RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MUC15 (Homo sapiens)

Ensembl gene IDs: ENSG00000169550

Ensembl transcript IDs: ENST00000281268.12, ENST00000436318.6, ENST00000455601.6, ENST00000527569.1, ENST00000529533.6, ENST00000648230.1

Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCATGGCCCCGTTGAATGCAGTCATTGTCAGCTTCATAACTCAGTaGGCTGATCATGTGTGTGCTGATCTAGAAAATTATAACGTACTA +
Preference number: 1 (lower is better)
Translates to: AMAPLNAVIVSFITQ*ADHVCADLENYNVL
Trigger: TAGTACGTTATAATTTTCTAGATCAGCACACACATGATCAGCCCACTGAGTTATGAAGCTGACAATGACTGCATTCAACGGGGCCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR CCA 90 bp AGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTaGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCCTGCTT +
Preference number: 1 (lower is better)
Translates to: SKCLRMAKNCKKENL*MIHPVYISATGLLL
Trigger: AAGCAGGAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
3UTR TCA 90 bp GGATTTATTACATCTTATAGCCATTATTGGACCCATTCTACATTTTaGAAGACTAAGAGAATAGGGTTAGCTATGGGAAATGCTGGCTCA +
Preference number: 1 (lower is better)
Translates to: GFITSYSHYWTHSTF*KTKRIGLAMGNAGS
Trigger: TGAGCCAGCATTTCCCATAGCTAACCCTATTCTCTTAGTCTTTCAAAATGTAGAATGGGTCCAATAATGGCTATAAGATGTAATAAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCCTGCCATGGCCCCGTTaGATGCAGTCATTGTCAGCT +
Preference number: 2 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPLPWPR*MQSLSA
Trigger: AGCTGACAATGACTGCATTCAACGGGGCCATGGCAG...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCAGGCTAGGATGTAGATaGCACTTGCTGTTTAACGCC +
Preference number: 2 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPRLGCR*HLLFNA
Trigger: GGCGTTAAACAGCAAGTGTCATCTACATCCTAGCCT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR CCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCAGCTTCATAACTCAGTaGGCTGATCATGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPSFITQ*ADHVCA
Trigger: AGCACACACATGATCAGCCCACTGAGTTATGAAGCT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR CCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCAAGCTATTACTTTCCTaGGTAGGGTCAGCTTTCCTG +
Preference number: 2 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPKLLLS*VGSAFL
Trigger: CAGGAAAGCTGACCCTACCCAGGAAAGTAATAGCTT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR TCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAGGCTAGGATGTAGATaGCACTTGCTGTTTAACGCC +
Preference number: 2 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVRLGCR*HLLFNA
Trigger: GGCGTTAAACAGCAAGTGTCATCTACATCCTAGCCT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
3UTR-3UTR GCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCGATGTAGATGACACTTaGTGTTTAACGCCTTTTTGC +
Preference number: 2 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPDVDDT*CLTPFC
Trigger: GCAAAAAGGCGTTAAACAGCAAGTGTCATCTACATC...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR GCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCAGGCTACTTAGTAAATaGCTCAGGATGGCCAAAAAT +
Preference number: 2 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPRLLSK*LRMAKN
Trigger: ATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCCT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR GCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCATCATAGTACCTGAGTaGAAACAGTATTCACTGGCT +
Preference number: 2 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPIIVPE*KQYSLA
Trigger: AGCCAGTGAATACTGTTTGCACTCAGGTACTATGAT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCTACCATGATTCTCATTaGGTTTTTAAGGCACCCAAA +
Preference number: 2 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPYHDSH*VFKAPK
Trigger: TTTGGGTGCCTTAAAAACTCAATGAGAATCATGGTA...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR CCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCATAAAGCCTCTAGGTTaGTACTTGATTTGTTTGCTC +
Preference number: 2 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPIKPLG*YLICLL
Trigger: GAGCAAACAAATCAAGTACCAACCTAGAGGCTTTAT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR TCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCAGGCTAGGATGTAGATaGCACTTGCTGTTTAACGCC +
Preference number: 2 (lower is better)
Translates to: KKENLWMIHPVYISATGLRLGCR*HLLFNA
Trigger: GGCGTTAAACAGCAAGTGTCATCTACATCCTAGCCT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
3UTR-3UTR TCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGAGGCTAGGATGTAGATaGCACTTGCTGTTTAACGCC +
Preference number: 2 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMRLGCR*HLLFNA
Trigger: GGCGTTAAACAGCAAGTGTCATCTACATCCTAGCCT...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
3UTR-3UTR GCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAGATGTAGATGACACTTaGTGTTTAACGCCTTTTTGC +
Preference number: 2 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVDVDDT*CLTPFC
Trigger: GCAAAAAGGCGTTAAACAGCAAGTGTCATCTACATC...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
3UTR-3UTR TCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGGGTCTCCTGCTTTTATaGTTCTCCTTGACAAAATCC +
Preference number: 2 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMGLLLL*FSLTKS
Trigger: GGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACC...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
3UTR-3UTR TCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGTCTCCTGCTTTTATaGTTCTCCTTGACAAAATCC +
Preference number: 2 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFGLLLL*FSLTKS
Trigger: GGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACC...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
3UTR-3UTR GCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCGATGTAGATGACACTTaGTGTTTAACGCCTTTTTGC +
Preference number: 2 (lower is better)
Translates to: KKENLWMIHPVYISATGLDVDDT*CLTPFC
Trigger: GCAAAAAGGCGTTAAACAGCAAGTGTCATCTACATC...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
3UTR-3UTR GCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGATGTAGATGACACTTaGTGTTTAACGCCTTTTTGC +
Preference number: 2 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFDVDDT*CLTPFC
Trigger: GCAAAAAGGCGTTAAACAGCAAGTGTCATCTACATC...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
3UTR-3UTR TCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGTTTTATGATTCTCCTTaGCAAAATCCACGTGACAGT +
Preference number: 2 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMFYDSP*QNPRDS
Trigger: ACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAA...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
