Pregenerated sensors for MTRF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000120662Ensembl transcript IDs: ENST00000239852.10, ENST00000379477.5, ENST00000379480.9, ENST00000430347.3, ENST00000452359.5, ENST00000473492.1, ENST00000480434.5, ENST00000492827.1, ENST00000497679.6, ENST00000498245.1
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTATCTCCTACAGGCAAATTCCTCAATATGCCTACCATAATCTGCTaGTGTATAATTCAGAAGTTCAAATTGCCAGTGTTTATAGCACGA | + |
|
Preference number: 1 (lower is better) Translates to: VSPTGKFLNMPTIIC*CIIQKFKLPVFIAR Trigger: TCGTGCTATAAACACTGGCAATTTGAACTTCTGAATTATACACCAGCAGATTATGGTAGGCATATTGAGGAATTTGCCTGTAGGAGATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCACTTCAGTCTGCCTCTTaGTATAGGTCCATTTCATTT | + |
|
Preference number: 2 (lower is better) Translates to: AGLKFLPQEIFPLWPFKALQSAS*YRSISF Trigger: AAATGAAATGGACCTATATCAAGAGGCAGACTGAAG...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATCATTTGGCACAAGGCTCTaGAAAAGCTCATTGTACAAC | + |
|
Preference number: 2 (lower is better) Translates to: WQMSPPVVLPAVTSKITSFGTRL*KSSLYN Trigger: GTTGTACAATGAGCTTTTCCAGAGCCTTGTGCCAAA...TGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCTTTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACCCTACCATAATCTGCTaGTGTATAATTCAGAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: PPFYCLLLANNSAIIVSHPTIIC*CIIQKF Trigger: GAACTTCTGAATTATACACCAGCAGATTATGGTAGG...GTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATGTCATATTTCTCCTTaGGCACAAGGCTCTGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CWQMSPPVVLPAVTSKITCHISP*AQGSGK Trigger: TTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGACA...TGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATCATTTTTGTTTTTGATCAATGGTTaGCCTTTCTTCCAGTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: MSPPVVLPAVTSKITSFLFLING*PFFQCK Trigger: CTTGCACTGGAAGAAAGGCAAACCATTGATCAAAAA...CAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGATTCAGAAGTTCAAATaGCCAGTGTTTATAGCACGA | + |
|
Preference number: 3 (lower is better) Translates to: ATVIDEPMPQCLVDIHQKIQKFK*PVFIAR Trigger: TCGTGCTATAAACACTGGCAATTTGAACTTCTGAAT...CTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAAATGCGCTGCATCCTTaGGGACAGGCCCACCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKANALHP*GQAHLG Trigger: CCCGAGGTGGGCCTGTCCTCAAGGATGCAGCGCATT...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGGCCCACCTCGGGGATaGGCTGAACTCGGTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAGPPRG*AELGES Trigger: GGATTCACCGAGTTCAGCGCATCCCCGAGGTGGGCC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATGTCCGAATTCGCTCTaGCTGGGCTCTTGTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKACPNSL*LGSCSH Trigger: GTGGGAACAAGAGCCCAGTCAGAGCGAATTCGGACA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAAGCCCTGTGGGGATGTaGACAAGTCTGACGGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKASPVGM*TSLTAL Trigger: TAGTGCCGTCAGACTTGTCCACATCCCCACAGGGCT...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCACGAATTCGCTCTGACTaGGCTCTTGTTCCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKARIRSD*ALVPTC Trigger: GCAGGTGGGAACAAGAGCCCAGTCAGAGCGAATTCG...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGACATCGTTCCTGTGTaGATGCGCTGCATCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKADIVPV*MRCILE Trigger: CTCAAGGATGCAGCGCATTCACACAGGAACGATGTC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATCCACCTCATCTGGCTaGGGAAGGACAATAACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKASTSSG*GRTITD Trigger: GTCGGTTATTGTCCTTCCTCAGCCAGATGAGGTGGA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGAGATCTTCCCCCTTTaGCCCTTCAAAGCACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAEIFPL*PFKALG Trigger: TCCCAGTGCTTTGAAGGGCCAAAGGGGGAAGATCTC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGTTAGCTCTCTTTACTaGGGTCGGAACCTTCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAVSSLY*GRNLPR Trigger: TCTCGGAAGGTTCCGACCTCAGTAAAGAGAGCTAAC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGGTGCCAACTCAGCATaGCTTCTGTTCAAGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAGANSA*LLFKDL Trigger: AAGGTCCTTGAACAGAAGGCATGCTGAGTTGGCACC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAAATGGCTGCAAGAGGTaGCAACTCAGCATGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKANGCKR*QLSMPS Trigger: AGAAGGCATGCTGAGTTGGCACCTCTTGCAGCCATT...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATCGTTCCTGTGTGAATaGGCTGCATCCTTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKASFLCE*AASLRT Trigger: TGTCCTCAAGGATGCAGCGCATTCACACAGGAACGA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAAGCCAAACACACAGGTaGCGATTCATCTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKASQTHR*RFISAS Trigger: AGATGCTGAGATGAATCGTCACCTGTGTGTTTGGCT...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCTTTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACCTGGGAGGCGAAGGTTaGAGTGAACTGAGATCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPFYCLLLANNSAIIVSHLGGEG*SELRSH Trigger: GTGCGATCTCAGTTCACTGCAACCTTCGCCTCCCAG...GTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATTCTTGGTAAATGGCTaGAAGAGGTGCCAACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAFLVNG*KRCQLS Trigger: GCTGAGTTGGCACCTCTTGCAGCCATTTACCAAGAA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATCATTTTTGCCACTGCAACCAGCGTaGGCGACAAAGCAACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSPPVVLPAVTSKITSFLPLQPA*ATKQHA Trigger: AGCGTGTTGCTTTGTCGCCCACGCTGGTTGCAGTGG...CAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCACACATCCACCTCATCTaGCTGAGGAAGGACAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAHIHLI*LRKDNN Trigger: GTTATTGTCCTTCCTCAGCCAGATGAGGTGGATGTG...