Pregenerated sensors for MTX2 (Homo sapiens)
Ensembl gene IDs: ENSG00000128654Ensembl transcript IDs: ENST00000249442.11, ENST00000420864.5, ENST00000423461.6
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCACACCACTGAAGATACAGCTCTGCAGTCAACAGCATATTGTTaGCTAATTCCATGTAAGCTTTCATTTCTGCTTTTTGGACTTCCT | + |
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Preference number: 1 (lower is better) Translates to: HHTTEDTALQSTAYC*LIPCKLSFLLFGLP Trigger: AGGAAGTCCAAAAAGCAGAAATGAAAGCTTACATGGAATTAGTCAACAATATGCTGTTGACTGCAGAGCTGTATCTTCAGTGGTGTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| 3UTR TCA 90 bp | AGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCTaGTACTACTTGATTTCCCACATGAATAAAAGGTACTTTACCAGA | + |
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Preference number: 1 (lower is better) Translates to: RMALGFNKLDYWTKF*YYLISHMNKRYFTR Trigger: TCTGGTAAAGTACCTTTTATTCATGTGGGAAATCAAGTAGTATCAGAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420864.5 ENST00000423461.6 |
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| 3UTR-3UTR TCA 90 bp | TTAAGACTCCTGAGACTAACACATAACTCTATGACAGCCTGCCTTTACCACGATGCTTCATCACACCACTaGAGATACAGCTCTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LRLLRLTHNSMTACLYHDASSHH*RYSSAV Trigger: GACTGCAGAGCTGTATCTTCAGTGGTGTGATGAAGC...ATCGTGGTAAAGGCAGGCTGTCATAGAGTTATGTGTTAGTCTCAGGAGTCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| 3UTR-3UTR GCA 90 bp | ATCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCTTCAGGCCAAGGTTCTaGAGCTATATACATCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: ITKRMALGFNKLDYWTKFFRPRF*SYIHQS Trigger: TGACTGATGTATATAGCTGCAGAACCTTGGCCTGAA...GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| 3UTR-3UTR CCA 90 bp | TTAAGACTCCTGAGACTAACACATAACTCTATGACAGCCTGCCTTTACCACGATCCATCACTAAGAGAATaGCCCTTGGCTTTAACAAAT | + |
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Preference number: 2 (lower is better) Translates to: LRLLRLTHNSMTACLYHDPSLRE*PLALTN Trigger: ATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGATGG...ATCGTGGTAAAGGCAGGCTGTCATAGAGTTATGTGTTAGTCTCAGGAGTCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| 3UTR CAA 90 bp | TTACCAGATGGAGACATATATTCTGCATTTGCCCTACAAACTACTTaGATAGGCAAGTTACACATTTGCAAAAAGGCCTGCACTGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: LPDGDIYSAFALQTT*IGKLHICKKACTAR Trigger: TCTTGCAGTGCAGGCCTTTTTGCAAATGTGTAACTTGCCTATCAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| 3UTR-3UTR TCA 90 bp | TACTTTACCAGATGGAGACATATATTCTGCATTTGCCCTACAAACTACTTTGATTTTAAAAATTTTCCATaGATCCGCGCGGGCGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: YFTRWRHIFCICPTNYFDFKNFP*IRAGVV Trigger: CACCACGCCCGCGCGGATTCATGGAAAATTTTTAAA...ATCAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| 3UTR-3UTR TCA 90 bp | TTAAGACTCCTGAGACTAACACATAACTCTATGACAGCCTGCCTTTACCACGATCTTTCATCTTACGTTTaGCTTCCCACTGTTTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LRLLRLTHNSMTACLYHDLSSYV*LPTVFD Trigger: ATCAAAAACAGTGGGAAGTCAAACGTAAGATGAAAG...ATCGTGGTAAAGGCAGGCTGTCATAGAGTTATGTGTTAGTCTCAGGAGTCTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| 3UTR-3UTR GCA 90 bp | CCTACAAACTACTTTGATAGGCAAGTTACACATTTGCAAAAAGGCCTGCACTGCTGGAGACATATATTCTaGATTTGCCCTACAAACTAC | + |