3UTR CAA 90 bp ACACACACACACACCATGAATCAATTCAAAAATAAAGCCTCTAGGTaGGTACTTGATTTGTTTGCTCTCTTCATATATTCAGTGCTTCTT +
Preference number: 2 (lower is better)
Translates to: THTHTMNQFKNKASR*VLDLFALFIYSVLL
Trigger: AAGAAGCACTGAATATATGAAGAGAGCAAACAAATCAAGTACCAACCTAGAGGCTTTATTTTTGAATTGATTCATGGTGTGTGTGTGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCCCTCTAGGTTGGTACTaGATTTGTTTGCTCTCTTCA +
Preference number: 3 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPPLGWY*ICLLSS
Trigger: TGAAGAGAGCAAACAAATCAAGTACCAACCTAGAGG...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCAATAAAGCCTCTAGGTaGGTACTTGATTTGTTTGCT +
Preference number: 3 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPNKASR*VLDLFA
Trigger: AGCAAACAAATCAAGTACCAACCTAGAGGCTTTATT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCGAGGGACAGTCTTCTTaGCTATTTTTATGGCAATAT +
Preference number: 3 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPEGQSS*LFLWQY
Trigger: ATATTGCCATAAAAATAGCAAAGAAGACTGTCCCTC...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR CCA 72 bp CCGTTGAATGCAGTCATTGTCAGCTTCATAACTCAGTaGGCTGATCATGTGTGTGCTGATCTAGAAAATTAT +
Preference number: 3 (lower is better)
Translates to: PLNAVIVSFITQ*ADHVCADLENY
Trigger: ATAATTTTCTAGATCAGCACACACATGATCAGCCCACTGAGTTATGAAGCTGACAATGACTGCATTCAACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR TCA 72 bp ACATCTTATAGCCATTATTGGACCCATTCTACATTTTaGAAGACTAAGAGAATAGGGTTAGCTATGGGAAAT +
Preference number: 3 (lower is better)
Translates to: TSYSHYWTHSTF*KTKRIGLAMGN
Trigger: ATTTCCCATAGCTAACCCTATTCTCTTAGTCTTTCAAAATGTAGAATGGGTCCAATAATGGCTATAAGATGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCTTCCGTGGCTGTTGTTaGGTAGATTCAAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPFRGCC*VDSKEG
Trigger: CCCCTCCTTTGAATCTACCCAACAACAGCCACGGAA...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCTTCAAAGGAGGGGAATaGCTCGCCTTGAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPFKGGE*LALRFE
Trigger: CTCAAATCTCAAGGCGAGTCATTCCCCTCCTTTGAA...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCAGCATTGGGATGTGCTaGGATGGGCAAAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPSIGMC*DGQKIF
Trigger: GAAGATCTTTTGCCCATCTCAGCACATCCCAATGCT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTACTGCCATGGCCCCGTTaGATGCAGTCATTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVLPWPR*MQSLSA
Trigger: AGCTGACAATGACTGCATTCAACGGGGCCATGGCAG...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCCACAGTTGTCCTGTCTaGAAGGAATCTGTCGTGCAT +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPHSCPV*KESVVH
Trigger: ATGCACGACAGATTCCTTTCAGACAGGACAACTGTG...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCGGGAATGACTCGCCTTaGGATTTGAGGTGGTTATAT +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPGNDSP*DLRWLY
Trigger: ATATAACCACCTCAAATCTCAAGGCGAGTCATTCCC...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGAGCGCCCAGGAACCTaGCTGACCTGCTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFERPGT*LTCFSA
Trigger: AGCTGAGAAGCAGGTCAGTCAGGTTCCTGGGCGCTC...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529533.6
CDS-3UTR TCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGTGACAATGTCGCACTaGGCAGGAGGGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFVTMSH*AGGCQG
Trigger: TCCCTGGCACCCTCCTGCTCAGTGCGACATTGTCAC...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529533.6
CDS-3UTR GCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCGTTAGCTATGGGAAATaGTGGCTCACTGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPVSYGK*WLTGRI
Trigger: GATTCTTCCAGTGAGCCAGCATTTCCCATAGCTAAC...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCTGGGATGTGCTGAGATaGGCAAAAGATCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPWDVLR*AKDLHL
Trigger: CAGATGAAGATCTTTTGCCCATCTCAGCACATCCCA...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCGGTCTCCTGCTTTTATaGTTCTCCTTGACAAAATCC +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPGLLLL*FSLTKS
Trigger: GGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACC...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTATTCCGTGGCTGTTGTTaGGTAGATTCAAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVFRGCC*VDSKEG
Trigger: CCCCTCCTTTGAATCTACCCAACAACAGCCACGGAA...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAGGTAAGCCATCCACTTaGTTCCACTATCAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVGKPST*FHYQGG
Trigger: ACCCCCTTGATAGTGGAACCAAGTGGATGGCTTACC...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCTACAGAAGTACGAAGTaGAGGTATGTCATCCATAGG +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPYRSTK*RYVIHR
Trigger: CCTATGGATGACATACCTCCACTTCGTACTTCTGTA...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTATTCAAAGGAGGGGAATaGCTCGCCTTGAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVFKGGE*LALRFE
Trigger: CTCAAATCTCAAGGCGAGTCATTCCCCTCCTTTGAA...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAGCATTGGGATGTGCTaGGATGGGCAAAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVSIGMC*DGQKIF
Trigger: GAAGATCTTTTGCCCATCTCAGCACATCCCAATGCT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCACTTTCTGGCATGGCTaGATCATTCAAAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPTFWHG*IIQSWI
Trigger: AATCCAACTTTGAATGATTCAGCCATGCCAGAAAGT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGCTGCCATGGCCCCGTTaGATGCAGTCATTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMLPWPR*MQSLSA
Trigger: AGCTGACAATGACTGCATTCAACGGGGCCATGGCAG...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTACACAGTTGTCCTGTCTaGAAGGAATCTGTCGTGCAT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVHSCPV*KESVVH
Trigger: ATGCACGACAGATTCCTTTCAGACAGGACAACTGTG...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCCAAAAGATCTTCATCTaGTATAGGTGCATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPQKIFI*YRCIPR
Trigger: CCTTGGAATGCACCTATAGCAGATGAAGATCTTTTG...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTACATGGCCCCGTTGAATaGAGTCATTGTCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVHGPVE*SHCQLH
Trigger: ATGAAGCTGACAATGACTGCATTCAACGGGGCCATG...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGGCTGGCTGTATCTTaGTTGTGTAACAGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFGLAVS*LCNRAP
Trigger: GGGCGCTCTGTTACACAAGCAAGATACAGCCAGCCC...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCCTGCTGATGAGTTACTaGAGAAATCTGTTATTCCGT +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPLLMSY*RNLLFR