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGCCCTCCTGCTCCTTTaGCTCGAAATGTATCTATTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAALLLL*LEMYLF Trigger: GAATAGATACATTTCGAGCCAAAGGAGCAGGAGGGC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGGCCCTTCAAAGCACTaGGATTACAGGCATAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAGPSKH*DYRHKH Trigger: ATGCTTATGCCTGTAATCCCAGTGCTTTGAAGGGCC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGGATGTGGACAAGTCTaGCGGCACTATCAGTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAGCGQV*RHYQFY Trigger: ATAAAACTGATAGTGCCGTCAGACTTGTCCACATCC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGGCTTCTTCATCTGCTaGTTGAAGCAGTCTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAGFFIC*LKQSLN Trigger: ATTCAGAGACTGCTTCAATCAGCAGATGAAGAAGCC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR GCA 90 bp | TGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATTCTTGGTAAATGGCTaGAAGAGGTGCCAACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CWQMSPPVVLPAVTSKITFLVNG*KRCQLS Trigger: GCTGAGTTGGCACCTCTTGCAGCCATTTACCAAGAA...TGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGTTTTATTAACATGCTaGCCTCCTGCTCCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAVLLTC*PPAPLA Trigger: AGCCAAAGGAGCAGGAGGGCAGCATGTTAATAAAAC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGCTCTTGTTCCCACCTaGAGTTTTCTAGCACTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAALVPT*SFLALC Trigger: ACAAAGTGCTAGAAAACTGCAGGTGGGAACAAGAGC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAACATGGGGTCTATTTTaGCCAGGCTGGTCTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKATWGLF*PGWSQI Trigger: AATTTGAGACCAGCCTGGGCAAAATAGACCCCATGT...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATCTCGGGTAAATTGTTaGCAGATGTCACCTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKASRVNC*QMSPPV Trigger: TACTGGAGGTGACATCTGCCAACAATTTACCCGAGA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATCATATGCTATCCTGTaGTCACTGACTCTATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKASYAIL*SLTLSW Trigger: CCAGGATAGAGTCAGTGACCACAGGATAGCATATGA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCACTAGCACTTTGTTGCTaGCGCTTGTCTTTCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKALALCC*RLSFSI Trigger: TATTGAGAAAGACAAGCGTCAGCAACAAAGTGCTAG...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATTCTGTAGTGCTTTATaGTTCCAGAGCATCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAFCSAL*FQSILV Trigger: CACCAAGATGCTCTGGAAGCATAAAGCACTACAGAA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCTTTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACAATGGCTGCAAGAGGTaGCAACTCAGCATGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPFYCLLLANNSAIIVSHNGCKR*QLSMPS Trigger: AGAAGGCATGCTGAGTTGGCACCTCTTGCAGCCATT...GTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATCAGTTTTATTAACATaGTGCCCTCCTGCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKASVLLT*CPPAPL Trigger: CAAAGGAGCAGGAGGGCAGCATGTTAATAAAACTGA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAATCACGAACTTCATATaGTATCCTGTGGTCACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAITNFI*YPVVTD Trigger: GTCAGTGACCACAGGATAGCATATGAAGTTCGTGAT...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATTTGGCACAAGGCTCTaGAAAAGCTCATTGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAFGTRL*KSSLYN Trigger: GTTGTACAATGAGCTTTTCCAGAGCCTTGTGCCAAA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGTCATATTTCTCCTTTaGCACAAGGCTCTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAVIFLL*HKALEK Trigger: CTTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGAC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | TGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATCTCGGGTAAATTGTTaGCAGATGTCACCTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CWQMSPPVVLPAVTSKITSRVNC*QMSPPV Trigger: TACTGGAGGTGACATCTGCCAACAATTTACCCGAGA...TGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCACTATTCGCAAATCCTTaGGGTCCAATTTCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKALFANP*GPISHP Trigger: TGGATGTGAAATTGGACCCCAAGGATTTGCGAATAG...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCACTATTTTGCCCAGGCTaGTCTCAAATTCTTACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKALFCPG*SQILTS Trigger: TGAGGTAAGAATTTGAGACCAGCCTGGGCAAAATAG...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATCATTTTTGGTTAGCTCTCTTTACTaGGGTCGGAACCTTCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSPPVVLPAVTSKITSFLVSSLY*GRNLPR Trigger: TCTCGGAAGGTTCCGACCTCAGTAAAGAGAGCTAAC...CAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR GCA 90 bp | TGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATTCTGTAGTGCTTTATaGTTCCAGAGCATCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CWQMSPPVVLPAVTSKITFCSAL*FQSILV Trigger: CACCAAGATGCTCTGGAAGCATAAAGCACTACAGAA...TGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR GCA 90 bp | ATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATCATTTTTGGGTGCCAACTCAGCATaGCTTCTGTTCAAGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: MSPPVVLPAVTSKITSFLGANSA*LLFKDL Trigger: AAGGTCCTTGAACAGAAGGCATGCTGAGTTGGCACC...CAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACTGTAATGGCTGCAAGAGGTaGCAACTCAGCATGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFYCLLLANNSAIIVSHCNGCKR*QLSMPS Trigger: AGAAGGCATGCTGAGTTGGCACCTCTTGCAGCCATT...ACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR GCA 90 bp | ATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATCATTTTTGAATGGCTGCAAGAGGTaGCAACTCAGCATGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MSPPVVLPAVTSKITSFLNGCKR*QLSMPS Trigger: AGAAGGCATGCTGAGTTGGCACCTCTTGCAGCCATT...CAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR GCA 90 bp | GCCACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTCTTGGTAAATGGCTaGAAGAGGTGCCAACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATVIDEPMPQCLVDIHQKFLVNG*KRCQLS Trigger: GCTGAGTTGGCACCTCTTGCAGCCATTTACCAAGAA...CTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCACTGTCTGTACCCAGATaGTCATTGTTATTGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKALSVPR*SLLLND Trigger: GTCATTCAATAACAATGAGCATCTGGGTACAGACAG...