCTTTGTGATGTTCACC +
Preference number: 5 (lower is better)
Translates to: TVLYSGVYLVLRRTS*STTTLPRRSFVMFT
Trigger: GGTGAACATCACAAAGCTACGTCTTGGCAGTGTGGTGGTGGAGCATGACGTCCTCCTAAGAACCAAGTACACACCAGAATACAAGACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS-3UTR CAA 90 bp CTTCTGGTCCCGGTACTCCACTACGAAGTAGTCTCCATATTCCTTGGCCATCTTTTGTTCTGGATTCTGTaGGTGTCATCCTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: LLVPVLHYEVVSIFLGHLLFWIL*VSSWYW
Trigger: CCAGTACCAGGATGACACCAACAGAATCCAGAACAA...AAGATGGCCAAGGAATATGGAGACTACTTCGTAGTGGAGTACCGGGACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CAA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCAAATGCTTTCTTCACTaGGTGTTGACATGGGCACGT +
Preference number: 5 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVKCFLH*VLTWAR
Trigger: ACGTGCCCATGTCAACACCAAGTGAAGAAAGCATTT...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GGAGGGCTGGAAATTACTATAGATGGACTCCAGGTGGATGGAATCATCATCTTGTGGTGGCTACAGGAATaGTGGGAGTTGAGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: GGLEITIDGLQVDGIIILWWLQE*WELRQC
Trigger: ACACTGCCTCAACTCCCACAATTCCTGTAGCCACCA...CAAGATGATGATTCCATCCACCTGGAGTCCATCTATAGTAATTTCCAGCCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CAA 90 bp GGAGGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATTGTGAGGTGTACTGGTaGCAGAAAGCGTTGATGCAG +
Preference number: 5 (lower is better)
Translates to: GGTSLSLFGSASREVQIDCEVYW*QKALMQ
Trigger: CTGCATCAACGCTTTCTGCAACCAGTACACCTCACA...ATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp TGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGTCCGTGTGCTGGGTTTaGTCCTGGTGGTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: CTYNGNIEFPWKALNGKMSVCWV*SWWSWW
Trigger: CCACCATGACCACCAGGACAAAACCCAGCACACGGA...CATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAGAGACATCTGGCACTaGCCGAGGTTACAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALRDIWH*PRLQFL
Trigger: CAAGAACTGTAACCTCGGCAAGTGCCAGATGTCTCT...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 90 bp AATCGAGGTCATCTCAGGGTTGGTGCTGCAACTCAAATACATTCTTaGCTCCACGACATTTGTAGATGTTGTACCTGTGGCGGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: NRGHLRVGAATQIHS*LHDICRCCTCGGVC
Trigger: GCAAACACCGCCACAGGTACAACATCTACAAATGTCGTGGAGCCAAGAATGTATTTGAGTTGCAGCACCAACCCTGAGATGACCTCGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 90 bp CAGTCCTCTTCAGGGTCGTACTGGGTCACCGTAATGTTTTGCACTTaGGTGCCAGTGGTGTTGAAACACATCATGTCTGAGCAAATATCA +
Preference number: 5 (lower is better)
Translates to: QSSSGSYWVTVMFCT*VPVVLKHIMSEQIS
Trigger: TGATATTTGCTCAGACATGATGTGTTTCAACACCACTGGCACCCAAGTGCAAAACATTACGGTGACCCAGTACGACCCTGAAGAGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS-3UTR CAA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGTTTCTTCACTTGGTGTaGACATGGGCACGTCGGTGC +
Preference number: 5 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWFLHLV*TWARRC
Trigger: GCACCGACGTGCCCATGTCAACACCAAGTGAAGAAA...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp TGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGCGGGTCTCACTGTTAGTTGATTaGGGTATGGTGGTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: CKVHAVQCPRGHGCKQRVSLLVD*GMVVLS
