RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTUS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000129422

Ensembl transcript IDs: ENST00000262102.10, ENST00000297488.10, ENST00000381861.7, ENST00000381869.5, ENST00000517413.5, ENST00000517818.5, ENST00000518713.5, ENST00000518755.1, ENST00000518792.5, ENST00000518889.1, ENST00000518891.1, ENST00000518975.1, ENST00000519066.5, ENST00000519263.5, ENST00000520196.5, ENST00000521635.5, ENST00000521772.5, ENST00000521882.5, ENST00000522757.5, ENST00000523183.5, ENST00000523471.5, ENST00000523718.5, ENST00000524044.5, ENST00000544260.3, ENST00000634613.1

Found 1335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGCATTACCAGAATTGTTGCTGTAAGTGCTCAGCTCACTGTGGGTaGTGGCTATTGAGGGGGTGCTTCCTGTCCTCCGCAGCGCAGGAC +
Preference number: 1 (lower is better)
Translates to: RHYQNCCCKCSAHCG*WLLRGCFLSSAAQD
Trigger: GTCCTGCGCTGCGGAGGACAGGAAGCACCCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCACTTACAGCAACAATTCTGGTAATGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR TCA 90 bp CTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAC +
Preference number: 1 (lower is better)
Translates to: LPPEFQSQKLRFRRW*RSSYPTVITRVLIY
Trigger: GTATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 90 bp TGCTGTAAGTGCTCAGCTCACTGTGGGTGCTGGCTATTGAGGGGGTaGTTCCTGTCCTCCGCAGCGCAGGACTTTTCAAAGATGCTTTGG +
Preference number: 1 (lower is better)
Translates to: CCKCSAHCGCWLLRG*FLSSAAQDFSKMLW
Trigger: CCAAAGCATCTTTGAAAAGTCCTGCGCTGCGGAGGACAGGAAGCACCCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCACTTACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR GCA 90 bp TCCAGTTACCCTACGGTGATCACACGTGTGCTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGGTCAGTCCTGCAGACCTGCATCAAA +
Preference number: 1 (lower is better)
Translates to: SSYPTVITRVLIYLL*PRSSLGSVLQTCIK
Trigger: TTTGATGCAGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAGCACACGTGTGATCACCGTAGGGTAACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 90 bp ATAGAGAGTCGCTTGTTGACTTTCGACTCCTTCTCCAGCGACTCTTaGAGAACAGCCTGCTCCGTGGAAAGCTGCCTTGAGATTGCCATG +
Preference number: 1 (lower is better)
Translates to: IESRLLTFDSFSSDS*RTACSVESCLEIAM
Trigger: CATGGCAATCTCAAGGCAGCTTTCCACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR GCA 90 bp TGCTTCCTCCCGCTCAGACAGCAGGTGCTGAATCACAACTGTCAATaGCTCAAACTTGGTATTACCACAGGCAAGAAGCTGCTTGAGCTG +
Preference number: 1 (lower is better)
Translates to: CFLPLRQQVLNHNCQ*LKLGITTGKKLLEL
Trigger: CAGCTCAAGCAGCTTCTTGCCTGTGGTAATACCAAGTTTGAGGCATTGACAGTTGTGATTCAGCACCTGCTGTCTGAGCGGGAGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CCA 90 bp AAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATaGGAAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGG +
Preference number: 1 (lower is better)
Translates to: KCNLEESWTSHIFHS*ERSGPFCYFPKDKG
Trigger: CCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR TCA 90 bp CGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATaGATGGCAAACCCAACTTTGGCTAATGTCATTGAGAACAACTTG +
Preference number: 1 (lower is better)
Translates to: RRTAGNNTRFTMPRG*MANPTLANVIENNL
Trigger: CAAGTTGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CCA 90 bp GCCATGTGCTTGTCCATCCGAGCTTTCAATTCTTCATTCTCCTGCTaGAAACGCTTCAATTTGTCAACCAATGCTGTGTTGTTGTCCACC +
Preference number: 1 (lower is better)
Translates to: AMCLSIRAFNSSFSC*KRFNLSTNAVLLST
Trigger: GGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATTGAAAGCTCGGATGGACAAGCACATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR TCA 90 bp TCAAAGCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTaGGCAGAGTTGGTGGTAGATGATCATAATTCAAGCAACTATTGC +
Preference number: 1 (lower is better)
Translates to: SKLFLLYPLPTLLQG*AELVVDDHNSSNYC
Trigger: GCAATAGTTGCTTGAATTATGATCATCTACCACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CCA 90 bp GGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATaGCAAACCCAACTTTGGCTAATGTCATTGAGAACAACTTGGAAG +
Preference number: 1 (lower is better)
Translates to: GQQGTTQDLPCLGDE*QTQLWLMSLRTTWK
Trigger: CTTCCAAGTTGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 90 bp ATTGCCATGTGCTTGTCCATCCGAGCTTTCAATTCTTCATTCTCCTaGTGGAAACGCTTCAATTTGTCAACCAATGCTGTGTTGTTGTCC +
Preference number: 1 (lower is better)
Translates to: IAMCLSIRAFNSSFS*WKRFNLSTNAVLLS
Trigger: GGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATTGAAAGCTCGGATGGACAAGCACATGGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR TCA 90 bp GCAAACCCAACTTTGGCTAATGTCATTGAGAACAACTTGGAAGCGTaGGCAGAGATATCTCATGAAGTGGCAGTGAACCTACATTTCCAT +
Preference number: 1 (lower is better)
Translates to: ANPTLANVIENNLEA*AEISHEVAVNLHFH
Trigger: ATGGAAATGTAGGTTCACTGCCACTTCATGAGATATCTCTGCTCACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAGTTGGGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR TCA 90 bp GTGAACATGAGCCCTGGATACCAAAGGCTTCAAATAAAAGGATCCTaGGGAACCATTCTGAAATGCTGGTTTTGGAGGTTTCTCCTCATA +
Preference number: 1 (lower is better)
Translates to: VNMSPGYQRLQIKGS*GTILKCWFWRFLLI
Trigger: TATGAGGAGAAACCTCCAAAACCAGCATTTCAGAATGGTTCCTCAGGATCCTTTTATTTGAAGCCTTTGGTATCCAGGGCTCATGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CCA 90 bp ACACAAGATTTACCATGCCTAGGGGATGAATGGCAAACCCAACTTTaGCTAATGTCATTGAGAACAACTTGGAAGCGTGAGCAGAGATAT +
Preference number: 1 (lower is better)
Translates to: TQDLPCLGDEWQTQL*LMSLRTTWKREQRY
Trigger: ATATCTCTGCTCACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGTAAATCTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR TCA 90 bp ATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGTAACTaGAAAATGAGCGCTATCCTCCCAGACTGTTTTCTTCTATCAAGT +
Preference number: 1 (lower is better)
Translates to: ILLLSQRQRDSLKGN*KMSAILPDCFLLSS
Trigger: ACTTGATAGAAGAAAACAGTCTGGGAGGATAGCGCTCATTTTTCAGTTACCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 90 bp AGTTTCTCTGAGTGGCTAGCTTCAATTTCCAACTTAGAGGTTTCATaGGCAGCATTTAAGTTGTCAAACTGCTCTTGCAATTGCATTTTG +
Preference number: 1 (lower is better)
Translates to: SFSEWLASISNLEVS*AAFKLSNCSCNCIL
Trigger: CAAAATGCAATTGCAAGAGCAGTTTGACAACTTAAATGCTGCGCATGAAACCTCTAAGTTGGAAATTGAAGCTAGCCACTCAGAGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CCA 90 bp ACAGCATCCTTTCAACTTCATACTCACTACTCACAAACCAACCCTTaGAAGTACAACGGATTTACTGTTTATCAAGAGGGGAAACTTTCA +
Preference number: 1 (lower is better)
Translates to: TASFQLHTHYSQTNP*KYNGFTVYQEGKLS
Trigger: TGAAAGTTTCCCCTCTTGATAAACAGTAAATCCGTTGTACTTCCAAGGGTTGGTTTGTGAGTAGTGAGTATGAAGTTGAAAGGATGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519066.5
3UTR TCA 90 bp CCCAGACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTaGATCCTACCTTTCTTAATTATACTAGCCAATGACTTCCTTGTT +
Preference number: 1 (lower is better)
Translates to: PRLFSSIKYCIIGKH*ILPFLIILANDFLV
Trigger: AACAAGGAAGTCATTGGCTAGTATAATTAAGAAAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR TCA 90 bp TTGTTGTCCACCAGTTTCTCCATTTTCATTAACTTGATGTCCTGTTaGTGCAGTTTCTCATTCTTGATCTCTAACACAGCTTTCAGGCTT +
Preference number: 1 (lower is better)
Translates to: LLSTSFSIFINLMSC*CSFSFLISNTAFRL
Trigger: AAGCCTGAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGCATCAACAGGACATCAAGTTAATGAAAATGGAGAAACTGGTGGACAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR GCA 90 bp GGGAAGGAGCCCGAATTCCTTGGTGACTGCAAAGGGATGGCGGAGGATGTGGGGTGGCTATTGAGGGGGTaGTTCCTGTCCTCCGCAGCG +
Preference number: 2 (lower is better)
Translates to: GKEPEFLGDCKGMAEDVGWLLRG*FLSSAA
Trigger: CGCTGCGGAGGACAGGAAGCACCCCCTCAATAGCCA...CCCCACATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR GCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGCTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTLIYLL*PRSSLG
Trigger: CCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAG...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR CAA 90 bp CGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTGGGGTCAGTCCTGCAGACCTGCATC +
Preference number: 2 (lower is better)
Translates to: RSSYPTVITRVLIYL*CPRSSLGSVLQTCI
Trigger: GATGCAGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDLIYLL*PRSSLG
Trigger: CCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAG...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTTCAGCTCACTGTGGGTaGTGGCTATTGAGGGGGTGC +
Preference number: 2 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGSAHCG*WLLRGC
Trigger: GCACCCCCTCAATAGCCAGCACCCACAGTGAGCTGA...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR GCA 90 bp GGGAAGGAGCCCGAATTCCTTGGTGACTGCAAAGGGATGGCGGAGGATGTGGGGTTTTCAGCCTGGTGCTaGTGGACGAATGCTTCATAC +
Preference number: 2 (lower is better)
Translates to: GKEPEFLGDCKGMAEDVGFSAWC*WTNASY
Trigger: GTATGAAGCATTCGTCCAGCAGCACCAGGCTGAAAA...CCCCACATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CAA 90 bp CAGAATTGTTGCTGTAAGTGCTCAGCTCACTGTGGGTGCTGGCTATaGAGGGGGTGCTTCCTGTCCTCCGCAGCGCAGGACTTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: QNCCCKCSAHCGCWL*RGCFLSSAAQDFSK
Trigger: CTTTGAAAAGTCCTGCGCTGCGGAGGACAGGAAGCACCCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCACTTACAGCAACAATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR TCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACG +
Preference number: 2 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKRFRRW*RSSYPT
Trigger: CGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCG...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPLIYLL*PRSSLG
Trigger: CCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAG...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCGCCCACGTTCCTCCTTaGGGTCAGTCCTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: CNLEESWTSHIFHSWERSAHVPP*GQSCRP
Trigger: AGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGC...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAGCCCACGTTCCTCCTTaGGGTCAGTCCTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRAHVPP*GQSCRP
Trigger: AGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGC...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACG +
Preference number: 2 (lower is better)
Translates to: KEADHSATFPKTKGLLKGRFRRW*RSSYPT
Trigger: CGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCG...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATTCAGTCCTGCAGACCTaGATCAAAATGCTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDSVLQT*IKMLSE
Trigger: CTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGA...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCGCCCACGTTCCTCCTTaGGGTCAGTCCTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFAHVPP*GQSCRP
Trigger: AGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGC...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTTCCTTAAAGGGTAACTaGAAAATGAGCGCTATCCTC +
Preference number: 2 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDASLKGN*KMSAIL
Trigger: GAGGATAGCGCTCATTTTTCAGTTACCCTTTAAGGA...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCGCCCGAATTCCTTGGTaGCTGCAAAGGGATGGCGGA +
Preference number: 2 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFARIPW*LQRDGG
Trigger: TCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGC...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR GCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATAGACCTGCATCAAAATaGTTTCAGAGAGTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDRPASK*FQRVCG
Trigger: TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCT...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAATCCAGTCTCAGAAGCTaGGATTCCGCCGGTGGTGAC +
Preference number: 2 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKSSLRS*DSAGGD
Trigger: GTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGA...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCTCCAGTCTCAGAAGCTaGGATTCCGCCGGTGGTGAC +
Preference number: 2 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFSSLRS*DSAGGD
Trigger: GTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGA...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTAGAAGCGGACCATTCTaGTACTTTCCCAAAGACAAA +
Preference number: 2 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDARSGPF*YFPKDK
Trigger: TTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCT...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGGCCCACGTTCCTCCTTaGGGTCAGTCCTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: KEADHSATFPKTKGLLKGAHVPP*GQSCRP
Trigger: AGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGC...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp GGGAAGGAGCCCGAATTCCTTGGTGACTGCAAAGGGATGGCGGAGGATGTGGGGTCAAGTTTCTCTGAGTaGCTAGCTTCAATTTCCAAC +
Preference number: 2 (lower is better)
Translates to: GKEPEFLGDCKGMAEDVGSSFSE*LASISN
Trigger: GTTGGAAATTGAAGCTAGCCACTCAGAGAAACTTGA...CCCCACATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CAA 90 bp GTGATCACACGTGTGCTGATATACCTCTTGTGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGT +
Preference number: 2 (lower is better)
Translates to: VITRVLIYLLCPRSS*GSVLQTCIKMLSES
Trigger: ACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAGCACACGTGTGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR CAA 90 bp GGGGTGCTTCCTGTCCTCCGCAGCGCAGGACTTTTCAAAGATGCTTaGGATTTAGGAAGTGGTCTAGGCAAATTCACCCATGACGACTGT +
Preference number: 2 (lower is better)
Translates to: GVLPVLRSAGLFKDA*DLGSGLGKFTHDDC
Trigger: ACAGTCGTCATGGGTGAATTTGCCTAGACCACTTCCTAAATCCAAAGCATCTTTGAAAAGTCCTGCGCTGCGGAGGACAGGAAGCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CAA 90 bp TGCAGTTTCCACAGAAGCTCCTCGTTTTCCATAGAGAGTCGCTTGTaGACTTTCGACTCCTTCTCCAGCGACTCTTGCAGAACAGCCTGC +
Preference number: 2 (lower is better)
Translates to: CSFHRSSSFSIESRL*TFDSFSSDSCRTAC
Trigger: GCAGGCTGTTCTGCAAGAGTCGCTGGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGAAAACGAGGAGCTTCTGTGGAAACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR TCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCACTGACATCACAATGTTaGCACATGCAGGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPLTSQC*HMQGGG
Trigger: TCCCCCTCCCTGCATGTGTCAACATTGTGATGTCAG...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGCTGACATCACAATGTTaGCACATGCAGGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWLTSQC*HMQGGG
Trigger: TCCCCCTCCCTGCATGTGTCAACATTGTGATGTCAG...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTGCAGTTTCTCATTCTTaGTCTCTAACACAGCTTTCA +
Preference number: 2 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAAVSHS*SLTQLS
Trigger: TGAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGC...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR GCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAATCCAGTCTCAGAAGCTaGGATTCCGCCGGTGGTGAC +
Preference number: 2 (lower is better)
Translates to: AGSGALENHIPLSLSQRKSSLRS*DSAGGD
Trigger: GTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGA...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAGTGCTCAGCTCACTGTaGGTGCTGGCTATTGAGGGG +
Preference number: 2 (lower is better)
Translates to: AGSGALENHIPLSLSQRKVLSSL*VLAIEG
Trigger: CCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCAC...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CAA 90 bp TTGTGCAGTTTCCACAGAAGCTCCTCGTTTTCCATAGAGAGTCGCTaGTTGACTTTCGACTCCTTCTCCAGCGACTCTTGCAGAACAGCC +
Preference number: 2 (lower is better)
Translates to: LCSFHRSSSFSIESR*LTFDSFSSDSCRTA
Trigger: GGCTGTTCTGCAAGAGTCGCTGGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGAAAACGAGGAGCTTCTGTGGAAACTGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR TCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACG +
Preference number: 2 (lower is better)
Translates to: DCFLLSSTASSVSTESYLRFRRW*RSSYPT
Trigger: CGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCG...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTAATTATACTAGCCAATaGCTTCCTTGTTCTCGTTCT +
Preference number: 2 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDANYTSQ*LPCSRS
Trigger: AGAACGAGAACAAGGAAGTCATTGGCTAGTATAATT...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTAGGCAAATTCACCCATaGCGACTGTGCAGTTTTCAA +
Preference number: 2 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGRQIHP*RLCSFQ
Trigger: TTGAAAACTGCACAGTCGTCATGGGTGAATTTGCCT...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTCTCTCGTTCTTTAAGTaGTTTGTGCAACAACGTCCG +
Preference number: 2 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGLSFFK*FVQQRP
Trigger: CGGACGTTGTTGCACAAAGCACTTAAAGAACGAGAG...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACACAGCAGAGGAGGCTaGATCAGACACATGACACTC +
Preference number: 2 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKHSRGG*IRHMTL
Trigger: GAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACCTGACATCACAATGTTaGCACATGCAGGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHLTSQC*HMQGGG
Trigger: TCCCCCTCCCTGCATGTGTCAACATTGTGATGTCAG...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCCACAATGTTGACACATaGAGGGAGGGGGAGATAAAG +
Preference number: 2 (lower is better)
Translates to: CNLEESWTSHIFHSWERSHNVDT*REGEIK
Trigger: CTTTATCTCCCCCTCCCTGCATGTGTCAACATTGTG...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACCTGGAGGAGAGTTaGACAAGCCACATTTTCCAC +
Preference number: 2 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPNLEES*TSHIFH
Trigger: GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTT...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCTGCCTAGGGGATGAATaGCAAACCCAACTTTGGCTA +
Preference number: 2 (lower is better)
Translates to: CNLEESWTSHIFHSWERSCLGDE*QTQLWL
Trigger: TAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCA...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCACTTTCAGAGAGTCTGTaGACTTTGGGGAGGTGTCAT +
Preference number: 2 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPLSESL*TLGRCH
Trigger: ATGACACCTCCCCAAAGTCCACAGACTCTCTGAAAG...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR TCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCATCTTAATAGGGCCCTaGGAGTTTTTCCCCCTATGC +
Preference number: 2 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFILIGP*EFFPLC
Trigger: GCATAGGGGGAAAAACTCTCAGGGCCCTATTAAGAT...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp CCACAGAAGCTCCTCGTTTTCCATAGAGAGTCGCTTGTTGACTTTCGACTCCTTGCTGCATCAGACACATaGCACTCTGTGACATCCATT +
Preference number: 2 (lower is better)
Translates to: PQKLLVFHRESLVDFRLLAASDT*HSVTSI
Trigger: AATGGATGTCACAGAGTGTCATGTGTCTGATGCAGC...AAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGAAAACGAGGAGCTTCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR TCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTAGGGTAACTGAAAAATaGGCGCTATCCTCCCAGACT +
Preference number: 2 (lower is better)
Translates to: HLEDELALGLWKIIFLYPRVTEK*ALSSQT
Trigger: AGTCTGGGAGGATAGCGCTCATTTTTCAGTTACCCT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTACCATGCCTAGGGGATaGATGGCAAACCCAACTTTG +
Preference number: 2 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILTMPRG*MANPTL
Trigger: CAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGT...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTAACCTGGAGGAGAGTTaGACAAGCCACATTTTCCAC +
Preference number: 2 (lower is better)
Translates to: HLEDELALGLWKIIFLYPNLEES*TSHIFH
Trigger: GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGCCTAGGGGATGAATaGCAAACCCAACTTTGGCTA +
Preference number: 2 (lower is better)
Translates to: HLEDELALGLWKIIFLYPCLGDE*QTQLWL
Trigger: TAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp GGTTTTGTGTTGTTTCAGTGCTTCCTCCCGCTCAGACAGCAGGTGCTGAATCACTCTCGAAGGACCTTTTaGAGGAGTTTTCATCAAGTG +
Preference number: 2 (lower is better)
Translates to: GFVLFQCFLPLRQQVLNHSRRTF*RSFHQV
Trigger: CACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGA...GTGATTCAGCACCTGCTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CAA 90 bp CCATGCCTAGGGGATGAATGGCAAACCCAACTTTGGCTAATGTCATaGAGAACAACTTGGAAGCGTGAGCAGAGATATCTCATGAAGTGG +
Preference number: 2 (lower is better)
Translates to: PCLGDEWQTQLWLMS*RTTWKREQRYLMKW
Trigger: CCACTTCATGAGATATCTCTGCTCACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACG +
Preference number: 2 (lower is better)
Translates to: LKTHKKVSVVKNITKVINRFRRW*RSSYPT
Trigger: CGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCG...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAGCTGCATCAGACACATaGCACTCTGTGACATCCATT +
Preference number: 2 (lower is better)
Translates to: AGSGALENHIPLSLSQRKAASDT*HSVTSI
Trigger: AATGGATGTCACAGAGTGTCATGTGTCTGATGCAGC...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACGCTGCATCAGACACATaGCACTCTGTGACATCCATT +
Preference number: 2 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHAASDT*HSVTSI
Trigger: AATGGATGTCACAGAGTGTCATGTGTCTGATGCAGC...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAATCACCTCTAGCATCCTaGATCTCTTCTTACTACAGC +
Preference number: 2 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKSPLAS*ISSYYS
Trigger: GCTGTAGTAAGAAGAGATTCAGGATGCTAGAGGTGA...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACAACTTGGAAGCGTaGGCAGAGATATCTCATGAA +
Preference number: 2 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPNNLEA*AEISHE
Trigger: TTCATGAGATATCTCTGCTCACGCTTCCAAGTTGTT...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCCCATCACTACAAACTaGGCACAACTACAGTTGTCT +
Preference number: 2 (lower is better)
Translates to: HLEDELALGLWKIIFLYPPITTN*AQLQLS
Trigger: AGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACCCATCACTACAAACTaGGCACAACTACAGTTGTCT +
Preference number: 2 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKPITTN*AQLQLS
Trigger: AGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp CTCTGCTTCTTCAATGTAAGTGTCCCGAAGCTTTTCATACTCCCTGGTGTAAAACTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: LCFFNVSVPKLFILPGVKLIYLL*PRSSLG
Trigger: CCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAG...TTTTACACCAGGGAGTATGAAAAGCTTCGGGACACTTACATTGAAGAAGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACATCCAGTCTCAGAAGCTaGGATTCCGCCGGTGGTGAC +
Preference number: 2 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTSSLRS*DSAGGD
Trigger: GTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGA...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCACAATGTTGACACATaGAGGGAGGGGGAGATAAAG +
Preference number: 2 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILHNVDT*REGEIK
Trigger: CTTTATCTCCCCCTCCCTGCATGTGTCAACATTGTG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTAAGATGAGCTGGCTCTaGGGCTCTGGAAAATCATAT +
Preference number: 2 (lower is better)
Translates to: HLEDELALGLWKIIFLYPKMSWL*GSGKSY
Trigger: ATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCCACATTTTCCACTCATaGGAAAGAAGCGGACCATTC +
Preference number: 2 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFHIFHS*ERSGPF
Trigger: GAATGGTCCGCTTCTTTCCCATGAGTGGAAAATGTG...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACACATTTTCCACTCATaGGAAAGAAGCGGACCATTC +
Preference number: 2 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKHIFHS*ERSGPF
Trigger: GAATGGTCCGCTTCTTTCCCATGAGTGGAAAATGTG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTTCACCTCTAGCATCCTaGATCTCTTCTTACTACAGC +
Preference number: 2 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILSPLAS*ISSYYS
Trigger: GCTGTAGTAAGAAGAGATTCAGGATGCTAGAGGTGA...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGCTCATGAAGTGGCAGTaGACCTACATTTCCATTTAT +
Preference number: 2 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWLMKWQ*TYISIY
Trigger: ATAAATGGAAATGTAGGTTCACTGCCACTTCATGAG...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCACTCATGAAGTGGCAGTaGACCTACATTTCCATTTAT +
Preference number: 2 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPLMKWQ*TYISIY
Trigger: ATAAATGGAAATGTAGGTTCACTGCCACTTCATGAG...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAAACAACTTGGAAGCGTaGGCAGAGATATCTCATGAA +
Preference number: 2 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKNNLEA*AEISHE
Trigger: TTCATGAGATATCTCTGCTCACGCTTCCAAGTTGTT...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGAGACCTGCATCAAAATaGTTTCAGAGAGTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKRPASK*FQRVCG
Trigger: TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCT...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCTTTAAGTGCTTTGTaGAACAACGTCCGTGTCGAT +
Preference number: 2 (lower is better)
Translates to: HLEDELALGLWKIIFLYPSLSAL*NNVRVD
Trigger: ATCGACACGGACGTTGTTGCACAAAGCACTTAAAGA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCTCTCGTTCTTTAAGTaGTTTGTGCAACAACGTCCG +
Preference number: 2 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILLSFFK*FVQQRP
Trigger: CGGACGTTGTTGCACAAAGCACTTAAAGAACGAGAG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAACTCTCGTTCTTTAAGTaGTTTGTGCAACAACGTCCG +
Preference number: 2 (lower is better)
Translates to: AGSGALENHIPLSLSQRKLSFFK*FVQQRP
Trigger: CGGACGTTGTTGCACAAAGCACTTAAAGAACGAGAG...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCGCTATGAGATTTATTTaGCGGTCACGTAATACGGAG +
Preference number: 2 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFAMRFI*RSRNTE
Trigger: CTCCGTATTACGTGACCGGCAAATAAATCTCATAGC...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATGCCCACGTTCCTCCTTaGGGTCAGTCCTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: LKTHKKVSVVKNITKVINAHVPP*GQSCRP
Trigger: AGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGC...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAGAAGGTTTGCTTTTGTaGCTCTGGATGGTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: AGSGALENHIPLSLSQRKEGLLL*LWMVEK
Trigger: TTTCTCCACCATCCAGAGCCACAAAAGCAAACCTTC...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCTGGCTCTGGGGCTCTaGAAAATCATATTCCTTTAT +
Preference number: 2 (lower is better)
Translates to: HLEDELALGLWKIIFLYPLALGL*KIIFLY
Trigger: ATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACAAGATGAGCTGGCTCTaGGGCTCTGGAAAATCATAT +
Preference number: 2 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHKMSWL*GSGKSY
Trigger: ATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTT...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp CCACAGAAGCTCCTCGTTTTCCATAGAGAGTCGCTTGTTGACTTTCGACTCCTTAGAAGGTGTCTGTGGTaGAGAACATTACAAAGGTTA +
Preference number: 2 (lower is better)
Translates to: PQKLLVFHRESLVDFRLLRRCLW*RTLQRL
Trigger: TAACCTTTGTAATGTTCTTCACCACAGACACCTTCT...AAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGAAAACGAGGAGCTTCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR TCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACACTGACATCACAATGTTaGCACATGCAGGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTLTSQC*HMQGGG
Trigger: TCCCCCTCCCTGCATGTGTCAACATTGTGATGTCAG...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACAGACCTGCATCAAAATaGTTTCAGAGAGTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHRPASK*FQRVCG
Trigger: TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCT...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACACTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGG +
Preference number: 2 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTLIYLL*PRSSLG
Trigger: CCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAG...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTTCTTTAAGTGCTTTGTaGAACAACGTCCGTGTCGAT +
Preference number: 2 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILSLSAL*NNVRVD
Trigger: ATCGACACGGACGTTGTTGCACAAAGCACTTAAAGA...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACAGAAGCGGACCATTCTaGTACTTTCCCAAAGACAAA +
Preference number: 2 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHRSGPF*YFPKDK
Trigger: TTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCT...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGCTATGAGATTTATTTaGCGGTCACGTAATACGGAG +
Preference number: 2 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILAMRFI*RSRNTE
Trigger: CTCCGTATTACGTGACCGGCAAATAAATCTCATAGC...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAACATTACCAGAATTGTTaGTGTAAGTGCTCAGCTCAC +
Preference number: 2 (lower is better)
Translates to: AGSGALENHIPLSLSQRKHYQNC*CKCSAH
Trigger: GTGAGCTGAGCACTTACAGCAACAATTCTGGTAATG...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACCTGGCTCTGGGGCTCTaGAAAATCATATTCCTTTAT +
Preference number: 2 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHLALGL*KIIFLY
Trigger: ATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAG...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCTCATTGAGAACAACTTaGAAGCGTGAGCAGAGATAT +
Preference number: 2 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFSLRTT*KREQRY
Trigger: ATATCTCTGCTCACGCTTCCAAGTTGTTCTCAATGA...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTGCTCACTGTGGGTGCTaGCTATTGAGGGGGTGCTTC +
Preference number: 2 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFAHCGC*LLRGCF
Trigger: GAAGCACCCCCTCAATAGCCAGCACCCACAGTGAGC...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGAGTGAACATGAGCCCTaGATACCAAAGGCTTCAAAT +
Preference number: 2 (lower is better)
Translates to: KEADHSATFPKTKGLLKGSEHEP*IPKASN
Trigger: ATTTGAAGCCTTTGGTATCCAGGGCTCATGTTCACT...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR TCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGAGAAGGTGTCTGTGGTaGAGAACATTACAAAGGTTA +
Preference number: 2 (lower is better)
Translates to: KEADHSATFPKTKGLLKGRRCLW*RTLQRL
Trigger: TAACCTTTGTAATGTTCTTCACCACAGACACCTTCT...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTAATTATACTAGCCAATaGCTTCCTTGTTCTCGTTCT +
Preference number: 2 (lower is better)
Translates to: HLEDELALGLWKIIFLYPNYTSQ*LPCSRS
Trigger: AGAACGAGAACAAGGAAGTCATTGGCTAGTATAATT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAAATTATACTAGCCAATaGCTTCCTTGTTCTCGTTCT +
Preference number: 2 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKNYTSQ*LPCSRS
Trigger: AGAACGAGAACAAGGAAGTCATTGGCTAGTATAATT...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTATCATCGGTAAGCACTaGATCCTACCTTTCTTAATT +
Preference number: 2 (lower is better)
Translates to: HLEDELALGLWKIIFLYPIIGKH*ILPFLI
Trigger: AATTAAGAAAGGTAGGATTCAGTGCTTACCGATGAT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACCTCATGAAGTGGCAGTaGACCTACATTTCCATTTAT +
Preference number: 2 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHLMKWQ*TYISIY
Trigger: ATAAATGGAAATGTAGGTTCACTGCCACTTCATGAG...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACCATGCCTAGGGGATaGATGGCAAACCCAACTTTG +
Preference number: 2 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYTMPRG*MANPTL
Trigger: CAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGT...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCATATCAGAAGCAAACATaGAAGGTTACATACATGATG +
Preference number: 2 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPYQKQT*KVTYMM
Trigger: CATCATGTATGTAACCTTCCATGTTTGCTTCTGATA...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CAA 90 bp ATCCGAGCTTTCAATTCTTCATTCTCCTGCTGGAAACGCTTCAATTaGTCAACCAATGCTGTGTTGTTGTCCACCAGTTTCTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: IRAFNSSFSCWKRFN*STNAVLLSTSFSIF
Trigger: GAAAATGGAGAAACTGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATTGAAAGCTCGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR TCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATCTGACATCACAATGTTaGCACATGCAGGGAGGGGGA +
Preference number: 2 (lower is better)
Translates to: LKTHKKVSVVKNITKVINLTSQC*HMQGGG
Trigger: TCCCCCTCCCTGCATGTGTCAACATTGTGATGTCAG...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACACACAATGTTGACACATaGAGGGAGGGGGAGATAAAG +
Preference number: 2 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTHNVDT*REGEIK
Trigger: CTTTATCTCCCCCTCCCTGCATGTGTCAACATTGTG...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CAA 90 bp GACAGCATCCTTTCAACTTCATACTCACTACTCACAAACCAACCCTaGGAAGTACAACGGATTTACTGTTTATCAAGAGGGGAAACTTTC +
Preference number: 2 (lower is better)
Translates to: DSILSTSYSLLTNQP*EVQRIYCLSRGETF
Trigger: GAAAGTTTCCCCTCTTGATAAACAGTAAATCCGTTGTACTTCCAAGGGTTGGTTTGTGAGTAGTGAGTATGAAGTTGAAAGGATGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519066.5
3UTR-3UTR TCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGCTGCATCAGACACATaGCACTCTGTGACATCCATT +
Preference number: 2 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVAASDT*HSVTSI
Trigger: AATGGATGTCACAGAGTGTCATGTGTCTGATGCAGC...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGAACAACTTGGAAGCGTaGGCAGAGATATCTCATGAA +
Preference number: 2 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKNNLEA*AEISHE
Trigger: TTCATGAGATATCTCTGCTCACGCTTCCAAGTTGTT...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGTCTTTAAGTGCTTTGTaGAACAACGTCCGTGTCGAT +
Preference number: 2 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKSLSAL*NNVRVD
Trigger: ATCGACACGGACGTTGTTGCACAAAGCACTTAAAGA...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp GGAAACGCTTCAATTTGTCAACCAATGCTGTGTTGTTGTCCACCAGTTTCTCCAAACTTAGAGGTTTCATaGGCAGCATTTAAGTTGTCA +
Preference number: 2 (lower is better)
Translates to: GNASICQPMLCCCPPVSPNLEVS*AAFKLS
Trigger: TGACAACTTAAATGCTGCGCATGAAACCTCTAAGTT...TGGAGAAACTGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR GCA 90 bp GGAAACGCTTCAATTTGTCAACCAATGCTGTGTTGTTGTCCACCAGTTTCTCCATTCTCTAGCGATTCCTaGTTCTCAGAAAGTAAATCT +
Preference number: 2 (lower is better)
Translates to: GNASICQPMLCCCPPVSPFSSDS*FSESKS
Trigger: AGATTTACTTTCTGAGAAGCAGGAATCGCTAGAGAA...TGGAGAAACTGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR GCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTCTTGAGATTGCCATGTaGTTGTCCATCCGAGCTTTC +
Preference number: 2 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVLEIAM*LSIRAF
Trigger: GAAAGCTCGGATGGACAAGCACATGGCAATCTCAAG...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACACACATTTTCCACTCATaGGAAAGAAGCGGACCATTC +
Preference number: 2 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTHIFHS*ERSGPF
Trigger: GAATGGTCCGCTTCTTTCCCATGAGTGGAAAATGTG...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTATCAGAAGCAAACATaGAAGGTTACATACATGATG +
Preference number: 2 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHYQKQT*KVTYMM
Trigger: CATCATGTATGTAACCTTCCATGTTTGCTTCTGATA...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACATCCTTAAAGGGTAACTaGAAAATGAGCGCTATCCTC +
Preference number: 2 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTSLKGN*KMSAIL
Trigger: GAGGATAGCGCTCATTTTTCAGTTACCCTTTAAGGA...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTCACAATGTTGACACATaGAGGGAGGGGGAGATAAAG +
Preference number: 2 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFHNVDT*REGEIK
Trigger: CTTTATCTCCCCCTCCCTGCATGTGTCAACATTGTG...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTAAGATGAGCTGGCTCTaGGGCTCTGGAAAATCATAT +
Preference number: 2 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVKMSWL*GSGKSY
Trigger: ATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTT...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACAGAAGGTGTCTGTGGTaGAGAACATTACAAAGGTTA +
Preference number: 2 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYRRCLW*RTLQRL
Trigger: TAACCTTTGTAATGTTCTTCACCACAGACACCTTCT...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATGAAGGTTTGCTTTTGTaGCTCTGGATGGTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: LKTHKKVSVVKNITKVINEGLLL*LWMVEK
Trigger: TTTCTCCACCATCCAGAGCCACAAAAGCAAACCTTC...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTGAAGGTTTGCTTTTGTaGCTCTGGATGGTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFEGLLL*LWMVEK
Trigger: TTTCTCCACCATCCAGAGCCACAAAAGCAAACCTTC...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTCAAATAAAAGGATCCTaGGGAACCATTCTGAAATGC +
Preference number: 2 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVQIKGS*GTILKC
Trigger: GCATTTCAGAATGGTTCCTCAGGATCCTTTTATTTG...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR GCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTAGACCTGCATCAAAATaGTTTCAGAGAGTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFRPASK*FQRVCG
Trigger: TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCT...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTTTCAGATCATTGATTTaGTTCTCTAGCGATTCCTGC +
Preference number: 2 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVFRSLI*FSSDSC
Trigger: GCAGGAATCGCTAGAGAAGCAAATCAATGATCTGAA...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR TCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATAGAAGGTGTCTGTGGTaGAGAACATTACAAAGGTTA +
Preference number: 2 (lower is better)
Translates to: LKTHKKVSVVKNITKVINRRCLW*RTLQRL
Trigger: TAACCTTTGTAATGTTCTTCACCACAGACACCTTCT...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTAGAAGGTGTCTGTGGTaGAGAACATTACAAAGGTTA +
Preference number: 2 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFRRCLW*RTLQRL
Trigger: TAACCTTTGTAATGTTCTTCACCACAGACACCTTCT...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTAATTATACTAGCCAATaGCTTCCTTGTTCTCGTTCT +
Preference number: 2 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVNYTSQ*LPCSRS
Trigger: AGAACGAGAACAAGGAAGTCATTGGCTAGTATAATT...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR TCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTCTCATGAAGTGGCAGTaGACCTACATTTCCATTTAT +
Preference number: 2 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFLMKWQ*TYISIY
Trigger: ATAAATGGAAATGTAGGTTCACTGCCACTTCATGAG...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR GCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACCATTTTGTACTTCTCTaGTTCTTCAATGTAAGTGTC +
Preference number: 2 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYHFVLL*FFNVSV
Trigger: GACACTTACATTGAAGAAGCAGAGAAGTACAAAATG...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR GCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTAATTCTTCATTCTCCTaGTGGAAACGCTTCAATTTG +
Preference number: 2 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVNSSFS*WKRFNL
Trigger: CAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATT...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR TCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTATCATCGGTAAGCACTaGATCCTACCTTTCTTAATT +
Preference number: 2 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFIIGKH*ILPFLI
Trigger: AATTAAGAAAGGTAGGATTCAGTGCTTACCGATGAT...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATCTGAAATGCTGGTTTTaGAGGTTTCTCCTCATATTT +
Preference number: 2 (lower is better)
Translates to: LKTHKKVSVVKNITKVINLKCWF*RFLLIF
Trigger: AAATATGAGGAGAAACCTCCAAAACCAGCATTTCAG...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATTATCAGAAGCAAACATaGAAGGTTACATACATGATG +
Preference number: 2 (lower is better)
Translates to: LKTHKKVSVVKNITKVINYQKQT*KVTYMM
Trigger: CATCATGTATGTAACCTTCCATGTTTGCTTCTGATA...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACTGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACC +
Preference number: 3 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHCPRSS*GSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATTGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACC +
Preference number: 3 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDCPRSS*GSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GGGAAGGAGCCCGAATTCCTTGGTGACTGCAAAGGGATGGCGGAGGATGTGGGGTGTGGGTGCTGGCTATaGAGGGGGTGCTTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: GKEPEFLGDCKGMAEDVGCGCWL*RGCFLS
Trigger: GGACAGGAAGCACCCCCTCAATAGCCAGCACCCACA...CCCCACATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTTGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACC +
Preference number: 3 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGCPRSS*GSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR TCA 72 bp GAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACGGTGATCACACGTGTG +
Preference number: 3 (lower is better)
Translates to: EFQSQKLRFRRW*RSSYPTVITRV
Trigger: CACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 72 bp TGCTCAGCTCACTGTGGGTGCTGGCTATTGAGGGGGTaGTTCCTGTCCTCCGCAGCGCAGGACTTTTCAAAG +
Preference number: 3 (lower is better)
Translates to: CSAHCGCWLLRG*FLSSAAQDFSK
Trigger: CTTTGAAAAGTCCTGCGCTGCGGAGGACAGGAAGCACCCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CCA 72 bp GGAAGGAGCCCGAATTCCTTGGTGACTGCAAAGGGATaGCGGAGGATGTGGGGGATCTCTTGGGGCTACACA +
Preference number: 3 (lower is better)
Translates to: GRSPNSLVTAKG*RRMWGISWGYT
Trigger: TGTGTAGCCCCAAGAGATCCCCCACATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 72 bp CCTACGGTGATCACACGTGTGCTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGGTCAGTCCTGCAGACC +
Preference number: 3 (lower is better)
Translates to: PTVITRVLIYLL*PRSSLGSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAGCACACGTGTGATCACCGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGATGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACC +
Preference number: 3 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRCPRSS*GSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 72 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTaGGATTCCGCCGGTGGTGACGCTCCAGTTACCCTA +
Preference number: 3 (lower is better)