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Preference number: 2 (lower is better) Translates to: PTNYFDRQVTHLQKGLHCWRHIF*ICPTNY Trigger: GTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCA...GCAGTGCAGGCCTTTTTGCAAATGTGTAACTTGCCTATCAAAGTAGTTTGTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| 3UTR-3UTR CCA 90 bp | AACATATTTCAAAAGTTAAGACTCCTGAGACTAACACATAACTCTATGACAGCCACATCCTCTAAGACCTaGTCCAGAGTCTTCTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: NIFQKLRLLRLTHNSMTATSSKT*SRVFFP Trigger: GGGAAAGAAGACTCTGGACCAGGTCTTAGAGGATGT...GGCTGTCATAGAGTTATGTGTTAGTCTCAGGAGTCTTAACTTTTGAAATATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| 3UTR CAA 90 bp | TTACCAGATGGAGACATATATTCTGCATTTGCCCTACAAACTACTTaGATAGGCAAGTTACACATTTGCAAAAAGGCCTGTGAATGTAAT | + |
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Preference number: 2 (lower is better) Translates to: LPDGDIYSAFALQTT*IGKLHICKKACECN Trigger: ATTACATTCACAGGCCTTTTTGCAAATGTGTAACTTGCCTATCAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| 3UTR TCA 72 bp | ACTGAAGATACAGCTCTGCAGTCAACAGCATATTGTTaGCTAATTCCATGTAAGCTTTCATTTCTGCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: TEDTALQSTAYC*LIPCKLSFLLF Trigger: AAAAAGCAGAAATGAAAGCTTACATGGAATTAGTCAACAATATGCTGTTGACTGCAGAGCTGTATCTTCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR TCA 90 bp | CAAAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTACTCTGCAGCGGCGGCTGCAGTaGGGCCCCCAAGGTTACCGC | + |
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Preference number: 4 (lower is better) Translates to: QSQVHFPNQSISHCRSTLQRRLQ*GPQGYR Trigger: GCGGTAACCTTGGGGGCCTCACTGCAGCCGCCGCTG...CAGAGTACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR TCA 90 bp | GGTACTTTACCAGATGGAGACATATATTCTGCATTTGCCCTACAAACTACTTTGCAGCGGCGGCTGCAGTaGGGCCCCCAAGGTTACCGC | + |
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Preference number: 4 (lower is better) Translates to: GTLPDGDIYSAFALQTTLQRRLQ*GPQGYR Trigger: GCGGTAACCTTGGGGGCCTCACTGCAGCCGCCGCTG...CAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000420864.5 ENST00000423461.6 |
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| CDS-3UTR GCA 90 bp | TTAAGACTCCTGAGACTAACACATAACTCTATGACAGCCTGCCTTTACCACGATAACAGCAGCGGCGGCTaGAGTGAGGCCCCCAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LRLLRLTHNSMTACLYHDNSSGG*SEAPKV Trigger: AACCTTGGGGGCCTCACTGCAGCCGCCGCTGCTGTT...ATCGTGGTAAAGGCAGGCTGTCATAGAGTTATGTGTTAGTCTCAGGAGTCTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CCA 90 bp | ATCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCGGTTACCGCCAGGCCTaGCTAGGGACTTCCGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: ITKRMALGFNKLDYWTKFGYRQA*LGTSGA Trigger: TGCGCCGGAAGTCCCTAGCCAGGCCTGGCGGTAACC...GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR GCA 90 bp | CAAAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTACTCTGAACAGCAGCGGCGGCTaGAGTGAGGCCCCCAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: QSQVHFPNQSISHCRSTLNSSGG*SEAPKV Trigger: AACCTTGGGGGCCTCACTGCAGCCGCCGCTGCTGTT...CAGAGTACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR TCA 90 bp | ATCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCAAGCGGAGGTTGCAGTaGGCCCAGGTTGTGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: ITKRMALGFNKLDYWTKFKRRLQ*AQVVPL Trigger: CAGTGGCACAACCTGGGCTCACTGCAACCTCCGCTT...GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR GCA 90 bp | ATCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCCACTGCACTCCAGCCTaGAATCTGGGAGACGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: ITKRMALGFNKLDYWTKFHCTPA*NLGDEG Trigger: GCCTTCGTCTCCCAGATTGCAGGCTGGAGTGCAGTG...GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR GCA 90 bp | ATCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCCCCAGGTTGTGCCACTaGACTCCAGCCTGCAATCTG | + |