Trigger: ACGGAATAACAGATTTCTCCAGTAACTCATCAGCAG...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
3UTR CAA 72 bp ATCCTGCATTTTCCAACTTCCCCACTCCTAGAAGTTTaGCTAACAGGAATTGCAACTAGGAATGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: ILHFPTSPLLEV*LTGIATRNASP
Trigger: AGGTGAGGCATTCCTAGTTGCAATTCCTGTTAGCAAAACTTCTAGGAGTGGGGAAGTTGGAAAATGCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCACTCGCCTTGAGATTTaGGGTGGTTATATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPTRLEI*GGYIFF
Trigger: AAAGAAAATATAACCACCTCAAATCTCAAGGCGAGT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCTTTTATGATTCTCCTTaGCAAAATCCACGTGACAGT +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPFYDSP*QNPRDS
Trigger: ACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAA...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCACCCATTCTACATTTTaGAAGACTAAGAGAATAGGG +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPTHSTF*KTKRIG
Trigger: CCCTATTCTCTTAGTCTTTCAAAATGTAGAATGGGT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTATCACTGGAAGAATCCTaGATTTTCCAACTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVSLEES*IFQLPH
Trigger: GTGGGGAAGTTGGAAAATGCAGGATTCTTCCAGTGA...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAGTTAGCTATGGGAAATaGTGGCTCACTGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVVSYGK*WLTGRI
Trigger: GATTCTTCCAGTGAGCCAGCATTTCCCATAGCTAAC...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTATGGGATGTGCTGAGATaGGCAAAAGATCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVWDVLR*AKDLHL
Trigger: CAGATGAAGATCTTTTGCCCATCTCAGCACATCCCA...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCGGTAAGCCATCCACTTaGTTCCACTATCAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLGKPST*FHYQGG
Trigger: ACCCCCTTGATAGTGGAACCAAGTGGATGGCTTACC...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCGTAAATGCCTCAGGATaGCCAAAAATTGTAAGAAAG +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPVNASG*PKIVRK
Trigger: CTTTCTTACAATTTTTGGCCATCCTGAGGCATTTAC...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAGCTTCATAACTCAGTaGGCTGATCATGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVSFITQ*ADHVCA
Trigger: AGCACACACATGATCAGCCCACTGAGTTATGAAGCT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAAGCTATTACTTTCCTaGGTAGGGTCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVKLLLS*VGSAFL
Trigger: CAGGAAAGCTGACCCTACCCAGGAAAGTAATAGCTT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCTTCAAAGGAGGGGAATaGCTCGCCTTGAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLFKGGE*LALRFE
Trigger: CTCAAATCTCAAGGCGAGTCATTCCCCTCCTTTGAA...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAGGAATGCCATCACGTaGATTTTCTTCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVRNAIT*IFFTFW
Trigger: CCAGAAAGTGAAGAAAATGCACGTGATGGCATTCCT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTATCCTGTCTACATTTCTaGTACTGGTCTCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVSCLHF*YWSPAF
Trigger: AAAAGCAGGAGACCAGTAGCAGAAATGTAGACAGGA...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCCATGGCCCCGTTGAATaGAGTCATTGTCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLHGPVE*SHCQLH
Trigger: ATGAAGCTGACAATGACTGCATTCAACGGGGCCATG...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCAGGGACAGTCTTCTTTaGTATTTTTATGGCAATATG +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPRDSLL*YFYGNM
Trigger: CATATTGCCATAAAAATAGCAAAGAAGACTGTCCCT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGTTCCGTGGCTGTTGTTaGGTAGATTCAAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMFRGCC*VDSKEG
Trigger: CCCCTCCTTTGAATCTACCCAACAACAGCCACGGAA...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTTTCCGTGGCTGTTGTTaGGTAGATTCAAAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFFRGCC*VDSKEG
Trigger: CCCCTCCTTTGAATCTACCCAACAACAGCCACGGAA...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTATTAGAAACAAAGCTATaGATCAAGGGAGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVLETKL*IKGGLV
Trigger: CACAAGCCCTCCCTTGATCCATAGCTTTGTTTCTAA...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGGGTAAGCCATCCACTTaGTTCCACTATCAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMGKPST*FHYQGG
Trigger: ACCCCCTTGATAGTGGAACCAAGTGGATGGCTTACC...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGTAAGCCATCCACTTaGTTCCACTATCAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFGKPST*FHYQGG
Trigger: ACCCCCTTGATAGTGGAACCAAGTGGATGGCTTACC...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTATACAGAAGTACGAAGTaGAGGTATGTCATCCATAGG +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVYRSTK*RYVIHR
Trigger: CCTATGGATGACATACCTCCACTTCGTACTTCTGTA...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAAAATTAGGTGGGGCTaGCTGTATCTTGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVKIRWG*LYLACV
Trigger: TACACAAGCAAGATACAGCCAGCCCCACCTAATTTT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCATTAGAGAAAACAGATaGGTTAAGTGTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPIRENR*VKCDNV
Trigger: GACATTGTCACACTTAACCCATCTGTTTTCTCTAAT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529533.6
CDS-3UTR TCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTTTCAAAGGAGGGGAATaGCTCGCCTTGAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFFKGGE*LALRFE
Trigger: CTCAAATCTCAAGGCGAGTCATTCCCCTCCTTTGAA...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTAGCATTGGGATGTGCTaGGATGGGCAAAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFSIGMC*DGQKIF
Trigger: GAAGATCTTTTGCCCATCTCAGCACATCCCAATGCT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGAGCATTGGGATGTGCTaGGATGGGCAAAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMSIGMC*DGQKIF
Trigger: GAAGATCTTTTGCCCATCTCAGCACATCCCAATGCT...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAACTTTCTGGCATGGCTaGATCATTCAAAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVTFWHG*IIQSWI
Trigger: AATCCAACTTTGAATGATTCAGCCATGCCAGAAAGT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTAGGCTAGGATGTAGATaGCACTTGCTGTTTAACGCC +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFRLGCR*HLLFNA
Trigger: GGCGTTAAACAGCAAGTGTCATCTACATCCTAGCCT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCATGTGGGTTTTAGACTaGCCAAAGAATGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLMWVLD*PKNALL
Trigger: CAGCAGAGCATTCTTTGGGCAGTCTAAAACCCACAT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAGGCTACTTAGTAAATaGCTCAGGATGGCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVRLLSK*LRMAKN