Translates to: AKVFLQSSSLRS*DSAGGDAPVTL
Trigger: TAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 72 bp CGCTTGTTGACTTTCGACTCCTTCTCCAGCGACTCTTaGAGAACAGCCTGCTCCGTGGAAAGCTGCCTTGAG +
Preference number: 3 (lower is better)
Translates to: RLLTFDSFSSDS*RTACSVESCLE
Trigger: CTCAAGGCAGCTTTCCACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAAGGAGTCGAAAGTCAACAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGTGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACC +
Preference number: 3 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKCPRSS*GSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 72 bp TGCCCACGTTCCTCCTTGGGGTCAGTCCTGCAGACCTaGATCAAAATGCTTTCAGAGAGTCTGTGGACTTTG +
Preference number: 3 (lower is better)
Translates to: CPRSSLGSVLQT*IKMLSESLWTL
Trigger: CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTAGGTGGAAAAACCCATaGGTACTTCCCTTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDARWKNP*VLPFFF
Trigger: AAAGAAAAAGGGAAGTACCAATGGGTTTTTCCACCT...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAAGGAGCCCGAATTCCTaGGTGACTGCAAAGGGATGG +
Preference number: 3 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKRSPNS*VTAKGW
Trigger: CCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCT...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCCTACACAGGTCCCCATaGTGCAGTTTCCACAGAAGC +
Preference number: 3 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFLHRSP*CSFHRS
Trigger: GCTTCTGTGGAAACTGCACAATGGGGACCTGTGTAG...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR GCA 72 bp CCGCTCAGACAGCAGGTGCTGAATCACAACTGTCAATaGCTCAAACTTGGTATTACCACAGGCAAGAAGCTG +
Preference number: 3 (lower is better)
Translates to: PLRQQVLNHNCQ*LKLGITTGKKL
Trigger: CAGCTTCTTGCCTGTGGTAATACCAAGTTTGAGGCATTGACAGTTGTGATTCAGCACCTGCTGTCTGAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CCA 72 bp CTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTaGACTTTGGGGAGGTGTCATCTGGGTGAAATGCTG +
Preference number: 3 (lower is better)
Translates to: LQTCIKMLSESL*TLGRCHLGEML
Trigger: CAGCATTTCACCCAGATGACACCTCCCCAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCCAACCTGGAGGAGAGTaGGACAAGCCACATTTTCCA +
Preference number: 3 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFQPGGE*DKPHFP
Trigger: TGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTG...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCAACCTGGAGGAGAGTaGGACAAGCCACATTTTCCA +
Preference number: 3 (lower is better)
Translates to: HLEDELALGLWKIIFLYPQPGGE*DKPHFP
Trigger: TGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGCTTTTCAAAGATGCTTaGGATTTAGGAAGTGGTCTA +
Preference number: 3 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPLFKDA*DLGSGL
Trigger: TAGACCACTTCCTAAATCCAAAGCATCTTTGAAAAG...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAGAGATTGCCATGTGCTaGTCCATCCGAGCTTTCAAT +
Preference number: 3 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPEIAMC*SIRAFN
Trigger: ATTGAAAGCTCGGATGGACAAGCACATGGCAATCTC...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR GCA 72 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATaGCTAGGGGATGAATGGCAAACCCAACTTTGGCTA +
Preference number: 3 (lower is better)
Translates to: YGGQQGTTQDLP*LGDEWQTQLWL
Trigger: TAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CCA 72 bp CTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATaGGAAAGAAGCGGACCATTCTGCTACTTTCCCAAA +
Preference number: 3 (lower is better)
Translates to: LEESWTSHIFHS*ERSGPFCYFPK
Trigger: TTTGGGAAAGTAGCAGAATGGTCCGCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCGTTCTTTAAGTGCTTaGTGCAACAACGTCCGTGTC +
Preference number: 3 (lower is better)
Translates to: HLEDELALGLWKIIFLYPRSLSA*CNNVRV
Trigger: GACACGGACGTTGTTGCACAAAGCACTTAAAGAACG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCCGTTCTTTAAGTGCTTaGTGCAACAACGTCCGTGTC +
Preference number: 3 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFRSLSA*CNNVRV
Trigger: GACACGGACGTTGTTGCACAAAGCACTTAAAGAACG...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCAACCTGGAGGAGAGTaGGACAAGCCACATTTTCCA +
Preference number: 3 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILQPGGE*DKPHFP
Trigger: TGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCATAGAGAGTCGCTTGTaGACTTTCGACTCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFIESRL*TFDSFS
Trigger: GGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTAT...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCGGTTTCTCCTCATATTaGATGACAGCGGCATTACCA +
Preference number: 3 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFGFSSY*MTAALP
Trigger: TGGTAATGCCGCTGTCATCAAATATGAGGAGAAACC...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGGCTTCGAGGATTCTTTaGCCTGCTCTTTTCAACTGC +
Preference number: 3 (lower is better)
Translates to: KEADHSATFPKTKGLLKGASRIL*PALFNC
Trigger: GCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAGC...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCACCAATGCTGTGTTGTaGTCCACCAGTTTCTCCATT +
Preference number: 3 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFTNAVL*STSFSI
Trigger: AATGGAGAAACTGGTGGACAACAACACAGCATTGGT...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACCTTCTCCAGCGACTCTaGCAGAACAGCCTGCTCCGT +
Preference number: 3 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYLLQRL*QNSLLR
Trigger: ACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAAG...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR TCA 72 bp TGTTTCAGTGCTTCCTCCCGCTCAGACAGCAGGTGCTaGATCACAACTGTCAATGCCTCAAACTTGGTATTA +
Preference number: 3 (lower is better)
Translates to: CFSASSRSDSRC*ITTVNASNLVL
Trigger: TAATACCAAGTTTGAGGCATTGACAGTTGTGATTCAGCACCTGCTGTCTGAGCGGGAGGAAGCACTGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CCA 72 bp TTTCAGCACCTGGAAGATGAGCTGGCTCTGGGGCTCTaGAAAATCATATTCCTTTATCCTTGTCCCAGAGAA +
Preference number: 3 (lower is better)
Translates to: FQHLEDELALGL*KIIFLYPCPRE
Trigger: TTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTGCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: DCFLLSSTASSVSTESYLVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAGGTGGAAAAACCCATaGGTACTTCCCTTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPRWKNP*VLPFFF
Trigger: AAAGAAAAAGGGAAGTACCAATGGGTTTTTCCACCT...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACAGGCTTTAGTTTATTaGGAAAGTGGTTTCAGCACC +
Preference number: 3 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKQALVY*ESGFST
Trigger: GGTGCTGAAACCACTTTCCAAATAAACTAAAGCCTG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCTGCGCAGCATTTAAGTaGTCAAACTGCTCTTGCAAT +
Preference number: 3 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFCAAFK*SNCSCN
Trigger: ATTGCAAGAGCAGTTTGACAACTTAAATGCTGCGCA...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR TCA 72 bp GCAGGGAACAACACAAGATTTACCATGCCTAGGGGATaGATGGCAAACCCAACTTTGGCTAATGTCATTGAG +
Preference number: 3 (lower is better)
Translates to: AGNNTRFTMPRG*MANPTLANVIE
Trigger: CTCAATGACATTAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CCA 72 bp TTACCATGCCTAGGGGATGAATGGCAAACCCAACTTTaGCTAATGTCATTGAGAACAACTTGGAAGCGTGAG +
Preference number: 3 (lower is better)
Translates to: LPCLGDEWQTQL*LMSLRTTWKRE
Trigger: CTCACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGGTAGAAGGTTTGCTTTaGTGGCTCTGGATGGTGGAG +
Preference number: 3 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKVEGLL*WLWMVE
Trigger: CTCCACCATCCAGAGCCACAAAAGCAAACCTTCTAC...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGCAGGCTTTAGTTTATTaGGAAAGTGGTTTCAGCACC +
Preference number: 3 (lower is better)
Translates to: KEADHSATFPKTKGLLKGQALVY*ESGFST
Trigger: GGTGCTGAAACCACTTTCCAAATAAACTAAAGCCTG...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTATGGCAAACCCAACTTaGGCTAATGTCATTGAGAAC +
Preference number: 3 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILMANPT*ANVIEN
Trigger: GTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCAT...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACATGGCAAACCCAACTTaGGCTAATGTCATTGAGAAC +
Preference number: 3 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHMANPT*ANVIEN
Trigger: GTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCAT...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 72 bp TGCTTGTCCATCCGAGCTTTCAATTCTTCATTCTCCTaGTGGAAACGCTTCAATTTGTCAACCAATGCTGTG +
Preference number: 3 (lower is better)
Translates to: CLSIRAFNSSFS*WKRFNLSTNAV
Trigger: CACAGCATTGGTTGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATTGAAAGCTCGGATGGACAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CCA 72 bp TTTGGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTaGACAAGCCACATTTTCCACTCATGGGAAAGAAGC +
Preference number: 3 (lower is better)
Translates to: FGKKLKCNLEES*TSHIFHSWERS
Trigger: GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CCA 72 bp CAAACCCAACTTTGGCTAATGTCATTGAGAACAACTTaGAAGCGTGAGCAGAGATATCTCATGAAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: QTQLWLMSLRTT*KREQRYLMKWQ
Trigger: CTGCCACTTCATGAGATATCTCTGCTCACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAGTTGGGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAATTTTCTTCTATGGCTTaGGCTGAAATGTATATGCTG +
Preference number: 3 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKFSSMA*AEMYML
Trigger: CAGCATATACATTTCAGCCAAAGCCATAGAAGAAAA...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACGTAGAAGGTTTGCTTTaGTGGCTCTGGATGGTGGAG +
Preference number: 3 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYVEGLL*WLWMVE
Trigger: CTCCACCATCCAGAGCCACAAAAGCAAACCTTCTAC...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACAGTAGAAGGTTTGCTTTaGTGGCTCTGGATGGTGGAG +
Preference number: 3 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTVEGLL*WLWMVE
Trigger: CTCCACCATCCAGAGCCACAAAAGCAAACCTTCTAC...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGTCACTCTTCAGATCATaGATTTGCTTCTCTAGCGAT +
Preference number: 3 (lower is better)
Translates to: KEADHSATFPKTKGLLKGSLFRS*ICFSSD
Trigger: ATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTGA...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTGAGAGTCTGTGGACTTaGGGGAGGTGTCATCTGGGT +
Preference number: 3 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFESLWT*GRCHLG
Trigger: ACCCAGATGACACCTCCCCAAAGTCCACAGACTCTC...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR TCA 72 bp CTTTCCCAAAGACAAAGGGACTCCTTAAAGGGTAACTaGAAAATGAGCGCTATCCTCCCAGACTGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: LSQRQRDSLKGN*KMSAILPDCFL
Trigger: AAGAAAACAGTCTGGGAGGATAGCGCTCATTTTTCAGTTACCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR TCA 72 bp TGGAAGCGTGAGCAGAGATATCTCATGAAGTGGCAGTaGACCTACATTTCCATTTATCAGAAGCAAACATGG +
Preference number: 3 (lower is better)
Translates to: WKREQRYLMKWQ*TYISIYQKQTW
Trigger: CCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCCACTTCATGAGATATCTCTGCTCACGCTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR TCA 72 bp ACTTTGGCTAATGTCATTGAGAACAACTTGGAAGCGTaGGCAGAGATATCTCATGAAGTGGCAGTGAACCTA +
Preference number: 3 (lower is better)
Translates to: TLANVIENNLEA*AEISHEVAVNL
Trigger: TAGGTTCACTGCCACTTCATGAGATATCTCTGCTCACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 72 bp AAAAAGGCAATGAACAAGATGCTCTCGTTCTTTAAGTaGTTTGTGCAACAACGTCCGTGTCGATGCCGAAAT +
Preference number: 3 (lower is better)
Translates to: KKAMNKMLSFFK*FVQQRPCRCRN
Trigger: ATTTCGGCATCGACACGGACGTTGTTGCACAAAGCACTTAAAGAACGAGAGCATCTTGTTCATTGCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR GCA 72 bp AATGCCTCAAACTTGGTATTACCACAGGCAAGAAGCTaGTTGAGCTGCAGGATAAATCCACTTTGGTTTTCA +
Preference number: 3 (lower is better)
Translates to: NASNLVLPQARS*LSCRINPLWFS
Trigger: TGAAAACCAAAGTGGATTTATCCTGCAGCTCAAGCAGCTTCTTGCCTGTGGTAATACCAAGTTTGAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CCA 72 bp GGAACAACACAAGATTTACCATGCCTAGGGGATGAATaGCAAACCCAACTTTGGCTAATGTCATTGAGAACA +
Preference number: 3 (lower is better)
Translates to: GTTQDLPCLGDE*QTQLWLMSLRT
Trigger: TGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CCA 72 bp TTGTCCATCCGAGCTTTCAATTCTTCATTCTCCTGCTaGAAACGCTTCAATTTGTCAACCAATGCTGTGTTG +
Preference number: 3 (lower is better)
Translates to: LSIRAFNSSFSC*KRFNLSTNAVL
Trigger: CAACACAGCATTGGTTGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATTGAAAGCTCGGATGGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACACGTTCTTTAAGTGCTTaGTGCAACAACGTCCGTGTC +
Preference number: 3 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTRSLSA*CNNVRV
Trigger: GACACGGACGTTGTTGCACAAAGCACTTAAAGAACG...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp AATGCTGTGTTGTTGTCCACCAGTTTCTCCATTTTCATTAACTTGATGTCCTGTCGTTCTTTAAGTGCTTaGTGCAACAACGTCCGTGTC +
Preference number: 3 (lower is better)
Translates to: NAVLLSTSFSIFINLMSCRSLSA*CNNVRV
Trigger: GACACGGACGTTGTTGCACAAAGCACTTAAAGAACG...ACAGGACATCAAGTTAATGAAAATGGAGAAACTGGTGGACAACAACACAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGTTTTCTTCTATGGCTTaGGCTGAAATGTATATGCTG +
Preference number: 3 (lower is better)
Translates to: KEADHSATFPKTKGLLKGFSSMA*AEMYML
Trigger: CAGCATATACATTTCAGCCAAAGCCATAGAAGAAAA...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTGTCAATGCCTCAAACTaGGTATTACCACAGGCAAGA +
Preference number: 3 (lower is better)
Translates to: DCFLLSSTASSVSTESYLVNASN*VLPQAR
Trigger: TCTTGCCTGTGGTAATACCAAGTTTGAGGCATTGAC...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR GCA 72 bp GTCTGTGGCTGGATACATAAGCTTCGAGGATTCTTTTaGCTGCTCTTTTCAACTGCATTAAGAGCTGTAAAT +
Preference number: 3 (lower is better)
Translates to: VCGWIHKLRGFF*LLFSTALRAVN
Trigger: ATTTACAGCTCTTAATGCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAGCTTATGTATCCAGCCACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATGTAGAAGGTTTGCTTTaGTGGCTCTGGATGGTGGAG +
Preference number: 3 (lower is better)
Translates to: LKTHKKVSVVKNITKVINVEGLL*WLWMVE
Trigger: CTCCACCATCCAGAGCCACAAAAGCAAACCTTCTAC...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTCAGGCTTTAGTTTATTaGGAAAGTGGTTTCAGCACC +
Preference number: 3 (lower is better)
Translates to: DCFLLSSTASSVSTESYLQALVY*ESGFST
Trigger: GGTGCTGAAACCACTTTCCAAATAAACTAAAGCCTG...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACATGGCAAACCCAACTTaGGCTAATGTCATTGAGAAC +
Preference number: 3 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYMANPT*ANVIEN
Trigger: GTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCAT...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CCA 72 bp TTTCAACTTCATACTCACTACTCACAAACCAACCCTTaGAAGTACAACGGATTTACTGTTTATCAAGAGGGG +
Preference number: 3 (lower is better)
Translates to: FQLHTHYSQTNP*KYNGFTVYQEG
Trigger: CCCCTCTTGATAAACAGTAAATCCGTTGTACTTCCAAGGGTTGGTTTGTGAGTAGTGAGTATGAAGTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519066.5
3UTR-3UTR CAA 90 bp AATGCTGTGTTGTTGTCCACCAGTTTCTCCATTTTCATTAACTTGATGTCCTGTCATATTCCTTTATCCTaGTCCCAGAGAAAAGTAGGT +
Preference number: 3 (lower is better)
Translates to: NAVLLSTSFSIFINLMSCHIPLS*SQRKVG
Trigger: ACCTACTTTTCTCTGGGACAAGGATAAAGGAATATG...ACAGGACATCAAGTTAATGAAAATGGAGAAACTGGTGGACAACAACACAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR-3UTR CAA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACTTTTCTTCTATGGCTTaGGCTGAAATGTATATGCTG +
Preference number: 3 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYFSSMA*AEMYML
Trigger: CAGCATATACATTTCAGCCAAAGCCATAGAAGAAAA...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTCTTTGGCTAATGTCATaGAGAACAACTTGGAAGCGT +
Preference number: 3 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFLWLMS*RTTWKR
Trigger: ACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAG...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATCTTTGGCTAATGTCATaGAGAACAACTTGGAAGCGT +
Preference number: 3 (lower is better)
Translates to: LKTHKKVSVVKNITKVINLWLMS*RTTWKR
Trigger: ACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAG...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTAGGTGGAAAAACCCATaGGTACTTCCCTTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFRWKNP*VLPFFF
Trigger: AAAGAAAAAGGGAAGTACCAATGGGTTTTTCCACCT...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR-3UTR CAA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTCATATTCCTTTATCCTaGTCCCAGAGAAAAGTAGGT +
Preference number: 3 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFHIPLS*SQRKVG
Trigger: ACCTACTTTTCTCTGGGACAAGGATAAAGGAATATG...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR TCA 72 bp TTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTaGATCCTACCTTTCTTAATTATACTAGCCAATGAC +
Preference number: 3 (lower is better)
Translates to: FSSIKYCIIGKH*ILPFLIILAND
Trigger: GTCATTGGCTAGTATAATTAAGAAAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACG +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDARFRRW*RSSYPT
Trigger: CGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR CAA 72 bp TGCTGTAAGTGCTCAGCTCACTGTGGGTGCTGGCTATaGAGGGGGTGCTTCCTGTCCTCCGCAGCGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CCKCSAHCGCWL*RGCFLSSAAQD
Trigger: GTCCTGCGCTGCGGAGGACAGGAAGCACCCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCACTTACAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGGCCCGAATTCCTTGGTaGCTGCAAAGGGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTARIPW*LQRDGG
Trigger: TCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGC...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACG +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPRFRRW*RSSYPT
Trigger: CGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCG...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACG +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRRFRRW*RSSYPT
Trigger: CGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCG...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCTGCGCTGGCCCACGTaGGACCCGCCTCCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPLRWPT*DPPPLR
Trigger: GCGGAGCGGAGGCGGGTCTCACGTGGGCCAGCGCAG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381869.5
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGCCCGCTTGCTTCTGCTaGGAAGGGGCCCTGCGAGAA +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRPACFC*EGALRE
Trigger: TTCTCGCAGGGCCCCTTCTCAGCAGAAGCAAGCGGG...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381869.5
CDS-3UTR TCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGAGGCACTGGTCTGCTaGGGTCTGGGCGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPEALVC*GLGVTF
Trigger: AAAGGTCACGCCCAGACCTCAGCAGACCAGTGCCTC...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTGCCCGAATTCCTTGGTaGCTGCAAAGGGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAARIPW*LQRDGG
Trigger: TCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGC...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGCCCGAATTCCTTGGTaGCTGCAAAGGGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPARIPW*LQRDGG
Trigger: TCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTGGGGTCTTTGGGACCTaGAGCAACCCTATTCCACCC +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAGVFGT*SNPIPP
Trigger: GGGTGGAATAGGGTTGCTGCAGGTCCCAAAGACCCC...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381869.5
CDS-3UTR CCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACGTGCTCAGCTCACTGTaGGTGCTGGCTATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHVLSSL*VLAIEG
Trigger: CCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCAC...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR CCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGGCCCACGTTCCTCCTTaGGGTCAGTCCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRAHVPP*GQSCRP
Trigger: AGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGC...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAGCCCGAATTCCTTGGTaGCTGCAAAGGGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIARIPW*LQRDGG
Trigger: TCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGC...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTGAGGTGTCATCTGGGTaGAATGCTGGGGCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAEVSSG*NAGARE
Trigger: TTCCCTAGCCCCAGCATTTCACCCAGATGACACCTC...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCACCCTTCCGCAGGCTCTaGGCTGGCCCACGTGAGACC +
Preference number: 4 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPPFRRL*AGPRET
Trigger: GGTCTCACGTGGGCCAGCGCAGAGCCTGCGGAAGGG...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381869.5
CDS-3UTR CCA 90 bp GGGAAGGAGCCCGAATTCCTTGGTGACTGCAAAGGGATGGCGGAGGATGTGGGGAGAGTCTGTGGACTTTaGGGAGGTGTCATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GKEPEFLGDCKGMAEDVGRVCGL*GGVIWV
Trigger: CACCCAGATGACACCTCCCCAAAGTCCACAGACTCT...CCCCACATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGGCCCACGTTCCTCCTTaGGGTCAGTCCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPAHVPP*GQSCRP
Trigger: AGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGC...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGCTGAGGTCTGGGCGTaGCCTTTGATAAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPAEVWA*PLIKQH
Trigger: ATGCTGCTTTATCAAAGGTCACGCCCAGACCTCAGC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATGCTGAGGTCTGGGCGTaGCCTTTGATAAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDAEVWA*PLIKQH
Trigger: ATGCTGCTTTATCAAAGGTCACGCCCAGACCTCAGC...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGACACGCCTGATCCTCTaGGGAGATACGGCTCGATCA +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRTRLIL*GDTARS
Trigger: TGATCGAGCCGTATCTCCTCAGAGGATCAGGCGTGT...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACGTGGAAAGCTGCCTTaGGATTGCCATGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPRGKLP*DCHVLV
Trigger: GACAAGCACATGGCAATCTCAAGGCAGCTTTCCACG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGCCCGAATTCCTTGGTaGCTGCAAAGGGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGARIPW*LQRDGG
Trigger: TCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGC...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAGAGGTGTCATCTGGGTaGAATGCTGGGGCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIEVSSG*NAGARE
Trigger: TTCCCTAGCCCCAGCATTTCACCCAGATGACACCTC...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCTGACATCACAATGTTaGCACATGCAGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHLTSQC*HMQGGG
Trigger: TCCCCCTCCCTGCATGTGTCAACATTGTGATGTCAG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACTCTTGCAGAACAGCCTaGTCCGTGGAAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHSCRTA*SVESCL
Trigger: AAGGCAGCTTTCCACGGAGCAGGCTGTTCTGCAAGA...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPLIYLL*PRSSLG
Trigger: CCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGTCCAGTCTCAGAAGCTaGGATTCCGCCGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPSSLRS*DSAGGD
Trigger: GTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGA...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACACAGCAGAGGAGGCTaGATCAGACACATGACACTC +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPHSRGG*IRHMTL
Trigger: GAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACAGCAGAGGAGGCTaGATCAGACACATGACACTC +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDHSRGG*IRHMTL
Trigger: GAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTG...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCACAGCAGAGGAGGCTaGATCAGACACATGACACTC +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHHSRGG*IRHMTL
Trigger: GAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGCACAAAAGGCAAAGATaGCTCAACACTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTHKRQR*LNTLAL
Trigger: GAGGGCCAGAGTGTTGAGCCATCTTTGCCTTTTGTG...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACTTCTCCTACCAGTTaGTGGCAGGCTTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHTSPTS*WQASSS
Trigger: ACTGCTGGAAGCCTGCCACCAACTGGTAGGAGAAGT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACGAACAGCCTGCTCCGTaGAAAGCTGCCTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHEQPAP*KAALRL
Trigger: CAATCTCAAGGCAGCTTTCCACGGAGCAGGCTGTTC...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACAGAGTCTGTGGACTTTaGGGAGGTGTCATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHRVCGL*GGVIWV
Trigger: CACCCAGATGACACCTCCCCAAAGTCCACAGACTCT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATAGAGTCTGTGGACTTTaGGGAGGTGTCATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDRVCGL*GGVIWV
Trigger: CACCCAGATGACACCTCCCCAAAGTCCACAGACTCT...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACGGGCTTCTGATGGTGTaGCTTGAGGGTTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHGLLMV*LEGFQS
Trigger: GCTTTGAAAACCCTCAAGTCACACCATCAGAAGCCC...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGGGCTTCTGATGGTGTaGCTTGAGGGTTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPGLLMV*LEGFQS
Trigger: GCTTTGAAAACCCTCAAGTCACACCATCAGAAGCCC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGCCAAGTCAGTCCAAATaGCGAGCCCACCTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRPSQSK*RAHLLS
Trigger: GGACAAAAGGTGGGCTCGTCATTTGGACTGACTTGG...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGCCCGGTCTCGCATGCTaGGTTAGAAGAACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRPGLAC*VRRTGF
Trigger: AAAGCCAGTTCTTCTAACTCAGCATGCGAGACCGGG...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGACACGCCTGATCCTCTaGGGAGATACGGCTCGATCA +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPTRLIL*GDTARS
Trigger: TGATCGAGCCGTATCTCCTCAGAGGATCAGGCGTGT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCATCAGACAGCAGGTGCTaGATCACAACTGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPSDSRC*ITTVNA
Trigger: GGCATTGACAGTTGTGATTCAGCACCTGCTGTCTGA...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACTCAGACAGCAGGTGCTaGATCACAACTGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHSDSRC*ITTVNA
Trigger: GGCATTGACAGTTGTGATTCAGCACCTGCTGTCTGA...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGGAGGTGTCATCTGGGTaGAATGCTGGGGCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPEVSSG*NAGARE
Trigger: TTCCCTAGCCCCAGCATTTCACCCAGATGACACCTC...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACG +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWRFRRW*RSSYPT
Trigger: CGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCG...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTACCATGCCTAGGGGATaGATGGCAAACCCAACTTTG +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDATMPRG*MANPTL
Trigger: CAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGT...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATACCATGCCTAGGGGATaGATGGCAAACCCAACTTTG +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDTMPRG*MANPTL
Trigger: CAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGT...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTTTGGAGCAGCTATTTaGCTCAAACCGCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTFGAAI*LKPQES
Trigger: TGACTCCTGCGGTTTGAGGCAAATAGCTGCTCCAAA...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGCTTGAGATTGCCATGTaGTTGTCCATCCGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTLEIAM*LSIRAF
Trigger: GAAAGCTCGGATGGACAAGCACATGGCAATCTCAAG...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATATGCTCCGTGGAAAGCTaGCTTGAGATTGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADICSVES*LEIAMC
Trigger: GCACATGGCAATCTCAAGGCAGCTTTCCACGGAGCA...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGTTCTCCAGCGACTCTTaGAGAACAGCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPFSSDS*RTACSV
Trigger: CACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAA...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTTTCTCCAGCGACTCTTaGAGAACAGCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGFSSDS*RTACSV
Trigger: CACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAA...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATGAATTCCTTGGTGACTaGAAAGGGATGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDEFLGD*KGMAED
Trigger: ATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTC...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGACTTCTCCTACCAGTTaGTGGCAGGCTTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPTSPTS*WQASSS
Trigger: ACTGCTGGAAGCCTGCCACCAACTGGTAGGAGAAGT...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCGCAGGAGTCAGGCTTaGATATATTCCTACCTGAGG +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDRRSQA*IYSYLR
Trigger: CCTCAGGTAGGAATATATCCAAGCCTGACTCCTGCG...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAGAACAGCCTGCTCCGTaGAAAGCTGCCTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIEQPAP*KAALRL
Trigger: CAATCTCAAGGCAGCTTTCCACGGAGCAGGCTGTTC...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTGTGACTGCAAAGGGATaGCGGAGGATGTGGGGGATC +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGVTAKG*RRMWGI
Trigger: GATCCCCCACATCCTCCGCCATCCCTTTGCAGTCAC...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGCTTTCAGAGAGTCTGTaGACTTTGGGGAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTLSESL*TLGRCH
Trigger: ATGACACCTCCCCAAAGTCCACAGACTCTCTGAAAG...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
3UTR CAA 72 bp TACCCTACGGTGATCACACGTGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTGGGGTCAGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: YPTVITRVLIYL*CPRSSLGSVLQ
Trigger: CTGCAGGACTGACCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAGCACACGTGTGATCACCGTAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCTGTGTACTCACTGGTaGCCTTTCCTGAAGAACATG +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDLCTHW*PFLKNM
Trigger: CATGTTCTTCAGGAAAGGTCACCAGTGAGTACACAG...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACTGTGTACTCACTGGTaGCCTTTCCTGAAGAACATG +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPLCTHW*PFLKNM
Trigger: CATGTTCTTCAGGAAAGGTCACCAGTGAGTACACAG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGGCTGAGGTCTGGGCGTaGCCTTTGATAAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPAEVWA*PLIKQH
Trigger: ATGCTGCTTTATCAAAGGTCACGCCCAGACCTCAGC...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCAGGGAGTATGCCTTTaGTCTTCTGAAACAACGCAG +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHQGVCL*SSETTQ
Trigger: CTGCGTTGTTTCAGAAGATCAAAGGCATACTCCCTG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTGGTGGTCGTTGTTTTTaGAGCAGAGCCCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAGGRCF*SRAQKQ
Trigger: CTGTTTTTGGGCTCTGCTTCAAAAACAACGACCACC...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGTCAGACAGCAGGTGCTaGATCACAACTGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPSDSRC*ITTVNA
Trigger: GGCATTGACAGTTGTGATTCAGCACCTGCTGTCTGA...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGTTTTGTGTTGTTTCAGTGCTTCCTCCCGCTCAGACAGCAGGTGCTGAATCACGCCCGAATTCCTTGGTaGCTGCAAAGGGATGGCGGA +
Preference number: 4 (lower is better)
Translates to: GFVLFQCFLPLRQQVLNHARIPW*LQRDGG
Trigger: TCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGC...GTGATTCAGCACCTGCTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATGCTGCATCAGACACATaGCACTCTGTGACATCCATT +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDAASDT*HSVTSI
Trigger: AATGGATGTCACAGAGTGTCATGTGTCTGATGCAGC...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACAGGGTAACTGAAAAATaGGCGCTATCCTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHRVTEK*ALSSQT
Trigger: AGTCTGGGAGGATAGCGCTCATTTTTCAGTTACCCT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGGACTGGTGTTGACATaGACATCGTTTTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPGLVLT*TSFCLC
Trigger: GCACAGACAAAACGATGTGCATGTCAACACCAGTCC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR GCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGCAGCATCTTTGGGCTaGAACACTGCTCTAGACATA +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPAASLG*NTALDI
Trigger: TATGTCTAGAGCAGTGTTGCAGCCCAAAGATGCTGC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTGCAGCATCTTTGGGCTaGAACACTGCTCTAGACATA +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAAASLG*NTALDI
Trigger: TATGTCTAGAGCAGTGTTGCAGCCCAAAGATGCTGC...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGAGAAGCTGCTTGAGCTaGAGGATAAATCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTRSCLS*RINPLW
Trigger: CCAAAGTGGATTTATCCTGCAGCTCAAGCAGCTTCT...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCCACAGGCAAGAAGCTaGTTGAGCTGCAGGATAAAT +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHPQARS*LSCRIN
Trigger: ATTTATCCTGCAGCTCAAGCAGCTTCTTGCCTGTGG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCCACAGGCAAGAAGCTaGTTGAGCTGCAGGATAAAT +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDPQARS*LSCRIN
Trigger: ATTTATCCTGCAGCTCAAGCAGCTTCTTGCCTGTGG...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACCACAGGCAAGAAGCTaGTTGAGCTGCAGGATAAAT +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPPQARS*LSCRIN
Trigger: ATTTATCCTGCAGCTCAAGCAGCTTCTTGCCTGTGG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCTTGAGATTGCCATGTaGTTGTCCATCCGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDALEIAM*LSIRAF
Trigger: GAAAGCTCGGATGGACAAGCACATGGCAATCTCAAG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGTCTTGCAGAACAGCCTaGTCCGTGGAAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPSCRTA*SVESCL
Trigger: AAGGCAGCTTTCCACGGAGCAGGCTGTTCTGCAAGA...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAGAATTCCTTGGTGACTaGAAAGGGATGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIEFLGD*KGMAED
Trigger: ATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTC...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGGAATTCCTTGGTGACTaGAAAGGGATGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRREFLGD*KGMAED
Trigger: ATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTC...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGGAAGGAGCCCGAATTCCTTGGTGACTGCAAAGGGATGGCGGAGGATGTGGGGCTCTCGTTCTTTAAGTaGTTTGTGCAACAACGTCCG +
Preference number: 4 (lower is better)
Translates to: GKEPEFLGDCKGMAEDVGLSFFK*FVQQRP
Trigger: CGGACGTTGTTGCACAAAGCACTTAAAGAACGAGAG...CCCCACATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR GCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACAATGTTGACACATaGAGGGAGGGGGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDHNVDT*REGEIK
Trigger: CTTTATCTCCCCCTCCCTGCATGTGTCAACATTGTG...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCACAATGTTGACACATaGAGGGAGGGGGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAHNVDT*REGEIK
Trigger: CTTTATCTCCCCCTCCCTGCATGTGTCAACATTGTG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTATTCCTGAAGTaGCAGGGTATGCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAPVFLK*QGMQLL
Trigger: AAGTAGCTGCATACCCTGGCACTTCAGGAATACTGG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544260.3
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGGATGGCTCAACACTCTaGCCCTCAACTGCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPDGSTL*PSTASR
Trigger: CCTAGAAGCAGTTGAGGGCCAGAGTGTTGAGCCATC...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTTGCCTCCTTCGAGTCTaGTATGTTTTTAAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDACLLRV*YVFKPS
Trigger: CGAGGGCTTAAAAACATACCAGACTCGAAGGAGGCA...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCGGCTCGATCAGCACTaGGATTTCTATTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDARLDQH*DFYCHC
Trigger: ACAGTGACAATAGAAATCCCAGTGCTGATCGAGCCG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGGTGACTGCAAAGGGATaGCGGAGGATGTGGGGGATC +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWVTAKG*RRMWGI
Trigger: GATCCCCCACATCCTCCGCCATCCCTTTGCAGTCAC...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAGCCCACGTTCCTCCTTaGGGTCAGTCCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPAHVPP*GQSCRP
Trigger: AGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGC...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACAACCTGGAGGAGAGTTaGACAAGCCACATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHNLEES*TSHIFH
Trigger: GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTTTGTGTAGGTGGTaGTTTCGGGTTGTATGCATG +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPVLCRW*FRVVCM
Trigger: CATGCATACAACCCGAAATCACCACCTACACAAAAC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATGTTTTGTGTAGGTGGTaGTTTCGGGTTGTATGCATG +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDVLCRW*FRVVCM
Trigger: CATGCATACAACCCGAAATCACCACCTACACAAAAC...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACTCTTTCCGATGGCATaGTGTGATATAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPLFPMA*CDIKVQ
Trigger: CTGCACCTTTATATCACATCATGCCATCGGAAAGAG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCTCTTTCCGATGGCATaGTGTGATATAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDALFPMA*CDIKVQ
Trigger: CTGCACCTTTATATCACATCATGCCATCGGAAAGAG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCATCTGGGTTCAGCACTTaGGCTTCGCTCTTATCAAAA +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPSGFST*ASLLSK
Trigger: TTTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGA...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAGAGGCACTGGTCTGCTaGGGTCTGGGCGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKEALVC*GLGVTF
Trigger: AAAGGTCACGCCCAGACCTCAGCAGACCAGTGCCTC...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCGAGGCACTGGTCTGCTaGGGTCTGGGCGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFEALVC*GLGVTF
Trigger: AAAGGTCACGCCCAGACCTCAGCAGACCAGTGCCTC...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAATGCCTTTGATCTTCTaGAACAACGCAGAAACGGAC +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPMPLIF*NNAETD
Trigger: GTCCGTTTCTGCGTTGTTTCAGAAGATCAAAGGCAT...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTGCCTTTCTTAATTTCTaGAAGGGAGGCTTCATAGGC +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAAFLNF*KGGFIG
Trigger: GCCTATGAAGCCTCCCTTTCAGAAATTAAGAAAGGC...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGCCTTTCTTAATTTCTaGAAGGGAGGCTTCATAGGC +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPAFLNF*KGGFIG
Trigger: GCCTATGAAGCCTCCCTTTCAGAAATTAAGAAAGGC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAGAGGTGTCATCTGGGTaGAATGCTGGGGCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGEVSSG*NAGARE
Trigger: TTCCCTAGCCCCAGCATTTCACCCAGATGACACCTC...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACG +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILRFRRW*RSSYPT
Trigger: CGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAATCTTAATAGGGCCCTaGGAGTTTTTCCCCCTATGC +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIILIGP*EFFPLC
Trigger: GCATAGGGGGAAAAACTCTCAGGGCCCTATTAAGAT...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAGCTGCATCAGACACATaGCACTCTGTGACATCCATT +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIAASDT*HSVTSI
Trigger: AATGGATGTCACAGAGTGTCATGTGTCTGATGCAGC...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTACCATGCCTAGGGGATaGATGGCAAACCCAACTTTG +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGTMPRG*MANPTL
Trigger: CAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGT...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGCTCAGTACCTACAAGTaGAGGACACTGACAAATAGA +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTLSTYK*RTLTNR
Trigger: TCTATTTGTCAGTGTCCTGCACTTGTAGGTACTGAG...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR GCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGGGACTGGTGTTGACATaGACATCGTTTTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRGLVLT*TSFCLC
Trigger: GCACAGACAAAACGATGTGCATGTCAACACCAGTCC...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTTTGGGCTGCAACACTaGTCTAGACATAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTFGLQH*SRHNFC
Trigger: GCAAAAGTTATGTCTAGAGCAGTGTTGCAGCCCAAA...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR GCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGGCTATTGAGGGGGTaGTTCCTGTCCTCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPWLLRG*FLSSAA
Trigger: CGCTGCGGAGGACAGGAAGCACCCCCTCAATAGCCA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR GCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCATCAGCTCACTGTGGGTaGTGGCTATTGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPSAHCG*WLLRGC
Trigger: GCACCCCCTCAATAGCCAGCACCCACAGTGAGCTGA...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR GCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGAATTGTTGCTGTAAGTaGTCAGCTCACTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRNCCCK*SAHCGC
Trigger: GCACCCACAGTGAGCTGAGCACTTACAGCAACAATT...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR GCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAAGAAGCTGCTTGAGCTaGAGGATAAATCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPRSCLS*RINPLW
Trigger: CCAAAGTGGATTTATCCTGCAGCTCAAGCAGCTTCT...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTTTTCAGCCTGGTGCTaGTGGACGAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRFSAWC*WTNASY
Trigger: GTATGAAGCATTCGTCCAGCAGCACCAGGCTGAAAA...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATATTTTCAGCCTGGTGCTaGTGGACGAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIFSAWC*WTNASY
