RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTR (Homo sapiens)

Ensembl gene IDs: ENSG00000116984

Ensembl transcript IDs: ENST00000366576.3, ENST00000366577.10, ENST00000463959.1, ENST00000470570.2, ENST00000535889.6, ENST00000650888.1, ENST00000651455.1, ENST00000652435.1, ENST00000652483.1, ENST00000674797.2, ENST00000679569.1, ENST00000679842.1, ENST00000680454.1, ENST00000681102.1, ENST00000681177.1, ENST00000681937.1

Found 1654 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTGGGGTAGCCAGGAGCCGGGCGGATGCCCTTGTACCGCAGCCTaGGCAGGTCTGCGACGTCCAGCTGCTCACTGCCACAGTAGGCCC +
Preference number: 1 (lower is better)
Translates to: GWGSQEPGGCPCTAA*AGLRRPAAHCHSRP
Trigger: GGGCCTACTGTGGCAGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTGCGGTACAAGGGCATCCGCCCGGCTCCTGGCTACCCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR GCA 90 bp GCCAGGAGCCGGGCGGATGCCCTTGTACCGCAGCCTGCGCAGGTCTaGGACGTCCAGCTGCTCACTGCCACAGTAGGCCCACAGTTCTCG +
Preference number: 1 (lower is better)
Translates to: ARSRADALVPQPAQV*DVQLLTATVGPQFS
Trigger: CGAGAACTGTGGGCCTACTGTGGCAGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTGCGGTACAAGGGCATCCGCCCGGCTCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR GCA 90 bp TTCTCGGCATTGCACTCTCCCTCCTGGCTTCCTCCAACCCACAGCTaGTCCCCTGCTGGCTCCCCCTCCTCCTCCTCCAGATTCTCTTCT +
Preference number: 1 (lower is better)
Translates to: FSALHSPSWLPPTHS*SPAGSPSSSSRFSS
Trigger: AGAAGAGAATCTGGAGGAGGAGGAGGGGGAGCCAGCAGGGGAGCAGCTGTGGGTTGGAGGAAGCCAGGAGGGAGAGTGCAATGCCGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp CCTTGTACCGCAGCCTGCGCAGGTCTGCGACGTCCAGCTGCTCACTaGCACAGTAGGCCCACAGTTCTCGGCGAACTCTTTCATGGAGCT +
Preference number: 1 (lower is better)
Translates to: PCTAACAGLRRPAAH*HSRPTVLGELFHGA
Trigger: AGCTCCATGAAAGAGTTCGCCGAGAACTGTGGGCCTACTGTGGCAGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTGCGGTACAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR TCA 90 bp GCTATGGGCTCTGCAGCCTGGGGCACAGCAGCCTCTGCGTACAGGTaGATGTCGTCTTGGATACTCTGTGCTGGCCAGAACCCAACCACA +
Preference number: 1 (lower is better)
Translates to: AMGSAAWGTAASAYR*MSSWILCAGQNPTT
Trigger: TGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGACGACATTCACCTGTACGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR GCA 90 bp TGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTaGTGGCAGCAGCAAGGATGCACCACTCTCCTGCCCCTCACCTTT +
Preference number: 1 (lower is better)
Translates to: WSSHPLIPQSLVSGH*WQQQGCTTLLPLTF
Trigger: AAAGGTGAGGGGCAGGAGAGTGGTGCATCCTTGCTGCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp ATTGCACTCTCCCTCCTGGCTTCCTCCAACCCACAGCTGCTCCCCTaGTGGCTCCCCCTCCTCCTCCTCCAGATTCTCTTCTCCTCATAT +
Preference number: 1 (lower is better)
Translates to: IALSLLASSNPQLLP*WLPLLLLQILFSSY
Trigger: ATATGAGGAGAAGAGAATCTGGAGGAGGAGGAGGGGGAGCCAGCAGGGGAGCAGCTGTGGGTTGGAGGAAGCCAGGAGGGAGAGTGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 90 bp TGCTGGCAGAGTCCTTCTCAGCCTGTTGCCTTAACCCATAGAAGGTaGCTATGGGCTCTGCAGCCTGGGGCACAGCAGCCTCTGCGTACA +
Preference number: 1 (lower is better)
Translates to: CWQSPSQPVALTHRR*LWALQPGAQQPLRT
Trigger: TGTACGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATGGGTTAAGGCAACAGGCTGAGAAGGACTCTGCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR TCA 90 bp GCCCAGGTAGTCACGGATGCCAGAATGCAAGGGAGCGATGAAGTCTaGGAGGCAGTAGTATGGCTCCGTGCTGGCAGAGTCCTTCTCAGC +
Preference number: 1 (lower is better)
Translates to: AQVVTDARMQGSDEV*EAVVWLRAGRVLLS
Trigger: GCTGAGAAGGACTCTGCCAGCACGGAGCCATACTACTGCCTCTCAGACTTCATCGCTCCCTTGCATTCTGGCATCCGTGACTACCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR GCA 90 bp CACAGCAGCCTCTGCGTACAGGTGAATGTCGTCTTGGATACTCTGTaGTGGCCAGAACCCAACCACACCCCGGGCCCGGAGTTTCTTTTG +
Preference number: 1 (lower is better)
Translates to: HSSLCVQVNVVLDTL*WPEPNHTPGPEFLL
Trigger: CAAAAGAAACTCCGGGCCCGGGGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGACGACATTCACCTGTACGCAGAGGCTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CCA 90 bp TCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTaGCAGCAGCAAGGATGCACCACTCTCCTGCCCCTCACCTTTCTA +
Preference number: 1 (lower is better)
Translates to: SSHPLIPQSLVSGHC*QQQGCTTLLPLTFL
Trigger: TAGAAAGGTGAGGGGCAGGAGAGTGGTGCATCCTTGCTGCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 90 bp CAGAGTCCTTCTCAGCCTGTTGCCTTAACCCATAGAAGGTGGCTATaGGCTCTGCAGCCTGGGGCACAGCAGCCTCTGCGTACAGGTGAA +
Preference number: 1 (lower is better)
Translates to: QSPSQPVALTHRRWL*ALQPGAQQPLRTGE
Trigger: TTCACCTGTACGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATGGGTTAAGGCAACAGGCTGAGAAGGACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR TCA 90 bp CTTTTTAAGAGGAGGCCAGAGAGCAAGCTTACCCTCCACCCACTGTaGGAACATGAGAAGCTGGCCGCTGCATCCCAGAAGAGGGCCCTC +
Preference number: 1 (lower is better)
Translates to: LFKRRPESKLTLHPL*EHEKLAAASQKRAL
Trigger: GAGGGCCCTCTTCTGGGATGCAGCGGCCAGCTTCTCATGTTCTCACAGTGGGTGGAGGGTAAGCTTGCTCTCTGGCCTCCTCTTAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp ATAGAAGGTGGCTATGGGCTCTGCAGCCTGGGGCACAGCAGCCTCTaGGTACAGGTGAATGTCGTCTTGGATACTCTGTGCTGGCCAGAA +
Preference number: 1 (lower is better)
Translates to: IEGGYGLCSLGHSSL*VQVNVVLDTLCWPE
Trigger: TTCTGGCCAGCACAGAGTATCCAAGACGACATTCACCTGTACGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CCA 90 bp GGGGGTGTAAAGAATCAGAGAGCCCACTCTTCCAGCTCTAGGAGGTaGGAACCAACCCGGCAGCCTGTGTTGCAGATGAATCCAGAGGAG +
Preference number: 1 (lower is better)
Translates to: GGVKNQRAHSSSSRR*EPTRQPVLQMNPEE
Trigger: CTCCTCTGGATTCATCTGCAACACAGGCTGCCGGGTTGGTTCCCACCTCCTAGAGCTGGAAGAGTGGGCTCTCTGATTCTTTACACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 90 bp AGCAGCCTCTGCGTACAGGTGAATGTCGTCTTGGATACTCTGTGCTaGCCAGAACCCAACCACACCCCGGGCCCGGAGTTTCTTTTGACT +
Preference number: 1 (lower is better)
Translates to: SSLCVQVNVVLDTLC*PEPNHTPGPEFLLT
Trigger: AGTCAAAAGAAACTCCGGGCCCGGGGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGACGACATTCACCTGTACGCAGAGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CCA 90 bp TCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTaGTATCTGGGCACTGCTGGCAGCAGCAAGGATGCACCACTCTCC +
Preference number: 1 (lower is better)
Translates to: SVLANGPAIHSFPKA*YLGTAGSSKDAPLS
Trigger: GGAGAGTGGTGCATCCTTGCTGCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp GCCCTCAGCAATCCCATTCCCAGGCCTCTTTGCAGCATTGGGTTCTaGTGGCATGCTTCGAAACGCTCTTCATTGCTTTCTCGGCATTGC +
Preference number: 1 (lower is better)
Translates to: ALSNPIPRPLCSIGF*WHASKRSSLLSRHC
Trigger: GCAATGCCGAGAAAGCAATGAAGAGCGTTTCGAAGCATGCCAGCAGAACCCAATGCTGCAAAGAGGCCTGGGAATGGGATTGCTGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp CTCACTGTGAGAAGGGCCCTCAGCAATCCCATTCCCAGGCCTCTTTaGAGCATTGGGTTCTGCTGGCATGCTTCGAAACGCTCTTCATTG +
Preference number: 1 (lower is better)
Translates to: LTVRRALSNPIPRPL*SIGFCWHASKRSSL
Trigger: CAATGAAGAGCGTTTCGAAGCATGCCAGCAGAACCCAATGCTGCAAAGAGGCCTGGGAATGGGATTGCTGAGGGCCCTTCTCACAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 90 bp GAGAAGGGCCCTCAGCAATCCCATTCCCAGGCCTCTTTGCAGCATTaGGTTCTGCTGGCATGCTTCGAAACGCTCTTCATTGCTTTCTCG +
Preference number: 1 (lower is better)
Translates to: EKGPQQSHSQASLQH*VLLACFETLFIAFS
Trigger: CGAGAAAGCAATGAAGAGCGTTTCGAAGCATGCCAGCAGAACCCAATGCTGCAAAGAGGCCTGGGAATGGGATTGCTGAGGGCCCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp TTTGCAGCATTGGGTTCTGCTGGCATGCTTCGAAACGCTCTTCATTaGTTTCTCGGCATTGCACTCTCCCTCCTGGCTTCCTCCAACCCA +
Preference number: 1 (lower is better)
Translates to: FAALGSAGMLRNALH*FLGIALSLLASSNP
Trigger: TGGGTTGGAGGAAGCCAGGAGGGAGAGTGCAATGCCGAGAAAGCAATGAAGAGCGTTTCGAAGCATGCCAGCAGAACCCAATGCTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp CAATCCCATTCCCAGGCCTCTTTGCAGCATTGGGTTCTGCTGGCATaGTTCGAAACGCTCTTCATTGCTTTCTCGGCATTGCACTCTCCC +
Preference number: 1 (lower is better)
Translates to: QSHSQASLQHWVLLA*FETLFIAFSALHSP
Trigger: GGGAGAGTGCAATGCCGAGAAAGCAATGAAGAGCGTTTCGAAGCATGCCAGCAGAACCCAATGCTGCAAAGAGGCCTGGGAATGGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp GGGGCAAATGGCTTCAGTGTTTCTGACAAGCAAGCAGTGAGCGCATaGCTTTTGCCAAAGGGAGTTCTGCAGCCATTTAGTCCAGCCTTT +
Preference number: 1 (lower is better)
Translates to: GANGFSVSDKQAVSA*LLPKGVLQPFSPAF
Trigger: AAAGGCTGGACTAAATGGCTGCAGAACTCCCTTTGGCAAAAGGCATGCGCTCACTGCTTGCTTGTCAGAAACACTGAAGCCATTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR GCA 90 bp GTTCTGGGATTACTTAGGGAGTGGTCCTTCCTGTCCCCACTGACTTaGCATGTCACCAGGTCATTTTGCAAAGGTCAACATATGCACGGG +
Preference number: 1 (lower is better)
Translates to: VLGLLREWSFLSPLT*HVTRSFCKGQHMHG
Trigger: CCCGTGCATATGTTGACCTTTGCAAAATGACCTGGTGACATGGCAAGTCAGTGGGGACAGGAAGGACCACTCCCTAAGTAATCCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR CCA 90 bp CTTGGACCATCTAGCATGCCATCATCCATGTTGACATCCAACACCTaGGCTCCCATTTCCACCTGCACTTTGGCAACACACAAGGCTTCT +
Preference number: 1 (lower is better)
Translates to: LGPSSMPSSMLTSNT*APISTCTLATHKAS
Trigger: AGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAACATGGATGATGGCATGCTAGATGGTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR CCA 90 bp AACAGCTGGGAACACACCACCACACTCTTGGACGCGTCCAGGACATaGATTACAGGTGCACTGTATCTCGGAGCTATTTTAACTGCTGTG +
Preference number: 1 (lower is better)
Translates to: NSWEHTTTLLDASRT*ITGALYLGAILTAV
Trigger: CACAGCAGTTAAAATAGCTCCGAGATACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGTGTTCCCAGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR TCA 90 bp ATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCATGTTaGCATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTGGCAA +
Preference number: 1 (lower is better)
Translates to: IWSLHLDHLACHHPC*HPTPGLPFPPALWQ
Trigger: TTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAACATGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR CCA 90 bp AACACTTGTAAGCCTACCAGGAGGAACCAGAACAGCTGCATAACTTaGCATCTACCTATGTGCTCCTGTCCCTTCCACTTCCTCCTTCTG +
Preference number: 1 (lower is better)
Translates to: NTCKPTRRNQNSCIT*HLPMCSCPFHFLLL
Trigger: CAGAAGGAGGAAGTGGAAGGGACAGGAGCACATAGGTAGATGCCAAGTTATGCAGCTGTTCTGGTTCCTCCTGGTAGGCTTACAAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 90 bp ACTTCCCTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTaGAGGAGTCGATGCACAAAGGTACCTTTGCGATGTCTGGCTCGG +
Preference number: 1 (lower is better)