Trigger: ATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCCT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGCATGGCCCCGTTGAATaGAGTCATTGTCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMHGPVE*SHCQLH
Trigger: ATGAAGCTGACAATGACTGCATTCAACGGGGCCATG...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAATCATAGTACCTGAGTaGAAACAGTATTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVIIVPE*KQYSLA
Trigger: AGCCAGTGAATACTGTTTGCACTCAGGTACTATGAT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCGTTAGCTATGGGAAATaGTGGCTCACTGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLVSYGK*WLTGRI
Trigger: GATTCTTCCAGTGAGCCAGCATTTCCCATAGCTAAC...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAGAAAGGAATCTGTCGTaGATTAGAGAAAACAGATGG +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVERNLS*IRENRW
Trigger: CCATCTGTTTTCTCTAATGCACGACAGATTCCTTTC...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTACTGCTGATGAGTTACTaGAGAAATCTGTTATTCCGT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVLLMSY*RNLLFR
Trigger: ACGGAATAACAGATTTCTCCAGTAACTCATCAGCAG...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAATCGCAGAACTTTTTaGGGATCTGACGTATTTGGA +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVNRRTF*GSDVFG
Trigger: TCCAAATACGTCAGATCCCCAAAAAGTTCTGCGATT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281268.12
ENST00000527569.1
CDS-3UTR CCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTACTTCACTTTCTGGCATaGCTGAATCATTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVLHFLA*LNHSKL
Trigger: CAACTTTGAATGATTCAGCCATGCCAGAAAGTGAAG...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCAGCTTCATAACTCAGTaGGCTGATCATGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLSFITQ*ADHVCA
Trigger: AGCACACACATGATCAGCCCACTGAGTTATGAAGCT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAACTCGCCTTGAGATTTaGGGTGGTTATATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVTRLEI*GGYIFF
Trigger: AAAGAAAATATAACCACCTCAAATCTCAAGGCGAGT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAACTTTTTGGGGATCTaGCGTATTTGGAAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVNFLGI*RIWKEF
Trigger: AAACTCTTTCCAAATACGTCAGATCCCCAAAAAGTT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000281268.12
ENST00000527569.1
CDS-3UTR TCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTATTTTATGATTCTCCTTaGCAAAATCCACGTGACAGT +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVFYDSP*QNPRDS
Trigger: ACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAA...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTATACCATGATTCTCATTaGGTTTTTAAGGCACCCAAA +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVYHDSH*VFKAPK
Trigger: TTTGGGTGCCTTAAAAACTCAATGAGAATCATGGTA...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTATGTGGGTTTTAGACTaGCCAAAGAATGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFMWVLD*PKNALL
Trigger: CAGCAGAGCATTCTTTGGGCAGTCTAAAACCCACAT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCAGGAATGCCATCACGTaGATTTTCTTCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLRNAIT*IFFTFW
Trigger: CCAGAAAGTGAAGAAAATGCACGTGATGGCATTCCT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCTCCTGTCTACATTTCTaGTACTGGTCTCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLSCLHF*YWSPAF
Trigger: AAAAGCAGGAGACCAGTAGCAGAAATGTAGACAGGA...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGTCACTGGAAGAATCCTaGATTTTCCAACTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMSLEES*IFQLPH
Trigger: GTGGGGAAGTTGGAAAATGCAGGATTCTTCCAGTGA...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTTCACTGGAAGAATCCTaGATTTTCCAACTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFSLEES*IFQLPH
Trigger: GTGGGGAAGTTGGAAAATGCAGGATTCTTCCAGTGA...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGGTTAGCTATGGGAAATaGTGGCTCACTGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMVSYGK*WLTGRI
Trigger: GATTCTTCCAGTGAGCCAGCATTTCCCATAGCTAAC...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCTTAGAAACAAAGCTATaGATCAAGGGAGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLLETKL*IKGGLV
Trigger: CACAAGCCCTCCCTTGATCCATAGCTTTGTTTCTAA...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGTGGGATGTGCTGAGATaGGCAAAAGATCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMWDVLR*AKDLHL
Trigger: CAGATGAAGATCTTTTGCCCATCTCAGCACATCCCA...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTTGGGATGTGCTGAGATaGGCAAAAGATCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFWDVLR*AKDLHL
Trigger: CAGATGAAGATCTTTTGCCCATCTCAGCACATCCCA...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCTACAGAAGTACGAAGTaGAGGTATGTCATCCATAGG +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLYRSTK*RYVIHR
Trigger: CCTATGGATGACATACCTCCACTTCGTACTTCTGTA...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTAGCTTCATAACTCAGTaGGCTGATCATGTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFSFITQ*ADHVCA
Trigger: AGCACACACATGATCAGCCCACTGAGTTATGAAGCT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGAAGCTATTACTTTCCTaGGTAGGGTCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMKLLLS*VGSAFL
Trigger: CAGGAAAGCTGACCCTACCCAGGAAAGTAATAGCTT...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTAAGCTATTACTTTCCTaGGTAGGGTCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFKLLLS*VGSAFL
Trigger: CAGGAAAGCTGACCCTACCCAGGAAAGTAATAGCTT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCTTCATCTGCTATAGGTaGATTCCAAGGCACTTTAGA +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLFICYR*IPRHFR
Trigger: TCTAAAGTGCCTTGGAATGCACCTATAGCAGATGAA...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTAGGAATGCCATCACGTaGATTTTCTTCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFRNAIT*IFFTFW
Trigger: CCAGAAAGTGAAGAAAATGCACGTGATGGCATTCCT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGAGGAATGCCATCACGTaGATTTTCTTCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMRNAIT*IFFTFW
Trigger: CCAGAAAGTGAAGAAAATGCACGTGATGGCATTCCT...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTTCCTGTCTACATTTCTaGTACTGGTCTCCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFSCLHF*YWSPAF
Trigger: AAAAGCAGGAGACCAGTAGCAGAAATGTAGACAGGA...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCAGGCTACTTAGTAAATaGCTCAGGATGGCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLRLLSK*LRMAKN