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATGTGATCTTTCTTGTTaGCATTCTACTACTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKACDLSC*HSTTSP Trigger: AGGGCTAGTAGTAGAATGCCAACAAGAAAGATCACA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATCACTGACTCTATCCTaGGTGAAATTATATGTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKASLTLS*VKLYVR Trigger: TCGGACATATAATTTCACCCAGGATAGAGTCAGTGA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCACCAAAAGTTCAGCAATaGCTTCTTCATCTGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAPKVQQ*LLHLLI Trigger: AATCAGCAGATGAAGAAGCCATTGCTGAACTTTTGG...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR TCA 90 bp | GCCACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGAATAGTAAGCCACTGTaGTTGATGAGCCTATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATVIDEPMPQCLVDIHQKNSKPL*LMSLCH Trigger: GTGGCATAGGCTCATCAATCACAGTGGCTTACTATT...CTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR GCA 90 bp | GTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTTCAACTCAGCATCAAAATGTaGCGAGCACAGTGGCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: VIDEPMPQCLVDIHQKFQLSIKM*RAQWLT Trigger: CGTGAGCCACTGTGCTCGGCACATTTTGATGCTGAG...TTGAAACTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGATGGCAATATCTCCTaGACCAATTCTTACTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKADGNIS*TNSYLT Trigger: TGTTAAGTAAGAATTGGTCCAGGAGATATTGCCATC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CCA 90 bp | AATTGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATACATTGCTCAAGTGTTTaGTACTCCTTACTCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NCWQMSPPVVLPAVTSKIHCSSV*YSLLRF Trigger: GAACCTGAGTAAGGAGTACCAAACACTTGAGCAATG...TATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CCA 90 bp | GCCACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTCTCGGGTAAATTGTTaGCAGATGTCACCTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ATVIDEPMPQCLVDIHQKSRVNC*QMSPPV Trigger: TACTGGAGGTGACATCTGCCAACAATTTACCCGAGA...CTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATCCACCATAATCTGCTaGTGTATAATTCAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKFLPQEIFPLWPFKASTIIC*CIIQKF Trigger: GAACTTCTGAATTATACACCAGCAGATTATGGTGGA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR TCA 90 bp | ACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTTGTTAGCTCTCTTTACTaGGGTCGGAACCTTCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVIDEPMPQCLVDIHQKFVSSLY*GRNLPR Trigger: TCTCGGAAGGTTCCGACCTCAGTAAAGAGAGCTAAC...AAACTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR TCA 90 bp | TCTCCTACAGGCAAATTCCTCAATATGCCTACCATAATCTGCTGGTGTATAATTAGCCAAACACACAGGTaGCGATTCATCTCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SPTGKFLNMPTIICWCIISQTHR*RFISAS Trigger: TGATGCTGAGATGAATCGTCACCTGTGTGTTTGGCT...AATTATACACCAGCAGATTATGGTAGGCATATTGAGGAATTTGCCTGTAGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR TCA 90 bp | CAATGGTTTGCCTTTCTTCCAGTGCAAGTTCTTGTAACTGCTTTTCATCTTGTTAGCATCTTGGTGTCTTaGTGGCAATATCTCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QWFAFLPVQVLVTAFHLVSILVS*WQYLLD Trigger: GTCCAGGAGATATTGCCATCAAGACACCAAGATGCT...AACAAGATGAAAAGCAGTTACAAGAACTTGCACTGGAAGAAAGGCAAACCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACTGTAATAGTAAGCCACTGTaGTTGATGAGCCTATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFYCLLLANNSAIIVSHCNSKPL*LMSLCH Trigger: GTGGCATAGGCTCATCAATCACAGTGGCTTACTATT...ACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR TCA 90 bp | CAATGGTTTGCCTTTCTTCCAGTGCAAGTTCTTGTAACTGCTTTTCATCTTGTTAGCCAAACACACAGGTaGCGATTCATCTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QWFAFLPVQVLVTAFHLVSQTHR*RFISAS Trigger: AGATGCTGAGATGAATCGTCACCTGTGTGTTTGGCT...AACAAGATGAAAAGCAGTTACAAGAACTTGCACTGGAAGAAAGGCAAACCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497679.6 |
||
| CDS-3UTR GCA 90 bp | GCCACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTCATTCACAGGGATATaGTGCAGACATTGCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ATVIDEPMPQCLVDIHQKSFTGI*CRHCSS Trigger: ACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGA...CTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR GCA 90 bp | GTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTTCAAGGTGCCAACTCAGCATaGCTTCTGTTCAAGGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIDEPMPQCLVDIHQKFQGANSA*LLFKDL Trigger: AAGGTCCTTGAACAGAAGGCATGCTGAGTTGGCACC...TTGAAACTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR GCA 90 bp | TTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACTGTGATTTCTTGGTAAATGGCTaGAAGAGGTGCCAACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FYCLLLANNSAIIVSHCDFLVNG*KRCQLS Trigger: GCTGAGTTGGCACCTCTTGCAGCCATTTACCAAGAA...ATCACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR GCA 90 bp | GCCACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTCTCCCTAAGCAAATaGTTCCCTCCTTTCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ATVIDEPMPQCLVDIHQKFSLSK*FPPFYC