Translates to: TSLGSTLTQLQSQQN*RSRCTKVPLRCLAR
Trigger: CCGAGCCAGACATCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR GCA 90 bp ACCAGGAGGAACCAGAACAGCTGCATAACTTGGCATCTACCTATGTaGTCCTGTCCCTTCCACTTCCTCCTTCTGTGGGTAATTACTATG +
Preference number: 1 (lower is better)
Translates to: TRRNQNSCITWHLPM*SCPFHFLLLWVITM
Trigger: CATAGTAATTACCCACAGAAGGAGGAAGTGGAAGGGACAGGAGCACATAGGTAGATGCCAAGTTATGCAGCTGTTCTGGTTCCTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp GTCCATGCCAGACTTGATTGCATGGTAAAGGAAAACCCCATGCATTaGTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTT +
Preference number: 1 (lower is better)
Translates to: VHARLDCMVKENPMH*FSNGFHSSEGEGQV
Trigger: AACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCCTTTACCATGCAATCAAGTCTGGCATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR TCA 90 bp CTTCACGGGACGGTAAAGAAAGTATCACTTGGGCCGCATCTAATATaGAATACTGAAGGTGGGTGTAGAGAGGGTGCTAGGGCTTTGATA +
Preference number: 1 (lower is better)
Translates to: LHGTVKKVSLGPHLI*NTEGGCREGARALI
Trigger: TATCAAAGCCCTAGCACCCTCTCTACACCCACCTTCAGTATTTCATATTAGATGCGGCCCAAGTGATACTTTCTTTACCGTCCCGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp CATATAGTAAACACTTGTAAGCCTACCAGGAGGAACCAGAACAGCTaGATAACTTGGCATCTACCTATGTGCTCCTGTCCCTTCCACTTC +
Preference number: 1 (lower is better)
Translates to: HIVNTCKPTRRNQNS*ITWHLPMCSCPFHF
Trigger: GAAGTGGAAGGGACAGGAGCACATAGGTAGATGCCAAGTTATGCAGCTGTTCTGGTTCCTCCTGGTAGGCTTACAAGTGTTTACTATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp TCAATGAGTAAGATATCAACCCCGCCATCCAGAAGTCCTTTGGCCTaGTCTTGGTATGCTTCAACAAGCTCATCAAATGCGTACTTCACC +
Preference number: 1 (lower is better)
Translates to: SMSKISTPPSRSPLA*SWYASTSSSNAYFT
Trigger: GGTGAAGTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGATATCTTACTCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
3UTR CCA 90 bp TACGGAAATATGAAATTATGGGAGGACGAAAATGCCCAGAAAGCATaGCTGCTTGACCACACTGGGGCAAATGGCTTCAGTGTTTCTGAC +
Preference number: 1 (lower is better)
Translates to: YGNMKLWEDENAQKA*LLDHTGANGFSVSD
Trigger: GTCAGAAACACTGAAGCCATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCCATAATTTCATATTTCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR CCA 90 bp AGTAAGATATCAACCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTaGTATGCTTCAACAAGCTCATCAAATGCGTACTTCACCTTGTAC +
Preference number: 1 (lower is better)
Translates to: SKISTPPSRSPLACS*YASTSSSNAYFTLY
Trigger: GTACAAGGTGAAGTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGATATCTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
3UTR TCA 90 bp GTTAAGTCTAACAGAGAACTAGATGAAGTTTCAGCAAGGGCTGTATaGAATGTGCATGGCGGTGTTACAGAGGCAAGAAGAGGGGTCACT +
Preference number: 1 (lower is better)
Translates to: VKSNRELDEVSARAV*NVHGGVTEARRGVT
Trigger: AGTGACCCCTCTTCTTGCCTCTGTAACACCGCCATGCACATTTCATACAGCCCTTGCTGAAACTTCATCTAGTTCTCTGTTAGACTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp TGCACAAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTaGAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCAT +
Preference number: 1 (lower is better)
Translates to: CTKVPLRCLARKQLS*KIWSLHLDHLACHH
Trigger: ATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR GCA 90 bp TCAGTGGCCTCAGGGTCTTTATTCCAGATGAGATCTTCACAGAGCTaGAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCA +
Preference number: 1 (lower is better)
Translates to: SVASGSLFQMRSSQS*RSSLWISSYTGRFP
Trigger: TGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTCTGTGAAGATCTCATCTGGAATAAAGACCCTGAGGCCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR CCA 90 bp TCCTCTCCTTCCTTCAGACTAATGCTATTGACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAG +
Preference number: 1 (lower is better)
Translates to: SSPSFRLMLLTMHFP*QHFNPASITAKLEE
Trigger: CTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCTGAAGGAAGGAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR TCA 90 bp TCCACAGCATTTAATTGGCAGAGACAGACCAGAGCTCAGGGCTTATaGGTTGTCTGTGAATTATTTACTCCTTCCAGCAATCTGCCTCTT +
Preference number: 1 (lower is better)
Translates to: STAFNWQRQTRAQGL*VVCELFTPSSNLPL
Trigger: AAGAGGCAGATTGCTGGAAGGAGTAAATAATTCACAGACAACTCATAAGCCCTGAGCTCTGGTCTGTCTCTGCCAATTAAATGCTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR TCA 90 bp CATAACGTAAGAGCTTCTCAGTGGCCTCAGGGTCTTTATTCCAGATaGGATCTTCACAGAGCTGCAGAAGTTCCTTATGGATATCATCAT +
Preference number: 1 (lower is better)
Translates to: HNVRASQWPQGLYSR*DLHRAAEVPYGYHH
Trigger: ATGATGATATCCATAAGGAACTTCTGCAGCTCTGTGAAGATCTCATCTGGAATAAAGACCCTGAGGCCACTGAGAAGCTCTTACGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR CCA 90 bp TCTTTATTCCAGATGAGATCTTCACAGAGCTGCAGAAGTTCCTTATaGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCC +
Preference number: 1 (lower is better)
Translates to: SLFQMRSSQSCRSSL*ISSYTGRFPAFTIP
Trigger: GGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTCTGTGAAGATCTCATCTGGAATAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR TCA 90 bp GGCTTCTTCATAGTTTCCTGCCATGATGAGTTTAGCAAACTTCCTTaGTCCTGCAACATTACAGCGCTCTCCAATGTTAACAAAGTTGGT +
Preference number: 1 (lower is better)
Translates to: GFFIVSCHDEFSKLP*SCNITALSNVNKVG
Trigger: ACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACTCATCATGGCAGGAAACTATGAAGAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR TCA 90 bp CTGAATATATTGAGAATTGAGGGGAATAAAATGGTAAGAAATGAGTaGCTTTATGCTGCCCACTTGTCCAACTCCGCACGGGATATCAGA +
Preference number: 1 (lower is better)
Translates to: LNILRIEGNKMVRNE*LYAAHLSNSARDIR
Trigger: TCTGATATCCCGTGCGGAGTTGGACAAGTGGGCAGCATAAAGTCACTCATTTCTTACCATTTTATTCCCCTCAATTCTCAATATATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR TCA 90 bp CGCCAGATGTATTACATTTACCTTATGGATGGCAGAGATTGTCTGTaGTCAACAGCATTTGTGACTCTGTCTAGTTCTTGTTTCTTCCAT +
Preference number: 1 (lower is better)
Translates to: RQMYYIYLMDGRDCL*STAFVTLSSSCFFH
Trigger: ATGGAAGAAACAAGAACTAGACAGAGTCACAAATGCTGTTGATCACAGACAATCTCTGCCATCCATAAGGTAAATGTAATACATCTGGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp CAAGTCCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTaGAAATCTTATGGATATAAAATGGAATCTCATTGTGGTCCTAAT +
Preference number: 1 (lower is better)
Translates to: QVPTDLTTGTVRPNL*KSYGYKMESHCGPN
Trigger: ATTAGGACCACAATGAGATTCCATTTTATATCCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGGACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR GCA 90 bp AGGGCTTATGAGTTGTCTGTGAATTATTTACTCCTTCCAGCAATCTaGCTCTTTCCATATAGAAGTTCTTTCTCTGGAGAATCTGATTCT +
Preference number: 1 (lower is better)
Translates to: RAYELSVNYLLLPAI*LFPYRSSFSGESDS
Trigger: AGAATCAGATTCTCCAGAGAAAGAACTTCTATATGGAAAGAGGCAGATTGCTGGAAGGAGTAAATAATTCACAGACAACTCATAAGCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR CCA 90 bp CTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGATATAAAATaGAATCTCATTGTGGTCCTAATTCATATTTCCCTGACCAATGCT +
Preference number: 1 (lower is better)
Translates to: LVLSDPTFANLMDIK*NLIVVLIHISLTNA
Trigger: AGCATTGGTCAGGGAAATATGAATTAGGACCACAATGAGATTCCATTTTATATCCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR CCA 90 bp GATGGTGTTACTGACTGGCAGAAGAAATTCAGTCTCCCTGGAAGTTaGGTTAAAATAATTGTTTTTAAAGACTTCTGCACTATCTGCAAC +
Preference number: 1 (lower is better)
Translates to: DGVTDWQKKFSLPGS*VKIIVFKDFCTICN
Trigger: GTTGCAGATAGTGCAGAAGTCTTTAAAAACAATTATTTTAACCCAACTTCCAGGGAGACTGAATTTCTTCTGCCAGTCAGTAACACCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 90 bp TGCAGCCTGGGGCACAGCAGCCTCTGCGTACAGGTGAATGTCGTCTaGGATACTCTGTGCTGGCCAGAACCCAACCACACCCCGGGCCCG +
Preference number: 2 (lower is better)
Translates to: CSLGHSSLCVQVNVV*DTLCWPEPNHTPGP
Trigger: CGGGCCCGGGGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGACGACATTCACCTGTACGCAGAGGCTGCTGTGCCCCAGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTCCCAGAAAGCATGGCTaGTTGACCACACTGGGGCAA +
Preference number: 2 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTPRKHG*LTTLGQ
Trigger: TTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGG...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR CCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTAATGCCCAGAAAGCATaGCTGCTTGACCACACTGGG +
Preference number: 2 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTNAQKA*LLDHTG
Trigger: CCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATT...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR CCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTGCCTCTTTGCAGCATTaGGTTCTGCTGGCATGCTTC +
Preference number: 2 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTASLQH*VLLACF
Trigger: GAAGCATGCCAGCAGAACCCAATGCTGCAAAGAGGC...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCATATCAGAGCCCAGCTaGGAACCTGCTCAATCCTGG +
Preference number: 2 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSISEPS*EPAQSW
Trigger: CCAGGATTGAGCAGGTTCTCAGCTGGGCTCTGATAT...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTGGCAGCAGCAAGGATaGACCACTCTCCTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMWQQQG*TTLLPL
Trigger: GAGGGGCAGGAGAGTGGTGCATCCTTGCTGCTGCCA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGAGCATTTTGGGAGGCTaGGGTGGGCAGATCACGAGG +
Preference number: 2 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMSILGG*GGQITR
Trigger: CCTCGTGATCTGCCCACCTCAGCCTCCCAAAATGCT...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR CCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATTTGGGAGGCTGAGGTaGGCAGATCACGAGGTCGGG +
Preference number: 2 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVFGRLR*ADHEVG
Trigger: CCCGACCTCGTGATCTGCCCACCTCAGCCTCCCAAA...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGCATAGAAGGTGGCTATaGGCTCTGCAGCCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMHRRWL*ALQPGA
Trigger: TGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATG...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR TCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTCAGGTTGACTTGCTTTaGAATCAAACGACCTCTGTC +
Preference number: 2 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTQVDLL*NQTTSV
Trigger: GACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTG...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR TCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTACCTTCCTGTCCCCACTaGCTTGCCATGTCACCAGGT +