Trigger: ATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCCT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAGGGACAGTCTTCTTTaGTATTTTTATGGCAATATG +
Preference number: 4 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVRDSLL*YFYGNM
Trigger: CATATTGCCATAAAAATAGCAAAGAAGACTGTCCCT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCGAAAGGAATCTGTCGTaGATTAGAGAAAACAGATGG +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLERNLS*IRENRW
Trigger: CCATCTGTTTTCTCTAATGCACGACAGATTCCTTTC...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCAAATCTGTTATTCCGTaGCTGTTGTTGGGTAGATTC +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLKSVIP*LLLGRF
Trigger: GAATCTACCCAACAACAGCCACGGAATAACAGATTT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTTTAGAAACAAAGCTATaGATCAAGGGAGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFLETKL*IKGGLV
Trigger: CACAAGCCCTCCCTTGATCCATAGCTTTGTTTCTAA...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCAATCGCAGAACTTTTTaGGGATCTGACGTATTTGGA +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLNRRTF*GSDVFG
Trigger: TCCAAATACGTCAGATCCCCAAAAAGTTCTGCGATT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281268.12
ENST00000527569.1
CDS-3UTR CCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCCTTCACTTTCTGGCATaGCTGAATCATTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLLHFLA*LNHSKL
Trigger: CAACTTTGAATGATTCAGCCATGCCAGAAAGTGAAG...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGTACAGAAGTACGAAGTaGAGGTATGTCATCCATAGG +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMYRSTK*RYVIHR
Trigger: CCTATGGATGACATACCTCCACTTCGTACTTCTGTA...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCACTCGCCTTGAGATTTaGGGTGGTTATATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLTRLEI*GGYIFF
Trigger: AAAGAAAATATAACCACCTCAAATCTCAAGGCGAGT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCAACTTTTTGGGGATCTaGCGTATTTGGAAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLNFLGI*RIWKEF
Trigger: AAACTCTTTCCAAATACGTCAGATCCCCAAAAAGTT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281268.12
ENST00000527569.1
CDS-3UTR TCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCTTTTATGATTCTCCTTaGCAAAATCCACGTGACAGT +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLFYDSP*QNPRDS
Trigger: ACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAA...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCACCCATTCTACATTTTaGAAGACTAAGAGAATAGGG +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLTHSTF*KTKRIG
Trigger: CCCTATTCTCTTAGTCTTTCAAAATGTAGAATGGGT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCTTCTTTTTGGGGATCTaGCGTATTTGGAAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLFFLGI*RIWKEF
Trigger: AAACTCTTTCCAAATACGTCAGATCCCCAAAAAGAA...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCTTTACAATCAGGAACTaGAATATCACAGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLFTIRN*NITVVL
Trigger: CAGGACAACTGTGATATTTCAGTTCCTGATTGTAAA...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTTTCATCTGCTATAGGTaGATTCCAAGGCACTTTAGA +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFFICYR*IPRHFR
Trigger: TCTAAAGTGCCTTGGAATGCACCTATAGCAGATGAA...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGTTCATCTGCTATAGGTaGATTCCAAGGCACTTTAGA +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMFICYR*IPRHFR
Trigger: TCTAAAGTGCCTTGGAATGCACCTATAGCAGATGAA...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGCAAAAGATCTTCATCTaGTATAGGTGCATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMQKIFI*YRCIPR
Trigger: CCTTGGAATGCACCTATAGCAGATGAAGATCTTTTG...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTCAAAAGATCTTCATCTaGTATAGGTGCATTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFQKIFI*YRCIPR
Trigger: CCTTGGAATGCACCTATAGCAGATGAAGATCTTTTG...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGAGGCTACTTAGTAAATaGCTCAGGATGGCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMRLLSK*LRMAKN
Trigger: ATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCCT...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR GCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGATCATAGTACCTGAGTaGAAACAGTATTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMIIVPE*KQYSLA
Trigger: AGCCAGTGAATACTGTTTGCACTCAGGTACTATGAT...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGCTGCTGATGAGTTACTaGAGAAATCTGTTATTCCGT +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMLLMSY*RNLLFR
Trigger: ACGGAATAACAGATTTCTCCAGTAACTCATCAGCAG...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTCTGCTGATGAGTTACTaGAGAAATCTGTTATTCCGT +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFLLMSY*RNLLFR
Trigger: ACGGAATAACAGATTTCTCCAGTAACTCATCAGCAG...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGCTTCACTTTCTGGCATaGCTGAATCATTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMLHFLA*LNHSKL
Trigger: CAACTTTGAATGATTCAGCCATGCCAGAAAGTGAAG...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCATAAAGCCTCTAGGTTaGTACTTGATTTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: KKENLWMIHPVYISATGLIKPLG*YLICLL
Trigger: GAGCAAACAAATCAAGTACCAACCTAGAGGCTTTAT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGACTCGCCTTGAGATTTaGGGTGGTTATATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMTRLEI*GGYIFF
Trigger: AAAGAAAATATAACCACCTCAAATCTCAAGGCGAGT...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR TCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTTACCATGATTCTCATTaGGTTTTTAAGGCACCCAAA +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFYHDSH*VFKAPK
Trigger: TTTGGGTGCCTTAAAAACTCAATGAGAATCATGGTA...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGTTCTTTTTGGGGATCTaGCGTATTTGGAAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMFFLGI*RIWKEF
Trigger: AAACTCTTTCCAAATACGTCAGATCCCCAAAAAGAA...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTTTCTTTTTGGGGATCTaGCGTATTTGGAAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFFFLGI*RIWKEF
Trigger: AAACTCTTTCCAAATACGTCAGATCCCCAAAAAGAA...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR TCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTTTTACAATCAGGAACTaGAATATCACAGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFFTIRN*NITVVL
Trigger: CAGGACAACTGTGATATTTCAGTTCCTGATTGTAAA...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGGTAAATGCCTCAGGATaGCCAAAAATTGTAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMVNASG*PKIVRK