Trigger: GTATGAAGCATTCGTCCAGCAGCACCAGGCTGAAAA...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACTCAGTCCTGCAGACCTaGATCAAAATGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHSVLQT*IKMLSE
Trigger: CTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGA...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTCTTTAAGTGCTTTGTaGAACAACGTCCGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTSLSAL*NNVRVD
Trigger: ATCGACACGGACGTTGTTGCACAAAGCACTTAAAGA...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATACCATGTCATCTGGGTTaGCAGAATTCCAGTTCACAC +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIPCHLG*QNSSSH
Trigger: GTGTGAACTGGAATTCTGCCAACCCAGATGACATGG...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATAGTGACTTTATGCTCTaGGTTCAGCACTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDSDFML*VQHLSF
Trigger: GAAGCTCAAGTGCTGAACCCAGAGCATAAAGTCACT...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTCGCAGGAGTCAGGCTTaGATATATTCCTACCTGAGG +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGRRSQA*IYSYLR
Trigger: CCTCAGGTAGGAATATATCCAAGCCTGACTCCTGCG...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCGCAGGAGTCAGGCTTaGATATATTCCTACCTGAGG +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPRRSQA*IYSYLR
Trigger: CCTCAGGTAGGAATATATCCAAGCCTGACTCCTGCG...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTCTCGAAGGACCTTTTaGAGGAGTTTTCATCAAGTG +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTSRRTF*RSFHQV
Trigger: CACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGA...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTTCAGCCTGGTGCTGCTaGACGAATGCTTCATACACT +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGSAWCC*TNASYT
Trigger: AGTGTATGAAGCATTCGTCCAGCAGCACCAGGCTGA...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCGTGACTGCAAAGGGATaGCGGAGGATGTGGGGGATC +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSVTAKG*RRMWGI
Trigger: GATCCCCCACATCCTCCGCCATCCCTTTGCAGTCAC...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAGCCCACGTTCCTCCTTaGGGTCAGTCCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKAHVPP*GQSCRP
Trigger: AGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGC...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACAAGATGAGCTGGCTCTaGGGCTCTGGAAAATCATAT +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHKMSWL*GSGKSY
Trigger: ATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATAAGATGAGCTGGCTCTaGGGCTCTGGAAAATCATAT +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDKMSWL*GSGKSY
Trigger: ATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTT...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCTGGCCAAGTGTTTCTaGCTTCCGTTTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDALAKCF*LPFSLS
Trigger: TGAAAGTGAAAACGGAAGCCAGAAACACTTGGCCAG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTCTGGGTTCAGCACTTaGGCTTCGCTCTTATCAAAA +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRSGFST*ASLLSK
Trigger: TTTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGA...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCGTCGCTTCAATCGGTaGAACAGAAAAGGTTACTTT +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDARRFNR*NRKGYF
Trigger: AAAGTAACCTTTTCTGTTTCACCGATTGAAGCGACG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCGTCGCTTCAATCGGTaGAACAGAAAAGGTTACTTT +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHRRFNR*NRKGYF
Trigger: AAAGTAACCTTTTCTGTTTCACCGATTGAAGCGACG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAGAGGCACTGGTCTGCTaGGGTCTGGGCGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKEALVC*GLGVTF
Trigger: AAAGGTCACGCCCAGACCTCAGCAGACCAGTGCCTC...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACTTGTCAACATCTTCCTaGTTCGATTTCACGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHLSTSS*FDFTAD
Trigger: ATCTGCCGTGAAATCGAATCAGGAAGATGTTGACAA...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCAGGGAGTATGCCTTTaGTCTTCTGAAACAACGCAG +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPQGVCL*SSETTQ
Trigger: CTGCGTTGTTTCAGAAGATCAAAGGCATACTCCCTG...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAACTGGACACACGCCTaGTCCTCTGAGGAGATACGG +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRNWTHA*SSEEIR
Trigger: CCGTATCTCCTCAGAGGATCAGGCGTGTGTCCAGTT...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGAACTGGACACACGCCTaGTCCTCTGAGGAGATACGG +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWNWTHA*SSEEIR
Trigger: CCGTATCTCCTCAGAGGATCAGGCGTGTGTCCAGTT...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGCACTCTTCAGATCATTaGTTTGCTTCTCTAGCGATT +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTHSSDH*FASLAI
Trigger: AATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTG...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGGAGGTGTCATCTGGGTaGAATGCTGGGGCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWEVSSG*NAGARE
Trigger: TTCCCTAGCCCCAGCATTTCACCCAGATGACACCTC...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGAGAAGGTGTCTGTGGTaGAGAACATTACAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTRRCLW*RTLQRL
Trigger: TAACCTTTGTAATGTTCTTCACCACAGACACCTTCT...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTAGGGTAACTGAAAAATaGGCGCTATCCTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGRVTEK*ALSSQT
Trigger: AGTCTGGGAGGATAGCGCTCATTTTTCAGTTACCCT...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGTTTTGTGTTGTTTCAGTGCTTCCTCCCGCTCAGACAGCAGGTGCTGAATCACCTGACATCACAATGTTaGCACATGCAGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: GFVLFQCFLPLRQQVLNHLTSQC*HMQGGG
Trigger: TCCCCCTCCCTGCATGTGTCAACATTGTGATGTCAG...GTGATTCAGCACCTGCTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAAACAACTTGGAAGCGTaGGCAGAGATATCTCATGAA +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPNNLEA*AEISHE
Trigger: TTCATGAGATATCTCTGCTCACGCTTCCAAGTTGTT...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATAACAACTTGGAAGCGTaGGCAGAGATATCTCATGAA +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDNNLEA*AEISHE
Trigger: TTCATGAGATATCTCTGCTCACGCTTCCAAGTTGTT...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGCCCATCACTACAAACTaGGCACAACTACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRPITTN*AQLQLS
Trigger: AGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGG...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAAGAGACTCACTGATTTaGATGCTTAATCCGCAACAG +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPRDSLI*MLNPQQ
Trigger: CTGTTGCGGATTAAGCATTCAAATCAGTGAGTCTCT...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381861.7
CDS-3UTR GCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCTCAGTACCTACAAGTaGAGGACACTGACAAATAGA +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDALSTYK*RTLTNR
Trigger: TCTATTTGTCAGTGTCCTGCACTTGTAGGTACTGAG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTACACAGGTTCACAGGTaGCTCCTTCGAGTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGTQVHR*LLRVWY
Trigger: ATACCAGACTCGAAGGAGGCACCTGTGAACCTGTGT...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACTTTGGGCTGCAACACTaGTCTAGACATAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHFGLQH*SRHNFC
Trigger: GCAAAAGTTATGTCTAGAGCAGTGTTGCAGCCCAAA...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR GCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGCAGATCTCGGTGTTCTaGTCAAGACTGTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPQISVF*SRLFVV
Trigger: GACAACAAACAGTCTTGAGCAGAACACCGAGATCTG...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR GCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGTCAGCTCACTGTGGGTaGTGGCTATTGAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKSAHCG*WLLRGC
Trigger: GCACCCCCTCAATAGCCAGCACCCACAGTGAGCTGA...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR GCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCTTCGAGGATTCTTTTaGCTGCTCTTTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHLRGFF*LLFSTA
Trigger: TGCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGAGAAGCTGCTTGAGCTaGAGGATAAATCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRRSCLS*RINPLW
Trigger: CCAAAGTGGATTTATCCTGCAGCTCAAGCAGCTTCT...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTCCACAGGCAAGAAGCTaGTTGAGCTGCAGGATAAAT +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGPQARS*LSCRIN
Trigger: ATTTATCCTGCAGCTCAAGCAGCTTCTTGCCTGTGG...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACAATTTGTCAACCAATaGTGTGTTGTTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPQFVNQ*CVVVHQ
Trigger: CTGGTGGACAACAACACAGCATTGGTTGACAAATTG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTCTTGAGATTGCCATGTaGTTGTCCATCCGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGLEIAM*LSIRAF
Trigger: GAAAGCTCGGATGGACAAGCACATGGCAATCTCAAG...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTGAATTCCTTGGTGACTaGAAAGGGATGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGEFLGD*KGMAED
Trigger: ATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTC...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACAGACCTGCATCAAAATaGTTTCAGAGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHRPASK*FQRVCG
Trigger: TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGLIYLL*PRSSLG
Trigger: CCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAG...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTCCATGTCATCTGGGTTaGCAGAATTCCAGTTCACAC +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGPCHLG*QNSSSH
Trigger: GTGTGAACTGGAATTCTGCCAACCCAGATGACATGG...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGAACCACCATGTCATCTaGGTTGGCAGAATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPNHHVI*VGRIPV
Trigger: AACTGGAATTCTGCCAACCCAGATGACATGGTGGTT...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTCACAAAAGGCAAAGATaGCTCAACACTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGHKRQR*LNTLAL
Trigger: GAGGGCCAGAGTGTTGAGCCATCTTTGCCTTTTGTG...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR CCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGGTAATGCAGAATCATTaGGGACTTCCATGCCATCAG +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRVMQNH*GLPCHQ
Trigger: CTGATGGCATGGAAGTCCCCAATGATTCTGCATTAC...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGAAAAGGTTACTTTTGTaGGTTCTAGGACTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTKRLLL*VLGLVL
Trigger: CAACACCAGTCCTAGAACCCACAAAAGTAACCTTTT...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACCATTCTGAAATGCTaGTTTTGGAGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHTILKC*FWRFLL
Trigger: GAGGAGAAACCTCCAAAACCAGCATTTCAGAATGGT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATTCTCGAAGGACCTTTTaGAGGAGTTTTCATCAAGTG +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDSRRTF*RSFHQV
Trigger: CACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGA...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTCTTCATTCTCCTGCTaGAAACGCTTCAATTTGTCA +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTSSFSC*KRFNLS
Trigger: TGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGA...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAGAAGGTTTGCTTTTGTaGCTCTGGATGGTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIEGLLL*LWMVEK
Trigger: TTTCTCCACCATCCAGAGCCACAAAAGCAAACCTTC...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACGTCGTATGTGAATGGTaGATAAGGAGAATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHVVCEW*IRRIWE
Trigger: CTCCCAAATTCTCCTTATCCACCATTCACATACGAC...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR CCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGTTCGAAGCAATCCTTTaGCCGTCAGTCGTATGTGAA +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPFEAIL*PSVVCE
Trigger: TTCACATACGACTGACGGCCAAAGGATTGCTTCGAA...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGACTAGACAGGCTCTGTaGGTGTATGGTAAACCCCTT +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPTRQAL*VYGKPL
Trigger: AAGGGGTTTACCATACACCCACAGAGCCTGTCTAGT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381861.7
CDS-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTGCCACGAGGGGTCTTTaGGACCTGCAGCAACCCTAT +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPATRGL*DLQQPY
Trigger: ATAGGGTTGCTGCAGGTCCCAAAGACCCCTCGTGGC...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381869.5
CDS-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTACAAGTGCAGGACACTaGCAAATAGAATCTTTATGC +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDATSAGH*QIESLC
Trigger: GCATAAAGATTCTATTTGTCAGTGTCCTGCACTTGT...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATATCCGATGGCATGATGTaGTATAAAGGTGCAGTTAAC +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADISDGMM*YKGAVN
Trigger: GTTAACTGCACCTTTATATCACATCATGCCATCGGA...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGTCTGATGGTGTGACTTaGGGGTTTTCAAAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPSDGVT*GFSKLS
Trigger: AGAAAGCTTTGAAAACCCTCAAGTCACACCATCAGA...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTCTGATGGTGTGACTTaGGGGTTTTCAAAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRSDGVT*GFSKLS
Trigger: AGAAAGCTTTGAAAACCCTCAAGTCACACCATCAGA...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACATGTCTTGGGCTTCTaGTGGTGTGACTTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGHVLGF*WCDLRV
Trigger: AACCCTCAAGTCACACCATCAGAAGCCCAAGACATG...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAATCAATTCTGAGGTATaGTTTTGGGTTCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPINSEV*FWVPKS
Trigger: GGATTTGGGAACCCAAAATCATACCTCAGAATTGAT...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGCGTCGCTTCAATCGGTaGAACAGAAAAGGTTACTTT +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPRRFNR*NRKGYF
Trigger: AAAGTAACCTTTTCTGTTTCACCGATTGAAGCGACG...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGCCCGGTCTCGCATGCTaGGTTAGAAGAACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLPGLAC*VRRTGF
Trigger: AAAGCCAGTTCTTCTAACTCAGCATGCGAGACCGGG...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGATGCCTTTGATCTTCTaGAACAACGCAGAAACGGAC +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPMPLIF*NNAETD
Trigger: GTCCGTTTCTGCGTTGTTTCAGAAGATCAAAGGCAT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGAACTGGACACACGCCTaGTCCTCTGAGGAGATACGG +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKNWTHA*SSEEIR
Trigger: CCGTATCTCCTCAGAGGATCAGGCGTGTGTCCAGTT...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACAAATAAAAGGATCCTaGGGAACCATTCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPQIKGS*GTILKC
Trigger: GCATTTCAGAATGGTTCCTCAGGATCCTTTTATTTG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCAAATAAAAGGATCCTaGGGAACCATTCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHQIKGS*GTILKC
Trigger: GCATTTCAGAATGGTTCCTCAGGATCCTTTTATTTG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCAATTCAAGTTTCTCTaGGTGGCTAGCTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDQFKFL*VASFNF
Trigger: GAAATTGAAGCTAGCCACTCAGAGAAACTTGAATTG...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCAATTCAAGTTTCTCTaGGTGGCTAGCTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHQFKFL*VASFNF
Trigger: GAAATTGAAGCTAGCCACTCAGAGAAACTTGAATTG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACTCTTCAGATCATTaGTTTGCTTCTCTAGCGATT +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDHSSDH*FASLAI
Trigger: AATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTG...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCACTCTTCAGATCATTaGTTTGCTTCTCTAGCGATT +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAHSSDH*FASLAI
Trigger: AATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATAACTTGATGTCCTGTTaGTGCAGTTTCTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDNLMSC*CSFSFL
Trigger: CAAGAATGAGAAACTGCATCAACAGGACATCAAGTT...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGCCATTTTCATTAACTTaGTGTCCTGTTGATGCAGTT +
Preference number: 4 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTPFSLT*CPVDAV
Trigger: AACTGCATCAACAGGACATCAAGTTAATGAAAATGG...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGCGTGGAAAGCTGCCTTaGGATTGCCATGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWRGKLP*DCHVLV
Trigger: GACAAGCACATGGCAATCTCAAGGCAGCTTTCCACG...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACAGAAGGTGTCTGTGGTaGAGAACATTACAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHRRCLW*RTLQRL
Trigger: TAACCTTTGTAATGTTCTTCACCACAGACACCTTCT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTGCTGCATCAGACACATaGCACTCTGTGACATCCATT +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGAASDT*HSVTSI
Trigger: AATGGATGTCACAGAGTGTCATGTGTCTGATGCAGC...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTAGGGTAACTGAAAAATaGGCGCTATCCTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGRVTEK*ALSSQT
Trigger: AGTCTGGGAGGATAGCGCTCATTTTTCAGTTACCCT...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACTCATGAAGTGGCAGTaGACCTACATTTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPLMKWQ*TYISIY
Trigger: ATAAATGGAAATGTAGGTTCACTGCCACTTCATGAG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCTCATGAAGTGGCAGTaGACCTACATTTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHLMKWQ*TYISIY
Trigger: ATAAATGGAAATGTAGGTTCACTGCCACTTCATGAG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAATCATAGTGCCTCTCTaGACCAGCCGGTGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKIIVPL*TSRWGE
Trigger: CTCACCCCACCGGCTGGTTCAGAGAGGCACTATGAT...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381861.7
CDS-3UTR TCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCGGTCACTTTCAAGGTaGCAGCGACGAGATCCGCAT +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPRSLSR*QRRDPH
Trigger: ATGCGGATCTCGTCGCTGTCACCTTGAAAGTGACCG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381869.5
CDS-3UTR TCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGATATCCCAGTATTCCTaGAGTGCCAGGGTATGCAGC +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWISQYS*SARVCS
Trigger: GCTGCATACCCTGGCACTTCAGGAATACTGGGATAT...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGGGCATCACAGTAGCCTaGACAGTTCAAATTGTCATT +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRGITVA*TVQIVI
Trigger: AATGACAATTTGAACTGTGCAGGCTACTGTGATGCC...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR GCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTGTAGTTTCTCTTGCATaGGTCTTATCAGAATGGGAA +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAVVSLA*VLSEWE
Trigger: TTCCCATTCTGATAAGACGCATGCAAGAGAAACTAC...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR GCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATACATTACCAGAATTGTTaGTGTAAGTGCTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIHYQNC*CKCSAH
Trigger: GTGAGCTGAGCACTTACAGCAACAATTCTGGTAATG...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR GCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGCTTCGAGGATTCTTTTaGCTGCTCTTTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRLRGFF*LLFSTA
Trigger: TGCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAG...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTAGAAGCTGCTTGAGCTaGAGGATAAATCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGRSCLS*RINPLW
Trigger: CCAAAGTGGATTTATCCTGCAGCTCAAGCAGCTTCT...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTTTCAGATCATTGATTTaGTTCTCTAGCGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAFRSLI*FSSDSC
Trigger: GCAGGAATCGCTAGAGAAGCAAATCAATGATCTGAA...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATACAATTTGTCAACCAATaGTGTGTTGTTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIQFVNQ*CVVVHQ
Trigger: CTGGTGGACAACAACACAGCATTGGTTGACAAATTG...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGTGCTCCGTGGAAAGCTaGCTTGAGATTGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWCSVES*LEIAMC
Trigger: GCACATGGCAATCTCAAGGCAGCTTTCCACGGAGCA...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCTGCTCCGTGGAAAGCTaGCTTGAGATTGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSCSVES*LEIAMC
Trigger: GCACATGGCAATCTCAAGGCAGCTTTCCACGGAGCA...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGTGCTCCGTGGAAAGCTaGCTTGAGATTGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLCSVES*LEIAMC
Trigger: GCACATGGCAATCTCAAGGCAGCTTTCCACGGAGCA...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGTCTTGCAGAACAGCCTaGTCCGTGGAAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWSCRTA*SVESCL
Trigger: AAGGCAGCTTTCCACGGAGCAGGCTGTTCTGCAAGA...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTTCTCCAGCGACTCTTaGAGAACAGCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPFSSDS*RTACSV
Trigger: CACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCCTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSLIYLL*PRSSLG
Trigger: CCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAG...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGCTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWLIYLL*PRSSLG
Trigger: CCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAG...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCCAGTCTCAGAAGCTaGGATTCCGCCGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHSSLRS*DSAGGD
Trigger: GTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGA...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAAGAAGCGGACCATTCTaGTACTTTCCCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIRSGPF*YFPKDK
Trigger: TTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCT...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAGATGGCTCAACACTCTaGCCCTCAACTGCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRDGSTL*PSTASR
Trigger: CCTAGAAGCAGTTGAGGGCCAGAGTGTTGAGCCATC...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATGGGAAGATGTCCAAGTaGAATAGGATAAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDGKMSK*NRIKKM
Trigger: CATCTTCTTTATCCTATTCCACTTGGACATCTTCCC...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGTAATGCAGAATCATTaGGGACTTCCATGCCATCAG +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGVMQNH*GLPCHQ
Trigger: CTGATGGCATGGAAGTCCCCAATGATTCTGCATTAC...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGAGTGACTTTATGCTCTaGGTTCAGCACTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPSDFML*VQHLSF
Trigger: GAAGCTCAAGTGCTGAACCCAGAGCATAAAGTCACT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCCAAATCCTTTCCTTTaGAGACCATTTGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHPNPFL*RPFVCL
Trigger: AAGACACACAAATGGTCTCCAAAGGAAAGGATTTGG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAAAAAGGTTACTTTTGTaGGTTCTAGGACTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPKRLLL*VLGLVL
Trigger: CAACACCAGTCCTAGAACCCACAAAAGTAACCTTTT...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGTATTCCTACCTGAGGTaGTCGTTGTTTTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPYSYLR*SLFLKQ
Trigger: CTGCTTCAAAAACAACGACCACCTCAGGTAGGAATA...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAAGTGAACATGAGCCCTaGATACCAAAGGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADISEHEP*IPKASN
Trigger: ATTTGAAGCCTTTGGTATCCAGGGCTCATGTTCACT...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGAGTGAACATGAGCCCTaGATACCAAAGGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPSEHEP*IPKASN
Trigger: ATTTGAAGCCTTTGGTATCCAGGGCTCATGTTCACT...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACTCAAGTTTCTCTGAGTaGCTAGCTTCAATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHSSFSE*LASISN
Trigger: GTTGGAAATTGAAGCTAGCCACTCAGAGAAACTTGA...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTTCAAGTTTCTCTGAGTaGCTAGCTTCAATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDASSFSE*LASISN
Trigger: GTTGGAAATTGAAGCTAGCCACTCAGAGAAACTTGA...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCATCTTCATTCTCCTGCTaGAAACGCTTCAATTTGTCA +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPSSFSC*KRFNLS
Trigger: TGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGA...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGGAACAGCCTGCTCCGTaGAAAGCTGCCTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWEQPAP*KAALRL
Trigger: CAATCTCAAGGCAGCTTTCCACGGAGCAGGCTGTTC...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCGAACAGCCTGCTCCGTaGAAAGCTGCCTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSEQPAP*KAALRL
Trigger: CAATCTCAAGGCAGCTTTCCACGGAGCAGGCTGTTC...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGGTGACTGCAAAGGGATaGCGGAGGATGTGGGGGATC +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGVTAKG*RRMWGI
Trigger: GATCCCCCACATCCTCCGCCATCCCTTTGCAGTCAC...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGAGAGTCTGTGGACTTTaGGGAGGTGTCATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWRVCGL*GGVIWV
Trigger: CACCCAGATGACACCTCCCCAAAGTCCACAGACTCT...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATACTGGCTCTGGGGCTCTaGAAAATCATATTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADILALGL*KIIFLY
Trigger: ATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAG...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTCAATTCCTTTTAAATaGGAGGGTGGGCAAAATGGT +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRSIPFK*EGGQNG
Trigger: ACCATTTTGCCCACCCTCTCATTTAAAAGGAATTGA...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGAAGAACATGCACACTaGTTTCCAATATCTGAAACA +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPEEHAH*FPISET
Trigger: TGTTTCAGATATTGGAAATCAGTGTGCATGTTCTTC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAATCAATTCTGAGGTATaGTTTTGGGTTCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIINSEV*FWVPKS
Trigger: GGATTTGGGAACCCAAAATCATACCTCAGAATTGAT...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCCAAGTCAGTCCAAATaGCGAGCCCACCTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKPSQSK*RAHLLS
Trigger: GGACAAAAGGTGGGCTCGTCATTTGGACTGACTTGG...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGGCTGAGGTCTGGGCGTaGCCTTTGATAAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKAEVWA*PLIKQH
Trigger: ATGCTGCTTTATCAAAGGTCACGCCCAGACCTCAGC...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTCTTGGAACCCTGTGTaGAGCATTTTTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRSWNPV*SIFRMS
Trigger: ACTCATTCTAAAAATGCTTCACACAGGGTTCCAAGA...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATATCTTGGAACCCTGTGTaGAGCATTTTTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADISWNPV*SIFRMS
Trigger: ACTCATTCTAAAAATGCTTCACACAGGGTTCCAAGA...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGTCTTGGAACCCTGTGTaGAGCATTTTTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPSWNPV*SIFRMS
Trigger: ACTCATTCTAAAAATGCTTCACACAGGGTTCCAAGA...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCAGGGAGTATGCCTTTaGTCTTCTGAAACAACGCAG +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWQGVCL*SSETTQ
Trigger: CTGCGTTGTTTCAGAAGATCAAAGGCATACTCCCTG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGTCAGACAGCAGGTGCTaGATCACAACTGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLSDSRC*ITTVNA
Trigger: GGCATTGACAGTTGTGATTCAGCACCTGCTGTCTGA...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGCACTCTTCAGATCATTaGTTTGCTTCTCTAGCGATT +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPHSSDH*FASLAI
Trigger: AATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTG...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGGCAGTTTCTCATTCTTaGTCTCTAACACAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRAVSHS*SLTQLS
Trigger: TGAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGC...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAAACTTGATGTCCTGTTaGTGCAGTTTCTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADINLMSC*CSFSFL
Trigger: CAAGAATGAGAAACTGCATCAACAGGACATCAAGTT...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCATTTTCATTAACTTaGTGTCCTGTTGATGCAGTT +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAPFSLT*CPVDAV
Trigger: AACTGCATCAACAGGACATCAAGTTAATGAAAATGG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCGTGGAAAGCTGCCTTaGGATTGCCATGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKRGKLP*DCHVLV
Trigger: GACAAGCACATGGCAATCTCAAGGCAGCTTTCCACG...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACGTGGAAAGCTGCCTTaGGATTGCCATGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKRGKLP*DCHVLV
Trigger: GACAAGCACATGGCAATCTCAAGGCAGCTTTCCACG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGTTTTGTGTTGTTTCAGTGCTTCCTCCCGCTCAGACAGCAGGTGCTGAATCACATCTTAATAGGGCCCTaGGAGTTTTTCCCCCTATGC +
Preference number: 4 (lower is better)
Translates to: GFVLFQCFLPLRQQVLNHILIGP*EFFPLC
Trigger: GCATAGGGGGAAAAACTCTCAGGGCCCTATTAAGAT...GTGATTCAGCACCTGCTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTTCACCTCTAGCATCCTaGATCTCTTCTTACTACAGC +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGSPLAS*ISSYYS
Trigger: GCTGTAGTAAGAAGAGATTCAGGATGCTAGAGGTGA...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCACCATGCCTAGGGGATaGATGGCAAACCCAACTTTG +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSTMPRG*MANPTL
Trigger: CAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGT...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGAATTCCAGTTCACACTaGTGGCTGAAGAGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPNSSSH*WLKSFV
Trigger: CACAAAACTCTTCAGCCAGCAGTGTGAACTGGAATT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR GCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACAATGACCATATCATTTaGATCCCAAGTCAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHNDHII*IPSQSK
Trigger: TTTGGACTGACTTGGGATGCAAATGATATGGTCATT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGACACAGGTTCACAGGTaGCTCCTTCGAGTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLTQVHR*LLRVWY
Trigger: ATACCAGACTCGAAGGAGGCACCTGTGAACCTGTGT...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GGTTTTGGAGGTTTCTCCTCATATTTGATGACAGCGGCATTACCAGAATTGTTGTGGCTATTGAGGGGGTaGTTCCTGTCCTCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GFGGFSSYLMTAALPELLWLLRG*FLSSAA
Trigger: CGCTGCGGAGGACAGGAAGCACCCCCTCAATAGCCA...CAACAATTCTGGTAATGCCGCTGTCATCAAATATGAGGAGAAACCTCCAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR GCA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTAATCACAACTGTCAATaGCTCAAACTTGGTATTACC +
Preference number: 4 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDANHNCQ*LKLGIT
Trigger: GGTAATACCAAGTTTGAGGCATTGACAGTTGTGATT...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGTTTGTGTTGTTTCAGTaGTTCCTCCCGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWFVLFQ*FLPLRQ
Trigger: CTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAA...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCATTCTCTAGCGATTCCTaGTTCTCAGAAAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPFSSDS*FSESKS
Trigger: AGATTTACTTTCTGAGAAGCAGGAATCGCTAGAGAA...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATATTCAGATCATTGATTTaGTTCTCTAGCGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIFRSLI*FSSDSC
Trigger: GCAGGAATCGCTAGAGAAGCAAATCAATGATCTGAA...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACAATTCTTCATTCTCCTaGTGGAAACGCTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHNSSFS*WKRFNL
Trigger: CAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCACAGAAGCTCCTCGTTTTCCATAGAGAGTCGCTTGTTGACTTTCGACTCCTTTCTTGCAGAACAGCCTaGTCCGTGGAAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PQKLLVFHRESLVDFRLLSCRTA*SVESCL
Trigger: AAGGCAGCTTTCCACGGAGCAGGCTGTTCTGCAAGA...AAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGAAAACGAGGAGCTTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR GCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAGAATTCCTTGGTGACTaGAAAGGGATGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLREFLGD*KGMAED
Trigger: ATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTC...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTTCAGTCCTGCAGACCTaGATCAAAATGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGSVLQT*IKMLSE
Trigger: CTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGA...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTAGAAGCGGACCATTCTaGTACTTTCCCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGRSGPF*YFPKDK
Trigger: TTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCT...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGGCTATGAGATTTATTTaGCGGTCACGTAATACGGAG +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPAMRFI*RSRNTE
Trigger: CTCCGTATTACGTGACCGGCAAATAAATCTCATAGC...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAATACAATCTCCCTCCTaGAGGTCTAGAAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRIQSPS*RSRSCL
Trigger: GAGGCAGCTTCTAGACCTGCAGGAGGGAGATTGTAT...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR CCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAAATGTGGTTCGCTATTaGATTCATCATGGGATAAAC +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPNVVRY*IHHGIN
Trigger: GTTTATCCCATGATGAATCCAATAGCGAACCACATT...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGGTCTCTCTCAGATTTTaGCCCATTTCCTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWVSLRF*PISLCL
Trigger: CAGGCACAAGGAAATGGGCCAAAATCTGAGAGAGAC...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAGTCTCTCTCAGATTTTaGCCCATTTCCTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGVSLRF*PISLCL
Trigger: CAGGCACAAGGAAATGGGCCAAAATCTGAGAGAGAC...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCGGCTCGATCAGCACTaGGATTTCTATTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWRLDQH*DFYCHC
Trigger: ACAGTGACAATAGAAATCCCAGTGCTGATCGAGCCG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GGAAACGCTTCAATTTGTCAACCAATGCTGTGTTGTTGTCCACCAGTTTCTCCAGCTCACTGTGGGTGCTaGCTATTGAGGGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GNASICQPMLCCCPPVSPAHCGC*LLRGCF
Trigger: GAAGCACCCCCTCAATAGCCAGCACCCACAGTGAGC...TGGAGAAACTGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGTCTCGAAGGACCTTTTaGAGGAGTTTTCATCAAGTG +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPSRRTF*RSFHQV
Trigger: CACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGA...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCTCAGCCTGGTGCTGCTaGACGAATGCTTCATACACT +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSSAWCC*TNASYT
Trigger: AGTGTATGAAGCATTCGTCCAGCAGCACCAGGCTGA...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGTCAGCCTGGTGCTGCTaGACGAATGCTTCATACACT +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLSAWCC*TNASYT
Trigger: AGTGTATGAAGCATTCGTCCAGCAGCACCAGGCTGA...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGAGAGTCTGTGGACTTTaGGGAGGTGTCATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKRVCGL*GGVIWV
Trigger: CACCCAGATGACACCTCCCCAAAGTCCACAGACTCT...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGTTTTGGAGGTTTCTCCTCATATTTGATGACAGCGGCATTACCAGAATTGTTGGCCCACGTTCCTCCTTaGGGTCAGTCCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: GFGGFSSYLMTAALPELLAHVPP*GQSCRP
Trigger: AGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGC...CAACAATTCTGGTAATGCCGCTGTCATCAAATATGAGGAGAAACCTCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAAACCTGGAGGAGAGTTaGACAAGCCACATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGNLEES*TSHIFH
Trigger: GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTT...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATATCATTGAGAACAACTTaGAAGCGTGAGCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADISLRTT*KREQRY
Trigger: ATATCTCTGCTCACGCTTCCAAGTTGTTCTCAATGA...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGATGCCTAGGGGATGAATaGCAAACCCAACTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGCLGDE*QTQLWL
Trigger: TAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCA...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CAGCATCCTTTCAACTTCATACTCACTACTCACAAACCAACCCTTGGAAGTACACAAGAAGCATACAGGTaGCCGCGCCACCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: QHPFNFILTTHKPTLGSTQEAYR*PRHPPV
Trigger: GACTGGTGGGTGGCGCGGCCACCTGTATGCTTCTTG...TGTACTTCCAAGGGTTGGTTTGTGAGTAGTGAGTATGAAGTTGAAAGGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519066.5
3UTR CAA 72 bp TGCTCCGTGGAAAGCTGCCTTGAGATTGCCATGTGCTaGTCCATCCGAGCTTTCAATTCTTCATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CSVESCLEIAMC*SIRAFNSSFSC
Trigger: GCAGGAGAATGAAGAATTGAAAGCTCGGATGGACAAGCACATGGCAATCTCAAGGCAGCTTTCCACGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
3UTR CAA 72 bp TTCCACAGAAGCTCCTCGTTTTCCATAGAGAGTCGCTaGTTGACTTTCGACTCCTTCTCCAGCGACTCTTGC +
Preference number: 4 (lower is better)
Translates to: FHRSSSFSIESR*LTFDSFSSDSC
Trigger: GCAAGAGTCGCTGGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGAAAACGAGGAGCTTCTGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCTCTTTCCGATGGCATaGTGTGATATAAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWLFPMA*CDIKVQ
Trigger: CTGCACCTTTATATCACATCATGCCATCGGAAAGAG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCATGTCTTGGGCTTCTaGTGGTGTGACTTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKHVLGF*WCDLRV
Trigger: AACCCTCAAGTCACACCATCAGAAGCCCAAGACATG...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp GGTTTTGTGTTGTTTCAGTGCTTCCTCCCGCTCAGACAGCAGGTGCTGAATCACTCTGGGTTCAGCACTTaGGCTTCGCTCTTATCAAAA +
Preference number: 4 (lower is better)
Translates to: GFVLFQCFLPLRQQVLNHSGFST*ASLLSK
Trigger: TTTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGA...GTGATTCAGCACCTGCTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCCAAGTCAGTCCAAATaGCGAGCCCACCTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILPSQSK*RAHLLS
Trigger: GGACAAAAGGTGGGCTCGTCATTTGGACTGACTTGG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGAAGCATTTTTAGAATaGGTTGTAACATGCACAGCC +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGEAFLE*VVTCTA
Trigger: GGCTGTGCATGTTACAACTCATTCTAAAAATGCTTC...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACCCCGGTCTCGCATGCTaGGTTAGAAGAACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHPGLAC*VRRTGF
Trigger: AAAGCCAGTTCTTCTAACTCAGCATGCGAGACCGGG...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCGGTGGTCGTTGTTTTTaGAGCAGAGCCCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSGGRCF*SRAQKQ
Trigger: CTGTTTTTGGGCTCTGCTTCAAAAACAACGACCACC...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCTCAGACAGCAGGTGCTaGATCACAACTGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFSDSRC*ITTVNA
Trigger: GGCATTGACAGTTGTGATTCAGCACCTGCTGTCTGA...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCAATTCAAGTTTCTCTaGGTGGCTAGCTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPQFKFL*VASFNF
Trigger: GAAATTGAAGCTAGCCACTCAGAGAAACTTGAATTG...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCACTCTTCAGATCATTaGTTTGCTTCTCTAGCGATT +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPHSSDH*FASLAI
Trigger: AATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTG...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGGCAGTTTCTCATTCTTaGTCTCTAACACAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPAVSHS*SLTQLS
Trigger: TGAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGC...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGCAGTTTCTCATTCTTaGTCTCTAACACAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGAVSHS*SLTQLS
Trigger: TGAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGC...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGAACTTGATGTCCTGTTaGTGCAGTTTCTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPNLMSC*CSFSFL
Trigger: CAAGAATGAGAAACTGCATCAACAGGACATCAAGTT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAACGTGGAAAGCTGCCTTaGGATTGCCATGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKRGKLP*DCHVLV
Trigger: GACAAGCACATGGCAATCTCAAGGCAGCTTTCCACG...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCATCTTAATAGGGCCCTaGGAGTTTTTCCCCCTATGC +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSILIGP*EFFPLC
Trigger: GCATAGGGGGAAAAACTCTCAGGGCCCTATTAAGAT...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGAGAAGGTGTCTGTGGTaGAGAACATTACAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPRRCLW*RTLQRL
Trigger: TAACCTTTGTAATGTTCTTCACCACAGACACCTTCT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAGCTGCATCAGACACATaGCACTCTGTGACATCCATT +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRAASDT*HSVTSI
Trigger: AATGGATGTCACAGAGTGTCATGTGTCTGATGCAGC...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGAATTATACTAGCCAATaGCTTCCTTGTTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRNYTSQ*LPCSRS
Trigger: AGAACGAGAACAAGGAAGTCATTGGCTAGTATAATT...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAAATTATACTAGCCAATaGCTTCCTTGTTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADINYTSQ*LPCSRS
Trigger: AGAACGAGAACAAGGAAGTCATTGGCTAGTATAATT...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGATCATCGGTAAGCACTaGATCCTACCTTTCTTAATT +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPIIGKH*ILPFLI
Trigger: AATTAAGAAAGGTAGGATTCAGTGCTTACCGATGAT...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGATGATGCTCTTCCTCTaGATACAATCTCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLMMLFL*IQSPSC
