RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTTP (Homo sapiens)

Ensembl gene IDs: ENSG00000138823

Ensembl transcript IDs: ENST00000265517.10, ENST00000422897.6, ENST00000457717.6, ENST00000505094.6, ENST00000511045.6, ENST00000511610.6

Found 385 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CAA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCCTTAGTCATGCCACATaGTGTCCCTTTCGGGGAGAC +
Preference number: 3 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPLSHAT*CPFRGD
Trigger: GTCTCCCCGAAAGGGACACAATGTGGCATGACTAAG...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
3UTR-3UTR CAA 90 bp TTTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGATGACTTGCTTTGTTACAGGGAACTCAGGGCATaGATTCAGTTTGGAAACATT +
Preference number: 3 (lower is better)
Translates to: FVSFPEFIQSCFDDLLCYRELRA*IQFGNI
Trigger: AATGTTTCCAAACTGAATCAATGCCCTGAGTTCCCT...GTAACAAAGCAAGTCATCAAAGCATGATTGGATGAATTCAGGAAAGGAGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
3UTR-3UTR CAA 90 bp TGTCTGTGTTTAGTGGAAAATAAGGACCTGTCATTTGTTTTGGGTTTATCACCAAGTAAACTAAGAACGTaGTTGAAAGCGTCACATGAT +
Preference number: 3 (lower is better)
Translates to: CLCLVENKDLSFVLGLSPSKLRT*LKASHD
Trigger: ATCATGTGACGCTTTCAACAACGTTCTTAGTTTACT...TGGTGATAAACCCAAAACAAATGACAGGTCCTTATTTTCCACTAAACACAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR CCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGCCCCCTCGTCAGGGGTaGCTGCGATTAAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGPPRQG*LRLRLP
Trigger: TGGAAGCCTTAATCGCAGCCACCCCTGACGAGGGGG...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGCAGGTATTTCCTGGTaGACCGCCAGAGCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGAGISW*TARAPR
Trigger: TCTCGGAGCTCTGGCGGTCCACCAGGAAATACCTGC...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGCCAGCAATCCTCAACTaGATCCAGTGCCCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGPAILN*IQCPAR
Trigger: CCTAGCTGGGCACTGGATGCAGTTGAGGATTGCTGG...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265517.10
ENST00000457717.6
CDS-3UTR CCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTGCAGTGGTAGCCAGGTaGCTGATGGGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPAVVAR*LMGPSP
Trigger: AGGAGAAGGGCCCATCAGCCACCTGGCTACCACTGC...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTCCCCCTCGTCAGGGGTaGCTGCGATTAAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPPPRQG*LRLRLP
Trigger: TGGAAGCCTTAATCGCAGCCACCCCTGACGAGGGGG...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGAGGCCAGGAAGTTTCTaGCAGCCTCAGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGRPGSF*QPQPWK
Trigger: TTTCCAAGGCTGAGGCTGTCAGAAACTTCCTGGCCT...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAAGTACTATCCGGCTaGGGGGCAAACACCACTTTG +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGEVLSG*GANTTL
Trigger: CAAAGTGGTGTTTGCCCCTCAGCCGGATAGTACTTC...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTGGCTCTGGAAGACCTaGCCCACAATGGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPWLWKT*PTMGMA
Trigger: GGCCATTCCCATTGTGGGGCAGGTCTTCCAGAGCCA...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTGGCTCTGGAAGACCTaGCCCACAATGGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKWLWKT*PTMGMA
Trigger: GGCCATTCCCATTGTGGGGCAGGTCTTCCAGAGCCA...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGTCAGAAGACTTGGGATaGCTTCTGGAAGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGSEDLG*LLEAGH
Trigger: ATGCCCTGCTTCCAGAAGGCATCCCAAGTCTTCTGA...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTCTTCAGTGGAGTACGTaGGCTTGTACAGCCGGTCAT +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPLQWST*ACTAGH
Trigger: ATGACCGGCTGTACAAGCTCACGTACTCCACTGAAG...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCACCACCTGGCTACCGTaGAGACCAGCCTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVTTWLP*RPAFPM
Trigger: CATTGGGAAGGCTGGTCTTCACGGTAGCCAGGTGGT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGACCCAAGACCTGATTTaGGGTCGTAAATCCAGACCT +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGTQDLI*GRKSRP
Trigger: AGGTCTGGATTTACGACCCCAAATCAGGTCTTGGGT...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGGGACATCCTTTACAGTaGCTCTGGAAGACCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKGHPLQ*LWKTCP
Trigger: GGGGCAGGTCTTCCAGAGCCACTGTAAAGGATGTCC...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAGCTGCAGGTATTTCCTaGTGGACCGCCAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPAAGIS*WTARAP
Trigger: CGGAGCTCTGGCGGTCCACCAGGAAATACCTGCAGC...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGAGGCCAGGAAGTTTCTaGCAGCCTCAGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKRPGSF*QPQPWK
Trigger: TTTCCAAGGCTGAGGCTGTCAGAAACTTCCTGGCCT...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGAATGAGTCTGAGGTCTaGGCAGAGGTGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKNESEV*AEVTAS
Trigger: GGATGCTGTCACCTCTGCTCAGACCTCAGACTCATT...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCTTCAATGGCAGCCAGTaGGGGAGTGACCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVFNGSQ*GSDPLQ
Trigger: CTGAAGAGGGTCACTCCCTCACTGGCTGCCATTGAA...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457717.6
CDS-3UTR CCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCAGGCCACATCCACGTTaGAGGAAATGCGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVRPHPR*RKCGSP
Trigger: TGGGCTACCGCATTTCCTCCAACGTGGATGTGGCCT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGCCTTTACAGTGGCTCTaGAAGACCTGCCCCACAATG +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKPLQWL*KTCPTM
Trigger: CATTGTGGGGCAGGTCTTCCAGAGCCACTGTAAAGG...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCGGACATCCTTTACAGTaGCTCTGGAAGACCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPGHPLQ*LWKTCP
Trigger: GGGGCAGGTCTTCCAGAGCCACTGTAAAGGATGTCC...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAGCAGGTATTTCCTGGTaGACCGCCAGAGCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPAGISW*TARAPR
Trigger: TCTCGGAGCTCTGGCGGTCCACCAGGAAATACCTGC...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTGCTGCAGGTATTTCCTaGTGGACCGCCAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFAAGIS*WTARAP
Trigger: CGGAGCTCTGGCGGTCCACCAGGAAATACCTGCAGC...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGCATAACCTCTGCCTGTaGACAGCCTTTCGTACTTTT +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGHNLCL*TAFRTF
Trigger: AAAAGTACGAAAGGCTGTCCACAGGCAGAGGTTATG...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGCTGACACCCAAGACCTaGTTTGGGGTCGTAAATCCA +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKLTPKT*FGVVNP
Trigger: TGGATTTACGACCCCAAATCAGGTCTTGGGTGTCAG...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTGACAGATGTAGCTTTTaGACTGACACCCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPDRCSF*TDTQDL
Trigger: CAGGTCTTGGGTGTCAGTTCAAAAGCTACATCTGTC...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCAGGCCAGGAAGTTTCTaGCAGCCTCAGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVRPGSF*QPQPWK
Trigger: TTTCCAAGGCTGAGGCTGTCAGAAACTTCCTGGCCT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCGCAGTCCTGAGGTGCTaGATGAAGGCCAGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPAVLRC*MKARKF
Trigger: AAACTTCCTGGCCTTCATTCAGCACCTCAGGACTGC...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCGCAGTCCTGAGGTGCTaGATGAAGGCCAGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVAVLRC*MKARKF
Trigger: AAACTTCCTGGCCTTCATTCAGCACCTCAGGACTGC...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGACAGCATCCACCAGCTaGGGTAATACTTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGTASTS*GNTSLF
Trigger: AAATAAGGAAGTATTACCTCAGCTGGTGGATGCTGT...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTACCACCTGGCTACCGTaGAGACCAGCCTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFTTWLP*RPAFPM
Trigger: CATTGGGAAGGCTGGTCTTCACGGTAGCCAGGTGGT...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGCACTTTGCACATCTCTaGGTTCTCTTGATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKHFAHL*VLLMER
Trigger: CCGCTCCATCAAGAGAACTCAGAGATGTGCAAAGTG...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCGAAGTACTATCCGGCTaGGGGGCAAACACCACTTTG +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPEVLSG*GANTTL
Trigger: CAAAGTGGTGTTTGCCCCTCAGCCGGATAGTACTTC...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGCTTGCAGTTTTCCTTTaGCCCGATCAAGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGLAVFL*PDQEEL
Trigger: AAGTTCTTCTTGATCGGGGCAAAGGAAAACTGCAAG...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACCACGTTGGAGGAAATaGGGTAGCCCACGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPPRWRK*GSPRCL
Trigger: AAGACAGCGTGGGCTACCGCATTTCCTCCAACGTGG...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTCAGAAGACTTGGGATaGCTTCTGGAAGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKSEDLG*LLEAGH
Trigger: ATGCCCTGCTTCCAGAAGGCATCCCAAGTCTTCTGA...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGGATGGGCCCTTCTCCTaGTTCTGCATACTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKDGPFS*FCILQK
Trigger: CTTCTGAAGTATGCAGAAGCAGGAGAAGGGCCCATC...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGTACTTCTCCTTAGAATaGCAGAACCCGAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGYFSLE*QNPSRE
Trigger: TTCTCTACTCGGGTTCTGGCATTCTAAGGAGAAGTA...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTGCCCCACAATGGGAATaGCCGTGTACTTTGAATCAA +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPAPQWE*PCTLNQ
Trigger: TTGATTCAAAGTACACGGCCATTCCCATTGTGGGGC...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCAGACCTGCCCCACAATaGGAATGGCCGTGTACTTTG +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPRPAPQ*EWPCTL
Trigger: CAAAGTACACGGCCATTCCCATTGTGGGGCAGGTCT...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTACAGTGGCTCTaGAAGACCTGCCCCACAATG +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVPLQWL*KTCPTM
Trigger: CATTGTGGGGCAGGTCTTCCAGAGCCACTGTAAAGG...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCCCTTTACAGTGGCTCTaGAAGACCTGCCCCACAATG +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPPLQWL*KTCPTM
Trigger: CATTGTGGGGCAGGTCTTCCAGAGCCACTGTAAAGG...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATACCCCCTCGTCAGGGGTaGCTGCGATTAAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIPPRQG*LRLRLP
Trigger: TGGAAGCCTTAATCGCAGCCACCCCTGACGAGGGGG...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTAGTTCTTCATTGGGATaGGAAGCAAATCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPSSSLG*EANPQA
Trigger: TGCCTGTGGATTTGCTTCTCATCCCAATGAAGAACT...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTAAGAGGAGTCCACTGTaGTGTCAGTGGTTATTACCA +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPKRSPL*CQWLLP
Trigger: TGGTAATAACCACTGACATCACAGTGGACTCCTCTT...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTACTAAGAATGGGTACTaGGAAAACTGCACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPTKNGY*ENCTVE
Trigger: CTCCACAGTGCAGTTTTCTCAGTACCCATTCTTAGT...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTATCTCTGAGTTCTCTTaGTGGAGCGGGAATTCACAT +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPISEFS*WSGNSH
Trigger: ATGTGAATTCCCGCTCCATCAAGAGAACTCAGAGAT...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCCACTTTGCACATCTCTaGGTTCTCTTGATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPHFAHL*VLLMER
Trigger: CCGCTCCATCAAGAGAACTCAGAGATGTGCAAAGTG...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATCAGCCAGTGAGGGAGTaGCCCTCTTCAGAACAAGAA +
Preference number: 4 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHQPVRE*PSSEQE
Trigger: TTCTTGTTCTGAAGAGGGTCACTCCCTCACTGGCTG...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457717.6
CDS-3UTR GCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTGCTTTGATTATGGCTaGAGCCTGCTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPCFDYG*SLLSRH
Trigger: ATGTCTGGAAAGCAGGCTGCAGCCATAATCAAAGCA...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCGAAAGGTTGTCAGGCTaGAGGTATTTCCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPERLSG*RYFLVD
Trigger: GTCCACCAGGAAATACCTGCAGCCTGACAACCTTTC...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTAGGCCACATCCACGTTaGAGGAAATGCGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFRPHPR*RKCGSP