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Preference number: 4 (lower is better) Translates to: ITKRMALGFNKLDYWTKFPRLCH*TPACNL Trigger: CAGATTGCAGGCTGGAGTGCAGTGGCACAACCTGGG...GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CCA 90 bp | AAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTACTCTGGTTCTGCAGCTGCAATCTaGGAGACGAAGGCTTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: KPGSFSKPIYFTLQKYSGSAAAI*ETKASA Trigger: GGCGGAAGCCTTCGTCTCCCAGATTGCAGCTGCAGA...ACCAGAGTACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR TCA 90 bp | GCCAAGGTTCTGCAGCTATATACATCAGTCATGTTCAGTCCACCGACTCAAAAGTTTAAAAATTTTCCATaGATCCGCGCGGGCGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: AKVLQLYTSVMFSPPTQKFKNFP*IRAGVV Trigger: CACCACGCCCGCGCGGATTCATGGAAAATTTTTAAA...CTTTTGAGTCGGTGGACTGAACATGACTGATGTATATAGCTGCAGAACCTTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR GCA 90 bp | TCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCTCCAAGGTTCTGCAGCTaGAATCTGGGAGACGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SLREWPLALTNWTIGPSSPRFCS*NLGDEG Trigger: GCCTTCGTCTCCCAGATTGCAGCTGCAGAACCTTGG...AGAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR CCA 90 bp | TACTTTACCAGATGGAGACATATATTCTGCATTTGCCCTACAAACTACTTTGATCTCCAGCCTGCAATCTaGGAGACGAAGGCTTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: YFTRWRHIFCICPTNYFDLQPAI*ETKASA Trigger: GGCGGAAGCCTTCGTCTCCCAGATTGCAGGCTGGAG...ATCAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR GCA 90 bp | ATAGCAAAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTACTTCAGGCCAAGGTTCTaGAGCTGCAATCTGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: IAKPGSFSKPIYFTLQKYFRPRF*SCNLGD Trigger: GTCTCCCAGATTGCAGCTGCAGAACCTTGGCCTGAA...GTACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTTTGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR TCA 90 bp | ATCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCGATCCATACCTAGCATaGGTGATCTCCCCTACTGTA | + |
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Preference number: 4 (lower is better) Translates to: ITKRMALGFNKLDYWTKFDPYLA*VISPTV Trigger: TACAGTAGGGGAGATCACTCATGCTAGGTATGGATC...GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR GCA 90 bp | AGGTTCTGCAGCTATATACATCAGTCATGTTCAGTCCACCGACTCAAAAGTATTGGCAAGTTACACATTTaGAAAAAGGCCTGCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: RFCSYIHQSCSVHRLKSIGKLHI*KKACTA Trigger: TGCAGTGCAGGCCTTTTTGCAAATGTGTAACTTGCC...AATACTTTTGAGTCGGTGGACTGAACATGACTGATGTATATAGCTGCAGAACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CCA 90 bp | GGTACTTTACCAGATGGAGACATATATTCTGCATTTGCCCTACAAACTACTTTGACATCCTCTAAGACCTaGTCCAGAGTCTTCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: GTLPDGDIYSAFALQTTLTSSKT*SRVFFP Trigger: GGGAAAGAAGACTCTGGACCAGGTCTTAGAGGATGT...CAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR TCA 90 bp | AACATATTTCAAAAGTTAAGACTCCTGAGACTAACACATAACTCTATGACAGCCGCTTCATCACACCACTaGAGATACAGCTCTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: NIFQKLRLLRLTHNSMTAASSHH*RYSSAV Trigger: GACTGCAGAGCTGTATCTTCAGTGGTGTGATGAAGC...GGCTGTCATAGAGTTATGTGTTAGTCTCAGGAGTCTTAACTTTTGAAATATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR GCA 90 bp | AGGTTCTGCAGCTATATACATCAGTCATGTTCAGTCCACCGACTCAAAAGTATTAACTCTATGACAGCCTaGCTTTACCACGATCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: RFCSYIHQSCSVHRLKSINSMTA*LYHDLQ Trigger: TTGAAGATCGTGGTAAAGGCAGGCTGTCATAGAGTT...AATACTTTTGAGTCGGTGGACTGAACATGACTGATGTATATAGCTGCAGAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR GCA 90 bp | AAAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTACTCTGGATAGATTCACTGCACTaGAAGAGAAGCTGCATTGTC | + |