Trigger: GCAGGAGGGAGATTGTATTCAGAGGAAGAGCATCAT...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR GCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGGTAGTTTCTCTTGCATaGGTCTTATCAGAATGGGAA +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPVVSLA*VLSEWE
Trigger: TTCCCATTCTGATAAGACGCATGCAAGAGAAACTAC...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR GCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAAATGACCATATCATTTaGATCCCAAGTCAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADINDHII*IPSQSK
Trigger: TTTGGACTGACTTGGGATGCAAATGATATGGTCATT...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAGCAGCATCTTTGGGCTaGAACACTGCTCTAGACATA +
Preference number: 4 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPAASLG*NTALDI
Trigger: TATGTCTAGAGCAGTGTTGCAGCCCAAAGATGCTGC...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCATTTGGAGCAGCTATTTaGCTCAAACCGCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPFGAAI*LKPQES
Trigger: TGACTCCTGCGGTTTGAGGCAAATAGCTGCTCCAAA...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCCCACAGGCAAGAAGCTaGTTGAGCTGCAGGATAAAT +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSPQARS*LSCRIN
Trigger: ATTTATCCTGCAGCTCAAGCAGCTTCTTGCCTGTGG...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGAATCACAACTGTCAATaGCTCAAACTTGGTATTACC +
Preference number: 4 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRNHNCQ*LKLGIT
Trigger: GGTAATACCAAGTTTGAGGCATTGACAGTTGTGATT...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGAATCACAACTGTCAATaGCTCAAACTTGGTATTACC +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPNHNCQ*LKLGIT
Trigger: GGTAATACCAAGTTTGAGGCATTGACAGTTGTGATT...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGTTTGTGTTGTTTCAGTaGTTCCTCCCGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLFVLFQ*FLPLRQ
Trigger: CTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAA...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGATTTTCAGCCTGGTGCTaGTGGACGAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRFSAWC*WTNASY
Trigger: GTATGAAGCATTCGTCCAGCAGCACCAGGCTGAAAA...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGTTTTCAGCCTGGTGCTaGTGGACGAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLFSAWC*WTNASY
Trigger: GTATGAAGCATTCGTCCAGCAGCACCAGGCTGAAAA...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGTTTTCAGCCTGGTGCTaGTGGACGAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWFSAWC*WTNASY
Trigger: GTATGAAGCATTCGTCCAGCAGCACCAGGCTGAAAA...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCATTTTGTACTTCTCTaGTTCTTCAATGTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDHFVLL*FFNVSV
Trigger: GACACTTACATTGAAGAAGCAGAGAAGTACAAAATG...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACATTTTGTACTTCTCTaGTTCTTCAATGTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPHFVLL*FFNVSV
Trigger: GACACTTACATTGAAGAAGCAGAGAAGTACAAAATG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAAACTGCTCTTGCAATTaGATTTTGTACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADINCSCN*ILYFSA
Trigger: AGCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTT...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGAACTTAGAGGTTTCATaGGCAGCATTTAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPNLEVS*AAFKLS
Trigger: TGACAACTTAAATGCTGCGCATGAAACCTCTAAGTT...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTCAATTTGTCAACCAATaGTGTGTTGTTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGQFVNQ*CVVVHQ
Trigger: CTGGTGGACAACAACACAGCATTGGTTGACAAATTG...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGACTTGAGATTGCCATGTaGTTGTCCATCCGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRLEIAM*LSIRAF
Trigger: GAAAGCTCGGATGGACAAGCACATGGCAATCTCAAG...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTTGCTCCGTGGAAAGCTaGCTTGAGATTGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILCSVES*LEIAMC
Trigger: GCACATGGCAATCTCAAGGCAGCTTTCCACGGAGCA...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAATGCTCCGTGGAAAGCTaGCTTGAGATTGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKCSVES*LEIAMC
Trigger: GCACATGGCAATCTCAAGGCAGCTTTCCACGGAGCA...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAAACGCTTCAATTTGTCAACCAATGCTGTGTTGTTGTCCACCAGTTTCTCCATTCTCCAGCGACTCTTaGAGAACAGCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: GNASICQPMLCCCPPVSPFSSDS*RTACSV
Trigger: CACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAA...TGGAGAAACTGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR GCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGGAATTCCTTGGTGACTaGAAAGGGATGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKEFLGD*KGMAED
Trigger: ATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTC...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGTCAGTCCTGCAGACCTaGATCAAAATGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWSVLQT*IKMLSE
Trigger: CTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGA...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCTGATATACCTCTTGTaGCCACGTTCCTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILLIYLL*PRSSLG
Trigger: CCCCAAGGAGGAACGTGGGCACAAGAGGTATATCAG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCACAGCAGAGGAGGCTaGATCAGACACATGACACTC +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILHSRGG*IRHMTL
Trigger: GAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGCACAGCAGAGGAGGCTaGATCAGACACATGACACTC +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGHSRGG*IRHMTL
Trigger: GAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTG...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGATGCCTCCTTCGAGTCTaGTATGTTTTTAAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRCLLRV*YVFKPS
Trigger: CGAGGGCTTAAAAACATACCAGACTCGAAGGAGGCA...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAGTAACATGCACAGCCTaGCTAGTAATGAGTTTATTA +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIVTCTA*LVMSLL
Trigger: TAATAAACTCATTACTAGCCAGGCTGTGCATGTTAC...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGACGGCTCGATCAGCACTaGGATTTCTATTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRRLDQH*DFYCHC
Trigger: ACAGTGACAATAGAAATCCCAGTGCTGATCGAGCCG...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATACTGAAATGCTGGTTTTaGAGGTTTCTCCTCATATTT +
Preference number: 4 (lower is better)
Translates to: PPVVTLQLPYGDHTCADILKCWF*RFLLIF
Trigger: AAATATGAGGAGAAACCTCCAAAACCAGCATTTCAG...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGTCAGCCTGGTGCTGCTaGACGAATGCTTCATACACT +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKSAWCC*TNASYT
Trigger: AGTGTATGAAGCATTCGTCCAGCAGCACCAGGCTGA...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGTCAAGTTTCTCTGAGTaGCTAGCTTCAATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPSSFSE*LASISN
Trigger: GTTGGAAATTGAAGCTAGCCACTCAGAGAAACTTGA...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGTCTTCATTCTCCTGCTaGAAACGCTTCAATTTGTCA +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPSSFSC*KRFNLS
Trigger: TGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGA...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTTCTTCATTCTCCTGCTaGAAACGCTTCAATTTGTCA +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGSSFSC*KRFNLS
Trigger: TGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGA...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGGAACAGCCTGCTCCGTaGAAAGCTGCCTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGEQPAP*KAALRL
Trigger: CAATCTCAAGGCAGCTTTCCACGGAGCAGGCTGTTC...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGAACCTGGAGGAGAGTTaGACAAGCCACATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWNLEES*TSHIFH
Trigger: GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTT...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAACCTGGAGGAGAGTTaGACAAGCCACATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRNLEES*TSHIFH
Trigger: GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTT...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATTATCAGAAGCAAACATaGAAGGTTACATACATGATG +
Preference number: 4 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDYQKQT*KVTYMM
Trigger: CATCATGTATGTAACCTTCCATGTTTGCTTCTGATA...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGTGCCTAGGGGATGAATaGCAAACCCAACTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLCLGDE*QTQLWL
Trigger: TAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCA...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAAAAATCCCCCAGGGCTaGCCAAGTGTTTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKKIPQG*PSVSGF
Trigger: GAAGCCAGAAACACTTGGCCAGCCCTGGGGGATTTT...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
49% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGACTGCGAAATCCTCCTaGTACAGTCATTTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPTAKSS*YSHLKG
Trigger: TCCTTTTAAATGACTGTACCAGGAGGATTTCGCAGT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381861.7
3UTR CAA 72 bp CCTGTCCTCCGCAGCGCAGGACTTTTCAAAGATGCTTaGGATTTAGGAAGTGGTCTAGGCAAATTCACCCAT +
Preference number: 4 (lower is better)
Translates to: PVLRSAGLFKDA*DLGSGLGKFTH
Trigger: ATGGGTGAATTTGCCTAGACCACTTCCTAAATCCAAAGCATCTTTGAAAAGTCCTGCGCTGCGGAGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTACAAGTGCAGGACACTaGCAAATAGAATCTTTATGC +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGTSAGH*QIESLC
Trigger: GCATAAAGATTCTATTTGTCAGTGTCCTGCACTTGT...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR TCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAACATGTCTTGGGCTTCTaGTGGTGTGACTTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKHVLGF*WCDLRV
Trigger: AACCCTCAAGTCACACCATCAGAAGCCCAAGACATG...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR TCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTATCAATTCTGAGGTATaGTTTTGGGTTCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGINSEV*FWVPKS
Trigger: GGATTTGGGAACCCAAAATCATACCTCAGAATTGAT...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGTTTTGTGTTGTTTCAGTGCTTCCTCCCGCTCAGACAGCAGGTGCTGAATCACTTGTCAACATCTTCCTaGTTCGATTTCACGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GFVLFQCFLPLRQQVLNHLSTSS*FDFTAD
Trigger: ATCTGCCGTGAAATCGAATCAGGAAGATGTTGACAA...GTGATTCAGCACCTGCTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGATGCCTTTGATCTTCTaGAACAACGCAGAAACGGAC +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLMPLIF*NNAETD
Trigger: GTCCGTTTCTGCGTTGTTTCAGAAGATCAAAGGCAT...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGGCAAATTCACCCATaGCGACTGTGCAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRRQIHP*RLCSFQ
Trigger: TTGAAAACTGCACAGTCGTCATGGGTGAATTTGCCT...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR TCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTCAAATAAAAGGATCCTaGGGAACCATTCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGQIKGS*GTILKC
Trigger: GCATTTCAGAATGGTTCCTCAGGATCCTTTTATTTG...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCAGACAGCAGGTGCTaGATCACAACTGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHSDSRC*ITTVNA
Trigger: GGCATTGACAGTTGTGATTCAGCACCTGCTGTCTGA...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGGCCTTTCTTAATTTCTaGAAGGGAGGCTTCATAGGC +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLAFLNF*KGGFIG
Trigger: GCCTATGAAGCCTCCCTTTCAGAAATTAAGAAAGGC...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CTCTGCTTCTTCAATGTAAGTGTCCCGAAGCTTTTCATACTCCCTGGTGTAAAAGAGGTGTCATCTGGGTaGAATGCTGGGGCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: LCFFNVSVPKLFILPGVKEVSSG*NAGARE
Trigger: TTCCCTAGCCCCAGCATTTCACCCAGATGACACCTC...TTTTACACCAGGGAGTATGAAAAGCTTCGGGACACTTACATTGAAGAAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCTCACCTCTAGCATCCTaGATCTCTTCTTACTACAGC +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSSPLAS*ISSYYS
Trigger: GCTGTAGTAAGAAGAGATTCAGGATGCTAGAGGTGA...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGACCATGCCTAGGGGATaGATGGCAAACCCAACTTTG +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGTMPRG*MANPTL
Trigger: CAAAGTTGGGTTTGCCATTCATCCCCTAGGCATGGT...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGCCCATCACTACAAACTaGGCACAACTACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWPITTN*AQLQLS
Trigger: AGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGG...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGGGCATCACAGTAGCCTaGACAGTTCAAATTGTCATT +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWGITVA*TVQIVI
Trigger: AATGACAATTTGAACTGTGCAGGCTACTGTGATGCC...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR GCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCGGACTGGTGTTGACATaGACATCGTTTTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFGLVLT*TSFCLC
Trigger: GCACAGACAAAACGATGTGCATGTCAACACCAGTCC...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCTTCGAGGATTCTTTTaGCTGCTCTTTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWLRGFF*LLFSTA
Trigger: TGCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGAAGCTGCTTGAGCTaGAGGATAAATCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRRSCLS*RINPLW
Trigger: CCAAAGTGGATTTATCCTGCAGCTCAAGCAGCTTCT...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGAGAAGCTGCTTGAGCTaGAGGATAAATCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWRSCLS*RINPLW
Trigger: CCAAAGTGGATTTATCCTGCAGCTCAAGCAGCTTCT...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGAATCACAACTGTCAATaGCTCAAACTTGGTATTACC +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPNHNCQ*LKLGIT
Trigger: GGTAATACCAAGTTTGAGGCATTGACAGTTGTGATT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGTTTGTGTTGTTTCAGTaGTTCCTCCCGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKFVLFQ*FLPLRQ
Trigger: CTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAA...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTTTGTGTTGTTTCAGTaGTTCCTCCCGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPFVLFQ*FLPLRQ
Trigger: CTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGCATTTTGTACTTCTCTaGTTCTTCAATGTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPHFVLL*FFNVSV
Trigger: GACACTTACATTGAAGAAGCAGAGAAGTACAAAATG...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTAACTGCTCTTGCAATTaGATTTTGTACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGNCSCN*ILYFSA
Trigger: AGCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTT...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTTTCTCTAGCGATTCCTaGTTCTCAGAAAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGFSSDS*FSESKS
Trigger: AGATTTACTTTCTGAGAAGCAGGAATCGCTAGAGAA...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTTTCAGATCATTGATTTaGTTCTCTAGCGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGFRSLI*FSSDSC
Trigger: GCAGGAATCGCTAGAGAAGCAAATCAATGATCTGAA...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGAATTCTTCATTCTCCTaGTGGAAACGCTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPNSSFS*WKRFNL
Trigger: CAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACTTGAGATTGCCATGTaGTTGTCCATCCGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKLEIAM*LSIRAF
Trigger: GAAAGCTCGGATGGACAAGCACATGGCAATCTCAAG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAAGACCTGCATCAAAATaGTTTCAGAGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGRPASK*FQRVCG
Trigger: TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCT...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGTCAGTCCTGCAGACCTaGATCAAAATGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWSVLQT*IKMLSE
Trigger: CTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGA...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGATCAGTCCTGCAGACCTaGATCAAAATGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRSVLQT*IKMLSE
Trigger: CTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGA...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGTCCAGTCTCAGAAGCTaGGATTCCGCCGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKSSLRS*DSAGGD
Trigger: GTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGA...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGATCTTTAAGTGCTTTGTaGAACAACGTCCGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGSLSAL*NNVRVD
Trigger: ATCGACACGGACGTTGTTGCACAAAGCACTTAAAGA...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCCACAATGTTGACACATaGAGGGAGGGGGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFHNVDT*REGEIK
Trigger: CTTTATCTCCCCCTCCCTGCATGTGTCAACATTGTG...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGGCTATGAGATTTATTTaGCGGTCACGTAATACGGAG +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWAMRFI*RSRNTE
Trigger: CTCCGTATTACGTGACCGGCAAATAAATCTCATAGC...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCCAGTTTCTGTACAACTaGGAAATCCTCCTGGTACAG +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSQFLYN*EILLVQ
Trigger: CTGTACCAGGAGGATTTCGCAGTTGTACAGAAACTG...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381861.7
CDS-3UTR GCA 90 bp TCATGGACAGCATCCTTTCAACTTCATACTCACTACTCACAAACCAACCCTTGGCTCCCGCCTTGTTGCTaGACATGGAGAATAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SWTASFQLHTHYSQTNPWLPPCC*TWRIEA
Trigger: TGCCTCTATTCTCCATGTGCAGCAACAAGGCGGGAG...CCAAGGGTTGGTTTGTGAGTAGTGAGTATGAAGTTGAAAGGATGCTGTCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR GCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCGAGTTCCCTCTTACATaGAAGCCTGATTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSEFPLT*KPDFVP
Trigger: TGGCACAAAATCAGGCTTGCATGTAAGAGGGAACTC...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544260.3
CDS-3UTR CCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCCCATGTCATCTGGGTTaGCAGAATTCCAGTTCACAC +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFPCHLG*QNSSSH
Trigger: GTGTGAACTGGAATTCTGCCAACCCAGATGACATGG...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR CCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAACACAAAAGGCAAAGATaGCTCAACACTCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKHKRQR*LNTLAL
Trigger: GAGGGCCAGAGTGTTGAGCCATCTTTGCCTTTTGTG...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR CCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGTGACTTTATGCTCTaGGTTCAGCACTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRSDFML*VQHLSF
Trigger: GAAGCTCAAGTGCTGAACCCAGAGCATAAAGTCACT...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGCCTCCTTCGAGTCTaGTATGTTTTTAAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPCLLRV*YVFKPS
Trigger: CGAGGGCTTAAAAACATACCAGACTCGAAGGAGGCA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGAACTTTGCAGCCTATTaGGGTATTCGTTTTGATTGT +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPNFAAY*GIRFDC
Trigger: ACAATCAAAACGAATACCCCAATAGGCTGCAAAGTT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCGCAGGAGTCAGGCTTaGATATATTCCTACCTGAGG +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILRRSQA*IYSYLR
Trigger: CCTCAGGTAGGAATATATCCAAGCCTGACTCCTGCG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCTGAAATGCTGGTTTTaGAGGTTTCTCCTCATATTT +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPLKCWF*RFLLIF
Trigger: AAATATGAGGAGAAACCTCCAAAACCAGCATTTCAG...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACCATTCTGAAATGCTaGTTTTGGAGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWTILKC*FWRFLL
Trigger: GAGGAGAAACCTCCAAAACCAGCATTTCAGAATGGT...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAAGTGAACATGAGCCCTaGATACCAAAGGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGSEHEP*IPKASN
Trigger: ATTTGAAGCCTTTGGTATCCAGGGCTCATGTTCACT...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTTCAAGTTTCTCTGAGTaGCTAGCTTCAATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGSSFSE*LASISN
Trigger: GTTGGAAATTGAAGCTAGCCACTCAGAGAAACTTGA...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCTTTCAGAGAGTCTGTaGACTTTGGGGAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPLSESL*TLGRCH
Trigger: ATGACACCTCCCCAAAGTCCACAGACTCTCTGAAAG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTTTCAGAGAGTCTGTaGACTTTGGGGAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKLSESL*TLGRCH
Trigger: ATGACACCTCCCCAAAGTCCACAGACTCTCTGAAAG...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAGAAGGTTTGCTTTTGTaGCTCTGGATGGTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPEGLLL*LWMVEK
Trigger: TTTCTCCACCATCCAGAGCCACAAAAGCAAACCTTC...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAGAAGGTTTGCTTTTGTaGCTCTGGATGGTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLREGLLL*LWMVEK
Trigger: TTTCTCCACCATCCAGAGCCACAAAAGCAAACCTTC...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGAAGATGAGCTGGCTCTaGGGCTCTGGAAAATCATAT +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLKMSWL*GSGKSY
Trigger: ATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTT...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCCACATTTTCCACTCATaGGAAAGAAGCGGACCATTC +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSHIFHS*ERSGPF
Trigger: GAATGGTCCGCTTCTTTCCCATGAGTGGAAAATGTG...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGCACATTTTCCACTCATaGGAAAGAAGCGGACCATTC +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWHIFHS*ERSGPF
Trigger: GAATGGTCCGCTTCTTTCCCATGAGTGGAAAATGTG...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGTGCCTAGGGGATGAATaGCAAACCCAACTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKCLGDE*QTQLWL
Trigger: TAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCA...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGATCAATTCCTTTTAAATaGGAGGGTGGGCAAAATGGT +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGSIPFK*EGGQNG
Trigger: ACCATTTTGCCCACCCTCTCATTTAAAAGGAATTGA...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGACTGCTTCTAGGGAATaGCAACTGTGTTGCAGATAT +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLTASRE*QLCCRY
Trigger: ATATCTGCAACACAGTTGTCATTCCCTAGAAGCAGT...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGATCCGATGGCATGATGTaGTATAAAGGTGCAGTTAAC +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRSDGMM*YKGAVN
Trigger: GTTAACTGCACCTTTATATCACATCATGCCATCGGA...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGATCTGATGGTGTGACTTaGGGGTTTTCAAAGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRSDGVT*GFSKLS
Trigger: AGAAAGCTTTGAAAACCCTCAAGTCACACCATCAGA...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGATCAATTCTGAGGTATaGTTTTGGGTTCCCAAATCC +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWINSEV*FWVPKS
Trigger: GGATTTGGGAACCCAAAATCATACCTCAGAATTGAT...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAGAAGCATTTTTAGAATaGGTTGTAACATGCACAGCC +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGEAFLE*VVTCTA
Trigger: GGCTGTGCATGTTACAACTCATTCTAAAAATGCTTC...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACCAGGGAGTATGCCTTTaGTCTTCTGAAACAACGCAG +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHQGVCL*SSETTQ
Trigger: CTGCGTTGTTTCAGAAGATCAAAGGCATACTCCCTG...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAGGTGGTCGTTGTTTTTaGAGCAGAGCCCAAAAACAG +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKGGRCF*SRAQKQ
Trigger: CTGTTTTTGGGCTCTGCTTCAAAAACAACGACCACC...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGACACGCCTGATCCTCTaGGGAGATACGGCTCGATCA +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKTRLIL*GDTARS
Trigger: TGATCGAGCCGTATCTCCTCAGAGGATCAGGCGTGT...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGAACTGGACACACGCCTaGTCCTCTGAGGAGATACGG +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKNWTHA*SSEEIR
Trigger: CCGTATCTCCTCAGAGGATCAGGCGTGTGTCCAGTT...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTGCCTTTCTTAATTTCTaGAAGGGAGGCTTCATAGGC +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPAFLNF*KGGFIG
Trigger: GCCTATGAAGCCTCCCTTTCAGAAATTAAGAAAGGC...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAGCCTTTCTTAATTTCTaGAAGGGAGGCTTCATAGGC +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKAFLNF*KGGFIG
Trigger: GCCTATGAAGCCTCCCTTTCAGAAATTAAGAAAGGC...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCGCCTTTCTTAATTTCTaGAAGGGAGGCTTCATAGGC +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFAFLNF*KGGFIG
Trigger: GCCTATGAAGCCTCCCTTTCAGAAATTAAGAAAGGC...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCACTCTTCAGATCATTaGTTTGCTTCTCTAGCGATT +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWHSSDH*FASLAI
Trigger: AATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAGCAGTTTCTCATTCTTaGTCTCTAACACAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGAVSHS*SLTQLS
Trigger: TGAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGC...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAAACTTGATGTCCTGTTaGTGCAGTTTCTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGNLMSC*CSFSFL
Trigger: CAAGAATGAGAAACTGCATCAACAGGACATCAAGTT...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTCGATTCCGCCGGTGGTaGCGCTCCAGTTACCCTACG +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFRFRRW*RSSYPT
Trigger: CGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCG...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGATCTTAATAGGGCCCTaGGAGTTTTTCCCCCTATGC +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGILIGP*EFFPLC
Trigger: GCATAGGGGGAAAAACTCTCAGGGCCCTATTAAGAT...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGGCTGCATCAGACACATaGCACTCTGTGACATCCATT +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGAASDT*HSVTSI
Trigger: AATGGATGTCACAGAGTGTCATGTGTCTGATGCAGC...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGCTGCATCAGACACATaGCACTCTGTGACATCCATT +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILAASDT*HSVTSI
Trigger: AATGGATGTCACAGAGTGTCATGTGTCTGATGCAGC...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCTCCTTAAAGGGTAACTaGAAAATGAGCGCTATCCTC +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSSLKGN*KMSAIL
Trigger: GAGGATAGCGCTCATTTTTCAGTTACCCTTTAAGGA...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCTCACCTCTAGCATCCTaGATCTCTTCTTACTACAGC +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFSPLAS*ISSYYS
Trigger: GCTGTAGTAAGAAGAGATTCAGGATGCTAGAGGTGA...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCTCATGAAGTGGCAGTaGACCTACATTTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWLMKWQ*TYISIY
Trigger: ATAAATGGAAATGTAGGTTCACTGCCACTTCATGAG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCAACAACTTGGAAGCGTaGGCAGAGATATCTCATGAA +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSNNLEA*AEISHE
Trigger: TTCATGAGATATCTCTGCTCACGCTTCCAAGTTGTT...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAACAACTTGGAAGCGTaGGCAGAGATATCTCATGAA +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRNNLEA*AEISHE
Trigger: TTCATGAGATATCTCTGCTCACGCTTCCAAGTTGTT...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCACAGATGTTGCCAAAATaGTGCTCTTCCTCTGAATAC +
Preference number: 4 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPQMLPK*CSSSEY
Trigger: GTATTCAGAGGAAGAGCATCATTTTGGCAACATCTG...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR TCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCTCTTACATGCAAGCCTaGTTTTGTGCCACACCTTCA +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFSYMQA*FCATPS
Trigger: TGAAGGTGTGGCACAAAATCAGGCTTGCATGTAAGA...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544260.3
CDS-3UTR GCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGGGACTGGTGTTGACATaGACATCGTTTTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGGLVLT*TSFCLC
Trigger: GCACAGACAAAACGATGTGCATGTCAACACCAGTCC...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCCAGATCTCGGTGTTCTaGTCAAGACTGTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFQISVF*SRLFVV
Trigger: GACAACAAACAGTCTTGAGCAGAACACCGAGATCTG...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAACCACAGGCAAGAAGCTaGTTGAGCTGCAGGATAAAT +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKPQARS*LSCRIN
Trigger: ATTTATCCTGCAGCTCAAGCAGCTTCTTGCCTGTGG...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTAATCACAACTGTCAATaGCTCAAACTTGGTATTACC +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGNHNCQ*LKLGIT
Trigger: GGTAATACCAAGTTTGAGGCATTGACAGTTGTGATT...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAATTTTCAGCCTGGTGCTaGTGGACGAATGCTTCATAC +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKFSAWC*WTNASY
Trigger: GTATGAAGCATTCGTCCAGCAGCACCAGGCTGAAAA...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCATTTTGTACTTCTCTaGTTCTTCAATGTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPHFVLL*FFNVSV
Trigger: GACACTTACATTGAAGAAGCAGAGAAGTACAAAATG...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTAACTTAGAGGTTTCATaGGCAGCATTTAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGNLEVS*AAFKLS
Trigger: TGACAACTTAAATGCTGCGCATGAAACCTCTAAGTT...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTTTCTCTAGCGATTCCTaGTTCTCAGAAAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGFSSDS*FSESKS
Trigger: AGATTTACTTTCTGAGAAGCAGGAATCGCTAGAGAA...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGTTCAGATCATTGATTTaGTTCTCTAGCGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWFRSLI*FSSDSC
Trigger: GCAGGAATCGCTAGAGAAGCAAATCAATGATCTGAA...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGCAATTTGTCAACCAATaGTGTGTTGTTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLQFVNQ*CVVVHQ
Trigger: CTGGTGGACAACAACACAGCATTGGTTGACAAATTG...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACCTTGAGATTGCCATGTaGTTGTCCATCCGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHLEIAM*LSIRAF
Trigger: GAAAGCTCGGATGGACAAGCACATGGCAATCTCAAG...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTTTCTCCAGCGACTCTTaGAGAACAGCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLFSSDS*RTACSV
Trigger: CACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAA...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCTCAGTCCTGCAGACCTaGATCAAAATGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFSVLQT*IKMLSE
Trigger: CTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGA...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCTCTCGTTCTTTAAGTaGTTTGTGCAACAACGTCCG +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPLSFFK*FVQQRP
Trigger: CGGACGTTGTTGCACAAAGCACTTAAAGAACGAGAG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCCTCTCGTTCTTTAAGTaGTTTGTGCAACAACGTCCG +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFLSFFK*FVQQRP
Trigger: CGGACGTTGTTGCACAAAGCACTTAAAGAACGAGAG...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAGAAGCGGACCATTCTaGTACTTTCCCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPRSGPF*YFPKDK
Trigger: TTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCT...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAACACAATGTTGACACATaGAGGGAGGGGGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKHNVDT*REGEIK
Trigger: CTTTATCTCCCCCTCCCTGCATGTGTCAACATTGTG...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCGCTATGAGATTTATTTaGCGGTCACGTAATACGGAG +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSAMRFI*RSRNTE
Trigger: CTCCGTATTACGTGACCGGCAAATAAATCTCATAGC...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AAACCAACCCTTGGAAGTACAACGGATTTACTGTTTATCAAGAGGGGAAACTTTCCACCCCTCGCACTGTaGAAGAAGCATACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: KPTLGSTTDLLFIKRGNFPPLAL*KKHTGG
Trigger: GCCACCTGTATGCTTCTTGCACAGTGCGAGGGGTGG...AAAGTTTCCCCTCTTGATAAACAGTAAATCCGTTGTACTTCCAAGGGTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR CCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGGTAATGCAGAATCATTaGGGACTTCCATGCCATCAG +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKVMQNH*GLPCHQ
Trigger: CTGATGGCATGGAAGTCCCCAATGATTCTGCATTAC...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACCAAATCCTTTCCTTTaGAGACCATTTGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGPNPFL*RPFVCL
Trigger: AAGACACACAAATGGTCTCCAAAGGAAAGGATTTGG...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAAAAAGGTTACTTTTGTaGGTTCTAGGACTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGKRLLL*VLGLVL
Trigger: CAACACCAGTCCTAGAACCCACAAAAGTAACCTTTT...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGATATTCCTACCTGAGGTaGTCGTTGTTTTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRYSYLR*SLFLKQ
Trigger: CTGCTTCAAAAACAACGACCACCTCAGGTAGGAATA...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACAGCTCACTGTGGGTGCTaGCTATTGAGGGGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTAHCGC*LLRGCF
Trigger: GAAGCACCCCCTCAATAGCCAGCACCCACAGTGAGC...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR CCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGACCATTCTGAAATGCTaGTTTTGGAGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLTILKC*FWRFLL
Trigger: GAGGAGAAACCTCCAAAACCAGCATTTCAGAATGGT...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGATCTCGAAGGACCTTTTaGAGGAGTTTTCATCAAGTG +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRSRRTF*RSFHQV
Trigger: CACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGA...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGTCAAGTTTCTCTGAGTaGCTAGCTTCAATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWSSFSE*LASISN
Trigger: GTTGGAAATTGAAGCTAGCCACTCAGAGAAACTTGA...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGCCCACGTTCCTCCTTaGGGTCAGTCCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVAHVPP*GQSCRP
Trigger: AGGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGC...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAGAAGGTTTGCTTTTGTaGCTCTGGATGGTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKEGLLL*LWMVEK
Trigger: TTTCTCCACCATCCAGAGCCACAAAAGCAAACCTTC...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCGAAGGTTTGCTTTTGTaGCTCTGGATGGTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFEGLLL*LWMVEK
Trigger: TTTCTCCACCATCCAGAGCCACAAAAGCAAACCTTC...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTAACCTGGAGGAGAGTTaGACAAGCCACATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILNLEES*TSHIFH
Trigger: GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTT...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGTATCAGAAGCAAACATaGAAGGTTACATACATGATG +
Preference number: 4 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPYQKQT*KVTYMM
Trigger: CATCATGTATGTAACCTTCCATGTTTGCTTCTGATA...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGTCATTGAGAACAACTTaGAAGCGTGAGCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWSLRTT*KREQRY
Trigger: ATATCTCTGCTCACGCTTCCAAGTTGTTCTCAATGA...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGTGGCAAACCCAACTTTaGCTAATGTCATTGAGAACA +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWWQTQL*LMSLRT
Trigger: TGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCA...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AAAATAACTCTGTCCCTCTCTTCAGCAAGAGAAATATTTTGCTCATCAGAAGTTCAGGAGGCGCGCCATTaGCCCTCGGGCGTCTTACTT +
Preference number: 4 (lower is better)
Translates to: KITLSLSSAREIFCSSEVQEARH*PSGVLL
Trigger: AAGTAAGACGCCCGAGGGCCAATGGCGCGCCTCCTG...AACTTCTGATGAGCAAAATATTTCTCTTGCTGAAGAGAGGGACAGAGTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR TCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGATCAATTCCTTTTAAATaGGAGGGTGGGCAAAATGGT +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRSIPFK*EGGQNG
Trigger: ACCATTTTGCCCACCCTCTCATTTAAAAGGAATTGA...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGCCAAGTCAGTCCAAATaGCGAGCCCACCTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKPSQSK*RAHLLS
Trigger: GGACAAAAGGTGGGCTCGTCATTTGGACTGACTTGG...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCATCTTGGAACCCTGTGTaGAGCATTTTTAGAATGAGT +
Preference number: 4 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPSWNPV*SIFRMS
Trigger: ACTCATTCTAAAAATGCTTCACACAGGGTTCCAAGA...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTCCCGGTCTCGCATGCTaGGTTAGAAGAACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLPGLAC*VRRTGF
Trigger: AAAGCCAGTTCTTCTAACTCAGCATGCGAGACCGGG...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCCATTTTCATTAACTTaGTGTCCTGTTGATGCAGTT +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWPFSLT*CPVDAV
Trigger: AACTGCATCAACAGGACATCAAGTTAATGAAAATGG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTCGTGGAAAGCTGCCTTaGGATTGCCATGTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLRGKLP*DCHVLV
Trigger: GACAAGCACATGGCAATCTCAAGGCAGCTTTCCACG...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACGAGGTGTCATCTGGGTaGAATGCTGGGGCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYEVSSG*NAGARE
Trigger: TTCCCTAGCCCCAGCATTTCACCCAGATGACACCTC...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCTCCTTAAAGGGTAACTaGAAAATGAGCGCTATCCTC +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFSLKGN*KMSAIL
Trigger: GAGGATAGCGCTCATTTTTCAGTTACCCTTTAAGGA...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGCTGACATCACAATGTTaGCACATGCAGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKLTSQC*HMQGGG
Trigger: TCCCCCTCCCTGCATGTGTCAACATTGTGATGTCAG...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCACCTCTAGCATCCTaGATCTCTTCTTACTACAGC +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHSPLAS*ISSYYS
Trigger: GCTGTAGTAAGAAGAGATTCAGGATGCTAGAGGTGA...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGTCACCTCTAGCATCCTaGATCTCTTCTTACTACAGC +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGSPLAS*ISSYYS
Trigger: GCTGTAGTAAGAAGAGATTCAGGATGCTAGAGGTGA...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGCCCATCACTACAAACTaGGCACAACTACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGPITTN*AQLQLS
Trigger: AGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGG...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGAATTCCAGTTCACACTaGTGGCTGAAGAGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKNSSSH*WLKSFV
Trigger: CACAAAACTCTTCAGCCAGCAGTGTGAACTGGAATT...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR GCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCAATTCCAGTTCACACTaGTGGCTGAAGAGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFNSSSH*WLKSFV
Trigger: CACAAAACTCTTCAGCCAGCAGTGTGAACTGGAATT...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTATAAGTAGTTTCTCTTaGATGCGTCTTATCAGAATG +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGISSFS*MRLIRM
Trigger: CATTCTGATAAGACGCATGCAAGAGAAACTACTTAT...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR GCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTTTGGGCTGCAACACTaGTCTAGACATAACTTTTGC +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPFGLQH*SRHNFC
Trigger: GCAAAAGTTATGTCTAGAGCAGTGTTGCAGCCCAAA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCATTACCAGAATTGTTaGTGTAAGTGCTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPHYQNC*CKCSAH
Trigger: GTGAGCTGAGCACTTACAGCAACAATTCTGGTAATG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR GCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACTTCGAGGATTCTTTTaGCTGCTCTTTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKLRGFF*LLFSTA
Trigger: TGCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCTTCGAGGATTCTTTTaGCTGCTCTTTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPLRGFF*LLFSTA
Trigger: TGCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTCATTTTGTACTTCTCTaGTTCTTCAATGTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGHFVLL*FFNVSV
Trigger: GACACTTACATTGAAGAAGCAGAGAAGTACAAAATG...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAAACTGCTCTTGCAATTaGATTTTGTACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGNCSCN*ILYFSA
Trigger: AGCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTT...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGATTCTCTAGCGATTCCTaGTTCTCAGAAAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGFSSDS*FSESKS
Trigger: AGATTTACTTTCTGAGAAGCAGGAATCGCTAGAGAA...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGTTCAGATCATTGATTTaGTTCTCTAGCGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWFRSLI*FSSDSC
Trigger: GCAGGAATCGCTAGAGAAGCAAATCAATGATCTGAA...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGTTCAGATCATTGATTTaGTTCTCTAGCGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLFRSLI*FSSDSC
Trigger: GCAGGAATCGCTAGAGAAGCAAATCAATGATCTGAA...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAATTCTTCATTCTCCTaGTGGAAACGCTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWNSSFS*WKRFNL
Trigger: CAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATT...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACATTCTCCAGCGACTCTTaGAGAACAGCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTFSSDS*RTACSV
Trigger: CACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAA...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACTTCTCCAGCGACTCTTaGAGAACAGCCTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYFSSDS*RTACSV
Trigger: CACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAA...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTAGACCTGCATCAAAATaGTTTCAGAGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPRPASK*FQRVCG
Trigger: TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAAGACCTGCATCAAAATaGTTTCAGAGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKRPASK*FQRVCG