Trigger: TGGGCTACCGCATTTCCTCCAACGTGGATGTGGCCT...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCGCAGTGGTAGCCAGGTaGCTGATGGGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVAVVAR*LMGPSP
Trigger: AGGAGAAGGGCCCATCAGCCACCTGGCTACCACTGC...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGCCTGGACCTCTATATTaGCTTTTAGTCCAGATTGTA +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGPGPLY*LLVQIV
Trigger: TACAATCTGGACTAAAAGCCAATATAGAGGTCCAGG...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGGAGAGACCAGTTGTGTaGCCTTTAACAGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKERPVV*PLTEAE
Trigger: TTCAGCTTCTGTTAAAGGTCACACAACTGGTCTCTC...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265517.10
ENST00000457717.6
CDS-3UTR TCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTTTCCATGGATTAGATaGAGGAGCGTAGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKFPWIR*RSVGLC
Trigger: GCAAAGACCTACGCTCCTTCATCTAATCCATGGAAA...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCGACAGATGTAGCTTTTaGACTGACACCCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPDRCSF*TDTQDL
Trigger: CAGGTCTTGGGTGTCAGTTCAAAAGCTACATCTGTC...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTTGAATCAACTGCTTTaGTTATGGCTGCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKLNQLL*LWLQPA
Trigger: AGCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAA...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGCTTCCACTACTGCTTTaGGTTTGCAGCCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKLPLLL*VCSLHS
Trigger: AGAATGAAGGCTGCAAACTCAAAGCAGTAGTGGAAG...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCACAGCAGGATGTTCTTaGCGTCCATGTAGGATGGAT +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVTAGCS*RPCRMD
Trigger: ATCCATCCTACATGGACGTCAAGAACATCCTGCTGT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCATCAAAGAGGATGGCTaGCATACCAGCATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVIKEDG*HTSIGV
Trigger: GACTCCTATGCTGGTATGTCAGCCATCCTCTTTGAT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCATCAAAGAGGATGGCTaGCATACCAGCATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPIKEDG*HTSIGV
Trigger: GACTCCTATGCTGGTATGTCAGCCATCCTCTTTGAT...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTGAAGTACTATCCGGCTaGGGGGCAAACACCACTTTG +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFEVLSG*GANTTL
Trigger: CAAAGTGGTGTTTGCCCCTCAGCCGGATAGTACTTC...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATCATCAATCTTGGGCCTaGTTCGGTTGTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHHQSWA*FGCLQL
Trigger: GAGCTGAAGACAACCGAAGCAGGCCCAAGATTGATG...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTGCTTTGATTATGGCTaGAGCCTGCTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKCFDYG*SLLSRH
Trigger: ATGTCTGGAAAGCAGGCTGCAGCCATAATCAAAGCA...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCTGGCTCTGGAAGACCTaGCCCACAATGGGAATGGCC +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVWLWKT*PTMGMA
Trigger: GGCCATTCCCATTGTGGGGCAGGTCTTCCAGAGCCA...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAGAAAGGTTGTCAGGCTaGAGGTATTTCCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPERLSG*RYFLVD
Trigger: GTCCACCAGGAAATACCTGCAGCCTGACAACCTTTC...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCATCAGAAGACTTGGGATaGCTTCTGGAAGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPSEDLG*LLEAGH
Trigger: ATGCCCTGCTTCCAGAAGGCATCCCAAGTCTTCTGA...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTGATAAACTCCAAGCCTaGTTCTGTTTCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPDKLQA*FCFCTG
Trigger: ACCAGTACAGAAACAGAAGCAGGCTTGGAGTTTATC...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGTACTTTTTCTCAAATTaGCTGAATGGAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGYFFSN*LNGASS
Trigger: GGATGAAGCTCCATTCAGGCAATTTGAGAAAAAGTA...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGGGGCAAACACCACTTTaGACATCTCTGAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKGQTPL*TSLSSL
Trigger: AAGAGAACTCAGAGATGTGCAAAGTGGTGTTTGCCC...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GAAACAAATTGGCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGAAGGCCACATCCACGTTaGAGGAAATGCGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: ETNWLVNVRELRALIQFGRPHPR*RKCGSP
Trigger: TGGGCTACCGCATTTCCTCCAACGTGGATGTGGCCT...TCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGCCAATTTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCTCCAGACATCAATCTTaGGCCTGCTTCGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVSRHQS*ACFGCL
Trigger: AAGACAACCGAAGCAGGCCCAAGATTGATGTCTGGA...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGGCTGCAGGTATTTCCTaGTGGACCGCCAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKAAAGIS*WTARAP
Trigger: CGGAGCTCTGGCGGTCCACCAGGAAATACCTGCAGC...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGGCAGTGGTAGCCAGGTaGCTGATGGGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKAAVVAR*LMGPSP
Trigger: AGGAGAAGGGCCCATCAGCCACCTGGCTACCACTGC...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTGGGAGATCATATCTCTaGAGAGCAGTGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFGRSYL*RAVVAR
Trigger: CCTGGCTACCACTGCTCTCCAGAGATATGATCTCCC...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTATAGCTAGACCACCCTaGACCTCTATATTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPIARPP*TSILAF
Trigger: AAAAGCCAATATAGAGGTCCAGGGTGGTCTAGCTAT...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATCCAGCTAGGAGTCACTaGGAAGTGGACTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHPARSH*EVDSFN
Trigger: ATTGAAAGAGTCCACTTCTCAGTGACTCCTAGCTGG...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265517.10
ENST00000457717.6
CDS-3UTR TCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTCTGACACCCAAGACCTaGTTTGGGGTCGTAAATCCA +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFLTPKT*FGVVNP
Trigger: TGGATTTACGACCCCAAATCAGGTCTTGGGTGTCAG...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAGACAGATGTAGCTTTTaGACTGACACCCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPDRCSF*TDTQDL
Trigger: CAGGTCTTGGGTGTCAGTTCAAAAGCTACATCTGTC...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCAGTTCTTCATTGGGATaGGAAGCAAATCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPSSSLG*EANPQA
Trigger: TGCCTGTGGATTTGCTTCTCATCCCAATGAAGAACT...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCCTTCCACTACTGCTTTaGGTTTGCAGCCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPLPLLL*VCSLHS
Trigger: AGAATGAAGGCTGCAAACTCAAAGCAGTAGTGGAAG...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCCGCACAGTCTTTTCATaGACTTTACGGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPRTVFS*TLRFWW
Trigger: CCACCAAAACCGTAAAGTTCATGAAAAGACTGTGCG...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGGCCTTCCCAATGTACTaGAAGATGTTCAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKAFPMY*KMFRLL
Trigger: AAGTAACCTGAACATCTTTCAGTACATTGGGAAGGC...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGACCACCTGGCTACCGTaGAGACCAGCCTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKATTWLP*RPAFPM
Trigger: CATTGGGAAGGCTGGTCTTCACGGTAGCCAGGTGGT...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCAAGAGGAGTCCACTGTaGTGTCAGTGGTTATTACCA +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVKRSPL*CQWLLP
Trigger: TGGTAATAACCACTGACATCACAGTGGACTCCTCTT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCACTAAGAATGGGTACTaGGAAAACTGCACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVTKNGY*ENCTVE
Trigger: CTCCACAGTGCAGTTTTCTCAGTACCCATTCTTAGT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACTGGAGGTAGAGACCTaGATGTCTTTGGAACAACCT +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPLEVET*MSLEQP
Trigger: AGGTTGTTCCAAAGACATTCAGGTCTCTACCTCCAG...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR GCA 90 bp TTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGATGACTTGCTTTGTTACACCACGTTGGAGGAAATaGGGTAGCCCACGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSPFLNSSNHALMTCFVTPRWRK*GSPRCL
Trigger: AAGACAGCGTGGGCTACCGCATTTCCTCCAACGTGG...TGTAACAAAGCAAGTCATCAAAGCATGATTGGATGAATTCAGGAAAGGAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR GCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCACCACGTTGGAGGAAATaGGGTAGCCCACGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSPRWRK*GSPRCL
Trigger: AAGACAGCGTGGGCTACCGCATTTCCTCCAACGTGG...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTCATCAATCTTGGGCCTaGTTCGGTTGTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFHQSWA*FGCLQL
Trigger: GAGCTGAAGACAACCGAAGCAGGCCCAAGATTGATG...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCCTTAGCTTCCACTACTaGTTTGAGTTTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPLSFHY*FEFAAF
Trigger: GAAGGCTGCAAACTCAAAGCAGTAGTGGAAGCTAAG...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACCCTTCTCCTGCTTCTaGATACTTCAGAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPPFSCF*ILQKTW
Trigger: CCAAGTCTTCTGAAGTATGCAGAAGCAGGAGAAGGG...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCGGGCAAACACCACTTTaGACATCTCTGAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVGQTPL*TSLSSL
Trigger: AAGAGAACTCAGAGATGTGCAAAGTGGTGTTTGCCC...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTCTGTGGGTAGCATACTaGATATACCCAAATTTGATC +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPLWVAY*IYPNLI
Trigger: GATCAAATTTGGGTATATGCAGTATGCTACCCACAG...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCAGGCCACATCCACGTTaGAGGAAATGCGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVRPHPR*RKCGSP
Trigger: TGGGCTACCGCATTTCCTCCAACGTGGATGTGGCCT...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTCCAGACATCAATCTTaGGCCTGCTTCGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHSRHQS*ACFGCL
Trigger: AAGACAACCGAAGCAGGCCCAAGATTGATGTCTGGA...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGGCAGGTATTTCCTGGTaGACCGCCAGAGCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKAAGISW*TARAPR
Trigger: TCTCGGAGCTCTGGCGGTCCACCAGGAAATACCTGC...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTCAGGAGTTCTTCATTaGGATGAGAAGCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKSGVLH*DEKQIH
Trigger: GTGGATTTGCTTCTCATCCCAATGAAGAACTCCTGA...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAACTTGGGATGCCTTCTaGAAGCAGGGCATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPTWDAF*KQGILQ
Trigger: TTGAAGAATGCCCTGCTTCCAGAAGGCATCCCAAGT...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGACTTTACGGTTTTGGTaGTATATTCTGTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGTLRFW*YILFKV
Trigger: GACCTTAAACAGAATATACCACCAAAACCGTAAAGT...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCGAACATCAAAGAGGATaGCTGACATACCAGCATAGG +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPEHQRG*LTYQHR
Trigger: CCTATGCTGGTATGTCAGCCATCCTCTTTGATGTTC...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCATTCAAAACCATCCGCTaGAAGTACTATCCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPFKTIR*KYYPAE
Trigger: CTCAGCCGGATAGTACTTCCAGCGGATGGTTTTGAA...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTCCAGCTAGGAGTCACTaGGAAGTGGACTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFPARSH*EVDSFN
Trigger: ATTGAAAGAGTCCACTTCTCAGTGACTCCTAGCTGG...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265517.10
ENST00000457717.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCAAGAAGAATCATATTaGCCAGCAATCCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVQEESY*PAILNC
Trigger: GCAGTTGAGGATTGCTGGTCAATATGATTCTTCTTG...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265517.10
ENST00000457717.6
CDS-3UTR TCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCCTTCAGTGGAGTACGTaGGCTTGTACAGCCGGTCAT +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVLQWST*ACTAGH
Trigger: ATGACCGGCTGTACAAGCTCACGTACTCCACTGAAG...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATACTGACACCCAAGACCTaGTTTGGGGTCGTAAATCCA +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKILTPKT*FGVVNP
