RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTURN (Homo sapiens)

Ensembl gene IDs: ENSG00000180354

Ensembl transcript IDs: ENST00000324453.13, ENST00000324489.5, ENST00000409688.1, ENST00000434060.1

Found 430 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTTCTACAACCTTGAAGCACAGTGAGGAGGTTGGCCCTGCCCTCTaGCCTGAGGGGGCACTCCTGCTTCCTCCCCGCTGCCAAGGACAC +
Preference number: 1 (lower is better)
Translates to: LSTTLKHSEEVGPAL*PEGALLLPPRCQGH
Trigger: GTGTCCTTGGCAGCGGGGAGGAAGCAGGAGTGCCCCCTCAGGCCAGAGGGCAGGGCCAACCTCCTCACTGTGCTTCAAGGTTGTAGAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 90 bp ACAGTGAGGAGGTTGGCCCTGCCCTCTGGCCTGAGGGGGCACTCCTaGTTCCTCCCCGCTGCCAAGGACACCCAAGTTTGCTTTGTGATT +
Preference number: 1 (lower is better)
Translates to: TVRRLALPSGLRGHS*FLPAAKDTQVCFVI
Trigger: AATCACAAAGCAAACTTGGGTGTCCTTGGCAGCGGGGAGGAAGCAGGAGTGCCCCCTCAGGCCAGAGGGCAGGGCCAACCTCCTCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 90 bp ACTCCTGCTTCCTCCCCGCTGCCAAGGACACCCAAGTTTGCTTTGTaGTTTACCTGCCGGGTGCCTGGAGCCCCTCTCAGATCTGCCTGC +
Preference number: 1 (lower is better)
Translates to: TPASSPLPRTPKFAL*FTCRVPGAPLRSAC
Trigger: GCAGGCAGATCTGAGAGGGGCTCCAGGCACCCGGCAGGTAAATCACAAAGCAAACTTGGGTGTCCTTGGCAGCGGGGAGGAAGCAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 90 bp CACACAGTCCTTGGCCGACTTGAACTAGAACCCAGGTGTCTCTCCTaGGTCCAAGGTCAACACTCCTCCTCCCACACCGCTGCCACCTCC +
Preference number: 1 (lower is better)
Translates to: HTVLGRLELEPRCLS*VQGQHSSSHTAATS
Trigger: GGAGGTGGCAGCGGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAGTTCAAGTCGGCCAAGGACTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 90 bp TGCTTTGTGATTTACCTGCCGGGTGCCTGGAGCCCCTCTCAGATCTaGCTGCATTTGGGAAAGACAGGCTTCTCAGGCTGGCAGCTGGTT +
Preference number: 1 (lower is better)
Translates to: CFVIYLPGAWSPSQI*LHLGKTGFSGWQLV
Trigger: AACCAGCTGCCAGCCTGAGAAGCCTGTCTTTCCCAAATGCAGGCAGATCTGAGAGGGGCTCCAGGCACCCGGCAGGTAAATCACAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 90 bp AAAGAGCCCTACCAGATGAGCAGGGTTCCTGTTGGTCTCCTTGGCTaGGGGGCACTTTTAAAGTGGCAAAGCCATGCCAACACAAGGCAT +
Preference number: 1 (lower is better)
Translates to: KEPYQMSRVPVGLLG*GALLKWQSHANTRH
Trigger: ATGCCTTGTGTTGGCATGGCTTTGCCACTTTAAAAGTGCCCCCCAGCCAAGGAGACCAACAGGAACCCTGCTCATCTGGTAGGGCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 90 bp ACAGACCAGTTAGACTTGTCAAGGTCACACAGTCCTTGGCCGACTTaGACTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTC +
Preference number: 1 (lower is better)
Translates to: TDQLDLSRSHSPWPT*TRTQVSLLRPRSTL
Trigger: GAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAGTTCAAGTCGGCCAAGGACTGTGTGACCTTGACAAGTCTAACTGGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 90 bp AGAGCAGCCACAGCGCAGGAAGAAGTGAGTGTGTGGGCAAGTGTGTaGGCACGAGAAGGGATGTGCACACATTCAGAAAAAGGAAGTCTT +
Preference number: 1 (lower is better)
Translates to: RAATAQEEVSVWASV*AREGMCTHSEKGSL
Trigger: AAGACTTCCTTTTTCTGAATGTGTGCACATCCCTTCTCGTGCTCACACACTTGCCCACACACTCACTTCTTCCTGCGCTGTGGCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 90 bp CTCCCACACCGCTGCCACCTCCTGGTGAGTAAATGTGTAAGTCTGTaGAGGGTCAGGGATGTGTTTCACCATGGAACCATTTCCATAACA +
Preference number: 1 (lower is better)
Translates to: LPHRCHLLVSKCVSL*RVRDVFHHGTISIT
Trigger: TGTTATGGAAATGGTTCCATGGTGAAACACATCCCTGACCCTTCACAGACTTACACATTTACTCACCAGGAGGTGGCAGCGGTGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 90 bp ATAAGGCAGGCACAGAAGGGCAGTGTTTACAGCTGGAAGGGCAAATaGCCCTTGTTCACAGACCAGTTAGACTTGTCAAGGTCACACAGT +
Preference number: 1 (lower is better)
Translates to: IRQAQKGSVYSWKGK*PLFTDQLDLSRSHS
Trigger: ACTGTGTGACCTTGACAAGTCTAACTGGTCTGTGAACAAGGGGCATTTGCCCTTCCAGCTGTAAACACTGCCCTTCTGTGCCTGCCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 90 bp TGCCCAGTGAGCAGAAGCTATAGATATTTTACCATGGACACCCATTaGCATGGACACCACAGGCTACCAGCATTCTGGCAGGTTTCAGAA +
Preference number: 1 (lower is better)
Translates to: CPVSRSYRYFTMDTH*HGHHRLPAFWQVSE
Trigger: TTCTGAAACCTGCCAGAATGCTGGTAGCCTGTGGTGTCCATGGCAATGGGTGTCCATGGTAAAATATCTATAGCTTCTGCTCACTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 90 bp CGACACCTGTGTAATATACAGCTCACAATCACCTTTGCTCATGAATaGAGCCAATCAGAACACAGGCAGGGCTGCAAAGGGCAGTATATG +
Preference number: 1 (lower is better)
Translates to: RHLCNIQLTITFAHE*SQSEHRQGCKGQYM
Trigger: CATATACTGCCCTTTGCAGCCCTGCCTGTGTTCTGATTGGCTCCATTCATGAGCAAAGGTGATTGTGAGCTGTATATTACACAGGTGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 90 bp CCACATGTATTTTCTTCTCGAATCCCTAAAAGTTTCCTTGACTGTTaGTCCTTACTCACACACACACATAAGGCAGGCACAGAAGGGCAG +
Preference number: 1 (lower is better)
Translates to: PHVFSSRIPKSFLDC*SLLTHTHKAGTEGQ
Trigger: CTGCCCTTCTGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGAGCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAATACATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 90 bp ACACAGGCAGGGCTGCAAAGGGCAGTATATGCTCACCCCAATGGATaGAACACTAAGTTGTGTTTTACTAATAGGCTACTTGGAAGGAAA +
Preference number: 1 (lower is better)
Translates to: TQAGLQRAVYAHPNG*NTKLCFTNRLLGRK
Trigger: TTTCCTTCCAAGTAGCCTATTAGTAAAACACAACTTAGTGTTTCATCCATTGGGGTGAGCATATACTGCCCTTTGCAGCCCTGCCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 90 bp ACCATGGACACCCATTGCCATGGACACCACAGGCTACCAGCATTCTaGCAGGTTTCAGAATTACTCTCTATAAAATCTAAAAGACTTCAG +
Preference number: 1 (lower is better)
Translates to: TMDTHCHGHHRLPAF*QVSELLSIKSKRLQ
Trigger: CTGAAGTCTTTTAGATTTTATAGAGAGTAATTCTGAAACCTGCCAGAATGCTGGTAGCCTGTGGTGTCCATGGCAATGGGTGTCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 90 bp ATTAAACAGAAAATGTCGAGACAATCAGGTTTACACCGACATGCCTaGAAGATATACAAGACTCCCATAAGTTCTGTGGCCTCTGCTGCT +
Preference number: 1 (lower is better)
Translates to: IKQKMSRQSGLHRHA*KIYKTPISSVASAA
Trigger: AGCAGCAGAGGCCACAGAACTTATGGGAGTCTTGTATATCTTCCAGGCATGTCGGTGTAAACCTGATTGTCTCGACATTTTCTGTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 90 bp TGCCTGGAAGATATACAAGACTCCCATAAGTTCTGTGGCCTCTGCTaGTACTGCTTGTTTTTAATTCAAAACTTTCACAACCTAACAGGC +
Preference number: 1 (lower is better)
Translates to: CLEDIQDSHKFCGLC*YCLFLIQNFHNLTG
Trigger: GCCTGTTAGGTTGTGAAAGTTTTGAATTAAAAACAAGCAGTAGCAGCAGAGGCCACAGAACTTATGGGAGTCTTGTATATCTTCCAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 90 bp CTTTCACTGTCACTTTCTCTCTACTGGATAACAGGCCAAAAGTACTaGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATC +
Preference number: 1 (lower is better)
Translates to: LSLSLSLYWITGQKY*HSSFTFFQLFFLHI
Trigger: GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTGGCCTGTTATCCAGTAGAGAGAAAGTGACAGTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 90 bp GAAGATATACAAGACTCCCATAAGTTCTGTGGCCTCTGCTGCTACTaGTTGTTTTTAATTCAAAACTTTCACAACCTAACAGGCACATGT +
Preference number: 1 (lower is better)
Translates to: EDIQDSHKFCGLCCY*LFLIQNFHNLTGTC
Trigger: ACATGTGCCTGTTAGGTTGTGAAAGTTTTGAATTAAAAACAAGCAGTAGCAGCAGAGGCCACAGAACTTATGGGAGTCTTGTATATCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 90 bp ACATGCCTGGAAGATATACAAGACTCCCATAAGTTCTGTGGCCTCTaGTGCTACTGCTTGTTTTTAATTCAAAACTTTCACAACCTAACA +
Preference number: 1 (lower is better)
Translates to: TCLEDIQDSHKFCGL*CYCLFLIQNFHNLT
Trigger: TGTTAGGTTGTGAAAGTTTTGAATTAAAAACAAGCAGTAGCAGCAGAGGCCACAGAACTTATGGGAGTCTTGTATATCTTCCAGGCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp CAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGGTCACTTCTGAGCACCCAGGAGGGGCAGTaGCCCCACCTAGGTTACTGT +
Preference number: 2 (lower is better)
Translates to: QLHRNPTEAGVKFRSLLSTQEGQ*PHLGYC
Trigger: ACAGTAACCTAGGTGGGGTCACTGCCCCTCCTGGGT...GCTCAGAAGTGACCTGAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
3UTR-3UTR TCA 90 bp GACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTACCCAGGAGGGGCAGTaGCCCCACCTAGGTTACTGT +
Preference number: 2 (lower is better)
Translates to: DCISSLPCFPSVRSPVRTTQEGQ*PHLGYC
Trigger: ACAGTAACCTAGGTGGGGTCACTGCCCCTCCTGGGT...AGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
3UTR CAA 90 bp GAGGATCCCTACATAAGAGACTTTTCCATTGCACCATGTGCTGCTTaGGGCCTGGGAGACAGGAGTGGACACCTGAGTGCAGGTGAATCC +
Preference number: 2 (lower is better)
Translates to: EDPYIRDFSIAPCAA*GLGDRSGHLSAGES
Trigger: GGATTCACCTGCACTCAGGTGTCCACTCCTGTCTCCCAGGCCCAAAGCAGCACATGGTGCAATGGAAAAGTCTCTTATGTAGGGATCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCGCAAAGGGCAGTATATaGTCACCCCAATGGATGAAA +
Preference number: 2 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTAKGSI*SPQWMK
Trigger: TTTCATCCATTGGGGTGAGCATATACTGCCCTTTGC...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCACACTTAAAGGCTTCTaGGCCTCTCTTACCCTCTTA +
Preference number: 2 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTTLKGF*ASLTLL
Trigger: TAAGAGGGTAAGAGAGGCCCAGAAGCCTTTAAGTGT...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCACCTTTGCTCATGAATaGAGCCAATCAGAACACAGG +
Preference number: 2 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTTFAHE*SQSEHR
Trigger: CCTGTGTTCTGATTGGCTCCATTCATGAGCAAAGGT...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCCTTACTGCATTAAAGTaGAGGTTACGAAACCTGGGC +
Preference number: 2 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTLTALK*RLRNLG
Trigger: GCCCAGGTTTCGTAACCTCCACTTTAATGCAGTAAG...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCAATTCAGGTCACTTCTaGGCAAAGCTCATCACAGAT +
Preference number: 2 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTNSGHF*AKLITD
Trigger: ATCTGTGATGAGCTTTGCTCAGAAGTGACCTGAATT...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGTCAGAGCTGGCCCAGTaGACAACAAGCAATCAAGCA +
Preference number: 2 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQSELAQ*TTSNQA
Trigger: TGCTTGATTGCTTGTTGTTCACTGGGCCAGCTCTGA...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCTTCTGTGGCCTCTGCTaGTACTGCTTGTTTTTAATT +
Preference number: 2 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTFCGLC*YCLFLI
Trigger: AATTAAAAACAAGCAGTAGCAGCAGAGGCCACAGAA...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATTCTGTTTCCTACCCCTaGTGCAAAACAAAGCCCAGA +
Preference number: 2 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNSVSYP*CKTKPR
Trigger: TCTGGGCTTTGTTTTGCACCAGGGGTAGGAAACAGA...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp AGCGGGAGTGAAATTCAGGTCACTTCTGAGCAAAGCTCATCACAGATATTTTGTACCCAGGAGGGGCAGTaGCCCCACCTAGGTTACTGT +
Preference number: 2 (lower is better)
Translates to: SGSEIQVTSEQSSSQIFCTQEGQ*PHLGYC
Trigger: ACAGTAACCTAGGTGGGGTCACTGCCCCTCCTGGGT...ACAAAATATCTGTGATGAGCTTTGCTCAGAAGTGACCTGAATTTCACTCCCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
3UTR-3UTR CCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCTCTGCTAATGCTGTTTaGGATTTTGCTATGGAGATT +
Preference number: 2 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTSANAV*DFAMEI
Trigger: AATCTCCATAGCAAAATCCCAAACAGCATTAGCAGA...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGGCACGAGAAGGGATGTaGACACATTCAGAAAAAGGA +
Preference number: 2 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQAREGM*THSEKG
Trigger: TCCTTTTTCTGAATGTGTGCACATCCCTTCTCGTGC...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 90 bp GAGCAAGCTAGTGAAGCTTCCTCATTTCACTTGCAGAAGTCATTCTaGCGGCTTACTGCATTAAAGTGGAGGTTACGAAACCTGGGCGAC +
Preference number: 2 (lower is better)
Translates to: EQASEASSFHLQKSF*RLTALKWRLRNLGD
Trigger: GTCGCCCAGGTTTCGTAACCTCCACTTTAATGCAGTAAGCCGCAAGAATGACTTCTGCAAGTGAAATGAGGAAGCTTCACTAGCTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGGAATTAGCATGTTTTaGAACAGTCGAACAAGCAAG +
Preference number: 2 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNGISMF*NSRTSK
Trigger: CTTGCTTGTTCGACTGTTTCAAAACATGCTAATTCC...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp AAGATCCCACATGTATTTTCTTCTCGAATCCCTAAAAGTTTCCTTGACTGTTGCGGCTGCCAGGCTCACTaGCTGCAGCTTTGCACCATG +
Preference number: 2 (lower is better)
Translates to: KIPHVFSSRIPKSFLDCCGCQAH*LQLCTM
Trigger: CATGGTGCAAAGCTGCAGTCAGTGAGCCTGGCAGCC...GCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAATACATGTGGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCAGCCAGGCTCACTGACTaGAGCTTTGCACCATGCACA +
Preference number: 2 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSARLTD*SFAPCT
Trigger: TGTGCATGGTGCAAAGCTGCAGTCAGTGAGCCTGGC...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATCTCCTCCCACACCGCTaGCACCTCCTGGTGAGTAAA +
Preference number: 2 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNLLPHR*HLLVSK
Trigger: TTTACTCACCAGGAGGTGGCAGCGGTGTGGGAGGAG...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATGATTTACCTGCCGGGTaGCTGGAGCCCCTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNDLPAG*LEPLSD
Trigger: ATCTGAGAGGGGCTCCAGGCACCCGGCAGGTAAATC...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATCACCATGTGCTGCTTTaGGCCTGGGAGACAGGAGTG +
Preference number: 2 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNHHVLL*AWETGV
Trigger: CACTCCTGTCTCCCAGGCCCAAAGCAGCACATGGTG...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp GGTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCAATCACCTTTGCTCATaGATGGAGCCAATCAGAACA +
Preference number: 2 (lower is better)
Translates to: GAKQSPEFSSAHRMAESINHLCS*MEPIRT
Trigger: TGTTCTGATTGGCTCCATTCATGAGCAAAGGTGATT...GATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATGTCTGCTCGATATGGTaGTCAGGCTGCGGAAACCAG +
Preference number: 2 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNVCSIW*SGCGNQ
Trigger: CTGGTTTCCGCAGCCTGATCACCATATCGAGCAGAC...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp TCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTCTCACTCTCAGGTAGCCAGGCTCACTGACTaGAGCTTTGCACCATGCACA +
Preference number: 2 (lower is better)
Translates to: SSFTFFQLFFLHISHSQVARLTD*SFAPCT
Trigger: TGTGCATGGTGCAAAGCTGCAGTCAGTGAGCCTGGC...TACCTGAGAGTGAGAGATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATCATTGCACCATGTGCTaGTTTGGGCCTGGGAGACAG +
Preference number: 2 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNHCTMC*FGPGRQ
Trigger: CTGTCTCCCAGGCCCAAAGCAGCACATGGTGCAATG...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTTTACACCGACATGCCTaGAAGATATACAAGACTCCC +
Preference number: 2 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSLHRHA*KIYKTP
Trigger: GGGAGTCTTGTATATCTTCCAGGCATGTCGGTGTAA...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp GGTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCCAGTTTACCTTCCAATaGAGCAAGCTAGTGAAGCTT +
Preference number: 2 (lower is better)
Translates to: GAKQSPEFSSAHRMAESIQFTFQ*SKLVKL
Trigger: AAGCTTCACTAGCTTGCTCCATTGGAAGGTAAACTG...GATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATGAGCCCTCAGGGGCTTaGGCACTCACAGATCAACAT +
Preference number: 2 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNEPSGA*ALTDQH
Trigger: ATGTTGATCTGTGAGTGCCCAAGCCCCTGAGGGCTC...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp AAGTGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTAATTCAGGTCACTTCTaGGCAAAGCTCATCACAGAT +
Preference number: 2 (lower is better)
Translates to: KCRLHFFSAMLSLSKVTCNSGHF*AKLITD
Trigger: ATCTGTGATGAGCTTTGCTCAGAAGTGACCTGAATT...ACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
3UTR-3UTR TCA 90 bp TGGAGTACGCTGTTTTACCACGAGCAGCCGAACTCCTCACAGCACCAATCAATTGGAATTAGCATGTTTTaGAACAGTCGAACAAGCAAG +