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Preference number: 4 (lower is better) Translates to: KARFIFQTNLFHTAEVLWIDSLH*KRSCIV Trigger: GACAATGCAGCTTCTCTTGCAGTGCAGTGAATCTAT...CCAGAGTACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR GCA 90 bp | TCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCTCTGAAGATACAGCTCTaGAGTCAACAGCATATTGTT | + |
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Preference number: 4 (lower is better) Translates to: SLREWPLALTNWTIGPSSLKIQL*SQQHIV Trigger: AACAATATGCTGTTGACTGCAGAGCTGTATCTTCAG...AGAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR GCA 90 bp | CAAAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTACTCTGGGCAAGTTACACATTTaGAAAAAGGCCTGTGAATGT | + |
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Preference number: 4 (lower is better) Translates to: QSQVHFPNQSISHCRSTLGKLHI*KKACEC Trigger: ACATTCACAGGCCTTTTTGCAAATGTGTAACTTGCC...CAGAGTACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR TCA 90 bp | ATCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCCTTTCATCTTACGTTTaGCTTCCCACTGTTTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: ITKRMALGFNKLDYWTKFLSSYV*LPTVFD Trigger: ATCAAAAACAGTGGGAAGTCAAACGTAAGATGAAAG...GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR GCA 90 bp | CAAAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTACTCTGTGGAGACATATATTCTaGATTTGCCCTACAAACTAC | + |
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Preference number: 4 (lower is better) Translates to: QSQVHFPNQSISHCRSTLWRHIF*ICPTNY Trigger: GTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCA...CAGAGTACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR GCA 90 bp | GGTACTTTACCAGATGGAGACATATATTCTGCATTTGCCCTACAAACTACTTTGGTAAGCTTTCATTTCTaGTTTTTGGACTTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GTLPDGDIYSAFALQTTLVSFHF*FLDFLQ Trigger: CTGGAGGAAGTCCAAAAAGCAGAAATGAAAGCTTAC...CAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CCA 90 bp | CCTACAAACTACTTTGATAGGCAAGTTACACATTTGCAAAAAGGCCTGCACTGCAGGTACTTTACCAGATaGAGACATATATTCTGCATT | + |
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Preference number: 4 (lower is better) Translates to: PTNYFDRQVTHLQKGLHCRYFTR*RHIFCI Trigger: AATGCAGAATATATGTCTCCATCTGGTAAAGTACCT...GCAGTGCAGGCCTTTTTGCAAATGTGTAACTTGCCTATCAAAGTAGTTTGTAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CCA 90 bp | ATAGCAAAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTACCCATCACTAAGAGAATaGCCCTTGGCTTTAACAAAT | + |
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Preference number: 4 (lower is better) Translates to: IAKPGSFSKPIYFTLQKYPSLRE*PLALTN Trigger: ATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGATGG...GTACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTTTGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR GCA 90 bp | GGTACTTTACCAGATGGAGACATATATTCTGCATTTGCCCTACAAACTACTTTGTCAAGTTCAGTAGGCTaGTTATTGAAGAAATACGGT | + |