Trigger: TGGATTTACGACCCCAAATCAGGTCTTGGGTGTCAG...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTTGAATCAACTGCTTTaGTTATGGCTGCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHLNQLL*LWLQPA
Trigger: AGCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAA...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTAATGGCCGTGTACTTTaGATCAACTGCTTTGATTAT +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPNGRVL*INCFDY
Trigger: ATAATCAAAGCAGTTGATTCAAAGTACACGGCCATT...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCGCAGTCCTGAGGTGCTaGATGAAGGCCAGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVAVLRC*MKARKF
Trigger: AAACTTCCTGGCCTTCATTCAGCACCTCAGGACTGC...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCAATGAGTCTGAGGTCTaGGCAGAGGTGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVNESEV*AEVTAS
Trigger: GGATGCTGTCACCTCTGCTCAGACCTCAGACTCATT...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAAGTTCTTCATTGGGATaGGAAGCAAATCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPSSSLG*EANPQA
Trigger: TGCCTGTGGATTTGCTTCTCATCCCAATGAAGAACT...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCTTGCAGCCTTCATTCTaGCACAACTTTCTGACAAGT +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPLQPSF*HNFLTS
Trigger: ACTTGTCAGAAAGTTGTGTCAGAATGAAGGCTGCAA...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACTTCCACTACTGCTTTaGGTTTGCAGCCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPLPLLL*VCSLHS
Trigger: AGAATGAAGGCTGCAAACTCAAAGCAGTAGTGGAAG...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCAAACGTAGGATGTCTTaGACAATGGCGAGCATGTAT +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVKRRMS*TMASMY
Trigger: ATACATGCTCGCCATTGTTCAAGACATCCTACGTTT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCGCCTTCCCAATGTACTaGAAGATGTTCAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVAFPMY*KMFRLL
Trigger: AAGTAACCTGAACATCTTTCAGTACATTGGGAAGGC...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCGCCTTCCCAATGTACTaGAAGATGTTCAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPAFPMY*KMFRLL
Trigger: AAGTAACCTGAACATCTTTCAGTACATTGGGAAGGC...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCAAAGGTGAGATAAAATaGGGATGTCCCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVKGEIK*GCPLED
Trigger: GTCCTCTAAGGGACATCCTCATTTTATCTCACCTTT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR TCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTACAAGAATATATGAATaGATACACGTCTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPTRIYE*IHVCRY
Trigger: GTACCTGCAGACGTGTATTCATTCATATATTCTTGT...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TCATTTCAGTCTCATAATTTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGCCAGCAATCCTCAACTaGATCCAGTGCCCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: SFQSHNLSPFLNSSNHALPAILN*IQCPAR
Trigger: CCTAGCTGGGCACTGGATGCAGTTGAGGATTGCTGG...CAAAGCATGATTGGATGAATTCAGGAAAGGAGACAAATTATGAGACTGAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR GCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGCCAGCAATCCTCAACTaGATCCAGTGCCCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKAPAILN*IQCPAR
Trigger: CCTAGCTGGGCACTGGATGCAGTTGAGGATTGCTGG...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265517.10
ENST00000457717.6
CDS-3UTR GCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTAGGAGCGTAGGTCTTTaGAGAGCTTCCAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFRSVGL*RASKFS
Trigger: GGAAAACTTGGAAGCTCTGCAAAGACCTACGCTCCT...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACTTAGCTTCCACTACTaGTTTGAGTTTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPLSFHY*FEFAAF
Trigger: GAAGGCTGCAAACTCAAAGCAGTAGTGGAAGCTAAG...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCTCATCCTTGTCCATCTaGATGCAAACTAAGAATGGG +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPSSLSI*MQTKNG
Trigger: CCCATTCTTAGTTTGCATGCAGATGGACAAGGATGA...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTACCCAAGACCTGATTTaGGGTCGTAAATCCAGACCT +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFTQDLI*GRKSRP
Trigger: AGGTCTGGATTTACGACCCCAAATCAGGTCTTGGGT...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTTCCAGACATCAATCTTaGGCCTGCTTCGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFSRHQS*ACFGCL
Trigger: AAGACAACCGAAGCAGGCCCAAGATTGATGTCTGGA...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TGTCTGTGTTTAGTGGAAAATAAGGACCTGTCATTTGTTTTGGGTTTATCACCAAGACCTGCCCCACAATaGGAATGGCCGTGTACTTTG +
Preference number: 4 (lower is better)
Translates to: CLCLVENKDLSFVLGLSPRPAPQ*EWPCTL
Trigger: CAAAGTACACGGCCATTCCCATTGTGGGGCAGGTCT...TGGTGATAAACCCAAAACAAATGACAGGTCCTTATTTTCCACTAAACACAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR CCA 90 bp TGTCTGTGTTTAGTGGAAAATAAGGACCTGTCATTTGTTTTGGGTTTATCACCAGGGAGATCATATCTCTaGAGAGCAGTGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CLCLVENKDLSFVLGLSPGRSYL*RAVVAR
Trigger: CCTGGCTACCACTGCTCTCCAGAGATATGATCTCCC...TGGTGATAAACCCAAAACAAATGACAGGTCCTTATTTTCCACTAAACACAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR CCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAGGGAGATCATATCTCTaGAGAGCAGTGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSGRSYL*RAVVAR
Trigger: CCTGGCTACCACTGCTCTCCAGAGATATGATCTCCC...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTATTTATTCATTTCTTaGGGAAGCTCCCCAATAGAC +
Preference number: 4 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPYLFIS*GSSPID
Trigger: GTCTATTGGGGAGCTTCCCCAAGAAATGAATAAATA...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCTCAAATTGCCTGAATaGAGCTTCATCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVLKLPE*SFILVH
Trigger: ATGGACAAGGATGAAGCTCCATTCAGGCAATTTGAG...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAAACAAATTGGCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGACCAGCTAGGAGTCACTaGGAAGTGGACTCTTTCAAT +
Preference number: 4 (lower is better)
Translates to: ETNWLVNVRELRALIQFGPARSH*EVDSFN
Trigger: ATTGAAAGAGTCCACTTCTCAGTGACTCCTAGCTGG...TCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGCCAATTTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR TCA 90 bp GCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGAAACATTTAATTCTTCAGTGGAGTACGTaGGCTTGTACAGCCGGTCAT +
Preference number: 4 (lower is better)
Translates to: ASKCKGTQGIDSVWKHLILQWST*ACTAGH
Trigger: ATGACCGGCTGTACAAGCTCACGTACTCCACTGAAG...AATTAAATGTTTCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR TCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTTTTCCATGGATTAGATaGAGGAGCGTAGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFFPWIR*RSVGLC
Trigger: GCAAAGACCTACGCTCCTTCATCTAATCCATGGAAA...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGATGAGTAGAACTCTTTaGCCTTTCCATGGATTAGAT +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKMSRTL*PFHGLD
Trigger: ATCTAATCCATGGAAAGGTCAAAGAGTTCTACTCAT...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGAATGAGTCTGAGGTCTaGGCAGAGGTGACAGCATCC +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKANESEV*AEVTAS
Trigger: GGATGCTGTCACCTCTGCTCAGACCTCAGACTCATT...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTTGCAGCCTTCATTCTaGCACAACTTTCTGACAAGT +
Preference number: 4 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHLQPSF*HNFLTS
Trigger: ACTTGTCAGAAAGTTGTGTCAGAATGAAGGCTGCAA...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAAAACGTAGGATGTCTTaGACAATGGCGAGCATGTAT +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPKRRMS*TMASMY
Trigger: ATACATGCTCGCCATTGTTCAAGACATCCTACGTTT...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAAGGGTCGCCAGATGCTaGCAGCATTTTGGACATCAA +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSRVARC*QHFGHQ
Trigger: TTGATGTCCAAAATGCTGTCAGCATCTGGCGACCCT...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCAGGGTCGCCAGATGCTaGCAGCATTTTGGACATCAA +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVRVARC*QHFGHQ
Trigger: TTGATGTCCAAAATGCTGTCAGCATCTGGCGACCCT...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TGTCTGTGTTTAGTGGAAAATAAGGACCTGTCATTTGTTTTGGGTTTATCACCACACTTTGCACATCTCTaGGTTCTCTTGATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: CLCLVENKDLSFVLGLSPHFAHL*VLLMER
Trigger: CCGCTCCATCAAGAGAACTCAGAGATGTGCAAAGTG...TGGTGATAAACCCAAAACAAATGACAGGTCCTTATTTTCCACTAAACACAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR TCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATACAGAGTACAGTTAAATaGACTAGAGCTCTCACCCCC +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIQSTVK*TRALTP
Trigger: GGGGGTGAGAGCTCTAGTTCATTTAACTGTACTCTG...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR TCA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGGAGAGACCAGTTGTGTaGCAAGAATATATGAATGAA +
Preference number: 4 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKERPVV*QEYMNE
Trigger: TTCATTCATATATTCTTGTCACACAACTGGTCTCTC...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511045.6
CDS-3UTR GCA 90 bp GAAACAAATTGGCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGAAGGAGCGTAGGTCTTTaGAGAGCTTCCAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: ETNWLVNVRELRALIQFGRSVGL*RASKFS
Trigger: GGAAAACTTGGAAGCTCTGCAAAGACCTACGCTCCT...TCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGCCAATTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR GCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATAAGGAGCGTAGGTCTTTaGAGAGCTTCCAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIRSVGL*RASKFS
Trigger: GGAAAACTTGGAAGCTCTGCAAAGACCTACGCTCCT...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCCATCAATCTTGGGCCTaGTTCGGTTGTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVHQSWA*FGCLQL
Trigger: GAGCTGAAGACAACCGAAGCAGGCCCAAGATTGATG...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAGAAAGGTTGTCAGGCTaGAGGTATTTCCTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSERLSG*RYFLVD
Trigger: GTCCACCAGGAAATACCTGCAGCCTGACAACCTTTC...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATACCCTTCTCCTGCTTCTaGATACTTCAGAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIPFSCF*ILQKTW
Trigger: CCAAGTCTTCTGAAGTATGCAGAAGCAGGAGAAGGG...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCGATGGGCCCTTCTCCTaGTTCTGCATACTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVDGPFS*FCILQK
Trigger: CTTCTGAAGTATGCAGAAGCAGGAGAAGGGCCCATC...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAGATAAACTCCAAGCCTaGTTCTGTTTCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPDKLQA*FCFCTG
Trigger: ACCAGTACAGAAACAGAAGCAGGCTTGGAGTTTATC...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATCCTTGTCCATCTGCATaGAAACTAAGAATGGGTACT +
Preference number: 4 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHPCPSA*KLRMGT
Trigger: AGTACCCATTCTTAGTTTGCATGCAGATGGACAAGG...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCGTTATTTGGATCAACTaGTCATCATCACCATCAGGA +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPVIWIN*SSSPSG
Trigger: TCCTGATGGTGATGATGACCAGTTGATCCAAATAAC...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCAGATATCTACCTCATTaGTGGTTCCAGAGCTTAACT +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPRYLPH*WFQSLT
Trigger: AGTTAAGCTCTGGAACCACCAATGAGGTAGATATCT...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATAACCCAAGACCTGATTTaGGGTCGTAAATCCAGACCT +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKITQDLI*GRKSRP
Trigger: AGGTCTGGATTTACGACCCCAAATCAGGTCTTGGGT...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATAGCCCCACAATGGGAATaGCCGTGTACTTTGAATCAA +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIAPQWE*PCTLNQ
Trigger: TTGATTCAAAGTACACGGCCATTCCCATTGTGGGGC...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATAACTTGGGATGCCTTCTaGAAGCAGGGCATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKITWDAF*KQGILQ
Trigger: TTGAAGAATGCCCTGCTTCCAGAAGGCATCCCAAGT...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTGAACATCAAAGAGGATaGCTGACATACCAGCATAGG +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFEHQRG*LTYQHR
Trigger: CCTATGCTGGTATGTCAGCCATCCTCTTTGATGTTC...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCCCTGGACCTCTATATTaGCTTTTAGTCCAGATTGTA +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPPGPLY*LLVQIV