Preference number: 2 (lower is better)
Translates to: WSTLFYHEQPNSSQHQSIGISMF*NSRTSK
Trigger: CTTGCTTGTTCGACTGTTTCAAAACATGCTAATTCC...AATTGATTGGTGCTGTGAGGAGTTCGGCTGCTCGTGGTAAAACAGCGTACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATTTCTTCTCTGCCATaGTTTCCCTCAGTAAGGTCA +
Preference number: 2 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSISSLP*FPSVRS
Trigger: TGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAAT...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCAGCTGGAAGGGCAAATaGCCCTTGTTCACAGACCAG +
Preference number: 2 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHISWKGK*PLFTDQ
Trigger: CTGGTCTGTGAACAAGGGGCATTTGCCCTTCCAGCT...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCGGCAGTGTTTACAGCTaGAAGGGCAAATGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHIGSVYS*KGKCPL
Trigger: CAAGGGGCATTTGCCCTTCCAGCTGTAAACACTGCC...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 90 bp GCAAGATCCCACATGTATTTTCTTCTCGAATCCCTAAAAGTTTCCTaGACTGTTGCTCCTTACTCACACACACACATAAGGCAGGCACAG +
Preference number: 2 (lower is better)
Translates to: ARSHMYFLLESLKVS*TVAPYSHTHIRQAQ
Trigger: CTGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGAGCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAATACATGTGGGATCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTAGTTTAAGCGGCACTTaGATTCTGGATGTTTTCATG +
Preference number: 2 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSSLSGT*ILDVFM
Trigger: CATGAAAACATCCAGAATTCAAGTGCCGCTTAAACT...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp CCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTATTCTTGCGGCTTACTaGATTAAAGTGGAGGTTACG +
Preference number: 2 (lower is better)
Translates to: PEFSSAHRMAESIYLHSIILAAY*IKVEVT
Trigger: CGTAACCTCCACTTTAATGCAGTAAGCCGCAAGAAT...AATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp AAGATCCCACATGTATTTTCTTCTCGAATCCCTAAAAGTTTCCTTGACTGTTGCTGCAGCTTTGCACCATaGACAGCCCTGCTTAGAGCA +
Preference number: 2 (lower is better)
Translates to: KIPHVFSSRIPKSFLDCCCSFAP*TALLRA
Trigger: TGCTCTAAGCAGGGCTGTGCATGGTGCAAAGCTGCA...GCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAATACATGTGGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 90 bp GTTTACCTTCCAATGGAGCAAGCTAGTGAAGCTTCCTCATTTCACTaGCAGAAGTCATTCTTGCGGCTTACTGCATTAAAGTGGAGGTTA +
Preference number: 2 (lower is better)
Translates to: VYLPMEQASEASSFH*QKSFLRLTALKWRL
Trigger: TAACCTCCACTTTAATGCAGTAAGCCGCAAGAATGACTTCTGCAAGTGAAATGAGGAAGCTTCACTAGCTTGCTCCATTGGAAGGTAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATTTCACTCTGATTCCTTaGCGTCTGCTCGATATGGTG +
Preference number: 2 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNFTLIP*RLLDMV
Trigger: CACCATATCGAGCAGACGTCAAGGAATCAGAGTGAA...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp TCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTCTCACTCTCAGGTAGAAGAGAATTTCATCTaGCCCATGAGATCGAGCCCT +
Preference number: 2 (lower is better)
Translates to: SSFTFFQLFFLHISHSQVEENFI*PMRSSP
Trigger: AGGGCTCGATCTCATGGGGCAGATGAAATTCTCTTC...TACCTGAGAGTGAGAGATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp TCCTTACTCACACACACACATAAGGCAGGCACAGAAGGGCAGTGTTTACAGCTGACTCTAAATTCAAAATaGCAAAGGCTACCAAGACAA +
Preference number: 2 (lower is better)
Translates to: SLLTHTHKAGTEGQCLQLTLNSK*QRLPRQ
Trigger: TTGTCTTGGTAGCCTTTGCCATTTTGAATTTAGAGT...CAGCTGTAAACACTGCCCTTCTGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCAACACTTAAAGGCTTCTaGGCCTCTCTTACCCTCTTA +
Preference number: 2 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSTLKGF*ASLTLL
Trigger: TAAGAGGGTAAGAGAGGCCCAGAAGCCTTTAAGTGT...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATTCTGTTTCCTACCCCTaGTGCAAAACAAAGCCCAGA +
Preference number: 2 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNSVSYP*CKTKPR
Trigger: TCTGGGCTTTGTTTTGCACCAGGGGTAGGAAACAGA...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGAGTTTAAGCGGCACTTaGATTCTGGATGTTTTCATG +
Preference number: 2 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKSLSGT*ILDVFM
Trigger: CATGAAAACATCCAGAATTCAAGTGCCGCTTAAACT...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGGGCCTCTGCTGCTACTaGTTGTTTTTAATTCAAAAC +
Preference number: 2 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKGLCCY*LFLIQN
Trigger: GTTTTGAATTAAAAACAAGCAGTAGCAGCAGAGGCC...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATAAGGACACCCAAGTTTaGTTTGTGATTTACCTGCCG +
Preference number: 2 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNKDTQV*FVIYLP
Trigger: CGGCAGGTAAATCACAAAGCAAACTTGGGTGTCCTT...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCGCTCACCCCAATGGATaGAACACTAAGTTGTGTTTT +
Preference number: 2 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHIAHPNG*NTKLCF
Trigger: AAAACACAACTTAGTGTTTCATCCATTGGGGTGAGC...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp AAGATCCCACATGTATTTTCTTCTCGAATCCCTAAAAGTTTCCTTGACTGTTGCCTTACTGCATTAAAGTaGAGGTTACGAAACCTGGGC +
Preference number: 2 (lower is better)
Translates to: KIPHVFSSRIPKSFLDCCLTALK*RLRNLG
Trigger: GCCCAGGTTTCGTAACCTCCACTTTAATGCAGTAAG...GCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAATACATGTGGGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 90 bp TTATACATGAAAGATGACAGCAACTATAAAGGAGAGAGGTTTTCGTaGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGGAG +
Preference number: 2 (lower is better)
Translates to: LYMKDDSNYKGERFS*KYTGNLILAPGHKE
Trigger: CTCCTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTCTCCTTTATAGTTGCTGTCATCTTTCATGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATGGCCTCTGCTGCTACTaGTTGTTTTTAATTCAAAAC +
Preference number: 2 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNGLCCY*LFLIQN
Trigger: GTTTTGAATTAAAAACAAGCAGTAGCAGCAGAGGCC...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCACCAGTAAGTAATTGTTaGCTAAACGATAACAGCAGT +
Preference number: 2 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSPVSNC*LNDNSS
Trigger: ACTGCTGTTATCGTTTAGCCAACAATTACTTACTGG...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp AAGATCCCACATGTATTTTCTTCTCGAATCCCTAAAAGTTTCCTTGACTGTTGCCAGTTTACCTTCCAATaGAGCAAGCTAGTGAAGCTT +
Preference number: 2 (lower is better)
Translates to: KIPHVFSSRIPKSFLDCCQFTFQ*SKLVKL
Trigger: AAGCTTCACTAGCTTGCTCCATTGGAAGGTAAACTG...GCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAATACATGTGGGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATACTGGGAGAAGTGACTaGGTCTTTATGAAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNTGRSD*VFMKKD
Trigger: ATCCTTTTTCATAAAGACCCAGTCACTTCTCCCAGT...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTATTATTTTACCCGATaGCTTAAAACTGGAGTACGC +
Preference number: 2 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHIYYFTR*LKTGVR
Trigger: GCGTACTCCAGTTTTAAGTCATCGGGTAAAATAATA...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR TCA 90 bp TCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTCTCACTCTCAGGTATATTATTTTACCCGATaGCTTAAAACTGGAGTACGC +
Preference number: 2 (lower is better)
Translates to: SSFTFFQLFFLHISHSQVYYFTR*LKTGVR
Trigger: GCGTACTCCAGTTTTAAGTCATCGGGTAAAATAATA...TACCTGAGAGTGAGAGATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR GCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTAGTGATTATCCTTTCCTaGCCTTGTATTTGCACTTGT +
Preference number: 2 (lower is better)
Translates to: LSILIIKTFPVNQANPRLVIILS*PCICTC
Trigger: ACAAGTGCAAATACAAGGGCAGGAAAGGATAATCAC...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 90 bp TTTCCAGTTATTACAGAAGTTGTTTCTGTGAGTTGTCTGAGTATCTaGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTA +
Preference number: 2 (lower is better)
Translates to: FPVITEVVSVSCLSI*IIKTFPVNQANPRL
Trigger: TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAGACAACTCACAGAAACAACTTCTGTAATAACTGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp AGGTTGGCCCTGCCCTCTGGCCTGAGGGGGCACTCCTaGTTCCTCCCCGCTGCCAAGGACACCCAAGTTTGC +
Preference number: 3 (lower is better)
Translates to: RLALPSGLRGHS*FLPAAKDTQVC
Trigger: GCAAACTTGGGTGTCCTTGGCAGCGGGGAGGAAGCAGGAGTGCCCCCTCAGGCCAGAGGGCAGGGCCAACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp ACCTGCCGGGTGCCTGGAGCCCCTCTCAGATCTGCCTaGATTTGGGAAAGACAGGCTTCTCAGGCTGGCAGC +
Preference number: 3 (lower is better)
Translates to: TCRVPGAPLRSA*IWERQASQAGS
Trigger: GCTGCCAGCCTGAGAAGCCTGTCTTTCCCAAATGCAGGCAGATCTGAGAGGGGCTCCAGGCACCCGGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp TCCTGCTTCCTCCCCGCTGCCAAGGACACCCAAGTTTaGTTTGTGATTTACCTGCCGGGTGCCTGGAGCCCC +
Preference number: 3 (lower is better)
Translates to: SCFLPAAKDTQV*FVIYLPGAWSP
Trigger: GGGGCTCCAGGCACCCGGCAGGTAAATCACAAAGCAAACTTGGGTGTCCTTGGCAGCGGGGAGGAAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 72 bp TCCTCCCCGCTGCCAAGGACACCCAAGTTTGCTTTGTaGTTTACCTGCCGGGTGCCTGGAGCCCCTCTCAGA +
Preference number: 3 (lower is better)
Translates to: SSPLPRTPKFAL*FTCRVPGAPLR
Trigger: TCTGAGAGGGGCTCCAGGCACCCGGCAGGTAAATCACAAAGCAAACTTGGGTGTCCTTGGCAGCGGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp CTTGGCCGACTTGAACTAGAACCCAGGTGTCTCTCCTaGGTCCAAGGTCAACACTCCTCCTCCCACACCGCT +
Preference number: 3 (lower is better)
Translates to: LGRLELEPRCLS*VQGQHSSSHTA
Trigger: AGCGGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAGTTCAAGTCGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp ATTTACCTGCCGGGTGCCTGGAGCCCCTCTCAGATCTaGCTGCATTTGGGAAAGACAGGCTTCTCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: IYLPGAWSPSQI*LHLGKTGFSGW
Trigger: CCAGCCTGAGAAGCCTGTCTTTCCCAAATGCAGGCAGATCTGAGAGGGGCTCCAGGCACCCGGCAGGTAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp CTCTGGCCTGAGGGGGCACTCCTGCTTCCTCCCCGCTaGCAAGGACACCCAAGTTTGCTTTGTGATTTACCT +
Preference number: 3 (lower is better)
Translates to: LWPEGALLLPPR*QGHPSLLCDLP
Trigger: AGGTAAATCACAAAGCAAACTTGGGTGTCCTTGGCAGCGGGGAGGAAGCAGGAGTGCCCCCTCAGGCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp GGACACCCAAGTTTGCTTTGTGATTTACCTGCCGGGTaGCTGGAGCCCCTCTCAGATCTGCCTGCATTTGGG +
Preference number: 3 (lower is better)
Translates to: GHPSLLCDLPAG*LEPLSDLPAFG
Trigger: CCCAAATGCAGGCAGATCTGAGAGGGGCTCCAGGCACCCGGCAGGTAAATCACAAAGCAAACTTGGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 72 bp CCTCCCTCCCTGGCTCCGTACTTCACTCTGATTCCTTaGCGTCTGCTCGATATGGTGATCAGGCTGCGGAAA +
Preference number: 3 (lower is better)
Translates to: PPSLAPYFTLIP*RLLDMVIRLRK
Trigger: TTTCCGCAGCCTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGGGAGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 72 bp TACCAGATGAGCAGGGTTCCTGTTGGTCTCCTTGGCTaGGGGGCACTTTTAAAGTGGCAAAGCCATGCCAAC +
Preference number: 3 (lower is better)
Translates to: YQMSRVPVGLLG*GALLKWQSHAN
Trigger: GTTGGCATGGCTTTGCCACTTTAAAAGTGCCCCCCAGCCAAGGAGACCAACAGGAACCCTGCTCATCTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 72 bp ACCCAAGTTTGCTTTGTGATTTACCTGCCGGGTGCCTaGAGCCCCTCTCAGATCTGCCTGCATTTGGGAAAG +
Preference number: 3 (lower is better)
Translates to: TQVCFVIYLPGA*SPSQICLHLGK
Trigger: CTTTCCCAAATGCAGGCAGATCTGAGAGGGGCTCCAGGCACCCGGCAGGTAAATCACAAAGCAAACTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 72 bp TTAGACTTGTCAAGGTCACACAGTCCTTGGCCGACTTaGACTAGAACCCAGGTGTCTCTCCTGCGTCCAAGG +
Preference number: 3 (lower is better)
Translates to: LDLSRSHSPWPT*TRTQVSLLRPR
Trigger: CCTTGGACGCAGGAGAGACACCTGGGTTCTAGTTCAAGTCGGCCAAGGACTGTGTGACCTTGACAAGTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 72 bp GAAAAGCCATGTCTCCACAGGCAGAGCATGTACAGCTaGGATAAGTCCTCTGGGGCCTCACCTTTCCCTTTC +
Preference number: 3 (lower is better)
Translates to: EKPCLHRQSMYS*DKSSGASPFPF
Trigger: GAAAGGGAAAGGTGAGGCCCCAGAGGACTTATCTCAGCTGTACATGCTCTGCCTGTGGAGACATGGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CAA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCTTCCTGCCCTTGTATTaGCACTTGTGCAGTTTAATG +
Preference number: 3 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTFLPLY*HLCSLM
Trigger: CATTAAACTGCACAAGTGCAAATACAAGGGCAGGAA...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CAA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGCGAGCCCTCAGGGGCTaGGGCACTCACAGATCAACA +
Preference number: 3 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKRALRG*GTHRST
Trigger: TGTTGATCTGTGAGTGCCCAAGCCCCTGAGGGCTCG...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 72 bp ACAAGGCATTGCCTCTCAACATACAGTCAGTTCCTTTaGGGAAAGCAGGCCCCCAGTGAGACAGCCGTGAAA +
Preference number: 3 (lower is better)
Translates to: TRHCLSTYSQFL*GKQAPSETAVK
Trigger: TTTCACGGCTGTCTCACTGGGGGCCTGCTTTCCTCAAAGGAACTGACTGTATGTTGAGAGGCAATGCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 72 bp GGTAGTGCAGGGGTCAGCATCCTAAAGGCAGCACCTTaGCAAGATCCCACATGTATTTTCTTCTCGAATCCC +
Preference number: 3 (lower is better)
Translates to: GSAGVSILKAAP*QDPTCIFFSNP
Trigger: GGGATTCGAGAAGAAAATACATGTGGGATCTTGCCAAGGTGCTGCCTTTAGGATGCTGACCCCTGCACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 72 bp CGCTGCCACCTCCTGGTGAGTAAATGTGTAAGTCTGTaGAGGGTCAGGGATGTGTTTCACCATGGAACCATT +
Preference number: 3 (lower is better)
Translates to: RCHLLVSKCVSL*RVRDVFHHGTI
Trigger: AATGGTTCCATGGTGAAACACATCCCTGACCCTTCACAGACTTACACATTTACTCACCAGGAGGTGGCAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 72 bp GAAAGGCTCTTTAATAGCAAGCGAATGGTAATTACATaGTCGGATGAGGTCCTCACTCTCAGGGGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: ERLFNSKRMVIT*SDEVLTLRGGR
Trigger: CCTCCCTCCCCTGAGAGTGAGGACCTCATCCGACCATGTAATTACCATTCGCTTGCTATTAAAGAGCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp AGCAGAAGCTATAGATATTTTACCATGGACACCCATTaGCATGGACACCACAGGCTACCAGCATTCTGGCAG +
Preference number: 3 (lower is better)
Translates to: SRSYRYFTMDTH*HGHHRLPAFWQ
Trigger: CTGCCAGAATGCTGGTAGCCTGTGGTGTCCATGGCAATGGGTGTCCATGGTAAAATATCTATAGCTTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp CTCATTTCACTTGCAGAAGTCATTCTTGCGGCTTACTaGATTAAAGTGGAGGTTACGAAACCTGGGCGACAC +
Preference number: 3 (lower is better)
Translates to: LISLAEVILAAY*IKVEVTKPGRH
Trigger: GTGTCGCCCAGGTTTCGTAACCTCCACTTTAATGCAGTAAGCCGCAAGAATGACTTCTGCAAGTGAAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CAA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATCCTAAAGGCAGCACCTaGGCAAGATCCCACATGTAT +
Preference number: 3 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNPKGST*ARSHMY
Trigger: ATACATGTGGGATCTTGCCAAGGTGCTGCCTTTAGG...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp TACATAAAAAGTGCAGACTGCATTTCTTCTCTGCCATaGTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAA +
Preference number: 3 (lower is better)
Translates to: YIKSADCISSLP*FPSVRSPVRTQ
Trigger: TTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCACTTTTTATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 72 bp AAAATGTCGAGACAATCAGGTTTACACCGACATGCCTaGAAGATATACAAGACTCCCATAAGTTCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: KMSRQSGLHRHA*KIYKTPISSVA
Trigger: GGCCACAGAACTTATGGGAGTCTTGTATATCTTCCAGGCATGTCGGTGTAAACCTGATTGTCTCGACATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CAA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGTTCCTGCCCTTGTATTaGCACTTGTGCAGTTTAATG +