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Preference number: 4 (lower is better) Translates to: GTLPDGDIYSAFALQTTLSSSVG*LLKKYG Trigger: ACCGTATTTCTTCAATAAGCAGCCTACTGAACTTGA...CAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR GCA 90 bp | AACATATTTCAAAAGTTAAGACTCCTGAGACTAACACATAACTCTATGACAGCCTTCAGGCCAAGGTTCTaGAGCTATATACATCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: NIFQKLRLLRLTHNSMTAFRPRF*SYIHQS Trigger: TGACTGATGTATATAGCTGCAGAACCTTGGCCTGAA...GGCTGTCATAGAGTTATGTGTTAGTCTCAGGAGTCTTAACTTTTGAAATATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CCA 90 bp | ATCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCAGGTACTTTACCAGATaGAGACATATATTCTGCATT | + |
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Preference number: 4 (lower is better) Translates to: ITKRMALGFNKLDYWTKFRYFTR*RHIFCI Trigger: AATGCAGAATATATGTCTCCATCTGGTAAAGTACCT...GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420864.5 ENST00000423461.6 |
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| CDS-3UTR CCA 90 bp | ATCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCTTGGCTTTAACAAATTaGACTATTGGACCAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: ITKRMALGFNKLDYWTKFLALTN*TIGPSS Trigger: AGAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAA...GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420864.5 ENST00000423461.6 |
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| CDS-3UTR CCA 90 bp | TATAGCAAAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTATTGGCTTTAACAAATTaGACTATTGGACCAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: YSKARFIFQTNLFHTAEVLALTN*TIGPSS Trigger: AGAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAA...TACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTTTGCTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS TCA 90 bp | CGTTCAGACTCGCAAAGCCCACTCCAACAGCAGCGGCGGCTGCAGTaGGGCCCCCAAGGTTACCGCCAGGCCTGGCTAGGGACTTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: RSDSQSPLQQQRRLQ*GPQGYRQAWLGTSG Trigger: GCCGGAAGTCCCTAGCCAGGCCTGGCGGTAACCTTGGGGGCCTCACTGCAGCCGCCGCTGCTGTTGGAGTGGGCTTTGCGAGTCTGAACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CAA 90 bp | TACTTTACCAGATGGAGACATATATTCTGCATTTGCCCTACAAACTACTTTGATAGGCAGGAGAATCGCTaGAACCCGGGAAGCGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: YFTRWRHIFCICPTNYFDRQENR*NPGSGG Trigger: ACCTCCGCTTCCCGGGTTCAAGCGATTCTCCTGCCT...ATCAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CAA 90 bp | AGGTTCTGCAGCTATATACATCAGTCATGTTCAGTCCACCGACTCAAAAGTATTAGGCAAGTTACACATTaGCAAAAAGGCCTGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: RFCSYIHQSCSVHRLKSIRQVTH*QKGLHC Trigger: GCAGTGCAGGCCTTTTTGCAAATGTGTAACTTGCCT...AATACTTTTGAGTCGGTGGACTGAACATGACTGATGTATATAGCTGCAGAACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CAA 90 bp | CCTACAAACTACTTTGATAGGCAAGTTACACATTTGCAAAAAGGCCTGCACTGCCTAAGAGAATGGCCCTaGGCTTTAACAAATTGGACT | + |
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Preference number: 5 (lower is better) Translates to: PTNYFDRQVTHLQKGLHCLREWP*ALTNWT Trigger: AGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAG...GCAGTGCAGGCCTTTTTGCAAATGTGTAACTTGCCTATCAAAGTAGTTTGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CAA 90 bp | TTAAGACTCCTGAGACTAACACATAACTCTATGACAGCCTGCCTTTACCACGATGCAAGAGAAGCTGCATaGTCAGAAAGTAAAATTTGC | + |
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Preference number: 5 (lower is better) Translates to: LRLLRLTHNSMTACLYHDAREAA*SESKIC Trigger: GCAAATTTTACTTTCTGACAATGCAGCTTCTCTTGC...ATCGTGGTAAAGGCAGGCTGTCATAGAGTTATGTGTTAGTCTCAGGAGTCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CAA 90 bp | GCAAAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTACTCTGCAAGAGAAGCTGCATaGTCAGAAAGTAAAATTTGC | + |