Trigger: TACAATCTGGACTAAAAGCCAATATAGAGGTCCAGG...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATATTCAAAACCATCCGCTaGAAGTACTATCCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIFKTIR*KYYPAE
Trigger: CTCAGCCGGATAGTACTTCCAGCGGATGGTTTTGAA...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCTTCAAAATGACGCTGTaGGTAGCATACTGCATATAC +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVFKMTL*VAYCIY
Trigger: GTATATGCAGTATGCTACCCACAGCGTCATTTTGAA...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCTTCAAAATGACGCTGTaGGTAGCATACTGCATATAC +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPFKMTL*VAYCIY
Trigger: GTATATGCAGTATGCTACCCACAGCGTCATTTTGAA...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCACAGCAGGATGTTCTTaGCGTCCATGTAGGATGGAT +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVTAGCS*RPCRMD
Trigger: ATCCATCCTACATGGACGTCAAGAACATCCTGCTGT...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAATCAAAGAGGATGGCTaGCATACCAGCATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSIKEDG*HTSIGV
Trigger: GACTCCTATGCTGGTATGTCAGCCATCCTCTTTGAT...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGAGGGTCGCCAGATGCTaGCAGCATTTTGGACATCAA +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKARVARC*QHFGHQ
Trigger: TTGATGTCCAAAATGCTGTCAGCATCTGGCGACCCT...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCATTTTCTCAAATTGCCTaGATGGAGCTTCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPFSQIA*MELHPC
Trigger: ACAAGGATGAAGCTCCATTCAGGCAATTTGAGAAAA...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATAATCTCTGAGTTCTCTTaGTGGAGCGGGAATTCACAT +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIISEFS*WSGNSH
Trigger: ATGTGAATTCCCGCTCCATCAAGAGAACTCAGAGAT...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCCAGAACAAGAATATATaGATGAATACACGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPQNKNI*MNTRLQ
Trigger: CTGCAGACGTGTATTCATTCATATATTCTTGTTCTG...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457717.6
CDS-3UTR GCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATACTTAGCTTCCACTACTaGTTTGAGTTTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKILSFHY*FEFAAF
Trigger: GAAGGCTGCAAACTCAAAGCAGTAGTGGAAGCTAAG...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTGATAAACTCCAAGCCTaGTTCTGTTTCTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFDKLQA*FCFCTG
Trigger: ACCAGTACAGAAACAGAAGCAGGCTTGGAGTTTATC...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTCCTTGTCCATCTGCATaGAAACTAAGAATGGGTACT +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFPCPSA*KLRMGT
Trigger: AGTACCCATTCTTAGTTTGCATGCAGATGGACAAGG...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACTGTGGGTAGCATACTaGATATACCCAAATTTGATC +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPLWVAY*IYPNLI
Trigger: GATCAAATTTGGGTATATGCAGTATGCTACCCACAG...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAAGATATCTACCTCATTaGTGGTTCCAGAGCTTAACT +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPRYLPH*WFQSLT
Trigger: AGTTAAGCTCTGGAACCACCAATGAGGTAGATATCT...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTTCAGGAGTTCTTCATTaGGATGAGAAGCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFSGVLH*DEKQIH
Trigger: GTGGATTTGCTTCTCATCCCAATGAAGAACTCCTGA...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCGGATGTCTTGAACAATaGCGAGCATGTATTTATTCA +
Preference number: 4 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPGCLEQ*RACIYS
Trigger: TGAATAAATACATGCTCGCCATTGTTCAAGACATCC...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATAAGAAGATCCACTCCTaGAGAAACGGTCATAATTGT +
Preference number: 4 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHKKIHS*RNGHNC
Trigger: ACAATTATGACCGTTTCTCCAGGAGTGGATCTTCTT...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATAGAACATCAAAGAGGATaGCTGACATACCAGCATAGG +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIEHQRG*LTYQHR
Trigger: CCTATGCTGGTATGTCAGCCATCCTCTTTGATGTTC...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTATAGCTAGACCACCCTaGACCTCTATATTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFIARPP*TSILAF
Trigger: AAAAGCCAATATAGAGGTCCAGGGTGGTCTAGCTAT...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATACATAACCTCTGCCTGTaGACAGCCTTTCGTACTTTT +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIHNLCL*TAFRTF
Trigger: AAAAGTACGAAAGGCTGTCCACAGGCAGAGGTTATG...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAGAGAGACCAGTTGTGTaGCCTTTAACAGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSERPVV*PLTEAE
Trigger: TTCAGCTTCTGTTAAAGGTCACACAACTGGTCTCTC...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265517.10
ENST00000457717.6
CDS-3UTR TCA 90 bp TTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGATGACTTGCTTTGTTACATTTCCATGGATTAGATaGAGGAGCGTAGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LSPFLNSSNHALMTCFVTFPWIR*RSVGLC
Trigger: GCAAAGACCTACGCTCCTTCATCTAATCCATGGAAA...TGTAACAAAGCAAGTCATCAAAGCATGATTGGATGAATTCAGGAAAGGAGACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR TCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCTTTCCATGGATTAGATaGAGGAGCGTAGGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVFPWIR*RSVGLC
Trigger: GCAAAGACCTACGCTCCTTCATCTAATCCATGGAAA...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGCCTCATTTTGATATaGGTAGAACTCTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHCLILI*VELFDL
Trigger: AAGGTCAAAGAGTTCTACTCATATCAAAATGAGGCA...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCTTGAATCAACTGCTTTaGTTATGGCTGCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVLNQLL*LWLQPA
Trigger: AGCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAA...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCACGCACAGTCTTTTCATaGACTTTACGGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSRTVFS*TLRFWW
Trigger: CCACCAAAACCGTAAAGTTCATGAAAAGACTGTGCG...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCCGCACAGTCTTTTCATaGACTTTACGGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVRTVFS*TLRFWW
Trigger: CCACCAAAACCGTAAAGTTCATGAAAAGACTGTGCG...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAAAGAGGAGTCCACTGTaGTGTCAGTGGTTATTACCA +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSKRSPL*CQWLLP
Trigger: TGGTAATAACCACTGACATCACAGTGGACTCCTCTT...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAATCTCTGAGTTCTCTTaGTGGAGCGGGAATTCACAT +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSISEFS*WSGNSH
Trigger: ATGTGAATTCCCGCTCCATCAAGAGAACTCAGAGAT...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAACAAGAATATATGAATaGATACACGTCTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPTRIYE*IHVCRY
Trigger: GTACCTGCAGACGTGTATTCATTCATATATTCTTGT...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp GAAACAAATTGGCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGACTTGCAGTTTTCCTTTaGCCCGATCAAGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: ETNWLVNVRELRALIQFGLAVFL*PDQEEL
Trigger: AAGTTCTTCTTGATCGGGGCAAAGGAAAACTGCAAG...TCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGCCAATTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR GCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGAGGAGCGTAGGTCTTTaGAGAGCTTCCAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKARSVGL*RASKFS
Trigger: GGAAAACTTGGAAGCTCTGCAAAGACCTACGCTCCT...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCATTCAGCTCTAATTTCTaGTTCGATACTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPFSSNF*FDTIFP
Trigger: GGGGAAAATAGTATCGAAGCAGAAATTAGAGCTGAA...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCTGCTTTGATTATGGCTaGAGCCTGCTTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVCFDYG*SLLSRH
Trigger: ATGTCTGGAAAGCAGGCTGCAGCCATAATCAAAGCA...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGCCCTTCTCCTGCTTCTaGATACTTCAGAAGACTTGG +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKAPFSCF*ILQKTW
Trigger: CCAAGTCTTCTGAAGTATGCAGAAGCAGGAGAAGGG...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATACCTTGTCCATCTGCATaGAAACTAAGAATGGGTACT +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIPCPSA*KLRMGT
Trigger: AGTACCCATTCTTAGTTTGCATGCAGATGGACAAGG...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCGGGCAAACACCACTTTaGACATCTCTGAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVGQTPL*TSLSSL
Trigger: AAGAGAACTCAGAGATGTGCAAAGTGGTGTTTGCCC...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTTTGGTTTTCCCGTCATaGTTAAGGAAGTCCTATCAA +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFLVFPS*LRKSYQ
Trigger: TTGATAGGACTTCCTTAAGCATGACGGGAAAACCAA...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR CCA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTCCTTCATCGTTATTTaGATCAACTGGTCATCATCA +
Preference number: 4 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHSFIVI*INWSSS
Trigger: TGATGATGACCAGTTGATCCAAATAACGATGAAGGA...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCATCCTTCATCGTTATTTaGATCAACTGGTCATCATCA +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPSFIVI*INWSSS
Trigger: TGATGATGACCAGTTGATCCAAATAACGATGAAGGA...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGGCCCCACAATGGGAATaGCCGTGTACTTTGAATCAA +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKAAPQWE*PCTLNQ
Trigger: TTGATTCAAAGTACACGGCCATTCCCATTGTGGGGC...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCACTTTACGGTTTTGGTaGTATATTCTGTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVTLRFW*YILFKV
Trigger: GACCTTAAACAGAATATACCACCAAAACCGTAAAGT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATGGATGTCTTGAACAATaGCGAGCATGTATTTATTCA +
Preference number: 4 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHGCLEQ*RACIYS
Trigger: TGAATAAATACATGCTCGCCATTGTTCAAGACATCC...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAGGATGTCTTGAACAATaGCGAGCATGTATTTATTCA +
Preference number: 4 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPGCLEQ*RACIYS
Trigger: TGAATAAATACATGCTCGCCATTGTTCAAGACATCC...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTAAGAAGATCCACTCCTaGAGAAACGGTCATAATTGT +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFKKIHS*RNGHNC
Trigger: ACAATTATGACCGTTTCTCCAGGAGTGGATCTTCTT...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTCCTGGACCTCTATATTaGCTTTTAGTCCAGATTGTA +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFPGPLY*LLVQIV
Trigger: TACAATCTGGACTAAAAGCCAATATAGAGGTCCAGG...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTTCAAAACCATCCGCTaGAAGTACTATCCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKAFKTIR*KYYPAE
Trigger: CTCAGCCGGATAGTACTTCCAGCGGATGGTTTTGAA...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TTTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGATGACTTGCTTTGTTACCAAGAAGAATCATATTaGCCAGCAATCCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: FVSFPEFIQSCFDDLLCYQEESY*PAILNC
Trigger: GCAGTTGAGGATTGCTGGTCAATATGATTCTTCTTG...GTAACAAAGCAAGTCATCAAAGCATGATTGGATGAATTCAGGAAAGGAGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR TCA 90 bp GCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGAAACATTTAATTGAGAGACCAGTTGTGTaGCCTTTAACAGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ASKCKGTQGIDSVWKHLIERPVV*PLTEAE
Trigger: TTCAGCTTCTGTTAAAGGTCACACAACTGGTCTCTC...AATTAAATGTTTCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR TCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCACAGCATCCACCAGCTaGGGTAATACTTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVTASTS*GNTSLF
Trigger: AAATAAGGAAGTATTACCTCAGCTGGTGGATGCTGT...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAACAGCATCCACCAGCTaGGGTAATACTTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSTASTS*GNTSLF
Trigger: AAATAAGGAAGTATTACCTCAGCTGGTGGATGCTGT...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATATTTTCTCAAATTGCCTaGATGGAGCTTCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIFSQIA*MELHPC
Trigger: ACAAGGATGAAGCTCCATTCAGGCAATTTGAGAAAA...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTTTCAGCTCTAATTTCTaGTTCGATACTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFFSSNF*FDTIFP