Trigger: TGAAAGCACCACCATACCCAAATCAACTAACAGTGA...GACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp TATCATGACAAGCCCATTGGAGCGTCCACGGGTTTCTATTTGAGAATCTCCCAGTTATTTCCATGGGCATaGACACAGACATGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: YHDKPIGASTGFYLRISQLFPWA*TQTWWC
Trigger: GCACCACCATGTCTGTGTCAATGCCCATGGAAATAA...CTGGGAGATTCTCAAATAGAAACCCGTGGACGCTCCAATGGGCTTGTCATGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGTGTGAGGTGTACTGGTaGCAGAAAGCGTTGATGCAG +
Preference number: 5 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQCEVYW*QKALMQ
Trigger: CTGCATCAACGCTTTCTGCAACCAGTACACCTCACA...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAAAGGAGGCAGAGGTTGTaGGAGGTGTACTGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKRRQRL*EVYWSE
Trigger: CTCACTCCAGTACACCTCCAACAACCTCTGCCTCCT...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGCACAGTCAGTTCCATTaGGGCAGAGATAGTCTCCGG +
Preference number: 5 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWHSQFH*GRDSLR
Trigger: CCGGAGACTATCTCTGCCCAAATGGAACTGACTGTG...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCCGTAATGTTTTGCACTaGGGTGCCAGTGGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALRNVLH*GASGVE
Trigger: TTCAACACCACTGGCACCCAAGTGCAAAACATTACG...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GAATTCGGATCTTTGTTTCAGGGTCTATGTGTCTCAAGGAGGGCTGGAAATTACCGTTTCACCTCTCTCTaGGAGCGGAAAACGAGCATC +
Preference number: 5 (lower is better)
Translates to: EFGSLFQGLCVSRRAGNYRFTSL*ERKTSI
Trigger: GATGCTCGTTTTCCGCTCCAAGAGAGAGGTGAAACG...GTAATTTCCAGCCCTCCTTGAGACACATAGACCCTGAAACAAAGATCCGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CAA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGGATACTTGTATGCCTTaGACTGAAGCGTGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQDTCMP*TEAWSS
Trigger: GGAGGACCACGCTTCAGTCAAAGGCATACAAGTATC...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGTTGTTCTGGATTCTGTaGGTGTCATCCTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQLFWIL*VSSWYW
Trigger: CCAGTACCAGGATGACACCAACAGAATCCAGAACAA...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCAGAGACATCTGGCACTaGCCGAGGTTACAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VLTMGTLSSHGRLSMGKCRDIWH*PRLQFL
Trigger: CAAGAACTGTAACCTCGGCAAGTGCCAGATGTCTCT...GCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCAATGGGAAAATGCTCCACGGGTTTCTATTaGAGAATCTCCCAGCACTGC +
Preference number: 5 (lower is better)
Translates to: VLTMGTLSSHGRLSMGKCSTGFY*RISQHC
Trigger: GCAGTGCTGGGAGATTCTCAAATAGAAACCCGTGGA...GCATTTTCCCATTGAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTGATACTTGTATGCCTTaGACTGAAGCGTGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCDTCMP*TEAWSS
Trigger: GGAGGACCACGCTTCAGTCAAAGGCATACAAGTATC...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp ACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGTGGAACATCTCTGAGCTaGTTTGGAAGTGCTAGCAGG +
Preference number: 5 (lower is better)
Translates to: TSLSLFGSASREVQIDTCGTSLS*FGSASR