Trigger: ACAGTAGAAAGGAGGGAAGCATTTGCTTAGGGAGAA...CTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR CCA 90 bp | TATTTCTCGGGTAAATTGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTGATGGCAATATCTCCTaGACCAATTCTTACTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: YFSGKLLADVTSSSPSSCDGNIS*TNSYLT Trigger: TGTTAAGTAAGAATTGGTCCAGGAGATATTGCCATC...ACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACAATTTACCCGAGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CCA 90 bp | ATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATCATTTTTGGTCATATTTCTCCTTTaGCACAAGGCTCTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSPPVVLPAVTSKITSFLVIFLL*HKALEK Trigger: CTTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGAC...CAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CCA 90 bp | AATTGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATACCTACCATAATCTGCTaGTGTATAATTCAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NCWQMSPPVVLPAVTSKIPTIIC*CIIQKF Trigger: GAACTTCTGAATTATACACCAGCAGATTATGGTAGG...TATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR GCA 90 bp | CCTCCTTTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACATGCCTACCATAATCTaGTGGTGTATAATTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPFYCLLLANNSAIIVSHMPTII*WCIIQK Trigger: CTTCTGAATTATACACCAGCAGATTATGGTAGGCAT...GTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR GCA 90 bp | GCCACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGATGCCTACCATAATCTaGTGGTGTATAATTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ATVIDEPMPQCLVDIHQKMPTII*WCIIQK Trigger: CTTCTGAATTATACACCAGCAGATTATGGTAGGCAT...CTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR GCA 90 bp | CAATGGTTTGCCTTTCTTCCAGTGCAAGTTCTTGTAACTGCTTTTCATCTTGTTTTCTCCCTAAGCAAATaGTTCCCTCCTTTCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QWFAFLPVQVLVTAFHLVFSLSK*FPPFYC Trigger: ACAGTAGAAAGGAGGGAAGCATTTGCTTAGGGAGAA...AACAAGATGAAAAGCAGTTACAAGAACTTGCACTGGAAGAAAGGCAAACCATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCTACAGGCAAATTCCTCAATATGCCTACCATAATCTGCTGGTGTATAATTTTTGGCACAAGGCTCTaGAAAAGCTCATTGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPTGKFLNMPTIICWCIIFGTRL*KSSLYN Trigger: GTTGTACAATGAGCTTTTCCAGAGCCTTGTGCCAAA...AATTATACACCAGCAGATTATGGTAGGCATATTGAGGAATTTGCCTGTAGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR CCA 90 bp | TTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACTGTGATGTCATATTTCTCCTTTaGCACAAGGCTCTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FYCLLLANNSAIIVSHCDVIFLL*HKALEK Trigger: CTTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGAC...ATCACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACTGTAGTTCAAGGTTAAAGTaGGCTATGATTACACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: PFYCLLLANNSAIIVSHCSSRLK*AMITLL Trigger: CAGTAGTGTAATCATAGCTCACTTTAACCTTGAACT...ACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR CCA 90 bp | ATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATCATTTTTGGATGGCAATATCTCCTaGACCAATTCTTACTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: MSPPVVLPAVTSKITSFLDGNIS*TNSYLT Trigger: TGTTAAGTAAGAATTGGTCCAGGAGATATTGCCATC...CAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CCA 90 bp | ACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTTTTTGGCACAAGGCTCTaGAAAAGCTCATTGTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVIDEPMPQCLVDIHQKFFGTRL*KSSLYN Trigger: GTTGTACAATGAGCTTTTCCAGAGCCTTGTGCCAAA...AAACTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR CCA 90 bp | ACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTTGTCATATTTCTCCTTTaGCACAAGGCTCTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVIDEPMPQCLVDIHQKFVIFLL*HKALEK Trigger: CTTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGAC...AAACTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACTGTCCTACCATAATCTGCTaGTGTATAATTCAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFYCLLLANNSAIIVSHCPTIIC*CIIQKF Trigger: GAACTTCTGAATTATACACCAGCAGATTATGGTAGG...ACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR TCA 90 bp | CAATGGTTTGCCTTTCTTCCAGTGCAAGTTCTTGTAACTGCTTTTCATCTTGTTAGTTCAAGGTTAAAGTaGGCTATGATTACACTACTG | + |
|
Preference number: 4 (lower is better) Translates to: QWFAFLPVQVLVTAFHLVSSRLK*AMITLL Trigger: CAGTAGTGTAATCATAGCTCACTTTAACCTTGAACT...AACAAGATGAAAAGCAGTTACAAGAACTTGCACTGGAAGAAAGGCAAACCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS TCA 90 bp | AAGGACAATAACCGACATCGTTCCTGTGTGAATGCGCTGCATCCTTaGGGACAGGCCCACCTCGGGGATGCGCTGAACTCGGTGAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: KDNNRHRSCVNALHP*GQAHLGDALNSVNP Trigger: GGGATTCACCGAGTTCAGCGCATCCCCGAGGTGGGCCTGTCCTCAAGGATGCAGCGCATTCACACAGGAACGATGTCGGTTATTGTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379477.5 ENST00000379480.9 |
||
| CDS GCA 90 bp | CTGTGTGAATGCGCTGCATCCTTGAGGACAGGCCCACCTCGGGGATaGGCTGAACTCGGTGAATCCCACCCTCATACTTCAAATGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LCECAASLRTGPPRG*AELGESHPHTSNAY Trigger: ATAAGCATTTGAAGTATGAGGGTGGGATTCACCGAGTTCAGCGCATCCCCGAGGTGGGCCTGTCCTCAAGGATGCAGCGCATTCACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379477.5 ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGAATGCGCTGCATCCTaGAGGACAGGCCCACCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAECAAS*RTGPPR Trigger: CCGAGGTGGGCCTGTCCTCAAGGATGCAGCGCATTC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS TCA 90 bp | GGCAGCAGCACGGGCAAACCATGCTGTGTAACTCAGTATATGGAGTaGTTCCATAAAGAGGCAATACAGGAGGCGGCGGGGAAGATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSTGKPCCVTQYME*FHKEAIQEAAGKIR Trigger: CCTGATCTTCCCCGCCGCCTCCTGTATTGCCTCTTTATGGAATCACTCCATATACTGAGTTACACAGCATGGTTTGCCCGTGCTGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379477.5 ENST00000498245.1 |