Preference number: 2 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVPSCPH*LAMSPG
Trigger: ACCTGGTGACATGGCAAGTCAGTGGGGACAGGAAGG...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp CACTGCCACAGTAGGCCCACAGTTCTCGGCGAACTCTTTCATGGAGCTCTTCTGCCCAGAAAGCATGGCTaGTTGACCACACTGGGGCAA +
Preference number: 2 (lower is better)
Translates to: HCHSRPTVLGELFHGALLPRKHG*LTTLGQ
Trigger: TTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGG...CAGAAGAGCTCCATGAAAGAGTTCGCCGAGAACTGTGGGCCTACTGTGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGCCCAGAAAGCATGGCTaGTTGACCACACTGGGGCAA +
Preference number: 2 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMPRKHG*LTTLGQ
Trigger: TTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGG...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR CAA 90 bp CTTTGCAGCATTGGGTTCTGCTGGCATGCTTCGAAACGCTCTTCATaGCTTTCTCGGCATTGCACTCTCCCTCCTGGCTTCCTCCAACCC +
Preference number: 2 (lower is better)
Translates to: LCSIGFCWHASKRSS*LSRHCTLPPGFLQP
Trigger: GGGTTGGAGGAAGCCAGGAGGGAGAGTGCAATGCCGAGAAAGCAATGAAGAGCGTTTCGAAGCATGCCAGCAGAACCCAATGCTGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAAAGGAACCCTGCTCACTaGTCTTCACGCAAGGTCCCA +
Preference number: 2 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQRNPAH*SSRKVP
Trigger: TGGGACCTTGCGTGAAGAGCAGTGAGCAGGGTTCCT...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 90 bp TATATCCTAGGTCACGGGGAGATGGTTATTCAGGCAGCAGGAGGATaGAGGCGGGGGTGTAAAGAATCAGAGAGCCCACTCTTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: YILGHGEMVIQAAGG*RRGCKESESPLFQL
Trigger: GAGCTGGAAGAGTGGGCTCTCTGATTCTTTACACCCCCGCCTCAATCCTCCTGCTGCCTGAATAACCATCTCCCCGTGACCTAGGATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 90 bp CTGTGCTGGCCAGAACCCAACCACACCCCGGGCCCGGAGTTTCTTTaGACTAATCAGTGTGTTCAGCATATTGTGGGCATCATCGTAGAC +
Preference number: 2 (lower is better)
Translates to: LCWPEPNHTPGPEFL*TNQCVQHIVGIIVD
Trigger: GTCTACGATGATGCCCACAATATGCTGAACACACTGATTAGTCAAAAGAAACTCCGGGCCCGGGGTGTGGTTGGGTTCTGGCCAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR TCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCATGGTAAGAAATGAGTaGCTTTATGCTGCCCACTTG +
Preference number: 2 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSMVRNE*LYAAHL
Trigger: CAAGTGGGCAGCATAAAGTCACTCATTTCTTACCAT...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTTGAGGCTTGTTGCTTaGGTGGTGGCACCATTCTTC +
Preference number: 2 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMLRLVA*VVAPFF
Trigger: GAAGAATGGTGCCACCACTCAAGCAACAAGCCTCAA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR CCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCTTGTTGCTTGAGTGGTaGCACCATTCTTCATTACTG +
Preference number: 2 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSLLLEW*HHSSLL
Trigger: CAGTAATGAAGAATGGTGCCACCACTCAAGCAACAA...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp CATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCAGTATGGCTCCGTGCTaGCAGAGTCCTTCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: HDAAVVVTIILIGLAQLFSMAPC*QSPSQP
Trigger: AGGCTGAGAAGGACTCTGCCAGCACGGAGCCATACT...GAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTCCACTTAGATTAAAATaGCCCATTTCTCACAGTATC +
Preference number: 2 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTPLRLK*PISHSI
Trigger: GATACTGTGAGAAATGGGGCATTTTAATCTAAGTGG...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTACCACATGCAAGAGTTTaGTGGACATACAGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVPHARV*WTYRWE
Trigger: CTCCCACCTGTATGTCCAGCAAACTCTTGCATGTGG...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGCTCCTAGTGGCCACATaGAAGAGTTTGCTGGACATA +
Preference number: 2 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMLLVAT*KSLLDI
Trigger: TATGTCCAGCAAACTCTTGCATGTGGCCACTAGGAG...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACTACTTGCCCCGGAGCTaGCAGACATCAAAGAAAGGC +
Preference number: 2 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYYLPRS*QTSKKG
Trigger: GCCTTTCTTTGATGTCTGGCAGCTCCGGGGCAAGTA...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGACCAAAGCCTGGTATCTaGGCACTGCTGGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: REFCSHLVQPLENEVFRRPKPGI*ALLAAA
Trigger: TGCTGCTGCCAGCAGTGCCCAGATACCAGGCTTTGG...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp GAAGGAGTGATGAGTCCTGACAGGCCAATTATATCTGCTTTGTGGTCAAGAGCACAGTGGCCAGCACGATaGTGCCCTGGTAAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: EGVMSPDRPIISALWSRAQWPAR*CPGKGP
Trigger: AGGACCCTTACCAGGGCACCATCGTGCTGGCCACTG...TGCTCTTGACCACAAAGCAGATATAATTGGCCTGTCAGGACTCATCACTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR TCA 90 bp TGTTTTTCAATGCCCTTCACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCATGCCATCATCCATGTTaGCATCCAACACCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: CFSMPFTRAYSRRSSTGPCHHPC*HPTPGL
Trigger: GAGCCCAGGTGTTGGATGTCAACATGGATGATGGCA...TGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTGAAGGGCATTGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR TCA 90 bp GTCATAGTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGCCCGGGTGCACACTCTaGTTTTTGTGTCTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: VIVFKDLGPNKRGLHWVRPGCTL*FLCLFL
Trigger: CAGAAACAGACACAAAAATCAGAGTGTGCACCCGGG...CCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGACTATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp AGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGACTGCAGGAAGACCCTaGTCCTCTACAAGGTTCCAC +
Preference number: 2 (lower is better)
Translates to: REVSSIHYPHVHARLDCMTAGRP*SSTRFH
Trigger: GTGGAACCTTGTAGAGGAGCAGGGTCTTCCTGCAGT...CATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGAAACCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTCTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFLFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp GAGTCGATGCACAAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGAGGAACCCTGCTCACTaGTCTTCACGCAAGGTCCCA +
Preference number: 2 (lower is better)
Translates to: ESMHKGTFAMSGSEAIKLRNPAH*SSRKVP
Trigger: TGGGACCTTGCGTGAAGAGCAGTGAGCAGGGTTCCT...CAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCATCGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp TTAAATATCTTGGGAAAGCCTCGATTCGGGTACTTGCCCCGGAGCTGCCAGACACAAGCAGTGAGCGCATaGCTTTTGCCAAAGGGAGTT +
Preference number: 2 (lower is better)
Translates to: LNILGKPRFGYLPRSCQTQAVSA*LLPKGV
Trigger: AACTCCCTTTGGCAAAAGGCATGCGCTCACTGCTTG...TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGGCTTTCCCAAGATATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR GCA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACATGGGAGGACGAAAATaGCCAGAAAGCATGGCTGCT +
Preference number: 2 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYMGGRK*PESMAA
Trigger: AGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCCAT...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTGTCAGACCCAACCTTTaGAAATCTTATGGATATAAA +
Preference number: 2 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTVRPNL*KSYGYK
Trigger: TTTATATCCATAAGATTTGCAAAGGTTGGGTCTGAC...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATTGGCAGCAGCAAGGATaGACCACTCTCCTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHWQQQG*TTLLPL
Trigger: GAGGGGCAGGAGAGTGGTGCATCCTTGCTGCTGCCA...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTAAGAAAAAGATGACATaGTTGAGTTTGAGGCTTGTT +
Preference number: 2 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTKKKMT*LSLRLV
Trigger: AACAAGCCTCAAACTCAACCATGTCATCTTTTTCTT...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR CAA 90 bp AATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCATGTaGACATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTGGCA +
Preference number: 2 (lower is better)
Translates to: NLVIALGPSSMPSSM*TSNTWAPISTCTLA
Trigger: TGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAACATGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR CAA 90 bp CACTTCCCTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATaGGAGGAGTCGATGCACAAAGGTACCTTTGCGATGTCTGGCTCG +
Preference number: 2 (lower is better)
Translates to: HFPWQHFNPASITAK*EESMHKGTFAMSGS
Trigger: CGAGCCAGACATCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR TCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGATGGCTTCAGTGTTTCTaGCAAGCAAGCAGTGAGCGC +
Preference number: 2 (lower is better)
Translates to: REFCSHLVQPLENEVFRRWLQCF*QASSER
Trigger: GCGCTCACTGCTTGCTTGTCAGAAACACTGAAGCCA...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR TCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGAGCATTTTGGGAGGCTaGGGTGGGCAGATCACGAGG +
Preference number: 2 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWSILGG*GGQITR
Trigger: CCTCGTGATCTGCCCACCTCAGCCTCCCAAAATGCT...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATACAGAGGGGCCAATGTaGGCAGGTACCTCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHTEGPM*AGTSFR
Trigger: CCTGAAGGAGGTACCTGCTCACATTGGCCCCTCTGT...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATGTTGGGAAGCTTTCCTaGCTTGGGTGGAACCGGGGT +
Preference number: 2 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHVGKLS*LGWNRG
Trigger: ACCCCGGTTCCACCCAAGTCAGGAAAGCTTCCCAAC...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp TGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAATGCCATCATCCATGTTaGCATCCAACACCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: CIASRMASIPRKEKDKLECHHPC*HPTPGL
Trigger: GAGCCCAGGTGTTGGATGTCAACATGGATGATGGCA...TTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR-3UTR GCA 90 bp ATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: IASRMASIPRKEKDKLERLFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...TCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTACATACAGGTGGGAGTTaGAAGCAAGATCATAACGTC +
Preference number: 2 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVHTGGS*KQDHNV
Trigger: GACGTTATGATCTTGCTTCCAACTCCCACCTGTATG...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp CAAATCCCTCTCCTGTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATCGCATCCAGAAGTCCTTTaGCCTGCTCTTGGTATGCTT +
Preference number: 2 (lower is better)
Translates to: QIPLLSVRKESAHFYQRSHPEVL*PALGML