Trigger: CCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCC...ACAAGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAACAGTGGTGCTGTCAAGAGTaGCAGAAGATGAAATGGCTT +
Preference number: 5 (lower is better)
Translates to: VICKVHAVQCPRGHGCKQWCCQE*QKMKWL
Trigger: AAGCCATTTCATCTTCTGCAACTCTTGACAGCACCA...CTGTTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GAATTCGGATCTTTGTTTCAGGGTCTATGTGTCTCAAGGAGGGCTGGAAATTACATACAGCACCAGTTGTaGCAGGAAAGACATCAGCAG +
Preference number: 5 (lower is better)
Translates to: EFGSLFQGLCVSRRAGNYIQHQL*QERHQQ
Trigger: CTGCTGATGTCTTTCCTGCAACAACTGGTGCTGTAT...GTAATTTCCAGCCCTCCTTGAGACACATAGACCCTGAAACAAAGATCCGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CAA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCACTACTTCGGTGGCATaGTCCAATACTGTCTTGTAT +
Preference number: 5 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALTTSVA*SNTVLY
Trigger: ATACAAGACAGTATTGGACAATGCCACCGAAGTAGT...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS-3UTR CAA 90 bp GGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGAAGGCTCTCTCTGAATTCGGATCTTaGTTTCAGGGTCTATGTGTC +
Preference number: 5 (lower is better)
Translates to: GLVSCTYNGNIEFPWKALSEFGS*FQGLCV
Trigger: GACACATAGACCCTGAAACAAAGATCCGAATTCAGA...GAGAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGCTTACAATGGGAACATaGAGTTCCCATGGAAGGCTC +
Preference number: 5 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWLTMGT*SSHGRL
Trigger: GAGCCTTCCATGGGAACTCAATGTTCCCATTGTAAG...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp CATTTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTGGAGTTGAGGTGGGGTaGCTCTTAATTGTAGTATTC +
Preference number: 5 (lower is better)
Translates to: HFVICKVHAVQCPRGHGCGVEVG*LLIVVF
Trigger: GAATACTACAATTAAGAGCAACCCCACCTCAACTCC...ACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAATCCGTGAATGTCTGTTaGAACTCCTGGAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKSVNVC*NSWNSW
Trigger: CCAGGAATTCCAGGAGTTCAAACAGACATTCACGGA...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp ACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATACTTGTTATTCTGGTGTGTACTaGGTTCTTAGGAGGACGTCA +
Preference number: 5 (lower is better)
Translates to: TSLSLFGSASREVQIDTCYSGVY*VLRRTS
Trigger: TGACGTCCTCCTAAGAACCAAGTACACACCAGAATA...ACAAGTATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS-3UTR CAA 90 bp GGAGGAACATCTCTGAGCTTGTTTGGAAGTGCTAGCAGGGAAGTCCAGATAGATTTGTCCAATACTGTCTaGTATTCTGGTGTGTACTTG +
Preference number: 5 (lower is better)
Translates to: GGTSLSLFGSASREVQIDLSNTV*YSGVYL
Trigger: CAAGTACACACCAGAATACAAGACAGTATTGGACAA...ATCTATCTGGACTTCCCTGCTAGCACTTCCAAACAAGCTCAGAGATGTTCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS-3UTR CAA 90 bp GGAGGGCTGGAAATTACTATAGATGGACTCCAGGTGGATGGAATCATCATCTTGTCTGAATTCGGATCTTaGTTTCAGGGTCTATGTGTC +
Preference number: 5 (lower is better)
Translates to: GGLEITIDGLQVDGIIILSEFGS*FQGLCV
Trigger: GACACATAGACCCTGAAACAAAGATCCGAATTCAGA...CAAGATGATGATTCCATCCACCTGGAGTCCATCTATAGTAATTTCCAGCCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS-3UTR CAA 90 bp GTAAGTACAGGGCTTGTTTCCTGTACTTACAATGGGAACATTGAGTTCCCATGGTCACTGTTAGTTGATTaGGGTATGGTGGTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: VSTGLVSCTYNGNIEFPWSLLVD*GMVVLS