Trigger: TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCT...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCTCTTTAAGTGCTTTGTaGAACAACGTCCGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFSLSAL*NNVRVD
Trigger: ATCGACACGGACGTTGTTGCACAAAGCACTTAAAGA...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CCACAGAAGCTCCTCGTTTTCCATAGAGAGTCGCTTGTTGACTTTCGACTCCTTAGAAGCGGACCATTCTaGTACTTTCCCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: PQKLLVFHRESLVDFRLLRSGPF*YFPKDK
Trigger: TTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCT...AAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGAAAACGAGGAGCTTCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR GCA 90 bp CCTTCATGGACAGCATCCTTTCAACTTCATACTCACTACTCACAAACCAACCCTTTTGTGTTGTTTCAGTaGTTCCTCCCGCCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PSWTASFQLHTHYSQTNPFVLFQ*FLPPCC
Trigger: GCAACAAGGCGGGAGGAAGCACTGAAACAACACAAA...AGGGTTGGTTTGTGAGTAGTGAGTATGAAGTTGAAAGGATGCTGTCCATGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR CCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGACTTCTCCTACCAGTTaGTGGCAGGCTTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKTSPTS*WQASSS
Trigger: ACTGCTGGAAGCCTGCCACCAACTGGTAGGAGAAGT...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR CCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGGGGAAGATGTCCAAGTaGAATAGGATAAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLGKMSK*NRIKKM
Trigger: CATCTTCTTTATCCTATTCCACTTGGACATCTTCCC...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CCA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAAATGTGGTTCGCTATTaGATTCATCATGGGATAAAC +
Preference number: 4 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGNVVRY*IHHGIN
Trigger: GTTTATCCCATGATGAATCCAATAGCGAACCACATT...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAATGTGGTTCGCTATTaGATTCATCATGGGATAAAC +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWNVVRY*IHHGIN
Trigger: GTTTATCCCATGATGAATCCAATAGCGAACCACATT...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTAGTGACTTTATGCTCTaGGTTCAGCACTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILSDFML*VQHLSF
Trigger: GAAGCTCAAGTGCTGAACCCAGAGCATAAAGTCACT...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAAAAGGTTACTTTTGTaGGTTCTAGGACTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRKRLLL*VLGLVL
Trigger: CAACACCAGTCCTAGAACCCACAAAAGTAACCTTTT...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAACTTTGCAGCCTATTaGGGTATTCGTTTTGATTGT +
Preference number: 4 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWNFAAY*GIRFDC
Trigger: ACAATCAAAACGAATACCCCAATAGGCTGCAAAGTT...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGTATTCCTACCTGAGGTaGTCGTTGTTTTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKYSYLR*SLFLKQ
Trigger: CTGCTTCAAAAACAACGACCACCTCAGGTAGGAATA...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCTATTCCTACCTGAGGTaGTCGTTGTTTTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFYSYLR*SLFLKQ
Trigger: CTGCTTCAAAAACAACGACCACCTCAGGTAGGAATA...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTAGTGAACATGAGCCCTaGATACCAAAGGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPSEHEP*IPKASN
Trigger: ATTTGAAGCCTTTGGTATCCAGGGCTCATGTTCACT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGAGTGAACATGAGCCCTaGATACCAAAGGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKSEHEP*IPKASN
Trigger: ATTTGAAGCCTTTGGTATCCAGGGCTCATGTTCACT...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTGACTGCAAAGGGATaGCGGAGGATGTGGGGGATC +
Preference number: 4 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVVTAKG*RRMWGI
Trigger: GATCCCCCACATCCTCCGCCATCCCTTTGCAGTCAC...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTAGAGTCTGTGGACTTTaGGGAGGTGTCATCTGGGTG +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLRVCGL*GGVIWV
Trigger: CACCCAGATGACACCTCCCCAAAGTCCACAGACTCT...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACTGGCTCTGGGGCTCTaGAAAATCATATTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKLALGL*KIIFLY
Trigger: ATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGAAGATGAGCTGGCTCTaGGGCTCTGGAAAATCATAT +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGKMSWL*GSGKSY
Trigger: ATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTT...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAACACATTTTCCACTCATaGGAAAGAAGCGGACCATTC +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKHIFHS*ERSGPF
Trigger: GAATGGTCCGCTTCTTTCCCATGAGTGGAAAATGTG...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGCACATTTTCCACTCATaGGAAAGAAGCGGACCATTC +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGHIFHS*ERSGPF
Trigger: GAATGGTCCGCTTCTTTCCCATGAGTGGAAAATGTG...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTTATCAGAAGCAAACATaGAAGGTTACATACATGATG +
Preference number: 4 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGYQKQT*KVTYMM
Trigger: CATCATGTATGTAACCTTCCATGTTTGCTTCTGATA...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CAA 72 bp GGGGATGAATGGCAAACCCAACTTTGGCTAATGTCATaGAGAACAACTTGGAAGCGTGAGCAGAGATATCTC +
Preference number: 4 (lower is better)
Translates to: GDEWQTQLWLMS*RTTWKREQRYL
Trigger: GAGATATCTCTGCTCACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCATTCATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCGATTTTTCTAGAGCGTaGAAAAGTGCAAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFDFSRA*KSANKL
Trigger: CAGCTTGTTTGCACTTTTTCACGCTCTAGAAAAATC...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR TCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGTATCATCAGTCATCCTaGATAGTAACCTTAAACCTC +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWYHQSS*IVTLNL
Trigger: GAGGTTTAAGGTTACTATTCAGGATGACTGATGATA...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR TCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGACAAGTGCAGGACACTaGCAAATAGAATCTTTATGC +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKTSAGH*QIESLC
Trigger: GCATAAAGATTCTATTTGTCAGTGTCCTGCACTTGT...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACACTGCTTCTAGGGAATaGCAACTGTGTTGCAGATAT +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHTASRE*QLCCRY
Trigger: ATATCTGCAACACAGTTGTCATTCCCTAGAAGCAGT...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR TCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGGAAGAACATGCACACTaGTTTCCAATATCTGAAACA +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLEEHAH*FPISET
Trigger: TGTTTCAGATATTGGAAATCAGTGTGCATGTTCTTC...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR TCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAGAAGCATTTTTAGAATaGGTTGTAACATGCACAGCC +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKEAFLE*VVTCTA
Trigger: GGCTGTGCATGTTACAACTCATTCTAAAAATGCTTC...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTTGTCAACATCTTCCTaGTTCGATTTCACGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHLSTSS*FDFTAD
Trigger: ATCTGCCGTGAAATCGAATCAGGAAGATGTTGACAA...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCAAATAAAAGGATCCTaGGGAACCATTCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPQIKGS*GTILKC
Trigger: GCATTTCAGAATGGTTCCTCAGGATCCTTTTATTTG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCAATTCAAGTTTCTCTaGGTGGCTAGCTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKQFKFL*VASFNF
Trigger: GAAATTGAAGCTAGCCACTCAGAGAAACTTGAATTG...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGGCAGTTTCTCATTCTTaGTCTCTAACACAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKAVSHS*SLTQLS
Trigger: TGAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGC...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGAGAAGGTGTCTGTGGTaGAGAACATTACAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKRRCLW*RTLQRL
Trigger: TAACCTTTGTAATGTTCTTCACCACAGACACCTTCT...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAATCATCGGTAAGCACTaGATCCTACCTTTCTTAATT +
Preference number: 4 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPIIGKH*ILPFLI
Trigger: AATTAAGAAAGGTAGGATTCAGTGCTTACCGATGAT...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTTCCTTAAAGGGTAACTaGAAAATGAGCGCTATCCTC +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILSLKGN*KMSAIL
Trigger: GAGGATAGCGCTCATTTTTCAGTTACCCTTTAAGGA...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGTCCTTAAAGGGTAACTaGAAAATGAGCGCTATCCTC +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGSLKGN*KMSAIL
Trigger: GAGGATAGCGCTCATTTTTCAGTTACCCTTTAAGGA...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp ATATTTTGCTCATCAGAAGTTCTGCTAGGCTTAGTCAGATCAGTGCCAGGAATTGTGCCAGGAATTCTGTaGACTGAAGGTCAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: IFCSSEVLLGLVRSVPGIVPGIL*TEGQAS
Trigger: GCTAGCTTGACCTTCAGTTCACAGAATTCCTGGCAC...AATTCCTGGCACTGATCTGACTAAGCCTAGCAGAACTTCTGATGAGCAAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR GCA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAATGACCATATCATTTaGATCCCAAGTCAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPNDHII*IPSQSK
Trigger: TTTGGACTGACTTGGGATGCAAATGATATGGTCATT...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGACACAGGTTCACAGGTaGCTCCTTCGAGTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKTQVHR*LLRVWY
Trigger: ATACCAGACTCGAAGGAGGCACCTGTGAACCTGTGT...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACCTTCGAGGATTCTTTTaGCTGCTCTTTTCAACTGCA +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHLRGFF*LLFSTA
Trigger: TGCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAG...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCAACTTAGAGGTTTCATaGGCAGCATTTAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSNLEVS*AAFKLS
Trigger: TGACAACTTAAATGCTGCGCATGAAACCTCTAAGTT...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGAACTTAGAGGTTTCATaGGCAGCATTTAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWNLEVS*AAFKLS
Trigger: TGACAACTTAAATGCTGCGCATGAAACCTCTAAGTT...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCAATTTGTCAACCAATaGTGTGTTGTTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILQFVNQ*CVVVHQ
Trigger: CTGGTGGACAACAACACAGCATTGGTTGACAAATTG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACATCTTGCAGAACAGCCTaGTCCGTGGAAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTSCRTA*SVESCL
Trigger: AAGGCAGCTTTCCACGGAGCAGGCTGTTCTGCAAGA...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATTCCAGTCTCAGAAGCTaGGATTCCGCCGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINSSLRS*DSAGGD
Trigger: GTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGA...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTTCCAGTCTCAGAAGCTaGGATTCCGCCGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFSSLRS*DSAGGD
Trigger: GTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGA...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGTCTTTAAGTGCTTTGTaGAACAACGTCCGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGSLSAL*NNVRVD
Trigger: ATCGACACGGACGTTGTTGCACAAAGCACTTAAAGA...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAATCTTTAAGTGCTTTGTaGAACAACGTCCGTGTCGAT +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKSLSAL*NNVRVD
Trigger: ATCGACACGGACGTTGTTGCACAAAGCACTTAAAGA...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAAGAAGCGGACCATTCTaGTACTTTCCCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKRSGPF*YFPKDK
Trigger: TTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCT...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGGAGGATTCTTTTGCCTaGTCTTTTCAACTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGEDSFA*SFQLCG
Trigger: TCCACACAGTTGAAAAGAGCAGGCAAAAGAATCCTC...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR GCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAACTCTCATATCCCTCATaGTTGCTCTTAGTGAATTCG +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKLSYPS*LLLVNS
Trigger: CGAATTCACTAAGAGCAAGCATGAGGGATATGAGAG...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381861.7
CDS-3UTR GCA 90 bp GGAAGTACAACGGATTTACTGTTTATCAAGAGGGGAAACTTTCACTATTCTCATAGAGGCACAGTTTGCTaGTGGGGCAGCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: GSTTDLLFIKRGNFHYSHRGTVC*WGSPFS
Trigger: GGAAAATGGGCTGCCCCAGCAGCAAACTGTGCCTCT...ATGAGAATAGTGAAAGTTTCCCCTCTTGATAAACAGTAAATCCGTTGTACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR CCA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCAATGTGGTTCGCTATTaGATTCATCATGGGATAAAC +
Preference number: 4 (lower is better)
Translates to: CNLEESWTSHIFHSWERSNVVRY*IHHGIN
Trigger: GTTTATCCCATGATGAATCCAATAGCGAACCACATT...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACCAAATCCTTTCCTTTaGAGACCATTTGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKPNPFL*RPFVCL
Trigger: AAGACACACAAATGGTCTCCAAAGGAAAGGATTTGG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAGTAACATGCACAGCCTaGCTAGTAATGAGTTTATTA +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRVTCTA*LVMSLL
Trigger: TAATAAACTCATTACTAGCCAGGCTGTGCATGTTAC...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CTCTGCTTCTTCAATGTAAGTGTCCCGAAGCTTTTCATACTCCCTGGTGTAAAACGGCTCGATCAGCACTaGGATTTCTATTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: LCFFNVSVPKLFILPGVKRLDQH*DFYCHC
Trigger: ACAGTGACAATAGAAATCCCAGTGCTGATCGAGCCG...TTTTACACCAGGGAGTATGAAAAGCTTCGGGACACTTACATTGAAGAAGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTGTGCTCAGCTCACTGTaGGTGCTGGCTATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFVLSSL*VLAIEG
Trigger: CCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCAC...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR CCA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGCTGAAATGCTGGTTTTaGAGGTTTCTCCTCATATTT +
Preference number: 4 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLLKCWF*RFLLIF
Trigger: AAATATGAGGAGAAACCTCCAAAACCAGCATTTCAG...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGCTGAAATGCTGGTTTTaGAGGTTTCTCCTCATATTT +
Preference number: 4 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWLKCWF*RFLLIF
Trigger: AAATATGAGGAGAAACCTCCAAAACCAGCATTTCAG...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTACCATTCTGAAATGCTaGTTTTGGAGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILTILKC*FWRFLL
Trigger: GAGGAGAAACCTCCAAAACCAGCATTTCAGAATGGT...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTAGTGAACATGAGCCCTaGATACCAAAGGCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILSEHEP*IPKASN
Trigger: ATTTGAAGCCTTTGGTATCCAGGGCTCATGTTCACT...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAATCTCGAAGGACCTTTTaGAGGAGTTTTCATCAAGTG +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKSRRTF*RSFHQV
Trigger: CACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGA...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTTCAGCCTGGTGCTGCTaGACGAATGCTTCATACACT +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLSAWCC*TNASYT
Trigger: AGTGTATGAAGCATTCGTCCAGCAGCACCAGGCTGA...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCAAGTTTCTCTGAGTaGCTAGCTTCAATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPSSFSE*LASISN
Trigger: GTTGGAAATTGAAGCTAGCCACTCAGAGAAACTTGA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACGAACAGCCTGCTCCGTaGAAAGCTGCCTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYEQPAP*KAALRL
Trigger: CAATCTCAAGGCAGCTTTCCACGGAGCAGGCTGTTC...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACAGAACAGCCTGCTCCGTaGAAAGCTGCCTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTEQPAP*KAALRL
Trigger: CAATCTCAAGGCAGCTTTCCACGGAGCAGGCTGTTC...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATGTGACTGCAAAGGGATaGCGGAGGATGTGGGGGATC +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINVTAKG*RRMWGI
Trigger: GATCCCCCACATCCTCCGCCATCCCTTTGCAGTCAC...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCATTGAGAACAACTTaGAAGCGTGAGCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPSLRTT*KREQRY
Trigger: ATATCTCTGCTCACGCTTCCAAGTTGTTCTCAATGA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGGCAAACCCAACTTTaGCTAATGTCATTGAGAACA +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPWQTQL*LMSLRT
Trigger: TGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp AAAATAACTCTGTCCCTCTCTTCAGCAAGAGAAATATTTTGCTCATCAGAAGTTGGCACAGTTTGCTGCTaGGGCAGCCCATTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KITLSLSSAREIFCSSEVGTVCC*GSPFSS
Trigger: GCTGGAAAATGGGCTGCCCCAGCAGCAAACTGTGCC...AACTTCTGATGAGCAAAATATTTCTCTTGCTGAAGAGAGGGACAGAGTTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR TCA 90 bp GGTTTTGGAGGTTTCTCCTCATATTTGATGACAGCGGCATTACCAGAATTGTTGAGGCAAATTCACCCATaGCGACTGTGCAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GFGGFSSYLMTAALPELLRQIHP*RLCSFQ
Trigger: TTGAAAACTGCACAGTCGTCATGGGTGAATTTGCCT...CAACAATTCTGGTAATGCCGCTGTCATCAAATATGAGGAGAAACCTCCAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp TTCTTCAATGTAAGTGTCCCGAAGCTTTTCATACTCCCTGGTGTAAAACTCTTTTCAGACAGCAGGTGCTaGATCACAACTGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: FFNVSVPKLFILPGVKLFSDSRC*ITTVNA
Trigger: GGCATTGACAGTTGTGATTCAGCACCTGCTGTCTGA...AAAGAGTTTTACACCAGGGAGTATGAAAAGCTTCGGGACACTTACATTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGAACTTGATGTCCTGTTaGTGCAGTTTCTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGNLMSC*CSFSFL
Trigger: CAAGAATGAGAAACTGCATCAACAGGACATCAAGTT...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACCATTTTCATTAACTTaGTGTCCTGTTGATGCAGTT +
Preference number: 4 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKPFSLT*CPVDAV
Trigger: AACTGCATCAACAGGACATCAAGTTAATGAAAATGG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGATCTTAATAGGGCCCTaGGAGTTTTTCCCCCTATGC +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKILIGP*EFFPLC
Trigger: GCATAGGGGGAAAAACTCTCAGGGCCCTATTAAGAT...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTAGAAGGTGTCTGTGGTaGAGAACATTACAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILRRCLW*RTLQRL
Trigger: TAACCTTTGTAATGTTCTTCACCACAGACACCTTCT...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCATCATCGGTAAGCACTaGATCCTACCTTTCTTAATT +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFIIGKH*ILPFLI
Trigger: AATTAAGAAAGGTAGGATTCAGTGCTTACCGATGAT...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGAGGGTAACTGAAAAATaGGCGCTATCCTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKRVTEK*ALSSQT
Trigger: AGTCTGGGAGGATAGCGCTCATTTTTCAGTTACCCT...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTAGGGTAACTGAAAAATaGGCGCTATCCTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLRVTEK*ALSSQT
Trigger: AGTCTGGGAGGATAGCGCTCATTTTTCAGTTACCCT...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCTCATGAAGTGGCAGTaGACCTACATTTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILLMKWQ*TYISIY
Trigger: ATAAATGGAAATGTAGGTTCACTGCCACTTCATGAG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAAAGAAAGAGACTCACTaGTTTGAATGCTTAATCCGC +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKKKETH*FECLIR
Trigger: GCGGATTAAGCATTCAAATCAGTGAGTCTCTTTCTT...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381861.7
CDS-3UTR GCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAATAAGTAGTTTCTCTTaGATGCGTCTTATCAGAATG +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRISSFS*MRLIRM
Trigger: CATTCTGATAAGACGCATGCAAGAGAAACTACTTAT...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR GCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTAATGACCATATCATTTaGATCCCAAGTCAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPNDHII*IPSQSK
Trigger: TTTGGACTGACTTGGGATGCAAATGATATGGTCATT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GGTTTTGGAGGTTTCTCCTCATATTTGATGACAGCGGCATTACCAGAATTGTTGCAGATCTCGGTGTTCTaGTCAAGACTGTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GFGGFSSYLMTAALPELLQISVF*SRLFVV
Trigger: GACAACAAACAGTCTTGAGCAGAACACCGAGATCTG...CAACAATTCTGGTAATGCCGCTGTCATCAAATATGAGGAGAAACCTCCAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR GCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTCCACAGGCAAGAAGCTaGTTGAGCTGCAGGATAAAT +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLPQARS*LSCRIN
Trigger: ATTTATCCTGCAGCTCAAGCAGCTTCTTGCCTGTGG...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGACATTTTGTACTTCTCTaGTTCTTCAATGTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRHFVLL*FFNVSV
Trigger: GACACTTACATTGAAGAAGCAGAGAAGTACAAAATG...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCAACTGCTCTTGCAATTaGATTTTGTACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFNCSCN*ILYFSA
Trigger: AGCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTT...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGAACTTAGAGGTTTCATaGGCAGCATTTAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKNLEVS*AAFKLS
Trigger: TGACAACTTAAATGCTGCGCATGAAACCTCTAAGTT...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTAACTTAGAGGTTTCATaGGCAGCATTTAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPNLEVS*AAFKLS
Trigger: TGACAACTTAAATGCTGCGCATGAAACCTCTAAGTT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGTTCAGATCATTGATTTaGTTCTCTAGCGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: KEADHSATFPKTKGLLKGFRSLI*FSSDSC
Trigger: GCAGGAATCGCTAGAGAAGCAAATCAATGATCTGAA...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGAATTCTTCATTCTCCTaGTGGAAACGCTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKNSSFS*WKRFNL
Trigger: CAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATT...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACAGAATTCCTTGGTGACTaGAAAGGGATGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTEFLGD*KGMAED
Trigger: ATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTC...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTCACAATGTTGACACATaGAGGGAGGGGGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLHNVDT*REGEIK
Trigger: CTTTATCTCCCCCTCCCTGCATGTGTCAACATTGTG...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGCACAATGTTGACACATaGAGGGAGGGGGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKHNVDT*REGEIK
Trigger: CTTTATCTCCCCCTCCCTGCATGTGTCAACATTGTG...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AACCCTTGGAAGTACAACGGATTTACTGTTTATCAAGAGGGGAAACTTTCACTATTCCTCCCGCCTTGTTaGTGCACATGGAGAATAGAG +
Preference number: 4 (lower is better)
Translates to: NPWKYNGFTVYQEGKLSLFLPPC*CTWRIE
Trigger: CTCTATTCTCCATGTGCAGCAACAAGGCGGGAGGAA...TAGTGAAAGTTTCCCCTCTTGATAAACAGTAAATCCGTTGTACTTCCAAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR CCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGGGAAGATGTCCAAGTaGAATAGGATAAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILGKMSK*NRIKKM
Trigger: CATCTTCTTTATCCTATTCCACTTGGACATCTTCCC...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR CCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACCCAAATCCTTTCCTTTaGAGACCATTTGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHPNPFL*RPFVCL
Trigger: AAGACACACAAATGGTCTCCAAAGGAAAGGATTTGG...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CCA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCAACTTTGCAGCCTATTaGGGTATTCGTTTTGATTGT +
Preference number: 4 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFNFAAY*GIRFDC
Trigger: ACAATCAAAACGAATACCCCAATAGGCTGCAAAGTT...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGGTAACATGCACAGCCTaGCTAGTAATGAGTTTATTA +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKVTCTA*LVMSLL
Trigger: TAATAAACTCATTACTAGCCAGGCTGTGCATGTTAC...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CCA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTGTAACATGCACAGCCTaGCTAGTAATGAGTTTATTA +
Preference number: 4 (lower is better)
Translates to: HLEDELALGLWKIIFLYPVTCTA*LVMSLL
Trigger: TAATAAACTCATTACTAGCCAGGCTGTGCATGTTAC...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CCA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGAAATGCTGGTTTTaGAGGTTTCTCCTCATATTT +
Preference number: 4 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKLKCWF*RFLLIF
Trigger: AAATATGAGGAGAAACCTCCAAAACCAGCATTTCAG...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CTCTGCTTCTTCAATGTAAGTGTCCCGAAGCTTTTCATACTCCCTGGTGTAAAAAAGATGAGCTGGCTCTaGGGCTCTGGAAAATCATAT +
Preference number: 4 (lower is better)
Translates to: LCFFNVSVPKLFILPGVKKMSWL*GSGKSY
Trigger: ATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTT...TTTTACACCAGGGAGTATGAAAAGCTTCGGGACACTTACATTGAAGAAGCAGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTAACCTGGAGGAGAGTTaGACAAGCCACATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLNLEES*TSHIFH
Trigger: GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTT...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAATCATTGAGAACAACTTaGAAGCGTGAGCAGAGATAT +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKSLRTT*KREQRY
Trigger: ATATCTCTGCTCACGCTTCCAAGTTGTTCTCAATGA...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAATGGCAAACCCAACTTTaGCTAATGTCATTGAGAACA +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKWQTQL*LMSLRT
Trigger: TGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCA...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGTCTGGGTTCAGCACTTaGGCTTCGCTCTTATCAAAA +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKSGFST*ASLLSK
Trigger: TTTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGA...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGAAACGCTTCAATTTGTCAACCAATGCTGTGTTGTTGTCCACCAGTTTCTCCACAATTCAAGTTTCTCTaGGTGGCTAGCTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: GNASICQPMLCCCPPVSPQFKFL*VASFNF
Trigger: GAAATTGAAGCTAGCCACTCAGAGAAACTTGAATTG...TGGAGAAACTGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCCATTTTCATTAACTTaGTGTCCTGTTGATGCAGTT +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILPFSLT*CPVDAV
Trigger: AACTGCATCAACAGGACATCAAGTTAATGAAAATGG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACATCATCGGTAAGCACTaGATCCTACCTTTCTTAATT +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHIIGKH*ILPFLI
Trigger: AATTAAGAAAGGTAGGATTCAGTGCTTACCGATGAT...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAATCATCGGTAAGCACTaGATCCTACCTTTCTTAATT +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKIIGKH*ILPFLI
Trigger: AATTAAGAAAGGTAGGATTCAGTGCTTACCGATGAT...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTCTGACATCACAATGTTaGCACATGCAGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFLTSQC*HMQGGG
Trigger: TCCCCCTCCCTGCATGTGTCAACATTGTGATGTCAG...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTCCCATCACTACAAACTaGGCACAACTACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLPITTN*AQLQLS
Trigger: AGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGG...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGCTTCTCCTAAACCCTaGAGGAAGTCGAAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVASPKP*RKSKVS
Trigger: CGAAACCTTCGACTTCCTTCAGGGTTTAGGAGAAGC...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR GCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACGCAGCATCTTTGGGCTaGAACACTGCTCTAGACATA +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYAASLG*NTALDI
Trigger: TATGTCTAGAGCAGTGTTGCAGCCCAAAGATGCTGC...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp TTCTTCAATGTAAGTGTCCCGAAGCTTTTCATACTCCCTGGTGTAAAACTCTTTAATTGTTGCTGTAAGTaGTCAGCTCACTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: FFNVSVPKLFILPGVKLFNCCCK*SAHCGC
Trigger: GCACCCACAGTGAGCTGAGCACTTACAGCAACAATT...AAAGAGTTTTACACCAGGGAGTATGAAAAGCTTCGGGACACTTACATTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR GCA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTAACTTAGAGGTTTCATaGGCAGCATTTAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILNLEVS*AAFKLS
Trigger: TGACAACTTAAATGCTGCGCATGAAACCTCTAAGTT...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTTCTCTAGCGATTCCTaGTTCTCAGAAAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHFSSDS*FSESKS
Trigger: AGATTTACTTTCTGAGAAGCAGGAATCGCTAGAGAA...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATTCTTGCAGAACAGCCTaGTCCGTGGAAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINSCRTA*SVESCL
Trigger: AAGGCAGCTTTCCACGGAGCAGGCTGTTCTGCAAGA...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGCTCTCGTTCTTTAAGTaGTTTGTGCAACAACGTCCG +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKLSFFK*FVQQRP
Trigger: CGGACGTTGTTGCACAAAGCACTTAAAGAACGAGAG...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGAACCACCATGTCATCTaGGTTGGCAGAATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKNHHVI*VGRIPV
Trigger: AACTGGAATTCTGCCAACCCAGATGACATGGTGGTT...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR CCA 90 bp AATGCTGTGTTGTTGTCCACCAGTTTCTCCATTTTCATTAACTTGATGTCCTGTGTCTCTCTCAGATTTTaGCCCATTTCCTTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: NAVLLSTSFSIFINLMSCVSLRF*PISLCL
Trigger: CAGGCACAAGGAAATGGGCCAAAATCTGAGAGAGAC...ACAGGACATCAAGTTAATGAAAATGGAGAAACTGGTGGACAACAACACAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CCA 90 bp AATGCTGTGTTGTTGTCCACCAGTTTCTCCATTTTCATTAACTTGATGTCCTGTTGCCTCCTTCGAGTCTaGTATGTTTTTAAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: NAVLLSTSFSIFINLMSCCLLRV*YVFKPS
Trigger: CGAGGGCTTAAAAACATACCAGACTCGAAGGAGGCA...ACAGGACATCAAGTTAATGAAAATGGAGAAACTGGTGGACAACAACACAGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACACTTTCAGAGAGTCTGTaGACTTTGGGGAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTLSESL*TLGRCH
Trigger: ATGACACCTCCCCAAAGTCCACAGACTCTCTGAAAG...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGCACATTTTCCACTCATaGGAAAGAAGCGGACCATTC +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKHIFHS*ERSGPF
Trigger: GAATGGTCCGCTTCTTTCCCATGAGTGGAAAATGTG...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACATGCCTAGGGGATGAATaGCAAACCCAACTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTCLGDE*QTQLWL
Trigger: TAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCA...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CAA 72 bp TTCAATTCTTCATTCTCCTGCTGGAAACGCTTCAATTaGTCAACCAATGCTGTGTTGTTGTCCACCAGTTTC +
Preference number: 4 (lower is better)
Translates to: FNSSFSCWKRFN*STNAVLLSTSF
Trigger: GAAACTGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATGGGCTTCTGATGGTGTaGCTTGAGGGTTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINGLLMV*LEGFQS
Trigger: GCTTTGAAAACCCTCAAGTCACACCATCAGAAGCCC...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR TCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGCGTCGCTTCAATCGGTaGAACAGAAAAGGTTACTTT +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKRRFNR*NRKGYF
Trigger: AAAGTAACCTTTTCTGTTTCACCGATTGAAGCGACG...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACAGCCTTTCTTAATTTCTaGAAGGGAGGCTTCATAGGC +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTAFLNF*KGGFIG
Trigger: GCCTATGAAGCCTCCCTTTCAGAAATTAAGAAAGGC...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTAGGGTAACTGAAAAATaGGCGCTATCCTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVRVTEK*ALSSQT
Trigger: AGTCTGGGAGGATAGCGCTCATTTTTCAGTTACCCT...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGTCCTTAAAGGGTAACTaGAAAATGAGCGCTATCCTC +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKSLKGN*KMSAIL
Trigger: GAGGATAGCGCTCATTTTTCAGTTACCCTTTAAGGA...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGCCGTCAGTCGTATGTaGATGGTGGATAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVAVSRM*MVDKEN
Trigger: ATTCTCCTTATCCACCATTCACATACGACTGACGGC...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR GCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTACACAGGTTCACAGGTaGCTCCTTCGAGTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFTQVHR*LLRVWY
Trigger: ATACCAGACTCGAAGGAGGCACCTGTGAACCTGTGT...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACACAGATCTCGGTGTTCTaGTCAAGACTGTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTQISVF*SRLFVV
Trigger: GACAACAAACAGTCTTGAGCAGAACACCGAGATCTG...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTTTTGGAGCAGCTATTTaGCTCAAACCGCAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVFGAAI*LKPQES
Trigger: TGACTCCTGCGGTTTGAGGCAAATAGCTGCTCCAAA...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACAGAAGCTGCTTGAGCTaGAGGATAAATCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYRSCLS*RINPLW
Trigger: CCAAAGTGGATTTATCCTGCAGCTCAAGCAGCTTCT...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTTTTGTGTTGTTTCAGTaGTTCCTCCCGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVFVLFQ*FLPLRQ
Trigger: CTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAA...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTCAATTTGTCAACCAATaGTGTGTTGTTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLQFVNQ*CVVVHQ
Trigger: CTGGTGGACAACAACACAGCATTGGTTGACAAATTG...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACACTCTCGTTCTTTAAGTaGTTTGTGCAACAACGTCCG +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTLSFFK*FVQQRP
Trigger: CGGACGTTGTTGCACAAAGCACTTAAAGAACGAGAG...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGGCTATGAGATTTATTTaGCGGTCACGTAATACGGAG +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKAMRFI*RSRNTE
Trigger: CTCCGTATTACGTGACCGGCAAATAAATCTCATAGC...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTCTTCGAGGATTCTTTTaGCTGCTCTTTTCAACTGTG +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLLRGFF*LLFSTV
Trigger: CACAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAG...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR GCA 90 bp AAAATAACTCTGTCCCTCTCTTCAGCAAGAGAAATATTTTGCTCATCAGAAGTTAATAGAGGCACAGTTTaGTGCTGGGGCAGCCCATTT +
Preference number: 4 (lower is better)
Translates to: KITLSLSSAREIFCSSEVNRGTV*CWGSPF
Trigger: AAATGGGCTGCCCCAGCAGCAAACTGTGCCTCTATT...AACTTCTGATGAGCAAAATATTTCTCTTGCTGAAGAGAGGGACAGAGTTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR CCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTTCTCGAAGGACCTTTTaGAGGAGTTTTCATCAAGTG +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLSRRTF*RSFHQV
Trigger: CACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGA...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CTCTGCTTCTTCAATGTAAGTGTCCCGAAGCTTTTCATACTCCCTGGTGTAAAATCTTCATTCTCCTGCTaGAAACGCTTCAATTTGTCA +
Preference number: 4 (lower is better)
Translates to: LCFFNVSVPKLFILPGVKSSFSC*KRFNLS
Trigger: TGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGA...TTTTACACCAGGGAGTATGAAAAGCTTCGGGACACTTACATTGAAGAAGCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTCTGGCTCTGGGGCTCTaGAAAATCATATTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLLALGL*KIIFLY
Trigger: ATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAG...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAATATCAGAAGCAAACATaGAAGGTTACATACATGATG +
Preference number: 4 (lower is better)
Translates to: AGSGALENHIPLSLSQRKYQKQT*KVTYMM
Trigger: CATCATGTATGTAACCTTCCATGTTTGCTTCTGATA...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGTTTTGGAGGTTTCTCCTCATATTTGATGACAGCGGCATTACCAGAATTGTTGTGGCAAACCCAACTTTaGCTAATGTCATTGAGAACA +
Preference number: 4 (lower is better)
Translates to: GFGGFSSYLMTAALPELLWQTQL*LMSLRT
Trigger: TGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCA...CAACAATTCTGGTAATGCCGCTGTCATCAAATATGAGGAGAAACCTCCAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR TCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACTGCTTCTAGGGAATaGCAACTGTGTTGCAGATAT +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYTASRE*QLCCRY
Trigger: ATATCTGCAACACAGTTGTCATTCCCTAGAAGCAGT...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR TCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACTCCGATGGCATGATGTaGTATAAAGGTGCAGTTAAC +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYSDGMM*YKGAVN
Trigger: GTTAACTGCACCTTTATATCACATCATGCCATCGGA...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR TCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTCAAATAAAAGGATCCTaGGGAACCATTCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLQIKGS*GTILKC
Trigger: GCATTTCAGAATGGTTCCTCAGGATCCTTTTATTTG...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTAGAAGGTGTCTGTGGTaGAGAACATTACAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLRRCLW*RTLQRL
Trigger: TAACCTTTGTAATGTTCTTCACCACAGACACCTTCT...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACAGGCATCACAGTAGCCTaGACAGTTCAAATTGTCATT +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTGITVA*TVQIVI
Trigger: AATGACAATTTGAACTGTGCAGGCTACTGTGATGCC...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR GCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATTTTGTGTTGTTTCAGTaGTTCCTCCCGCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINFVLFQ*FLPLRQ
Trigger: CTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAA...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACACAATTTGTCAACCAATaGTGTGTTGTTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTQFVNQ*CVVVHQ
Trigger: CTGGTGGACAACAACACAGCATTGGTTGACAAATTG...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACAGACCTGCATCAAAATaGTTTCAGAGAGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYRPASK*FQRVCG
Trigger: TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCT...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACAAGAAGCGGACCATTCTaGTACTTTCCCAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTRSGPF*YFPKDK
Trigger: TTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCT...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGTCTTCATTCTCCTGCTaGAAACGCTTCAATTTGTCA +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKSSFSC*KRFNLS
Trigger: TGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGA...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp TTCTTCAATGTAAGTGTCCCGAAGCTTTTCATACTCCCTGGTGTAAAACTCTTTCTGGCTCTGGGGCTCTaGAAAATCATATTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: FFNVSVPKLFILPGVKLFLALGL*KIIFLY
Trigger: ATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAG...AAAGAGTTTTACACCAGGGAGTATGAAAAGCTTCGGGACACTTACATTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATTGCCTAGGGGATGAATaGCAAACCCAACTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINCLGDE*QTQLWL
Trigger: TAGCCAAAGTTGGGTTTGCCATTCATCCCCTAGGCA...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CAA 72 bp CTTTCAACTTCATACTCACTACTCACAAACCAACCCTaGGAAGTACAACGGATTTACTGTTTATCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LSTSYSLLTNQP*EVQRIYCLSRG
Trigger: CCCTCTTGATAAACAGTAAATCCGTTGTACTTCCAAGGGTTGGTTTGTGAGTAGTGAGTATGAAGTTGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR TCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATGTTTTGTGTAGGTGGTaGTTTCGGGTTGTATGCATG +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINVLCRW*FRVVCM
Trigger: CATGCATACAACCCGAAATCACCACCTACACAAAAC...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR TCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACAGAAGCATTTTTAGAATaGGTTGTAACATGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTEAFLE*VVTCTA
Trigger: GGCTGTGCATGTTACAACTCATTCTAAAAATGCTTC...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR TCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACCAATTCAAGTTTCTCTaGGTGGCTAGCTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYQFKFL*VASFNF
Trigger: GAAATTGAAGCTAGCCACTCAGAGAAACTTGAATTG...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGAATTATACTAGCCAATaGCTTCCTTGTTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKNYTSQ*LPCSRS
Trigger: AGAACGAGAACAAGGAAGTCATTGGCTAGTATAATT...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTTCCTTAAAGGGTAACTaGAAAATGAGCGCTATCCTC +
Preference number: 4 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVSLKGN*KMSAIL
Trigger: GAGGATAGCGCTCATTTTTCAGTTACCCTTTAAGGA...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACACTCATGAAGTGGCAGTaGACCTACATTTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTLMKWQ*TYISIY
Trigger: ATAAATGGAAATGTAGGTTCACTGCCACTTCATGAG...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACGTAGTTTCTCTTGCATaGGTCTTATCAGAATGGGAA +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYVVSLA*VLSEWE
Trigger: TTCCCATTCTGATAAGACGCATGCAAGAGAAACTAC...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR GCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTTCAGTCCTGCAGACCTaGATCAAAATGCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFSVLQT*IKMLSE
Trigger: CTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGA...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGCTATGAGATTTATTTaGCGGTCACGTAATACGGAG +
Preference number: 4 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVAMRFI*RSRNTE
Trigger: CTCCGTATTACGTGACCGGCAAATAAATCTCATAGC...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATGTAATGCAGAATCATTaGGGACTTCCATGCCATCAG +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINVMQNH*GLPCHQ
Trigger: CTGATGGCATGGAAGTCCCCAATGATTCTGCATTAC...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CCA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTAACTTTGCAGCCTATTaGGGTATTCGTTTTGATTGT +
Preference number: 4 (lower is better)
Translates to: DCFLLSSTASSVSTESYLNFAAY*GIRFDC