Preference number: 3 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKFLPLY*HLCSLM
Trigger: CATTAAACTGCACAAGTGCAAATACAAGGGCAGGAA...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CAA 90 bp GATCACGGTTTTGTAATGTTATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGCTCACAATCACCTTaGCTCATGAATGGAGCCAAT +
Preference number: 3 (lower is better)
Translates to: DHGFVMLSRHDFGFQSWPSSQSP*LMNGAN
Trigger: ATTGGCTCCATTCATGAGCAAAGGTGATTGTGAGCT...GGGCCAGCTCTGAAATCCAAAATCATGCCTTGATAACATTACAAAACCGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CAA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCGCTTCCTCATTTCACTaGCAGAAGTCATTCTTGCGG +
Preference number: 3 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHIASSFH*QKSFLR
Trigger: CCGCAAGAATGACTTCTGCAAGTGAAATGAGGAAGC...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 72 bp GGGCTGCAAAGGGCAGTATATGCTCACCCCAATGGATaGAACACTAAGTTGTGTTTTACTAATAGGCTACTT +
Preference number: 3 (lower is better)
Translates to: GLQRAVYAHPNG*NTKLCFTNRLL
Trigger: AAGTAGCCTATTAGTAAAACACAACTTAGTGTTTCATCCATTGGGGTGAGCATATACTGCCCTTTGCAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp TTTTCTTCTCGAATCCCTAAAAGTTTCCTTGACTGTTaGTCCTTACTCACACACACACATAAGGCAGGCACA +
Preference number: 3 (lower is better)
Translates to: FSSRIPKSFLDC*SLLTHTHKAGT
Trigger: TGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGAGCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR GCA 72 bp GCTCAAATTAAGACTGGATCACGGATAGTGAAGATCTaGCCTAGCATTGAAGATTTACTTCCTCCTCTTCAG +
Preference number: 3 (lower is better)
Translates to: AQIKTGSRIVKI*PSIEDLLPPLQ
Trigger: CTGAAGAGGAGGAAGTAAATCTTCAATGCTAGGGCAGATCTTCACTATCCGTGATCCAGTCTTAATTTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CAA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCATTGCAGAAGTCATTCTaGCGGCTTACTGCATTAAAG +
Preference number: 3 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSLQKSF*RLTALK
Trigger: CTTTAATGCAGTAAGCCGCAAGAATGACTTCTGCAA...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR-3UTR CAA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATAGATCTGCCCTAGCATaGAAGATTTACTTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNRSALA*KIYFLL
Trigger: GAGGAGGAAGTAAATCTTCAATGCTAGGGCAGATCT...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 72 bp TCACTTTCTCTCTACTGGATAACAGGCCAAAAGTACTaGCACTCATCTTTCACTTTCTTCCAGCTATTCTTC +
Preference number: 3 (lower is better)
Translates to: SLSLYWITGQKY*HSSFTFFQLFF
Trigger: GAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTGGCCTGTTATCCAGTAGAGAGAAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR TCA 72 bp CCTAGCATTGAAGATTTACTTCCTCCTCTTCAGAGCTaGCATTTGTACTGCGCACTACTCTTATCTTTATCT +
Preference number: 3 (lower is better)
Translates to: PSIEDLLPPLQS*HLYCALLLSLS
Trigger: AGATAAAGATAAGAGTAGTGCGCAGTACAAATGTCAGCTCTGAAGAGGAGGAAGTAAATCTTCAATGCTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 72 bp GTAATGTTATCAAGGCATGATTTTGGATTTCAGAGCTaGCCCAGTGAACAACAAGCAATCAAGCATTCCTTT +
Preference number: 3 (lower is better)
Translates to: VMLSRHDFGFQS*PSEQQAIKHSF
Trigger: AAAGGAATGCTTGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATAACATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CCA 72 bp TTAGCATTACAAAGGATGTCCCCAGTAAGTAATTGTTaGCTAAACGATAACAGCAGTATTTCCAGTTATTAC +
Preference number: 3 (lower is better)
Translates to: LALQRMSPVSNC*LNDNSSISSYY
Trigger: GTAATAACTGGAAATACTGCTGTTATCGTTTAGCCAACAATTACTTACTGGGGACATCCTTTGTAATGCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 72 bp CTCCTGCTTCCTCCCCGCTGCCAAGGACACCCAAGTTaGCTTTGTGATTTACCTGCCGGGTGCCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLLPPRCQGHPS*LCDLPAGCLEP
Trigger: GGGCTCCAGGCACCCGGCAGGTAAATCACAAAGCAAACTTGGGTGTCCTTGGCAGCGGGGAGGAAGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCGGAGCTAACACCCACTaGAGGGGAGAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTGANTH*RGEGSV
Trigger: CACAGACCCCTCTCCCCTGCAGTGGGTGTTAGCTCC...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTCCTCCGGGGCCGGGCTaGGCCGGCTGGGACTGTTTA +
Preference number: 4 (lower is better)
Translates to: SAMLSLSKVTCEDSKPILPPGPG*AGWDCL
Trigger: TAAACAGTCCCAGCCGGCCCAGCCCGGCCCCGGAGG...AAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS-3UTR CCA 90 bp TCCTTACTCACACACACACATAAGGCAGGCACAGAAGGGCAGTGTTTACAGCTGACCCCCATCTGGGGGTaGTCCGCCTCTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLLTHTHKAGTEGQCLQLTPIWG*SASGSS
Trigger: AGAGGAGCCAGAGGCGGACCACCCCCAGATGGGGGT...CAGCTGTAAACACTGCCCTTCTGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATGGCTGACCCCCATCTaGGGGTGGTCCGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SSLPCFPSVRSPVRTQNLWLTPI*GWSASG
Trigger: GCCAGAGGCGGACCACCCCCAGATGGGGGTCAGCCA...TAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR CCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTATGGCTGACCCCCATCTaGGGGTGGTCCGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLWLTPI*GWSASG
Trigger: GCCAGAGGCGGACCACCCCCAGATGGGGGTCAGCCA...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR CCA 90 bp TGGAGTACGCTGTTTTACCACGAGCAGCCGAACTCCTCACAGCACCAATCAATTACGTCGGCCAGCTGCTaGAAATCCATCGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: WSTLFYHEQPNSSQHQSITSASC*KSIAAP
Trigger: CGGGGCCGCGATGGATTTCCAGCAGCTGGCCGACGT...AATTGATTGGTGCTGTGAGGAGTTCGGCTGCTCGTGGTAAAACAGCGTACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324453.13
CDS-3UTR CCA 90 bp CAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGGTCACTTCTGAGCACGTCGGCCAGCTGCTaGAAATCCATCGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QLHRNPTEAGVKFRSLLSTSASC*KSIAAP
Trigger: CGGGGCCGCGATGGATTTCCAGCAGCTGGCCGACGT...GCTCAGAAGTGACCTGAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS-3UTR GCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCAGCCCCTCTCAGATCTaGCTGCATTTGGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTSPSQI*LHLGKT
Trigger: TGTCTTTCCCAAATGCAGGCAGATCTGAGAGGGGCT...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTACCCCCATCTGGGGGTaGTCCGCCTCTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SAMLSLSKVTCEDSKPILTPIWG*SASGSS
Trigger: AGAGGAGCCAGAGGCGGACCACCCCCAGATGGGGGT...AAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR CCA 90 bp AATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGCCTCCGGGGCCGGGCTaGGCCGGCTGGGACTGTTTA +
Preference number: 4 (lower is better)
Translates to: NSKWQRLPRQLHRNPTEAPPGPG*AGWDCL
Trigger: TAAACAGTCCCAGCCGGCCCAGCCCGGCCCCGGAGG...CGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
3UTR CAA 72 bp ACCTCCCTCCCTGGCTCCGTACTTCACTCTGATTCCTaGACGTCTGCTCGATATGGTGATCAGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: TSLPGSVLHSDS*TSARYGDQAAE
Trigger: TTCCGCAGCCTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGGGAGGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 72 bp TTCTCCGAAGACTGGGTGATCAGCAATGGCATCTCTTaGGAGCTAACACCCACTGCAGGGGAGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FSEDWVISNGIS*ELTPTAGERGL
Trigger: CAGACCCCTCTCCCCTGCAGTGGGTGTTAGCTCCAAAGAGATGCCATTGCTGATCACCCAGTCTTCGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGACCCAGGAGGGGCAGTaGCCCCACCTAGGTTACTGT +
Preference number: 4 (lower is better)
Translates to: CRLHFFSAMLSLSKVTCETQEGQ*PHLGYC
Trigger: ACAGTAACCTAGGTGGGGTCACTGCCCCTCCTGGGT...CTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR TCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAAGTGAATCCACAGTGGTaGCAGGCACTACACGGGGCC +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQVNPQW*QALHGA
Trigger: GGCCCCGTGTAGTGCCTGTCACCACTGTGGATTCAC...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATAAGAGCCCTACCAGATaGGCAGGGTTCCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNKSPTR*AGFLLV
Trigger: GACCAACAGGAACCCTGCTCATCTGGTAGGGCTCTT...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGAACCTTGAAGCACAGTaGGGAGGTTGGCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQNLEAQ*GGWPCP
Trigger: AGGGCAGGGCCAACCTCCTCACTGTGCTTCAAGGTT...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCCTCTTTCTACAACCTTaGAGCACAGTGAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTLFLQP*STVRRL
Trigger: CAACCTCCTCACTGTGCTTCAAGGTTGTAGAAAGAG...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTATCTCCTCGGTGGCGATaGGCTCGAAGGGCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLSPRWR*ARRACW
Trigger: CCAACACGCCCTTCGAGCTCATCGCCACCGAGGAGA...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS-3UTR TCA 90 bp CAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCTCTCCTCGGTGGCGATaGGCTCGAAGGGCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: QRLPRQLHRNPTEAGVKFSPRWR*ARRACW
Trigger: CCAACACGCCCTTCGAGCTCATCGCCACCGAGGAGA...GAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS-3UTR GCA 90 bp AAGTGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGCAACGTCGGCCAGCTaGTGGAAATCCATCGCGGCC +
Preference number: 4 (lower is better)
Translates to: KCRLHFFSAMLSLSKVTCATSAS*WKSIAA
Trigger: GGCCGCGATGGATTTCCAGCAGCTGGCCGACGTTGC...ACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS-3UTR CCA 90 bp AAGTGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGGGGTGGTCCGCCTCTaGCTCCTCTTCTTCCACGTC +
Preference number: 4 (lower is better)
Translates to: KCRLHFFSAMLSLSKVTCGVVRL*LLFFHV
Trigger: GACGTGGAAGAAGAGGAGCCAGAGGCGGACCACCCC...ACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR CCA 90 bp AACAAGCAAGTAACATTTACACCTAACCACGAACCAGTCGCTACATACCCAGGTTGGCTGACCCCCATCTaGGGGTGGTCCGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NKQVTFTPNHEPVATYPGWLTPI*GWSASG
Trigger: GCCAGAGGCGGACCACCCCCAGATGGGGGTCAGCCA...ACCTGGGTATGTAGCGACTGGTTCGTGGTTAGGTGTAAATGTTACTTGCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp GACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCCCCAGATTTACTGCTaGCTGACCCCCATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DCISSLPCFPSVRSPVRTPQIYC*LTPIWG
Trigger: CCCCCAGATGGGGGTCAGCCAGCAGTAAATCTGGGG...AGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR TCA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTGGCTGCCAGGCTCACTaGCTGCAGCTTTGCACCATG +
Preference number: 4 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSGCQAH*LQLCTM
Trigger: CATGGTGCAAAGCTGCAGTCAGTGAGCCTGGCAGCC...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATTACAGTCAGTTCCTTTaGGGAAAGCAGGCCCCCAGT +
Preference number: 4 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNYSQFL*GKQAPS
Trigger: ACTGGGGGCCTGCTTTCCTCAAAGGAACTGACTGTA...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAAAGCCCCCAGATTTACTaGTGGCTGACCCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQSPQIY*WLTPIW
Trigger: CCAGATGGGGGTCAGCCAGCAGTAAATCTGGGGGCT...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCCACCATGCACAGCCCTaGTTAGAGCAGCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: QRLPRQLHRNPTEAGVKFHHAQP*LEQPQR
Trigger: GCGCTGTGGCTGCTCTAAGCAGGGCTGTGCATGGTG...GAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTCACCATGCACAGCCCTaGTTAGAGCAGCCACAGCGC +
Preference number: 4 (lower is better)
Translates to: SAMLSLSKVTCEDSKPILHHAQP*LEQPQR
Trigger: GCGCTGTGGCTGCTCTAAGCAGGGCTGTGCATGGTG...AAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAACTGCTTCCTCCCCGCTaGCAAGGACACCCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQLLPPR*QGHPSL
Trigger: CAAACTTGGGTGTCCTTGGCAGCGGGGAGGAAGCAG...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp AACAAGCAAGTAACATTTACACCTAACCACGAACCAGTCGCTACATACCCAGGTCTGAGGGGGCACTCCTaGTTCCTCCCCGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: NKQVTFTPNHEPVATYPGLRGHS*FLPAAK
Trigger: CTTGGCAGCGGGGAGGAAGCAGGAGTGCCCCCTCAG...ACCTGGGTATGTAGCGACTGGTTCGTGGTTAGGTGTAAATGTTACTTGCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp AACAAGCAAGTAACATTTACACCTAACCACGAACCAGTCGCTACATACCCAGGTACCCCCATCTGGGGGTaGTCCGCCTCTGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NKQVTFTPNHEPVATYPGTPIWG*SASGSS
Trigger: AGAGGAGCCAGAGGCGGACCACCCCCAGATGGGGGT...ACCTGGGTATGTAGCGACTGGTTCGTGGTTAGGTGTAAATGTTACTTGCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CAGATGTCCTATTTCGAAGTGCTAATGCAAAATGCTAACCCAGGAGGGGCAGTGCCCCAGATTTACTGCTaGCTGACCCCCATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QMSYFEVLMQNANPGGAVPQIYC*LTPIWG
Trigger: CCCCCAGATGGGGGTCAGCCAGCAGTAAATCTGGGG...CACTGCCCCTCCTGGGTTAGCATTTTGCATTAGCACTTCGAAATAGGACATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR CCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCCTAAAGGCAGCACCTTaGCAAGATCCCACATGTATT +
Preference number: 4 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTLKAAP*QDPTCI
Trigger: AATACATGTGGGATCTTGCCAAGGTGCTGCCTTTAG...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCGTGCTGCTTTGGGCCTaGGAGACAGGAGTGGACACC +
Preference number: 4 (lower is better)
Translates to: FSAMLSLSKVTCEDSKPIVLLWA*ETGVDT
Trigger: GGTGTCCACTCCTGTCTCCCAGGCCCAAAGCAGCAC...GATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTAGTGCTGCTTTGGGCCTaGGAGACAGGAGTGGACACC +
Preference number: 4 (lower is better)
Translates to: SSLPCFPSVRSPVRTQNLVLLWA*ETGVDT
Trigger: GGTGTCCACTCCTGTCTCCCAGGCCCAAAGCAGCAC...TAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TGGAGTACGCTGTTTTACCACGAGCAGCCGAACTCCTCACAGCACCAATCAATTGTCTGCTCGATATGGTaGTCAGGCTGCGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: WSTLFYHEQPNSSQHQSIVCSIW*SGCGNQ
Trigger: CTGGTTTCCGCAGCCTGATCACCATATCGAGCAGAC...AATTGATTGGTGCTGTGAGGAGTTCGGCTGCTCGTGGTAAAACAGCGTACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGCCCCCAGATTTACTaGTGGCTGACCCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: QRLPRQLHRNPTEAGVKFSPQIY*WLTPIW
Trigger: CCAGATGGGGGTCAGCCAGCAGTAAATCTGGGGGCT...GAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR GCA 90 bp TCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTACTCCTCCCACACCGCTaGCACCTCCTGGTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: SSLPCFPSVRSPVRTQNLLLPHR*HLLVSK
Trigger: TTTACTCACCAGGAGGTGGCAGCGGTGTGGGAGGAG...TAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTACCCAGGTGTCTCTCCTaGGTCCAAGGTCAACACTCC +
Preference number: 4 (lower is better)
Translates to: SSLPCFPSVRSPVRTQNLPRCLS*VQGQHS
Trigger: GGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGG...TAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGAGCTGGAAGGGCAAATaGCCCTTGTTCACAGACCAG +
Preference number: 4 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQSWKGK*PLFTDQ
Trigger: CTGGTCTGTGAACAAGGGGCATTTGCCCTTCCAGCT...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATCCTCTCAGATCTGCCTaGATTTGGGAAAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNPLRSA*IWERQA
Trigger: AGCCTGTCTTTCCCAAATGCAGGCAGATCTGAGAGG...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCACTGAGGGGGCACTCCTaGTTCCTCCCCGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSLRGHS*FLPAAK
Trigger: CTTGGCAGCGGGGAGGAAGCAGGAGTGCCCCCTCAG...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGGCAACGTCGGCCAGCTaGTGGAAATCCATCGCGGCC +
Preference number: 4 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKATSAS*WKSIAA