Trigger: AAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATG...CGATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGACAGGAGAGGGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
3UTR-3UTR TCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTCAGGTTGACTTGCTTTaGAATCAAACGACCTCTGTC +
Preference number: 2 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCQVDLL*NQTTSV
Trigger: GACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTG...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR TCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAAAGGGGTACGGAAATATaGAATTATGGGAGGACGAAA +
Preference number: 2 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQRGTEI*NYGRTK
Trigger: TTTCGTCCTCCCATAATTTCATATTTCCGTACCCCT...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTTTGAGGCTTGTTGCTTaGGTGGTGGCACCATTCTTC +
Preference number: 2 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFLRLVA*VVAPFF
Trigger: GAAGAATGGTGCCACCACTCAAGCAACAAGCCTCAA...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp GTCATAGTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGAATGTTACCTTCTCCTaGCTATTGCCACCACCATCT +
Preference number: 2 (lower is better)
Translates to: VIVFKDLGPNKRGLHWVRNVTFS*LLPPPS
Trigger: AGATGGTGGTGGCAATAGTCAGGAGAAGGTAACATT...CCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGACTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR TCA 90 bp ACAGAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCTGTACGGTCCAATCCTaGAGGGCTCTAGACCAGACA +
Preference number: 2 (lower is better)
Translates to: TELQKFLMDIIIHREVSSCTVQS*RALDQT
Trigger: TGTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACA...GCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR-3UTR TCA 90 bp TTAAATATCTTGGGAAAGCCTCGATTCGGGTACTTGCCCCGGAGCTGCCAGACAAGTATCTCCTCTCCTTaGGAGACTCATAATGGTCCT +
Preference number: 2 (lower is better)
Translates to: LNILGKPRFGYLPRSCQTSISSP*ETHNGP
Trigger: AGGACCATTATGAGTCTCTCAAGGAGAGGAGATACT...TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGGCTTTCCCAAGATATTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPLFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCCTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPILFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGAGGAACCCTGCTCACTaGTCTTCACGCAAGGTCCCA +
Preference number: 2 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWRNPAH*SSRKVP
Trigger: TGGGACCTTGCGTGAAGAGCAGTGAGCAGGGTTCCT...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp CCAATGTTAACAAAGTTGGTGTACGGTCCAATCCTGAAGGGCTCTAGACCAGACGGTGTTGGGAAGACCTaGATTGGGATAACAGAGGAC +
Preference number: 2 (lower is better)
Translates to: PMLTKLVYGPILKGSRPDGVGKT*IGITED
Trigger: GTCCTCTGTTATCCCAATGCAGGTCTTCCCAACACC...GTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACACCAACTTTGTTAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463959.1
3UTR-3UTR GCA 90 bp GGCATCATCGTAGACCTTCCTGGCCTCTCCACCTACTGTTTTGTCGTTAAATATGCACAAAGGTACCTTTaGGATGTCTGGCTCGGAAGC +
Preference number: 2 (lower is better)
Translates to: GIIVDLPGLSTYCFVVKYAQRYL*DVWLGS
Trigger: GCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGC...ATATTTAACGACAAAACAGTAGGTGGAGAGGCCAGGAAGGTCTACGATGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp CACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCATTTCTCCACTCATCAGTAATTGGAGGAGTCGATaGACAAAGGTACCTTTGCGA +
Preference number: 2 (lower is better)
Translates to: HKGILKAFFDRAISPLISNWRSR*TKVPLR
Trigger: TCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATT...ACTGATGAGTGGAGAAATGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp TTAAATATCTTGGGAAAGCCTCGATTCGGGTACTTGCCCCGGAGCTGCCAGACACATGCCAGACTTGATTaGATGGTAAAGGAAAACCCC +
Preference number: 2 (lower is better)
Translates to: LNILGKPRFGYLPRSCQTHARLD*MVKENP
Trigger: GGGGTTTTCCTTTACCATGCAATCAAGTCTGGCATG...TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGGCTTTCCCAAGATATTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAAATAGTACGCCCCATGTaGTCTCTTCAAACTTGCTTT +
Preference number: 2 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQIVRPM*SLQTCF
Trigger: AAAGCAAGTTTGAAGAGACCACATGGGGCGTACTAT...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 90 bp GCCTTCTCCAAGAAGTCGTCCTCTCCTTCCTTCAGACTAATGCTATaGACAATGCACTTCCCTTGGCAGCACTTTAACCCAGCTTCAATC +
Preference number: 2 (lower is better)
Translates to: AFSKKSSSPSFRLML*TMHFPWQHFNPASI
Trigger: GATTGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCTGAAGGAAGGAGAGGACGACTTCTTGGAGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR CAA 90 bp ATAACTCGGAAATTATTGCAGCCAAGGACTACTCCAACTATGTTCTaGCCTATGTCGTGCACGTCGCCTTTAACAGTGGCCAGCACGATG +
Preference number: 2 (lower is better)
Translates to: ITRKLLQPRTTPTMF*PMSCTSPLTVASTM
Trigger: CATCGTGCTGGCCACTGTTAAAGGCGACGTGCACGACATAGGCAAGAACATAGTTGGAGTAGTCCTTGGCTGCAATAATTTCCGAGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR TCA 90 bp AGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCTGGCTTCAGTGTTTCTaGCAAGCAAGCAGTGAGCGC +
Preference number: 2 (lower is better)
Translates to: SSLWISSYTGRFPAFTIPWLQCF*QASSER
Trigger: GCGCTCACTGCTTGCTTGTCAGAAACACTGAAGCCA...GGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR TCA 90 bp CATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTCCTGGCTAACACAGTaGAATCCTGTCTCTACTTTT +
Preference number: 2 (lower is better)
Translates to: HDAAVVVTIILIGLAQLFSWLTQ*NPVSTF
Trigger: AAAAGTAGAGACAGGATTTCACTGTGTTAGCCAGGA...GAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR TCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGATATCAGAGCCCAGCTaGGAACCTGCTCAATCCTGG +
Preference number: 2 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWISEPS*EPAQSW
Trigger: CCAGGATTGAGCAGGTTCTCAGCTGGGCTCTGATAT...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATATATCAGAGCCCAGCTaGGAACCTGCTCAATCCTGG +
Preference number: 2 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHISEPS*EPAQSW
Trigger: CCAGGATTGAGCAGGTTCTCAGCTGGGCTCTGATAT...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp CTCAACCTCAGCCACAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCATATCAGAGCCCAGCTaGGAACCTGCTCAATCCTGG +
Preference number: 2 (lower is better)
Translates to: LNLSHRYVLPQCIILNLIISEPS*EPAQSW
Trigger: CCAGGATTGAGCAGGTTCTCAGCTGGGCTCTGATAT...GATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTGTGGCTGAGGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR TCA 90 bp CATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCATGGTAAGAAATGAGTaGCTTTATGCTGCCCACTTG +
Preference number: 2 (lower is better)
Translates to: HDAAVVVTIILIGLAQLFMVRNE*LYAAHL
Trigger: CAAGTGGGCAGCATAAAGTCACTCATTTCTTACCAT...GAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR TCA 90 bp CATGGTAAAGGAAAACCCCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAGCAATTTCCCTGATATaGTCTGGTGTTGACCCACAG +
Preference number: 2 (lower is better)
Translates to: HGKGKPHALLLEWLPFLGAISLI*SGVDPQ
Trigger: CTGTGGGTCAACACCAGATCATATCAGGGAAATTGC...TCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCCTTTACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCACTGCAGGAAGACCCTaGTCCTCTACAAGGTTCCAC +
Preference number: 2 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPTAGRP*SSTRFH
Trigger: GTGGAACCTTGTAGAGGAGCAGGGTCTTCCTGCAGT...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp AAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCACTGCAGGAAGACCCTaGTCCTCTACAAGGTTCCAC +
Preference number: 2 (lower is better)
Translates to: KGTFAMSGSEAIKLQNLVTAGRP*SSTRFH
Trigger: GTGGAACCTTGTAGAGGAGCAGGGTCTTCCTGCAGT...GACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp CATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAATTGGAGGAGTCGATaGACAAAGGTACCTTTGCGA +
Preference number: 2 (lower is better)
Translates to: HALLLEWLPFLGRRRTSWNWRSR*TKVPLR
Trigger: TCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATT...CCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp GACAAATCCCTCTCCTGTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATAGAAGTCCTTTGGCCTaGTCTTGGTATGCTTCAACA +
Preference number: 2 (lower is better)
Translates to: DKSLSCLSGKSPPTFINDRSPLA*SWYAST
Trigger: TGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCT...ATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGACAGGAGAGGGATTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
3UTR-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTTTGGGAGGCTGAGGTaGGCAGATCACGAGGTCGGG +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFFGRLR*ADHEVG
Trigger: CCCGACCTCGTGATCTGCCCACCTCAGCCTCCCAAA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR CCA 90 bp GTCATAGTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGTTGTTGCTTGAGTGGTaGCACCATTCTTCATTACTG +
Preference number: 2 (lower is better)
Translates to: VIVFKDLGPNKRGLHWVRLLLEW*HHSSLL
Trigger: CAGTAATGAAGAATGGTGCCACCACTCAAGCAACAA...CCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGACTATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR CCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAACACTTCCTCCTTCTGTaGGTAATTACTATGCTCAAT +
Preference number: 2 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQHFLLL*VITMLN
Trigger: ATTGAGCATAGTAATTACCCACAGAAGGAGGAAGTG...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp TCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGCTCCAGGAAAAGCAGTGGCAGGTaGAACTCTAGGCTTACAATT +
Preference number: 2 (lower is better)
Translates to: SSEGEGQVGKTSTYSGSRKSSGR*NSRLTI
Trigger: AATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTT...CCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR CAA 90 bp TTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGTTAACAAAGTaGGTGTACGGTCCAATCCTGAAGGGCTCTAGACCAGACAGTAAC +
Preference number: 2 (lower is better)
Translates to: FLDPATLQRSPMLTK*VYGPILKGSRPDSN
Trigger: GTTACTGTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR-3UTR TCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGACAGGTTGACTTGCTTTaGAATCAAACGACCTCTGTC +
Preference number: 2 (lower is better)
Translates to: REFCSHLVQPLENEVFRRQVDLL*NQTTSV
Trigger: GACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTG...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR TCA 90 bp TCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTACAATTTTTCACAGCTTCGATATGATCTGGTGTTaGCCCACAGCATCCTCCAAC +