Trigger: GGGGAAAATAGTATCGAAGCAGAAATTAGAGCTGAA...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TGTCTGTGTTTAGTGGAAAATAAGGACCTGTCATTTGTTTTGGGTTTATCACCATACTTCTCCTTAGAATaGCAGAACCCGAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: CLCLVENKDLSFVLGLSPYFSLE*QNPSRE
Trigger: TTCTCTACTCGGGTTCTGGCATTCTAAGGAGAAGTA...TGGTGATAAACCCAAAACAAATGACAGGTCCTTATTTTCCACTAAACACAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR GCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCATACTTCTCCTTAGAATaGCAGAACCCGAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSYFSLE*QNPSRE
Trigger: TTCTCTACTCGGGTTCTGGCATTCTAAGGAGAAGTA...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TGTCTGTGTTTAGTGGAAAATAAGGACCTGTCATTTGTTTTGGGTTTATCACCATCATCCTTGTCCATCTaGATGCAAACTAAGAATGGG +
Preference number: 4 (lower is better)
Translates to: CLCLVENKDLSFVLGLSPSSLSI*MQTKNG
Trigger: CCCATTCTTAGTTTGCATGCAGATGGACAAGGATGA...TGGTGATAAACCCAAAACAAATGACAGGTCCTTATTTTCCACTAAACACAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR CCA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTTATTTATTCATTTCTTaGGGAAGCTCCCCAATAGAC +
Preference number: 4 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFYLFIS*GSSPID
Trigger: GTCTATTGGGGAGCTTCCCCAAGAAATGAATAAATA...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAATAGCTAGACCACCCTaGACCTCTATATTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSIARPP*TSILAF
Trigger: AAAAGCCAATATAGAGGTCCAGGGTGGTCTAGCTAT...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCCTCAAATTGCCTGAATaGAGCTTCATCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVLKLPE*SFILVH
Trigger: ATGGACAAGGATGAAGCTCCATTCAGGCAATTTGAG...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCACTCAAATTGCCTGAATaGAGCTTCATCCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSLKLPE*SFILVH
Trigger: ATGGACAAGGATGAAGCTCCATTCAGGCAATTTGAG...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGCATAACCTCTGCCTGTaGACAGCCTTTCGTACTTTT +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKAHNLCL*TAFRTF
Trigger: AAAAGTACGAAAGGCTGTCCACAGGCAGAGGTTATG...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATATGCCTCATTTTGATATaGGTAGAACTCTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKICLILI*VELFDL
Trigger: AAGGTCAAAGAGTTCTACTCATATCAAAATGAGGCA...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATAAATGGCCGTGTACTTTaGATCAACTGCTTTGATTAT +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKINGRVL*INCFDY
Trigger: ATAATCAAAGCAGTTGATTCAAAGTACACGGCCATT...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGAAACGTAGGATGTCTTaGACAATGGCGAGCATGTAT +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKAKRRMS*TMASMY
Trigger: ATACATGCTCGCCATTGTTCAAGACATCCTACGTTT...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCTTTTCTCAAATTGCCTaGATGGAGCTTCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVFSQIA*MELHPC
Trigger: ACAAGGATGAAGCTCCATTCAGGCAATTTGAGAAAA...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp GCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGAAACATTTAATTGGGAACTCAGGGCATTaGTTCAGTTTGGAAACATTT +
Preference number: 4 (lower is better)
Translates to: ASKCKGTQGIDSVWKHLIGNSGH*FSLETF
Trigger: AAATGTTTCCAAACTGAATCAATGCCCTGAGTTCCC...AATTAAATGTTTCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR TCA 90 bp GAAACAAATTGGCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGAATTTGTCTCCTTTCCTaGATTCATCCAATCATGCTT +
Preference number: 4 (lower is better)
Translates to: ETNWLVNVRELRALIQFGICLLS*IHPIML
Trigger: AAGCATGATTGGATGAATTCAGGAAAGGAGACAAAT...TCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGCCAATTTGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR TCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATATGTGACAAGAATATATaGATGAATACACGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKICDKNI*MNTRLQ
Trigger: CTGCAGACGTGTATTCATTCATATATTCTTGTCACA...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511045.6
CDS-3UTR GCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCATCCTTGTCCATCTaGATGCAAACTAAGAATGGG +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKASSLSI*MQTKNG
Trigger: CCCATTCTTAGTTTGCATGCAGATGGACAAGGATGA...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATATACTTTTTCTCAAATTaGCTGAATGGAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIYFFSN*LNGASS
Trigger: GGATGAAGCTCCATTCAGGCAATTTGAGAAAAAGTA...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GAAACAAATTGGCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGATTGGAGAAAAAGTTGTaGAATCTAAACGCCCCTTTA +
Preference number: 4 (lower is better)
Translates to: ETNWLVNVRELRALIQFGLEKKL*NLNAPL
Trigger: TAAAGGGGCGTTTAGATTCCACAACTTTTTCTCCAA...TCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGCCAATTTGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR TCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGAGTAGAACTCTTTaGCCTTTCCATGGATTAGAT +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVMSRTL*PFHGLD
Trigger: ATCTAATCCATGGAAAGGTCAAAGAGTTCTACTCAT...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGAATCCACCAGTTTCTTaGAGCAATGTTCTCTTAGTC +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKANPPVS*SNVLLV
Trigger: GACTAAGAGAACATTGCTTCAAGAAACTGGTGGATT...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR GCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCTTCAGCTCTAATTTCTaGTTCGATACTATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVFSSNF*FDTIFP
Trigger: GGGGAAAATAGTATCGAAGCAGAAATTAGAGCTGAA...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCTACTTTTTCTCAAATTaGCTGAATGGAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVYFFSN*LNGASS
Trigger: GGATGAAGCTCCATTCAGGCAATTTGAGAAAAAGTA...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCATATTTATTCATTTCTTaGGGAAGCTCCCCAATAGAC +
Preference number: 4 (lower is better)
Translates to: ERGISKLRTLLKASHDDSYLFIS*GSSPID
Trigger: GTCTATTGGGGAGCTTCCCCAAGAAATGAATAAATA...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CCA 90 bp TGTCTGTGTTTAGTGGAAAATAAGGACCTGTCATTTGTTTTGGGTTTATCACCAACCTGTCATTTGTTTTaGGTTTATCACCACATCTGT +
Preference number: 4 (lower is better)
Translates to: CLCLVENKDLSFVLGLSPTCHLF*VYHHIC
Trigger: ACAGATGTGGTGATAAACCCAAAACAAATGACAGGT...TGGTGATAAACCCAAAACAAATGACAGGTCCTTATTTTCCACTAAACACAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR TCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTGCCTCATTTTGATATaGGTAGAACTCTTTGACCTT +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKACLILI*VELFDL
Trigger: AAGGTCAAAGAGTTCTACTCATATCAAAATGAGGCA...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR TCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGAATGGCCGTGTACTTTaGATCAACTGCTTTGATTAT +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKANGRVL*INCFDY
Trigger: ATAATCAAAGCAGTTGATTCAAAGTACACGGCCATT...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR GCA 90 bp TTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGATGACTTGCTTTGTTACACATGCTTTGATGACTTaGTTTGTTACATTACGTTTG +
Preference number: 4 (lower is better)
Translates to: LSPFLNSSNHALMTCFVTHALMT*FVTLRL
Trigger: CAAACGTAATGTAACAAAGCAAGTCATCAAAGCATG...TGTAACAAAGCAAGTCATCAAAGCATGATTGGATGAATTCAGGAAAGGAGACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR GCA 90 bp TTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGATGACTTGCTTTGTTACAGAATTCATCCAATCATaGTTTGATGACTTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LSPFLNSSNHALMTCFVTEFIQS*FDDLLC
Trigger: ACAAAGCAAGTCATCAAAGCATGATTGGATGAATTC...TGTAACAAAGCAAGTCATCAAAGCATGATTGGATGAATTCAGGAAAGGAGACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CCA 90 bp GCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGAAACATTTAATTTCCTTCATCGTTATTTaGATCAACTGGTCATCATCA +
Preference number: 4 (lower is better)
Translates to: ASKCKGTQGIDSVWKHLISFIVI*INWSSS
Trigger: TGATGATGACCAGTTGATCCAAATAACGATGAAGGA...AATTAAATGTTTCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CCA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGACTTTACGGTTTTGGTaGTATATTCTGTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: YQMRFERGISKLRTLLKATLRFW*YILFKV
Trigger: GACCTTAAACAGAATATACCACCAAAACCGTAAAGT...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 90 bp GCCAGGAAGTTTCTGACAGCCTCAGCCTTGGAAAGGTTGTCAGGCTaGAGGTATTTCCTGGTGGACCGCCAGAGCTCCGAGAGAGAAGGA +
Preference number: 5 (lower is better)
Translates to: ARKFLTASALERLSG*RYFLVDRQSSEREG
Trigger: TCCTTCTCTCTCGGAGCTCTGGCGGTCCACCAGGAAATACCTGCAGCCTGACAACCTTTCCAAGGCTGAGGCTGTCAGAAACTTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 90 bp TCTCTGGAGAGCAGTGGTAGCCAGGTGGCTGATGGGCCCTTCTCCTaGTTCTGCATACTTCAGAAGACTTGGGATGCCTTCTGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SLESSGSQVADGPFS*FCILQKTWDAFWKQ
Trigger: CTGCTTCCAGAAGGCATCCCAAGTCTTCTGAAGTATGCAGAAGCAGGAGAAGGGCCCATCAGCCACCTGGCTACCACTGCTCTCCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CCA 90 bp GACCGCCAGAGCTCCGAGAGAGAAGGACATCCTTTACAGTGGCTCTaGAAGACCTGCCCCACAATGGGAATGGCCGTGTACTTTGAATCA +
Preference number: 5 (lower is better)
Translates to: DRQSSEREGHPLQWL*KTCPTMGMAVYFES
Trigger: TGATTCAAAGTACACGGCCATTCCCATTGTGGGGCAGGTCTTCCAGAGCCACTGTAAAGGATGTCCTTCTCTCTCGGAGCTCTGGCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGTAGCCCACGCTGTCTaGCAGTTTTCCTTTGCCCCG +
Preference number: 5 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGVAHAV*QFSFAP
Trigger: CGGGGCAAAGGAAAACTGCAAGACAGCGTGGGCTAC...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGCTGACAGCCTCAGCCTaGGAAAGGTTGTCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGLTASA*ERLSGC
Trigger: GCAGCCTGACAACCTTTCCAAGGCTGAGGCTGTCAG...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 90 bp CATCAGGATTCCTCCATAGTAAGGCCACATCCACGTTGGAGGAAATaGGGTAGCCCACGCTGTCTTGCAGTTTTCCTTTGCCCCGATCAA +
Preference number: 5 (lower is better)
Translates to: HQDSSIVRPHPRWRK*GSPRCLAVFLCPDQ
Trigger: TTGATCGGGGCAAAGGAAAACTGCAAGACAGCGTGGGCTACCGCATTTCCTCCAACGTGGATGTGGCCTTACTATGGAGGAATCCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265517.10
ENST00000422897.6
ENST00000457717.6
ENST00000505094.6
ENST00000511045.6
CDS GCA 90 bp ACCATCCGCTGGAAGTACTATCCGGCTGAGGGGCAAACACCACTTTaGACATCTCTGAGTTCTCTTGATGGAGCGGGAATTCACATCCTG +
Preference number: 5 (lower is better)
Translates to: TIRWKYYPAEGQTPL*TSLSSLDGAGIHIL
Trigger: CAGGATGTGAATTCCCGCTCCATCAAGAGAACTCAGAGATGTGCAAAGTGGTGTTTGCCCCTCAGCCGGATAGTACTTCCAGCGGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CCA 90 bp GTGGCTGATGGGCCCTTCTCCTGCTTCTGCATACTTCAGAAGACTTaGGATGCCTTCTGGAAGCAGGGCATTCTTCAAAGCCAGCAGATA +
Preference number: 5 (lower is better)
Translates to: VADGPFSCFCILQKT*DAFWKQGILQSQQI
Trigger: TATCTGCTGGCTTTGAAGAATGCCCTGCTTCCAGAAGGCATCCCAAGTCTTCTGAAGTATGCAGAAGCAGGAGAAGGGCCCATCAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 90 bp CCTGCCCCACAATGGGAATGGCCGTGTACTTTGAATCAACTGCTTTaGTTATGGCTGCAGCCTGCTTTCCAGACATCAATCTTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PAPQWEWPCTLNQLL*LWLQPAFQTSILGL
Trigger: CAGGCCCAAGATTGATGTCTGGAAAGCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAAAGTACACGGCCATTCCCATTGTGGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 90 bp GTGGCTCTGGAAGACCTGCCCCACAATGGGAATGGCCGTGTACTTTaGATCAACTGCTTTGATTATGGCTGCAGCCTGCTTTCCAGACAT +
Preference number: 5 (lower is better)
Translates to: VALEDLPHNGNGRVL*INCFDYGCSLLSRH
Trigger: ATGTCTGGAAAGCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAAAGTACACGGCCATTCCCATTGTGGGGCAGGTCTTCCAGAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 90 bp GTTGAAAAAGGTGACAGGTCTGAGCTGAACATCAAAGAGGATGGCTaGCATACCAGCATAGGAGTCAAGGTTCTCCTCCCCCTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: VEKGDRSELNIKEDG*HTSIGVKVLLPLVR
Trigger: CCTGACGAGGGGGAGGAGAACCTTGACTCCTATGCTGGTATGTCAGCCATCCTCTTTGATGTTCAGCTCAGACCTGTCACCTTTTTCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 90 bp AGCTCCGAGAGAGAAGGACATCCTTTACAGTGGCTCTGGAAGACCTaGCCCACAATGGGAATGGCCGTGTACTTTGAATCAACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: SSEREGHPLQWLWKT*PTMGMAVYFESTAL
Trigger: CAAAGCAGTTGATTCAAAGTACACGGCCATTCCCATTGTGGGGCAGGTCTTCCAGAGCCACTGTAAAGGATGTCCTTCTCTCTCGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CCA 90 bp CATCATCACCATCAGGATTCCTCCATAGTAAGGCCACATCCACGTTaGAGGAAATGCGGTAGCCCACGCTGTCTTGCAGTTTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: HHHHQDSSIVRPHPR*RKCGSPRCLAVFLC