Trigger: GGCCGCGATGGATTTCCAGCAGCTGGCCGACGTTGC...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324453.13
CDS-3UTR GCA 90 bp GACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCGTAGAAATCCATCCTaGGTTCGGTCTCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: DCISSLPCFPSVRSPVRTRRNPS*VRSPRW
Trigger: CCACCGAGGAGACCGAACGCAGGATGGATTTCTACG...AGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS-3UTR GCA 90 bp TGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGCGTAGAAATCCATCCTaGGTTCGGTCTCCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: CRLHFFSAMLSLSKVTCERRNPS*VRSPRW
Trigger: CCACCGAGGAGACCGAACGCAGGATGGATTTCTACG...CTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS-3UTR CCA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGTTTTCCAGGACTTCGTaGAGCGTCTTCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQFSRTS*SVFLPQ
Trigger: CTGCGGCAAGAAGACGCTCCACGAAGTCCTGGAAAA...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGAGCCCTCAGGGGCTTaGGCACTCACAGATCAACAT +
Preference number: 4 (lower is better)
Translates to: CRLHFFSAMLSLSKVTCEEPSGA*ALTDQH
Trigger: ATGTTGATCTGTGAGTGCCCAAGCCCCTGAGGGCTC...CTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp AACAAGCAAGTAACATTTACACCTAACCACGAACCAGTCGCTACATACCCAGGTTACCTGCCGGGTGCCTaGAGCCCCTCTCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: NKQVTFTPNHEPVATYPGYLPGA*SPSQIC
Trigger: GCAGATCTGAGAGGGGCTCCAGGCACCCGGCAGGTA...ACCTGGGTATGTAGCGACTGGTTCGTGGTTAGGTGTAAATGTTACTTGCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGGTCACTTCTGAGCAGGAGGGAGCAGAGGTaGACAGGGTGCAGTATAGGA +
Preference number: 4 (lower is better)
Translates to: QLHRNPTEAGVKFRSLLSRREQR*TGCSIG
Trigger: TCCTATACTGCACCCTGTCCACCTCTGCTCCCTCCT...GCTCAGAAGTGACCTGAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp AACAAGCAAGTAACATTTACACCTAACCACGAACCAGTCGCTACATACCCAGGTACCCAGGAGGGGCAGTaGCCCCACCTAGGTTACTGT +
Preference number: 4 (lower is better)
Translates to: NKQVTFTPNHEPVATYPGTQEGQ*PHLGYC
Trigger: ACAGTAACCTAGGTGGGGTCACTGCCCCTCCTGGGT...ACCTGGGTATGTAGCGACTGGTTCGTGGTTAGGTGTAAATGTTACTTGCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTACAGAGCATGTACAGCTaGGATAAGTCCTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLQSMYS*DKSSGA
Trigger: GGCCCCAGAGGACTTATCTCAGCTGTACATGCTCTG...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCGTCTGCTCGATATGGTaGTCAGGCTGCGGAAACCAG +
Preference number: 4 (lower is better)
Translates to: QRLPRQLHRNPTEAGVKFVCSIW*SGCGNQ
Trigger: CTGGTTTCCGCAGCCTGATCACCATATCGAGCAGAC...GAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTAACACCTGAGTGCAGGTaGATCCACAGTGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: SSLPCFPSVRSPVRTQNLTPECR*IHSGDR
Trigger: CCTGTCACCACTGTGGATTCACCTGCACTCAGGTGT...TAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAACAGGAGTGGACACCTaGGTGCAGGTGAATCCACAG +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLTGVDT*VQVNPQ
Trigger: CTGTGGATTCACCTGCACTCAGGTGTCCACTCCTGT...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TCCTTACTCACACACACACATAAGGCAGGCACAGAAGGGCAGTGTTTACAGCTGCCCAAGTTTGCTTTGTaGTTTACCTGCCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SLLTHTHKAGTEGQCLQLPKFAL*FTCRVP
Trigger: AGGCACCCGGCAGGTAAATCACAAAGCAAACTTGGG...CAGCTGTAAACACTGCCCTTCTGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TCCTTACTCACACACACACATAAGGCAGGCACAGAAGGGCAGTGTTTACAGCTGAATTACATGGTCGGATaGGGTCCTCACTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLLTHTHKAGTEGQCLQLNYMVG*GPHSQG
Trigger: CCCCTGAGAGTGAGGACCTCATCCGACCATGTAATT...CAGCTGTAAACACTGCCCTTCTGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGGTCACTTCTGAGCCTCTCACTCCACACGTaGTCACCTGCTCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: QLHRNPTEAGVKFRSLLSLSLHT*SPALFI
Trigger: GATGAACAGAGCAGGTGAGCACGTGTGGAGTGAGAG...GCTCAGAAGTGACCTGAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324489.5
CDS-3UTR GCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAATGCAGCTTTGCACCATaGACAGCCCTGCTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQCSFAP*TALLRA
Trigger: TGCTCTAAGCAGGGCTGTGCATGGTGCAAAGCTGCA...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTGCCAGGCTCACTGACTaGAGCTTTGCACCATGCACA +
Preference number: 4 (lower is better)
Translates to: SAMLSLSKVTCEDSKPILARLTD*SFAPCT
Trigger: TGTGCATGGTGCAAAGCTGCAGTCAGTGAGCCTGGC...AAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGAAGAGAATTTCATCTaGCCCATGAGATCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNEENFI*PMRSSP
Trigger: AGGGCTCGATCTCATGGGGCAGATGAAATTCTCTTC...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTCATTGCACCATGTGCTaGTTTGGGCCTGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSHCTMC*FGPGRQ
Trigger: CTGTCTCCCAGGCCCAAAGCAGCACATGGTGCAATG...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAATTCCATTGCACCATGTaGTGCTTTGGGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQFHCTM*CFGPGR
Trigger: TCTCCCAGGCCCAAAGCAGCACATGGTGCAATGGAA...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGCCAACACAAGGCATTaGCTCTCAACATACAGTCAG +
Preference number: 4 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNANTRH*LSTYSQ
Trigger: CTGACTGTATGTTGAGAGGCAATGCCTTGTGTTGGC...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTGATTTACCTGCCGGGTaGCTGGAGCCCCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: PEFSSAHRMAESIYLHSIDLPAG*LEPLSD
Trigger: ATCTGAGAGGGGCTCCAGGCACCCGGCAGGTAAATC...AATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAAACCATGGACACCCATTaGCATGGACACCACAGGCTA +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQTMDTH*HGHHRL
Trigger: TAGCCTGTGGTGTCCATGGCAATGGGTGTCCATGGT...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TGGAGTACGCTGTTTTACCACGAGCAGCCGAACTCCTCACAGCACCAATCAATTGGCAGTGTTTACAGCTaGAAGGGCAAATGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: WSTLFYHEQPNSSQHQSIGSVYS*KGKCPL
Trigger: CAAGGGGCATTTGCCCTTCCAGCTGTAAACACTGCC...AATTGATTGGTGCTGTGAGGAGTTCGGCTGCTCGTGGTAAAACAGCGTACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCTCACTTTCTCTCTACTaGATAACAGGCCAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTSLSLY*ITGQKY
Trigger: GTACTTTTGGCCTGTTATCCAGTAGAGAGAAAGTGA...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp ATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGCACCATGTGCTGCTTTaGGCCTGGGAGACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: IQNGKGYQDNSIETPLKRHHVLL*AWETGV
Trigger: CACTCCTGTCTCCCAGGCCCAAAGCAGCACATGGTG...CCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCTTCGTTGAAGTACACTaGAAATCTAATTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTFVEVH*KSNSGT
Trigger: GGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAA...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCATACCTGCCGGGTGCCTaGAGCCCCTCTCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSYLPGA*SPSQIC
Trigger: GCAGATCTGAGAGGGGCTCCAGGCACCCGGCAGGTA...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTGCTCGAAGGGCGTGTTaGAGCACCATTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: SAMLSLSKVTCEDSKPILARRAC*STISPQ
Trigger: TTGCGGAGAAATGGTGCTCCAACACGCCCTTCGAGC...AAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
3UTR CAA 72 bp TACATAAGAGACTTTTCCATTGCACCATGTGCTGCTTaGGGCCTGGGAGACAGGAGTGGACACCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: YIRDFSIAPCAA*GLGDRSGHLSA
Trigger: TGCACTCAGGTGTCCACTCCTGTCTCCCAGGCCCAAAGCAGCACATGGTGCAATGGAAAAGTCTCTTATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTAAAGCAGGCCCCCAGTaGGACAGCCGTGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSKAGPQ*DSRENE
Trigger: TTCATTTTCACGGCTGTCTCACTGGGGGCCTGCTTT...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCAAAGCAGGCCCCCAGTaGGACAGCCGTGAAAATGAA +
Preference number: 4 (lower is better)
Translates to: FSAMLSLSKVTCEDSKPIKAGPQ*DSRENE
Trigger: TTCATTTTCACGGCTGTCTCACTGGGGGCCTGCTTT...GATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAACCTCCTCTTCAGAGCTaGCATTTGTACTGCGCACTA +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQPPLQS*HLYCAL
Trigger: TAGTGCGCAGTACAAATGTCAGCTCTGAAGAGGAGG...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGGTCACTTCTGAGCCCACACGTGCTCACCTaGTCTGTTCATCATCAGATC +
Preference number: 4 (lower is better)
Translates to: QLHRNPTEAGVKFRSLLSPHVLT*SVHHQI
Trigger: GATCTGATGATGAACAGAGCAGGTGAGCACGTGTGG...GCTCAGAAGTGACCTGAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324489.5
CDS-3UTR GCA 90 bp CAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCCGTGGAGCGTCTTCTTaGCGCAGGAGGAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: QRLPRQLHRNPTEAGVKFRGASS*RRRRCN
Trigger: ATTACATCTCCTCCTGCGGCAAGAAGACGCTCCACG...GAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp ATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGCATTGCACCATGTGCTaGTTTGGGCCTGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: IQNGKGYQDNSIETPLKRHCTMC*FGPGRQ
Trigger: CTGTCTCCCAGGCCCAAAGCAGCACATGGTGCAATG...CCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CTAGAACCCAGGTGTCTCTCCTGCGTCCAAGGTCAACACTCCTCCTCCCACACCGGTCCATGTACATTGTaGTCTTATGAAACAGAAACA +
Preference number: 4 (lower is better)
Translates to: LEPRCLSCVQGQHSSSHTGPCTL*SYETET
Trigger: TGTTTCTGTTTCATAAGAGCACAATGTACATGGACC...GGTGTGGGAGGAGGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGGTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGAAAGTGGCAAAGCCATaGCAACACAAGGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQKVAKP*QHKALP
Trigger: AGGCAATGCCTTGTGTTGGCATGGCTTTGCCACTTT...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTATTTTCCAGGACTTCGTaGAGCGTCTTCTTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLFSRTS*SVFLPQ
Trigger: CTGCGGCAAGAAGACGCTCCACGAAGTCCTGGAAAA...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp ATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAATACACCCCAGATTTACTGCTaGCTGACCCCCATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: MLSLSKVTCEDSKPILNTPQIYC*LTPIWG
Trigger: CCCCCAGATGGGGGTCAGCCAGCAGTAAATCTGGGG...TGTATTAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR CCA 90 bp GGTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCCATCAGCCCACAGAATaGCCGAGTCTATCTATCTCC +
Preference number: 4 (lower is better)
Translates to: GAKQSPEFSSAHRMAESIHQPTE*PSLSIS
Trigger: GGAGATAGATAGACTCGGCCATTCTGTGGGCTGATG...GATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCGGCAGTGTTTACAGCTaGAAGGGCAAATGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: QRLPRQLHRNPTEAGVKFGSVYS*KGKCPL
Trigger: CAAGGGGCATTTGCCCTTCCAGCTGTAAACACTGCC...GAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTGAGCCCTCAGGGGCTTaGGCACTCACAGATCAACAT +
Preference number: 4 (lower is better)
Translates to: PEFSSAHRMAESIYLHSIEPSGA*ALTDQH
Trigger: ATGTTGATCTGTGAGTGCCCAAGCCCCTGAGGGCTC...AATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAAAATTCCAATGACACTTaGGACCACAGCTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQNSNDT*DHSSPR
Trigger: CCTAGGGGAGCTGTGGTCCCAAGTGTCATTGGAATT...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGACAGGCTTCTCAGGCTaGCAGCTGGTTTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: CRLHFFSAMLSLSKVTCETGFSG*QLVLLK
Trigger: CTTCAGTAAAACCAGCTGCCAGCCTGAGAAGCCTGT...CTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp AAGTGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGGCTTCTCCGAAGACTaGGTGATCAGCAATGGCATC +
Preference number: 4 (lower is better)
Translates to: KCRLHFFSAMLSLSKVTCGFSED*VISNGI
Trigger: GATGCCATTGCTGATCACCCAGTCTTCGGAGAAGCC...ACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTGGCTTCTCCGAAGACTaGGTGATCAGCAATGGCATC +
Preference number: 4 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSGFSED*VISNGI
Trigger: GATGCCATTGCTGATCACCCAGTCTTCGGAGAAGCC...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGACACAAAGTGGGTACTaGAGCACAGATGGAAATCAC +
Preference number: 4 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQTQSGY*STDGNH
Trigger: GTGATTTCCATCTGTGCTTCAGTACCCACTTTGTGT...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCAGTGTGGGCAAGTGTGTaGGCACGAGAAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSVWASV*AREGMC
Trigger: GCACATCCCTTCTCGTGCTCACACACTTGCCCACAC...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCGGCTGCCAGGCTCACTaGCTGCAGCTTTGCACCATG +
Preference number: 4 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHIGCQAH*LQLCTM
Trigger: CATGGTGCAAAGCTGCAGTCAGTGAGCCTGGCAGCC...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTTTCACTCTGATTCCTTaGCGTCTGCTCGATATGGTG +
Preference number: 4 (lower is better)
Translates to: DCISSLPCFPSVRSPVRTFTLIP*RLLDMV
Trigger: CACCATATCGAGCAGACGTCAAGGAATCAGAGTGAA...AGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCGTGAATCCACAGTGGTaGCAGGCACTACACGGGGCC +
Preference number: 4 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHIVNPQW*QALHGA
Trigger: GGCCCCGTGTAGTGCCTGTCACCACTGTGGATTCAC...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGCTCTTTCTACAACCTTaGAGCACAGTGAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: CRLHFFSAMLSLSKVTCELFLQP*STVRRL
Trigger: CAACCTCCTCACTGTGCTTCAAGGTTGTAGAAAGAG...CTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTATCTCCGAAGACTGGGTaGTCAGCAATGGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLSPKTG*SAMASL
Trigger: AAGAGATGCCATTGCTGATCACCCAGTCTTCGGAGA...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTACCTCCTCTTCAGAGCTaGCATTTGTACTGCGCACTA +
Preference number: 4 (lower is better)
Translates to: SSLPCFPSVRSPVRTQNLPPLQS*HLYCAL
Trigger: TAGTGCGCAGTACAAATGTCAGCTCTGAAGAGGAGG...TAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATATTCTTGCGGCTTACTaGATTAAAGTGGAGGTTACG +
Preference number: 4 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNILAAY*IKVEVT
Trigger: CGTAACCTCCACTTTAATGCAGTAAGCCGCAAGAAT...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp ATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAATACACCCAGGTGTCTCTCCTaGGTCCAAGGTCAACACTCC +
Preference number: 4 (lower is better)
Translates to: MLSLSKVTCEDSKPILNTPRCLS*VQGQHS
Trigger: GGAGTGTTGACCTTGGACGCAGGAGAGACACCTGGG...TGTATTAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAACCCCAAGTTAAGTCCTaGCTATTCCTTCATGCCTCT +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQPQVKS*LFLHAS
Trigger: AGAGGCATGAAGGAATAGGCAGGACTTAACTTGGGG...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCCTTACTCACACACACACATAAGGCAGGCACAGAAGGGCAGTGTTTACAGCTGAAAGTGGCAAAGCCATaGCAACACAAGGCATTGCCT +
Preference number: 4 (lower is better)
Translates to: SLLTHTHKAGTEGQCLQLKVAKP*QHKALP
Trigger: AGGCAATGCCTTGTGTTGGCATGGCTTTGCCACTTT...CAGCTGTAAACACTGCCCTTCTGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAAGCCCCTCTCAGATCTaGCTGCATTTGGGAAAGACA +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLSPSQI*LHLGKT
Trigger: TGTCTTTCCCAAATGCAGGCAGATCTGAGAGGGGCT...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp GATCACGGTTTTGTAATGTTATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCCTGCTTCCTCCCCGCTaGCAAGGACACCCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: DHGFVMLSRHDFGFQSWPLLPPR*QGHPSL