||
| CDS TCA 90 bp | AGATCGCACCACTGCAACCAGCGTGGGCGACAAAGCAACACGACCTaGGAACAGCACGACTTCTCCATTACCCATCACAGTAACAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: RSHHCNQRGRQSNTT*EQHDFSITHHSNSI Trigger: AATACTGTTACTGTGATGGGTAATGGAGAAGTCGTGCTGTTCTCAGGTCGTGTTGCTTTGTCGCCCACGCTGGTTGCAGTGGTGCGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498245.1 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAAGAGATCTTCCCCCTTaGGCCCTTCAAAGCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKARDLPP*ALQSTG Trigger: CCCAGTGCTTTGAAGGGCCAAAGGGGGAAGATCTCT...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | TGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACAAGGCAGGATAATCGCTaGAACCTGGGAGGCGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CWQMSPPVVLPAVTSKITRQDNR*NLGGEG Trigger: ACCTTCGCCTCCCAGGTTCAAGCGATTATCCTGCCT...TGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS TCA 90 bp | AGCAACACGCTAAGAAAAAGAAGAATACACGTTAGCTCTCTTTACTaGGGTCGGAACCTTCCGAGACCCGCCACATTTCAGCCCGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: SNTLRKRRIHVSSLY*GRNLPRPATFQPDK Trigger: TTTGTCGGGCTGAAATGTGGCGGGTCTCGGAAGGTTCCGACCTCAGTAAAGAGAGCTAACGTGTATTCTTCTTTTTCTTAGCGTGTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS GCA 90 bp | TGCTTGTTCAGTCTCCTGAATTTCTTGGTAAATGGCTGCAAGAGGTaGCAACTCAGCATGCCTTCTGTTCAAGGACCTTCGGTTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLFSLLNFLVNGCKR*QLSMPSVQGPSVFL Trigger: GAGGAAAACCGAAGGTCCTTGAACAGAAGGCATGCTGAGTTGGCACCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACTGAACAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000239852.10 ENST00000379477.5 ENST00000379480.9 ENST00000430347.3 ENST00000452359.5 ENST00000497679.6 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATTCTCGGGTAAATTGTaGGCAGATGTCACCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAFSGKL*ADVTSS Trigger: ACTGGAGGTGACATCTGCCAACAATTTACCCGAGAA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATGCCCTCCTGCTCCTTaGGCTCGAAATGTATCTATT | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKACPPAP*ARNVSI Trigger: AATAGATACATTTCGAGCCAAAGGAGCAGGAGGGCA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS TCA 90 bp | TCTCAGCATCTAAGAAAAAGAAGAATACACGTTAGCTCTCTTTACTaGGGTCGGAACCTTCCGAGACCCGCCACATTTCAGCCCGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: SQHLRKRRIHVSSLY*GRNLPRPATFQPDK Trigger: TTTGTCGGGCTGAAATGTGGCGGGTCTCGGAAGGTTCCGACCTCAGTAAAGAGAGCTAACGTGTATTCTTCTTTTTCTTAGATGCTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000379480.9 ENST00000430347.3 ENST00000497679.6 |
||
| CDS GCA 90 bp | TGCCTTCTGTTCAAGGACCTTCGGTTTTCCTCATTCACAGGGATATaGTGCAGACATTGCTCAAGTGTTTGGTACTCCTTACTCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLLFKDLRFSSFTGI*CRHCSSVWYSLLRF Trigger: GAACCTGAGTAAGGAGTACCAAACACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGAGGAAAACCGAAGGTCCTTGAACAGAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000239852.10 ENST00000379477.5 ENST00000379480.9 ENST00000430347.3 ENST00000452359.5 ENST00000497679.6 |
||
| CDS GCA 90 bp | GTGGGGATGTGGACAAGTCTGACGGCACTATCAGTTTTATTAACATaGTGCCCTCCTGCTCCTTTGGCTCGAAATGTATCTATTCGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VGMWTSLTALSVLLT*CPPAPLARNVSIRK Trigger: TTTGCGAATAGATACATTTCGAGCCAAAGGAGCAGGAGGGCAGCATGTTAATAAAACTGATAGTGCCGTCAGACTTGTCCACATCCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000379477.5 ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGATATGCTGCAGACATaGCTCAAGTGTTTGGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKADMLQT*LKCLVL Trigger: GAGTACCAAACACTTGAGCAATGTCTGCAGCATATC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAAGTCTCCTGAATTTCTaGGTAAATGGCTGCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKASLLNF*VNGCKR Trigger: CCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACT...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | TGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATTCTCGGGTAAATTGTaGGCAGATGTCACCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CWQMSPPVVLPAVTSKITFSGKL*ADVTSS Trigger: ACTGGAGGTGACATCTGCCAACAATTTACCCGAGAA...TGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAACATTGCTCAAGTGTTaGGTACTCCTTACTCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKATLLKC*VLLTQV Trigger: AACCTGAGTAAGGAGTACCAAACACTTGAGCAATGT...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | TGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACAGATATGCTGCAGACATaGCTCAAGTGTTTGGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: CWQMSPPVVLPAVTSKITDMLQT*LKCLVL Trigger: GAGTACCAAACACTTGAGCAATGTCTGCAGCATATC...TGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATGTCATATTTCTCCTTaGGCACAAGGCTCTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKACHISP*AQGSGK Trigger: TTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGACA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATATTCTCGGGTAAATTGTaGGCAGATGTCACCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NCWQMSPPVVLPAVTSKIFSGKL*ADVTSS Trigger: ACTGGAGGTGACATCTGCCAACAATTTACCCGAGAA...TATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATTTTCTAGCACTTTGTaGCTGACGCTTGTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAFSSTL*LTLVFL Trigger: GAGAAAGACAAGCGTCAGCAACAAAGTGCTAGAAAA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCACAGTTTTCTAGCACTTaGTTGCTGACGCTTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAQFSST*LLTLVF Trigger: AAAGACAAGCGTCAGCAACAAAGTGCTAGAAAACTG...