Trigger: GCAAAGGAAAACTGCAAGACAGCGTGGGCTACCGCATTTCCTCCAACGTGGATGTGGCCTTACTATGGAGGAATCCTGATGGTGATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265517.10
ENST00000422897.6
ENST00000457717.6
ENST00000505094.6
ENST00000511045.6
CDS CCA 90 bp GTTATGAAAGGGAGATCATATCTCTGGAGAGCAGTGGTAGCCAGGTaGCTGATGGGCCCTTCTCCTGCTTCTGCATACTTCAGAAGACTT +
Preference number: 5 (lower is better)
Translates to: VMKGRSYLWRAVVAR*LMGPSPASAYFRRL
Trigger: AAGTCTTCTGAAGTATGCAGAAGCAGGAGAAGGGCCCATCAGCCACCTGGCTACCACTGCTCTCCAGAGATATGATCTCCCTTTCATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCCTGACAGCCTCAGCCTaGGAAAGGTTGTCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPLTASA*ERLSGC
Trigger: GCAGCCTGACAACCTTTCCAAGGCTGAGGCTGTCAG...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 90 bp ATGGCCGTGTACTTTGAATCAACTGCTTTGATTATGGCTGCAGCCTaGTTTCCAGACATCAATCTTGGGCCTGCTTCGGTTGTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: MAVYFESTALIMAAA*FPDINLGPASVVFS
Trigger: GCTGAAGACAACCGAAGCAGGCCCAAGATTGATGTCTGGAAAGCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAAAGTACACGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGTCTTGCAGTTTTCCTTaGCCCCGATCAAGAAGAACT +
Preference number: 5 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGSCSFP*PRSRRT
Trigger: AGTTCTTCTTGATCGGGGCAAAGGAAAACTGCAAGA...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATGTAGCCCACGCTGTCTaGCAGTTTTCCTTTGCCCCG +
Preference number: 5 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHVAHAV*QFSFAP
Trigger: CGGGGCAAAGGAAAACTGCAAGACAGCGTGGGCTAC...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 90 bp CTGTACTGGTTTCCAGGCCAGCTTTCACAAAAGAGGAGTCCACTGTaGTGTCAGTGGTTATTACCACAGTCACCCTATTTTTCACTCGGG +
Preference number: 5 (lower is better)
Translates to: LYWFPGQLSQKRSPL*CQWLLPQSPYFSLG
Trigger: CCCGAGTGAAAAATAGGGTGACTGTGGTAATAACCACTGACATCACAGTGGACTCCTCTTTTGTGAAAGCTGGCCTGGAAACCAGTACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTTCCAGACATCAATCTaGGGCCTGCTTCGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKFQTSI*GLLRLS
Trigger: AGACAACCGAAGCAGGCCCAAGATTGATGTCTGGAA...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTCAGCCTTGGAAAGGTaGTCAGGCTGCAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKSALER*SGCRYF
Trigger: GAAATACCTGCAGCCTGACAACCTTTCCAAGGCTGA...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTGCTTCCACTACTGCTTaGAGTTTGCAGCCTTCATTC +
Preference number: 5 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPASTTA*SLQPSF
Trigger: GAATGAAGGCTGCAAACTCAAAGCAGTAGTGGAAGC...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGGGGGCAAACACCACTTaGCACATCTCTGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKGANTT*HISEFS
Trigger: AGAGAACTCAGAGATGTGCAAAGTGGTGTTTGCCCC...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CCA 90 bp GACTACGTTCTATGTAGCCAGTGTAGGCAGAAGAAGATCCACTCCTaGAGAAACGGTCATAATTGTGAGCGACCATTTCCTTCAGAACTC +
Preference number: 5 (lower is better)
Translates to: DYVLCSQCRQKKIHS*RNGHNCERPFPSEL
Trigger: GAGTTCTGAAGGAAATGGTCGCTCACAATTATGACCGTTTCTCCAGGAGTGGATCTTCTTCTGCCTACACTGGCTACATAGAACGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTTGGGCCTGCTTCGGTaGTCTTCAGCTCTAATTTCT +
Preference number: 5 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKLGLLR*SSALIS
Trigger: AGAAATTAGAGCTGAAGACAACCGAAGCAGGCCCAA...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTTGAATCAACTGCTTaGATTATGGCTGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPFESTA*IMAAAC
Trigger: GCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAAA...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCTCAGCCTTGGAAAGGTaGTCAGGCTGCAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVSALER*SGCRYF
Trigger: GAAATACCTGCAGCCTGACAACCTTTCCAAGGCTGA...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGCATACTTCAGAAGACTaGGGATGCCTTCTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKHTSED*GCLLEA
Trigger: TGCTTCCAGAAGGCATCCCAAGTCTTCTGAAGTATG...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTAATGGAGCTTCATCCTaGTCCATCTGCATGCAAACT +
Preference number: 5 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPNGASS*SICMQT
Trigger: AGTTTGCATGCAGATGGACAAGGATGAAGCTCCATT...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCGGGGCAAACACCACTTaGCACATCTCTGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVGANTT*HISEFS
Trigger: AGAGAACTCAGAGATGTGCAAAGTGGTGTTTGCCCC...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATCTTAGTCATGCCACATaGTGTCCCTTTCGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHLSHAT*CPFRGD
Trigger: GTCTCCCCGAAAGGGACACAATGTGGCATGACTAAG...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGATAAGGACCTGTCATTaGTTTTGGGTTTATCACCAC +
Preference number: 5 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGIRTCH*FWVYHH
Trigger: GTGGTGATAAACCCAAAACAAATGACAGGTCCTTAT...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS TCA 90 bp GCAGTTTTCCTTTGCCCCGATCAAGAAGAACTTCAGTGGAGTACGTaGGCTTGTACAGCCGGTCATTATTTAATGAGAGACCAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: AVFLCPDQEELQWST*ACTAGHYLMRDQLC
Trigger: ACACAACTGGTCTCTCATTAAATAATGACCGGCTGTACAAGCTCACGTACTCCACTGAAGTTCTTCTTGATCGGGGCAAAGGAAAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265517.10
ENST00000422897.6
ENST00000457717.6
ENST00000505094.6
ENST00000511045.6
CDS GCA 90 bp GAATGGGTACTGAGAAAACTGCACTGTGGAGATAAACTCCAAGCCTaGTTCTGTTTCTGTACTGGTTTCCAGGCCAGCTTTCACAAAAGA +
Preference number: 5 (lower is better)
Translates to: EWVLRKLHCGDKLQA*FCFCTGFQASFHKR
Trigger: TCTTTTGTGAAAGCTGGCCTGGAAACCAGTACAGAAACAGAAGCAGGCTTGGAGTTTATCTCCACAGTGCAGTTTTCTCAGTACCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAGTAGCCCACGCTGTCTaGCAGTTTTCCTTTGCCCCG +
Preference number: 5 (lower is better)
Translates to: ERGISKLRTLLKASHDDSVAHAV*QFSFAP
Trigger: CGGGGCAAAGGAAAACTGCAAGACAGCGTGGGCTAC...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCAAGGAGCGTAGGTCTTaGCAGAGCTTCCAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVKERRS*QSFQVF
Trigger: GAAAACTTGGAAGCTCTGCAAAGACCTACGCTCCTT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGCTAGCCAGACCTCTCTaGATATTTTCTATGGCCACT +
Preference number: 5 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKLARPL*IFSMAT
Trigger: AGTGGCCATAGAAAATATCAAGAGAGGTCTGGCTAG...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCCCAGACCTCGCTATTTaGCATGAATCCAAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPPDLAI*HESKAL
Trigger: TAAGGCCTTGGATTCATGCAAAATAGCGAGGTCTGG...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGAAATTCAGTCCAAAATaGTGTGTTTCTTCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: AVLSESKYLVMPHCVPFGKFSPK*CVSSAS
Trigger: GCTTGCTGAAGAAACACACAATTTTGGACTGAATTT...CCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCTTGGGCCTGCTTCGGTaGTCTTCAGCTCTAATTTCT +
Preference number: 5 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVLGLLR*SSALIS
Trigger: AGAAATTAGAGCTGAAGACAACCGAAGCAGGCCCAA...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCATTCCAGACATCAATCTaGGGCCTGCTTCGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPFQTSI*GLLRLS
Trigger: AGACAACCGAAGCAGGCCCAAGATTGATGTCTGGAA...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTTTGAATCAACTGCTTaGATTATGGCTGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKFESTA*IMAAAC
Trigger: GCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAAA...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCCTGACAGCCTCAGCCTaGGAAAGGTTGTCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVLTASA*ERLSGC
Trigger: GCAGCCTGACAACCTTTCCAAGGCTGAGGCTGTCAG...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCATACTTCAGAAGACTaGGGATGCCTTCTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVHTSED*GCLLEA
Trigger: TGCTTCCAGAAGGCATCCCAAGTCTTCTGAAGTATG...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTAAATCACTGTATCCGTaGAAAAAGGTGACAGGTCTG +
Preference number: 5 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPKSLYP*KKVTGL
Trigger: CAGACCTGTCACCTTTTTCAACGGATACAGTGATTT...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTGACCTGTCATTTGTTTaGGGTTTATCACCACATCTG +
Preference number: 5 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPDLSFV*GLSPHL
Trigger: CAGATGTGGTGATAAACCCAAAACAAATGACAGGTC...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS TCA 90 bp CCAGAGATATCTACCTCATTGGTGGTTCCAGAGCTTAACTGTGTCTaGAATAGGCTAGCCAGACCTCTCTTGATATTTTCTATGGCCACT +
Preference number: 5 (lower is better)
Translates to: PEISTSLVVPELNCV*NRLARPLLIFSMAT
Trigger: AGTGGCCATAGAAAATATCAAGAGAGGTCTGGCTAGCCTATTTCAGACACAGTTAAGCTCTGGAACCACCAATGAGGTAGATATCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 90 bp AAAGTTGTGGAATCTAAACGCCCCTTTACCTTTCCATGGATTAGATaGAGGAGCGTAGGTCTTTGCAGAGCTTCCAAGTTTTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: KVVESKRPFTFPWIR*RSVGLCRASKFSFP
Trigger: GGGAAAGGAAAACTTGGAAGCTCTGCAAAGACCTACGCTCCTTCATCTAATCCATGGAAAGGTAAAGGGGCGTTTAGATTCCACAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CAA 90 bp TCATTTCAGTCTCATAATTTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGGTAGCCCACGCTGTCTaGCAGTTTTCCTTTGCCCCG +
Preference number: 5 (lower is better)
Translates to: SFQSHNLSPFLNSSNHALVAHAV*QFSFAP
Trigger: CGGGGCAAAGGAAAACTGCAAGACAGCGTGGGCTAC...CAAAGCATGATTGGATGAATTCAGGAAAGGAGACAAATTATGAGACTGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CAA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATAAGGAGCGTAGGTCTTaGCAGAGCTTCCAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHKERRS*QSFQVF
Trigger: GAAAACTTGGAAGCTCTGCAAAGACCTACGCTCCTT...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAAAGGAGCGTAGGTCTTaGCAGAGCTTCCAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPKERRS*QSFQVF
Trigger: GAAAACTTGGAAGCTCTGCAAAGACCTACGCTCCTT...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATGCTTCCACTACTGCTTaGAGTTTGCAGCCTTCATTC +
Preference number: 5 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHASTTA*SLQPSF
Trigger: GAATGAAGGCTGCAAACTCAAAGCAGTAGTGGAAGC...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTGATGCTGACAGCATTTaGGACATCAAATCACTGTAT +
Preference number: 5 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPDADSI*DIKSLY
Trigger: ATACAGTGATTTGATGTCCAAAATGCTGTCAGCATC...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCCCCTGGACCTCTATATaGGCTTTTAGTCCAGATTGT +
Preference number: 5 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPPWTSI*AFSPDC
Trigger: ACAATCTGGACTAAAAGCCAATATAGAGGTCCAGGG...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATACTTAGTCATGCCACATaGTGTCCCTTTCGGGGAGAC +
Preference number: 5 (lower is better)
Translates to: YLVMPHCVPFGETNSSKILSHAT*CPFRGD
Trigger: GTCTCCCCGAAAGGGACACAATGTGGCATGACTAAG...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTGTGGAGTACGTGAGCTaGTACAGCCGGTCATTATTT +
Preference number: 5 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFVEYVS*YSRSLF
Trigger: AAATAATGACCGGCTGTACAAGCTCACGTACTCCAC...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTCTTGCAGTTTTCCTTaGCCCCGATCAAGAAGAACT +
Preference number: 5 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHSCSFP*PRSRRT
Trigger: AGTTCTTCTTGATCGGGGCAAAGGAAAACTGCAAGA...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGATCCTTCATCGTTATTaGGATCAACTGGTCATCATC +
Preference number: 5 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKILHRY*DQLVII
Trigger: GATGATGACCAGTTGATCCAAATAACGATGAAGGAT...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTCATACTTCAGAAGACTaGGGATGCCTTCTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFHTSED*GCLLEA
Trigger: TGCTTCCAGAAGGCATCCCAAGTCTTCTGAAGTATG...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGCAAGTACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGGATGCTGACAGCATTTaGGACATCAAATCACTGTAT +
Preference number: 5 (lower is better)
Translates to: EQVLSHATLCPFRGDKFKDADSI*DIKSLY
Trigger: ATACAGTGATTTGATGTCCAAAATGCTGTCAGCATC...CTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTACTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTAAACTAAGAACGTTGTaGAAAGCGTCACATGATGAT +