Trigger: TGAAAGCACCACCATACCCAAATCAACTAACAGTGA...CCATGGGAACTCAATGTTCCCATTGTAAGTACAGGAAACAAGCCCTGTACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS-3UTR CAA 90 bp TTTGTGATATGTAAAGTGCATGCAGTCCAGTGTCCAAGGGGTCATGGTTGTAAAGGAGTTGAGGTGGGGTaGCTCTTAATTGTAGTATTC +
Preference number: 5 (lower is better)
Translates to: FVICKVHAVQCPRGHGCKGVEVG*LLIVVF
Trigger: GAATACTACAATTAAGAGCAACCCCACCTCAACTCC...TTTACAACCATGACCCCTTGGACACTGGACTGCATGCACTTTACATATCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 72 bp ACAGCGCCATGGTCCCTGGCCTTGGCATCGGAGCTCTaGGCACGTCTCACTTGCCTGTCACCCCCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: TAPWSLALASEL*ARLTCLSPPEE
Trigger: CTCCTCTGGGGGTGACAGGCAAGTGAGACGTGCTCAGAGCTCCGATGCCAAGGCCAGGGACCATGGCGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CAA 72 bp CCTGGCCTTGGCATCGGAGCTCTGAGCACGTCTCACTaGCCTGTCACCCCCAGAGGAGCTGGCGAAATGAGC +
Preference number: 6 (lower is better)
Translates to: PGLGIGALSTSH*PVTPRGAGEMS
Trigger: GCTCATTTCGCCAGCTCCTCTGGGGGTGACAGGCAAGTGAGACGTGCTCAGAGCTCCGATGCCAAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS CCA 72 bp GAGGACCAAGGTCAGCAGACACAGCGCCATGGTCCCTaGCCTTGGCATCGGAGCTCTGAGCACGTCTCACTT +
Preference number: 6 (lower is better)
Translates to: EDQGQQTQRHGP*PWHRSSEHVSL
Trigger: AAGTGAGACGTGCTCAGAGCTCCGATGCCAAGGCCAGGGACCATGGCGCTGTGTCTGCTGACCTTGGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS GCA 72 bp ATTCCTGGCCTCACATCAAGGTGGGGCAGGAACTGTTaGTTGTATGGAGGTCGGGTCCCAGGGCATGGGGTG +
Preference number: 6 (lower is better)
Translates to: IPGLTSRWGRNC*LYGGRVPGHGV
Trigger: CACCCCATGCCCTGGGACCCGACCTCCATACAAGCAACAGTTCCTGCCCCACCTTGATGTGAGGCCAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470303.1
CDS CCA 72 bp CCTGTTCACACTGAGGTCCTGTTCTGCAGCAGCTTGTaGGGGCAAGAGCGAGAGGACCAAGGTCAGCAGACA +
Preference number: 6 (lower is better)
Translates to: PVHTEVLFCSSL*GQEREDQGQQT
Trigger: TGTCTGCTGACCTTGGTCCTCTCGCTCTTGCCCCCACAAGCTGCTGCAGAACAGGACCTCAGTGTGAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CAA 72 bp TATTCCTGGCCTCACATCAAGGTGGGGCAGGAACTGTaGCTTGTATGGAGGTCGGGTCCCAGGGCATGGGGT +
Preference number: 6 (lower is better)
Translates to: YSWPHIKVGQEL*LVWRSGPRAWG
Trigger: ACCCCATGCCCTGGGACCCGACCTCCATACAAGCAACAGTTCCTGCCCCACCTTGATGTGAGGCCAGGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470303.1
CDS CCA 72 bp TGGTACTGGAGACACCAGGAGTGTCTGAAGTCACACTaGACTCAATCGAGGTCATCTCAGGGTTGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: WYWRHQECLKSH*TQSRSSQGWCC
Trigger: GCAGCACCAACCCTGAGATGACCTCGATTGAGTCCAGTGTGACTTCAGACACTCCTGGTGTCTCCAGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 72 bp TGGTGTCATCCTGGTACTGGAGACACCAGGAGTGTCTaGAGTCACACTGGACTCAATCGAGGTCATCTCAGG +
Preference number: 6 (lower is better)
Translates to: WCHPGTGDTRSV*SHTGLNRGHLR
Trigger: CCTGAGATGACCTCGATTGAGTCCAGTGTGACTTCAGACACTCCTGGTGTCTCCAGTACCAGGATGACACCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 72 bp AAGGCCTGGGGTTGCACTCACCTATGTCAATGCTGCTaGCCACCTCCTCACACAACTCCCCATAATAGAGGT +
Preference number: 6 (lower is better)