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCATTTTTGATCAATGGTTaGCCTTTCTTCCAGTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAFLING*PFFQCK Trigger: CTTGCACTGGAAGAAAGGCAAACCATTGATCAAAAA...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | GCCACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTCTCGGGTAAATTGTaGGCAGATGTCACCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ATVIDEPMPQCLVDIHQKFSGKL*ADVTSS Trigger: ACTGGAGGTGACATCTGCCAACAATTTACCCGAGAA...CTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS CCA 90 bp | ATATCACGAACTTCATATGCTATCCTGTGGTCACTGACTCTATCCTaGGTGAAATTATATGTCCGAATTCGCTCTGACTGGGCTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ISRTSYAILWSLTLS*VKLYVRIRSDWALV Trigger: AACAAGAGCCCAGTCAGAGCGAATTCGGACATATAATTTCACCCAGGATAGAGTCAGTGACCACAGGATAGCATATGAAGTTCGTGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379477.5 ENST00000379480.9 ENST00000473492.1 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAATGTATCTGTCTAAATaGATGAGAATGGAGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAMYLSK*MRMELD Trigger: ATCCAGCTCCATTCTCATCAATTTAGACAGATACAT...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAATTCAGAAGTTCAAATaGCCAGTGTTTATAGCACGA | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAIQKFK*PVFIAR Trigger: TCGTGCTATAAACACTGGCAATTTGAACTTCTGAAT...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGTCTCAAATTCTTACCTCAAGAGATCTTCCCCCTTTGGCCCTTCAAAGCAGTACCCAGATGCTCATaGTTATTGAATGACTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: AGLKFLPQEIFPLWPFKAVPRCS*LLNDSY Trigger: ATATGAGTCATTCAATAACAATGAGCATCTGGGTAC...TGCTTTGAAGGGCCAAAGGGGGAAGATCTCTTGAGGTAAGAATTTGAGACCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | CCTTTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACTGTAGTCTCCTGAATTTCTaGGTAAATGGCTGCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFYCLLLANNSAIIVSHCSLLNF*VNGCKR Trigger: CCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACT...ACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR CAA 90 bp | CCTCCTTTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACTGTCATATTTCTCCTTaGGCACAAGGCTCTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPFYCLLLANNSAIIVSHCHISP*AQGSGK Trigger: TTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGACA...GTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR CAA 90 bp | AATTGTTGGCAGATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAATGTATCTGTCTAAATaGATGAGAATGGAGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NCWQMSPPVVLPAVTSKIMYLSK*MRMELD Trigger: ATCCAGCTCCATTCTCATCAATTTAGACAGATACAT...TATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACATCTGCCAACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CAA 90 bp | ATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATCATTTTTGACATTGCTCAAGTGTTaGGTACTCCTTACTCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: MSPPVVLPAVTSKITSFLTLLKC*VLLTQV Trigger: AACCTGAGTAAGGAGTACCAAACACTTGAGCAATGT...CAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CAA 90 bp | TCAATGGTTTGCCTTTCTTCCAGTGCAAGTTCTTGTAACTGCTTTTCATCTTGTAGTCTCCTGAATTTCTaGGTAAATGGCTGCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SMVCLSSSASSCNCFSSCSLLNF*VNGCKR Trigger: CCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACT...ACAAGATGAAAAGCAGTTACAAGAACTTGCACTGGAAGAAAGGCAAACCATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CAA 90 bp | ATGTCACCTCCAGTAGTCCTTCCAGCTGTCACCTCTAAAATAACATCATTTTTGTGTCATATTTCTCCTTaGGCACAAGGCTCTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: MSPPVVLPAVTSKITSFLCHISP*AQGSGK Trigger: TTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGACA...CAAAAATGATGTTATTTTAGAGGTGACAGCTGGAAGGACTACTGGAGGTGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000497679.6 |
||
| CDS-3UTR CAA 90 bp | CCTCCTTTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACATGTATCTGTCTAAATaGATGAGAATGGAGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PPFYCLLLANNSAIIVSHMYLSK*MRMELD Trigger: ATCCAGCTCCATTCTCATCAATTTAGACAGATACAT...GTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAAAGGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR CAA 90 bp | GTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTTCAAGATATGCTGCAGACATaGCTCAAGTGTTTGGTACTC | + |
|
Preference number: 5 (lower is better) Translates to: VIDEPMPQCLVDIHQKFQDMLQT*LKCLVL Trigger: GAGTACCAAACACTTGAGCAATGTCTGCAGCATATC...TTGAAACTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTTAGTCTCCTGAATTTCTaGGTAAATGGCTGCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TVIDEPMPQCLVDIHQKFSLLNF*VNGCKR Trigger: CCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACT...AAACTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTACAGGCAAATTCCTCAATATGCCTACCATAATCTGCTGGTGTATAATTTGTCATATTTCTCCTTaGGCACAAGGCTCTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPTGKFLNMPTIICWCIICHISP*AQGSGK Trigger: TTTTCCAGAGCCTTGTGCCAAAGGAGAAATATGACA...AATTATACACCAGCAGATTATGGTAGGCATATTGAGGAATTTGCCTGTAGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS CCA 90 bp | CCACATAAAAATTCCTTAATATCACGAACTTCATATGCTATCCTGTaGTCACTGACTCTATCCTGGGTGAAATTATATGTCCGAATTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PHKNSLISRTSYAIL*SLTLSWVKLYVRIR Trigger: GCGAATTCGGACATATAATTTCACCCAGGATAGAGTCAGTGACCACAGGATAGCATATGAAGTTCGTGATATTAAGGAATTTTTATGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000379477.5 ENST00000379480.9 |
||