Preference number: 5 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPKLRTL*KASHDD
Trigger: ATCATCATGTGACGCTTTCAACAACGTTCTTAGTTT...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCCCTAGTAAACTAAGAACGTaGTTGAAAGCGTCACATGAT +
Preference number: 5 (lower is better)
Translates to: VNAVLSESKYLVMPHCVPSKLRT*LKASHD
Trigger: ATCATGTGACGCTTTCAACAACGTTCTTAGTTTACT...AGGGACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAGCAAGAAGAATCATATaGACCAGCAATCCTCAACTG +
Preference number: 5 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPARRII*TSNPQL
Trigger: CAGTTGAGGATTGCTGGTCAATATGATTCTTCTTGC...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265517.10
ENST00000457717.6
CDS-3UTR CAA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATACCAGACCTCGCTATTTaGCATGAATCCAAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIPDLAI*HESKAL
Trigger: TAAGGCCTTGGATTCATGCAAAATAGCGAGGTCTGG...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATATTGGGCCTGCTTCGGTaGTCTTCAGCTCTAATTTCT +
Preference number: 5 (lower is better)
Translates to: YLVMPHCVPFGETNSSKILGLLR*SSALIS
Trigger: AGAAATTAGAGCTGAAGACAACCGAAGCAGGCCCAA...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTTTTGAATCAACTGCTTaGATTATGGCTGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFFESTA*IMAAAC
Trigger: GCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAAA...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTCCCTGGACCTCTATATaGGCTTTTAGTCCAGATTGT +
Preference number: 5 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFPWTSI*AFSPDC
Trigger: ACAATCTGGACTAAAAGCCAATATAGAGGTCCAGGG...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTAATGGAGCTTCATCCTaGTCCATCTGCATGCAAACT +
Preference number: 5 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFNGASS*SICMQT
Trigger: AGTTTGCATGCAGATGGACAAGGATGAAGCTCCATT...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp AAGCGTCACATGATGATTCAAAATGACGCTGTGGGTAGCATACTGCATATACCCGTACTTTTTCTCAAATaGCCTGAATGGAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: KRHMMIQNDAVGSILHIPVLFLK*PEWSFI
Trigger: GATGAAGCTCCATTCAGGCAATTTGAGAAAAAGTAC...GGGTATATGCAGTATGCTACCCACAGCGTCATTTTGAATCATCATGTGACGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCGTACTTTTTCTCAAATaGCCTGAATGGAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVVLFLK*PEWSFI
Trigger: GATGAAGCTCCATTCAGGCAATTTGAGAAAAAGTAC...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGATGACTTGCTTTGTTACAGTGGAGTACGTGAGCTaGTACAGCCGGTCATTATTT +
Preference number: 5 (lower is better)
Translates to: LSPFLNSSNHALMTCFVTVEYVS*YSRSLF
Trigger: AAATAATGACCGGCTGTACAAGCTCACGTACTCCAC...TGTAACAAAGCAAGTCATCAAAGCATGATTGGATGAATTCAGGAAAGGAGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CAA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAATCCTTCATCGTTATTaGGATCAACTGGTCATCATC +
Preference number: 5 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPILHRY*DQLVII
Trigger: GATGATGACCAGTTGATCCAAATAACGATGAAGGAT...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTTCCAGACATCAATCTaGGGCCTGCTTCGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: YQMRFERGISKLRTLLKAFQTSI*GLLRLS
Trigger: AGACAACCGAAGCAGGCCCAAGATTGATGTCTGGAA...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCAGCCTTGGAAAGGTaGTCAGGCTGCAGGTATTTC +
Preference number: 5 (lower is better)
Translates to: YQMRFERGISKLRTLLKASALER*SGCRYF
Trigger: GAAATACCTGCAGCCTGACAACCTTTCCAAGGCTGA...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TGTCTGTGTTTAGTGGAAAATAAGGACCTGTCATTTGTTTTGGGTTTATCACCAGCTTCCACTACTGCTTaGAGTTTGCAGCCTTCATTC +
Preference number: 5 (lower is better)
Translates to: CLCLVENKDLSFVLGLSPASTTA*SLQPSF
Trigger: GAATGAAGGCTGCAAACTCAAAGCAGTAGTGGAAGC...TGGTGATAAACCCAAAACAAATGACAGGTCCTTATTTTCCACTAAACACAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR CAA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTAAATCACTGTATCCGTaGAAAAAGGTGACAGGTCTG +
Preference number: 5 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFKSLYP*KKVTGL
Trigger: CAGACCTGTCACCTTTTTCAACGGATACAGTGATTT...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp ACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCAGATGCTGACAGCATTTaGGACATCAAATCACTGTAT +
Preference number: 5 (lower is better)
Translates to: TGKYVNAVLSESKYLVMPDADSI*DIKSLY
Trigger: ATACAGTGATTTGATGTCCAAAATGCTGTCAGCATC...TGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATTGTGTCAGTAAACTAAGAACGTaGTTGAAAGCGTCACATGAT +
Preference number: 5 (lower is better)
Translates to: YVNAVLSESKYLVMPHCVSKLRT*LKASHD
Trigger: ATCATGTGACGCTTTCAACAACGTTCTTAGTTTACT...GACACAATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCATCTTGCAGTTTTCCTTaGCCCCGATCAAGAAGAACT +
Preference number: 5 (lower is better)
Translates to: ERGISKLRTLLKASHDDSSCSFP*PRSRRT
Trigger: AGTTCTTCTTGATCGGGGCAAAGGAAAACTGCAAGA...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TCATTTCAGTCTCATAATTTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGAAGGAGCGTAGGTCTTaGCAGAGCTTCCAAGTTTTC +
Preference number: 5 (lower is better)
Translates to: SFQSHNLSPFLNSSNHALKERRS*QSFQVF
Trigger: GAAAACTTGGAAGCTCTGCAAAGACCTACGCTCCTT...CAAAGCATGATTGGATGAATTCAGGAAAGGAGACAAATTATGAGACTGAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CAA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCCTAGCCAGACCTCTCTaGATATTTTCTATGGCCACT +
Preference number: 5 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVLARPL*IFSMAT
Trigger: AGTGGCCATAGAAAATATCAAGAGAGGTCTGGCTAG...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGCCAGACCTCGCTATTTaGCATGAATCCAAGGCCTTA +
Preference number: 5 (lower is better)
Translates to: YQMRFERGISKLRTLLKAPDLAI*HESKAL
Trigger: TAAGGCCTTGGATTCATGCAAAATAGCGAGGTCTGG...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp ATGACGCTGTGGGTAGCATACTGCATATACCCAAATTTGATCAAACTGCAGTTTGTATTTATTCATTTCTaGGGGAAGCTCCCCAATAGA +
Preference number: 5 (lower is better)
Translates to: MTLWVAYCIYPNLIKLQFVFIHF*GKLPNR
Trigger: TCTATTGGGGAGCTTCCCCAAGAAATGAATAAATAC...AAACTGCAGTTTGATCAAATTTGGGTATATGCAGTATGCTACCCACAGCGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATAGACGGACAATTTTGCTaGCAGGCATTTCAAAACGTA +
Preference number: 5 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIDGQFC*QAFQNV
Trigger: TACGTTTTGAAATGCCTGCAAGCAAAATTGTCCGTC...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCACCCTGGACCTCTATATaGGCTTTTAGTCCAGATTGT +
Preference number: 5 (lower is better)
Translates to: ERGISKLRTLLKASHDDSPWTSI*AFSPDC
Trigger: ACAATCTGGACTAAAAGCCAATATAGAGGTCCAGGG...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCAATGGAGCTTCATCCTaGTCCATCTGCATGCAAACT +
Preference number: 5 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVNGASS*SICMQT
Trigger: AGTTTGCATGCAGATGGACAAGGATGAAGCTCCATT...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCATGCCACATAAACTAAGAACGTTGTaGAAAGCGTCACATGATGAT +
Preference number: 5 (lower is better)
Translates to: GKYVNAVLSESKYLVMPHKLRTL*KASHDD
Trigger: ATCATCATGTGACGCTTTCAACAACGTTCTTAGTTT...ATGTGGCATGACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TGTCTGTGTTTAGTGGAAAATAAGGACCTGTCATTTGTTTTGGGTTTATCACCAGCAAGAAGAATCATATaGACCAGCAATCCTCAACTG +
Preference number: 5 (lower is better)
Translates to: CLCLVENKDLSFVLGLSPARRII*TSNPQL
Trigger: CAGTTGAGGATTGCTGGTCAATATGATTCTTCTTGC...TGGTGATAAACCCAAAACAAATGACAGGTCCTTATTTTCCACTAAACACAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR CAA 90 bp GCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGAAACATTTAATTTCTTGCAGTTTTCCTTaGCCCCGATCAAGAAGAACT +
Preference number: 5 (lower is better)
Translates to: ASKCKGTQGIDSVWKHLISCSFP*PRSRRT
Trigger: AGTTCTTCTTGATCGGGGCAAAGGAAAACTGCAAGA...AATTAAATGTTTCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CAA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGCTAGCCAGACCTCTCTaGATATTTTCTATGGCCACT +
Preference number: 5 (lower is better)
Translates to: YQMRFERGISKLRTLLKALARPL*IFSMAT
Trigger: AGTGGCCATAGAAAATATCAAGAGAGGTCTGGCTAG...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TGTCTGTGTTTAGTGGAAAATAAGGACCTGTCATTTGTTTTGGGTTTATCACCAGACGGACAATTTTGCTaGCAGGCATTTCAAAACGTA +
Preference number: 5 (lower is better)
Translates to: CLCLVENKDLSFVLGLSPDGQFC*QAFQNV
Trigger: TACGTTTTGAAATGCCTGCAAGCAAAATTGTCCGTC...TGGTGATAAACCCAAAACAAATGACAGGTCCTTATTTTCCACTAAACACAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR CAA 90 bp TGTCTGTGTTTAGTGGAAAATAAGGACCTGTCATTTGTTTTGGGTTTATCACCAAAATCACTGTATCCGTaGAAAAAGGTGACAGGTCTG +
Preference number: 5 (lower is better)
Translates to: CLCLVENKDLSFVLGLSPKSLYP*KKVTGL
Trigger: CAGACCTGTCACCTTTTTCAACGGATACAGTGATTT...TGGTGATAAACCCAAAACAAATGACAGGTCCTTATTTTCCACTAAACACAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR CAA 90 bp TTTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGATGACTTGCTTTGTTACAAGTTGGAGAAAAAGTaGTGGAATCTAAACGCCCCT +
Preference number: 5 (lower is better)
Translates to: FVSFPEFIQSCFDDLLCYKLEKK*WNLNAP
Trigger: AGGGGCGTTTAGATTCCACAACTTTTTCTCCAACTT...GTAACAAAGCAAGTCATCAAAGCATGATTGGATGAATTCAGGAAAGGAGACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CAA 90 bp TCATTTCAGTCTCATAATTTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGGCAAGAAGAATCATATaGACCAGCAATCCTCAACTG +
Preference number: 5 (lower is better)
Translates to: SFQSHNLSPFLNSSNHALARRII*TSNPQL
Trigger: CAGTTGAGGATTGCTGGTCAATATGATTCTTCTTGC...CAAAGCATGATTGGATGAATTCAGGAAAGGAGACAAATTATGAGACTGAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CAA 90 bp TACTTAGTCATGCCACATTGTGTCCCTTTCGGGGAGACAAATTCAAGTAAAATAAAATTCAGTCCAAAATaGTGTGTTTCTTCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: YLVMPHCVPFGETNSSKIKFSPK*CVSSAS
Trigger: GCTTGCTGAAGAAACACACAATTTTGGACTGAATTT...TATTTTACTTGAATTTGTCTCCCCGAAAGGGACACAATGTGGCATGACTAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAGTATTTATTCATTTCTaGGGGAAGCTCCCCAATAGA +
Preference number: 5 (lower is better)
Translates to: ERGISKLRTLLKASHDDSVFIHF*GKLPNR
Trigger: TCTATTGGGGAGCTTCCCCAAGAAATGAATAAATAC...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCGTACTTTTTCTCAAATaGCCTGAATGGAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVVLFLK*PEWSFI
Trigger: GATGAAGCTCCATTCAGGCAATTTGAGAAAAAGTAC...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp GCTAGTAAATGTAAGGGAACTCAGGGCATTGATTCAGTTTGGAAACATTTAATTATCCTTCATCGTTATTaGGATCAACTGGTCATCATC +
Preference number: 5 (lower is better)
Translates to: ASKCKGTQGIDSVWKHLIILHRY*DQLVII
Trigger: GATGATGACCAGTTGATCCAAATAACGATGAAGGAT...AATTAAATGTTTCCAAACTGAATCAATGCCCTGAGTTCCCTTACATTTACTAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CAA 90 bp GAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGTCACATGATGATTCAAAATTCAGTCCAAAATaGTGTGTTTCTTCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: ERGISKLRTLLKASHDDSKFSPK*CVSSAS
Trigger: GCTTGCTGAAGAAACACACAATTTTGGACTGAATTT...TGAATCATCATGTGACGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCAAACTAAGAACGTTGTaGAAAGCGTCACATGATGAT +
Preference number: 5 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVKLRTL*KASHDD
Trigger: ATCATCATGTGACGCTTTCAACAACGTTCTTAGTTT...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS-3UTR CAA 90 bp TTAAATACAGGTAAATATGTAAACGCTGTGCTCTCAGAGAGCAAGTACTTAGTCAAATCCACCAGTTTCTaGAAGCAATGTTCTCTTAGT +
Preference number: 5 (lower is better)
Translates to: LNTGKYVNAVLSESKYLVKSTSF*KQCSLS
Trigger: ACTAAGAGAACATTGCTTCAAGAAACTGGTGGATTT...GACTAAGTACTTGCTCTCTGAGAGCACAGCGTTTACATATTTACCTGTATTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265517.10
CDS-3UTR CAA 90 bp TTGTCTCCTTTCCTGAATTCATCCAATCATGCTTTGATGACTTGCTTTGTTACATCATCCAATCATGCTTaGATGACTTGCTTTGTTACA +
Preference number: 5 (lower is better)
Translates to: LSPFLNSSNHALMTCFVTSSNHA*MTCFVT
Trigger: TGTAACAAAGCAAGTCATCAAAGCATGATTGGATGA...TGTAACAAAGCAAGTCATCAAAGCATGATTGGATGAATTCAGGAAAGGAGACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS-3UTR CAA 90 bp TACCAAATGAGATTTGAGAGAGGTATAAGTAAACTAAGAACGTTGTTGAAAGCGAGTAAACTAAGAACGTaGTTGAAAGCGTCACATGAT +
Preference number: 5 (lower is better)
Translates to: YQMRFERGISKLRTLLKASKLRT*LKASHD