Trigger: CAAACTTGGGTGTCCTTGGCAGCGGGGAGGAAGCAG...GGGCCAGCTCTGAAATCCAAAATCATGCCTTGATAACATTACAAAACCGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTCATCAGCCCACAGAATaGCCGAGTCTATCTATCTCC +
Preference number: 4 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSHQPTE*PSLSIS
Trigger: GGAGATAGATAGACTCGGCCATTCTGTGGGCTGATG...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp GACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTTCTGTTTCCTACCCCTaGTGCAAAACAAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: DCISSLPCFPSVRSPVRTSVSYP*CKTKPR
Trigger: TCTGGGCTTTGTTTTGCACCAGGGGTAGGAAACAGA...AGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAACTGGGTGATCAGCAATaGCATCTCTTTGGAGCTAAC +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQLGDQQ*HLFGAN
Trigger: GTTAGCTCCAAAGAGATGCCATTGCTGATCACCCAG...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 72 bp GGCGACACCTGTGTAATATACAGCTCACAATCACCTTaGCTCATGAATGGAGCCAATCAGAACACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GDTCVIYSSQSP*LMNGANQNTGR
Trigger: CCTGCCTGTGTTCTGATTGGCTCCATTCATGAGCAAAGGTGATTGTGAGCTGTATATTACACAGGTGTCGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATGTGTGGGCAAGTGTGTaGGCACGAGAAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNVWASV*AREGMC
Trigger: GCACATCCCTTCTCGTGCTCACACACTTGCCCACAC...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGCTCCGTACTTCACTCTaGTTCCTTGACGTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKLRTSL*FLDVCS
Trigger: CGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAG...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GATCACGGTTTTGTAATGTTATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAAGAGCCCTACCAGATaGGCAGGGTTCCTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: DHGFVMLSRHDFGFQSWPKSPTR*AGFLLV
Trigger: GACCAACAGGAACCCTGCTCATCTGGTAGGGCTCTT...GGGCCAGCTCTGAAATCCAAAATCATGCCTTGATAACATTACAAAACCGTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTTTTATAAACCTTGAAGCACAGTaGGGAGGTTGGCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FSSAHRMAESIYLHSIFINLEAQ*GGWPCP
Trigger: AGGGCAGGGCCAACCTCCTCACTGTGCTTCAAGGTT...TATAAAAATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGAATTACATGGTCGGATaGGGTCCTCACTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKNYMVG*GPHSQG
Trigger: CCCCTGAGAGTGAGGACCTCATCCGACCATGTAATT...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp AACAAGCAAGTAACATTTACACCTAACCACGAACCAGTCGCTACATACCCAGGTCGTGGAGCGTCTTCTTaGCGCAGGAGGAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: NKQVTFTPNHEPVATYPGRGASS*RRRRCN
Trigger: ATTACATCTCCTCCTGCGGCAAGAAGACGCTCCACG...ACCTGGGTATGTAGCGACTGGTTCGTGGTTAGGTGTAAATGTTACTTGCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAAGCAAAGGGCAGTATATaGTCACCCCAATGGATGAAA +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQAKGSI*SPQWMK
Trigger: TTTCATCCATTGGGGTGAGCATATACTGCCCTTTGC...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGGTCACTTCTGAGCGTTTCCTACCCCTGGTaGAAAACAAAGCCCAGAATT +
Preference number: 4 (lower is better)
Translates to: QLHRNPTEAGVKFRSLLSVSYPW*KTKPRI
Trigger: AATTCTGGGCTTTGTTTTGCACCAGGGGTAGGAAAC...GCTCAGAAGTGACCTGAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGTGCAGCTTTGCACCATaGACAGCCCTGCTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKCSFAP*TALLRA
Trigger: TGCTCTAAGCAGGGCTGTGCATGGTGCAAAGCTGCA...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCGAAGAGAATTTCATCTaGCCCATGAGATCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: FSAMLSLSKVTCEDSKPIEENFI*PMRSSP
Trigger: AGGGCTCGATCTCATGGGGCAGATGAAATTCTCTTC...GATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTTCCAAAGCCCCAGTCTaGCACAGCACAAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: PEFSSAHRMAESIYLHSISKAPV*HSTKKS
Trigger: GCTTTTCTTTGTGCTGTGGCAGACTGGGGCTTTGGA...AATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp GACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTAAGAGACTTTTCCATTaGACCATGTGCTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: DCISSLPCFPSVRSPVRTKRLFH*TMCCFG
Trigger: CCCAAAGCAGCACATGGTGCAATGGAAAAGTCTCTT...AGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp AATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGCGGTTTTCAGACATaGGGAAGGAGAAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: NSKWQRLPRQLHRNPTEAGGFQT*GRRNQS
Trigger: GCTCTGGTTTCTCCTTCCCCATGTCTGAAAACCGCC...CGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324489.5
CDS-3UTR CCA 90 bp TCCTTACTCACACACACACATAAGGCAGGCACAGAAGGGCAGTGTTTACAGCTGACACTTAAAGGCTTCTaGGCCTCTCTTACCCTCTTA +
Preference number: 4 (lower is better)
Translates to: SLLTHTHKAGTEGQCLQLTLKGF*ASLTLL
Trigger: TAAGAGGGTAAGAGAGGCCCAGAAGCCTTTAAGTGT...CAGCTGTAAACACTGCCCTTCTGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp GGTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTTACACCGACATGCCTaGAAGATATACAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: GAKQSPEFSSAHRMAESILHRHA*KIYKTP
Trigger: GGGAGTCTTGTATATCTTCCAGGCATGTCGGTGTAA...GATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAAACCTTTGCTCATGAATaGAGCCAATCAGAACACAGG +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQTFAHE*SQSEHR
Trigger: CCTGTGTTCTGATTGGCTCCATTCATGAGCAAAGGT...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGGTCACTTCTGAGCCTAAAGGCAGCACCTTaGCAAGATCCCACATGTATT +
Preference number: 4 (lower is better)
Translates to: QLHRNPTEAGVKFRSLLSLKAAP*QDPTCI
Trigger: AATACATGTGGGATCTTGCCAAGGTGCTGCCTTTAG...GCTCAGAAGTGACCTGAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTCTCACTCTCAGGTACACCATGTGCTGCTTTaGGCCTGGGAGACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: SSFTFFQLFFLHISHSQVHHVLL*AWETGV
Trigger: CACTCCTGTCTCCCAGGCCCAAAGCAGCACATGGTG...TACCTGAGAGTGAGAGATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGGTTGGTCTCCTTGGCTaGGGGGCACTTTTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKVGLLG*GALLKW
Trigger: CCACTTTAAAAGTGCCCCCCAGCCAAGGAGACCAAC...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp GGTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCAGGCTACCAGCATTCTaGCAGGTTTCAGAATTACTC +
Preference number: 4 (lower is better)
Translates to: GAKQSPEFSSAHRMAESIRLPAF*QVSELL
Trigger: GAGTAATTCTGAAACCTGCCAGAATGCTGGTAGCCT...GATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCAAGGAGGGAGCAGAGGTaGACAGGGTGCAGTATAGGA +
Preference number: 4 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSRREQR*TGCSIG
Trigger: TCCTATACTGCACCCTGTCCACCTCTGCTCCCTCCT...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCAGCTCGAAGGGCGTGTTaGAGCACCATTTCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSARRAC*STISPQ
Trigger: TTGCGGAGAAATGGTGCTCCAACACGCCCTTCGAGC...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324453.13
CDS-3UTR TCA 90 bp ATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGCCATTCCTCACCAATaGTTTCCACTGTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: IQNGKGYQDNSIETPLKRAIPHQ*FPLFTL
Trigger: CAAGGTGAACAGTGGAAATCATTGGTGAGGAATGGC...CCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324489.5
CDS-3UTR TCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTAACCCAGGAGGGGCAGTaGCCCCACCTAGGTTACTGT +
Preference number: 4 (lower is better)
Translates to: LSILIIKTFPVNQANPRLTQEGQ*PHLGYC
Trigger: ACAGTAACCTAGGTGGGGTCACTGCCCCTCCTGGGT...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGAGTTTAAGCGGCACTTaGATTCTGGATGTTTTCATG +
Preference number: 4 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQSLSGT*ILDVFM
Trigger: CATGAAAACATCCAGAATTCAAGTGCCGCTTAAACT...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGGTCACTTCTGAGCGCTCACCCCAATGGATaGAACACTAAGTTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: QLHRNPTEAGVKFRSLLSAHPNG*NTKLCF
Trigger: AAAACACAACTTAGTGTTTCATCCATTGGGGTGAGC...GCTCAGAAGTGACCTGAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAAAAATGTGTAAGTCTGTaGAGGGTCAGGGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQKCVSL*RVRDVF
Trigger: AAACACATCCCTGACCCTTCACAGACTTACACATTT...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTTTTATACAGAGCATGTACAGCTaGGATAAGTCCTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: FSSAHRMAESIYLHSIFIQSMYS*DKSSGA
Trigger: GGCCCCAGAGGACTTATCTCAGCTGTACATGCTCTG...TATAAAAATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp AATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGTCTCCGAAGACTGGGTaGTCAGCAATGGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: NSKWQRLPRQLHRNPTEASPKTG*SAMASL
Trigger: AAGAGATGCCATTGCTGATCACCCAGTCTTCGGAGA...CGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGATTTCTTCTCTGCCATaGTTTCCCTCAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: CRLHFFSAMLSLSKVTCEISSLP*FPSVRS
Trigger: TGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAAT...CTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR GCA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGGTGATTATCCTTTCCTaGCCTTGTATTTGCACTTGT +
Preference number: 4 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQVIILS*PCICTC
Trigger: ACAAGTGCAAATACAAGGGCAGGAAAGGATAATCAC...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTCTTCCTCATTTCACTTaGAGAAGTCATTCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSLPHFT*RSHSCG
Trigger: GCCGCAAGAATGACTTCTGCAAGTGAAATGAGGAAG...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp AAGATCCCACATGTATTTTCTTCTCGAATCCCTAAAAGTTTCCTTGACTGTTGCCTCCTCCCACACCGCTaGCACCTCCTGGTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: KIPHVFSSRIPKSFLDCCLLPHR*HLLVSK
Trigger: TTTACTCACCAGGAGGTGGCAGCGGTGTGGGAGGAG...GCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAATACATGTGGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCAAGAGACTTTTCCATTaGACCATGTGCTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: FSAMLSLSKVTCEDSKPIKRLFH*TMCCFG
Trigger: CCCAAAGCAGCACATGGTGCAATGGAAAAGTCTCTT...GATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTAGGAGCTAACACCCACTaGAGGGGAGAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSILIIKTFPVNQANPRLGANTH*RGEGSV
Trigger: CACAGACCCCTCTCCCCTGCAGTGGGTGTTAGCTCC...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp ATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAATACAACCATGGACACCCATTaGCATGGACACCACAGGCTA +
Preference number: 4 (lower is better)
Translates to: MLSLSKVTCEDSKPILNTTMDTH*HGHHRL
Trigger: TAGCCTGTGGTGTCCATGGCAATGGGTGTCCATGGT...TGTATTAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp AATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGAAAGAGGGCAGTGGGTaGCCATTCCTCACCAATGAT +
Preference number: 4 (lower is better)
Translates to: NSKWQRLPRQLHRNPTEAKEGSG*PFLTND
Trigger: ATCATTGGTGAGGAATGGCCACCCACTGCCCTCTTT...CGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324489.5
CDS-3UTR CCA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTACCTTTGCTCATGAATaGAGCCAATCAGAACACAGG +
Preference number: 4 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSTFAHE*SQSEHR
Trigger: CCTGTGTTCTGATTGGCTCCATTCATGAGCAAAGGT...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAACAGTTTACCTTCCAATaGAGCAAGCTAGTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQQFTFQ*SKLVKL
Trigger: AAGCTTCACTAGCTTGCTCCATTGGAAGGTAAACTG...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CAGATGTCCTATTTCGAAGTGCTAATGCAAAATGCTAACCCAGGAGGGGCAGTGAGGCTACCAGCATTCTaGCAGGTTTCAGAATTACTC +
Preference number: 4 (lower is better)
Translates to: QMSYFEVLMQNANPGGAVRLPAF*QVSELL
Trigger: GAGTAATTCTGAAACCTGCCAGAATGCTGGTAGCCT...CACTGCCCCTCCTGGGTTAGCATTTTGCATTAGCACTTCGAAATAGGACATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCGAATGGTAATTACATaGTCGGATGAGGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: FSAMLSLSKVTCEDSKPIRMVIT*SDEVLT
Trigger: AGTGAGGACCTCATCCGACCATGTAATTACCATTCG...GATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAGCTCACCCCAATGGATaGAACACTAAGTTGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLAHPNG*NTKLCF
Trigger: AAAACACAACTTAGTGTTTCATCCATTGGGGTGAGC...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp AAGTGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTAATCACCTTTGCTCATaGATGGAGCCAATCAGAACA +
Preference number: 4 (lower is better)
Translates to: KCRLHFFSAMLSLSKVTCNHLCS*MEPIRT
Trigger: TGTTCTGATTGGCTCCATTCATGAGCAAAGGTGATT...ACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAATCACCTTTGCTCATaGATGGAGCCAATCAGAACA +
Preference number: 4 (lower is better)
Translates to: QRLPRQLHRNPTEAGVKFNHLCS*MEPIRT
Trigger: TGTTCTGATTGGCTCCATTCATGAGCAAAGGTGATT...GAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTAAAATGTGTAAGTCTGTaGAGGGTCAGGGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: SSLPCFPSVRSPVRTQNLKCVSL*RVRDVF
Trigger: AAACACATCCCTGACCCTTCACAGACTTACACATTT...TAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGTTCACTCTGATTCCTTaGCGTCTGCTCGATATGGTG +
Preference number: 4 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKFTLIP*RLLDMV
Trigger: CACCATATCGAGCAGACGTCAAGGAATCAGAGTGAA...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GGTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCCAGTTTCCCAACTTGTaGATTTTAACATGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GAKQSPEFSSAHRMAESIQFPNL*ILTCKA
Trigger: GGCTTTGCATGTTAAAATTCACAAGTTGGGAAACTG...GATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTCTCACTCTCAGGTACCCAAGTTTGCTTTGTaGTTTACCTGCCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SSFTFFQLFFLHISHSQVPKFAL*FTCRVP
Trigger: AGGCACCCGGCAGGTAAATCACAAAGCAAACTTGGG...TACCTGAGAGTGAGAGATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTCTCACTCTCAGGTACCACTGTTCACCTTGTaGAGGCTAAGGGCGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SSFTFFQLFFLHISHSQVPLFTL*RLRAVF
Trigger: GAAAACCGCCCTTAGCCTGCACAAGGTGAACAGTGG...TACCTGAGAGTGAGAGATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324489.5
CDS-3UTR GCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTAAGCCCCCAGATTTACTaGTGGCTGACCCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LSILIIKTFPVNQANPRLSPQIY*WLTPIW
Trigger: CCAGATGGGGGTCAGCCAGCAGTAAATCTGGGGGCT...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CAGATGTCCTATTTCGAAGTGCTAATGCAAAATGCTAACCCAGGAGGGGCAGTGATTTCTTCTCTGCCATaGTTTCCCTCAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: QMSYFEVLMQNANPGGAVISSLP*FPSVRS
Trigger: TGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAAT...CACTGCCCCTCCTGGGTTAGCATTTTGCATTAGCACTTCGAAATAGGACATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR GCA 90 bp GGTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCGTGATTATCCTTTCCTaGCCTTGTATTTGCACTTGT +
Preference number: 4 (lower is better)
Translates to: GAKQSPEFSSAHRMAESIVIILS*PCICTC
Trigger: ACAAGTGCAAATACAAGGGCAGGAAAGGATAATCAC...GATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCCTTACTCACACACACACATAAGGCAGGCACAGAAGGGCAGTGTTTACAGCTGTTCTGTGGCCTCTGCTaGTACTGCTTGTTTTTAATT +
Preference number: 4 (lower is better)
Translates to: SLLTHTHKAGTEGQCLQLFCGLC*YCLFLI
Trigger: AATTAAAAACAAGCAGTAGCAGCAGAGGCCACAGAA...CAGCTGTAAACACTGCCCTTCTGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAATTCTGTGGCCTCTGCTaGTACTGCTTGTTTTTAATT +