| CDS-3UTR CAA 90 bp | ACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTTACATTGCTCAAGTGTTaGGTACTCCTTACTCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TVIDEPMPQCLVDIHQKFTLLKC*VLLTQV Trigger: AACCTGAGTAAGGAGTACCAAACACTTGAGCAATGT...AAACTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR CAA 90 bp | TTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACTGTGATTTTTTGATCAATGGTTaGCCTTTCTTCCAGTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FYCLLLANNSAIIVSHCDFLING*PFFQCK Trigger: CTTGCACTGGAAGAAAGGCAAACCATTGATCAAAAA...ATCACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR CAA 90 bp | TTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACTGTGATGTTTTGTCTAAAAACTaGCAGCCTTGTATCAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FYCLLLANNSAIIVSHCDVLSKN*QPCIKM Trigger: CATCTTGATACAAGGCTGCAAGTTTTTAGACAAAAC...ATCACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTGATTGATGAGCCTATGCCACAGTGTTTAGTAGATATACACCAAAAGTTTTTTTTGATCAATGGTTaGCCTTTCTTCCAGTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVIDEPMPQCLVDIHQKFFLING*PFFQCK Trigger: CTTGCACTGGAAGAAAGGCAAACCATTGATCAAAAA...AAACTTTTGGTGTATATCTACTAAACACTGTGGCATAGGCTCATCAATCACAGT 38% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTACAGGCAAATTCCTCAATATGCCTACCATAATCTGCTGGTGTATAATTATTCAGAAGTTCAAATaGCCAGTGTTTATAGCACGA | + |
|
Preference number: 5 (lower is better) Translates to: SPTGKFLNMPTIICWCIIIQKFK*PVFIAR Trigger: TCGTGCTATAAACACTGGCAATTTGAACTTCTGAAT...AATTATACACCAGCAGATTATGGTAGGCATATTGAGGAATTTGCCTGTAGGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS-3UTR CAA 90 bp | TTCTACTGTCTTCTCCTAGCTAACAACTCTGCTATAATAGTAAGCCACTGTGATATTCAGAAGTTCAAATaGCCAGTGTTTATAGCACGA | + |
|
Preference number: 5 (lower is better) Translates to: FYCLLLANNSAIIVSHCDIQKFK*PVFIAR Trigger: TCGTGCTATAAACACTGGCAATTTGAACTTCTGAAT...ATCACAGTGGCTTACTATTATAGCAGAGTTGTTAGCTAGGAGAAGACAGTAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000239852.10 ENST00000480434.5 |
||
| CDS TCA 72 bp | AACCGACATCGTTCCTGTGTGAATGCGCTGCATCCTTaGGGACAGGCCCACCTCGGGGATGCGCTGAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: NRHRSCVNALHP*GQAHLGDALNS Trigger: CGAGTTCAGCGCATCCCCGAGGTGGGCCTGTCCTCAAGGATGCAGCGCATTCACACAGGAACGATGTCGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379477.5 ENST00000379480.9 |
||
| CDS GCA 72 bp | TGCGCTGCATCCTTGAGGACAGGCCCACCTCGGGGATaGGCTGAACTCGGTGAATCCCACCCTCATACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CAASLRTGPPRG*AELGESHPHTS Trigger: TGAAGTATGAGGGTGGGATTCACCGAGTTCAGCGCATCCCCGAGGTGGGCCTGTCCTCAAGGATGCAGCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379477.5 ENST00000379480.9 |
||
| CDS TCA 72 bp | ACCACTGCAACCAGCGTGGGCGACAAAGCAACACGCTaGGAACAGCACGACTTCTCCATTACCCATCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: TTATSVGDKATR*EQHDFSITHHS Trigger: ACTGTGATGGGTAATGGAGAAGTCGTGCTGTTCTCAGCGTGTTGCTTTGTCGCCCACGCTGGTTGCAGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379477.5 |
||
| CDS TCA 72 bp | CACTGCAACCAGCGTGGGCGACAAAGCAACACGACCTaGGAACAGCACGACTTCTCCATTACCCATCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: HCNQRGRQSNTT*EQHDFSITHHS Trigger: ACTGTGATGGGTAATGGAGAAGTCGTGCTGTTCTCAGGTCGTGTTGCTTTGTCGCCCACGCTGGTTGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498245.1 |
||
| CDS TCA 72 bp | ACGGGCAAACCATGCTGTGTAACTCAGTATATGGAGTaGTTCCATAAAGAGGCAATACAGGAGGCGGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGKPCCVTQYME*FHKEAIQEAAG Trigger: CCCCGCCGCCTCCTGTATTGCCTCTTTATGGAATCACTCCATATACTGAGTTACACAGCATGGTTTGCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379477.5 ENST00000498245.1 |
||
| CDS CCA 72 bp | TCCTGGGTGAAATTATATGTCCGAATTCGCTCTGACTaGGCTCTTGTTCCCACCTGCAGTTTTCTAGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: SWVKLYVRIRSD*ALVPTCSFLAL Trigger: AAGTGCTAGAAAACTGCAGGTGGGAACAAGAGCCCAGTCAGAGCGAATTCGGACATATAATTTCACCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379477.5 ENST00000379480.9 ENST00000473492.1 |
||
| CDS TCA 72 bp | CTAAGAAAAAGAAGAATACACGTTAGCTCTCTTTACTaGGGTCGGAACCTTCCGAGACCCGCCACATTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRKRRIHVSSLY*GRNLPRPATFQ Trigger: CTGAAATGTGGCGGGTCTCGGAAGGTTCCGACCTCAGTAAAGAGAGCTAACGTGTATTCTTCTTTTTCTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000239852.10 ENST00000379480.9 ENST00000430347.3 ENST00000497679.6 |
||
| CDS GCA 72 bp | TGCTTGTTCAGTCTCCTGAATTTCTTGGTAAATGGCTaGAAGAGGTGCCAACTCAGCATGCCTTCTGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CLFSLLNFLVNG*KRCQLSMPSVQ Trigger: TTGAACAGAAGGCATGCTGAGTTGGCACCTCTTGCAGCCATTTACCAAGAAATTCAGGAGACTGAACAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000239852.10 ENST00000379477.5 ENST00000379480.9 ENST00000430347.3 ENST00000452359.5 ENST00000497679.6 |
||
| CDS GCA 72 bp | TGGACAAGTCTGACGGCACTATCAGTTTTATTAACATaGTGCCCTCCTGCTCCTTTGGCTCGAAATGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: WTSLTALSVLLT*CPPAPLARNVS Trigger: AGATACATTTCGAGCCAAAGGAGCAGGAGGGCAGCATGTTAATAAAACTGATAGTGCCGTCAGACTTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379477.5 ENST00000379480.9 |
||
| CDS CAA 72 bp | GGCTCTTGTTCCCACCTGCAGTTTTCTAGCACTTTGTaGCTGACGCTTGTCTTTCTCAATAATCTGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GSCSHLQFSSTL*LTLVFLNNLLV Trigger: TACCAGCAGATTATTGAGAAAGACAAGCGTCAGCAACAAAGTGCTAGAAAACTGCAGGTGGGAACAAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379477.5 ENST00000379480.9 ENST00000473492.1 |
||
| CDS GCA 72 bp | TTCAAGGACCTTCGGTTTTCCTCATTCACAGGGATATaGTGCAGACATTGCTCAAGTGTTTGGTACTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FKDLRFSSFTGI*CRHCSSVWYSL Trigger: TAAGGAGTACCAAACACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGAGGAAAACCGAAGGTCCTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000239852.10 ENST00000379477.5 ENST00000379480.9 ENST00000430347.3 ENST00000452359.5 ENST00000497679.6 |