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Preference number: 5 (lower is better) Translates to: AKPGSFSKPIYFTLQKYSAREAA*SESKIC Trigger: GCAAATTTTACTTTCTGACAATGCAGCTTCTCTTGC...AGAGTACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR CAA 90 bp | ATCACTAAGAGAATGGCCCTTGGCTTTAACAAATTGGACTATTGGACCAAGTTCGCCCTACAAACTACTTaGATAGGCAAGTTACACATT | + |
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Preference number: 5 (lower is better) Translates to: ITKRMALGFNKLDYWTKFALQTT*IGKLHI Trigger: AATGTGTAACTTGCCTATCAAAGTAGTTTGTAGGGC...GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420864.5 ENST00000423461.6 |
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| CDS-3UTR CAA 90 bp | AAAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTACTCTGGGCCCTACAAACTACTTaGATAGGCAAGTTACACATT | + |
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Preference number: 5 (lower is better) Translates to: KARFIFQTNLFHTAEVLWALQTT*IGKLHI Trigger: AATGTGTAACTTGCCTATCAAAGTAGTTTGTAGGGC...CCAGAGTACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR CAA 90 bp | GGTACTTTACCAGATGGAGACATATATTCTGCATTTGCCCTACAAACTACTTTGCTAAGAGAATGGCCCTaGGCTTTAACAAATTGGACT | + |
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Preference number: 5 (lower is better) Translates to: GTLPDGDIYSAFALQTTLLREWP*ALTNWT Trigger: AGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAG...CAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420864.5 ENST00000423461.6 |
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| CDS-3UTR CAA 90 bp | AGGTTCTGCAGCTATATACATCAGTCATGTTCAGTCCACCGACTCAAAAGTATTATTGAAGAAATACGGTaGTGTTCCCAGTCTTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: RFCSYIHQSCSVHRLKSIIEEIR*CSQSLR Trigger: TCTCAAAGACTGGGAACACAACCGTATTTCTTCAAT...AATACTTTTGAGTCGGTGGACTGAACATGACTGATGTATATAGCTGCAGAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CAA 90 bp | AGGTTCTGCAGCTATATACATCAGTCATGTTCAGTCCACCGACTCAAAAGTATTTCAGTAGGCTGCTTATaGAAGAAATACGGTTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: RFCSYIHQSCSVHRLKSISVGCL*KKYGCV Trigger: AACACAACCGTATTTCTTCAATAAGCAGCCTACTGA...AATACTTTTGAGTCGGTGGACTGAACATGACTGATGTATATAGCTGCAGAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420864.5 |
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| CDS-3UTR CAA 90 bp | TATAGCAAAGCCAGGTTCATTTTCCAAACCAATCTATTTCACACTGCAGAAGTACTTGGCTTTAACAAATaGGACTATTGGACCAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: YSKARFIFQTNLFHTAEVLGFNK*DYWTKF Trigger: GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAG...TACTTCTGCAGTGTGAAATAGATTGGTTTGGAAAATGAACCTGGCTTTGCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423461.6 |
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| CDS-3UTR CAA 90 bp | TACTTTACCAGATGGAGACATATATTCTGCATTTGCCCTACAAACTACTTTGATCTTGGCTTTAACAAATaGGACTATTGGACCAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: YFTRWRHIFCICPTNYFDLGFNK*DYWTKF Trigger: GAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAG...ATCAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420864.5 ENST00000423461.6 |
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| CDS TCA 72 bp | TCGCAAAGCCCACTCCAACAGCAGCGGCGGCTGCAGTaGGGCCCCCAAGGTTACCGCCAGGCCTGGCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: SQSPLQQQRRLQ*GPQGYRQAWLG Trigger: CCCTAGCCAGGCCTGGCGGTAACCTTGGGGGCCTCACTGCAGCCGCCGCTGCTGTTGGAGTGGGCTTTGCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000249442.11 ENST00000420864.5 |
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