Preference number: 2 (lower is better)
Translates to: SFKSSGRWNSRLTIFHSFDMIWC*PTASSN
Trigger: GTTGGAGGATGCTGTGGGTCAACACCAGATCATATC...GAAGCTGTGAAAAATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463959.1
3UTR-3UTR TCA 90 bp GACCATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCGTCCTTCAATTATATTaGGAGGTCGGGGATATTTTT +
Preference number: 2 (lower is better)
Translates to: DHDAAVVVTIILIGLAQLVLQLY*EVGDIF
Trigger: AAAAATATCCCCGACCTCTCAATATAATTGAAGGAC...GAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp GGCATCATCGTAGACCTTCCTGGCCTCTCCACCTACTGTTTTGTCGTTAAATATGAGTTTGAGGCTTGTTaGTTGAGTGGTGGCACCATT +
Preference number: 2 (lower is better)
Translates to: GIIVDLPGLSTYCFVVKYEFEAC*LSGGTI
Trigger: AATGGTGCCACCACTCAAGCAACAAGCCTCAAACTC...ATATTTAACGACAAAACAGTAGGTGGAGAGGCCAGGAAGGTCTACGATGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR GCA 90 bp CTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGGCAAAATCCTTTAGGTaGTTGGCCATCATAGAAGGC +
Preference number: 2 (lower is better)
Translates to: LPFLGRRRTSWKDLHLFWAKSFR*LAIIEG
Trigger: GCCTTCTATGATGGCCAAGCACCTAAAGGATTTTGC...CCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463959.1
3UTR-3UTR CCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGACATACAGGTGGGAGTTaGAAGCAAGATCATAACGTC +
Preference number: 2 (lower is better)
Translates to: REFCSHLVQPLENEVFRRHTGGS*KQDHNV
Trigger: GACGTTATGATCTTGCTTCCAACTCCCACCTGTATG...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTTGTATGAAATGTGCATaGCGGTGTTACAGAGGCAAG +
Preference number: 2 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFCMKCA*RCYRGK
Trigger: CTTGCCTCTGTAACACCGCCATGCACATTTCATACA...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp GGAAATCTTCCCCACAGCAAAATATTTGGACTTCAAATTGGAGAAGTAGAGGCCAAACGTGGGCTTCACTaGGTGAGGTTCAGACAGCCA +
Preference number: 2 (lower is better)
Translates to: GNLPHSKIFGLQIGEVEAKRGLH*VRFRQP
Trigger: TGGCTGTCTGAACCTCACCCAGTGAAGCCCACGTTT...GGCCTCTACTTCTCCAATTTGAAGTCCAAATATTTTGCTGTGGGGAAGATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CAA 90 bp ATGCACAAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTaGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCA +
Preference number: 2 (lower is better)
Translates to: MHKGTFAMSGSEAIK*QNLVIALGPSSMPS
Trigger: TGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR-3UTR TCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTGTACGGTCCAATCCTaGAGGGCTCTAGACCAGACA +
Preference number: 2 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQACTVQS*RALDQT
Trigger: TGTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR GCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTACTGCAGGAAGACCCTaGTCCTCTACAAGGTTCCAC +
Preference number: 2 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQATAGRP*SSTRFH
Trigger: GTGGAACCTTGTAGAGGAGCAGGGTCTTCCTGCAGT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTAGGAACCCTGCTCACTaGTCTTCACGCAAGGTCCCA +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFRNPAH*SSRKVP
Trigger: TGGGACCTTGCGTGAAGAGCAGTGAGCAGGGTTCCT...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTAGGAACCCTGCTCACTaGTCTTCACGCAAGGTCCCA +
Preference number: 2 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSRNPAH*SSRKVP
Trigger: TGGGACCTTGCGTGAAGAGCAGTGAGCAGGGTTCCT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATGACTTCTGCACTATCTaGAACCCTCTGTACTTGTGC +
Preference number: 2 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHDFCTI*NPLYLC
Trigger: GCACAAGTACAGAGGGTTGCAGATAGTGCAGAAGTC...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp ATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGAAATTGGAGGAGTCGATaGACAAAGGTACCTTTGCGA +
Preference number: 2 (lower is better)
Translates to: IASRMASIPRKEKDKLERNWRSR*TKVPLR
Trigger: TCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATT...TCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp GGAAATCTTCCCCACAGCAAAATATTTGGACTTCAAATTGGAGAAGTAGAGGCCCTCCAACTATGTTCTTaGCTATGTCGTGCACGTCGC +
Preference number: 2 (lower is better)
Translates to: GNLPHSKIFGLQIGEVEALQLCS*LCRARR
Trigger: GCGACGTGCACGACATAGGCAAGAACATAGTTGGAG...GGCCTCTACTTCTCCAATTTGAAGTCCAAATATTTTGCTGTGGGGAAGATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CCA 90 bp CCTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGAAAAAGACGACTAAGTaGCCTCCTAGATTCCACTGT +
Preference number: 2 (lower is better)
Translates to: PWQHFNPASITAKLEESMKKTTK*PPRFHC
Trigger: ACAGTGGAATCTAGGAGGCCACTTAGTCGTCTTTTT...CATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGAATGCCCAGAAAGCATaGCTGCTTGACCACACTGGG +
Preference number: 2 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGNAQKA*LLDHTG
Trigger: CCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATT...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR CCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATCATGCAAGAGTTTGCTaGACATACAGGTGGGAGTTG +
Preference number: 2 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHHARVC*TYRWEL
Trigger: CAACTCCCACCTGTATGTCCAGCAAACTCTTGCATG...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAATAGTACGCCCCATGTaGTCTCTTCAAACTTGCTTT +
Preference number: 2 (lower is better)
Translates to: REFCSHLVQPLENEVFRRIVRPM*SLQTCF
Trigger: AAAGCAAGTTTGAAGAGACCACATGGGGCGTACTAT...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp TCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTACAATTTTTCACAGCTTCTGGGAAGACCTGCATTaGGATAACAGAGGACATAGG +
Preference number: 2 (lower is better)
Translates to: SFKSSGRWNSRLTIFHSFWEDLH*DNRGHR
Trigger: CCTATGTCCTCTGTTATCCCAATGCAGGTCTTCCCA...GAAGCTGTGAAAAATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463959.1
3UTR-3UTR CCA 90 bp TATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCAACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCT +
Preference number: 2 (lower is better)
Translates to: YGYHHTQGGFQHSLSPCPTMHFP*QHFNPA
Trigger: AGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGT...TGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CCA 90 bp GGAAATCTTCCCCACAGCAAAATATTTGGACTTCAAATTGGAGAAGTAGAGGCCGCATTGCTTCTCGAATaGCTTCCATTCCTCGGAAGG +
Preference number: 2 (lower is better)
Translates to: GNLPHSKIFGLQIGEVEAALLLE*LPFLGR
Trigger: CCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGC...GGCCTCTACTTCTCCAATTTGAAGTCCAAATATTTTGCTGTGGGGAAGATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CCA 90 bp TTAAATATCTTGGGAAAGCCTCGATTCGGGTACTTGCCCCGGAGCTGCCAGACAATTTTAACTGCTGTGTaGGTTTTTGAAGTGGTTGCT +
Preference number: 2 (lower is better)
Translates to: LNILGKPRFGYLPRSCQTILTAV*VFEVVA
Trigger: AGCAACCACTTCAAAAACCCACACAGCAGTTAAAAT...TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGGCTTTCCCAAGATATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CAA 90 bp ATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTaGGAAAGACCTCCACTTATTCTGGCTCCAGGTAATGTTTCTTTA +
Preference number: 2 (lower is better)
Translates to: IASRMASIPRKEKDK*ERPPLILAPGNVSL
Trigger: TAAAGAAACATTACCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR CAA 90 bp ATAGTTTCAATGAGTAAGATATCAACCCCGCCATCCAGAAGTCCTTaGGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAATGCGTAC +
Preference number: 2 (lower is better)
Translates to: IVSMSKISTPPSRSP*ACSWYASTSSSNAY
Trigger: GTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGATATCTTACTCATTGAAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
3UTR CAA 90 bp CAGCATTTAATTGGCAGAGACAGACCAGAGCTCAGGGCTTATGAGTaGTCTGTGAATTATTTACTCCTTCCAGCAATCTGCCTCTTTCCA +
Preference number: 2 (lower is better)
Translates to: QHLIGRDRPELRAYE*SVNYLLLPAICLFP
Trigger: TGGAAAGAGGCAGATTGCTGGAAGGAGTAAATAATTCACAGACAACTCATAAGCCCTGAGCTCTGGTCTGTCTCTGCCAATTAAATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR TCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCAATGTTACCTTCTCCTaGCTATTGCCACCACCATCT +
Preference number: 2 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPINVTFS*LLPPPS
Trigger: AGATGGTGGTGGCAATAGTCAGGAGAAGGTAACATT...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCCAACATATGCACGGGTaGGTTTCTAGGCCCTTATTT +
Preference number: 2 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIQHMHG*VSRPLF
Trigger: AAATAAGGGCCTAGAAACTCACCCGTGCATATGTTG...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATTCCCCCAAATCATGTTaGAATGGAATCCCCAGAATG +
Preference number: 2 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHSPKSC*NGIPRM
Trigger: CATTCTGGGGATTCCATTTCAACATGATTTGGGGGA...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp TTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCAGCAATTTCCCTGATATaGTCTGGTGTTGACCCACAG +
Preference number: 2 (lower is better)
Translates to: LSCKIWSLHLDHLACHHPAISLI*SGVDPQ
Trigger: CTGTGGGTCAACACCAGATCATATCAGGGAAATTGC...TGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTACTGCAGGAAGACCCTaGTCCTCTACAAGGTTCCAC +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFTAGRP*SSTRFH
Trigger: GTGGAACCTTGTAGAGGAGCAGGGTCTTCCTGCAGT...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFLFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGATGGGAGGACGAAAATaGCCAGAAAGCATGGCTGCT +
Preference number: 2 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGMGGRK*PESMAA
Trigger: AGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCCAT...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATCTTATTTTGTTCCCCTaGTCAGAATGCCTACCTCTG +
Preference number: 2 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHLILFP*SECLPL
Trigger: CAGAGGTAGGCATTCTGAGCAGGGGAACAAAATAAG...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp ACAGAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCAAAAAGACGACTAAGTaGCCTCCTAGATTCCACTGT +
Preference number: 2 (lower is better)
Translates to: TELQKFLMDIIIHREVSSKKTTK*PPRFHC
Trigger: ACAGTGGAATCTAGGAGGCCACTTAGTCGTCTTTTT...GCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCGGCTTGTTGCTTGAGTaGTGGCACCATTCTTCATTA +
Preference number: 2 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIGLLLE*WHHSSL