Trigger: ACAATCAAAACGAATACCCCAATAGGCTGCAAAGTT...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CCA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTACCATTCTGAAATGCTaGTTTTGGAGGTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVTILKC*FWRFLL
Trigger: GAGGAGAAACCTCCAAAACCAGCATTTCAGAATGGT...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACATCAAGTTTCTCTGAGTaGCTAGCTTCAATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTSSFSE*LASISN
Trigger: GTTGGAAATTGAAGCTAGCCACTCAGAGAAACTTGA...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACATGGCAAACCCAACTTTaGCTAATGTCATTGAGAACA +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTWQTQL*LMSLRT
Trigger: TGTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCA...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACATCAGTCGTATGTGAATaGTGGATAAGGAGAATTTGG +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTSVVCE*WIRRIW
Trigger: CCAAATTCTCCTTATCCACCATTCACATACGACTGA...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR CCA 90 bp GAAGTACAACGGATTTACTGTTTATCAAGAGGGGAAACTTTCACTATTCTCATACCTTGTTGCTGCACATaGAGAATAGAGGCACAGTTT +
Preference number: 4 (lower is better)
Translates to: EVQRIYCLSRGETFTILIPCCCT*RIEAQF
Trigger: AAACTGTGCCTCTATTCTCCATGTGCAGCAACAAGG...TATGAGAATAGTGAAAGTTTCCCCTCTTGATAAACAGTAAATCCGTTGTACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR TCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACGAAGAACATGCACACTaGTTTCCAATATCTGAAACA +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYEEHAH*FPISET
Trigger: TGTTTCAGATATTGGAAATCAGTGTGCATGTTCTTC...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR TCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTTTGTCAACATCTTCCTaGTTCGATTTCACGGCAGAT +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFLSTSS*FDFTAD
Trigger: ATCTGCCGTGAAATCGAATCAGGAAGATGTTGACAA...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR GCA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACAAACTGCTCTTGCAATTaGATTTTGTACTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTNCSCN*ILYFSA
Trigger: AGCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTT...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTGCTATGAGATTTATTTaGCGGTCACGTAATACGGAG +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFAMRFI*RSRNTE
Trigger: CTCCGTATTACGTGACCGGCAAATAAATCTCATAGC...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTGCAAGCCTGATTTTGTaGCACACCTTCAAAATTCCA +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFASLIL*HTFKIP
Trigger: TGGAATTTTGAAGGTGTGGCACAAAATCAGGCTTGC...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544260.3
CDS-3UTR CCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATCTGGCTCTGGGGCTCTaGAAAATCATATTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINLALGL*KIIFLY
Trigger: ATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAG...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTCAAATAAAAGGATCCTaGGGAACCATTCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFQIKGS*GTILKC
Trigger: GCATTTCAGAATGGTTCCTCAGGATCCTTTTATTTG...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTCACTCTTCAGATCATTaGTTTGCTTCTCTAGCGATT +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFHSSDH*FASLAI
Trigger: AATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTG...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR TCA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTGCAGTTTCTCATTCTTaGTCTCTAACACAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFAVSHS*SLTQLS
Trigger: TGAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGC...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACATAAGTAGTTTCTCTTaGATGCGTCTTATCAGAATG +
Preference number: 4 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYISSFS*MRLIRM
Trigger: CATTCTGATAAGACGCATGCAAGAGAAACTACTTAT...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR CCA 90 bp GAAGTACAACGGATTTACTGTTTATCAAGAGGGGAAACTTTCACTATTCTCATATCACAAACCAACCCTTaGAAGTACAACGGATTTACT +
Preference number: 4 (lower is better)
Translates to: EVQRIYCLSRGETFTILISQTNP*KYNGFT
Trigger: AGTAAATCCGTTGTACTTCCAAGGGTTGGTTTGTGA...TATGAGAATAGTGAAAGTTTCCCCTCTTGATAAACAGTAAATCCGTTGTACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR TCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATAATTATACTAGCCAATaGCTTCCTTGTTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINNYTSQ*LPCSRS
Trigger: AGAACGAGAACAAGGAAGTCATTGGCTAGTATAATT...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATAATCACAACTGTCAATaGCTCAAACTTGGTATTACC +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINNHNCQ*LKLGIT
Trigger: GGTAATACCAAGTTTGAGGCATTGACAGTTGTGATT...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATAATTCTTCATTCTCCTaGTGGAAACGCTTCAATTTG +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINNSSFS*WKRFNL
Trigger: CAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATT...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
3UTR CAA 72 bp CTGAGCACAACTACAGTTGTCTACACATTCATATTTTaGACGTGCCAACATTTTGCATTCTACATGAAACAT +
Preference number: 4 (lower is better)
Translates to: LSTTTVVYTFIF*TCQHFAFYMKH
Trigger: ATGTTTCATGTAGAATGCAAAATGTTGGCACGTCAAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR GCA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATCATTTTGTACTTCTCTaGTTCTTCAATGTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: LKTHKKVSVVKNITKVINHFVLL*FFNVSV
Trigger: GACACTTACATTGAAGAAGCAGAGAAGTACAAAATG...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS GCA 90 bp CAAGGTGACAGCGACGAGATCCGCATCCGTCCCTTCCGCAGGCTCTaGGCTGGCCCACGTGAGACCCGCCTCCGCTCCGCCGGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: QGDSDEIRIRPFRRL*AGPRETRLRSAGAA
Trigger: GGCAGCGCCGGCGGAGCGGAGGCGGGTCTCACGTGGGCCAGCGCAGAGCCTGCGGAAGGGACGGATGCGGATCTCGTCGCTGTCACCTTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000523718.5
CDS TCA 90 bp CAGCAACCCTATTCCACCCGCTTTCTCGGCCCCGCTTGCTTCTGCTaGGAAGGGGCCCTGCGAGAAGGCTGGGACCGCCGGGCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: QQPYSTRFLGPACFC*EGALREGWDRRARV
Trigger: CACCCGGGCCCGGCGGTCCCAGCCTTCTCGCAGGGCCCCTTCTCAGCAGAAGCAAGCGGGGCCGAGAAAGCGGGTGGAATAGGGTTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000523718.5
CDS-3UTR CAA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACC +
Preference number: 5 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTCPRSS*GSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS GCA 90 bp CAAGCTGCAGAAAGTAGCGAGGCGCCACGAGGGGTCTTTGGGACCTaGAGCAACCCTATTCCACCCGCTTTCTCGGCCCCGCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: QAAESSEAPRGVFGT*SNPIPPAFSAPLAS
Trigger: AGAAGCAAGCGGGGCCGAGAAAGCGGGTGGAATAGGGTTGCTGCAGGTCCCAAAGACCCCTCGTGGCGCCTCGCTACTTTCTGCAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000523718.5
CDS GCA 90 bp AGAGCCCTGAGGCCCACTGAAGCCCACCATGGCCCACAGAGGCCATaGGACCTTAGGACAACACTGAGTGCCATTTCAGGGCAGGCTCTC +
Preference number: 5 (lower is better)
Translates to: RALRPTEAHHGPQRP*DLRTTLSAISGQAL
Trigger: GAGAGCCTGCCCTGAAATGGCACTCAGTGTTGTCCTAAGGTCGCATGGCCTCTGTGGGCCATGGTGGGCTTCAGTGGGCCTCAGGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCATGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACC +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPCPRSS*GSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGCTTCTCCAGCGACTCTaGCAGAACAGCCTGCTCCGT +
Preference number: 5 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTLLQRL*QNSLLR
Trigger: ACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAAG...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATATGTGGGTGCTGGCTATaGAGGGGGTGCTTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: PPVVTLQLPYGDHTCADICGCWL*RGCFLS
Trigger: GGACAGGAAGCACCCCCTCAATAGCCAGCACCCACA...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR CAA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCTTCTCCAGCGACTCTaGCAGAACAGCCTGCTCCGT +
Preference number: 5 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHLLQRL*QNSLLR
Trigger: ACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAAG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGGAGAGTCTGTGGACTTaGGGGAGGTGTCATCTGGGT +
Preference number: 5 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTESLWT*GRCHLG
Trigger: ACCCAGATGACACCTCCCCAAAGTCCACAGACTCTC...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTTGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACC +
Preference number: 5 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGCPRSS*GSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS TCA 90 bp AATGCCCTCACGAGGATCACCCAAGACGGAGCTCCCACCACATCCTaGTCACAGCGTTGCAGAGATCATGAGACCCGGCCTTTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: NALTRITQDGAPTTS*SQRCRDHETRPLQA
Trigger: TGCCTGCAAAGGCCGGGTCTCATGATCTCTGCAACGCTGTGATCAGGATGTGGTGGGAGCTCCGTCTTGGGTGATCCTCGTGAGGGCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521772.5
CDS-3UTR CAA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGCTTCTCCAGCGACTCTaGCAGAACAGCCTGCTCCGT +
Preference number: 5 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRLLQRL*QNSLLR
Trigger: ACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAAG...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTAGGAGCCCGAATTCCTaGGTGACTGCAAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDARSPNS*VTAKGW
Trigger: CCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCT...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAAGGAGCCCGAATTCCTaGGTGACTGCAAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPRSPNS*VTAKGW
Trigger: CCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCT...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGAGAGTCTGTGGACTTaGGGGAGGTGTCATCTGGGT +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPESLWT*GRCHLG
Trigger: ACCCAGATGACACCTCCCCAAAGTCCACAGACTCTC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTGAGAGTCTGTGGACTTaGGGGAGGTGTCATCTGGGT +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAESLWT*GRCHLG
Trigger: ACCCAGATGACACCTCCCCAAAGTCCACAGACTCTC...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS GCA 90 bp CTTCCTCCCGCCTTGTTGCTGCACATGGAGAATAGAGGCACAGTTTaGTGCTGGGGCAGCCCATTTTCCAGCTTCTGTCTCCAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: LPPALLLHMENRGTV*CWGSPFSSFCLQVP
Trigger: GGGGACTTGGAGACAGAAGCTGGAAAATGGGCTGCCCCAGCAGCAAACTGTGCCTCTATTCTCCATGTGCAGCAACAAGGCGGGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517413.5
ENST00000519066.5
ENST00000634613.1
CDS-3UTR CAA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTACCTGAGGTGGTCGTaGTTTTTGAAGCAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTYLRWS*FLKQSP
Trigger: TGGGCTCTGCTTCAAAAACAACGACCACCTCAGGTA...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACCCGTGGAAAGCTGCCTaGAGATTGCCATGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHPWKAA*RLPCAC
Trigger: ACAAGCACATGGCAATCTCAAGGCAGCTTTCCACGG...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTCTTCTCCAGCGACTCTaGCAGAACAGCCTGCTCCGT +
Preference number: 5 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGLLQRL*QNSLLR
Trigger: ACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAAG...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCTACACAGGTCCCCATaGTGCAGTTTCCACAGAAGC +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDALHRSP*CSFHRS
Trigger: GCTTCTGTGGAAACTGCACAATGGGGACCTGTGTAG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS GCA 90 bp AAGTCGACTTACAATTGTTGCTGTAAGTGCTCAGCTCACTGTGGGTaGTGGCTATTGAGGGGGTGCTTCCTGTCCTCCGCAGCGCAGGAC +
Preference number: 5 (lower is better)
Translates to: KSTYNCCCKCSAHCG*WLLRGCFLSSAAQD
Trigger: GTCCTGCGCTGCGGAGGACAGGAAGCACCCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCACTTACAGCAACAATTGTAAGTCGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523718.5
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACGGCAGATGTTGTTCTaGGAACCCTGTGTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPRQMLF*EPCVKH
Trigger: ATGCTTCACACAGGGTTCCAAGAACAACATCTGCCG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGGAAGGAGCCCGAATTCCTTGGTGACTGCAAAGGGATGGCGGAGGATGTGGGGGCTTCGAGGATTCTTTaGCCTGCTCTTTTCAACTGC +
Preference number: 5 (lower is better)
Translates to: GKEPEFLGDCKGMAEDVGASRIL*PALFNC
Trigger: GCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAGC...CCCCACATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGATAGAGAGTCGCTTGTaGACTTTCGACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTIESRL*TFDSFS
Trigger: GGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTAT...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGCTACACAGGTCCCCATaGTGCAGTTTCCACAGAAGC +
Preference number: 5 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPLHRSP*CSFHRS
Trigger: GCTTCTGTGGAAACTGCACAATGGGGACCTGTGTAG...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGGAGAGTCTGTGGACTTaGGGGAGGTGTCATCTGGGT +
Preference number: 5 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPESLWT*GRCHLG
Trigger: ACCCAGATGACACCTCCCCAAAGTCCACAGACTCTC...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGTGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACC +
Preference number: 5 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLCPRSS*GSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGCGCCACGAGGGGTCTTaGGGACCTGCAGCAACCCTA +
Preference number: 5 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLRHEGS*GPAATL
Trigger: TAGGGTTGCTGCAGGTCCCAAAGACCCCTCGTGGCG...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381869.5
CDS-3UTR CAA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACCATGTCATCTGGGTaGGCAGAATTCCAGTTCACA +
Preference number: 5 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHTMSSG*AEFQFT
Trigger: TGTGAACTGGAATTCTGCCAACCCAGATGACATGGT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CAA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGGGAATGACAACTGTGTaGCAGATATTTGGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTGMTTV*QIFGLL
Trigger: GAGAAGCCCAAATATCTGCAACACAGTTGTCATTCC...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATTTTTGGCCCATTTCCTaGTGCCTGTATGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDFWPIS*CLYELC
Trigger: ACAGAGCTCATACAGGCACAAGGAAATGGGCCAAAA...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCTCTGGGTTCAGCACTaGAGCTTCGCTCTTATCAAA +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDALWVQH*SFALIK
Trigger: TTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGAG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGCGGCAGATGTTGTTCTaGGAACCCTGTGTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPRQMLF*EPCVKH
Trigger: ATGCTTCACACAGGGTTCCAAGAACAACATCTGCCG...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTATTTCACGGCAGATGTaGTTCTTGGAACCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAISRQM*FLEPCV
Trigger: CACACAGGGTTCCAAGAACAACATCTGCCGTGAAAT...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGTACCTGAGGTGGTCGTaGTTTTTGAAGCAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPYLRWS*FLKQSP
Trigger: TGGGCTCTGCTTCAAAAACAACGACCACCTCAGGTA...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGCTTCGAGGATTCTTTaGCCTGCTCTTTTCAACTGC +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPASRIL*PALFNC
Trigger: GCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAGC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGGTCAATGCCTCAAACTaGGTATTACCACAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTVNASN*VLPQAR
Trigger: TCTTGCCTGTGGTAATACCAAGTTTGAGGCATTGAC...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCATCAACCAATGCTGTGTaGTTGTCCACCAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPSTNAV*LSTSFS
Trigger: GGAGAAACTGGTGGACAACAACACAGCATTGGTTGA...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTGAGATTGCCATGTGCTaGTCCATCCGAGCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAEIAMC*SIRAFN
Trigger: ATTGAAAGCTCGGATGGACAAGCACATGGCAATCTC...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATGAGATTGCCATGTGCTaGTCCATCCGAGCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDEIAMC*SIRAFN
Trigger: ATTGAAAGCTCGGATGGACAAGCACATGGCAATCTC...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACTCCATAGAGAGTCGCTaGTTGACTTTCGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHSIESR*LTFDSF
Trigger: GAAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGA...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTAGGAGCCCGAATTCCTaGGTGACTGCAAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGRSPNS*VTAKGW
Trigger: CCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCT...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCGTTCTTTAAGTGCTTaGTGCAACAACGTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDRSLSA*CNNVRV
Trigger: GACACGGACGTTGTTGCACAAAGCACTTAAAGAACG...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACGTTCTTTAAGTGCTTaGTGCAACAACGTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPRSLSA*CNNVRV
Trigger: GACACGGACGTTGTTGCACAAAGCACTTAAAGAACG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS TCA 90 bp AGACGGAGCTCCCACCACATCCTGATCACAGCGTTGCAGAGATCATaGGACCCGGCCTTTGCAGGCAAGAGTTGCTTGTCATTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: RRSSHHILITALQRS*DPAFAGKSCLSFKA
Trigger: TGCTTTGAATGACAAGCAACTCTTGCCTGCAAAGGCCGGGTCTCATGATCTCTGCAACGCTGTGATCAGGATGTGGTGGGAGCTCCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521772.5
CDS GCA 90 bp GGCAATGTCGCGAGACTCTGTCCCCACATGTGCACACACAAAGAATaGATGAAGAGCAACGCAACTGGGATTCACCGCTCAACTCTCCTC +
Preference number: 5 (lower is better)
Translates to: GNVARLCPHMCTHKE*MKSNATGIHRSTLL
Trigger: GAGGAGAGTTGAGCGGTGAATCCCAGTTGCGTTGCTCTTCATGCATTCTTTGTGTGTGCACATGTGGGGACAGAGTCTCGCGACATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523471.5
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGGTGGTGATTTCGGGTaGTATGCATGTGTATTTCCA +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPGGDFG*YACVFP
Trigger: TGGAAATACACATGCATACAACCCGAAATCACCACC...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCTGCACAGTTCAAATaGTCATTAGGCTTCCACACA +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAPAQFK*SLGFHT
Trigger: TGTGTGGAAGCCTAATGACAATTTGAACTGTGCAGG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCATCCTTTGGAGACCATTaGTGTGTCTTCAGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPSFGDH*CVFSLS
Trigger: ACTGAGACTGAAGACACACAAATGGTCTCCAAAGGA...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCCCAAATCCTTTCCTTaGGAGACCATTTGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDPKSFP*ETICVS
Trigger: AGACACACAAATGGTCTCCAAAGGAAAGGATTTGGG...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCAGAAAAGGTTACTTTaGTGGGTTCTAGGACTGGTG +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAQKRLL*WVLGLV
Trigger: CACCAGTCCTAGAACCCACAAAAGTAACCTTTTCTG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAATTTCACGGCAGATGTaGTTCTTGGAACCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIISRQM*FLEPCV
Trigger: CACACAGGGTTCCAAGAACAACATCTGCCGTGAAAT...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGTACCTGAGGTGGTCGTaGTTTTTGAAGCAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPYLRWS*FLKQSP
Trigger: TGGGCTCTGCTTCAAAAACAACGACCACCTCAGGTA...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATGGTTTCTCCTCATATTaGATGACAGCGGCATTACCA +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDGFSSY*MTAALP
Trigger: TGGTAATGCCGCTGTCATCAAATATGAGGAGAAACC...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTACCAATGCTGTGTTGTaGTCCACCAGTTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDATNAVL*STSFSI
Trigger: AATGGAGAAACTGGTGGACAACAACACAGCATTGGT...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAACCAATGCTGTGTTGTaGTCCACCAGTTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPTNAVL*STSFSI
Trigger: AATGGAGAAACTGGTGGACAACAACACAGCATTGGT...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAGAGATTGCCATGTGCTaGTCCATCCGAGCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIEIAMC*SIRAFN
Trigger: ATTGAAAGCTCGGATGGACAAGCACATGGCAATCTC...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGGAGATTGCCATGTGCTaGTCCATCCGAGCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRREIAMC*SIRAFN
Trigger: ATTGAAAGCTCGGATGGACAAGCACATGGCAATCTC...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTCCGTGGAAAGCTGCCTaGAGATTGCCATGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGPWKAA*RLPCAC
Trigger: ACAAGCACATGGCAATCTCAAGGCAGCTTTCCACGG...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCCTTCTCCAGCGACTCTaGCAGAACAGCCTGCTCCGT +
Preference number: 5 (lower is better)
Translates to: CNLEESWTSHIFHSWERSLLQRL*QNSLLR
Trigger: ACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAAG...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGTCCATAGAGAGTCGCTaGTTGACTTTCGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPSIESR*LTFDSF
Trigger: GAAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGA...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACC +
Preference number: 5 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHCPRSS*GSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS TCA 90 bp ATGACAGCGGCATTACCAGCAGAACTGGACACACGCCTGATCCTCTaGGGAGATACGGCTCGATCAGCACTGGGATTTCTATTGTCACTG +
Preference number: 5 (lower is better)
Translates to: MTAALPAELDTRLIL*GDTARSALGFLLSL
Trigger: CAGTGACAATAGAAATCCCAGTGCTGATCGAGCCGTATCTCCTCAGAGGATCAGGCGTGTGTCCAGTTCTGCTGGTAATGCCGCTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000519263.5
CDS GCA 90 bp GAGCATTTACAAGACTTGTACCCTCTGCATTTTCTCCTCCTCCTCTaGCAGCCCATCCCTTTCTCCCGGACTACAGTCAGACGCACTCTT +
Preference number: 5 (lower is better)
Translates to: EHLQDLYPLHFLLLL*QPIPFSRTTVRRTL
Trigger: AAGAGTGCGTCTGACTGTAGTCCGGGAGAAAGGGATGGGCTGGCAGAGGAGGAGGAGAAAATGCAGAGGGTACAAGTCTTGTAAATGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518792.5
CDS-3UTR CAA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAGGTGGTGATTTCGGGTaGTATGCATGTGTATTTCCA +
Preference number: 5 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIGGDFG*YACVFP
Trigger: TGGAAATACACATGCATACAACCCGAAATCACCACC...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CAA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTACCATGTCATCTGGGTaGGCAGAATTCCAGTTCACA +
Preference number: 5 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGTMSSG*AEFQFT
Trigger: TGTGAACTGGAATTCTGCCAACCCAGATGACATGGT...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CAA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGGAATGACAACTGTGTaGCAGATATTTGGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPGMTTV*QIFGLL
Trigger: GAGAAGCCCAAATATCTGCAACACAGTTGTCATTCC...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CAA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATACCTGCACAGTTCAAATaGTCATTAGGCTTCCACACA +
Preference number: 5 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIPAQFK*SLGFHT
Trigger: TGTGTGGAAGCCTAATGACAATTTGAACTGTGCAGG...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CAA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGTAATGCAGAATCATaGGGGACTTCCATGCCATCA +
Preference number: 5 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRCNAES*GTSMPS
Trigger: TGATGGCATGGAAGTCCCCAATGATTCTGCATTACA...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATGACATGCACATCGTTTaGTCTGTGCTAATGACCATA +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDDMHIV*SVLMTI
Trigger: TATGGTCATTAGCACAGACAAAACGATGTGCATGTC...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGGTTCTAGGACTGGTGTaGACATGCACATCGTTTTGT +
Preference number: 5 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRVLGLV*TCTSFC
Trigger: ACAAAACGATGTGCATGTCAACACCAGTCCTAGAAC...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACAGACTGTTTGTTGTCTaGAATTCACTGATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHRLFVV*NSLMRV
Trigger: CACCCTCATCAGTGAATTCAAGACAACAAACAGTCT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTAGACTGTTTGTTGTCTaGAATTCACTGATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDARLFVV*NSLMRV
Trigger: CACCCTCATCAGTGAATTCAAGACAACAAACAGTCT...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCCGCAGGAGTCAGGCTaGGATATATTCCTACCTGAG +
Preference number: 5 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWPQESG*DIFLPE
Trigger: CTCAGGTAGGAATATATCCAAGCCTGACTCCTGCGG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGTTTTGTGTTGTTTCAGTGCTTCCTCCCGCTCAGACAGCAGGTGCTGAATCACCCGCAGGAGTCAGGCTaGGATATATTCCTACCTGAG +
Preference number: 5 (lower is better)
Translates to: GFVLFQCFLPLRQQVLNHPQESG*DIFLPE
Trigger: CTCAGGTAGGAATATATCCAAGCCTGACTCCTGCGG...GTGATTCAGCACCTGCTGTCTGAGCGGGAGGAAGCACTGAAACAACACAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTCTGAAATGCTGGTTTaGGAGGTTTCTCCTCATATT +
Preference number: 5 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTSEMLV*EVSPHI
Trigger: AATATGAGGAGAAACCTCCAAAACCAGCATTTCAGA...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATTTCTCGAAGGACCTTTaGGAGGAGTTTTCATCAAGT +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDFSKDL*EEFSSS
Trigger: ACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGAA...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGGTCAATGCCTCAAACTaGGTATTACCACAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRVNASN*VLPQAR
Trigger: TCTTGCCTGTGGTAATACCAAGTTTGAGGCATTGAC...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATTGCGCAGCATTTAAGTaGTCAAACTGCTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDCAAFK*SNCSCN
Trigger: ATTGCAAGAGCAGTTTGACAACTTAAATGCTGCGCA...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGACCAATGCTGTGTTGTaGTCCACCAGTTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPTNAVL*STSFSI
Trigger: AATGGAGAAACTGGTGGACAACAACACAGCATTGGT...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATTGGAAACGCTTCAATTaGTCAACCAATGCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDWKRFN*STNAVL
Trigger: CAACACAGCATTGGTTGACAAATTGAAGCGTTTCCA...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCCGTGGAAAGCTGCCTaGAGATTGCCATGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWPWKAA*RLPCAC
Trigger: ACAAGCACATGGCAATCTCAAGGCAGCTTTCCACGG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACTTCTCCAGCGACTCTaGCAGAACAGCCTGCTCCGT +
Preference number: 5 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKLLQRL*QNSLLR
Trigger: ACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAAG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCTACACAGGTCCCCATaGTGCAGTTTCCACAGAAGC +
Preference number: 5 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWLHRSP*CSFHRS
Trigger: GCTTCTGTGGAAACTGCACAATGGGGACCTGTGTAG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAGGAGCCCGAATTCCTaGGTGACTGCAAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPRSPNS*VTAKGW
Trigger: CCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCT...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGAGGAGCCCGAATTCCTaGGTGACTGCAAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWRSPNS*VTAKGW
Trigger: CCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCT...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAGAGAGTCTGTGGACTTaGGGGAGGTGTCATCTGGGT +
Preference number: 5 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRESLWT*GRCHLG
Trigger: ACCCAGATGACACCTCCCCAAAGTCCACAGACTCTC...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTGTAGAAGGTTTGCTTTaGTGGCTCTGGATGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGVEGLL*WLWMVE
Trigger: CTCCACCATCCAGAGCCACAAAAGCAAACCTTCTAC...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGGAAGGAGCCCGAATTCCTTGGTGACTGCAAAGGGATGGCGGAGGATGTGGGGCATATTCCTTTATCCTaGTCCCAGAGAAAAGTAGGT +
Preference number: 5 (lower is better)
Translates to: GKEPEFLGDCKGMAEDVGHIPLS*SQRKVG
Trigger: ACCTACTTTTCTCTGGGACAAGGATAAAGGAATATG...CCCCACATCCTCCGCCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCACTTTGGCTAATGTCATaGAGAACAACTTGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPLWLMS*RTTWKR
Trigger: ACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAG...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACATGGCAAACCCAACTTaGGCTAATGTCATTGAGAAC +
Preference number: 5 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHMANPT*ANVIEN
Trigger: GTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCAT...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATGTGGATAAGGAGAATTaGGGAGACAACAACATGTCT +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDVDKEN*GDNNMS
Trigger: AGACATGTTGTTGTCTCCCAAATTCTCCTTATCCAC...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS TCA 90 bp TGTTGTCTTGAATTCACTGATGAGGGTGATGAGGCACTGGTCTGCTaGGGTCTGGGCGTGACCTTTGATAAAGCAGCATCTTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: CCLEFTDEGDEALVC*GLGVTFDKAASLGC
Trigger: GCAGCCCAAAGATGCTGCTTTATCAAAGGTCACGCCCAGACCTCAGCAGACCAGTGCCTCATCACCCTCATCAGTGAATTCAAGACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS GCA 90 bp CCCCCGAAGTGTGATATAAAGTCGACTTACAATTGTTGCTGTAAGTaGTCAGCTCACTGTGGGTGCTGGCTATTGAGGGGGTGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: PPKCDIKSTYNCCCK*SAHCGCWLLRGCFL
Trigger: CAGGAAGCACCCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCACTTACAGCAACAATTGTAAGTCGACTTTATATCACACTTCGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523718.5
CDS-3UTR CAA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGTGTAATGCAGAATCATaGGGGACTTCCATGCCATCA +
Preference number: 5 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPCNAES*GTSMPS
Trigger: TGATGGCATGGAAGTCCCCAATGATTCTGCATTACA...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCCAAATCCTTTCCTTaGGAGACCATTTGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPPKSFP*ETICVS
Trigger: AGACACACAAATGGTCTCCAAAGGAAAGGATTTGGG...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCATCAGTTTTTCTAACTTaGCAGCCTATTGGGGTATTC +
Preference number: 5 (lower is better)
Translates to: FLQSSSLRSCDSAGGDAPSVFLT*QPIGVF
Trigger: GAATACCCCAATAGGCTGCAAAGTTAGAAAAACTGA...TGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTATTTCACGGCAGATGTaGTTCTTGGAACCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGISRQM*FLEPCV
Trigger: CACACAGGGTTCCAAGAACAACATCTGCCGTGAAAT...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGCTTTTCAAAGATGCTTaGGATTTAGGAAGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTLFKDA*DLGSGL
Trigger: TAGACCACTTCCTAAATCCAAAGCATCTTTGAAAAG...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATTCTGAAATGCTGGTTTaGGAGGTTTCTCCTCATATT +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDSEMLV*EVSPHI
Trigger: AATATGAGGAGAAACCTCCAAAACCAGCATTTCAGA...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTTCTGAAATGCTGGTTTaGGAGGTTTCTCCTCATATT +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDASEMLV*EVSPHI
Trigger: AATATGAGGAGAAACCTCCAAAACCAGCATTTCAGA...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATATTCTCGAAGGACCTTTaGGAGGAGTTTTCATCAAGT +
Preference number: 5 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIFSKDL*EEFSSS
Trigger: ACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGAA...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTCTTGCAATTGCATTTaGTACTTCTCTGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: EAAIPPVVTLQLPYGDHTSCNCI*YFSASS
Trigger: TGAAGAAGCAGAGAAGTACAAAATGCAATTGCAAGA...CGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATTCACTCTTCAGATCATaGATTTGCTTCTCTAGCGAT +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDSLFRS*ICFSSD
Trigger: ATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTGA...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTTGCAGTTTCTCATTCTaGATCTCTAACACAGCTTTC +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDACSFSF*ISNTAF
Trigger: GAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGCA...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATTGCAGTTTCTCATTCTaGATCTCTAACACAGCTTTC +
Preference number: 5 (lower is better)
Translates to: VSEAAIPPVVTLQLPYGDCSFSF*ISNTAF
Trigger: GAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGCA...ATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGAAACGCTTCAATTaGTCAACCAATGCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRWKRFN*STNAVL
Trigger: CAACACAGCATTGGTTGACAAATTGAAGCGTTTCCA...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGTGGAAACGCTTCAATTaGTCAACCAATGCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPWKRFN*STNAVL
Trigger: CAACACAGCATTGGTTGACAAATTGAAGCGTTTCCA...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGAGGAGCCCGAATTCCTaGGTGACTGCAAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKRSPNS*VTAKGW
Trigger: CCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCT...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCATATTCCTTTATCCTaGTCCCAGAGAAAAGTAGGT +
Preference number: 5 (lower is better)
Translates to: VFLQSSSLRSCDSAGGDAHIPLS*SQRKVG
Trigger: ACCTACTTTTCTCTGGGACAAGGATAAAGGAATATG...AGCGTCACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGCTTTGGCTAATGTCATaGAGAACAACTTGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRLWLMS*RTTWKR
Trigger: ACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAG...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGGCTTCGAGGATTCTTTaGCCTGCTCTTTTCAACTGT +
Preference number: 5 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPASRIL*PALFNC
Trigger: ACAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAGC...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS TCA 90 bp TTCAAGGATGTAGGCTTTCCAGAACTGGACACACGCCTGATCCTCTaGGGAGATACGGCTCGATCAGCACTGGGATTTCTATTGTCACTG +
Preference number: 5 (lower is better)
Translates to: FKDVGFPELDTRLIL*GDTARSALGFLLSL
Trigger: CAGTGACAATAGAAATCCCAGTGCTGATCGAGCCGTATCTCCTCAGAGGATCAGGCGTGTGTCCAGTTCTGGAAAGCCTACATCCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000523718.5
CDS GCA 90 bp TCCTTGCTGAAGGTCACACAGCCGGTTCTTAGCACTCATCCACGCTaGTCTGTAAGATGCAACTGGTTTAGTAGAAAGACTGTGAGCGAC +
Preference number: 5 (lower is better)
Translates to: SLLKVTQPVLSTHPR*SVRCNWFSRKTVSD
Trigger: GTCGCTCACAGTCTTTCTACTAAACCAGTTGCATCTTACAGAGCAGCGTGGATGAGTGCTAAGAACCGGCTGTGTGACCTTCAGCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS CCA 90 bp CAGCCGGTTCTTAGCACTCATCCACGCTGCTCTGTAAGATGCAACTaGTTTAGTAGAAAGACTGTGAGCGACACTGCCGATTCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: QPVLSTHPRCSVRCN*FSRKTVSDTADSVL
Trigger: CAGAACAGAATCGGCAGTGTCGCTCACAGTCTTTCTACTAAACCAGTTGCATCTTACAGAGCAGCGTGGATGAGTGCTAAGAACCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS-3UTR CAA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAGAATGTGGTTCGCTATaGGATTCATCATGGGATAAA +
Preference number: 5 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIECGSL*DSSWDK
Trigger: TTTATCCCATGATGAATCCAATAGCGAACCACATTC...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCTCTGGGTTCAGCACTaGAGCTTCGCTCTTATCAAA +
Preference number: 5 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWLWVQH*SFALIK
Trigger: TTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGAG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTCAGTTTTTCTAACTTaGCAGCCTATTGGGGTATTC +
Preference number: 5 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRSVFLT*QPIGVF
Trigger: GAATACCCCAATAGGCTGCAAAGTTAGAAAAACTGA...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCCGCAGGAGTCAGGCTaGGATATATTCCTACCTGAG +
Preference number: 5 (lower is better)
Translates to: HLEDELALGLWKIIFLYPPQESG*DIFLPE
Trigger: CTCAGGTAGGAATATATCCAAGCCTGACTCCTGCGG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATATCTGAAATGCTGGTTTaGGAGGTTTCTCCTCATATT +
Preference number: 5 (lower is better)
Translates to: PPVVTLQLPYGDHTCADISEMLV*EVSPHI
Trigger: AATATGAGGAGAAACCTCCAAAACCAGCATTTCAGA...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATAAAACTGCTCTTGCAATaGCATTTTGTACTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: PPVVTLQLPYGDHTCADIKLLLQ*HFVLLC
Trigger: GCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTTT...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGTCACTCTTCAGATCATaGATTTGCTTCTCTAGCGAT +
Preference number: 5 (lower is better)
Translates to: RRQKSSSRVPVSEAAIPPSLFRS*ICFSSD
Trigger: ATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTGA...CGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGTCAACCAATGCTGTGTaGTTGTCCACCAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWSTNAV*LSTSFS
Trigger: GGAGAAACTGGTGGACAACAACACAGCATTGGTTGA...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTTGGAAACGCTTCAATTaGTCAACCAATGCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGWKRFN*STNAVL
Trigger: CAACACAGCATTGGTTGACAAATTGAAGCGTTTCCA...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCCGTGGAAAGCTGCCTaGAGATTGCCATGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKPWKAA*RLPCAC
Trigger: ACAAGCACATGGCAATCTCAAGGCAGCTTTCCACGG...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CCACAGAAGCTCCTCGTTTTCCATAGAGAGTCGCTTGTTGACTTTCGACTCCTTCTACACAGGTCCCCATaGTGCAGTTTCCACAGAAGC +
Preference number: 5 (lower is better)
Translates to: PQKLLVFHRESLVDFRLLLHRSP*CSFHRS
Trigger: GCTTCTGTGGAAACTGCACAATGGGGACCTGTGTAG...AAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGAAAACGAGGAGCTTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TCAGAAGCTGCGATTCCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACTTTTCTTCTATGGCTTaGGCTGAAATGTATATGCTG +
Preference number: 5 (lower is better)
Translates to: SEAAIPPVVTLQLPYGDHFSSMA*AEMYML
Trigger: CAGCATATACATTTCAGCCAAAGCCATAGAAGAAAA...GTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGGAATCGCAGCTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCTTTGGCTAATGTCATaGAGAACAACTTGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPLWLMS*RTTWKR
Trigger: ACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAG...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGATGGCAAACCCAACTTaGGCTAATGTCATTGAGAAC +
Preference number: 5 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPMANPT*ANVIEN
Trigger: GTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCAT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGCTTTCTCGGCCCCGCTaGCTTCTGCTGAGAAGGGGC +
Preference number: 5 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKLSRPR*LLLRRG
Trigger: GCCCCTTCTCAGCAGAAGCAAGCGGGGCCGAGAAAG...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381869.5
CDS TCA 90 bp AAAGCAGCTTTTGGCAAAACAGAACTGGACACACGCCTGATCCTCTaGGGAGATACGGCTCGATCAGCACTGGGATTTCTATTGTCACTG +
Preference number: 5 (lower is better)
Translates to: KAAFGKTELDTRLIL*GDTARSALGFLLSL
Trigger: CAGTGACAATAGAAATCCCAGTGCTGATCGAGCCGTATCTCCTCAGAGGATCAGGCGTGTGTCCAGTTCTGTTTTGCCAAAAGCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS GCA 90 bp TTTCCACAACCCCCGAAGTGTGATATAAAGTCGACTTACAATTGTTaGTGTAAGTGCTCAGCTCACTGTGGGTGCTGGCTATTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: FPQPPKCDIKSTYNC*CKCSAHCGCWLLRG
Trigger: CCCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCACTTACAGCAACAATTGTAAGTCGACTTTATATCACACTTCGGGGGTTGTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523718.5
CDS-3UTR CAA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGCTCTGGGTTCAGCACTaGAGCTTCGCTCTTATCAAA +
Preference number: 5 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLLWVQH*SFALIK
Trigger: TTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGAG...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CCACAGAAGCTCCTCGTTTTCCATAGAGAGTCGCTTGTTGACTTTCGACTCCTTCGGCAGATGTTGTTCTaGGAACCCTGTGTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: PQKLLVFHRESLVDFRLLRQMLF*EPCVKH
Trigger: ATGCTTCACACAGGGTTCCAAGAACAACATCTGCCG...AAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGAAAACGAGGAGCTTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTTTTGGAGCAGCTATTaGCCTCAAACCGCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: HLEDELALGLWKIIFLYPFWSSY*PQTAGV
Trigger: GACTCCTGCGGTTTGAGGCAAATAGCTGCTCCAAAA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGTTTTGGAGCAGCTATTaGCCTCAAACCGCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKFWSSY*PQTAGV
Trigger: GACTCCTGCGGTTTGAGGCAAATAGCTGCTCCAAAA...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCGCACTGGGATTTCTATaGTCACTGTTCCGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: CNLEESWTSHIFHSWERSALGFL*SLFRLK
Trigger: TTTGAGGCGGAACAGTGACAATAGAAATCCCAGTGC...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAGCACTGGGATTTCTATaGTCACTGTTCCGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRALGFL*SLFRLK
Trigger: TTTGAGGCGGAACAGTGACAATAGAAATCCCAGTGC...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATACTTTTCAAAGATGCTTaGGATTTAGGAAGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: PPVVTLQLPYGDHTCADILFKDA*DLGSGL
Trigger: TAGACCACTTCCTAAATCCAAAGCATCTTTGAAAAG...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTTGTGGGTGCTGGCTATaGAGGGGGTGCTTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: DCFLLSSTASSVSTESYLCGCWL*RGCFLS
Trigger: GGACAGGAAGCACCCCCTCAATAGCCAGCACCCACA...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000520196.5
CDS-3UTR CAA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGGGTTTCTCCTCATATTaGATGACAGCGGCATTACCA +
Preference number: 5 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWGFSSY*MTAALP