Translates to: KAWGCTHLCQCC*PPPHTTPHNRG
Trigger: ACCTCTATTATGGGGAGTTGTGTGAGGAGGTGGTCAGCAGCATTGACATAGGTGAGTGCAACCCCAGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470303.1
CDS CAA 90 bp CCAAAGCATGTTGTGGTTCTTGGCACAGTAGGAGTTGAGGTGGGGTaGCTCTTAATTGTAGTATTCGTGGGGACAGCGGTGGTGGTCACC +
Preference number: 6 (lower is better)
Translates to: PKHVVVLGTVGVEVG*LLIVVFVGTAVVVT
Trigger: GGTGACCACCACCGCTGTCCCCACGAATACTACAATTAAGAGCAACCCCACCTCAACTCCTACTGTGCCAAGAACCACAACATGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306151.9
ENST00000379439.3
ENST00000470303.1
CDS CAA 90 bp CTCTTCGGTGAACTTCACACTGGTCACTGTCACAGTCAGTTCCATTaGGGCAGAGATAGTCTCCGGTGGCCCTATGTCAATGCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: LFGELHTGHCHSQFH*GRDSLRWPYVNAAD
Trigger: GTCAGCAGCATTGACATAGGGCCACCGGAGACTATCTCTGCCCAAATGGAACTGACTGTGACAGTGACCAGTGTGAAGTTCACCGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CAA 90 bp CTTCCGGCAGTCCTCTTCAGGGTCGTACTGGGTCACCGTAATGTTTaGCACTTGGGTGCCAGTGGTGTTGAAACACATCATGTCGTAGCT +
Preference number: 6 (lower is better)
Translates to: LPAVLFRVVLGHRNV*HLGASGVETHHVVA
Trigger: AGCTACGACATGATGTGTTTCAACACCACTGGCACCCAAGTGCAAAACATTACGGTGACCCAGTACGACCCTGAAGAGGACTGCCGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS CAA 72 bp GTTGTGGTTCTTGGCACAGTAGGAGTTGAGGTGGGGTaGCTCTTAATTGTAGTATTCGTGGGGACAGCGGTG +
Preference number: 6 (lower is better)
Translates to: VVVLGTVGVEVG*LLIVVFVGTAV
Trigger: CACCGCTGTCCCCACGAATACTACAATTAAGAGCAACCCCACCTCAACTCCTACTGTGCCAAGAACCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306151.9
ENST00000379439.3
ENST00000470303.1
CDS TCA 72 bp AGTAGAGGTGTGAGGTGTACTGGTTGCAGAAAGCGTTaGTGCAGAAGTAGTGCAGCCTCTGCTGGTTGTTCT +
Preference number: 6 (lower is better)
Translates to: SRGVRCTGCRKR*CRSSAASAGCS
Trigger: AGAACAACCAGCAGAGGCTGCACTACTTCTGCATCAACGCTTTCTGCAACCAGTACACCTCACACCTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS GCA 72 bp GGGGGCAGTAGACATGGTCACATATGTGAGGGGAGCTaGAGTAGTCATTGCGGGTGTTGTAAATTCCTTAGT +
Preference number: 6 (lower is better)
Translates to: GGSRHGHICEGS*SSHCGCCKFLS
Trigger: ACTAAGGAATTTACAACACCCGCAATGACTACTGCAGCTCCCCTCACATATGTGACCATGTCTACTGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS GCA 72 bp TATTCTGGTGTGTACTTGGTTCTTAGGAGGACGTCATaGTCCACCACCACACTGCCAAGACGTAGCTTTGTG +
Preference number: 6 (lower is better)
Translates to: YSGVYLVLRRTS*STTTLPRRSFV
Trigger: CACAAAGCTACGTCTTGGCAGTGTGGTGGTGGAGCATGACGTCCTCCTAAGAACCAAGTACACACCAGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS GCA 72 bp TCCTCTTCAGGGTCGTACTGGGTCACCGTAATGTTTTaGACTTGGGTGCCAGTGGTGTTGAAACACATCATG +
Preference number: 6 (lower is better)
Translates to: SSSGSYWVTVMF*TWVPVVLKHIM
Trigger: CATGATGTGTTTCAACACCACTGGCACCCAAGTGCAAAACATTACGGTGACCCAGTACGACCCTGAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 72 bp AACTTCACACTGGTCACTGTCACAGTCAGTTCCATTTaGGCAGAGATAGTCTCCGGTGGCCCTATGTCAATG +
Preference number: 6 (lower is better)
Translates to: NFTLVTVTVSSI*AEIVSGGPMSM
Trigger: CATTGACATAGGGCCACCGGAGACTATCTCTGCCCAAATGGAACTGACTGTGACAGTGACCAGTGTGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 72 bp TCAGGGTCGTACTGGGTCACCGTAATGTTTTGCACTTaGGTGCCAGTGGTGTTGAAACACATCATGTCTGAG +