Trigger: TAATGAAGAATGGTGCCACCACTCAAGCAACAAGCC...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp ATGATGAGTTTAGCAAACTTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGAGTCACCAAAGGTGTTaGGAAGACCTGCATTGGGAT +
Preference number: 2 (lower is better)
Translates to: MMSLANFLDPATLQRSPMSHQRC*EDLHWD
Trigger: ATCCCAATGCAGGTCTTCCCAACACCTTTGGTGACT...CATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACTCATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463959.1
3UTR-3UTR TCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGTCCTGGCTAACACAGTaGAATCCTGTCTCTACTTTT +
Preference number: 2 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWSWLTQ*NPVSTF
Trigger: AAAAGTAGAGACAGGATTTCACTGTGTTAGCCAGGA...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGTTGCCACCACCATCTTaGAGTAGGATGAGTGTATAT +
Preference number: 2 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWLPPPS*SRMSVY
Trigger: ATATACACTCATCCTACTTCAAGATGGTGGTGGCAA...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAGCTGACTTTATAACCTaGGGTAGAAACATTTTTCCA +
Preference number: 2 (lower is better)
Translates to: REFCSHLVQPLENEVFRRADFIT*GRNIFP
Trigger: TGGAAAAATGTTTCTACCTCAGGTTATAAAGTCAGC...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR GCA 90 bp AATTATTTACTCCTTCCAGCAATCTGCCTCTTTCCATATAGAAGTTCTTTCTCTCTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: NYLLLPAICLFPYRSSFSLFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...AGAGAAAGAACTTCTATATGGAAAGAGGCAGATTGCTGGAAGGAGTAAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR GCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGACCACTTAGATTAAAATaGCCCATTTCTCACAGTATC +
Preference number: 2 (lower is better)
Translates to: REFCSHLVQPLENEVFRRPLRLK*PISHSI
Trigger: GATACTGTGAGAAATGGGGCATTTTAATCTAAGTGG...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTATGGGAGGACGAAAATaGCCAGAAAGCATGGCTGCT +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFMGGRK*PESMAA
Trigger: AGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCCAT...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCGTCACCAGGTCATTTTaGAAAGGTCAACATATGCAC +
Preference number: 2 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIVTRSF*KGQHMH
Trigger: GTGCATATGTTGACCTTTGCAAAATGACCTGGTGAC...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTGGCATCTACCTATGTaGTCCTGTCCCTTCCACTTC +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFWHLPM*SCPFHF
Trigger: GAAGTGGAAGGGACAGGAGCACATAGGTAGATGCCA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp CTCAACCTCAGCCACAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCAAAAGCAGTGGCAGGTaGAACTCTAGGCTTACAATT +
Preference number: 2 (lower is better)
Translates to: LNLSHRYVLPQCIILNLIKSSGR*NSRLTI
Trigger: AATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTT...GATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTGTGGCTGAGGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR TCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCAGGTTGACTTGCTTTaGAATCAAACGACCTCTGTC +
Preference number: 2 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGQVDLL*NQTTSV
Trigger: GACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR TCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATAAAAGTGTTATGGTCTaGTGTATCCCCCAAATCATG +
Preference number: 2 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHKSVMV*CIPQIM
Trigger: CATGATTTGGGGGATACATCAGACCATAACACTTTT...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCTCCACTCATCAGTCTaGATGACTTTCTTCCCTCCT +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFLHSSV*MTFFPP
Trigger: AGGAGGGAAGAAAGTCATTCAGACTGATGAGTGGAG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp ACAGAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCCCACTTAGATTAAAATaGCCCATTTCTCACAGTATC +
Preference number: 2 (lower is better)
Translates to: TELQKFLMDIIIHREVSSPLRLK*PISHSI
Trigger: GATACTGTGAGAAATGGGGCATTTTAATCTAAGTGG...GCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp AGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCTGTGTCTGTTTCTGTTaGCTGTCCTTCTTCATCAAA +
Preference number: 2 (lower is better)
Translates to: SSLWISSYTGRFPAFTIPCVCFC*LSFFIK
Trigger: TTTGATGAAGAAGGACAGGCAACAGAAACAGACACA...GGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGGAAAACCCCATGCATTaGTTCTCGAATGGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGENPMH*FSNGFH
Trigger: ATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTC...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTGTAAGAGCTTCTCAGTaGCCTCAGGGTCTTTATTCC +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFVRASQ*PQGLYS
Trigger: GGAATAAAGACCCTGAGGCCACTGAGAAGCTCTTAC...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CAA 90 bp GCAATACAGGAGATTAATATTCAGAAAGAGTTCTGTACCAGAACTTaGTACCAGTGTTTCCAACAGTGGTGTACAGCACACTGGTTCATC +
Preference number: 2 (lower is better)
Translates to: AIQEINIQKEFCTRT*YQCFQQWCTAHWFI
Trigger: GATGAACCAGTGTGCTGTACACCACTGTTGGAAACACTGGTACAAAGTTCTGGTACAGAACTCTTTCTGAATATTAATCTCCTGTATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR CCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTAAAAAGACGACTAAGTaGCCTCCTAGATTCCACTGT +
Preference number: 2 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAKKTTK*PPRFHC
Trigger: ACAGTGGAATCTAGGAGGCCACTTAGTCGTCTTTTT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR CCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATCAAATCATGTTGAAATaGAATCCCCAGAATGATGGT +
Preference number: 2 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHQIMLK*NPQNDG
Trigger: ACCATCATTCTGGGGATTCCATTTCAACATGATTTG...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp AGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCTTAAGTTGCAAAATCTaGTCATTGCACTTGGACCAT +
Preference number: 2 (lower is better)
Translates to: SSLWISSYTGRFPAFTIPLSCKI*SLHLDH
Trigger: ATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA...GGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CCA 90 bp TTCTCTGGAGAATCTGATTCTGGCATAGCAATACAGGAGATTAATATTCAGAAAGACGCGTCCAGGACATaGATTACAGGTGCACTGTAT +
Preference number: 2 (lower is better)
Translates to: FSGESDSGIAIQEINIQKDASRT*ITGALY
Trigger: ATACAGTGCACCTGTAATCCATGTCCTGGACGCGTC...TTTCTGAATATTAATCTCCTGTATTGCTATGCCAGAATCAGATTCTCCAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGTTGACTTGCTTTaGAATCAAACGACCTCTGTC +
Preference number: 2 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFQVDLL*NQTTSV
Trigger: GACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAGAGTTTGAGGCTTGTTaGTTGAGTGGTGGCACCATT +
Preference number: 2 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSEFEAC*LSGGTI
Trigger: AATGGTGCCACCACTCAAGCAACAAGCCTCAAACTC...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTAAAAAGACGACTAAGTaGCCTCCTAGATTCCACTGT +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFKKTTK*PPRFHC
Trigger: ACAGTGGAATCTAGGAGGCCACTTAGTCGTCTTTTT...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTAAAAAGACGACTAAGTaGCCTCCTAGATTCCACTGT +
Preference number: 2 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSKKTTK*PPRFHC
Trigger: ACAGTGGAATCTAGGAGGCCACTTAGTCGTCTTTTT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR CCA 90 bp AATTATTTACTCCTTCCAGCAATCTGCCTCTTTCCATATAGAAGTTCTTTCTCTACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCT +
Preference number: 2 (lower is better)
Translates to: NYLLLPAICLFPYRSSFSTMHFP*QHFNPA
Trigger: AGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGT...AGAGAAAGAACTTCTATATGGAAAGAGGCAGATTGCTGGAAGGAGTAAATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR TCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAAATGTTACCTTCTCCTaGCTATTGCCACCACCATCT +
Preference number: 2 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSNVTFS*LLPPPS
Trigger: AGATGGTGGTGGCAATAGTCAGGAGAAGGTAACATT...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR GCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTAAAAGCAGGTTGACTTaGTTTGAAATCAAACGACCT +
Preference number: 2 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAKSRLT*FEIKRP
Trigger: AGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCCACTTAGATTAAAATaGCCCATTTCTCACAGTATC +
Preference number: 2 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGPLRLK*PISHSI
Trigger: GATACTGTGAGAAATGGGGCATTTTAATCTAAGTGG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACTTATTTTGTTCCCCTaGTCAGAATGCCTACCTCTG +
Preference number: 2 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSLILFP*SECLPL
Trigger: CAGAGGTAGGCATTCTGAGCAGGGGAACAAAATAAG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCACTTCCTCCTTCTGTaGGTAATTACTATGCTCAAT +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFHFLLL*VITMLN
Trigger: ATTGAGCATAGTAATTACCCACAGAAGGAGGAAGTG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp TTTGTTGCATGGATAAAATTAATGGCATACAAGTTGTGTTCCTCCATTCCAGTCCAATCACAGCAAAATTaGAGGAGTCGATGCACAAAG +
Preference number: 2 (lower is better)
Translates to: FVAWIKLMAYKLCSSIPVQSQQN*RSRCTK
Trigger: CTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTG...GACTGGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR TCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCATCCTGGCTAACACAGTaGAATCCTGTCTCTACTTTT +
Preference number: 2 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSSWLTQ*NPVSTF
Trigger: AAAAGTAGAGACAGGATTTCACTGTGTTAGCCAGGA...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAATGGTAAGAAATGAGTaGCTTTATGCTGCCCACTTG +
Preference number: 2 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSMVRNE*LYAAHL
Trigger: CAAGTGGGCAGCATAAAGTCACTCATTTCTTACCAT...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR TCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCATCTTGAAGTAGGATaGGTGTATATTTTGCATGCA +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFHLEVG*VYILHA
Trigger: TGCATGCAAAATATACACTCATCCTACTTCAAGATG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR TCA 90 bp TTCTCTGGAGAATCTGATTCTGGCATAGCAATACAGGAGATTAATATTCAGAAACCACTTTTTCTGGCTTaGCTTAAGGGTAAGTATCTC +
Preference number: 2 (lower is better)
Translates to: FSGESDSGIAIQEINIQKPLFLA*LKGKYL
Trigger: GAGATACTTACCCTTAAGTCAAGCCAGAAAAAGTGG...TTTCTGAATATTAATCTCCTGTATTGCTATGCCAGAATCAGATTCTCCAGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTAAAAGCAGGTTGACTTaGTTTGAAATCAAACGACCT +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFKSRLT*FEIKRP