Trigger: TGGTAATGCCGCTGTCATCAAATATGAGGAGAAACC...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTTCTGAAATGCTGGTTTaGGAGGTTTCTCCTCATATT +
Preference number: 5 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGSEMLV*EVSPHI
Trigger: AATATGAGGAGAAACCTCCAAAACCAGCATTTCAGA...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTTTCTCGAAGGACCTTTaGGAGGAGTTTTCATCAAGT +
Preference number: 5 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGFSKDL*EEFSSS
Trigger: ACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGAA...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAGCTTCGAGGATTCTTTaGCCTGCTCTTTTCAACTGC +
Preference number: 5 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRASRIL*PALFNC
Trigger: GCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAGC...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGGTCAATGCCTCAAACTaGGTATTACCACAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWVNASN*VLPQAR
Trigger: TCTTGCCTGTGGTAATACCAAGTTTGAGGCATTGAC...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CCGCCGGTGGTGACGCTCCAGTTACCCTACGGTGATCACACGTGTGCTGATATATCTTGCAATTGCATTTaGTACTTCTCTGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: PPVVTLQLPYGDHTCADISCNCI*YFSASS
Trigger: TGAAGAAGCAGAGAAGTACAAAATGCAATTGCAAGA...TATATCAGCACACGTGTGATCACCGTAGGGTAACTGGAGCGTCACCACCGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTCTTGCAATTGCATTTaGTACTTCTCTGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GGKSLPPEFQSQKLRFRRSCNCI*YFSASS
Trigger: TGAAGAAGCAGAGAAGTACAAAATGCAATTGCAAGA...CCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGAAACTGCTCTTGCAATaGCATTTTGTACTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: GRRQKSSSRVPVSEAAIPKLLLQ*HFVLLC
Trigger: GCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTTT...CGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCTGCGATTCCGCCGGTGGTTGCAGTTTCTCATTCTaGATCTCTAACACAGCTTTC +
Preference number: 5 (lower is better)
Translates to: AKVFLQSSSLRSCDSAGGCSFSF*ISNTAF
Trigger: GAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGCA...ACCACCGGCGGAATCGCAGCTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCTCAACCAATGCTGTGTaGTTGTCCACCAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: CNLEESWTSHIFHSWERSSTNAV*LSTSFS
Trigger: GGAGAAACTGGTGGACAACAACACAGCATTGGTTGA...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGCCGTGGAAAGCTGCCTaGAGATTGCCATGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: KEADHSATFPKTKGLLKGPWKAA*RLPCAC
Trigger: ACAAGCACATGGCAATCTCAAGGCAGCTTTCCACGG...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAATAGAGAGTCGCTTGTaGACTTTCGACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRIESRL*TFDSFS
Trigger: GGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTAT...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGATAGAGAGTCGCTTGTaGACTTTCGACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLIESRL*TFDSFS
Trigger: GGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTAT...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGATAGAGAGTCGCTTGTaGACTTTCGACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWIESRL*TFDSFS
Trigger: GGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTAT...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCATCCATAGAGAGTCGCTaGTTGACTTTCGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPSIESR*LTFDSF
Trigger: GAAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGA...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCTCCATAGAGAGTCGCTaGTTGACTTTCGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: CNLEESWTSHIFHSWERSSIESR*LTFDSF
Trigger: GAAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGA...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGCTACACAGGTCCCCATaGTGCAGTTTCCACAGAAGC +
Preference number: 5 (lower is better)
Translates to: KEADHSATFPKTKGLLKGLHRSP*CSFHRS
Trigger: GCTTCTGTGGAAACTGCACAATGGGGACCTGTGTAG...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACATGCCCACGTTCCTCCTaGGGGTCAGTCCTGCAGACC +
Preference number: 5 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTCPRSS*GSVLQT
Trigger: GGTCTGCAGGACTGACCCCAAGGAGGAACGTGGGCA...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: AGSGALENHIPLSLSQRKVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGCGTTCTTTAAGTGCTTaGTGCAACAACGTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLRSLSA*CNNVRV
Trigger: GACACGGACGTTGTTGCACAAAGCACTTAAAGAACG...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGGTAGAAGGTTTGCTTTaGTGGCTCTGGATGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKVEGLL*WLWMVE
Trigger: CTCCACCATCCAGAGCCACAAAAGCAAACCTTCTAC...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTCAGGCTTTAGTTTATTaGGAAAGTGGTTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGQALVY*ESGFST
Trigger: GGTGCTGAAACCACTTTCCAAATAAACTAAAGCCTG...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TCATGGACAGCATCCTTTCAACTTCATACTCACTACTCACAAACCAACCCTTGGGTGCTTCCTCCCGCCTaGTTGCTGCACATGGAGAAT +
Preference number: 5 (lower is better)
Translates to: SWTASFQLHTHYSQTNPWVLPPA*LLHMEN
Trigger: ATTCTCCATGTGCAGCAACAAGGCGGGAGGAAGCAC...CCAAGGGTTGGTTTGTGAGTAGTGAGTATGAAGTTGAAAGGATGCTGTCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS TCA 90 bp GGCAAAGATGGCTCAACACTCTGGCCCTCAACTGCTTCTAGGGAATaGCAACTGTGTTGCAGATATTTGGGCTTCTCAGTACCTACAAGT +
Preference number: 5 (lower is better)
Translates to: GKDGSTLWPSTASRE*QLCCRYLGFSVPTS
Trigger: ACTTGTAGGTACTGAGAAGCCCAAATATCTGCAACACAGTTGTCATTCCCTAGAAGCAGTTGAGGGCCAGAGTGTTGAGCCATCTTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000523718.5
CDS TCA 90 bp GCTCTTTTCAACTGTGTGGAAAACAACAGTGCTTCTCCTAAACCCTaGAGGAAGTCGAAGGTTTCGAAGCAATCCTTTGGCCGTCAGTCG +
Preference number: 5 (lower is better)
Translates to: ALFNCVENNSASPKP*RKSKVSKQSFGRQS
Trigger: CGACTGACGGCCAAAGGATTGCTTCGAAACCTTCGACTTCCTTCAGGGTTTAGGAGAAGCACTGTTGTTTTCCACACAGTTGAAAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS GCA 90 bp AGGGCTGGCCAAGTGTTTCTGGCTTCCGTTTTCACTTTCAGATGTTaGCAAAATGATGCTCTTCCTCTGAATACAATCTCCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RAGQVFLASVFTFRC*QNDALPLNTISLLQ
Trigger: CTGCAGGAGGGAGATTGTATTCAGAGGAAGAGCATCATTTTGGCAACATCTGAAAGTGAAAACGGAAGCCAGAAACACTTGGCCAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS CCA 90 bp ATCCTTTGGCCGTCAGTCGTATGTGAATGGTGGATAAGGAGAATTTaGGAGACAACAACATGTCTTCGGAGCAGGTGGCGAGATTTCACA +
Preference number: 5 (lower is better)
Translates to: ILWPSVVCEWWIRRI*ETTTCLRSRWRDFT
Trigger: TGTGAAATCTCGCCACCTGCTCCGAAGACATGTTGTTGTCTCCCAAATTCTCCTTATCCACCATTCACATACGACTGACGGCCAAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS CCA 90 bp GAAGGTTTCGAAGCAATCCTTTGGCCGTCAGTCGTATGTGAATGGTaGATAAGGAGAATTTGGGAGACAACAACATGTCTTCGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: EGFEAILWPSVVCEW*IRRIWETTTCLRSR
Trigger: CCTGCTCCGAAGACATGTTGTTGTCTCCCAAATTCTCCTTATCCACCATTCACATACGACTGACGGCCAAAGGATTGCTTCGAAACCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS CCA 90 bp GTCGAAGGTTTCGAAGCAATCCTTTGGCCGTCAGTCGTATGTGAATaGTGGATAAGGAGAATTTGGGAGACAACAACATGTCTTCGGAGC +
Preference number: 5 (lower is better)
Translates to: VEGFEAILWPSVVCE*WIRRIWETTTCLRS
Trigger: GCTCCGAAGACATGTTGTTGTCTCCCAAATTCTCCTTATCCACCATTCACATACGACTGACGGCCAAAGGATTGCTTCGAAACCTTCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTTTTGGCCCATTTCCTaGTGCCTGTATGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: HLEDELALGLWKIIFLYPFWPIS*CLYELC
Trigger: ACAGAGCTCATACAGGCACAAGGAAATGGGCCAAAA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCATCCTTTGGAGACCATTaGTGTGTCTTCAGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPSFGDH*CVFSLS
Trigger: ACTGAGACTGAAGACACACAAATGGTCTCCAAAGGA...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCACCCAAATCCTTTCCTTaGGAGACCATTTGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPPKSFP*ETICVS
Trigger: AGACACACAAATGGTCTCCAAAGGAAAGGATTTGGG...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGGTTCTAGGACTGGTGTaGACATGCACATCGTTTTGT +
Preference number: 5 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLVLGLV*TCTSFC
Trigger: ACAAAACGATGTGCATGTCAACACCAGTCCTAGAAC...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGCAGAAAAGGTTACTTTaGTGGGTTCTAGGACTGGTG +
Preference number: 5 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLQKRLL*WVLGLV
Trigger: CACCAGTCCTAGAACCCACAAAAGTAACCTTTTCTG...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAGCACTGGGATTTCTATaGTCACTGTTCCGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKALGFL*SLFRLK
Trigger: TTTGAGGCGGAACAGTGACAATAGAAATCCCAGTGC...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGGCACTGGGATTTCTATaGTCACTGTTCCGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKALGFL*SLFRLK
Trigger: TTTGAGGCGGAACAGTGACAATAGAAATCCCAGTGC...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
CDS-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGGCTTCGAGGATTCTTTaGCCTGCTCTTTTCAACTGC +
Preference number: 5 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKASRIL*PALFNC
Trigger: GCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAGC...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGATGCGCAGCATTTAAGTaGTCAAACTGCTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGCAAFK*SNCSCN
Trigger: ATTGCAAGAGCAGTTTGACAACTTAAATGCTGCGCA...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAACCAATGCTGTGTTGTaGTCCACCAGTTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRTNAVL*STSFSI
Trigger: AATGGAGAAACTGGTGGACAACAACACAGCATTGGT...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCGAGATTGCCATGTGCTaGTCCATCCGAGCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFEIAMC*SIRAFN
Trigger: ATTGAAAGCTCGGATGGACAAGCACATGGCAATCTC...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAGAGATTGCCATGTGCTaGTCCATCCGAGCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKEIAMC*SIRAFN
Trigger: ATTGAAAGCTCGGATGGACAAGCACATGGCAATCTC...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAAACGCTTCAATTTGTCAACCAATGCTGTGTTGTTGTCCACCAGTTTCTCCACCGTGGAAAGCTGCCTaGAGATTGCCATGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GNASICQPMLCCCPPVSPPWKAA*RLPCAC
Trigger: ACAAGCACATGGCAATCTCAAGGCAGCTTTCCACGG...TGGAGAAACTGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTATAGAGAGTCGCTTGTaGACTTTCGACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HLEDELALGLWKIIFLYPIESRL*TFDSFS
Trigger: GGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTAT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTAGAAGGTTTGCTTTaGTGGCTCTGGATGGTGGAG +
Preference number: 5 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILVEGLL*WLWMVE
Trigger: CTCCACCATCCAGAGCCACAAAAGCAAACCTTCTAC...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGCAACCTGGAGGAGAGTaGGACAAGCCACATTTTCCA +
Preference number: 5 (lower is better)
Translates to: KEADHSATFPKTKGLLKGQPGGE*DKPHFP
Trigger: TGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTG...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACCAACCTGGAGGAGAGTaGGACAAGCCACATTTTCCA +
Preference number: 5 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHQPGGE*DKPHFP
Trigger: TGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTG...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAATGGCAAACCCAACTTaGGCTAATGTCATTGAGAAC +
Preference number: 5 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGMANPT*ANVIEN
Trigger: GTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCAT...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS TCA 90 bp GGAAGTCGAAGGTTTCGAAGCAATCCTTTGGCCGTCAGTCGTATGTaGATGGTGGATAAGGAGAATTTGGGAGACAACAACATGTCTTCG +
Preference number: 5 (lower is better)
Translates to: GSRRFRSNPLAVSRM*MVDKENLGDNNMSS
Trigger: CGAAGACATGTTGTTGTCTCCCAAATTCTCCTTATCCACCATTCACATACGACTGACGGCCAAAGGATTGCTTCGAAACCTTCGACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS CCA 90 bp GCATCGACATTTCACAGCAACACTGCTGTGCAGGAGCACTTGGGGTaGATCCTTTACTGTGGATTACAAGATAGAAACTTGTACTTGCCA +
Preference number: 5 (lower is better)
Translates to: ASTFHSNTAVQEHLG*ILYCGLQDRNLYLP
Trigger: TGGCAAGTACAAGTTTCTATCTTGTAATCCACAGTAAAGGATCCACCCCAAGTGCTCCTGCACAGCAGTGTTGCTGTGAAATGTCGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS-3UTR CAA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGAGGTTTTTCAGCACAGTaGAAAGGTTTTCAGTCTAAG +
Preference number: 5 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGGFSAQ*KGFQSK
Trigger: CTTAGACTGAAAACCTTTCAACTGTGCTGAAAAACC...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CAA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGGGTTTTTCAGCACAGTaGAAAGGTTTTCAGTCTAAG +
Preference number: 5 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWGFSAQ*KGFQSK
Trigger: CTTAGACTGAAAACCTTTCAACTGTGCTGAAAAACC...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
CDS-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCCCTGCACAGTTCAAATaGTCATTAGGCTTCCACACA +
Preference number: 5 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFPAQFK*SLGFHT
Trigger: TGTGTGGAAGCCTAATGACAATTTGAACTGTGCAGG...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR CAA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTTTTGGCCCATTTCCTaGTGCCTGTATGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHFWPIS*CLYELC
Trigger: ACAGAGCTCATACAGGCACAAGGAAATGGGCCAAAA...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGCTCTGGGTTCAGCACTaGAGCTTCGCTCTTATCAAA +
Preference number: 5 (lower is better)
Translates to: KEADHSATFPKTKGLLKGLWVQH*SFALIK
Trigger: TTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGAG...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCCCCAAATCCTTTCCTTaGGAGACCATTTGTGTGTCT +
Preference number: 5 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFPKSFP*ETICVS
Trigger: AGACACACAAATGGTCTCCAAAGGAAAGGATTTGGG...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCGACATGCACATCGTTTaGTCTGTGCTAATGACCATA +
Preference number: 5 (lower is better)
Translates to: CNLEESWTSHIFHSWERSDMHIV*SVLMTI
Trigger: TATGGTCATTAGCACAGACAAAACGATGTGCATGTC...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCCAGAAAAGGTTACTTTaGTGGGTTCTAGGACTGGTG +
Preference number: 5 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFQKRLL*WVLGLV
Trigger: CACCAGTCCTAGAACCCACAAAAGTAACCTTTTCTG...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTCAGAAAAGGTTACTTTaGTGGGTTCTAGGACTGGTG +
Preference number: 5 (lower is better)
Translates to: HLEDELALGLWKIIFLYPQKRLL*WVLGLV
Trigger: CACCAGTCCTAGAACCCACAAAAGTAACCTTTTCTG...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAGGTTTCTCCTCATATTaGATGACAGCGGCATTACCA +
Preference number: 5 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKGFSSY*MTAALP
Trigger: TGGTAATGCCGCTGTCATCAAATATGAGGAGAAACC...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCTTCTCGAAGGACCTTTaGGAGGAGTTTTCATCAAGT +
Preference number: 5 (lower is better)
Translates to: CNLEESWTSHIFHSWERSFSKDL*EEFSSS
Trigger: ACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGAA...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCATTCTCGAAGGACCTTTaGGAGGAGTTTTCATCAAGT +
Preference number: 5 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPFSKDL*EEFSSS
Trigger: ACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGAA...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGGTCAATGCCTCAAACTaGGTATTACCACAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKVNASN*VLPQAR
Trigger: TCTTGCCTGTGGTAATACCAAGTTTGAGGCATTGAC...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCTCTTCCTGTTATACCCTCTCCCTACCCTGTTACAGGGCTGAGCAGAGTTGGTTCTTGCAATTGCATTTaGTACTTCTCTGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ALPVIPSPYPVTGLSRVGSCNCI*YFSASS
Trigger: TGAAGAAGCAGAGAAGTACAAAATGCAATTGCAAGA...ACCAACTCTGCTCAGCCCTGTAACAGGGTAGGGAGAGGGTATAACAGGAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGTGCGCAGCATTTAAGTaGTCAAACTGCTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLCAAFK*SNCSCN
Trigger: ATTGCAAGAGCAGTTTGACAACTTAAATGCTGCGCA...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGTCAACCAATGCTGTGTaGTTGTCCACCAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: KEADHSATFPKTKGLLKGSTNAV*LSTSFS
Trigger: GGAGAAACTGGTGGACAACAACACAGCATTGGTTGA...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCAACCAATGCTGTGTaGTTGTCCACCAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHSTNAV*LSTSFS
Trigger: GGAGAAACTGGTGGACAACAACACAGCATTGGTTGA...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTTCAACCAATGCTGTGTaGTTGTCCACCAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILSTNAV*LSTSFS
Trigger: GGAGAAACTGGTGGACAACAACACAGCATTGGTTGA...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAATCCATAGAGAGTCGCTaGTTGACTTTCGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: AGSGALENHIPLSLSQRKSIESR*LTFDSF
Trigger: GAAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGA...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTAGGAGCCCGAATTCCTaGGTGACTGCAAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: DCFLLSSTASSVSTESYLRSPNS*VTAKGW
Trigger: CCATCCCTTTGCAGTCACCAAGGAATTCGGGCTCCT...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACCGTTCTTTAAGTGCTTaGTGCAACAACGTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHRSLSA*CNNVRV
Trigger: GACACGGACGTTGTTGCACAAAGCACTTAAAGAACG...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TCCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGCATATTCCTTTATCCTaGTCCCAGAGAAAAGTAGGT +
Preference number: 5 (lower is better)
Translates to: SLGSVLQTCIKMLSESLWHIPLS*SQRKVG
Trigger: ACCTACTTTTCTCTGGGACAAGGATAAAGGAATATG...CCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCCAGGCTTTAGTTTATTaGGAAAGTGGTTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: CNLEESWTSHIFHSWERSQALVY*ESGFST
Trigger: GGTGCTGAAACCACTTTCCAAATAAACTAAAGCCTG...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GACACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCACAGGCTTTAGTTTATTaGGAAAGTGGTTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: DTCREGEIKQQFFLPPFPQALVY*ESGFST
Trigger: GGTGCTGAAACCACTTTCCAAATAAACTAAAGCCTG...TGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGCAGGCTTTAGTTTATTaGGAAAGTGGTTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWQALVY*ESGFST
Trigger: GGTGCTGAAACCACTTTCCAAATAAACTAAAGCCTG...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAAACGCTTCAATTTGTCAACCAATGCTGTGTTGTTGTCCACCAGTTTCTCCACAACCTGGAGGAGAGTaGGACAAGCCACATTTTCCA +
Preference number: 5 (lower is better)
Translates to: GNASICQPMLCCCPPVSPQPGGE*DKPHFP
Trigger: TGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTG...TGGAGAAACTGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGCTTTGGCTAATGTCATaGAGAACAACTTGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWLWLMS*RTTWKR
Trigger: ACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAG...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGACTTTGATGGCAAACCCAACTTaGGCTAATGTCATTGAGAAC +
Preference number: 5 (lower is better)
Translates to: GSVLQTCIKMLSESLWTLMANPT*ANVIEN
Trigger: GTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCAT...CAAAGTCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CCAACCCTTGGAAGTACAACGGATTTACTGTTTATCAAGAGGGGAAACTTTCACCTTCCTCCCGCCTTGTaGCTGCACATGGAGAATAGA +
Preference number: 5 (lower is better)
Translates to: PTLGSTTDLLFIKRGNFHLPPAL*LHMENR
Trigger: TCTATTCTCCATGTGCAGCAACAAGGCGGGAGGAAG...GTGAAAGTTTCCCCTCTTGATAAACAGTAAATCCGTTGTACTTCCAAGGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS-3UTR CAA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGATGAGAAAGCAGCTTTaGGCAAAACAGAACTGGACA +
Preference number: 5 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWMRKQL*AKQNWT
Trigger: TGTCCAGTTCTGTTTTGCCAAAAGCTGCTTTCTCAT...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS TCA 90 bp TGTGTGTCTTCAGTCTCAGTGACTTTATGCTCTGGGTTCAGCACTTaGGCTTCGCTCTTATCAAAAGCTGGCACCATTAAAGGGCATTCA +
Preference number: 5 (lower is better)
Translates to: CVSSVSVTLCSGFST*ASLLSKAGTIKGHS
Trigger: TGAATGCCCTTTAATGGTGCCAGCTTTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGAGCATAAAGTCACTGAGACTGAAGACACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 90 bp CCCACCTTTTGTCCTGGCGGGCTACTTAGAATCAATTCTGAGGTATaGTTTTGGGTTCCCAAATCCTTTCCTTTGGAGACCATTTGTGTG +
Preference number: 5 (lower is better)
Translates to: PTFCPGGLLRINSEV*FWVPKSFPLETICV
Trigger: CACACAAATGGTCTCCAAAGGAAAGGATTTGGGAACCCAAAATCATACCTCAGAATTGATTCTAAGTAGCCCGCCAGGACAAAAGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 90 bp GTCTCGCATGCTGAGTTAGAAGAACTGGCTTTGTCAACATCTTCCTaGTTCGATTTCACGGCAGATGTTGTTCTTGGAACCCTGTGTGAA +
Preference number: 5 (lower is better)
Translates to: VSHAELEELALSTSS*FDFTADVVLGTLCE
Trigger: TTCACACAGGGTTCCAAGAACAACATCTGCCGTGAAATCGAATCAGGAAGATGTTGACAAAGCCAGTTCTTCTAACTCAGCATGCGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS GCA 90 bp CTACAAGTCTGCCTGGAGCCAGTCACTTTTACACATTATCACCTCTaGCTGACTTTGGGCAACTCTATTTTTGTGGTGAGAAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LQVCLEPVTFTHYHL*LTLGNSIFVVRKSL
Trigger: CAAGGACTTTCTCACCACAAAAATAGAGTTGCCCAAAGTCAGGCAGAGGTGATAATGTGTAAAAGTGACTGGCTCCAGGCAGACTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS CCA 90 bp TTTGGAGACCATTTGTGTGTCTTCAGTCTCAGTGACTTTATGCTCTaGGTTCAGCACTTGAGCTTCGCTCTTATCAAAAGCTGGCACCAT +
Preference number: 5 (lower is better)
Translates to: FGDHLCVFSLSDFML*VQHLSFALIKSWHH
Trigger: ATGGTGCCAGCTTTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGAGCATAAAGTCACTGAGACTGAAGACACACAAATGGTCTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CCA 90 bp TGGATAAGGAGAATTTGGGAGACAACAACATGTCTTCGGAGCAGGTaGCGAGATTTCACAGAAGAGGCAATTTCCATGGACTGTCACATA +
Preference number: 5 (lower is better)
Translates to: WIRRIWETTTCLRSR*RDFTEEAISMDCHI
Trigger: TATGTGACAGTCCATGGAAATTGCCTCTTCTGTGAAATCTCGCCACCTGCTCCGAAGACATGTTGTTGTCTCCCAAATTCTCCTTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS CCA 90 bp AAGTGGCATCGACATTTCACAGCAACACTGCTGTGCAGGAGCACTTaGGGTGGATCCTTTACTGTGGATTACAAGATAGAAACTTGTACT +
Preference number: 5 (lower is better)
Translates to: KWHRHFTATLLCRST*GGSFTVDYKIETCT
Trigger: AGTACAAGTTTCTATCTTGTAATCCACAGTAAAGGATCCACCCCAAGTGCTCCTGCACAGCAGTGTTGCTGTGAAATGTCGATGCCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS-3UTR CAA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACGGAATGACAACTGTGTaGCAGATATTTGGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHGMTTV*QIFGLL
Trigger: GAGAAGCCCAAATATCTGCAACACAGTTGTCATTCC...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR CAA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTGTAATGCAGAATCATaGGGGACTTCCATGCCATCA +
Preference number: 5 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHCNAES*GTSMPS
Trigger: TGATGGCATGGAAGTCCCCAATGATTCTGCATTACA...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCGAATGTGGTTCGCTATaGGATTCATCATGGGATAAA +
Preference number: 5 (lower is better)
Translates to: CNLEESWTSHIFHSWERSECGSL*DSSWDK
Trigger: TTTATCCCATGATGAATCCAATAGCGAACCACATTC...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTTCCTTTGGAGACCATTaGTGTGTCTTCAGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILSFGDH*CVFSLS
Trigger: ACTGAGACTGAAGACACACAAATGGTCTCCAAAGGA...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCCTTTGGAGACCATTaGTGTGTCTTCAGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHSFGDH*CVFSLS
Trigger: ACTGAGACTGAAGACACACAAATGGTCTCCAAAGGA...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CCACAGAAGCTCCTCGTTTTCCATAGAGAGTCGCTTGTTGACTTTCGACTCCTTGACATGCACATCGTTTaGTCTGTGCTAATGACCATA +
Preference number: 5 (lower is better)
Translates to: PQKLLVFHRESLVDFRLLDMHIV*SVLMTI
Trigger: TATGGTCATTAGCACAGACAAAACGATGTGCATGTC...AAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGAAAACGAGGAGCTTCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGGTTCTAGGACTGGTGTaGACATGCACATCGTTTTGT +
Preference number: 5 (lower is better)
Translates to: KEADHSATFPKTKGLLKGVLGLV*TCTSFC
Trigger: ACAAAACGATGTGCATGTCAACACCAGTCCTAGAAC...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp ATACACAGCAGAGGAGGCTGCATCAGACACATGACACTCTGTGACATCCATTTCAGACTGTTTGTTGTCTaGAATTCACTGATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: IHSRGGCIRHMTLCDIHFRLFVV*NSLMRV
Trigger: CACCCTCATCAGTGAATTCAAGACAACAAACAGTCT...GAAATGGATGTCACAGAGTGTCATGTGTCTGATGCAGCCTCCTCTGCTGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGTTTTGGAGGTTTCTCCTCATATTTGATGACAGCGGCATTACCAGAATTGTTGTACCTGAGGTGGTCGTaGTTTTTGAAGCAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: GFGGFSSYLMTAALPELLYLRWS*FLKQSP
Trigger: TGGGCTCTGCTTCAAAAACAACGACCACCTCAGGTA...CAACAATTCTGGTAATGCCGCTGTCATCAAATATGAGGAGAAACCTCCAAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAGGTTTCTCCTCATATTaGATGACAGCGGCATTACCA +
Preference number: 5 (lower is better)
Translates to: AGSGALENHIPLSLSQRKGFSSY*MTAALP
Trigger: TGGTAATGCCGCTGTCATCAAATATGAGGAGAAACC...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGGGTTTCTCCTCATATTaGATGACAGCGGCATTACCA +
Preference number: 5 (lower is better)
Translates to: KEADHSATFPKTKGLLKGGFSSY*MTAALP
Trigger: TGGTAATGCCGCTGTCATCAAATATGAGGAGAAACC...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAGTCAATGCCTCAAACTaGGTATTACCACAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: AGSGALENHIPLSLSQRKVNASN*VLPQAR
Trigger: TCTTGCCTGTGGTAATACCAAGTTTGAGGCATTGAC...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGTGCGCAGCATTTAAGTaGTCAAACTGCTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKCAAFK*SNCSCN
Trigger: ATTGCAAGAGCAGTTTGACAACTTAAATGCTGCGCA...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCTCACTCTTCAGATCATaGATTTGCTTCTCTAGCGAT +
Preference number: 5 (lower is better)
Translates to: CNLEESWTSHIFHSWERSSLFRS*ICFSSD
Trigger: ATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTGA...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGATGCAGTTTCTCATTCTaGATCTCTAACACAGCTTTC +
Preference number: 5 (lower is better)
Translates to: GGIFWTEAKVFLQSSSLRCSFSF*ISNTAF
Trigger: GAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGCA...TCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGTGCAGTTTCTCATTCTaGATCTCTAACACAGCTTTC +
Preference number: 5 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWCSFSF*ISNTAF
Trigger: GAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGCA...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAAACCAATGCTGTGTTGTaGTCCACCAGTTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: AGSGALENHIPLSLSQRKTNAVL*STSFSI
Trigger: AATGGAGAAACTGGTGGACAACAACACAGCATTGGT...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAATGGAAACGCTTCAATTaGTCAACCAATGCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKWKRFN*STNAVL
Trigger: CAACACAGCATTGGTTGACAAATTGAAGCGTTTCCA...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CCTTGGGGTCAGTCCTGCAGACCTGCATCAAAATGCTTTCAGAGAGTCTGTGGATTTTCTTCTATGGCTTaGGCTGAAATGTATATGCTG +
Preference number: 5 (lower is better)
Translates to: PWGQSCRPASKCFQRVCGFSSMA*AEMYML
Trigger: CAGCATATACATTTCAGCCAAAGCCATAGAAGAAAA...TCCACAGACTCTCTGAAAGCATTTTGATGCAGGTCTGCAGGACTGACCCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TACGGAGGACAGCAGGGAACAACACAAGATTTACCATGCCTAGGGGATGAATGGAGGTGGAAAAACCCATaGGTACTTCCCTTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: YGGQQGTTQDLPCLGDEWRWKNP*VLPFFF
Trigger: AAAGAAAAAGGGAAGTACCAATGGGTTTTTCCACCT...CCATTCATCCCCTAGGCATGGTAAATCTTGTGTTGTTCCCTGCTGTCCTCCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAACTTTGGCTAATGTCATaGAGAACAACTTGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKLWLMS*RTTWKR
Trigger: ACGCTTCCAAGTTGTTCTCAATGACATTAGCCAAAG...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CACATGCAGGGAGGGGGAGATAAAGCAACAGTTCTTCCTTCCACCTTTTCCAAAATGGCAAACCCAACTTaGGCTAATGTCATTGAGAAC +
Preference number: 5 (lower is better)
Translates to: HMQGGGDKATVLPSTFSKMANPT*ANVIEN
Trigger: GTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCAT...TTTGGAAAAGGTGGAAGGAAGAACTGTTGCTTTATCTCCCCCTCCCTGCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTATGGCAAACCCAACTTaGGCTAATGTCATTGAGAAC +
Preference number: 5 (lower is better)
Translates to: HLEDELALGLWKIIFLYPMANPT*ANVIEN
Trigger: GTTCTCAATGACATTAGCCAAAGTTGGGTTTGCCAT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGCATGCAAGCCTGATTTaGTGCCACACCTTCAAAATT +
Preference number: 5 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKHASLI*CHTFKI
Trigger: AATTTTGAAGGTGTGGCACAAAATCAGGCTTGCATG...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544260.3
CDS TCA 90 bp TTTGATCTTCTGAAACAACGCAGAAACGGACCCGGTCTCGCATGCTaGGTTAGAAGAACTGGCTTTGTCAACATCTTCCTGATTCGATTT +
Preference number: 5 (lower is better)
Translates to: FDLLKQRRNGPGLAC*VRRTGFVNIFLIRF
Trigger: AAATCGAATCAGGAAGATGTTGACAAAGCCAGTTCTTCTAACTCAGCATGCGAGACCGGGTCCGTTTCTGCGTTGTTTCAGAAGATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 90 bp CCAAGTGTTTCTGGCTTCCGTTTTCACTTTCAGATGTTGCCAAAATaGTGCTCTTCCTCTGAATACAATCTCCCTCCTGCAGGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: PSVSGFRFHFQMLPK*CSSSEYNLPPAGLE
Trigger: TTCTAGACCTGCAGGAGGGAGATTGTATTCAGAGGAAGAGCATCATTTTGGCAACATCTGAAAGTGAAAACGGAAGCCAGAAACACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTGGTTTTTCAGCACAGTaGAAAGGTTTTCAGTCTAAG +
Preference number: 5 (lower is better)
Translates to: HLEDELALGLWKIIFLYPGFSAQ*KGFQSK
Trigger: CTTAGACTGAAAACCTTTCAACTGTGCTGAAAAACC...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000381869.5
CDS-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCAGTTTTTCTAACTTaGCAGCCTATTGGGGTATTC +
Preference number: 5 (lower is better)
Translates to: HLEDELALGLWKIIFLYPSVFLT*QPIGVF
Trigger: GAATACCCCAATAGGCTGCAAAGTTAGAAAAACTGA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTAGACTGTTTGTTGTCTaGAATTCACTGATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILRLFVV*NSLMRV
Trigger: CACCCTCATCAGTGAATTCAAGACAACAAACAGTCT...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGCGGCAGATGTTGTTCTaGGAACCCTGTGTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKRQMLF*EPCVKH
Trigger: ATGCTTCACACAGGGTTCCAAGAACAACATCTGCCG...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACTCATGGGAAAGAAGCTCTTGCAATTGCATTTaGTACTTCTCTGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: CNLEESWTSHIFHSWERSSCNCI*YFSASS
Trigger: TGAAGAAGCAGAGAAGTACAAAATGCAATTGCAAGA...GCTTCTTTCCCATGAGTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTAAACTGCTCTTGCAATaGCATTTTGTACTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: HLEDELALGLWKIIFLYPKLLLQ*HFVLLC
Trigger: GCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTTT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AGGAATCTTTTGGACGGAGGCAAAAGTCTTCCTCCAGAGTTCCAGTCTCAGAAGTCACTCTTCAGATCATaGATTTGCTTCTCTAGCGAT +
Preference number: 5 (lower is better)
Translates to: RNLLDGGKSLPPEFQSQKSLFRS*ICFSSD
Trigger: ATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTGA...CTTCTGAGACTGGAACTCTGGAGGAAGACTTTTGCCTCCGTCCAAAAGATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGCAGTTTCTCATTCTaGATCTCTAACACAGCTTTC +
Preference number: 5 (lower is better)
Translates to: HLEDELALGLWKIIFLYPCSFSF*ISNTAF
Trigger: GAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGCA...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGTCCCAGAGAAAATGGAAACGCTTCAATTaGTCAACCAATGCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: AGSGALENHIPLSLSQRKWKRFN*STNAVL
Trigger: CAACACAGCATTGGTTGACAAATTGAAGCGTTTCCA...TTTTCTCTGGGACAAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTCTTCTCCAGCGACTCTaGCAGAACAGCCTGCTCCGT +
Preference number: 5 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFLLQRL*QNSLLR
Trigger: ACGGAGCAGGCTGTTCTGCAAGAGTCGCTGGAGAAG...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGTTTTGGAGGTTTCTCCTCATATTTGATGACAGCGGCATTACCAGAATTGTTGTCCATAGAGAGTCGCTaGTTGACTTTCGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: GFGGFSSYLMTAALPELLSIESR*LTFDSF
Trigger: GAAGGAGTCGAAAGTCAACAAGCGACTCTCTATGGA...CAACAATTCTGGTAATGCCGCTGTCATCAAATATGAGGAGAAACCTCCAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp TTCTTCAATGTAAGTGTCCCGAAGCTTTTCATACTCCCTGGTGTAAAACTCTTTGTGCTGATATACCTCTaGTGCCCACGTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: FFNVSVPKLFILPGVKLFVLIYL*CPRSSL
Trigger: CAAGGAGGAACGTGGGCACAAGAGGTATATCAGCAC...AAAGAGTTTTACACCAGGGAGTATGAAAAGCTTCGGGACACTTACATTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp GGTTTTGGAGGTTTCTCCTCATATTTGATGACAGCGGCATTACCAGAATTGTTGCGTTCTTTAAGTGCTTaGTGCAACAACGTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: GFGGFSSYLMTAALPELLRSLSA*CNNVRV
Trigger: GACACGGACGTTGTTGCACAAAGCACTTAAAGAACG...CAACAATTCTGGTAATGCCGCTGTCATCAAATATGAGGAGAAACCTCCAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp CACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTAGGTGGAAAAACCCATaGGTACTTCCCTTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: HLEDELALGLWKIIFLYPRWKNP*VLPFFF
Trigger: AAAGAAAAAGGGAAGTACCAATGGGTTTTTCCACCT...AGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS TCA 90 bp TTCCTGATTCGATTTCACGGCAGATGTTGTTCTTGGAACCCTGTGTaGAGCATTTTTAGAATGAGTTGTAACATGCACAGCCTGGCTAGT +
Preference number: 5 (lower is better)
Translates to: FLIRFHGRCCSWNPV*SIFRMSCNMHSLAS
Trigger: ACTAGCCAGGCTGTGCATGTTACAACTCATTCTAAAAATGCTTCACACAGGGTTCCAAGAACAACATCTGCCGTGAAATCGAATCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS GCA 90 bp TTTCTATTCAATAAGTGGCATCGACATTTCACAGCAACACTGCTGTaGAGGAGCACTTGGGGTGGATCCTTTACTGTGGATTACAAGATA +
Preference number: 5 (lower is better)
Translates to: FLFNKWHRHFTATLL*RSTWGGSFTVDYKI
Trigger: TATCTTGTAATCCACAGTAAAGGATCCACCCCAAGTGCTCCTGCACAGCAGTGTTGCTGTGAAATGTCGATGCCACTTATTGAATAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS GCA 90 bp CTATTTTTCTATTCAATAAGTGGCATCGACATTTCACAGCAACACTaGTGTGCAGGAGCACTTGGGGTGGATCCTTTACTGTGGATTACA +
Preference number: 5 (lower is better)
Translates to: LFFYSISGIDISQQH*CAGALGVDPLLWIT
Trigger: TGTAATCCACAGTAAAGGATCCACCCCAAGTGCTCCTGCACAGCAGTGTTGCTGTGAAATGTCGATGCCACTTATTGAATAGAAAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS GCA 90 bp CTCATTTCTAGCAGGAAGGAAGAAAAACAATGTTCACTACAAGTCTaGCTGGAGCCAGTCACTTTTACACATTATCACCTCTGCCTGACT +
Preference number: 5 (lower is better)
Translates to: LISSRKEEKQCSLQV*LEPVTFTHYHLCLT
Trigger: AGTCAGGCAGAGGTGATAATGTGTAAAAGTGACTGGCTCCAGGCAGACTTGTAGTGAACATTGTTTTTCTTCCTTCCTGCTAGAAATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS-3UTR CAA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTGAATGTGGTTCGCTATaGGATTCATCATGGGATAAA +
Preference number: 5 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILECGSL*DSSWDK
Trigger: TTTATCCCATGATGAATCCAATAGCGAACCACATTC...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACTTTTGGAGCAGCTATTaGCCTCAAACCGCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYFWSSY*PQTAGV
Trigger: GACTCCTGCGGTTTGAGGCAAATAGCTGCTCCAAAA...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTGCTTCGAGGATTCTTTaGCCTGCTCTTTTCAACTGC +
Preference number: 5 (lower is better)
Translates to: DCFLLSSTASSVSTESYLASRIL*PALFNC
Trigger: GCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAGC...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTATAGAGAGTCGCTTGTaGACTTTCGACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: DCFLLSSTASSVSTESYLIESRL*TFDSFS
Trigger: GGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTAT...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTCTACACAGGTCCCCATaGTGCAGTTTCCACAGAAGC +
Preference number: 5 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVLHRSP*CSFHRS
Trigger: GCTTCTGTGGAAACTGCACAATGGGGACCTGTGTAG...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGAGGTGGAAAAACCCATaGGTACTTCCCTTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: KEADHSATFPKTKGLLKGRWKNP*VLPFFF
Trigger: AAAGAAAAAGGGAAGTACCAATGGGTTTTTCCACCT...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGAAAGAAACTGAAATGCAACCTGGAGGAGAGTTGGACAAGCCACATTTTCCACAGGTGGAAAAACCCATaGGTACTTCCCTTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: GKKLKCNLEESWTSHIFHRWKNP*VLPFFF
Trigger: AAAGAAAAAGGGAAGTACCAATGGGTTTTTCCACCT...GTGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTGCATTTCAGTTTCTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AATGCTGTGTTGTTGTCCACCAGTTTCTCCATTTTCATTAACTTGATGTCCTGTGTAGAAGGTTTGCTTTaGTGGCTCTGGATGGTGGAG +
Preference number: 5 (lower is better)
Translates to: NAVLLSTSFSIFINLMSCVEGLL*WLWMVE
Trigger: CTCCACCATCCAGAGCCACAAAAGCAAACCTTCTAC...ACAGGACATCAAGTTAATGAAAATGGAGAAACTGGTGGACAACAACACAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp ACCTGGAAGATGAGCTGGCTCTGGGGCTCTGGAAAATCATATTCCTTTATCCTTCATATTCCTTTATCCTaGTCCCAGAGAAAAGTAGGT +
Preference number: 5 (lower is better)
Translates to: TWKMSWLWGSGKSYSFILHIPLS*SQRKVG
Trigger: ACCTACTTTTCTCTGGGACAAGGATAAAGGAATATG...AAGGATAAAGGAATATGATTTTCCAGAGCCCCAGAGCCAGCTCATCTTCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACCAACCTGGAGGAGAGTaGGACAAGCCACATTTTCCA +
Preference number: 5 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYQPGGE*DKPHFP
Trigger: TGGAAAATGTGGCTTGTCCAACTCTCCTCCAGGTTG...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AAAGAAGCGGACCATTCTGCTACTTTCCCAAAGACAAAGGGACTCCTTAAAGGGTCATATCCCTCATGCTaGCTCTTAGTGAATTCGAAT +
Preference number: 5 (lower is better)
Translates to: KEADHSATFPKTKGLLKGSYPSC*LLVNSN
Trigger: ATTCGAATTCACTAAGAGCAAGCATGAGGGATATGA...CCCTTTAAGGAGTCCCTTTGTCTTTGGGAAAGTAGCAGAATGGTCCGCTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381861.7
CDS TCA 90 bp GCTTCCAGCAGTATGGAAGGACTGACTCTTTCCGATGGCATGATGTaGTATAAAGGTGCAGTTAACTTTATCCACTGTCATGTCAAATGT +
Preference number: 5 (lower is better)
Translates to: ASSSMEGLTLSDGMM*YKGAVNFIHCHVKC
Trigger: ACATTTGACATGACAGTGGATAAAGTTAACTGCACCTTTATATCACATCATGCCATCGGAAAGAGTCAGTCCTTCCATACTGCTGGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000523718.5
CDS-3UTR CAA 90 bp GGAAACGCTTCAATTTGTCAACCAATGCTGTGTTGTTGTCCACCAGTTTCTCCAGAATGTGGTTCGCTATaGGATTCATCATGGGATAAA +
Preference number: 5 (lower is better)
Translates to: GNASICQPMLCCCPPVSPECGSL*DSSWDK
Trigger: TTTATCCCATGATGAATCCAATAGCGAACCACATTC...TGGAGAAACTGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACATTTTGGCCCATTTCCTaGTGCCTGTATGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTFWPIS*CLYELC
Trigger: ACAGAGCTCATACAGGCACAAGGAAATGGGCCAAAA...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTTTTTGGAGCAGCTATTaGCCTCAAACCGCAGGAGTC +
Preference number: 5 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVFWSSY*PQTAGV
Trigger: GACTCCTGCGGTTTGAGGCAAATAGCTGCTCCAAAA...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACAGCTTCGAGGATTCTTTaGCCTGCTCTTTTCAACTGC +
Preference number: 5 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTASRIL*PALFNC
Trigger: GCAGTTGAAAAGAGCAGGCAAAAGAATCCTCGAAGC...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGACCAATGCTGTGTTGTaGTCCACCAGTTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKTNAVL*STSFSI
Trigger: AATGGAGAAACTGGTGGACAACAACACAGCATTGGT...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACGAGATTGCCATGTGCTaGTCCATCCGAGCTTTCAAT +
Preference number: 5 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYEIAMC*SIRAFN
Trigger: ATTGAAAGCTCGGATGGACAAGCACATGGCAATCTC...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS TCA 90 bp CATCACCACATCAGAAAATGCTGTGTAAGTCATGTCTTGGGCTTCTaGTGGTGTGACTTGAGGGTTTTCAAAGCTTTCTCTATCATAAGT +
Preference number: 5 (lower is better)
Translates to: HHHIRKCCVSHVLGF*WCDLRVFKAFSIIS
Trigger: ACTTATGATAGAGAAAGCTTTGAAAACCCTCAAGTCACACCATCAGAAGCCCAAGACATGACTTACACAGCATTTTCTGATGTGGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000523718.5
CDS GCA 90 bp CTGACCACAGTAACTTTGCAGATAAATTGTATAACTGTTACGGCTTaGAAGAGTCCATTGATTCCAGTGTGTTTGAAGACTCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: LTTVTLQINCITVTA*KSPLIPVCLKTPGR
Trigger: TCTTCCAGGAGTCTTCAAACACACTGGAATCAATGGACTCTTGCAAGCCGTAACAGTTATACAATTTATCTGCAAAGTTACTGTGGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522757.5
CDS CCA 90 bp TGCCTGTATGAGCTCTGTGAATGTGGTTCGCTATTGGATTCATCATaGGATAAACAAAAGAACTCTTGTAATGCAGAATCATTGGGGACT +
Preference number: 5 (lower is better)
Translates to: CLYELCECGSLLDSS*DKQKNSCNAESLGT
Trigger: AGTCCCCAATGATTCTGCATTACAAGAGTTCTTTTGTTTATCCCATGATGAATCCAATAGCGAACCACATTCACAGAGCTCATACAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS-3UTR CAA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGGACATGCACATCGTTTaGTCTGTGCTAATGACCATA +
Preference number: 5 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKDMHIV*SVLMTI
Trigger: TATGGTCATTAGCACAGACAAAACGATGTGCATGTC...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTTTCTCGAAGGACCTTTaGGAGGAGTTTTCATCAAGT +
Preference number: 5 (lower is better)
Translates to: DCFLLSSTASSVSTESYLFSKDL*EEFSSS
Trigger: ACTTGATGAAAACTCCTCCAAAAGGTCCTTCGAGAA...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGTTTTGGAGGTTTCTCCTCATATTTGATGACAGCGGCATTACCAGAATTGTTGAAACTGCTCTTGCAATaGCATTTTGTACTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: GFGGFSSYLMTAALPELLKLLLQ*HFVLLC
Trigger: GCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTTT...CAACAATTCTGGTAATGCCGCTGTCATCAAATATGAGGAGAAACCTCCAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp AGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACCAATGCTGTGTTGTaGTCCACCAGTTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: RVKYTSHHYKLSTTTVVYTNAVL*STSFSI