Preference number: 4 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQFCGLC*YCLFLI
Trigger: AATTAAAAACAAGCAGTAGCAGCAGAGGCCACAGAA...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATTCTTGCGGCTTACTaGATTAAAGTGGAGGTTACG +
Preference number: 4 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSILAAY*IKVEVT
Trigger: CGTAACCTCCACTTTAATGCAGTAAGCCGCAAGAAT...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTTTTATAAGCTGGAAGGGCAAATaGCCCTTGTTCACAGACCAG +
Preference number: 4 (lower is better)
Translates to: FSSAHRMAESIYLHSIFISWKGK*PLFTDQ
Trigger: CTGGTCTGTGAACAAGGGGCATTTGCCCTTCCAGCT...TATAAAAATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGTTTCCTTGACTGTTaGTCCTTACTCACACACACA +
Preference number: 4 (lower is better)
Translates to: QRLPRQLHRNPTEAGVKFSFLDC*SLLTHT
Trigger: TGTGTGTGTGAGTAAGGAGCAACAGTCAAGGAAACT...GAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTACTGCCTATTCCTTCATaGCTCTCTGTAAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLLPIPS*LSVRNQ
Trigger: CTGATTTCTTACAGAGAGGCATGAAGGAATAGGCAG...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp AACAAGCAAGTAACATTTACACCTAACCACGAACCAGTCGCTACATACCCAGGTGCCAACACAAGGCATTaGCTCTCAACATACAGTCAG +
Preference number: 4 (lower is better)
Translates to: NKQVTFTPNHEPVATYPGANTRH*LSTYSQ
Trigger: CTGACTGTATGTTGAGAGGCAATGCCTTGTGTTGGC...ACCTGGGTATGTAGCGACTGGTTCGTGGTTAGGTGTAAATGTTACTTGCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTAGATTTACCTGCCGGGTaGCTGGAGCCCCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: LSILIIKTFPVNQANPRLDLPAG*LEPLSD
Trigger: ATCTGAGAGGGGCTCCAGGCACCCGGCAGGTAAATC...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp AATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGCAGAGGTGGACAGGGTaGAGTATAGGATTTACACTG +
Preference number: 4 (lower is better)
Translates to: NSKWQRLPRQLHRNPTEAQRWTG*SIGFTL
Trigger: CAGTGTAAATCCTATACTGCACCCTGTCCACCTCTG...CGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp AACAAGCAAGTAACATTTACACCTAACCACGAACCAGTCGCTACATACCCAGGTCAGAGGTGGACAGGGTaGAGTATAGGATTTACACTG +
Preference number: 4 (lower is better)
Translates to: NKQVTFTPNHEPVATYPGQRWTG*SIGFTL
Trigger: CAGTGTAAATCCTATACTGCACCCTGTCCACCTCTG...ACCTGGGTATGTAGCGACTGGTTCGTGGTTAGGTGTAAATGTTACTTGCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp AAGTGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAAAAGAACACAAAGTaGGTACTGAAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: KCRLHFFSAMLSLSKVTCEKNTK*VLKHRW
Trigger: CCATCTGTGCTTCAGTACCCACTTTGTGTTCTTTTC...ACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp AACAAGCAAGTAACATTTACACCTAACCACGAACCAGTCGCTACATACCCAGGTTCTGTTTCCTACCCCTaGTGCAAAACAAAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NKQVTFTPNHEPVATYPGSVSYP*CKTKPR
Trigger: TCTGGGCTTTGTTTTGCACCAGGGGTAGGAAACAGA...ACCTGGGTATGTAGCGACTGGTTCGTGGTTAGGTGTAAATGTTACTTGCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAACAGGCCAAAAGTACTaGCACTCATCTTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLTGQKY*HSSFTF
Trigger: GAAAGTGAAAGATGAGTGCCAGTACTTTTGGCCTGT...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp ATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGTTTGGATTTCAGAGCTaGCCCAGTGAACAACAAGCA +
Preference number: 4 (lower is better)
Translates to: IQNGKGYQDNSIETPLKRFGFQS*PSEQQA
Trigger: TGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAA...CCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGAAGGGCAACAGTTTTTaGCAACCCAATTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: CRLHFFSAMLSLSKVTCEKGNSF*QPNSQF
Trigger: AAACTGTGAATTGGGTTGCCAAAAACTGTTGCCCTT...CTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTCGAATGGTAATTACATaGTCGGATGAGGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: PEFSSAHRMAESIYLHSIRMVIT*SDEVLT
Trigger: AGTGAGGACCTCATCCGACCATGTAATTACCATTCG...AATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTTATTATTTTACCCGATaGCTTAAAACTGGAGTACGC +
Preference number: 4 (lower is better)
Translates to: DCISSLPCFPSVRSPVRTYYFTR*LKTGVR
Trigger: GCGTACTCCAGTTTTAAGTCATCGGGTAAAATAATA...AGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAAATATAAATTCCAATaGCACTTGGGACCACAGCTC +
Preference number: 4 (lower is better)
Translates to: QRLPRQLHRNPTEAGVKFKYKFQ*HLGPQL
Trigger: GAGCTGTGGTCCCAAGTGTCATTGGAATTTATATTT...GAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCAGTTTCCCAACTTGTaGATTTTAACATGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: FSAMLSLSKVTCEDSKPIQFPNL*ILTCKA
Trigger: GGCTTTGCATGTTAAAATTCACAAGTTGGGAAACTG...GATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTCTCACTCTCAGGTATCCAAAGCCCCAGTCTaGCACAGCACAAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SSFTFFQLFFLHISHSQVSKAPV*HSTKKS
Trigger: GCTTTTCTTTGTGCTGTGGCAGACTGGGGCTTTGGA...TACCTGAGAGTGAGAGATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp AAGATCCCACATGTATTTTCTTCTCGAATCCCTAAAAGTTTCCTTGACTGTTGCTTCCATTGCACCATGTaGTGCTTTGGGCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KIPHVFSSRIPKSFLDCCFHCTM*CFGPGR
Trigger: TCTCCCAGGCCCAAAGCAGCACATGGTGCAATGGAA...GCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAATACATGTGGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCCTTACTCACACACACACATAAGGCAGGCACAGAAGGGCAGTGTTTACAGCTGGGTCCATGTACATTGTaGTCTTATGAAACAGAAACA +
Preference number: 4 (lower is better)
Translates to: SLLTHTHKAGTEGQCLQLGPCTL*SYETET
Trigger: TGTTTCTGTTTCATAAGAGCACAATGTACATGGACC...CAGCTGTAAACACTGCCCTTCTGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTCTGCCTATTCCTTCATaGCTCTCTGTAAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: PEFSSAHRMAESIYLHSILPIPS*LSVRNQ
Trigger: CTGATTTCTTACAGAGAGGCATGAAGGAATAGGCAG...AATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTCTCACTCTCAGGTACCTCTCAGATCTGCCTaGATTTGGGAAAGACAGGCT +
Preference number: 4 (lower is better)
Translates to: SSFTFFQLFFLHISHSQVPLRSA*IWERQA
Trigger: AGCCTGTCTTTCCCAAATGCAGGCAGATCTGAGAGG...TACCTGAGAGTGAGAGATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCCTTACTCACACACACACATAAGGCAGGCACAGAAGGGCAGTGTTTACAGCTGCCAGTAAGTAATTGTTaGCTAAACGATAACAGCAGT +
Preference number: 4 (lower is better)
Translates to: SLLTHTHKAGTEGQCLQLPVSNC*LNDNSS
Trigger: ACTGCTGTTATCGTTTAGCCAACAATTACTTACTGG...CAGCTGTAAACACTGCCCTTCTGTGCCTGCCTTATGTGTGTGTGTGAGTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTTTCGTTGAAGTACACTaGAAATCTAATTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: SAMLSLSKVTCEDSKPILFVEVH*KSNSGT
Trigger: GGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAA...AAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATAATTCCAATGACACTTaGGACCACAGCTCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNNSNDT*DHSSPR
Trigger: CCTAGGGGAGCTGTGGTCCCAAGTGTCATTGGAATT...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp AGCGGGAGTGAAATTCAGGTCACTTCTGAGCAAAGCTCATCACAGATATTTTGTAGATCTGCCTGCATTTaGGAAAGACAGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SGSEIQVTSEQSSSQIFCRSACI*ERQASQ
Trigger: CTGAGAAGCCTGTCTTTCCCAAATGCAGGCAGATCT...ACAAAATATCTGTGATGAGCTTTGCTCAGAAGTGACCTGAATTTCACTCCCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAATAGATATTTTACCATaGACACCCATTGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLIDILP*TPIAMD
Trigger: GTCCATGGCAATGGGTGTCCATGGTAAAATATCTAT...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CAGATGTCCTATTTCGAAGTGCTAATGCAAAATGCTAACCCAGGAGGGGCAGTGAAGGGCAACAGTTTTTaGCAACCCAATTCACAGTTT +
Preference number: 4 (lower is better)
Translates to: QMSYFEVLMQNANPGGAVKGNSF*QPNSQF
Trigger: AAACTGTGAATTGGGTTGCCAAAAACTGTTGCCCTT...CACTGCCCCTCCTGGGTTAGCATTTTGCATTAGCACTTCGAAATAGGACATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 72 bp CCAATGGAGCAAGCTAGTGAAGCTTCCTCATTTCACTaGCAGAAGTCATTCTTGCGGCTTACTGCATTAAAG +
Preference number: 4 (lower is better)
Translates to: PMEQASEASSFH*QKSFLRLTALK
Trigger: CTTTAATGCAGTAAGCCGCAAGAATGACTTCTGCAAGTGAAATGAGGAAGCTTCACTAGCTTGCTCCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGAATTCAGGTCACTTCTaGGCAAAGCTCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKNSGHF*AKLITD
Trigger: ATCTGTGATGAGCTTTGCTCAGAAGTGACCTGAATT...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp ATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAATACAACACAAAGTGGGTACTaGAGCACAGATGGAAATCAC +
Preference number: 4 (lower is better)
Translates to: MLSLSKVTCEDSKPILNTTQSGY*STDGNH
Trigger: GTGATTTCCATCTGTGCTTCAGTACCCACTTTGTGT...TGTATTAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TTAATACATTCAGAGTTCTCTACATTCGAGTCAGCGAATGTTAATTCTCCAACAACACCTGAGTGCAGGTaGATCCACAGTGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: LIHSEFSTFESANVNSPTTPECR*IHSGDR
Trigger: CCTGTCACCACTGTGGATTCACCTGCACTCAGGTGT...TGTTGGAGAATTAACATTCGCTGACTCGAATGTAGAGAACTCTGAATGTATTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TTAATACATTCAGAGTTCTCTACATTCGAGTCAGCGAATGTTAATTCTCCAACAACAGGAGTGGACACCTaGGTGCAGGTGAATCCACAG +
Preference number: 4 (lower is better)
Translates to: LIHSEFSTFESANVNSPTTGVDT*VQVNPQ
Trigger: CTGTGGATTCACCTGCACTCAGGTGTCCACTCCTGT...TGTTGGAGAATTAACATTCGCTGACTCGAATGTAGAGAACTCTGAATGTATTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp ATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGCTAAACTGGGAGAAGTaGCTGGGTCTTTATGAAAAA +
Preference number: 4 (lower is better)
Translates to: IQNGKGYQDNSIETPLKRLNWEK*LGLYEK
Trigger: TTTTTCATAAAGACCCAGTCACTTCTCCCAGTTTAG...CCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTATGGGGTTTCTAACATaGAATGCTCATGGGTACTAT +
Preference number: 4 (lower is better)
Translates to: PEFSSAHRMAESIYLHSIMGFLT*NAHGYY
Trigger: ATAGTACCCATGAGCATTTCATGTTAGAAACCCCAT...AATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp ATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGGCCTCTGCTGCTACTaGTTGTTTTTAATTCAAAAC +
Preference number: 4 (lower is better)
Translates to: IQNGKGYQDNSIETPLKRGLCCY*LFLIQN
Trigger: GTTTTGAATTAAAAACAAGCAGTAGCAGCAGAGGCC...CCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp ATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAATACAGCAAAGGGCAGTATATaGTCACCCCAATGGATGAAA +
Preference number: 4 (lower is better)
Translates to: MLSLSKVTCEDSKPILNTAKGSI*SPQWMK
Trigger: TTTCATCCATTGGGGTGAGCATATACTGCCCTTTGC...TGTATTAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCACTTCCTCATTTCACTTaGAGAAGTCATTCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSLPHFT*RSHSCG
Trigger: GCCGCAAGAATGACTTCTGCAAGTGAAATGAGGAAG...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp GATCACGGTTTTGTAATGTTATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCGCACGAGAAGGGATGTaGACACATTCAGAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: DHGFVMLSRHDFGFQSWPAREGM*THSEKG
Trigger: TCCTTTTTCTGAATGTGTGCACATCCCTTCTCGTGC...GGGCCAGCTCTGAAATCCAAAATCATGCCTTGATAACATTACAAAACCGTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTTTTATACCCCAAGTTAAGTCCTaGCTATTCCTTCATGCCTCT +
Preference number: 4 (lower is better)
Translates to: FSSAHRMAESIYLHSIFIPQVKS*LFLHAS
Trigger: AGAGGCATGAAGGAATAGGCAGGACTTAACTTGGGG...TATAAAAATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp GATCACGGTTTTGTAATGTTATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAAGGACACCCAAGTTTaGTTTGTGATTTACCTGCCG +
Preference number: 4 (lower is better)
Translates to: DHGFVMLSRHDFGFQSWPKDTQV*FVIYLP
Trigger: CGGCAGGTAAATCACAAAGCAAACTTGGGTGTCCTT...GGGCCAGCTCTGAAATCCAAAATCATGCCTTGATAACATTACAAAACCGTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCGTTGTCTTTTATATTTaGCCAGTGAGCAGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: FSAMLSLSKVTCEDSKPIVVFYI*PVSRSY
Trigger: ATAGCTTCTGCTCACTGGGCAAATATAAAAGACAAC...GATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp AAGTGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGTTGTCTTTTATATTTaGCCAGTGAGCAGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: KCRLHFFSAMLSLSKVTCVVFYI*PVSRSY
Trigger: ATAGCTTCTGCTCACTGGGCAAATATAAAAGACAAC...ACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGGTCACTTCTGAGCACTCTAAATTCAAAATaGCAAAGGCTACCAAGACAA +
Preference number: 4 (lower is better)
Translates to: QLHRNPTEAGVKFRSLLSTLNSK*QRLPRQ
Trigger: TTGTCTTGGTAGCCTTTGCCATTTTGAATTTAGAGT...GCTCAGAAGTGACCTGAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR CCA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGGAAAAGAACACAAAGTaGGTACTGAAGCACAGATGG +
Preference number: 4 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKEKNTK*VLKHRW
Trigger: CCATCTGTGCTTCAGTACCCACTTTGTGTTCTTTTC...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp AGCGGGAGTGAAATTCAGGTCACTTCTGAGCAAAGCTCATCACAGATATTTTGTCTTACTGCATTAAAGTaGAGGTTACGAAACCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGSEIQVTSEQSSSQIFCLTALK*RLRNLG
Trigger: GCCCAGGTTTCGTAACCTCCACTTTAATGCAGTAAG...ACAAAATATCTGTGATGAGCTTTGCTCAGAAGTGACCTGAATTTCACTCCCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTATCTGCTAATGCTGTTTaGGATTTTGCTATGGAGATT +
Preference number: 4 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLSANAV*DFAMEI
Trigger: AATCTCCATAGCAAAATCCCAAACAGCATTAGCAGA...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp AATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGACAGGCCAAAAGTACTaGCACTCATCTTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: NSKWQRLPRQLHRNPTEATGQKY*HSSFTF
Trigger: GAAAGTGAAAGATGAGTGCCAGTACTTTTGGCCTGT...CGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTTCACTTTCTCTCTACTaGATAACAGGCCAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: PEFSSAHRMAESIYLHSISLSLY*ITGQKY
Trigger: GTACTTTTGGCCTGTTATCCAGTAGAGAGAAAGTGA...AATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTAGTTGGTCTCCTTGGCTaGGGGGCACTTTTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: LSILIIKTFPVNQANPRLVGLLG*GALLKW
Trigger: CCACTTTAAAAGTGCCCCCCAGCCAAGGAGACCAAC...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp GACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTTATTTTTATGTGGCCTaGCATCTACTTTTAATCGCT +
Preference number: 4 (lower is better)
Translates to: DCISSLPCFPSVRSPVRTYFYVA*HLLLIA
Trigger: AGCGATTAAAAGTAGATGCCAGGCCACATAAAAATA...AGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 72 bp AGTGAAGCTTCCTCATTTCACTTGCAGAAGTCATTCTaGCGGCTTACTGCATTAAAGTGGAGGTTACGAAAC +
Preference number: 4 (lower is better)
Translates to: SEASSFHLQKSF*RLTALKWRLRN
Trigger: GTTTCGTAACCTCCACTTTAATGCAGTAAGCCGCAAGAATGACTTCTGCAAGTGAAATGAGGAAGCTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 72 bp ACTTTTAAAGTGGCAAAGCCATGCCAACACAAGGCATaGCCTCTCAACATACAGTCAGTTCCTTTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TFKVAKPCQHKA*PLNIQSVPLRK
Trigger: TTTCCTCAAAGGAACTGACTGTATGTTGAGAGGCAATGCCTTGTGTTGGCATGGCTTTGCCACTTTAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTATCAGAGCTGGCCCAGTaGACAACAAGCAATCAAGCA +
Preference number: 4 (lower is better)
Translates to: LSILIIKTFPVNQANPRLSELAQ*TTSNQA
Trigger: TGCTTGATTGCTTGTTGTTCACTGGGCCAGCTCTGA...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TTAATACATTCAGAGTTCTCTACATTCGAGTCAGCGAATGTTAATTCTCCAACATACAGTCAGTTCCTTTaGGGAAAGCAGGCCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LIHSEFSTFESANVNSPTYSQFL*GKQAPS