Preference number: 6 (lower is better)
Translates to: SGSYWVTVMFCT*VPVVLKHIMSE
Trigger: CTCAGACATGATGTGTTTCAACACCACTGGCACCCAAGTGCAAAACATTACGGTGACCCAGTACGACCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS CAA 72 bp GAAGTCACACTGGACTCAATCGAGGTCATCTCAGGGTaGGTGCTGCAACTCAAATACATTCTTGGCTCCACG +
Preference number: 6 (lower is better)
Translates to: EVTLDSIEVISG*VLQLKYILGST
Trigger: CGTGGAGCCAAGAATGTATTTGAGTTGCAGCACCAACCCTGAGATGACCTCGATTGAGTCCAGTGTGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CAA 72 bp GAACTTCACACTGGTCACTGTCACAGTCAGTTCCATTaGGGCAGAGATAGTCTCCGGTGGCCCTATGTCAAT +
Preference number: 6 (lower is better)
Translates to: ELHTGHCHSQFH*GRDSLRWPYVN
Trigger: ATTGACATAGGGCCACCGGAGACTATCTCTGCCCAAATGGAACTGACTGTGACAGTGACCAGTGTGAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CAA 72 bp GTCCTCTTCAGGGTCGTACTGGGTCACCGTAATGTTTaGCACTTGGGTGCCAGTGGTGTTGAAACACATCAT +
Preference number: 6 (lower is better)
Translates to: VLFRVVLGHRNV*HLGASGVETHH
Trigger: ATGATGTGTTTCAACACCACTGGCACCCAAGTGCAAAACATTACGGTGACCCAGTACGACCCTGAAGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 72 bp AATAGTGGTCCCAAGGGTGCTTATTTCCATGGGCATTaGCACAGACATGGTGGTGCTGTCAAGAGTTGCAGA +
Preference number: 6 (lower is better)
Translates to: NSGPKGAYFHGH*HRHGGAVKSCR
Trigger: TCTGCAACTCTTGACAGCACCACCATGTCTGTGTCAATGCCCATGGAAATAAGCACCCTTGGGACCACTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 72 bp AATGGTTGTCCCAGGTGTGCTTCCTTCTGTGATCACTaGTACAGATATGGTGGTGGCTACAGGAATTGTGGG +
Preference number: 6 (lower is better)
Translates to: NGCPRCASFCDH*YRYGGGYRNCG
Trigger: CCCACAATTCCTGTAGCCACCACCATATCTGTATCAGTGATCACAGAAGGAAGCACACCTGGGACAACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS GCA 72 bp CACTGGACTCAATCGAGGTCATCTCAGGGTTGGTGCTaGAACTCAAATACATTCTTGGCTCCACGACATTTG +
Preference number: 6 (lower is better)
Translates to: HWTQSRSSQGWC*NSNTFLAPRHL
Trigger: CAAATGTCGTGGAGCCAAGAATGTATTTGAGTTGCAGCACCAACCCTGAGATGACCTCGATTGAGTCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS GCA 72 bp TCACACTGGACTCAATCGAGGTCATCTCAGGGTTGGTaGTGCAACTCAAATACATTCTTGGCTCCACGACAT +
Preference number: 6 (lower is better)
Translates to: SHWTQSRSSQGW*CNSNTFLAPRH
Trigger: ATGTCGTGGAGCCAAGAATGTATTTGAGTTGCAGCACCAACCCTGAGATGACCTCGATTGAGTCCAGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 72 bp AAGTCACACTGGACTCAATCGAGGTCATCTCAGGGTTaGTGCTGCAACTCAAATACATTCTTGGCTCCACGA +
Preference number: 6 (lower is better)
Translates to: KSHWTQSRSSQG*CCNSNTFLAPR
Trigger: TCGTGGAGCCAAGAATGTATTTGAGTTGCAGCACCAACCCTGAGATGACCTCGATTGAGTCCAGTGTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CAA 72 bp TTCAGGGTCGTACTGGGTCACCGTAATGTTTTGCACTaGGGTGCCAGTGGTGTTGAAACACATCATGTCGTA +
Preference number: 6 (lower is better)
Translates to: FRVVLGHRNVLH*GASGVETHHVV
Trigger: TACGACATGATGTGTTTCAACACCACTGGCACCCAAGTGCAAAACATTACGGTGACCCAGTACGACCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379439.3
CDS CAA 90 bp GGAGTGTCTGAAGTCACACTGGACTCAATCGAGGTCATCTCAGGGTaGGTGCTGCAACTCAAATACATTCTTGGCTCCACGACATTTGTA +