Trigger: CTTTCTTACAATTTTTGGCCATCCTGAGGCATTTAC...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGTAAATGCCTCAGGATaGCCAAAAATTGTAAGAAAG +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFVNASG*PKIVRK
Trigger: CTTTCTTACAATTTTTGGCCATCCTGAGGCATTTAC...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTATAAAGCCTCTAGGTTaGTACTTGATTTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFIKPLG*YLICLL
Trigger: GAGCAAACAAATCAAGTACCAACCTAGAGGCTTTAT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGATAAAGCCTCTAGGTTaGTACTTGATTTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMIKPLG*YLICLL
Trigger: GAGCAAACAAATCAAGTACCAACCTAGAGGCTTTAT...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTAGGGACAGTCTTCTTTaGTATTTTTATGGCAATATG +
Preference number: 4 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFRDSLL*YFYGNM
Trigger: CATATTGCCATAAAAATAGCAAAGAAGACTGTCCCT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR GCA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGAGGGACAGTCTTCTTTaGTATTTTTATGGCAATATG +
Preference number: 4 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMRDSLL*YFYGNM
Trigger: CATATTGCCATAAAAATAGCAAAGAAGACTGTCCCT...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCAGAGCAGGTGTAGCATaGGGATGTGCTGAGATGGGC +
Preference number: 5 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPRAGVA*GCAEMG
Trigger: GCCCATCTCAGCACATCCCAATGCTACACCTGCTCT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS CCA 90 bp GTTGTCCTGTCTGAAAGGAATCTGTCGTGCATTAGAGAAAACAGATaGGTTAAGTGTGACAATGTCGCACTGAGCAGGAGGGTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: VVLSERNLSCIRENR*VKCDNVALSRRVPG
Trigger: CCCTGGCACCCTCCTGCTCAGTGCGACATTGTCACACTTAACCCATCTGTTTTCTCTAATGCACGACAGATTCCTTTCAGACAGGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTACCTGCCATGGCCCCGTaGAATGCAGTCATTGTCAGC +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVPAMAP*NAVIVS
Trigger: GCTGACAATGACTGCATTCAACGGGGCCATGGCAGG...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAGAGCAGGTGTAGCATaGGGATGTGCTGAGATGGGC +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVRAGVA*GCAEMG
Trigger: GCCCATCTCAGCACATCCCAATGCTACACCTGCTCT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCAGAAGAGGGCTAATGTaGTTTCTTCACCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPRRGLM*FLHLSP
Trigger: TGGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCGTTATTCCGTGGCTGTaGTTGGGTAGATTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPVIPWL*LGRFKG
Trigger: TCCTTTGAATCTACCCAACAACAGCCACGGAATAAC...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCGTTTTCACGGTGTCATaGACCAAAGACCAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPVFTVS*TKDQVK
Trigger: CTTCACTTGGTCTTTGGTCAATGACACCGTGAAAAC...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCCCTGCCATGGCCCCGTaGAATGCAGTCATTGTCAGC +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLPAMAP*NAVIVS
Trigger: GCTGACAATGACTGCATTCAACGGGGCCATGGCAGG...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS GCA 90 bp CAGGAATTGAAGTCATCCGTTATTCAGAACCCCACCATGAAATTTTaGTGGAGTAAGGTCCAGGAGATTTGGCCGAAGTTTGACCTCATG +
Preference number: 5 (lower is better)
Translates to: QELKSSVIQNPTMKF*WSKVQEIWPKFDLM
Trigger: CATGAGGTCAAACTTCGGCCAAATCTCCTGGACCTTACTCCAGCAAAATTTCATGGTGGGGTTCTGAATAACGGATGACTTCAATTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648230.1
CDS CCA 90 bp GAATTGAAGTCATCCGTTATTCAGAACCCCACCATGAAATTTTGCTaGAGTAAGGTCCAGGAGATTTGGCCGAAGTTTGACCTCATGCCA +
Preference number: 5 (lower is better)
Translates to: ELKSSVIQNPTMKFC*SKVQEIWPKFDLMP
Trigger: TGGCATGAGGTCAAACTTCGGCCAAATCTCCTGGACCTTACTCCAGCAAAATTTCATGGTGGGGTTCTGAATAACGGATGACTTCAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648230.1
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAATTCCGTGGCTGTTGTaGGGTAGATTCAAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVIPWLL*GRFKGG
Trigger: CCCTCCTTTGAATCTACCCAACAACAGCCACGGAAT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTCCTGCCATGGCCCCGTaGAATGCAGTCATTGTCAGC +
Preference number: 5 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFPAMAP*NAVIVS
Trigger: GCTGACAATGACTGCATTCAACGGGGCCATGGCAGG...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCACTCAGGTGACATATTaGTTCGATAATGGAGGGACA +
Preference number: 5 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPTQVTY*FDNGGT
Trigger: TGTCCCTCCATTATCGAACAAATATGTCACCTGAGT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCCTGGCTGTATCTTGCTaGTGTAACAGAGCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLLAVSC*CNRAPR
Trigger: CCTGGGCGCTCTGTTACACAAGCAAGATACAGCCAG...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529533.6
CDS-3UTR CAA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTAGAGCAGGTGTAGCATaGGGATGTGCTGAGATGGGC +
Preference number: 5 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFRAGVA*GCAEMG
Trigger: GCCCATCTCAGCACATCCCAATGCTACACCTGCTCT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGAGAGCAGGTGTAGCATaGGGATGTGCTGAGATGGGC +
Preference number: 5 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMRAGVA*GCAEMG
Trigger: GCCCATCTCAGCACATCCCAATGCTACACCTGCTCT...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCGGTCTGTCATTTCTATaGCCTCAATTTCCCAATAAC +
Preference number: 5 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPGLSFL*PQFPNN
Trigger: GTTATTGGGAAATTGAGGCAATAGAAATGACAGACC...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAAGAAGAGGGCTAATGTaGTTTCTTCACCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVRRGLM*FLHLSP
Trigger: TGGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCACTGAAATATCACAGTaGTCCTGTCTGAAAGGAATC +
Preference number: 5 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPTEISQ*SCLKGI
Trigger: GATTCCTTTCAGACAGGACAACTGTGATATTTCAGT...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455601.6
ENST00000529533.6
CDS CCA 90 bp ATGTGGGTTTTAGACTGCCCAAAGAATGCTCTGCTGATGAGTTACTaGAGAAATCTGTTATTCCGTGGCTGTTGTTGGGTAGATTCAAAG +
Preference number: 5 (lower is better)
Translates to: MWVLDCPKNALLMSY*RNLLFRGCCWVDSK
Trigger: CTTTGAATCTACCCAACAACAGCCACGGAATAACAGATTTCTCCAGTAACTCATCAGCAGAGCATTCTTTGGGCAGTCTAAAACCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
ENST00000648230.1
CDS CCA 90 bp TCATCTGCTATAGGTGCATTCCAAGGCACTTTAGAAACAAAGCTATaGATCAAGGGAGGGCTTGTGGAAATGGTAGATGTGGGTTTTAGA +
Preference number: 5 (lower is better)
Translates to: SSAIGAFQGTLETKL*IKGGLVEMVDVGFR