||
| CDS GCA 72 bp | GGAATGAGACTGAGCCTTAATATCACGAACTTCATATaGTATCCTGTGGTCACTGACTCTATCCTGGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GMRLSLNITNFI*YPVVTDSILGE Trigger: TTCACCCAGGATAGAGTCAGTGACCACAGGATAGCATATGAAGTTCGTGATATTAAGGCTCAGTCTCATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473492.1 |
||
| CDS CCA 72 bp | ACTTCATATGCTATCCTGTGGTCACTGACTCTATCCTaGGTGAAATTATATGTCCGAATTCGCTCTGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: TSYAILWSLTLS*VKLYVRIRSDW Trigger: CCAGTCAGAGCGAATTCGGACATATAATTTCACCCAGGATAGAGTCAGTGACCACAGGATAGCATATGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379477.5 ENST00000379480.9 ENST00000473492.1 |
||
| CDS CAA 90 bp | CAAGGACCTTCGGTTTTCCTCATTCACAGGGATATGCTGCAGACATaGCTCAAGTGTTTGGTACTCCTTACTCAGGTTCTCCATATATTT | + |
|
Preference number: 6 (lower is better) Translates to: QGPSVFLIHRDMLQT*LKCLVLLTQVLHIF Trigger: AAATATATGGAGAACCTGAGTAAGGAGTACCAAACACTTGAGCAATGTCTGCAGCATATCCCTGTGAATGAGGAAAACCGAAGGTCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000239852.10 ENST00000379477.5 ENST00000379480.9 ENST00000430347.3 ENST00000452359.5 ENST00000497679.6 |
||
| CDS TCA 72 bp | TTAAGAGATGGATGTCTAAAAAGCCAAACACACAGGTaGCGATTCATCTCAGCATCAAAATGTGCCGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRDGCLKSQTHR*RFISASKCAEH Trigger: GTGCTCGGCACATTTTGATGCTGAGATGAATCGTCACCTGTGTGTTTGGCTTTTTAGACATCCATCTCTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239852.10 |
||
| CDS CAA 72 bp | GGCTGGATGGAGACAGAGCTGGTATTAGAATGTAAGTaGCCTGTTCAGGACTCAGTAATTTTCACTCTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GWMETELVLECK*PVQDSVIFTLN Trigger: ATTGAGAGTGAAAATTACTGAGTCCTGAACAGGCAACTTACATTCTAATACCAGCTCTGTCTCCATCCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379477.5 ENST00000492827.1 ENST00000498245.1 |
||
| CDS TCA 72 bp | TGTAGTGCTTTATGCTTCCAGAGCATCTTGGTGTCTTaGTGGCAATATCTCCTGGACCAATTCTTACTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: CSALCFQSILVS*WQYLLDQFLLN Trigger: GTTAAGTAAGAATTGGTCCAGGAGATATTGCCATCAAGACACCAAGATGCTCTGGAAGCATAAAGCACTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000239852.10 ENST00000379477.5 ENST00000379480.9 ENST00000430347.3 ENST00000452359.5 ENST00000497679.6 |
||
| CDS CCA 72 bp | TTCATCTCAGCATTTAATCACGACTATTCAGTCGGCTaGATGGAGACAGAGCTGGTATTAGAATGTAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FISAFNHDYSVG*METELVLECKL Trigger: CAACTTACATTCTAATACCAGCTCTGTCTCCATCCAGCCGACTGAATAGTCGTGATTAAATGCTGAGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379477.5 |
||
| CDS CCA 72 bp | TCCAGAGCATCTTGGTGTCTTGATGGCAATATCTCCTaGACCAATTCTTACTTAACAGATGAAGAATGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SRASWCLDGNIS*TNSYLTDEECN Trigger: ATTGCATTCTTCATCTGTTAAGTAAGAATTGGTCCAGGAGATATTGCCATCAAGACACCAAGATGCTCTGGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000239852.10 ENST00000379477.5 ENST00000379480.9 ENST00000430347.3 ENST00000452359.5 ENST00000497679.6 |
||
| CDS CCA 72 bp | TATATTTCTGTAGTGCTTTATGCTTCCAGAGCATCTTaGTGTCTTGATGGCAATATCTCCTGGACCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: YISVVLYASRAS*CLDGNISWTNS Trigger: AGAATTGGTCCAGGAGATATTGCCATCAAGACACCAAGATGCTCTGGAAGCATAAAGCACTACAGAAATATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000239852.10 ENST00000379477.5 ENST00000379480.9 ENST00000430347.3 ENST00000452359.5 ENST00000497679.6 |
||
| CDS CAA 90 bp | AGAGCAAGACTCTGTCTCTTTTACACATTGATTCTAATTCTTCAATaGCTTGTTCAGTCTCCTGAATTTCTTGGTAAATGGCTGCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RARLCLFYTLILILQ*LVQSPEFLGKWLQE Trigger: CTCTTGCAGCCATTTACCAAGAAATTCAGGAGACTGAACAAGCAATTGAAGAATTAGAATCAATGTGTAAAAGAGACAGAGTCTTGCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497679.6 |
||
| CDS TCA 72 bp | TTAAGAGATGGATGTCTAAAAAGCCAAACACACAGGTaGCGATTCATCTCAGCATTTAATCACGACTATTCA | + |
|
Preference number: 6 (lower is better) Translates to: LRDGCLKSQTHR*RFISAFNHDYS Trigger: TGAATAGTCGTGATTAAATGCTGAGATGAATCGTCACCTGTGTGTTTGGCTTTTTAGACATCCATCTCTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000379477.5 |
||
| CDS CCA 72 bp | AATTCCTTAATATCACGAACTTCATATGCTATCCTGTaGTCACTGACTCTATCCTGGGTGAAATTATATGTC | + |
|
Preference number: 6 (lower is better) Translates to: NSLISRTSYAIL*SLTLSWVKLYV Trigger: GACATATAATTTCACCCAGGATAGAGTCAGTGACCACAGGATAGCATATGAAGTTCGTGATATTAAGGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000379477.5 ENST00000379480.9 |
||
| CDS TCA 72 bp | TTAAGAGATGGATGTCTAAAAAGCCAAACACACAGGTaGCGATTCATCTCAGCATCTAAGAAAAAGAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LRDGCLKSQTHR*RFISASKKKKN Trigger: ATTCTTCTTTTTCTTAGATGCTGAGATGAATCGTCACCTGTGTGTTTGGCTTTTTAGACATCCATCTCTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000379480.9 ENST00000430347.3 ENST00000497679.6 |
||
| CDS CAA 72 bp | CAGATGAAGAATGCAATTCCTGTTTTGTCTAAAAACTaGCAGCCTTGTATCAAGATGTATCTGTCTAAATTG | + |
|
Preference number: 6 (lower is better) Translates to: QMKNAIPVLSKN*QPCIKMYLSKL Trigger: CAATTTAGACAGATACATCTTGATACAAGGCTGCAAGTTTTTAGACAAAACAGGAATTGCATTCTTCATCTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000239852.10 ENST00000379477.5 ENST00000379480.9 ENST00000430347.3 ENST00000452359.5 ENST00000497679.6 |
||
| CDS CAA 72 bp | CTCTGTCTCTTTTACACATTGATTCTAATTCTTCAATaGCTTGTTCAGTCTCCTGAATTTCTTGGTAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: LCLFYTLILILQ*LVQSPEFLGKW Trigger: CCATTTACCAAGAAATTCAGGAGACTGAACAAGCAATTGAAGAATTAGAATCAATGTGTAAAAGAGACAGAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497679.6 |
||