Preference number: 6 (lower is better)
Translates to: GVSEVTLDSIEVISG*VLQLKYILGSTTFV
Trigger: TACAAATGTCGTGGAGCCAAGAATGTATTTGAGTTGCAGCACCAACCCTGAGATGACCTCGATTGAGTCCAGTGTGACTTCAGACACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 72 bp AATACGTATGGTAGTGACTTCAGCAGGTATGGAGAATaGACCGGCTTTGGTAGAGGTGAGCAAAGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: NTYGSDFSRYGE*TGFGRGEQRCA
Trigger: AGCACACCTTTGCTCACCTCTACCAAAGCCGGTTCATTCTCCATACCTGCTGAAGTCACTACCATACGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 72 bp TACAGATATGGTGGTGGCTACAGGAATTGTGGGAGTTaGGGCAGTGTCAGTAGAAGGGGTAAAAGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: YRYGGGYRNCGS*GSVSRRGKSCA
Trigger: AGCACAACTTTTACCCCTTCTACTGACACTGCCTCAACTCCCACAATTCCTGTAGCCACCACCATATCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS TCA 72 bp TCCAAAGCATGTTGTGGTTCTTGGCACAGTAGGAGTTaGGGTGGGGTTGCTCTTAATTGTAGTATTCGTGGG +
Preference number: 6 (lower is better)
Translates to: SKACCGSWHSRS*GGVALNCSIRG
Trigger: CCCACGAATACTACAATTAAGAGCAACCCCACCTCAACTCCTACTGTGCCAAGAACCACAACATGCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306151.9
ENST00000379439.3
ENST00000470303.1
CDS CCA 72 bp CATCTCAGGGTTGGTGCTGCAACTCAAATACATTCTTaGCTCCACGACATTTGTAGATGTTGTACCTGTGGC +
Preference number: 6 (lower is better)
Translates to: HLRVGAATQIHS*LHDICRCCTCG
Trigger: GCCACAGGTACAACATCTACAAATGTCGTGGAGCCAAGAATGTATTTGAGTTGCAGCACCAACCCTGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 72 bp CAAGGGTGCTTATTTCCATGGGCATTGACACAGACATaGTGGTGCTGTCAAGAGTTGCAGAAGATGAAATGG +
Preference number: 6 (lower is better)
Translates to: QGCLFPWALTQT*WCCQELQKMKW
Trigger: CCATTTCATCTTCTGCAACTCTTGACAGCACCACCATGTCTGTGTCAATGCCCATGGAAATAAGCACCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306151.9
ENST00000379439.3
CDS CCA 72 bp CATTGTCCAATACTGTCTTGTATTCTGGTGTGTACTTaGTTCTTAGGAGGACGTCATGCTCCACCACCACAC +
Preference number: 6 (lower is better)
Translates to: HCPILSCILVCT*FLGGRHAPPPH
Trigger: GTGTGGTGGTGGAGCATGACGTCCTCCTAAGAACCAAGTACACACCAGAATACAAGACAGTATTGGACAATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS CAA 72 bp GCATTGTCCAATACTGTCTTGTATTCTGGTGTGTACTaGGTTCTTAGGAGGACGTCATGCTCCACCACCACA +
Preference number: 6 (lower is better)
Translates to: ALSNTVLYSGVY*VLRRTSCSTTT
Trigger: TGTGGTGGTGGAGCATGACGTCCTCCTAAGAACCAAGTACACACCAGAATACAAGACAGTATTGGACAATGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS CAA 90 bp GTGATTTTCTCTTTCACTACTTCGGTGGCATTGTCCAATACTGTCTaGTATTCTGGTGTGTACTTGGTTCTTAGGAGGACGTCATGCTCC +
Preference number: 6 (lower is better)
Translates to: VIFSFTTSVALSNTV*YSGVYLVLRRTSCS
Trigger: GGAGCATGACGTCCTCCTAAGAACCAAGTACACACCAGAATACAAGACAGTATTGGACAATGCCACCGAAGTAGTGAAAGAGAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306151.9
CDS CAA 72 bp GTCACCGTAATGTTTTGCACTTGGGTGCCAGTGGTGTaGAAACACATCATGTCTGAGCAAATATCATTAATC +
Preference number: 6 (lower is better)
Translates to: VTVMFCTWVPVV*KHIMSEQISLI
Trigger: GATTAATGATATTTGCTCAGACATGATGTGTTTCAACACCACTGGCACCCAAGTGCAAAACATTACGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306151.9