Trigger: TCTAAAACCCACATCTACCATTTCCACAAGCCCTCCCTTGATCCATAGCTTTGTTTCTAAAGTGCCTTGGAATGCACCTATAGCAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
ENST00000648230.1
CDS-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCGAAATCAACAGAATTTaGGCTAAGGCCAACATTGTA +
Preference number: 5 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPEINRI*AKANIV
Trigger: TACAATGTTGGCCTTAGCCAAAATTCTGTTGATTTC...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAGTTATTCCGTGGCTGTaGTTGGGTAGATTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVVIPWL*LGRFKG
Trigger: TCCTTTGAATCTACCCAACAACAGCCACGGAATAAC...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAGTTTTCACGGTGTCATaGACCAAAGACCAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVVFTVS*TKDQVK
Trigger: CTTCACTTGGTCTTTGGTCAATGACACCGTGAAAAC...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGGGAATCAAGAGAGGAGAGAAGAGGGCTAATGTTGTTTCTTCACCTCTCCCCCTGTTTAACGCCTTTTaGCTGTTAGTTCTATACAGA +
Preference number: 5 (lower is better)
Translates to: KGIKRGEKRANVVSSPLPLFNAF*LLVLYR
Trigger: TCTGTATAGAACTAACAGCAAAAAGGCGTTAAACAG...GGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCTCTCCTCTCTTGATTCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS TCA 90 bp TCTGTTATTCCGTGGCTGTTGTTGGGTAGATTCAAAGGAGGGGAATaGCTCGCCTTGAGATTTGAGGTGGTTATATTTTCTTTATCTGAG +
Preference number: 5 (lower is better)
Translates to: SVIPWLLLGRFKGGE*LALRFEVVIFSLSE
Trigger: CTCAGATAAAGAAAATATAACCACCTCAAATCTCAAGGCGAGTCATTCCCCTCCTTTGAATCTACCCAACAACAGCCACGGAATAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
ENST00000648230.1
CDS-3UTR CAA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTATTCCGTGGCTGTTGTaGGGTAGATTCAAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFIPWLL*GRFKGG
Trigger: CCCTCCTTTGAATCTACCCAACAACAGCCACGGAAT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAACTCAGGTGACATATTaGTTCGATAATGGAGGGACA +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVTQVTY*FDNGGT
Trigger: TGTCCCTCCATTATCGAACAAATATGTCACCTGAGT...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCAGAAGAGGGCTAATGTaGTTTCTTCACCTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLRRGLM*FLHLSP
Trigger: TGGGGAGAGGTGAAGAAACAACATTAGCCCTCTTCT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTACCACTCCTAGAAGTTTaGCTAACAGGAATTGCAACT +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVPLLEV*LTGIAT
Trigger: AGTTGCAATTCCTGTTAGCAAAACTTCTAGGAGTGG...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS CCA 90 bp CTGTTTAACGCCTTTTTGCTGTTAGTTCTATACAGAAGTACGAAGTaGAGGTATGTCATCCATAGGAATGCCATCACGTGCATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LFNAFLLLVLYRSTK*RYVIHRNAITCIFF
Trigger: GAAGAAAATGCACGTGATGGCATTCCTATGGATGACATACCTCCACTTCGTACTTCTGTATAGAACTAACAGCAAAAAGGCGTTAAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCGTTATTCCGTGGCTGTaGTTGGGTAGATTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLVIPWL*LGRFKG
Trigger: TCCTTTGAATCTACCCAACAACAGCCACGGAATAAC...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCGTTTTCACGGTGTCATaGACCAAAGACCAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLVFTVS*TKDQVK
Trigger: CTTCACTTGGTCTTTGGTCAATGACACCGTGAAAAC...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS TCA 90 bp CATAGGAATGCCATCACGTGCATTTTCTTCACTTTCTGGCATGGCTaGATCATTCAAAGTTGGATTGTAGTAGCTAGAATTCCCAAAACT +
Preference number: 5 (lower is better)
Translates to: HRNAITCIFFTFWHG*IIQSWIVVARIPKT
Trigger: AGTTTTGGGAATTCTAGCTACTACAATCCAACTTTGAATGATTCAGCCATGCCAGAAAGTGAAGAAAATGCACGTGATGGCATTCCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAGAAATCAACAGAATTTaGGCTAAGGCCAACATTGTA +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVEINRI*AKANIV
Trigger: TACAATGTTGGCCTTAGCCAAAATTCTGTTGATTTC...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGGTTATTCCGTGGCTGTaGTTGGGTAGATTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMVIPWL*LGRFKG
Trigger: TCCTTTGAATCTACCCAACAACAGCCACGGAATAAC...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGTTTTCACGGTGTCATaGACCAAAGACCAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFVFTVS*TKDQVK
Trigger: CTTCACTTGGTCTTTGGTCAATGACACCGTGAAAAC...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTAGGGGATCTGACGTATTaGGAAAGAGTTTTGAATTAT +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVGDLTY*ERVLNY
Trigger: ATAATTCAAAACTCTTTCCAAATACGTCAGATCCCC...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTACTGTTTAACGCCTTTTaGCTGTTAGTTCTATACAGA +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVLFNAF*LLVLYR
Trigger: TCTGTATAGAACTAACAGCAAAAAGGCGTTAAACAG...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCCCTCTAGGTTGGTACTaGATTTGTTTGCTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLPLGWY*ICLLSS
Trigger: TGAAGAGAGCAAACAAATCAAGTACCAACCTAGAGG...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTACTTTCATTAAGTAGTTaGACAATCTGTGACCCACAA +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVLSLSS*TICDPQ
Trigger: TTGTGGGTCACAGATTGTCAAACTACTTAATGAAAG...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp TGCTACTGGTCTCCTGCTTTTATGATTCTCCTTGACAAAATCCACGTGACAGTATGTGGCAAGAATAGATaGTATTATGCCCATTTTGCA +
Preference number: 5 (lower is better)
Translates to: CYWSPAFMILLDKIHVTVCGKNR*YYAHFA
Trigger: TGCAAAATGGGCATAATACAATCTATTCTTGCCACA...TACTGTCACGTGGATTTTGTCAAGGAGAATCATAAAAGCAGGAGACCAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCGGTCTGTCATTTCTATaGCCTCAATTTCCCAATAAC +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLGLSFL*PQFPNN
Trigger: GTTATTGGGAAATTGAGGCAATAGAAATGACAGACC...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTACTCAGGTGACATATTaGTTCGATAATGGAGGGACA +
Preference number: 5 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFTQVTY*FDNGGT
Trigger: TGTCCCTCCATTATCGAACAAATATGTCACCTGAGT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGCCACTCCTAGAAGTTTaGCTAACAGGAATTGCAACT +
Preference number: 5 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMPLLEV*LTGIAT
Trigger: AGTTGCAATTCCTGTTAGCAAAACTTCTAGGAGTGG...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCGGGGATCTGACGTATTaGGAAAGAGTTTTGAATTAT +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLGDLTY*ERVLNY
Trigger: ATAATTCAAAACTCTTTCCAAATACGTCAGATCCCC...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGTCTGTCATTTCTATaGCCTCAATTTCCCAATAAC +
Preference number: 5 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFGLSFL*PQFPNN
Trigger: GTTATTGGGAAATTGAGGCAATAGAAATGACAGACC...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCAATAAAGCCTCTAGGTaGGTACTTGATTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLNKASR*VLDLFA