Trigger: ACTGGGGGCCTGCTTTCCTCAAAGGAACTGACTGTA...TGTTGGAGAATTAACATTCGCTGACTCGAATGTAGAGAACTCTGAATGTATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCAATTTCTTCTCTGCCATaGTTTCCCTCAGTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSISSLP*FPSVRS
Trigger: TGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAAT...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCGCACGAGAAGGGATGTaGACACATTCAGAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHIAREGM*THSEKG
Trigger: TCCTTTTTCTGAATGTGTGCACATCCCTTCTCGTGC...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp TTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTTTTATAACTCTTATCTTTATCTaGCTAGGTGTCAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: FSSAHRMAESIYLHSIFITLIFI*LGVRRG
Trigger: GCCCCTTCTGACACCTAGGCAGATAAAGATAAGAGT...TATAAAAATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCACTCTTATCTTTATCTaGCTAGGTGTCAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHITLIFI*LGVRRG
Trigger: GCCCCTTCTGACACCTAGGCAGATAAAGATAAGAGT...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCACTCTAAATTCAAAATaGCAAAGGCTACCAAGACAA +
Preference number: 4 (lower is better)
Translates to: FSAMLSLSKVTCEDSKPITLNSK*QRLPRQ
Trigger: TTGTCTTGGTAGCCTTTGCCATTTTGAATTTAGAGT...GATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR CCA 90 bp AAGTGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTACTCTAAATTCAAAATaGCAAAGGCTACCAAGACAA +
Preference number: 4 (lower is better)
Translates to: KCRLHFFSAMLSLSKVTCTLNSK*QRLPRQ
Trigger: TTGTCTTGGTAGCCTTTGCCATTTTGAATTTAGAGT...ACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS-3UTR CCA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTTACACCGACATGCCTaGAAGATATACAAGACTCCC +
Preference number: 4 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHILHRHA*KIYKTP
Trigger: GGGAGTCTTGTATATCTTCCAGGCATGTCGGTGTAA...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTTTGGATTTCAGAGCTaGCCCAGTGAACAACAAGCA +
Preference number: 4 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHIFGFQS*PSEQQA
Trigger: TGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAA...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 72 bp ACACTTGGGACCACAGCTCCCCTAGGTCCATGTACATaGTGCTCTTATGAAACAGAAACAATATTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: TLGTTAPLGPCT*CSYETETIFRN
Trigger: ATTTCTGAATATTGTTTCTGTTTCATAAGAGCACAATGTACATGGACCTAGGGGAGCTGTGGTCCCAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GATCACGGTTTTGTAATGTTATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCGGAATTAGCATGTTTTaGAACAGTCGAACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: DHGFVMLSRHDFGFQSWPGISMF*NSRTSK
Trigger: CTTGCTTGTTCGACTGTTTCAAAACATGCTAATTCC...GGGCCAGCTCTGAAATCCAAAATCATGCCTTGATAACATTACAAAACCGTGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp AAGATCCCACATGTATTTTCTTCTCGAATCCCTAAAAGTTTCCTTGACTGTTGCGTTTCCTACCCCTGGTaGAAAACAAAGCCCAGAATT +
Preference number: 4 (lower is better)
Translates to: KIPHVFSSRIPKSFLDCCVSYPW*KTKPRI
Trigger: AATTCTGGGCTTTGTTTTGCACCAGGGGTAGGAAAC...GCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAATACATGTGGGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATAGTTTCCTTGACTGTTaGTCCTTACTCACACACACA +
Preference number: 4 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNSFLDC*SLLTHT
Trigger: TGTGTGTGTGAGTAAGGAGCAACAGTCAAGGAAACT...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp AAGATCCCACATGTATTTTCTTCTCGAATCCCTAAAAGTTTCCTTGACTGTTGCACACTTAAAGGCTTCTaGGCCTCTCTTACCCTCTTA +
Preference number: 4 (lower is better)
Translates to: KIPHVFSSRIPKSFLDCCTLKGF*ASLTLL
Trigger: TAAGAGGGTAAGAGAGGCCCAGAAGCCTTTAAGTGT...GCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAATACATGTGGGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TTAATACATTCAGAGTTCTCTACATTCGAGTCAGCGAATGTTAATTCTCCAACAACAGGCTTCTCAGGCTaGCAGCTGGTTTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: LIHSEFSTFESANVNSPTTGFSG*QLVLLK
Trigger: CTTCAGTAAAACCAGCTGCCAGCCTGAGAAGCCTGT...TGTTGGAGAATTAACATTCGCTGACTCGAATGTAGAGAACTCTGAATGTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTACTGGGTGATCAGCAATaGCATCTCTTTGGAGCTAAC +
Preference number: 4 (lower is better)
Translates to: LSILIIKTFPVNQANPRLLGDQQ*HLFGAN
Trigger: GTTAGCTCCAAAGAGATGCCATTGCTGATCACCCAG...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp ATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGTATTTTTATGTGGCCTaGCATCTACTTTTAATCGCT +
Preference number: 4 (lower is better)
Translates to: IQNGKGYQDNSIETPLKRYFYVA*HLLLIA
Trigger: AGCGATTAAAAGTAGATGCCAGGCCACATAAAAATA...CCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTCTCACTCTCAGGTAGGAATTAGCATGTTTTaGAACAGTCGAACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SSFTFFQLFFLHISHSQVGISMF*NSRTSK
Trigger: CTTGCTTGTTCGACTGTTTCAAAACATGCTAATTCC...TACCTGAGAGTGAGAGATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTTTTATAAAATATAAATTCCAATaGCACTTGGGACCACAGCTC +
Preference number: 4 (lower is better)
Translates to: FSSAHRMAESIYLHSIFIKYKFQ*HLGPQL
Trigger: GAGCTGTGGTCCCAAGTGTCATTGGAATTTATATTT...TATAAAAATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATCTAAACTGGGAGAAGTaGCTGGGTCTTTATGAAAAA +
Preference number: 4 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNLNWEK*LGLYEK
Trigger: TTTTTCATAAAGACCCAGTCACTTCTCCCAGTTTAG...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR GCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTAAAGGACACCCAAGTTTaGTTTGTGATTTACCTGCCG +
Preference number: 4 (lower is better)
Translates to: LSILIIKTFPVNQANPRLKDTQV*FVIYLP
Trigger: CGGCAGGTAAATCACAAAGCAAACTTGGGTGTCCTT...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TTAATACATTCAGAGTTCTCTACATTCGAGTCAGCGAATGTTAATTCTCCAACAAGATCTGCCTGCATTTaGGAAAGACAGGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LIHSEFSTFESANVNSPTRSACI*ERQASQ
Trigger: CTGAGAAGCCTGTCTTTCCCAAATGCAGGCAGATCT...TGTTGGAGAATTAACATTCGCTGACTCGAATGTAGAGAACTCTGAATGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp TCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCTCTCACTCTCAGGTAACTGGGAGAAGTGACTaGGTCTTTATGAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: SSFTFFQLFFLHISHSQVTGRSD*VFMKKD
Trigger: ATCCTTTTTCATAAAGACCCAGTCACTTCTCCCAGT...TACCTGAGAGTGAGAGATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATATAGATATTTTACCATaGACACCCATTGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNIDILP*TPIAMD
Trigger: GTCCATGGCAATGGGTGTCCATGGTAAAATATCTAT...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp TTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTTTTATATATTATTTTACCCGATaGCTTAAAACTGGAGTACGC +
Preference number: 4 (lower is better)
Translates to: FSSAHRMAESIYLHSIFIYYFTR*LKTGVR
Trigger: GCGTACTCCAGTTTTAAGTCATCGGGTAAAATAATA...TATAAAAATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCCCAGTAAGTAATTGTTaGCTAAACGATAACAGCAGT +
Preference number: 4 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHIPVSNC*LNDNSS
Trigger: ACTGCTGTTATCGTTTAGCCAACAATTACTTACTGG...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR TCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTAATGGGGTTTCTAACATaGAATGCTCATGGGTACTAT +
Preference number: 4 (lower is better)
Translates to: LSILIIKTFPVNQANPRLMGFLT*NAHGYY
Trigger: ATAGTACCCATGAGCATTTCATGTTAGAAACCCCAT...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTAACTGGGAGAAGTGACTaGGTCTTTATGAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: LSILIIKTFPVNQANPRLTGRSD*VFMKKD
Trigger: ATCCTTTTTCATAAAGACCCAGTCACTTCTCCCAGT...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
3UTR CAA 72 bp CTTAGTCCAAAGCTAAGTGATTATCCTTTCCTGCCCTaGTATTTGCACTTGTGCAGTTTAATGACTAGATAT +
Preference number: 4 (lower is better)
Translates to: LSPKLSDYPFLP*YLHLCSLMTRY
Trigger: ATATCTAGTCATTAAACTGCACAAGTGCAAATACAAGGGCAGGAAAGGATAATCACTTAGCTTTGGACTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CCA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTATCTGCTAATGCTGTTTaGGATTTTGCTATGGAGATT +
Preference number: 4 (lower is better)
Translates to: LSILIIKTFPVNQANPRLSANAV*DFAMEI
Trigger: AATCTCCATAGCAAAATCCCAAACAGCATTAGCAGA...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS CCA 90 bp AAGGGCGTGTTGGAGCACCATTTCTCCGCAACGTCGGCCAGCTGCTaGAAATCCATCGCGGCCCCGCGCCCGCCTCCCGCCGCCGCCCGC +
Preference number: 5 (lower is better)
Translates to: KGVLEHHFSATSASC*KSIAAPRPPPAAAR
Trigger: GCGGGCGGCGGCGGGAGGCGGGCGCGGGGCCGCGATGGATTTCCAGCAGCTGGCCGACGTTGCGGAGAAATGGTGCTCCAACACGCCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS TCA 90 bp GGTCGGCGTAGAAATCCATCCTGCGTTCGGTCTCCTCGGTGGCGATaGGCTCGAAGGGCGTGTTGGAGCACCATTTCTCCGCAACGTCGG +
Preference number: 5 (lower is better)
Translates to: GRRRNPSCVRSPRWR*ARRACWSTISPQRR
Trigger: CCGACGTTGCGGAGAAATGGTGCTCCAACACGCCCTTCGAGCTCATCGCCACCGAGGAGACCGAACGCAGGATGGATTTCTACGCCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS CCA 90 bp CCAGATTTACTGCTGGCTGACCCCCATCTGGGGGTGGTCCGCCTCTaGCTCCTCTTCTTCCACGTCAGCACTGTACTCTTCAAACGCATC +
Preference number: 5 (lower is better)
Translates to: PDLLLADPHLGVVRL*LLFFHVSTVLFKRI
Trigger: GATGCGTTTGAAGAGTACAGTGCTGACGTGGAAGAAGAGGAGCCAGAGGCGGACCACCCCCAGATGGGGGTCAGCCAGCAGTAAATCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS CCA 90 bp CCTGGCCCACTTACTGTCTTTGGAGTCATTTCTTTGGGTATGGCCTaGGCGGTCCCAGCAGGAAGGCTGTGTGGGCTTCTCCCCAGTGAA +
Preference number: 5 (lower is better)
Translates to: PGPLTVFGVISLGMA*AVPAGRLCGLLPSE
Trigger: TTCACTGGGGAGAAGCCCACACAGCCTTCCTGCTGGGACCGCCCAGGCCATACCCAAAGAAATGACTCCAAAGACAGTAAGTGGGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CCA 90 bp GTCTTCCTGGCCCACTTACTGTCTTTGGAGTCATTTCTTTGGGTATaGCCTGGGCGGTCCCAGCAGGAAGGCTGTGTGGGCTTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: VFLAHLLSLESFLWV*PGRSQQEGCVGFSP
Trigger: TGGGGAGAAGCCCACACAGCCTTCCTGCTGGGACCGCCCAGGCCATACCCAAAGAAATGACTCCAAAGACAGTAAGTGGGCCAGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CCA 90 bp CCTTTTGTCTTCCTGGCCCACTTACTGTCTTTGGAGTCATTTCTTTaGGTATGGCCTGGGCGGTCCCAGCAGGAAGGCTGTGTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: PFVFLAHLLSLESFL*VWPGRSQQEGCVGF
Trigger: GAAGCCCACACAGCCTTCCTGCTGGGACCGCCCAGGCCATACCCAAAGAAATGACTCCAAAGACAGTAAGTGGGCCAGGAAGACAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS-3UTR CAA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATATACAGTCAGTTCCTTaGAGGAAAGCAGGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNIQSVP*RKAGPQ
Trigger: CTGGGGGCCTGCTTTCCTCAAAGGAACTGACTGTAT...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGTTTCCACTGTTCACCTaGTGCAGGCTAAGGGCGGTT +
Preference number: 5 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQFPLFT*CRLRAV
Trigger: AACCGCCCTTAGCCTGCACAAGGTGAACAGTGGAAA...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324489.5
CDS-3UTR CAA 90 bp TTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCTCACTGACTGCAGCTTaGCACCATGCACAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: FSAMLSLSKVTCEDSKPISLTAA*HHAQPC
Trigger: GCAGGGCTGTGCATGGTGCAAAGCTGCAGTCAGTGA...GATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATCCTAAAGGCAGCACCTaGGCAAGATCCCACATGTAT +
Preference number: 5 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNPKGST*ARSHMY
Trigger: ATACATGTGGGATCTTGCCAAGGTGCTGCCTTTAGG...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATAGCTCACAATCACCTTaGCTCATGAATGGAGCCAAT +
Preference number: 5 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNSSQSP*LMNGAN
Trigger: ATTGGCTCCATTCATGAGCAAAGGTGATTGTGAGCT...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGCAAGGACACCCAAGTTaGCTTTGTGATTTACCTGCC +
Preference number: 5 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQQGHPS*LCDLPA
Trigger: GGCAGGTAAATCACAAAGCAAACTTGGGTGTCCTTG...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp GGTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCAGCAATGGCATCTCTTaGGAGCTAACACCCACTGCA +
Preference number: 5 (lower is better)
Translates to: GAKQSPEFSSAHRMAESISNGIS*ELTPTA
Trigger: TGCAGTGGGTGTTAGCTCCAAAGAGATGCCATTGCT...GATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp GAGAGGTTTTCGTTGAAGTACACTGGAAATCTAATTCTGGCACCAGGACACAAGAGCTCGAAGGGCGTGTaGGAGCACCATTTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: ERFSLKYTGNLILAPGHKSSKGV*EHHFSA
Trigger: TGCGGAGAAATGGTGCTCCAACACGCCCTTCGAGCT...CTTGTGTCCTGGTGCCAGAATTAGATTTCCAGTGTACTTCAACGAAAACCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324453.13
CDS-3UTR CAA 90 bp AATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGAGCTCGAAGGGCGTGTaGGAGCACCATTTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: NSKWQRLPRQLHRNPTEASSKGV*EHHFSA
Trigger: TGCGGAGAAATGGTGCTCCAACACGCCCTTCGAGCT...CGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS-3UTR CAA 90 bp GACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTGCTTCCTCATTTCACTaGCAGAAGTCATTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: DCISSLPCFPSVRSPVRTASSFH*QKSFLR
Trigger: CCGCAAGAATGACTTCTGCAAGTGAAATGAGGAAGC...AGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp GATCACGGTTTTGTAATGTTATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCTCACTGACTGCAGCTTaGCACCATGCACAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: DHGFVMLSRHDFGFQSWPSLTAA*HHAQPC
Trigger: GCAGGGCTGTGCATGGTGCAAAGCTGCAGTCAGTGA...GGGCCAGCTCTGAAATCCAAAATCATGCCTTGATAACATTACAAAACCGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTACCTAAAGGCAGCACCTaGGCAAGATCCCACATGTAT +
Preference number: 5 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLPKGST*ARSHMY
Trigger: ATACATGTGGGATCTTGCCAAGGTGCTGCCTTTAGG...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATCGAGCCCTCAGGGGCTaGGGCACTCACAGATCAACA +
Preference number: 5 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNRALRG*GTHRST
Trigger: TGTTGATCTGTGAGTGCCCAAGCCCCTGAGGGCTCG...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATGCACCATGTGCTGCTTaGGGCCTGGGAGACAGGAGT +
Preference number: 5 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNAPCAA*GLGDRS
Trigger: ACTCCTGTCTCCCAGGCCCAAAGCAGCACATGGTGC...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp TCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAGCAATGGCATCTCTTaGGAGCTAACACCCACTGCA +
Preference number: 5 (lower is better)
Translates to: SAMLSLSKVTCEDSKPILSNGIS*ELTPTA
Trigger: TGCAGTGGGTGTTAGCTCCAAAGAGATGCCATTGCT...AAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp TGGAGTACGCTGTTTTACCACGAGCAGCCGAACTCCTCACAGCACCAATCAATTAGCTCACAATCACCTTaGCTCATGAATGGAGCCAAT +
Preference number: 5 (lower is better)
Translates to: WSTLFYHEQPNSSQHQSISSQSP*LMNGAN
Trigger: ATTGGCTCCATTCATGAGCAAAGGTGATTGTGAGCT...AATTGATTGGTGCTGTGAGGAGTTCGGCTGCTCGTGGTAAAACAGCGTACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp AAGATCCCACATGTATTTTCTTCTCGAATCCCTAAAAGTTTCCTTGACTGTTGCCGAGCCCTCAGGGGCTaGGGCACTCACAGATCAACA +
Preference number: 5 (lower is better)
Translates to: KIPHVFSSRIPKSFLDCCRALRG*GTHRST
Trigger: TGTTGATCTGTGAGTGCCCAAGCCCCTGAGGGCTCG...GCAACAGTCAAGGAAACTTTTAGGGATTCGAGAAGAAAATACATGTGGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp GGTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCAAGGCATGATTTaGGATTTCAGAGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: GAKQSPEFSSAHRMAESIYQGMI*DFRAGP