Trigger: AGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCCACTTAGATTAAAATaGCCCATTTCTCACAGTATC +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFPLRLK*PISHSI
Trigger: GATACTGTGAGAAATGGGGCATTTTAATCTAAGTGG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTTAAGTTGCAAAATCTaGTCATTGCACTTGGACCAT +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFLSCKI*SLHLDH
Trigger: ATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CAA 90 bp TCTTTAATGACTTTTGTTGCATGGATAAAATTAATGGCATACAAGTaGTGTTCCTCCATTCCAGTCCCAATGGTTAGGATATTAGGGTCA +
Preference number: 2 (lower is better)
Translates to: SLMTFVAWIKLMAYK*CSSIPVPMVRILGS
Trigger: TGACCCTAATATCCTAACCATTGGGACTGGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAAAGTCATTAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR GCA 90 bp GACTTTTGTTGCATGGATAAAATTAATGGCATACAAGTTGTGTTCCTCCATTCCAAAAGCAGGTTGACTTaGTTTGAAATCAAACGACCT +
Preference number: 2 (lower is better)
Translates to: DFCCMDKINGIQVVFLHSKSRLT*FEIKRP
Trigger: AGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT...GGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTAAGAAAAAGATGACATaGTTGAGTTTGAGGCTTGTT +
Preference number: 2 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFKKKMT*LSLRLV
Trigger: AACAAGCCTCAAACTCAACCATGTCATCTTTTTCTT...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCATTTTTAAAGCAGTGGTaGCTGTTTACACATCCACAA +
Preference number: 2 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSFLKQW*LFTHPQ
Trigger: TTGTGGATGTGTAAACAGGCACCACTGCTTTAAAAA...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCATGTCTTCTCAAGTTGTaGATCATCTTCTCACTTCAA +
Preference number: 2 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSCLLKL*IIFSLQ
Trigger: TTGAAGTGAGAAGATGATCCACAACTTGAGAAGACA...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp GGTCGGGCTGGCTGGGGTAGCCAGGAGCCGGGCGGATaGCCTTGTACCGCAGCCTGCGCAGGTCTGCGACGT +
Preference number: 3 (lower is better)
Translates to: GRAGWGSQEPGG*PCTAACAGLRR
Trigger: ACGTCGCAGACCTGCGCAGGCTGCGGTACAAGGGCATCCGCCCGGCTCCTGGCTACCCCAGCCAGCCCGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR GCA 72 bp AGCCAGGAGCCGGGCGGATGCCCTTGTACCGCAGCCTaGGCAGGTCTGCGACGTCCAGCTGCTCACTGCCAC +
Preference number: 3 (lower is better)
Translates to: SQEPGGCPCTAA*AGLRRPAAHCH
Trigger: GTGGCAGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTGCGGTACAAGGGCATCCGCCCGGCTCCTGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR GCA 72 bp CGGGCGGATGCCCTTGTACCGCAGCCTGCGCAGGTCTaGGACGTCCAGCTGCTCACTGCCACAGTAGGCCCA +
Preference number: 3 (lower is better)
Translates to: RADALVPQPAQV*DVQLLTATVGP
Trigger: TGGGCCTACTGTGGCAGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTGCGGTACAAGGGCATCCGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR GCA 72 bp TCCCTCCTGGCTTCCTCCAACCCACAGCTGCTCCCCTaGTGGCTCCCCCTCCTCCTCCTCCAGATTCTCTTC +
Preference number: 3 (lower is better)
Translates to: SLLASSNPQLLP*WLPLLLLQILF
Trigger: GAAGAGAATCTGGAGGAGGAGGAGGGGGAGCCAGCAGGGGAGCAGCTGTGGGTTGGAGGAAGCCAGGAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 72 bp CTCCTGGCTTCCTCCAACCCACAGCTGCTCCCCTGCTaGCTCCCCCTCCTCCTCCTCCAGATTCTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: LLASSNPQLLPC*LPLLLLQILFS
Trigger: GGAGAAGAGAATCTGGAGGAGGAGGAGGGGGAGCCAGCAGGGGAGCAGCTGTGGGTTGGAGGAAGCCAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp GCAGCCTGCGCAGGTCTGCGACGTCCAGCTGCTCACTaGCACAGTAGGCCCACAGTTCTCGGCGAACTCTTT +
Preference number: 3 (lower is better)
Translates to: AACAGLRRPAAH*HSRPTVLGELF
Trigger: AAAGAGTTCGCCGAGAACTGTGGGCCTACTGTGGCAGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR GCA 72 bp CTCTGCGTACAGGTGAATGTCGTCTTGGATACTCTGTaGTGGCCAGAACCCAACCACACCCCGGGCCCGGAG +
Preference number: 3 (lower is better)
Translates to: LCVQVNVVLDTL*WPEPNHTPGPE
Trigger: CTCCGGGCCCGGGGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGACGACATTCACCTGTACGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CCA 72 bp CCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTaGCAGCAGCAAGGATGCACCACTCTCCTGCCCCTC +
Preference number: 3 (lower is better)
Translates to: PLIPQSLVSGHC*QQQGCTTLLPL
Trigger: GAGGGGCAGGAGAGTGGTGCATCCTTGCTGCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp CATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTaGTGGCAGCAGCAAGGATGCACCACTCTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: HPLIPQSLVSGH*WQQQGCTTLLP
Trigger: GGGCAGGAGAGTGGTGCATCCTTGCTGCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp GGCTATGGGCTCTGCAGCCTGGGGCACAGCAGCCTCTaGGTACAGGTGAATGTCGTCTTGGATACTCTGTGC +
Preference number: 3 (lower is better)
Translates to: GYGLCSLGHSSL*VQVNVVLDTLC
Trigger: GCACAGAGTATCCAAGACGACATTCACCTGTACGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR TCA 72 bp AGAGAGCAAGCTTACCCTCCACCCACTGTGAGAACATaGGAAGCTGGCCGCTGCATCCCAGAAGAGGGCCCT +
Preference number: 3 (lower is better)
Translates to: REQAYPPPTVRT*EAGRCIPEEGP
Trigger: AGGGCCCTCTTCTGGGATGCAGCGGCCAGCTTCTCATGTTCTCACAGTGGGTGGAGGGTAAGCTTGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 72 bp TGCGTACAGGTGAATGTCGTCTTGGATACTCTGTGCTaGCCAGAACCCAACCACACCCCGGGCCCGGAGTTT +
Preference number: 3 (lower is better)
Translates to: CVQVNVVLDTLC*PEPNHTPGPEF
Trigger: AAACTCCGGGCCCGGGGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGACGACATTCACCTGTACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CCA 72 bp AGTCCTTCTCAGCCTGTTGCCTTAACCCATAGAAGGTaGCTATGGGCTCTGCAGCCTGGGGCACAGCAGCCT +
Preference number: 3 (lower is better)
Translates to: SPSQPVALTHRR*LWALQPGAQQP
Trigger: AGGCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATGGGTTAAGGCAACAGGCTGAGAAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACCCTCGATTCGGGTACTaGCCCCGGAGCTGCCAGACA +
Preference number: 3 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYPRFGY*PRSCQT
Trigger: TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGG...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR TCA 72 bp GTCACGGATGCCAGAATGCAAGGGAGCGATGAAGTCTaGGAGGCAGTAGTATGGCTCCGTGCTGGCAGAGTC +
Preference number: 3 (lower is better)
Translates to: VTDARMQGSDEV*EAVVWLRAGRV
Trigger: GACTCTGCCAGCACGGAGCCATACTACTGCCTCTCAGACTTCATCGCTCCCTTGCATTCTGGCATCCGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR GCA 72 bp AGAAGGGCCCTCAGCAATCCCATTCCCAGGCCTCTTTaGAGCATTGGGTTCTGCTGGCATGCTTCGAAACGC +
Preference number: 3 (lower is better)
Translates to: RRALSNPIPRPL*SIGFCWHASKR
Trigger: GCGTTTCGAAGCATGCCAGCAGAACCCAATGCTGCAAAGAGGCCTGGGAATGGGATTGCTGAGGGCCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 72 bp GCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTaGTATCTGGGCACTGCTGGCAGCAGCAAGGATGCA +
Preference number: 3 (lower is better)
Translates to: ANGPAIHSFPKA*YLGTAGSSKDA
Trigger: TGCATCCTTGCTGCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR TCA 72 bp GTCACGGGGAGATGGTTATTCAGGCAGCAGGAGGATTaGGGCGGGGGTGTAAAGAATCAGAGAGCCCACTCT +
Preference number: 3 (lower is better)
Translates to: VTGRWLFRQQED*GGGVKNQRAHS
Trigger: AGAGTGGGCTCTCTGATTCTTTACACCCCCGCCTCAATCCTCCTGCTGCCTGAATAACCATCTCCCCGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp CCTCCCATTGTCTTCAACCTAGCAAAGCCAGCTGTGTaGCAACAGTCCCCACAATCCCCTGACGCTGCTCTT +
Preference number: 3 (lower is better)
Translates to: PPIVFNLAKPAV*QQSPQSPDAAL
Trigger: AAGAGCAGCGTCAGGGGATTGTGGGGACTGTTGGCACACAGCTGGCTTTGCTAGGTTGAAGACAATGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 72 bp AAGAATCAGAGAGCCCACTCTTCCAGCTCTAGGAGGTaGGAACCAACCCGGCAGCCTGTGTTGCAGATGAAT +
Preference number: 3 (lower is better)
Translates to: KNQRAHSSSSRR*EPTRQPVLQMN
Trigger: ATTCATCTGCAACACAGGCTGCCGGGTTGGTTCCCACCTCCTAGAGCTGGAAGAGTGGGCTCTCTGATTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp TCCCAGGCCTCTTTGCAGCATTGGGTTCTGCTGGCATaGTTCGAAACGCTCTTCATTGCTTTCTCGGCATTG +
Preference number: 3 (lower is better)
Translates to: SQASLQHWVLLA*FETLFIAFSAL
Trigger: CAATGCCGAGAAAGCAATGAAGAGCGTTTCGAAGCATGCCAGCAGAACCCAATGCTGCAAAGAGGCCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp CCAAGGACTACTCCAACTATGTTCTTGCCTATGTCGTaGACGTCGCCTTTAACAGTGGCCAGCACGATGGTG +
Preference number: 3 (lower is better)
Translates to: PRTTPTMFLPMS*TSPLTVASTMV
Trigger: CACCATCGTGCTGGCCACTGTTAAAGGCGACGTGCACGACATAGGCAAGAACATAGTTGGAGTAGTCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp CACCACACTCTTGGACGCGTCCAGGACATGGATTACAGGTGCACTGTATCTCGGATTTCCACCTGCACTTaGGCAACACACAAGGCTTCT +
Preference number: 3 (lower is better)
Translates to: HHTLGRVQDMDYRCTVSRISTCT*ATHKAS
Trigger: AGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAAT...CCGAGATACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR CAA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAGTGAGCGCATGCCTTTaGCCAAAGGGAGTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: REFCSHLVQPLENEVFRRVSACL*PKGVLQ
Trigger: CTGCAGAACTCCCTTTGGCAAAAGGCATGCGCTCAC...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR CAA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCAAGCCCTATTTCCTCTaGTGTAGTCTTCACTATTTT +
Preference number: 3 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSKPYFL*CSLHYF
Trigger: AAAATAGTGAAGACTACACAAGAGGAAATAGGGCTT...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp AATCCCTCTCCTGTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATCGTCTCCTTTGGCCTGCTCTaGGTATGCTTCAACAAGCTC +
Preference number: 3 (lower is better)
Translates to: NPSPVCPERVRPLLSTIVSFGLL*VCFNKL
Trigger: GAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA...GACGATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGACAGGAGAGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
3UTR-3UTR CAA 90 bp GTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGTTCAGAACTCCAACTATGTTCTaGCCTATGTCGTGCACGTCG +
Preference number: 3 (lower is better)
Translates to: VFKDLGPNKRGLHWVRFRTPTMF*PMSCTS
Trigger: CGACGTGCACGACATAGGCAAGAACATAGTTGGAGT...TCTGAACCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR TCA 72 bp TGGGATTACTTAGGGAGTGGTCCTTCCTGTCCCCACTaGCTTGCCATGTCACCAGGTCATTTTGCAAAGGTC +
Preference number: 3 (lower is better)
Translates to: WDYLGSGPSCPH*LAMSPGHFAKV