Trigger: ATCATGTGACGCTTTCAACAACGTTCTTAGTTTACT...CGCTTTCAACAACGTTCTTAGTTTACTTATACCTCTCTCAAATCTCATTTGGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CCA 72 bp CGCCAGAGCTCCGAGAGAGAAGGACATCCTTTACAGTaGCTCTGGAAGACCTGCCCCACAATGGGAATGGCC +
Preference number: 6 (lower is better)
Translates to: RQSSEREGHPLQ*LWKTCPTMGMA
Trigger: GGCCATTCCCATTGTGGGGCAGGTCTTCCAGAGCCACTGTAAAGGATGTCCTTCTCTCTCGGAGCTCTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 72 bp TTTCTGACAGCCTCAGCCTTGGAAAGGTTGTCAGGCTaGAGGTATTTCCTGGTGGACCGCCAGAGCTCCGAG +
Preference number: 6 (lower is better)
Translates to: FLTASALERLSG*RYFLVDRQSSE
Trigger: CTCGGAGCTCTGGCGGTCCACCAGGAAATACCTGCAGCCTGACAACCTTTCCAAGGCTGAGGCTGTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CCA 72 bp CAGCCTTGGAAAGGTTGTCAGGCTGCAGGTATTTCCTaGTGGACCGCCAGAGCTCCGAGAGAGAAGGACATC +
Preference number: 6 (lower is better)
Translates to: QPWKGCQAAGIS*WTARAPREKDI
Trigger: GATGTCCTTCTCTCTCGGAGCTCTGGCGGTCCACCAGGAAATACCTGCAGCCTGACAACCTTTCCAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CAA 72 bp GCCAGGAAGTTTCTGACAGCCTCAGCCTTGGAAAGGTaGTCAGGCTGCAGGTATTTCCTGGTGGACCGCCAG +
Preference number: 6 (lower is better)
Translates to: ARKFLTASALER*SGCRYFLVDRQ
Trigger: CTGGCGGTCCACCAGGAAATACCTGCAGCCTGACAACCTTTCCAAGGCTGAGGCTGTCAGAAACTTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 72 bp AGCAGTGGTAGCCAGGTGGCTGATGGGCCCTTCTCCTaGTTCTGCATACTTCAGAAGACTTGGGATGCCTTC +
Preference number: 6 (lower is better)
Translates to: SSGSQVADGPFS*FCILQKTWDAF
Trigger: GAAGGCATCCCAAGTCTTCTGAAGTATGCAGAAGCAGGAGAAGGGCCCATCAGCCACCTGGCTACCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp GGTGACAGGTCTGAGCTGAACATCAAAGAGGATGGCTaGCATACCAGCATAGGAGTCAAGGTTCTCCTCCCC +
Preference number: 6 (lower is better)
Translates to: GDRSELNIKEDG*HTSIGVKVLLP
Trigger: GGGGAGGAGAACCTTGACTCCTATGCTGGTATGTCAGCCATCCTCTTTGATGTTCAGCTCAGACCTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp ATCCGGCTGAGGGGCAAACACCACTTTGCACATCTCTaGGTTCTCTTGATGGAGCGGGAATTCACATCCTGC +
Preference number: 6 (lower is better)
Translates to: IRLRGKHHFAHL*VLLMEREFTSC
Trigger: GCAGGATGTGAATTCCCGCTCCATCAAGAGAACTCAGAGATGTGCAAAGTGGTGTTTGCCCCTCAGCCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 72 bp TCCTCCATAGTAAGGCCACATCCACGTTGGAGGAAATaGGGTAGCCCACGCTGTCTTGCAGTTTTCCTTTGC +
Preference number: 6 (lower is better)
Translates to: SSIVRPHPRWRK*GSPRCLAVFLC
Trigger: GCAAAGGAAAACTGCAAGACAGCGTGGGCTACCGCATTTCCTCCAACGTGGATGTGGCCTTACTATGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265517.10
ENST00000422897.6
ENST00000457717.6
ENST00000505094.6
ENST00000511045.6
CDS CCA 72 bp CATCAGGATTCCTCCATAGTAAGGCCACATCCACGTTaGAGGAAATGCGGTAGCCCACGCTGTCTTGCAGTT +
Preference number: 6 (lower is better)
Translates to: HQDSSIVRPHPR*RKCGSPRCLAV
Trigger: AACTGCAAGACAGCGTGGGCTACCGCATTTCCTCCAACGTGGATGTGGCCTTACTATGGAGGAATCCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265517.10
ENST00000422897.6
ENST00000457717.6
ENST00000505094.6
ENST00000511045.6
CDS CAA 72 bp ATCCACGTTGGAGGAAATGCGGTAGCCCACGCTGTCTaGCAGTTTTCCTTTGCCCCGATCAAGAAGAACTTC +
Preference number: 6 (lower is better)
Translates to: IHVGGNAVAHAV*QFSFAPIKKNF
Trigger: GAAGTTCTTCTTGATCGGGGCAAAGGAAAACTGCAAGACAGCGTGGGCTACCGCATTTCCTCCAACGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265517.10
ENST00000422897.6
ENST00000457717.6
ENST00000505094.6
ENST00000511045.6
CDS CAA 90 bp ACCTGCCCCACAATGGGAATGGCCGTGTACTTTGAATCAACTGCTTaGATTATGGCTGCAGCCTGCTTTCCAGACATCAATCTTGGGCCT +
Preference number: 6 (lower is better)
Translates to: TCPTMGMAVYFESTA*IMAAACFPDINLGP
Trigger: AGGCCCAAGATTGATGTCTGGAAAGCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAAAGTACACGGCCATTCCCATTGTGGGGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp GAAGACCTGCCCCACAATGGGAATGGCCGTGTACTTTaGATCAACTGCTTTGATTATGGCTGCAGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: EDLPHNGNGRVL*INCFDYGCSLL
Trigger: AAGCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAAAGTACACGGCCATTCCCATTGTGGGGCAGGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp CAGTTTCAAAACCATCCGCTGGAAGTACTATCCGGCTaGGGGGCAAACACCACTTTGCACATCTCTGAGTTC +
Preference number: 6 (lower is better)
Translates to: QFQNHPLEVLSG*GANTTLHISEF
Trigger: GAACTCAGAGATGTGCAAAGTGGTGTTTGCCCCTCAGCCGGATAGTACTTCCAGCGGATGGTTTTGAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 72 bp AGAGAAGGACATCCTTTACAGTGGCTCTGGAAGACCTaGCCCACAATGGGAATGGCCGTGTACTTTGAATCA +
Preference number: 6 (lower is better)
Translates to: REGHPLQWLWKT*PTMGMAVYFES
Trigger: TGATTCAAAGTACACGGCCATTCCCATTGTGGGGCAGGTCTTCCAGAGCCACTGTAAAGGATGTCCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 72 bp CTTCTCCTGCTTCTGCATACTTCAGAAGACTTGGGATaGCTTCTGGAAGCAGGGCATTCTTCAAAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: LLLLLHTSEDLG*LLEAGHSSKPA
Trigger: TGCTGGCTTTGAAGAATGCCCTGCTTCCAGAAGGCATCCCAAGTCTTCTGAAGTATGCAGAAGCAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 72 bp TGGAAGTACTATCCGGCTGAGGGGCAAACACCACTTTaGACATCTCTGAGTTCTCTTGATGGAGCGGGAATT +
Preference number: 6 (lower is better)
Translates to: WKYYPAEGQTPL*TSLSSLDGAGI
Trigger: AATTCCCGCTCCATCAAGAGAACTCAGAGATGTGCAAAGTGGTGTTTGCCCCTCAGCCGGATAGTACTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp AGAAGTGGACTCTTTCAATGGCAGCCAGTGAGGGAGTaGCCCTCTTCAGAACCTTTTCTAGCTTCTAGAAGC +
Preference number: 6 (lower is better)
Translates to: RSGLFQWQPVRE*PSSEPFLASRS
Trigger: GCTTCTAGAAGCTAGAAAAGGTTCTGAAGAGGGTCACTCCCTCACTGGCTGCCATTGAAAGAGTCCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511610.6
CDS CAA 90 bp AGTCCTTTCACCACACTGATAGGGTCGCCAGATGCTGACAGCATTTaGGACATCAAATCACTGTATCCGTTGAAAAAGGTGACAGGTCTG +
Preference number: 6 (lower is better)
Translates to: SPFTTLIGSPDADSI*DIKSLYPLKKVTGL
Trigger: CAGACCTGTCACCTTTTTCAACGGATACAGTGATTTGATGTCCAAAATGCTGTCAGCATCTGGCGACCCTATCAGTGTGGTGAAAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 72 bp CTGAGAAAACTGCACTGTGGAGATAAACTCCAAGCCTaGTTCTGTTTCTGTACTGGTTTCCAGGCCAGCTTT +
Preference number: 6 (lower is better)
Translates to: LRKLHCGDKLQA*FCFCTGFQASF
Trigger: AAAGCTGGCCTGGAAACCAGTACAGAAACAGAAGCAGGCTTGGAGTTTATCTCCACAGTGCAGTTTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CCA 72 bp CTATGTAGCCAGTGTAGGCAGAAGAAGATCCACTCCTaGAGAAACGGTCATAATTGTGAGCGACCATTTCCT +
Preference number: 6 (lower is better)
Translates to: LCSQCRQKKIHS*RNGHNCERPFP
Trigger: AGGAAATGGTCGCTCACAATTATGACCGTTTCTCCAGGAGTGGATCTTCTTCTGCCTACACTGGCTACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp CTTTGCCCCGATCAAGAAGAACTTCAGTGGAGTACGTaGGCTTGTACAGCCGGTCATTATTTAATGAGAGAC +
Preference number: 6 (lower is better)
Translates to: LCPDQEELQWST*ACTAGHYLMRD
Trigger: GTCTCTCATTAAATAATGACCGGCTGTACAAGCTCACGTACTCCACTGAAGTTCTTCTTGATCGGGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265517.10
ENST00000422897.6
ENST00000457717.6
ENST00000505094.6
ENST00000511045.6
CDS TCA 72 bp CAATGGGAATGGCCGTGTACTTTGAATCAACTGCTTTaGTTATGGCTGCAGCCTGCTTTCCAGACATCAATC +
Preference number: 6 (lower is better)
Translates to: QWEWPCTLNQLL*LWLQPAFQTSI
Trigger: GATTGATGTCTGGAAAGCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAAAGTACACGGCCATTCCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp AAGTCCTTTCACCACACTGATAGGGTCGCCAGATGCTaGCAGCATTTTGGACATCAAATCACTGTATCCGTT +
Preference number: 6 (lower is better)
Translates to: KSFHHTDRVARC*QHFGHQITVSV
Trigger: AACGGATACAGTGATTTGATGTCCAAAATGCTGTCAGCATCTGGCGACCCTATCAGTGTGGTGAAAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CAA 72 bp CCCCGATCAAGAAGAACTTCAGTGGAGTACGTGAGCTaGTACAGCCGGTCATTATTTAATGAGAGACCAGTT +
Preference number: 6 (lower is better)
Translates to: PRSRRTSVEYVS*YSRSLFNERPV
Trigger: AACTGGTCTCTCATTAAATAATGACCGGCTGTACAAGCTCACGTACTCCACTGAAGTTCTTCTTGATCGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265517.10
ENST00000422897.6
ENST00000457717.6
ENST00000505094.6
ENST00000511045.6
CDS CAA 72 bp ACCACACTGATAGGGTCGCCAGATGCTGACAGCATTTaGGACATCAAATCACTGTATCCGTTGAAAAAGGTG +
Preference number: 6 (lower is better)
Translates to: TTLIGSPDADSI*DIKSLYPLKKV
Trigger: CACCTTTTTCAACGGATACAGTGATTTGATGTCCAAAATGCTGTCAGCATCTGGCGACCCTATCAGTGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp TTTCCAGGCCAGCTTTCACAAAAGAGGAGTCCACTGTaGTGTCAGTGGTTATTACCACAGTCACCCTATTTT +
Preference number: 6 (lower is better)
Translates to: FPGQLSQKRSPL*CQWLLPQSPYF
Trigger: AAAATAGGGTGACTGTGGTAATAACCACTGACATCACAGTGGACTCCTCTTTTGTGAAAGCTGGCCTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp GAATCTAAACGCCCCTTTACCTTTCCATGGATTAGATaGAGGAGCGTAGGTCTTTGCAGAGCTTCCAAGTTT +
Preference number: 6 (lower is better)
Translates to: ESKRPFTFPWIR*RSVGLCRASKF
Trigger: AAACTTGGAAGCTCTGCAAAGACCTACGCTCCTTCATCTAATCCATGGAAAGGTAAAGGGGCGTTTAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422897.6
CDS CAA 72 bp CCTGCTTTCCAGACATCAATCTTGGGCCTGCTTCGGTaGTCTTCAGCTCTAATTTCTGCTTCGATACTATTT +
Preference number: 6 (lower is better)
Translates to: PAFQTSILGLLR*SSALISASILF
Trigger: AAATAGTATCGAAGCAGAAATTAGAGCTGAAGACAACCGAAGCAGGCCCAAGATTGATGTCTGGAAAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CAA 72 bp ACAATGGGAATGGCCGTGTACTTTGAATCAACTGCTTaGATTATGGCTGCAGCCTGCTTTCCAGACATCAAT +
Preference number: 6 (lower is better)
Translates to: TMGMAVYFESTA*IMAAACFPDIN
Trigger: ATTGATGTCTGGAAAGCAGGCTGCAGCCATAATCAAAGCAGTTGATTCAAAGTACACGGCCATTCCCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp TCTACCTCATTGGTGGTTCCAGAGCTTAACTGTGTCTaGAATAGGCTAGCCAGACCTCTCTTGATATTTTCT +
Preference number: 6 (lower is better)
Translates to: STSLVVPELNCV*NRLARPLLIFS
Trigger: AGAAAATATCAAGAGAGGTCTGGCTAGCCTATTTCAGACACAGTTAAGCTCTGGAACCACCAATGAGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp GTCTTCTATCTTATAGGTGGTGACAGATGTAGCTTTTaGACTGACACCCAAGACCTGATTTGGGGTCGTAAA +
Preference number: 6 (lower is better)
Translates to: VFYLIGGDRCSF*TDTQDLIWGRK
Trigger: TTTACGACCCCAAATCAGGTCTTGGGTGTCAGTTCAAAAGCTACATCTGTCACCACCTATAAGATAGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS GCA 72 bp TGTACTGAAAGATGTTCAGGTTACTTCTCCTTAGAATaGCAGAACCCGAGTAGAGAATGTCTAGGCTGTAAG +
Preference number: 6 (lower is better)
Translates to: CTERCSGYFSLE*QNPSRECLGCK
Trigger: CTTACAGCCTAGACATTCTCTACTCGGGTTCTGGCATTCTAAGGAGAAGTAACCTGAACATCTTTCAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CAA 72 bp GTCTTGAACAATGGCGAGCATGTATTTATTCATTTCTaGGGGAAGCTCCCCAATAGACAGCAGGATGTTCTT +
Preference number: 6 (lower is better)
Translates to: VLNNGEHVFIHF*GKLPNRQQDVL
Trigger: AAGAACATCCTGCTGTCTATTGGGGAGCTTCCCCAAGAAATGAATAAATACATGCTCGCCATTGTTCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS TCA 72 bp ATGATAGCAGCTGCAGCAGTGCGCACAGTCTTTTCATaGACTTTACGGTTTTGGTGGTATATTCTGTTTAAG +
Preference number: 6 (lower is better)
Translates to: MIAAAAVRTVFS*TLRFWWYILFK
Trigger: CTTAAACAGAATATACCACCAAAACCGTAAAGTTCATGAAAAGACTGTGCGCACTGCTGCAGCTGCTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CCA 72 bp TCCATTGCACCTGAAATATCAATAGCTAGACCACCCTaGACCTCTATATTGGCTTTTAGTCCAGATTGTAAC +
Preference number: 6 (lower is better)
Translates to: SIAPEISIARPP*TSILAFSPDCN
Trigger: GTTACAATCTGGACTAAAAGCCAATATAGAGGTCCAGGGTGGTCTAGCTATTGATATTTCAGGTGCAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CCA 72 bp TTGCAGGCATTTCAAAACGTAGGATGTCTTGAACAATaGCGAGCATGTATTTATTCATTTCTTGGGGAAGCT +
Preference number: 6 (lower is better)
Translates to: LQAFQNVGCLEQ*RACIYSFLGEA
Trigger: AGCTTCCCCAAGAAATGAATAAATACATGCTCGCCATTGTTCAAGACATCCTACGTTTTGAAATGCCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6
CDS CCA 72 bp TCAACATTTACATCCTTCATCGTTATTTGGATCAACTaGTCATCATCACCATCAGGATTCCTCCATAGTAAG +
Preference number: 6 (lower is better)
Translates to: STFTSFIVIWIN*SSSPSGFLHSK
Trigger: CTTACTATGGAGGAATCCTGATGGTGATGATGACCAGTTGATCCAAATAACGATGAAGGATGTAAATGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265517.10
ENST00000422897.6
ENST00000457717.6
ENST00000505094.6
ENST00000511045.6
CDS TCA 72 bp ATTTTGCTTGCAGGCATTTCAAAACGTAGGATGTCTTaGACAATGGCGAGCATGTATTTATTCATTTCTTGG +
Preference number: 6 (lower is better)
Translates to: ILLAGISKRRMS*TMASMYLFISW
Trigger: CCAAGAAATGAATAAATACATGCTCGCCATTGTTCAAGACATCCTACGTTTTGAAATGCCTGCAAGCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265517.10
ENST00000457717.6
ENST00000511045.6