Trigger: AGCAAACAAATCAAGTACCAACCTAGAGGCTTTATT...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCGAGGGACAGTCTTCTTaGCTATTTTTATGGCAATAT +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLEGQSS*LFLWQY
Trigger: ATATTGCCATAAAAATAGCAAAGAAGACTGTCCCTC...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCCTTTCATTAAGTAGTTaGACAATCTGTGACCCACAA +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLLSLSS*TICDPQ
Trigger: TTGTGGGTCACAGATTGTCAAACTACTTAATGAAAG...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTACTGAAATATCACAGTaGTCCTGTCTGAAAGGAATC +
Preference number: 5 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFTEISQ*SCLKGI
Trigger: GATTCCTTTCAGACAGGACAACTGTGATATTTCAGT...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp AAGAAAGAAAACCTTTGGATGATACATCCTGTCTACATTTCTGCTACTGGTCTCTGTGGCAAGAATAGATaGTATTATGCCCATTTTGCA +
Preference number: 5 (lower is better)
Translates to: KKENLWMIHPVYISATGLCGKNR*YYAHFA
Trigger: TGCAAAATGGGCATAATACAATCTATTCTTGCCACA...GAGACCAGTAGCAGAAATGTAGACAGGATGTATCATCCAAAGGTTTTCTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGAAATCAACAGAATTTaGGCTAAGGCCAACATTGTA +
Preference number: 5 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFEINRI*AKANIV
Trigger: TACAATGTTGGCCTTAGCCAAAATTCTGTTGATTTC...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGGGGGATCTGACGTATTaGGAAAGAGTTTTGAATTAT +
Preference number: 5 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMGDLTY*ERVLNY
Trigger: ATAATTCAAAACTCTTTCCAAATACGTCAGATCCCC...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp GGCTACTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTCTGTTTAACGCCTTTTaGCTGTTAGTTCTATACAGA +
Preference number: 5 (lower is better)
Translates to: GYLVNASGWPKIVRKKTFLFNAF*LLVLYR
Trigger: TCTGTATAGAACTAACAGCAAAAAGGCGTTAAACAG...AAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAGTAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGCTGTTTAACGCCTTTTaGCTGTTAGTTCTATACAGA +
Preference number: 5 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMLFNAF*LLVLYR
Trigger: TCTGTATAGAACTAACAGCAAAAAGGCGTTAAACAG...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS-3UTR CAA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGAATAAAGCCTCTAGGTaGGTACTTGATTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMNKASR*VLDLFA
Trigger: AGCAAACAAATCAAGTACCAACCTAGAGGCTTTATT...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGGAGGGACAGTCTTCTTaGCTATTTTTATGGCAATAT +
Preference number: 5 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMEGQSS*LFLWQY
Trigger: ATATTGCCATAAAAATAGCAAAGAAGACTGTCCCTC...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS-3UTR CAA 90 bp CTTAGTAAATGCCTCAGGATGGCCAAAAATTGTAAGAAAGAAAACCTTTGGATGCTTTCATTAAGTAGTTaGACAATCTGTGACCCACAA +
Preference number: 5 (lower is better)
Translates to: LSKCLRMAKNCKKENLWMLSLSS*TICDPQ
Trigger: TTGTGGGTCACAGATTGTCAAACTACTTAATGAAAG...CATCCAAAGGTTTTCTTTCTTACAATTTTTGGCCATCCTGAGGCATTTACTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000529533.6
CDS TCA 72 bp GAGAAAACAGATGGGTTAAGTGTGACAATGTCGCACTaGGCAGGAGGGTGCCAGGGAAACAAAATTAGGTGG +
Preference number: 6 (lower is better)
Translates to: EKTDGLSVTMSH*AGGCQGNKIRW
Trigger: CCACCTAATTTTGTTTCCCTGGCACCCTCCTGCTCAGTGCGACATTGTCACACTTAACCCATCTGTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529533.6
CDS CCA 72 bp AGTGAAGCTATCACTGTTTGTGGTAAGCCATCCACTTaGTTCCACTATCAAGGGGGTCACAGATGGAGAAGT +
Preference number: 6 (lower is better)
Translates to: SEAITVCGKPST*FHYQGGHRWRS
Trigger: ACTTCTCCATCTGTGACCCCCTTGATAGTGGAACCAAGTGGATGGCTTACCACAAACAGTGATAGCTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
ENST00000648230.1
CDS TCA 72 bp CCGTGGCTGTTGTTGGGTAGATTCAAAGGAGGGGAATaGCTCGCCTTGAGATTTGAGGTGGTTATATTTTCT +
Preference number: 6 (lower is better)
Translates to: PWLLLGRFKGGE*LALRFEVVIFS
Trigger: AGAAAATATAACCACCTCAAATCTCAAGGCGAGTCATTCCCCTCCTTTGAATCTACCCAACAACAGCCACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
ENST00000648230.1
CDS CCA 72 bp TCTGAAAGGAATCTGTCGTGCATTAGAGAAAACAGATaGGTTAAGTGTGACAATGTCGCACTGAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SERNLSCIRENR*VKCDNVALSRR
Trigger: CCTCCTGCTCAGTGCGACATTGTCACACTTAACCCATCTGTTTTCTCTAATGCACGACAGATTCCTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529533.6
CDS CCA 72 bp TCATCCGTTATTCAGAACCCCACCATGAAATTTTGCTaGAGTAAGGTCCAGGAGATTTGGCCGAAGTTTGAC +
Preference number: 6 (lower is better)
Translates to: SSVIQNPTMKFC*SKVQEIWPKFD
Trigger: GTCAAACTTCGGCCAAATCTCCTGGACCTTACTCCAGCAAAATTTCATGGTGGGGTTCTGAATAACGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648230.1
CDS CAA 90 bp ACCAAAGACCAAGTGAAGTTTTCTGAAGACAGAGCAGGTGTAGCATaGGGATGTGCTGAGATGGGCAAAAGATCTTCATCTGCTATAGGT +
Preference number: 6 (lower is better)
Translates to: TKDQVKFSEDRAGVA*GCAEMGKRSSSAIG
Trigger: ACCTATAGCAGATGAAGATCTTTTGCCCATCTCAGCACATCCCAATGCTACACCTGCTCTGTCTTCAGAAAACTTCACTTGGTCTTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
ENST00000648230.1
CDS CCA 72 bp GCCTTTTTGCTGTTAGTTCTATACAGAAGTACGAAGTaGAGGTATGTCATCCATAGGAATGCCATCACGTGC +
Preference number: 6 (lower is better)
Translates to: AFLLLVLYRSTK*RYVIHRNAITC
Trigger: GCACGTGATGGCATTCCTATGGATGACATACCTCCACTTCGTACTTCTGTATAGAACTAACAGCAAAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS TCA 72 bp GCCATCACGTGCATTTTCTTCACTTTCTGGCATGGCTaGATCATTCAAAGTTGGATTGTAGTAGCTAGAATT +
Preference number: 6 (lower is better)
Translates to: AITCIFFTFWHG*IIQSWIVVARI
Trigger: AATTCTAGCTACTACAATCCAACTTTGAATGATTCAGCCATGCCAGAAAGTGAAGAAAATGCACGTGATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281268.12
ENST00000436318.6
ENST00000455601.6
ENST00000527569.1
ENST00000529533.6
CDS CAA 90 bp TTCAGGCTTAGGAGGTATTTACAATCAGGAACTGAAATATCACAGTaGTCCTGTCTGAAAGGAATCTGTCGTGCATTAGAGAAAACAGAT +
Preference number: 6 (lower is better)
Translates to: FRLRRYLQSGTEISQ*SCLKGICRALEKTD
Trigger: ATCTGTTTTCTCTAATGCACGACAGATTCCTTTCAGACAGGACAACTGTGATATTTCAGTTCCTGATTGTAAATACCTCCTAAGCCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527569.1
ENST00000529533.6
CDS GCA 72 bp AATATCACAGTTGTCCTGTCTGAAAGGAATCTGTCGTaGATTAGAGAAAACAGATGGGTTAAGTGTGACAAT +
Preference number: 6 (lower is better)
Translates to: NITVVLSERNLS*IRENRWVKCDN
Trigger: ATTGTCACACTTAACCCATCTGTTTTCTCTAATGCACGACAGATTCCTTTCAGACAGGACAACTGTGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529533.6