Trigger: AATGGAGAAACTGGTGGACAACAACACAGCATTGGT...GTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTTCAACCAATGCTGTGTaGTTGTCCACCAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVSTNAV*LSTSFS
Trigger: GGAGAAACTGGTGGACAACAACACAGCATTGGTTGA...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGTGGAAACGCTTCAATTaGTCAACCAATGCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKWKRFN*STNAVL
Trigger: CAACACAGCATTGGTTGACAAATTGAAGCGTTTCCA...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp AACCCTTGGAAGTACAACGGATTTACTGTTTATCAAGAGGGGAAACTTTCACTACTCACAAACCAACCCTaGGAAGTACAACGGATTTAC +
Preference number: 5 (lower is better)
Translates to: NPWKYNGFTVYQEGKLSLLTNQP*EVQRIY
Trigger: GTAAATCCGTTGTACTTCCAAGGGTTGGTTTGTGAG...TAGTGAAAGTTTCCCCTCTTGATAAACAGTAAATCCGTTGTACTTCCAAGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519066.5
CDS TCA 90 bp TTTCTCCAACTAGTCTTTGTTGTGATCCATCTGTGTACTCACTGGTaGCCTTTCCTGAAGAACATGCACACTGATTTCCAATATCTGAAA +
Preference number: 5 (lower is better)
Translates to: FLQLVFVVIHLCTHW*PFLKNMHTDFQYLK
Trigger: TTTCAGATATTGGAAATCAGTGTGCATGTTCTTCAGGAAAGGTCACCAGTGAGTACACAGATGGATCACAACAAAGACTAGTTGGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000523718.5
CDS TCA 90 bp ACGGCAGATGTTGTTCTTGGAACCCTGTGTGAAGCATTTTTAGAATaGGTTGTAACATGCACAGCCTGGCTAGTAATGAGTTTATTAAAC +
Preference number: 5 (lower is better)
Translates to: TADVVLGTLCEAFLE*VVTCTAWLVMSLLN
Trigger: GTTTAATAAACTCATTACTAGCCAGGCTGTGCATGTTACAACTCATTCTAAAAATGCTTCACACAGGGTTCCAAGAACAACATCTGCCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 90 bp AACAGATTAAACCAGCTAGCAAATCAAACTAAGAAAGAGACTCACTaGTTTGAATGCTTAATCCGCAACAGGAACACATCGCCACTAGAC +
Preference number: 5 (lower is better)
Translates to: NRLNQLANQTKKETH*FECLIRNRNTSPLD
Trigger: GTCTAGTGGCGATGTGTTCCTGTTGCGGATTAAGCATTCAAATCAGTGAGTCTCTTTCTTAGTTTGATTTGCTAGCTGGTTTAATCTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381861.7
CDS GCA 90 bp GACTTGAGGGTTTTCAAAGCTTTCTCTATCATAAGTAGTTTCTCTTaGATGCGTCTTATCAGAATGGGAAGATGTCCAAGTGGAATAGGA +
Preference number: 5 (lower is better)
Translates to: DLRVFKAFSIISSFS*MRLIRMGRCPSGIG
Trigger: TCCTATTCCACTTGGACATCTTCCCATTCTGATAAGACGCATGCAAGAGAAACTACTTATGATAGAGAAAGCTTTGAAAACCCTCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000523718.5
CDS GCA 90 bp CAATTCTTCATTCTCCTGCTGGAAACGCTTCAATTTGTCAACCAATaGTGTGTTGTTGTCCACCTTGGCATAAACAAGAATTCCAACATT +
Preference number: 5 (lower is better)
Translates to: QFFILLLETLQFVNQ*CVVVHLGINKNSNI
Trigger: AATGTTGGAATTCTTGTTTATGCCAAGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518889.1
CDS GCA 90 bp AGTTTCTCTGAGTGGCTAGCTTCAATTTCCAACTTAGAGGTTTCATaGGCAGCATTTAAGTTGTCAAACTGTAAGCAACAAACAAAACCG +
Preference number: 5 (lower is better)
Translates to: SFSEWLASISNLEVS*AAFKLSNCKQQTKP
Trigger: CGGTTTTGTTTGTTGCTTACAGTTTGACAACTTAAATGCTGCGCATGAAACCTCTAAGTTGGAAATTGAAGCTAGCCACTCAGAGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523471.5
CDS-3UTR CAA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTGGTTTCTCCTCATATTaGATGACAGCGGCATTACCA +
Preference number: 5 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVGFSSY*MTAALP
Trigger: TGGTAATGCCGCTGTCATCAAATATGAGGAGAAACC...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGTCTGAAATGCTGGTTTaGGAGGTTTCTCCTCATATT +
Preference number: 5 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKSEMLV*EVSPHI
Trigger: AATATGAGGAGAAACCTCCAAAACCAGCATTTCAGA...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CAAGAAGTTACCCCCAAAAGATACAGAGAATGTATAGACAGGGACAAGTCAAAGAAACTGCTCTTGCAATaGCATTTTGTACTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: QEVTPKRYRECIDRDKSKKLLLQ*HFVLLC
Trigger: GCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTTT...CTTTGACTTGTCCCTGTCTATACATTCTCTGTATCTTTTGGGGGTAACTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTTGCAGTTTCTCATTCTaGATCTCTAACACAGCTTTC +
Preference number: 5 (lower is better)
Translates to: DCFLLSSTASSVSTESYLCSFSF*ISNTAF
Trigger: GAAAGCTGTGTTAGAGATCAAGAATGAGAAACTGCA...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTATAGAGAGTCGCTTGTaGACTTTCGACTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFIESRL*TFDSFS
Trigger: GGAGAAGGAGTCGAAAGTCAACAAGCGACTCTCTAT...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTAGGTGGAAAAACCCATaGGTACTTCCCTTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: DCFLLSSTASSVSTESYLRWKNP*VLPFFF
Trigger: AAAGAAAAAGGGAAGTACCAATGGGTTTTTCCACCT...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS TCA 90 bp TGTTGCAGATATTTGGGCTTCTCAGTACCTACAAGTGCAGGACACTaGCAAATAGAATCTTTATGCATATCTAACACCTGCTTACTAATG +
Preference number: 5 (lower is better)
Translates to: CCRYLGFSVPTSAGH*QIESLCISNTCLLM
Trigger: CATTAGTAAGCAGGTGTTAGATATGCATAAAGATTCTATTTGTCAGTGTCCTGCACTTGTAGGTACTGAGAAGCCCAAATATCTGCAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000518755.1
ENST00000519263.5
ENST00000523718.5
CDS GCA 90 bp AAGCCCATCCTATTTAACACAAGGCTGGCATTTGTAACTATTATTTaGATCCTTAGTGGGAAAAGGCATCTGTTAACAATAAACCACGCA +
Preference number: 5 (lower is better)
Translates to: KPILFNTRLAFVTII*ILSGKRHLLTINHA
Trigger: TGCGTGGTTTATTGTTAACAGATGCCTTTTCCCACTAAGGATGCAAATAATAGTTACAAATGCCAGCCTTGTGTTAAATAGGATGGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS-3UTR CAA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTGTTCTAGGACTGGTGTaGACATGCACATCGTTTTGT +
Preference number: 5 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFVLGLV*TCTSFC
Trigger: ACAAAACGATGTGCATGTCAACACCAGTCCTAGAAC...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000520196.5
CDS-3UTR CAA 90 bp TTCTTCAATGTAAGTGTCCCGAAGCTTTTCATACTCCCTGGTGTAAAACTCTTTTCAGTTTTTCTAACTTaGCAGCCTATTGGGGTATTC +
Preference number: 5 (lower is better)
Translates to: FFNVSVPKLFILPGVKLFSVFLT*QPIGVF
Trigger: GAATACCCCAATAGGCTGCAAAGTTAGAAAAACTGA...AAAGAGTTTTACACCAGGGAGTATGAAAAGCTTCGGGACACTTACATTGAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTTCTTGCAATTGCATTTaGTACTTCTCTGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: DCFLLSSTASSVSTESYLSCNCI*YFSASS
Trigger: TGAAGAAGCAGAGAAGTACAAAATGCAATTGCAAGA...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GACTGTTTTCTTCTATCAAGTACTGCATCATCGGTAAGCACTGAATCCTACCTTTTTTCTTCTATGGCTTaGGCTGAAATGTATATGCTG +
Preference number: 5 (lower is better)
Translates to: DCFLLSSTASSVSTESYLFSSMA*AEMYML
Trigger: CAGCATATACATTTCAGCCAAAGCCATAGAAGAAAA...AAGGTAGGATTCAGTGCTTACCGATGATGCAGTACTTGATAGAAGAAAACAGTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACACATATTCCTTTATCCTaGTCCCAGAGAAAAGTAGGT +
Preference number: 5 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTHIPLS*SQRKVG
Trigger: ACCTACTTTTCTCTGGGACAAGGATAAAGGAATATG...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTAAACTGCTCTTGCAATaGCATTTTGTACTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVKLLLQ*HFVLLC
Trigger: GCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTTT...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATTGCGCAGCATTTAAGTaGTCAAACTGCTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: LKTHKKVSVVKNITKVINCAAFK*SNCSCN
Trigger: ATTGCAAGAGCAGTTTGACAACTTAAATGCTGCGCA...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTCCCATCACTACAAACTGAGCACAACTACAGTTGTCTACACATTCATATTTTTTGCGCAGCATTTAAGTaGTCAAACTGCTCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: FPSLQTEHNYSCLHIHIFCAAFK*SNCSCN
Trigger: ATTGCAAGAGCAGTTTGACAACTTAAATGCTGCGCA...AAAAATATGAATGTGTAGACAACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp TTGATCAGAGTAAAATACACTTCCCATCACTACAAACTGAGCACAACTACAGTTTCACTCTTCAGATCATaGATTTGCTTCTCTAGCGAT +
Preference number: 5 (lower is better)
Translates to: LIRVKYTSHHYKLSTTTVSLFRS*ICFSSD
Trigger: ATCGCTAGAGAAGCAAATCAATGATCTGAAGAGTGA...AACTGTAGTTGTGCTCAGTTTGTAGTGATGGGAAGTGTATTTTACTCTGATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp GGCAGTGAACCTACATTTCCATTTATCAGAAGCAAACATGGAAGGTTACATACATTTTCTTCTATGGCTTaGGCTGAAATGTATATGCTG +
Preference number: 5 (lower is better)
Translates to: GSEPTFPFIRSKHGRLHTFSSMA*AEMYML
Trigger: CAGCATATACATTTCAGCCAAAGCCATAGAAGAAAA...TGTATGTAACCTTCCATGTTTGCTTCTGATAAATGGAAATGTAGGTTCACTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATCAGGCTTTAGTTTATTaGGAAAGTGGTTTCAGCACC +
Preference number: 5 (lower is better)
Translates to: LKTHKKVSVVKNITKVINQALVY*ESGFST
Trigger: GGTGCTGAAACCACTTTCCAAATAAACTAAAGCCTG...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATAAACTGCTCTTGCAATaGCATTTTGTACTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LKTHKKVSVVKNITKVINKLLLQ*HFVLLC
Trigger: GCAGAGAAGTACAAAATGCAATTGCAAGAGCAGTTT...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS-3UTR CAA 90 bp CTGAAAACTCACAAGAAGGTGTCTGTGGTGAAGAACATTACAAAGGTTATAAATTTTTCTTCTATGGCTTaGGCTGAAATGTATATGCTG +
Preference number: 5 (lower is better)
Translates to: LKTHKKVSVVKNITKVINFSSMA*AEMYML
Trigger: CAGCATATACATTTCAGCCAAAGCCATAGAAGAAAA...ATTTATAACCTTTGTAATGTTCTTCACCACAGACACCTTCTTGTGAGTTTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000297488.10
ENST00000381861.7
ENST00000381869.5
ENST00000520196.5
ENST00000544260.3
CDS GCA 72 bp AGCGACGAGATCCGCATCCGTCCCTTCCGCAGGCTCTaGGCTGGCCCACGTGAGACCCGCCTCCGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: SDEIRIRPFRRL*AGPRETRLRSA
Trigger: GGCGGAGCGGAGGCGGGTCTCACGTGGGCCAGCGCAGAGCCTGCGGAAGGGACGGATGCGGATCTCGTCGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000523718.5
CDS TCA 72 bp TATTCCACCCGCTTTCTCGGCCCCGCTTGCTTCTGCTaGGAAGGGGCCCTGCGAGAAGGCTGGGACCGCCGG +
Preference number: 6 (lower is better)
Translates to: YSTRFLGPACFC*EGALREGWDRR
Trigger: CCGGCGGTCCCAGCCTTCTCGCAGGGCCCCTTCTCAGCAGAAGCAAGCGGGGCCGAGAAAGCGGGTGGAATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000523718.5
CDS CAA 90 bp TTGGGACCTGCAGCAACCCTATTCCACCCGCTTTCTCGGCCCCGCTaGCTTCTGCTGAGAAGGGGCCCTGCGAGAAGGCTGGGACCGCCG +
Preference number: 6 (lower is better)
Translates to: LGPAATLFHPLSRPR*LLLRRGPARRLGPP
Trigger: CGGCGGTCCCAGCCTTCTCGCAGGGCCCCTTCTCAGCAGAAGCAAGCGGGGCCGAGAAAGCGGGTGGAATAGGGTTGCTGCAGGTCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000523718.5
CDS GCA 72 bp GAAAGTAGCGAGGCGCCACGAGGGGTCTTTGGGACCTaGAGCAACCCTATTCCACCCGCTTTCTCGGCCCCG +
Preference number: 6 (lower is better)
Translates to: ESSEAPRGVFGT*SNPIPPAFSAP
Trigger: CGGGGCCGAGAAAGCGGGTGGAATAGGGTTGCTGCAGGTCCCAAAGACCCCTCGTGGCGCCTCGCTACTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000523718.5
CDS CAA 72 bp GCAGCAACCCTATTCCACCCGCTTTCTCGGCCCCGCTaGCTTCTGCTGAGAAGGGGCCCTGCGAGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: AATLFHPLSRPR*LLLRRGPARRL
Trigger: CAGCCTTCTCGCAGGGCCCCTTCTCAGCAGAAGCAAGCGGGGCCGAGAAAGCGGGTGGAATAGGGTTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000523718.5
CDS CAA 90 bp AGTGCAAACAAGCTGCAGAAAGTAGCGAGGCGCCACGAGGGGTCTTaGGGACCTGCAGCAACCCTATTCCACCCGCTTTCTCGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: SANKLQKVARRHEGS*GPAATLFHPLSRPR
Trigger: GCGGGGCCGAGAAAGCGGGTGGAATAGGGTTGCTGCAGGTCCCAAAGACCCCTCGTGGCGCCTCGCTACTTTCTGCAGCTTGTTTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000523718.5
CDS TCA 72 bp GGAGTCCACAGTCAAGCCCCTCGGTCACTTTCAAGGTaGCAGCGACGAGATCCGCATCCGTCCCTTCCGCAG +
Preference number: 6 (lower is better)
Translates to: GVHSQAPRSLSR*QRRDPHPSLPQ
Trigger: CTGCGGAAGGGACGGATGCGGATCTCGTCGCTGTCACCTTGAAAGTGACCGAGGGGCTTGACTGTGGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000523718.5
CDS CAA 90 bp CAGTCGGGTCTGTCTACATTCAAAGCTCTAGCAGGAGGCGCGCCATaGGCCCTCGGGCGTCTTACTTCATGTCCTGCAGGTTACCGTGTG +
Preference number: 6 (lower is better)
Translates to: QSGLSTFKALAGGAP*ALGRLTSCPAGYRV
Trigger: CACACGGTAACCTGCAGGACATGAAGTAAGACGCCCGAGGGCCAATGGCGCGCCTCCTGCTAGAGCTTTGAATGTAGACAGACCCGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519066.5
ENST00000634613.1
CDS TCA 72 bp ACGAGGATCACCCAAGACGGAGCTCCCACCACATCCTaGTCACAGCGTTGCAGAGATCATGAGACCCGGCCT +
Preference number: 6 (lower is better)
Translates to: TRITQDGAPTTS*SQRCRDHETRP
Trigger: AGGCCGGGTCTCATGATCTCTGCAACGCTGTGATCAGGATGTGGTGGGAGCTCCGTCTTGGGTGATCCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521772.5
CDS CAA 72 bp AAGCTGCAGAAAGTAGCGAGGCGCCACGAGGGGTCTTaGGGACCTGCAGCAACCCTATTCCACCCGCTTTCT +
Preference number: 6 (lower is better)
Translates to: KLQKVARRHEGS*GPAATLFHPLS
Trigger: AGAAAGCGGGTGGAATAGGGTTGCTGCAGGTCCCAAAGACCCCTCGTGGCGCCTCGCTACTTTCTGCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000523718.5
CDS CAA 72 bp GCCTCAAACAGGAAACAGGGGGCCCCACTTTGGCTTTaGGAGCAGCTATTTGCCTCAAACCGCAGGAGTCAG +
Preference number: 6 (lower is better)
Translates to: ASNRKQGAPLWL*EQLFASNRRSQ
Trigger: CTGACTCCTGCGGTTTGAGGCAAATAGCTGCTCCAAAAGCCAAAGTGGGGCCCCCTGTTTCCTGTTTGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 90 bp CACTGTTCCGCCTCAAACAGGAAACAGGGGGCCCCACTTTGGCTTTaGGAGCAGCTATTTGCCTCAAACCGCAGGAGTCAGGCTTGGATA +
Preference number: 6 (lower is better)
Translates to: HCSASNRKQGAPLWL*EQLFASNRRSQAWI
Trigger: TATCCAAGCCTGACTCCTGCGGTTTGAGGCAAATAGCTGCTCCAAAAGCCAAAGTGGGGCCCCCTGTTTCCTGTTTGAGGCGGAACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 72 bp AGGGTGATGAGGCACTGGTCTGCTGAGGTCTGGGCGTaGCCTTTGATAAAGCAGCATCTTTGGGCTGCAACA +
Preference number: 6 (lower is better)
Translates to: RVMRHWSAEVWA*PLIKQHLWAAT
Trigger: TGTTGCAGCCCAAAGATGCTGCTTTATCAAAGGTCACGCCCAGACCTCAGCAGACCAGTGCCTCATCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 72 bp TCCCACCACATCCTGATCACAGCGTTGCAGAGATCATaGGACCCGGCCTTTGCAGGCAAGAGTTGCTTGTCA +
Preference number: 6 (lower is better)
Translates to: SHHILITALQRS*DPAFAGKSCLS
Trigger: TGACAAGCAACTCTTGCCTGCAAAGGCCGGGTCTCATGATCTCTGCAACGCTGTGATCAGGATGTGGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521772.5
CDS GCA 72 bp GCCTTGTTGCTGCACATGGAGAATAGAGGCACAGTTTaGTGCTGGGGCAGCCCATTTTCCAGCTTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: ALLLHMENRGTV*CWGSPFSSFCL
Trigger: GAGACAGAAGCTGGAAAATGGGCTGCCCCAGCAGCAAACTGTGCCTCTATTCTCCATGTGCAGCAACAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517413.5
ENST00000519066.5
ENST00000634613.1
CDS CAA 90 bp TACAATTGTTGCTGTAAGTGCTCAGCTCACTGTGGGTGCTGGCTATaGAGGGGGTGCTTCCTGTCCTCCGCAGCGCAGGACTTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: YNCCCKCSAHCGCWL*RGCFLSSAAQDFSK
Trigger: CTTTGAAAAGTCCTGCGCTGCGGAGGACAGGAAGCACCCCCTCAATAGCCAGCACCCACAGTGAGCTGAGCACTTACAGCAACAATTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523718.5
CDS TCA 72 bp GTAGGCTTTCCAGAACTGGACACACGCCTGATCCTCTaGGGAGATACGGCTCGATCAGCACTGGGATTTCTA +
Preference number: 6 (lower is better)
Translates to: VGFPELDTRLIL*GDTARSALGFL
Trigger: TAGAAATCCCAGTGCTGATCGAGCCGTATCTCCTCAGAGGATCAGGCGTGTGTCCAGTTCTGGAAAGCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262102.10
ENST00000523718.5
CDS TCA 72 bp GCATTACCAGCAGAACTGGACACACGCCTGATCCTCTaGGGAGATACGGCTCGATCAGCACTGGGATTTCTA +
Preference number: 6 (lower is better)
Translates to: ALPAELDTRLIL*GDTARSALGFL
Trigger: TAGAAATCCCAGTGCTGATCGAGCCGTATCTCCTCAGAGGATCAGGCGTGTGTCCAGTTCTGCTGGTAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381869.5
ENST00000519263.5
CDS TCA 72 bp AAGCAGCTTTTGGCAAAACAGAACTGGACACACGCCTaGTCCTCTGAGGAGATACGGCTCGATCAGCACTGG +
Preference number: 6 (lower is better)
Translates to: KQLLAKQNWTHA*SSEEIRLDQHW
Trigger: CCAGTGCTGATCGAGCCGTATCTCCTCAGAGGATCAGGCGTGTGTCCAGTTCTGTTTTGCCAAAAGCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS GCA 72 bp AGCCTGGGCAATGTCGCGAGACTCTGTCCCCACATGTaGACACACAAAGAATGCATGAAGAGCAACGCAACT +
Preference number: 6 (lower is better)
Translates to: SLGNVARLCPHM*THKECMKSNAT
Trigger: AGTTGCGTTGCTCTTCATGCATTCTTTGTGTGTGCACATGTGGGGACAGAGTCTCGCGACATTGCCCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523471.5
CDS CAA 72 bp GTTACGGCTTGCAAGAGTCCATTGATTCCAGTGTGTTaGAAGACTCCTGGAAGACAGGCTAGCTCTCCCCGG +
Preference number: 6 (lower is better)
Translates to: VTACKSPLIPVC*KTPGRQASSPR
Trigger: CCGGGGAGAGCTAGCCTGTCTTCCAGGAGTCTTCAAACACACTGGAATCAATGGACTCTTGCAAGCCGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522757.5
CDS CAA 90 bp GAGCACTTGGGGTGGATCCTTTACTGTGGATTACAAGATAGAAACTaGTACTTGCCACTTCCCAGGGACCTAAGCTGGCAACCACCACCG +
Preference number: 6 (lower is better)
Translates to: EHLGWILYCGLQDRN*YLPLPRDLSWQPPP
Trigger: CGGTGGTGGTTGCCAGCTTAGGTCCCTGGGAAGTGGCAAGTACAAGTTTCTATCTTGTAATCCACAGTAAAGGATCCACCCCAAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS CAA 90 bp CTCTGCCTGACTTTGGGCAACTCTATTTTTGTGGTGAGAAAGTCCTaGCTGAAGGTCACACAGCCGGTTCTTAGCACTCATCCACGCTGC +
Preference number: 6 (lower is better)
Translates to: LCLTLGNSIFVVRKS*LKVTQPVLSTHPRC
Trigger: GCAGCGTGGATGAGTGCTAAGAACCGGCTGTGTGACCTTCAGCAAGGACTTTCTCACCACAAAAATAGAGTTGCCCAAAGTCAGGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS TCA 72 bp GAATTCACTGATGAGGGTGATGAGGCACTGGTCTGCTaGGGTCTGGGCGTGACCTTTGATAAAGCAGCATCT +
Preference number: 6 (lower is better)
Translates to: EFTDEGDEALVC*GLGVTFDKAAS
Trigger: AGATGCTGCTTTATCAAAGGTCACGCCCAGACCTCAGCAGACCAGTGCCTCATCACCCTCATCAGTGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 72 bp CTGCTAGGCTTAGTCAGATCAGTGCCAGGAATTCTGTaGACTGAAGGTCAAGCTAGCTCTCCCCGGAGGTTA +
Preference number: 6 (lower is better)
Translates to: LLGLVRSVPGIL*TEGQASSPRRL
Trigger: TAACCTCCGGGGAGAGCTAGCTTGACCTTCAGTTCACAGAATTCCTGGCACTGATCTGACTAAGCCTAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519066.5
ENST00000521635.5
ENST00000523183.5
CDS GCA 72 bp TACAGTCAGACGCACTCTTTTTCCGCAGCCTCAGCATaGTTACGTGACAGAAGCGGTTGGATGCTTCTGTGT +
Preference number: 6 (lower is better)
Translates to: YSQTHSFSAASA*LRDRSGWMLLC
Trigger: ACACAGAAGCATCCAACCGCTTCTGTCACGTAAGCATGCTGAGGCTGCGGAAAAAGAGTGCGTCTGACTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518792.5
CDS CCA 72 bp GTGCACACACAAAGAATGCATGAAGAGCAACGCAACTaGGATTCACCGCTCAACTCTCCTCTGTCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: VHTQRMHEEQRN*DSPLNSPLSPS
Trigger: GGAAGGAGACAGAGGAGAGTTGAGCGGTGAATCCCAGTTGCGTTGCTCTTCATGCATTCTTTGTGTGTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523471.5
CDS TCA 72 bp CTGAAACAACGCAGAAACGGACCCGGTCTCGCATGCTaGGTTAGAAGAACTGGCTTTGTCAACATCTTCCTG +
Preference number: 6 (lower is better)
Translates to: LKQRRNGPGLAC*VRRTGFVNIFL
Trigger: CAGGAAGATGTTGACAAAGCCAGTTCTTCTAACTCAGCATGCGAGACCGGGTCCGTTTCTGCGTTGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 72 bp TTTGGCAAAACAGAACTGGACACACGCCTGATCCTCTaGGGAGATACGGCTCGATCAGCACTGGGATTTCTA +
Preference number: 6 (lower is better)
Translates to: FGKTELDTRLIL*GDTARSALGFL
Trigger: TAGAAATCCCAGTGCTGATCGAGCCGTATCTCCTCAGAGGATCAGGCGTGTGTCCAGTTCTGTTTTGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520196.5
CDS CCA 72 bp CCGTCAGTCGTATGTGAATGGTGGATAAGGAGAATTTaGGAGACAACAACATGTCTTCGGAGCAGGTGGCGA +
Preference number: 6 (lower is better)
Translates to: PSVVCEWWIRRI*ETTTCLRSRWR
Trigger: TCGCCACCTGCTCCGAAGACATGTTGTTGTCTCCCAAATTCTCCTTATCCACCATTCACATACGACTGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS GCA 72 bp GATCACAGCGTTGCAGAGATCATGAGACCCGGCCTTTaGAGGCAAGAGTTGCTTGTCATTCAAAGCATTTTC +
Preference number: 6 (lower is better)
Translates to: DHSVAEIMRPGL*RQELLVIQSIF
Trigger: GAAAATGCTTTGAATGACAAGCAACTCTTGCCTGCAAAGGCCGGGTCTCATGATCTCTGCAACGCTGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521772.5
CDS GCA 72 bp CCCCCGAAGTGTGATATAAAGTCGACTTACAATTGTTaGTGTAAGTGCTCAGCTCACTGTGGGTGCTGGCTA +
Preference number: 6 (lower is better)
Translates to: PPKCDIKSTYNC*CKCSAHCGCWL
Trigger: TAGCCAGCACCCACAGTGAGCTGAGCACTTACAGCAACAATTGTAAGTCGACTTTATATCACACTTCGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523718.5
CDS CCA 72 bp ACCCTGAAGGAAGTCGAAGGTTTCGAAGCAATCCTTTaGCCGTCAGTCGTATGTGAATGGTGGATAAGGAGA +
Preference number: 6 (lower is better)
Translates to: TLKEVEGFEAIL*PSVVCEWWIRR
Trigger: TCTCCTTATCCACCATTCACATACGACTGACGGCCAAAGGATTGCTTCGAAACCTTCGACTTCCTTCAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS CCA 72 bp CTTAGCACTCATCCACGCTGCTCTGTAAGATGCAACTaGTTTAGTAGAAAGACTGTGAGCGACACTGCCGAT +
Preference number: 6 (lower is better)
Translates to: LSTHPRCSVRCN*FSRKTVSDTAD
Trigger: ATCGGCAGTGTCGCTCACAGTCTTTCTACTAAACCAGTTGCATCTTACAGAGCAGCGTGGATGAGTGCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS CAA 72 bp AGGATAAAGAAGATGTACTTCCACTTCTCCTACCAGTaGGTGGCAGGCTTCCAGCAGTATGGAAGGACTGAC +
Preference number: 6 (lower is better)
Translates to: RIKKMYFHFSYQ*VAGFQQYGRTD
Trigger: GTCAGTCCTTCCATACTGCTGGAAGCCTGCCACCAACTGGTAGGAGAAGTGGAAGTACATCTTCTTTATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000523718.5
CDS CAA 72 bp GGAGCAGCTATTTGCCTCAAACCGCAGGAGTCAGGCTaGGATATATTCCTACCTGAGGTGGTCGTTGTTTTT +
Preference number: 6 (lower is better)
Translates to: GAAICLKPQESG*DIFLPEVVVVF
Trigger: AAAAACAACGACCACCTCAGGTAGGAATATATCCAAGCCTGACTCCTGCGGTTTGAGGCAAATAGCTGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 90 bp CATTCAAGTCAGATCTCGGTGTTCTGCTCAAGACTGTTTGTTGTCTaGAATTCACTGATGAGGGTGATGAGGCACTGGTCTGCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: HSSQISVFCSRLFVV*NSLMRVMRHWSAEV
Trigger: GACCTCAGCAGACCAGTGCCTCATCACCCTCATCAGTGAATTCAAGACAACAAACAGTCTTGAGCAGAACACCGAGATCTGACTTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 90 bp TTGGCTTTTGGAGCAGCTATTTGCCTCAAACCGCAGGAGTCAGGCTaGGATATATTCCTACCTGAGGTGGTCGTTGTTTTTGAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: LAFGAAICLKPQESG*DIFLPEVVVVFEAE
Trigger: CTCTGCTTCAAAAACAACGACCACCTCAGGTAGGAATATATCCAAGCCTGACTCCTGCGGTTTGAGGCAAATAGCTGCTCCAAAAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 90 bp TGTATAACTGTTACGGCTTGCAAGAGTCCATTGATTCCAGTGTGTTaGAAGACTCCTGGAAGACAGGCTAGCTCTCCCCGGAGGTTAACA +
Preference number: 6 (lower is better)
Translates to: CITVTACKSPLIPVC*KTPGRQASSPRRLT
Trigger: TGTTAACCTCCGGGGAGAGCTAGCCTGTCTTCCAGGAGTCTTCAAACACACTGGAATCAATGGACTCTTGCAAGCCGTAACAGTTATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522757.5
CDS CAA 90 bp AAGTGGAATAGGATAAAGAAGATGTACTTCCACTTCTCCTACCAGTaGGTGGCAGGCTTCCAGCAGTATGGAAGGACTGACTCTTTCCGA +
Preference number: 6 (lower is better)
Translates to: KWNRIKKMYFHFSYQ*VAGFQQYGRTDSFR
Trigger: TCGGAAAGAGTCAGTCCTTCCATACTGCTGGAAGCCTGCCACCAACTGGTAGGAGAAGTGGAAGTACATCTTCTTTATCCTATTCCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000523718.5
CDS TCA 72 bp CTTTCCATTTTAACAGGGAGTATGCCTTTGATCTTCTaGAACAACGCAGAAACGGACCCGGTCTCGCATGCT +
Preference number: 6 (lower is better)
Translates to: LSILTGSMPLIF*NNAETDPVSHA
Trigger: AGCATGCGAGACCGGGTCCGTTTCTGCGTTGTTTCAGAAGATCAAAGGCATACTCCCTGTTAAAATGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 72 bp TACCAGTCTCATATGAGTCCAGCTACTGCTGCTAGGTaGCCCGTCGGAAATGTGCTCATTAATTCGGTCATT +
Preference number: 6 (lower is better)
Translates to: YQSHMSPATAAR*PVGNVLINSVI
Trigger: AATGACCGAATTAATGAGCACATTTCCGACGGGTCACCTAGCAGCAGTAGCTGGACTCATATGAGACTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524044.5
CDS GCA 72 bp GACACTGTCTCTCTCAGATTTTGGCCCATTTCCTTGTaGCTGTATGAGCTCTGTGAATGTGGTTCGCTATTG +
Preference number: 6 (lower is better)
Translates to: DTVSLRFWPISL*LYELCECGSLL
Trigger: CAATAGCGAACCACATTCACAGAGCTCATACAGGCACAAGGAAATGGGCCAAAATCTGAGAGAGACAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS GCA 72 bp AAGGTCACACAGCCGGTTCTTAGCACTCATCCACGCTaGTCTGTAAGATGCAACTGGTTTAGTAGAAAGACT +
Preference number: 6 (lower is better)
Translates to: KVTQPVLSTHPR*SVRCNWFSRKT
Trigger: AGTCTTTCTACTAAACCAGTTGCATCTTACAGAGCAGCGTGGATGAGTGCTAAGAACCGGCTGTGTGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS CCA 72 bp GGTCAGTTTCATAATCAACCACCATGTCATCTGGGTTaGCAGAATTCCAGTTCACACTGCTGGCTGAAGAGT +
Preference number: 6 (lower is better)
Translates to: GQFHNQPPCHLG*QNSSSHCWLKS
Trigger: ACTCTTCAGCCAGCAGTGTGAACTGGAATTCTGCCAACCCAGATGACATGGTGGTTGATTATGAAACTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000518755.1
ENST00000518891.1
ENST00000519263.5
ENST00000523718.5
CDS CCA 72 bp AGAATTTGGGAGACAACAACATGTCTTCGGAGCAGGTaGCGAGATTTCACAGAAGAGGCAATTTCCATGGAC +
Preference number: 6 (lower is better)
Translates to: RIWETTTCLRSR*RDFTEEAISMD
Trigger: GTCCATGGAAATTGCCTCTTCTGTGAAATCTCGCCACCTGCTCCGAAGACATGTTGTTGTCTCCCAAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS CCA 72 bp CGACATTTCACAGCAACACTGCTGTGCAGGAGCACTTaGGGTGGATCCTTTACTGTGGATTACAAGATAGAA +
Preference number: 6 (lower is better)
Translates to: RHFTATLLCRST*GGSFTVDYKIE
Trigger: TTCTATCTTGTAATCCACAGTAAAGGATCCACCCCAAGTGCTCCTGCACAGCAGTGTTGCTGTGAAATGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS CCA 72 bp GCAGGCTCTCATAAATGCCACTCCAGACTCCTGGTCTaGAAACCCTGTGCTCTTTTCAATTTGCTCTTCATA +
Preference number: 6 (lower is better)
Translates to: AGSHKCHSRLLV*KPCALFNLLFI
Trigger: TATGAAGAGCAAATTGAAAAGAGCACAGGGTTTCCAGACCAGGAGTCTGGAGTGGCATTTATGAGAGCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS CAA 72 bp CCGTCGCTTCAATCGGTGAAACAGAAAAGGTTACTTTaGTGGGTTCTAGGACTGGTGTTGACATGCACATCG +
Preference number: 6 (lower is better)
Translates to: PSLQSVKQKRLL*WVLGLVLTCTS
Trigger: CGATGTGCATGTCAACACCAGTCCTAGAACCCACAAAAGTAACCTTTTCTGTTTCACCGATTGAAGCGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 72 bp CAGATCTCGGTGTTCTGCTCAAGACTGTTTGTTGTCTaGAATTCACTGATGAGGGTGATGAGGCACTGGTCT +
Preference number: 6 (lower is better)
Translates to: QISVFCSRLFVV*NSLMRVMRHWS
Trigger: AGACCAGTGCCTCATCACCCTCATCAGTGAATTCAAGACAACAAACAGTCTTGAGCAGAACACCGAGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 90 bp TCACAGGTGGTTGAAGCAGTGACCCAGTGCCTGACCACAGTAACTTaGCAGATAAATTGTATAACTGTTACGGCTTGCAAGAGTCCATTG +
Preference number: 6 (lower is better)
Translates to: SQVVEAVTQCLTTVT*QINCITVTACKSPL
Trigger: CAATGGACTCTTGCAAGCCGTAACAGTTATACAATTTATCTGCAAAGTTACTGTGGTCAGGCACTGGGTCACTGCTTCAACCACCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522757.5
CDS TCA 72 bp TGTCCTGGCGGGCTACTTAGAATCAATTCTGAGGTATaGTTTTGGGTTCCCAAATCCTTTCCTTTGGAGACC +
Preference number: 6 (lower is better)
Translates to: CPGGLLRINSEV*FWVPKSFPLET
Trigger: GGTCTCCAAAGGAAAGGATTTGGGAACCCAAAATCATACCTCAGAATTGATTCTAAGTAGCCCGCCAGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 72 bp AACTGTGTGGAAAACAACAGTGCTTCTCCTAAACCCTaGAGGAAGTCGAAGGTTTCGAAGCAATCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: NCVENNSASPKP*RKSKVSKQSFG
Trigger: GCCAAAGGATTGCTTCGAAACCTTCGACTTCCTTCAGGGTTTAGGAGAAGCACTGTTGTTTTCCACACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS TCA 72 bp GAGGTCAGAAGATCGAGACCATCCTGGCTAACACGGTaGAACCCCATCTCTGCATTAAGAGCTGTAAATAAA +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPISALRAVNK
Trigger: TTTATTTACAGCTCTTAATGCAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTTCTGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518975.1
CDS GCA 72 bp CTGGGCGTGACCTTTGATAAAGCAGCATCTTTGGGCTaGAACACTGCTCTAGACATAACTTTTGCTTTGACA +
Preference number: 6 (lower is better)
Translates to: LGVTFDKAASLG*NTALDITFALT
Trigger: TGTCAAAGCAAAAGTTATGTCTAGAGCAGTGTTGCAGCCCAAAGATGCTGCTTTATCAAAGGTCACGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CCA 72 bp TTTCACAGCAACACTGCTGTGCAGGAGCACTTGGGGTaGATCCTTTACTGTGGATTACAAGATAGAAACTTG +
Preference number: 6 (lower is better)
Translates to: FHSNTAVQEHLG*ILYCGLQDRNL
Trigger: CAAGTTTCTATCTTGTAATCCACAGTAAAGGATCCACCCCAAGTGCTCCTGCACAGCAGTGTTGCTGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS CAA 72 bp ATCCTTTACTGTGGATTACAAGATAGAAACTTGTACTaGCCACTTCCCAGGGACCTAAGCTGGCAACCACCA +
Preference number: 6 (lower is better)
Translates to: ILYCGLQDRNLY*PLPRDLSWQPP
Trigger: TGGTGGTTGCCAGCTTAGGTCCCTGGGAAGTGGCAAGTACAAGTTTCTATCTTGTAATCCACAGTAAAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS CAA 72 bp ACTTTGGGCAACTCTATTTTTGTGGTGAGAAAGTCCTaGCTGAAGGTCACACAGCCGGTTCTTAGCACTCAT +
Preference number: 6 (lower is better)
Translates to: TLGNSIFVVRKS*LKVTQPVLSTH
Trigger: ATGAGTGCTAAGAACCGGCTGTGTGACCTTCAGCAAGGACTTTCTCACCACAAAAATAGAGTTGCCCAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517413.5
CDS TCA 72 bp TCAGTCTCAGTGACTTTATGCTCTGGGTTCAGCACTTaGGCTTCGCTCTTATCAAAAGCTGGCACCATTAAA +
Preference number: 6 (lower is better)
Translates to: SVSVTLCSGFST*ASLLSKAGTIK
Trigger: TTTAATGGTGCCAGCTTTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGAGCATAAAGTCACTGAGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 72 bp GCTGAGTTAGAAGAACTGGCTTTGTCAACATCTTCCTaGTTCGATTTCACGGCAGATGTTGTTCTTGGAACC +
Preference number: 6 (lower is better)
Translates to: AELEELALSTSS*FDFTADVVLGT
Trigger: GGTTCCAAGAACAACATCTGCCGTGAAATCGAATCAGGAAGATGTTGACAAAGCCAGTTCTTCTAACTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS GCA 72 bp AGAACTCTTGTAATGCAGAATCATTGGGGACTTCCATaGCATCAGAAACTGGTGTTAGTGCTTGTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: RTLVMQNHWGLP*HQKLVLVLVSP
Trigger: AGGAGACACAAGCACTAACACCAGTTTCTGATGGCATGGAAGTCCCCAATGATTCTGCATTACAAGAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS GCA 72 bp ATAATCGGCCAACATCCGCTTGAGAAATACCTGTTCTaGCTTCTCTGTGGCAGATATTCCAATAGAGCTCTT +
Preference number: 6 (lower is better)
Translates to: IIGQHPLEKYLF*LLCGRYSNRAL
Trigger: AAGAGCTCTATTGGAATATCTGCCACAGAGAAGGCAGAACAGGTATTTCTCAAGCGGATGTTGGCCGATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517818.5
ENST00000518713.5
CDS CCA 72 bp CATTTGTGTGTCTTCAGTCTCAGTGACTTTATGCTCTaGGTTCAGCACTTGAGCTTCGCTCTTATCAAAAGC +
Preference number: 6 (lower is better)
Translates to: HLCVFSLSDFML*VQHLSFALIKS
Trigger: GCTTTTGATAAGAGCGAAGCTCAAGTGCTGAACCCAGAGCATAAAGTCACTGAGACTGAAGACACACAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CCA 72 bp GAAGCAATCCTTTGGCCGTCAGTCGTATGTGAATGGTaGATAAGGAGAATTTGGGAGACAACAACATGTCTT +
Preference number: 6 (lower is better)
Translates to: EAILWPSVVCEW*IRRIWETTTCL
Trigger: AAGACATGTTGTTGTCTCCCAAATTCTCCTTATCCACCATTCACATACGACTGACGGCCAAAGGATTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS CCA 72 bp TTCGAAGCAATCCTTTGGCCGTCAGTCGTATGTGAATaGTGGATAAGGAGAATTTGGGAGACAACAACATGT +
Preference number: 6 (lower is better)
Translates to: FEAILWPSVVCE*WIRRIWETTTC
Trigger: ACATGTTGTTGTCTCCCAAATTCTCCTTATCCACCATTCACATACGACTGACGGCCAAAGGATTGCTTCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS CAA 72 bp GTGGGTTCTAGGACTGGTGTTGACATGCACATCGTTTaGTCTGTGCTAATGACCATATCATTTGCATCCCAA +
Preference number: 6 (lower is better)
Translates to: VGSRTGVDMHIV*SVLMTISFASQ
Trigger: TTGGGATGCAAATGATATGGTCATTAGCACAGACAAAACGATGTGCATGTCAACACCAGTCCTAGAACCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 72 bp AGTCAGGCTTGGATATATTCCTACCTGAGGTGGTCGTaGTTTTTGAAGCAGAGCCCAAAAACAGAGAACCAT +
Preference number: 6 (lower is better)
Translates to: SQAWIYSYLRWS*FLKQSPKTENH
Trigger: ATGGTTCTCTGTTTTTGGGCTCTGCTTCAAAAACAACGACCACCTCAGGTAGGAATATATCCAAGCCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 72 bp GTTGAAGCAGTGACCCAGTGCCTGACCACAGTAACTTaGCAGATAAATTGTATAACTGTTACGGCTTGCAAG +
Preference number: 6 (lower is better)
Translates to: VEAVTQCLTTVT*QINCITVTACK
Trigger: CTTGCAAGCCGTAACAGTTATACAATTTATCTGCAAAGTTACTGTGGTCAGGCACTGGGTCACTGCTTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522757.5
CDS CAA 90 bp GTTACTTTTGTGGGTTCTAGGACTGGTGTTGACATGCACATCGTTTaGTCTGTGCTAATGACCATATCATTTGCATCCCAAGTCAGTCCA +
Preference number: 6 (lower is better)
Translates to: VTFVGSRTGVDMHIV*SVLMTISFASQVSP
Trigger: TGGACTGACTTGGGATGCAAATGATATGGTCATTAGCACAGACAAAACGATGTGCATGTCAACACCAGTCCTAGAACCCACAAAAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 90 bp TACATTTCTCCGTCGCTTCAATCGGTGAAACAGAAAAGGTTACTTTaGTGGGTTCTAGGACTGGTGTTGACATGCACATCGTTTTGTCTG +
Preference number: 6 (lower is better)
Translates to: YISPSLQSVKQKRLL*WVLGLVLTCTSFCL
Trigger: CAGACAAAACGATGTGCATGTCAACACCAGTCCTAGAACCCACAAAAGTAACCTTTTCTGTTTCACCGATTGAAGCGACGGAGAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 72 bp CTAGTCTTTGTTGTGATCCATCTGTGTACTCACTGGTaGCCTTTCCTGAAGAACATGCACACTGATTTCCAA +
Preference number: 6 (lower is better)
Translates to: LVFVVIHLCTHW*PFLKNMHTDFQ
Trigger: TTGGAAATCAGTGTGCATGTTCTTCAGGAAAGGTCACCAGTGAGTACACAGATGGATCACAACAAAGACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000523718.5
CDS TCA 72 bp CGATTTCACGGCAGATGTTGTTCTTGGAACCCTGTGTaGAGCATTTTTAGAATGAGTTGTAACATGCACAGC +
Preference number: 6 (lower is better)
Translates to: RFHGRCCSWNPV*SIFRMSCNMHS
Trigger: GCTGTGCATGTTACAACTCATTCTAAAAATGCTTCACACAGGGTTCCAAGAACAACATCTGCCGTGAAATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 72 bp ATTTTGGGTTCCCAAATCCTTTCCTTTGGAGACCATTaGTGTGTCTTCAGTCTCAGTGACTTTATGCTCTGG +
Preference number: 6 (lower is better)
Translates to: ILGSQILSFGDH*CVFSLSDFMLW
Trigger: CCAGAGCATAAAGTCACTGAGACTGAAGACACACAAATGGTCTCCAAAGGAAAGGATTTGGGAACCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 72 bp TTCAATTCTTCATTCTCCTGCTGGAAACGCTTCAATTaGTCAACCAATGCTGTGTTGTTGTCCACCTTGGCA +
Preference number: 6 (lower is better)
Translates to: FNSSFSCWKRFN*STNAVLLSTLA
Trigger: TGCCAAGGTGGACAACAACACAGCATTGGTTGACAAATTGAAGCGTTTCCAGCAGGAGAATGAAGAATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518889.1
CDS CAA 72 bp GACCCAGTGCCTGACCACAGTAACTTTGCAGATAAATaGTATAACTGTTACGGCTTGCAAGAGTCCATTGAT +
Preference number: 6 (lower is better)
Translates to: DPVPDHSNFADK*YNCYGLQESID
Trigger: ATCAATGGACTCTTGCAAGCCGTAACAGTTATACAATTTATCTGCAAAGTTACTGTGGTCAGGCACTGGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522757.5
CDS CAA 90 bp CCTGACCACAGTAACTTTGCAGATAAATTGTATAACTGTTACGGCTaGCAAGAGTCCATTGATTCCAGTGTGTTTGAAGACTCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: PDHSNFADKLYNCYG*QESIDSSVFEDSWK
Trigger: CTTCCAGGAGTCTTCAAACACACTGGAATCAATGGACTCTTGCAAGCCGTAACAGTTATACAATTTATCTGCAAAGTTACTGTGGTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522757.5
CDS TCA 72 bp ATGCTGTGTAAGTCATGTCTTGGGCTTCTGATGGTGTaGCTTGAGGGTTTTCAAAGCTTTCTCTATCATAAG +
Preference number: 6 (lower is better)
Translates to: MLCKSCLGLLMV*LEGFQSFLYHK
Trigger: CTTATGATAGAGAAAGCTTTGAAAACCCTCAAGTCACACCATCAGAAGCCCAAGACATGACTTACACAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000523718.5
CDS TCA 72 bp GTTGTTCTTGGAACCCTGTGTGAAGCATTTTTAGAATaGGTTGTAACATGCACAGCCTGGCTAGTAATGAGT +
Preference number: 6 (lower is better)
Translates to: VVLGTLCEAFLE*VVTCTAWLVMS
Trigger: ACTCATTACTAGCCAGGCTGTGCATGTTACAACTCATTCTAAAAATGCTTCACACAGGGTTCCAAGAACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS TCA 72 bp AGATTAAATGATTTGTTGTTCCCTTTATGCAAAAGGTaGCGTGAGGCATCATCGAAGGTAAGGGAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: RLNDLLFPLCKR*REASSKVRECS
Trigger: TGAGCACTCCCTTACCTTCGATGATGCCTCACGTCACCTTTTGCATAAAGGGAACAACAAATCATTTAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518755.1
CDS GCA 72 bp CAAGTGTTTCTGGCTTCCGTTTTCACTTTCAGATGTTaGCAAAATGATGCTCTTCCTCTGAATACAATCTCC +
Preference number: 6 (lower is better)
Translates to: QVFLASVFTFRC*QNDALPLNTIS
Trigger: GGAGATTGTATTCAGAGGAAGAGCATCATTTTGGCAACATCTGAAAGTGAAAACGGAAGCCAGAAACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297488.10
CDS CCA 72 bp GGGATAAACAAAAGAACTCTTGTAATGCAGAATCATTaGGGACTTCCATGCCATCAGAAACTGGTGTTAGTG +
Preference number: 6 (lower is better)
Translates to: GINKRTLVMQNH*GLPCHQKLVLV
Trigger: CACTAACACCAGTTTCTGATGGCATGGAAGTCCCCAATGATTCTGCATTACAAGAGTTCTTTTGTTTATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 72 bp CTGGCTGAAGAGTTTTGTGTAGGTGGTGATTTCGGGTaGTATGCATGTGTATTTCCATCTTTATCACTGGTA +
Preference number: 6 (lower is better)
Translates to: LAEEFCVGGDFG*YACVFPSLSLV
Trigger: TACCAGTGATAAAGATGGAAATACACATGCATACAACCCGAAATCACCACCTACACAAAACTCTTCAGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000518755.1
ENST00000518891.1
ENST00000519263.5
ENST00000523718.5
CDS CAA 72 bp CAAATTCAGAGTTCCCTCTTACATGCAAGCCTGATTTaGTGCCACACCTTCAAAATTCCAACAGTAAAGCTG +
Preference number: 6 (lower is better)
Translates to: QIQSSLLHASLI*CHTFKIPTVKL
Trigger: CAGCTTTACTGTTGGAATTTTGAAGGTGTGGCACAAAATCAGGCTTGCATGTAAGAGGGAACTCTGAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521882.5
ENST00000544260.3
CDS CAA 90 bp TTCACACTGCTGGCTGAAGAGTTTTGTGTAGGTGGTGATTTCGGGTaGTATGCATGTGTATTTCCATCTTTATCACTGGTAAAGAAGGTT +
Preference number: 6 (lower is better)
Translates to: FTLLAEEFCVGGDFG*YACVFPSLSLVKKV
Trigger: AACCTTCTTTACCAGTGATAAAGATGGAAATACACATGCATACAACCCGAAATCACCACCTACACAAAACTCTTCAGCCAGCAGTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000518755.1
ENST00000518891.1
ENST00000519263.5
ENST00000523718.5
CDS CAA 90 bp CCAGCTTTTCAAATTCAGAGTTCCCTCTTACATGCAAGCCTGATTTaGTGCCACACCTTCAAAATTCCAACAGTAAAGCTGGTAACAATC +
Preference number: 6 (lower is better)
Translates to: PAFQIQSSLLHASLI*CHTFKIPTVKLVTI
Trigger: GATTGTTACCAGCTTTACTGTTGGAATTTTGAAGGTGTGGCACAAAATCAGGCTTGCATGTAAGAGGGAACTCTGAATTTGAAAAGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521882.5
ENST00000544260.3
CDS TCA 72 bp TATTTGGGCTTCTCAGTACCTACAAGTGCAGGACACTaGCAAATAGAATCTTTATGCATATCTAACACCTGC +
Preference number: 6 (lower is better)
Translates to: YLGFSVPTSAGH*QIESLCISNTC
Trigger: GCAGGTGTTAGATATGCATAAAGATTCTATTTGTCAGTGTCCTGCACTTGTAGGTACTGAGAAGCCCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000518755.1
ENST00000519263.5
ENST00000523718.5
CDS TCA 72 bp AGTATGGAAGGACTGACTCTTTCCGATGGCATGATGTaGTATAAAGGTGCAGTTAACTTTATCCACTGTCAT +
Preference number: 6 (lower is better)
Translates to: SMEGLTLSDGMM*YKGAVNFIHCH
Trigger: ATGACAGTGGATAAAGTTAACTGCACCTTTATATCACATCATGCCATCGGAAAGAGTCAGTCCTTCCATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000523718.5
CDS TCA 72 bp AACCGTGGTTTAACAGTAAAACCAAATGTCCTAAGTTaGATACGCAAAGCAACCACATTAGGAGACGTCACA +
Preference number: 6 (lower is better)
Translates to: NRGLTVKPNVLS*IRKATTLGDVT
Trigger: TGTGACGTCTCCTAATGTGGTTGCTTTGCGTATTCAACTTAGGACATTTGGTTTTACTGTTAAACCACGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523471.5
CDS GCA 72 bp GTGTTGCAGATATTTGGGCTTCTCAGTACCTACAAGTaGAGGACACTGACAAATAGAATCTTTATGCATATC +
Preference number: 6 (lower is better)
Translates to: VLQIFGLLSTYK*RTLTNRIFMHI
Trigger: GATATGCATAAAGATTCTATTTGTCAGTGTCCTGCACTTGTAGGTACTGAGAAGCCCAAATATCTGCAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000518755.1
ENST00000519263.5
ENST00000523718.5
CDS GCA 72 bp ATCTTTGGGCTGCAACACTGCTCTAGACATAACTTTTaGTTTGACATTCTTGAAGTTTGGTCTTGGGTAACT +
Preference number: 6 (lower is better)
Translates to: IFGLQHCSRHNF*FDILEVWSWVT
Trigger: AGTTACCCAAGACCAAACTTCAAGAATGTCAAAGCAAAAGTTATGTCTAGAGCAGTGTTGCAGCCCAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 72 bp TTGTGCCTGTATGAGCTCTGTGAATGTGGTTCGCTATaGGATTCATCATGGGATAAACAAAAGAACTCTTGT +
Preference number: 6 (lower is better)
Translates to: LCLYELCECGSL*DSSWDKQKNSC
Trigger: ACAAGAGTTCTTTTGTTTATCCCATGATGAATCCAATAGCGAACCACATTCACAGAGCTCATACAGGCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000520196.5
ENST00000523718.5
CDS CAA 90 bp ATGATTTGTTGTTCCCGAATGAAGAGTAGGTCTCATTTTTCTATCTaGCAGCGTTTTCTCTGCATTCAAACTTCAGTGGCCTATATTCCT +
Preference number: 6 (lower is better)
Translates to: MICCSRMKSRSHFSI*QRFLCIQTSVAYIP
Trigger: AGGAATATAGGCCACTGAAGTTTGAATGCAGAGAAAACGCTGCAAGATAGAAAAATGAGACCTACTCTTCATTCGGGAACAACAAATCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518891.1
CDS TCA 72 bp TCAGCACAGTTGAAAGGTTTTCAGTCTAAGATGCTCTaGAGATTAAATGATTTGTTGTTCCCGAATGAAGAG +
Preference number: 6 (lower is better)
Translates to: SAQLKGFQSKML*RLNDLLFPNEE
Trigger: CTCTTCATTCGGGAACAACAAATCATTTAATCTTCAGAGCATCTTAGACTGAAAACCTTTCAACTGTGCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518891.1
CDS GCA 72 bp GTTTTCAAAGCTTTCTCTATCATAAGTAGTTTCTCTTaGATGCGTCTTATCAGAATGGGAAGATGTCCAAGT +
Preference number: 6 (lower is better)
Translates to: VFKAFSIISSFS*MRLIRMGRCPS
Trigger: ACTTGGACATCTTCCCATTCTGATAAGACGCATGCAAGAGAAACTACTTATGATAGAGAAAGCTTTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262102.10
ENST00000381869.5
ENST00000519263.5
ENST00000523718.5
CDS GCA 72 bp GTAACTTTGCAGATAAATTGTATAACTGTTACGGCTTaGAAGAGTCCATTGATTCCAGTGTGTTTGAAGACT +
Preference number: 6 (lower is better)
Translates to: VTLQINCITVTA*KSPLIPVCLKT
Trigger: AGTCTTCAAACACACTGGAATCAATGGACTCTTGCAAGCCGTAACAGTTATACAATTTATCTGCAAAGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522757.5
CDS CAA 72 bp AGTAACTTTGCAGATAAATTGTATAACTGTTACGGCTaGCAAGAGTCCATTGATTCCAGTGTGTTTGAAGAC +
Preference number: 6 (lower is better)
Translates to: SNFADKLYNCYG*QESIDSSVFED
Trigger: GTCTTCAAACACACTGGAATCAATGGACTCTTGCAAGCCGTAACAGTTATACAATTTATCTGCAAAGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522757.5
CDS TCA 72 bp TCAGCACAGTTGAAAGGTTTTCAGTCTAAGATGCTCTaGAGATTAAATGATTTGTTGTTCCCTGGAAGAAAT +
Preference number: 6 (lower is better)
Translates to: SAQLKGFQSKML*RLNDLLFPGRN
Trigger: ATTTCTTCCAGGGAACAACAAATCATTTAATCTTCAGAGCATCTTAGACTGAAAACCTTTCAACTGTGCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519263.5
CDS GCA 72 bp ACTCTTAAACCTCCAAAACACCATCACTTCAGACGATaGACTTTCGAATCCTTCATGCAAAAATATACTTTA +
Preference number: 6 (lower is better)
Translates to: TLKPPKHHHFRR*TFESFMQKYTL
Trigger: TAAAGTATATTTTTGCATGAAGGATTCGAAAGTGCATCGTCTGAAGTGATGGTGTTTTGGAGGTTTAAGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523718.5
CDS TCA 72 bp TCAGCACAGTTGAAAGGTTTTCAGTCTAAGATGCTCTaGAGATTAAATGATTTGTTGTTCCCTTTATGCAAA +
Preference number: 6 (lower is better)
Translates to: SAQLKGFQSKML*RLNDLLFPLCK
Trigger: TTTGCATAAAGGGAACAACAAATCATTTAATCTTCAGAGCATCTTAGACTGAAAACCTTTCAACTGTGCTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518755.1