Trigger: TGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA...GATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTCTTCACTCTGATTCCTaGACGTCTGCTCGATATGGT +
Preference number: 5 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSLHSDS*TSARYG
Trigger: ACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAG...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTATGCCAACACAAGGCATaGCCTCTCAACATACAGTCA +
Preference number: 5 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLCQHKA*PLNIQS
Trigger: TGACTGTATGTTGAGAGGCAATGCCTTGTGTTGGCA...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp TCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATGTCTCTAGGATTCACTCAAGAAGGGCAACAGTTTTaGGCAACCCAATTCACAGTT +
Preference number: 5 (lower is better)
Translates to: SGCGNQAAIRTMSLGFTQEGQQF*ATQFTV
Trigger: AACTGTGAATTGGGTTGCCAAAAACTGTTGCCCTTC...TTGAGTGAATCCTAGAGACATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp AAGTGCAGACTGCATTTCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTTATCCTTTCCTGCCCTaGTATTTGCACTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: KCRLHFFSAMLSLSKVTCYPFLP*YLHLCS
Trigger: ACTGCACAAGTGCAAATACAAGGGCAGGAAAGGATA...ACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGAAATGCAGTCTGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCTATCCTTTCCTGCCCTaGTATTTGCACTTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: QRLPRQLHRNPTEAGVKFYPFLP*YLHLCS
Trigger: ACTGCACAAGTGCAAATACAAGGGCAGGAAAGGATA...GAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CGTCTGCTCGATATGGTGATCAGGCTGCGGAAACCAGGCGGCCATAAGAACAATAAGTTTAAGCGGCACTaGAATTCTGGATGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: RLLDMVIRLRKPGGHKNNKFKRH*NSGCFH
Trigger: ATGAAAACATCCAGAATTCAAGTGCCGCTTAAACTT...ATTGTTCTTATGGCCGCCTGGTTTCCGCAGCCTGATCACCATATCGAGCAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp TGGAGTACGCTGTTTTACCACGAGCAGCCGAACTCCTCACAGCACCAATCAATTTTGCAGAAGTCATTCTaGCGGCTTACTGCATTAAAG +
Preference number: 5 (lower is better)
Translates to: WSTLFYHEQPNSSQHQSILQKSF*RLTALK
Trigger: CTTTAATGCAGTAAGCCGCAAGAATGACTTCTGCAA...AATTGATTGGTGCTGTGAGGAGTTCGGCTGCTCGTGGTAAAACAGCGTACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGGTCACTTCTGAGCTCCCTAAAAGTTTCCTaGACTGTTGCTCCTTACTCA +
Preference number: 5 (lower is better)
Translates to: QLHRNPTEAGVKFRSLLSSLKVS*TVAPYS
Trigger: TGAGTAAGGAGCAACAGTCAAGGAAACTTTTAGGGA...GCTCAGAAGTGACCTGAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp ATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAATACAATACAGTCAGTTCCTTaGAGGAAAGCAGGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: MLSLSKVTCEDSKPILNTIQSVP*RKAGPQ
Trigger: CTGGGGGCCTGCTTTCCTCAAAGGAACTGACTGTAT...TGTATTAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGGAGTGAAATTCAGATCTGCCCTAGCATaGAAGATTTACTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: QRLPRQLHRNPTEAGVKFRSALA*KIYFLL
Trigger: GAGGAGGAAGTAAATCTTCAATGCTAGGGCAGATCT...GAATTTCACTCCCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS CCA 90 bp GTTGGATACACATATTCATGGCAAGAGAACAGCCTTTTGTCTTCCTaGCCCACTTACTGTCTTTGGAGTCATTTCTTTGGGTATGGCCTG +
Preference number: 5 (lower is better)
Translates to: VGYTYSWQENSLLSS*PTYCLWSHFFGYGL
Trigger: CAGGCCATACCCAAAGAAATGACTCCAAAGACAGTAAGTGGGCCAGGAAGACAAAAGGCTGTTCTCTTGCCATGAATATGTGTATCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS-3UTR CAA 90 bp TTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCTTCCTGCCCTTGTATTaGCACTTGTGCAGTTTAATG +
Preference number: 5 (lower is better)
Translates to: FSAMLSLSKVTCEDSKPIFLPLY*HLCSLM
Trigger: CATTAAACTGCACAAGTGCAAATACAAGGGCAGGAA...GATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CCTGGCTCCGTACTTCACTCTGATTCCTTGACGTCTGCTCGATATGGTGATCAGATGCTGTTTGGGATTTaGCTATGGAGATTAAGTAAC +
Preference number: 5 (lower is better)
Translates to: PGSVLHSDSLTSARYGDQMLFGI*LWRLSN
Trigger: GTTACTTAATCTCCATAGCAAAATCCCAAACAGCAT...CTGATCACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAGTACGGAGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp TCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCCTAAAAGTTTCCTaGACTGTTGCTCCTTACTCA +
Preference number: 5 (lower is better)
Translates to: SSLPCFPSVRSPVRTQNLSLKVS*TVAPYS
Trigger: TGAGTAAGGAGCAACAGTCAAGGAAACTTTTAGGGA...TAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp ATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGGTATCAAGGCATGATTTaGGATTTCAGAGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: IQNGKGYQDNSIETPLKRYQGMI*DFRAGP
Trigger: TGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA...CCGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp TTAATACATTCAGAGTTCTCTACATTCGAGTCAGCGAATGTTAATTCTCCAACAGCACCATGTGCTGCTTaGGGCCTGGGAGACAGGAGT +
Preference number: 5 (lower is better)
Translates to: LIHSEFSTFESANVNSPTAPCAA*GLGDRS
Trigger: ACTCCTGTCTCCCAGGCCCAAAGCAGCACATGGTGC...TGTTGGAGAATTAACATTCGCTGACTCGAATGTAGAGAACTCTGAATGTATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp GATCACGGTTTTGTAATGTTATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCGCTTCCTCATTTCACTaGCAGAAGTCATTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: DHGFVMLSRHDFGFQSWPASSFH*QKSFLR
Trigger: CCGCAAGAATGACTTCTGCAAGTGAAATGAGGAAGC...GGGCCAGCTCTGAAATCCAAAATCATGCCTTGATAACATTACAAAACCGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp GTGCAAAACAAAGCCCAGAATTCTCATCAGCCCACAGAATGGCCGAGTCTATCTAAAGACTTCAGCTTCTaGTGTCATACCTGTTATCAC +
Preference number: 5 (lower is better)
Translates to: VQNKAQNSHQPTEWPSLSKDFSF*CHTCYH
Trigger: GTGATAACAGGTATGACACAAGAAGCTGAAGTCTTT...AGATAGACTCGGCCATTCTGTGGGCTGATGAGAATTCTGGGCTTTGTTTTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATCCTTAAAAGACTTCAGCTTCTaGTGTCATACCTGTTATCAC +
Preference number: 5 (lower is better)
Translates to: LPCFPSVRSPVRTQNLSLKDFSF*CHTCYH
Trigger: GTGATAACAGGTATGACACAAGAAGCTGAAGTCTTT...TAAGGATAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp TCTTCTCTGCCATGCTTTCCCTCAGTAAGGTCACCTGTGAGGACTCAAAACCTATGTTGTCTTTTATATTaGCCCAGTGAGCAGAAGCTA +
Preference number: 5 (lower is better)
Translates to: SSLPCFPSVRSPVRTQNLCCLLY*PSEQKL
Trigger: TAGCTTCTGCTCACTGGGCAAATATAAAAGACAACA...TAGGTTTTGAGTCCTCACAGGTGACCTTACTGAGGGAAAGCATGGCAGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATCTTCACTCTGATTCCTaGACGTCTGCTCGATATGGT +
Preference number: 5 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNLHSDS*TSARYG
Trigger: ACCATATCGAGCAGACGTCAAGGAATCAGAGTGAAG...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CAAAAGTACTGGCACTCATCTTTCACTTTCTTCCAGCTATTCTTCCTACACATCAGATCTGCCCTAGCATaGAAGATTTACTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: QKYWHSSFTFFQLFFLHIRSALA*KIYFLL
Trigger: GAGGAGGAAGTAAATCTTCAATGCTAGGGCAGATCT...GATGTGTAGGAAGAATAGCTGGAAGAAAGTGAAAGATGAGTGCCAGTACTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp TTCTCATCAGCCCACAGAATGGCCGAGTCTATCTATCTCCACTCAATTTTTATAGAAGGGCAACAGTTTTaGGCAACCCAATTCACAGTT +
Preference number: 5 (lower is better)
Translates to: FSSAHRMAESIYLHSIFIEGQQF*ATQFTV
Trigger: AACTGTGAATTGGGTTGCCAAAAACTGTTGCCCTTC...TATAAAAATTGAGTGGAGATAGATAGACTCGGCCATTCTGTGGGCTGATGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp AATTCAAAATGGCAAAGGCTACCAAGACAACTCCATAGAAACCCCACTGAAGCGATGCTGTTTGGGATTTaGCTATGGAGATTAAGTAAC +
Preference number: 5 (lower is better)
Translates to: NSKWQRLPRQLHRNPTEAMLFGI*LWRLSN
Trigger: GTTACTTAATCTCCATAGCAAAATCCCAAACAGCAT...CGCTTCAGTGGGGTTTCTATGGAGTTGTCTTGGTAGCCTTTGCCATTTTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp AGCGGGAGTGAAATTCAGGTCACTTCTGAGCAAAGCTCATCACAGATATTTTGTCTAGGTCCATGTACATaGTGCTCTTATGAAACAGAA +
Preference number: 5 (lower is better)
Translates to: SGSEIQVTSEQSSSQIFCLGPCT*CSYETE
Trigger: TTCTGTTTCATAAGAGCACAATGTACATGGACCTAG...ACAAAATATCTGTGATGAGCTTTGCTCAGAAGTGACCTGAATTTCACTCCCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTATGCCAACACAAGGCATaGCCTCTCAACATACAGTCA +
Preference number: 5 (lower is better)
Translates to: LSILIIKTFPVNQANPRLCQHKA*PLNIQS
Trigger: TGACTGTATGTTGAGAGGCAATGCCTTGTGTTGGCA...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp TATCAAGGCATGATTTTGGATTTCAGAGCTGGCCCAGTGAACAACAAGCAATCATGTTGTCTTTTATATTaGCCCAGTGAGCAGAAGCTA +
Preference number: 5 (lower is better)
Translates to: YQGMILDFRAGPVNNKQSCCLLY*PSEQKL
Trigger: TAGCTTCTGCTCACTGGGCAAATATAAAAGACAACA...TGATTGCTTGTTGTTCACTGGGCCAGCTCTGAAATCCAAAATCATGCCTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp GATTTACACTGTTTGAAGCATCTAACGAAGGGCAACAGTTTTTGGCAACCCAATCTAGGTCCATGTACATaGTGCTCTTATGAAACAGAA +
Preference number: 5 (lower is better)
Translates to: DLHCLKHLTKGNSFWQPNLGPCT*CSYETE
Trigger: TTCTGTTTCATAAGAGCACAATGTACATGGACCTAG...ATTGGGTTGCCAAAAACTGTTGCCCTTCGTTAGATGCTTCAAACAGTGTAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS-3UTR CAA 90 bp CTGAGTATCTTGATTATTAAAACGTTCCCTGTTAACCAAGCTAACCCACGATTATTGCAGAAGTCATTCTaGCGGCTTACTGCATTAAAG +
Preference number: 5 (lower is better)
Translates to: LSILIIKTFPVNQANPRLLQKSF*RLTALK
Trigger: CTTTAATGCAGTAAGCCGCAAGAATGACTTCTGCAA...TAATCGTGGGTTAGCTTGGTTAACAGGGAACGTTTTAATAATCAAGATACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000324489.5
CDS CCA 90 bp GAAAGGCCTGATACAAATAATATAATACTTCTTACTTCTGAACGATaGTTGGATACACATATTCATGGCAAGAGAACAGCCTTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: ERPDTNNIILLTSER*LDTHIHGKRTAFCL
Trigger: AAGACAAAAGGCTGTTCTCTTGCCATGAATATGTGTATCCAACCATCGTTCAGAAGTAAGAAGTATTATATTATTTGTATCAGGCCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS GCA 72 bp GTGTTGGAGCACCATTTCTCCGCAACGTCGGCCAGCTaGTGGAAATCCATCGCGGCCCCGCGCCCGCCTCCC +
Preference number: 6 (lower is better)
Translates to: VLEHHFSATSAS*WKSIAAPRPPP
Trigger: GGGAGGCGGGCGCGGGGCCGCGATGGATTTCCAGCAGCTGGCCGACGTTGCGGAGAAATGGTGCTCCAACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS CAA 72 bp TCGGTCTCCTCGGTGGCGATGAGCTCGAAGGGCGTGTaGGAGCACCATTTCTCCGCAACGTCGGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SVSSVAMSSKGV*EHHFSATSASC
Trigger: GCAGCTGGCCGACGTTGCGGAGAAATGGTGCTCCAACACGCCCTTCGAGCTCATCGCCACCGAGGAGACCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS CCA 72 bp CTGCTGGCTGACCCCCATCTGGGGGTGGTCCGCCTCTaGCTCCTCTTCTTCCACGTCAGCACTGTACTCTTC +
Preference number: 6 (lower is better)
Translates to: LLADPHLGVVRL*LLFFHVSTVLF
Trigger: GAAGAGTACAGTGCTGACGTGGAAGAAGAGGAGCCAGAGGCGGACCACCCCCAGATGGGGGTCAGCCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324453.13
ENST00000324489.5
ENST00000409688.1
CDS CAA 90 bp ATCCTGCGTTCGGTCTCCTCGGTGGCGATGAGCTCGAAGGGCGTGTaGGAGCACCATTTCTCCGCAACGTCGGCCAGCTGCTGGAAATCC +
Preference number: 6 (lower is better)
Translates to: ILRSVSSVAMSSKGV*EHHFSATSASCWKS
Trigger: GGATTTCCAGCAGCTGGCCGACGTTGCGGAGAAATGGTGCTCCAACACGCCCTTCGAGCTCATCGCCACCGAGGAGACCGAACGCAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS TCA 72 bp AGAAATCCATCCTGCGTTCGGTCTCCTCGGTGGCGATaGGCTCGAAGGGCGTGTTGGAGCACCATTTCTCCG +
Preference number: 6 (lower is better)
Translates to: RNPSCVRSPRWR*ARRACWSTISP
Trigger: CGGAGAAATGGTGCTCCAACACGCCCTTCGAGCTCATCGCCACCGAGGAGACCGAACGCAGGATGGATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324453.13
ENST00000409688.1
CDS CCA 72 bp GCCCACTTACTGTCTTTGGAGTCATTTCTTTGGGTATaGCCTGGGCGGTCCCAGCAGGAAGGCTGTGTGGGC +
Preference number: 6 (lower is better)
Translates to: AHLLSLESFLWV*PGRSQQEGCVG
Trigger: GCCCACACAGCCTTCCTGCTGGGACCGCCCAGGCCATACCCAAAGAAATGACTCCAAAGACAGTAAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CAA 72 bp CTTCCTGGCCCACTTACTGTCTTTGGAGTCATTTCTTaGGGTATGGCCTGGGCGGTCCCAGCAGGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: LPGPLTVFGVIS*GMAWAVPAGRL
Trigger: CAGCCTTCCTGCTGGGACCGCCCAGGCCATACCCAAAGAAATGACTCCAAAGACAGTAAGTGGGCCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CAA 90 bp GCCTTTTGTCTTCCTGGCCCACTTACTGTCTTTGGAGTCATTTCTTaGGGTATGGCCTGGGCGGTCCCAGCAGGAAGGCTGTGTGGGCTT +
Preference number: 6 (lower is better)
Translates to: AFCLPGPLTVFGVIS*GMAWAVPAGRLCGL
Trigger: AAGCCCACACAGCCTTCCTGCTGGGACCGCCCAGGCCATACCCAAAGAAATGACTCCAAAGACAGTAAGTGGGCCAGGAAGACAAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CCA 72 bp TTCCTGGCCCACTTACTGTCTTTGGAGTCATTTCTTTaGGTATGGCCTGGGCGGTCCCAGCAGGAAGGCTGT +
Preference number: 6 (lower is better)
Translates to: FLAHLLSLESFL*VWPGRSQQEGC
Trigger: ACAGCCTTCCTGCTGGGACCGCCCAGGCCATACCCAAAGAAATGACTCCAAAGACAGTAAGTGGGCCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CAA 90 bp GGCCTGGGACAGATTCAAGAGGTCCGGCTAGGAAAACTCCCGAGGTaGGCATCTTGTCCATTAGAGCCTCCAGAACTTGGAGAAAGTTCC +
Preference number: 6 (lower is better)
Translates to: GLGQIQEVRLGKLPR*ASCPLEPPELGESS
Trigger: GGAACTTTCTCCAAGTTCTGGAGGCTCTAATGGACAAGATGCCAACCTCGGGAGTTTTCCTAGCCGGACCTCTTGAATCTGTCCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CAA 72 bp GAACAGCCTTTTGTCTTCCTGGCCCACTTACTGTCTTaGGAGTCATTTCTTTGGGTATGGCCTGGGCGGTCC +
Preference number: 6 (lower is better)
Translates to: EQPFVFLAHLLS*ESFLWVWPGRS
Trigger: GGACCGCCCAGGCCATACCCAAAGAAATGACTCCAAAGACAGTAAGTGGGCCAGGAAGACAAAAGGCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CAA 72 bp AGAGGTCCGGCTAGGAAAACTCCCGAGGTTGGCATCTaGTCCATTAGAGCCTCCAGAACTTGGAGAAAGTTC +
Preference number: 6 (lower is better)
Translates to: RGPARKTPEVGI*SIRASRTWRKF
Trigger: GAACTTTCTCCAAGTTCTGGAGGCTCTAATGGACAAGATGCCAACCTCGGGAGTTTTCCTAGCCGGACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CAA 72 bp CAGATTCAAGAGGTCCGGCTAGGAAAACTCCCGAGGTaGGCATCTTGTCCATTAGAGCCTCCAGAACTTGGA +
Preference number: 6 (lower is better)
Translates to: QIQEVRLGKLPR*ASCPLEPPELG
Trigger: TCCAAGTTCTGGAGGCTCTAATGGACAAGATGCCAACCTCGGGAGTTTTCCTAGCCGGACCTCTTGAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CCA 72 bp GTTCACCTTGTGCAGGCTAAGGGCGGTTTTCAGACATaGGGAAGGAGAAACCAGAGCCTTTGCCTTCAAAAT +
Preference number: 6 (lower is better)
Translates to: VHLVQAKGGFQT*GRRNQSLCLQN
Trigger: ATTTTGAAGGCAAAGGCTCTGGTTTCTCCTTCCCCATGTCTGAAAACCGCCCTTAGCCTGCACAAGGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324489.5
CDS CAA 90 bp ACAGATTCAAGAGGTCCGGCTAGGAAAACTCCCGAGGTTGGCATCTaGTCCATTAGAGCCTCCAGAACTTGGAGAAAGTTCCATTCTACC +
Preference number: 6 (lower is better)
Translates to: TDSRGPARKTPEVGI*SIRASRTWRKFHST
Trigger: GGTAGAATGGAACTTTCTCCAAGTTCTGGAGGCTCTAATGGACAAGATGCCAACCTCGGGAGTTTTCCTAGCCGGACCTCTTGAATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CCA 72 bp ACATATTCATGGCAAGAGAACAGCCTTTTGTCTTCCTaGCCCACTTACTGTCTTTGGAGTCATTTCTTTGGG +
Preference number: 6 (lower is better)
Translates to: TYSWQENSLLSS*PTYCLWSHFFG
Trigger: CCCAAAGAAATGACTCCAAAGACAGTAAGTGGGCCAGGAAGACAAAAGGCTGTTCTCTTGCCATGAATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1
CDS CAA 90 bp AGGCCTGATACAAATAATATAATACTTCTTACTTCTGAACGATGGTaGGATACACATATTCATGGCAAGAGAACAGCCTTTTGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: RPDTNNIILLTSERW*DTHIHGKRTAFCLP
Trigger: AGGAAGACAAAAGGCTGTTCTCTTGCCATGAATATGTGTATCCAACCATCGTTCAGAAGTAAGAAGTATTATATTATTTGTATCAGGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434060.1