Trigger: GACCTTTGCAAAATGACCTGGTGACATGGCAAGTCAGTGGGGACAGGAAGGACCACTCCCTAAGTAATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR TCA 72 bp TTGCACTTGGACCATCTAGCATGCCATCATCCATGTTaGCATCCAACACCTGGGCTCCCATTTCCACCTGCA +
Preference number: 3 (lower is better)
Translates to: LHLDHLACHHPC*HPTPGLPFPPA
Trigger: TGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAACATGGATGATGGCATGCTAGATGGTCCAAGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR TCA 72 bp CAGAACCCAACCACACCCCGGGCCCGGAGTTTCTTTTaGCTAATCAGTGTGTTCAGCATATTGTGGGCATCA +
Preference number: 3 (lower is better)
Translates to: QNPTTPRARSFF*LISVFSILWAS
Trigger: TGATGCCCACAATATGCTGAACACACTGATTAGTCAAAAGAAACTCCGGGCCCGGGGTGTGGTTGGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CCA 72 bp GTCAGGGGCAACTCCCAGGTTGATGGTGTTACTGACTaGCAGAAGAAATTCAGTCTCCCTGGAAGTTGGGTT +
Preference number: 3 (lower is better)
Translates to: VRGNSQVDGVTD*QKKFSLPGSWV
Trigger: AACCCAACTTCCAGGGAGACTGAATTTCTTCTGCCAGTCAGTAACACCATCAACCTGGGAGTTGCCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 72 bp CATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTaGCAACACACAAGGCTTCTTCATAGTTTCCTGCCA +
Preference number: 3 (lower is better)
Translates to: HPTPGLPFPPAL*QHTRLLHSFLP
Trigger: TGGCAGGAAACTATGAAGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR CCA 72 bp TCTAGCATGCCATCATCCATGTTGACATCCAACACCTaGGCTCCCATTTCCACCTGCACTTTGGCAACACAC +
Preference number: 3 (lower is better)
Translates to: SSMPSSMLTSNT*APISTCTLATH
Trigger: GTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAACATGGATGATGGCATGCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR CCA 72 bp TTTCATCTAACAGCTGGGAACACACCACCACACTCTTaGACGCGTCCAGGACATGGATTACAGGTGCACTGT +
Preference number: 3 (lower is better)
Translates to: FHLTAGNTPPHS*TRPGHGLQVHC
Trigger: ACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGTGTTCCCAGCTGTTAGATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp CACTGCCACAGTAGGCCCACAGTTCTCGGCGAACTCTTTCATGGAGCTCTTCTGTTAAGGCACCCTAGGTaGTATTTCCTTGAGGATCAT +
Preference number: 3 (lower is better)
Translates to: HCHSRPTVLGELFHGALLLRHPR*YFLEDH
Trigger: ATGATCCTCAAGGAAATACAACCTAGGGTGCCTTAA...CAGAAGAGCTCCATGAAAGAGTTCGCCGAGAACTGTGGGCCTACTGTGGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTCTCACAGTATCATTTaGTCACAGGGTCACACTTCT +
Preference number: 3 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMSHSII*SQGHTS
Trigger: AGAAGTGTGACCCTGTGACAAAATGATACTGTGAGA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR CAA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAAGAAAGCATGGCTGCTaGACCACACTGGGGCAAATG +
Preference number: 3 (lower is better)
Translates to: REFCSHLVQPLENEVFRRRKHGC*TTLGQM
Trigger: CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCT...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTGTCACCAGGTCATTTaGCAAAGGTCAACATATGCA +
Preference number: 3 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMCHQVI*QRSTYA
Trigger: TGCATATGTTGACCTTTGCAAAATGACCTGGTGACA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp GGCTTCAGTGTTTCTGACAAGCAAGCAGTGAGCGCATaGCTTTTGCCAAAGGGAGTTCTGCAGCCATTTAGT +
Preference number: 3 (lower is better)
Translates to: GFSVSDKQAVSA*LLPKGVLQPFS
Trigger: ACTAAATGGCTGCAGAACTCCCTTTGGCAAAAGGCATGCGCTCACTGCTTGCTTGTCAGAAACACTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR GCA 72 bp AACCAGAACAGCTGCATAACTTGGCATCTACCTATGTaGTCCTGTCCCTTCCACTTCCTCCTTCTGTGGGTA +
Preference number: 3 (lower is better)
Translates to: NQNSCITWHLPM*SCPFHFLLLWV
Trigger: TACCCACAGAAGGAGGAAGTGGAAGGGACAGGAGCACATAGGTAGATGCCAAGTTATGCAGCTGTTCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp AACACTTGTAAGCCTACCAGGAGGAACCAGAACAGCTaGATAACTTGGCATCTACCTATGTGCTCCTGTCCC +
Preference number: 3 (lower is better)
Translates to: NTCKPTRRNQNS*ITWHLPMCSCP
Trigger: GGGACAGGAGCACATAGGTAGATGCCAAGTTATGCAGCTGTTCTGGTTCCTCCTGGTAGGCTTACAAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp CCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATaGTTCAACAAGCTCATCAAATGCGTACTTCACCTT +
Preference number: 3 (lower is better)
Translates to: PAIQKSFGLLLV*FNKLIKCVLHL
Trigger: AAGGTGAAGTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652435.1
3UTR GCA 72 bp CACACTCTTGGACGCGTCCAGGACATGGATTACAGGTaGACTGTATCTCGGAGCTATTTTAACTGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: HTLGRVQDMDYR*TVSRSYFNCCV
Trigger: CACACAGCAGTTAAAATAGCTCCGAGATACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CCA 72 bp TCAACCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTaGTATGCTTCAACAAGCTCATCAAATGCGTACTTC +
Preference number: 3 (lower is better)
Translates to: STPPSRSPLACS*YASTSSSNAYF
Trigger: GAAGTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
3UTR CCA 72 bp GAACACACCACCACACTCTTGGACGCGTCCAGGACATaGATTACAGGTGCACTGTATCTCGGAGCTATTTTA +
Preference number: 3 (lower is better)
Translates to: EHTTTLLDASRT*ITGALYLGAIL
Trigger: TAAAATAGCTCCGAGATACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCGTGAGCGCATGCCTTTaGCCAAAGGGAGTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIVSACL*PKGVLQ
Trigger: CTGCAGAACTCCCTTTGGCAAAAGGCATGCGCTCAC...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCCTTTATGCTGCCCACTaGTCCAACTCCGCACGGGAT +
Preference number: 3 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPILYAAH*SNSARD
Trigger: ATCCCGTGCGGAGTTGGACAAGTGGGCAGCATAAAG...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAAAAGATGGTTCTTCATTaGTTCCTCCCTTGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQKMVLH*FLPCFF
Trigger: GAAGAAGCAAGGGAGGAACAAATGAAGAACCATCTT...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGCACCATGACACTGTCTaGACAATAAAACTTGGTATC +
Preference number: 3 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMHHDTV*TIKLGI
Trigger: GATACCAAGTTTTATTGTCAAGACAGTGTCATGGTG...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACCCAATGTTAACAAAGTaGGTGTACGGTCCAATCCTG +
Preference number: 3 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYPMLTK*VYGPIL
Trigger: CAGGATTGGACCGTACACCAACTTTGTTAACATTGG...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR CAA 90 bp GTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGTTCAGATGCAAAATCTGGTCATaGCACTTGGACCATCTAGCA +
Preference number: 3 (lower is better)
Translates to: VFKDLGPNKRGLHWVRFRCKIWS*HLDHLA
Trigger: TGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCA...TCTGAACCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp ACAAATCCCTCTCCTGTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATCGCAAACAAGGCTGCCTaGGCATTGGCAGTATCAAAA +
Preference number: 3 (lower is better)
Translates to: TNPSPVCPERVRPLLSTIANKAA*ALAVSK
Trigger: TTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTGC...GATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGACAGGAGAGGGATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
3UTR GCA 72 bp TTACTTAGGGAGTGGTCCTTCCTGTCCCCACTGACTTaGCATGTCACCAGGTCATTTTGCAAAGGTCAACAT +
Preference number: 3 (lower is better)
Translates to: LLREWSFLSPLT*HVTRSFCKGQH
Trigger: ATGTTGACCTTTGCAAAATGACCTGGTGACATGGCAAGTCAGTGGGGACAGGAAGGACCACTCCCTAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp AACAAGATTGTGAGAGTTCAGAGTTCCTTCCTCACCTaGTGCAAGTTCACACTCAGCAGGTCGCCAGATGTA +
Preference number: 3 (lower is better)
Translates to: NKIVRVQSSFLT*CKFTLSRSPDV
Trigger: TACATCTGGCGACCTGCTGAGTGTGAACTTGCAGCAGGTGAGGAAGGAACTCTGAACTCTCACAATCTTGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp AAGATATCAACCCCGCCATCCAGAAGTCCTTTGGCCTaGTCTTGGTATGCTTCAACAAGCTCATCAAATGCG +
Preference number: 3 (lower is better)
Translates to: KISTPPSRSPLA*SWYASTSSSNA
Trigger: CGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGATATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
3UTR CCA 72 bp CATGGTAAAGGAAAACCCCATGCATTGCTTCTCGAATaGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGG +
Preference number: 3 (lower is better)
Translates to: HGKGKPHALLLE*LPFLGRRRTSW
Trigger: CCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCCTTTACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp ACTATGTTCTTGCCTATGTCGTGCACGTCGCCTTTAACAGTGGCCAGCACGATGTTAAGGCACCCTAGGTaGTATTTCCTTGAGGATCAT +
Preference number: 3 (lower is better)
Translates to: TMFLPMSCTSPLTVASTMLRHPR*YFLEDH
Trigger: ATGATCCTCAAGGAAATACAACCTAGGGTGCCTTAA...CATCGTGCTGGCCACTGTTAAAGGCGACGTGCACGACATAGGCAAGAACATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTTGCAACCCTCTGTACTaGTGCTTTACCCTCAGCATA +
Preference number: 3 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFCNPLY*CFTLSI
Trigger: TATGCTGAGGGTAAAGCACAAGTACAGAGGGTTGCA...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp CCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGCCAATGTTAACAAAGTaGGTGTACGGTCCAATCCTG +
Preference number: 3 (lower is better)
Translates to: PCIASRMASIPRKEKDKLPMLTK*VYGPIL
Trigger: CAGGATTGGACCGTACACCAACTTTGTTAACATTGG...CAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR-3UTR CAA 90 bp GACCATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCGGTCCTTCAATTATATaGAGAGGTCGGGGATATTTT +
Preference number: 3 (lower is better)
Translates to: DHDAAVVVTIILIGLAQLGPSII*RGRGYF
Trigger: AAAATATCCCCGACCTCTCAATATAATTGAAGGACC...GAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp GGAAATCTTCCCCACAGCAAAATATTTGGACTTCAAATTGGAGAAGTAGAGGCCTGCACAAAGGTACCTTaGCGATGTCTGGCTCGGAAG +
Preference number: 3 (lower is better)
Translates to: GNLPHSKIFGLQIGEVEACTKVP*RCLARK
Trigger: CTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCA...GGCCTCTACTTCTCCAATTTGAAGTCCAAATATTTTGCTGTGGGGAAGATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR TCA 72 bp CACAGCTTCAGCAATTTCCCTGATATGATCTGGTGTTaGCCCACAGCATCCTCCAACTATATTGACCAAGCC +
Preference number: 3 (lower is better)
Translates to: HSFSNFPDMIWC*PTASSNYIDQA
Trigger: GGCTTGGTCAATATAGTTGGAGGATGCTGTGGGTCAACACCAGATCATATCAGGGAAATTGCTGAAGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463959.1
3UTR GCA 72 bp AAGATTGTGAGAGTTCAGAGTTCCTTCCTCACCTGCTaGAAGTTCACACTCAGCAGGTCGCCAGATGTATTA +
Preference number: 3 (lower is better)
Translates to: KIVRVQSSFLTC*KFTLSRSPDVL
Trigger: TAATACATCTGGCGACCTGCTGAGTGTGAACTTGCAGCAGGTGAGGAAGGAACTCTGAACTCTCACAATCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCTCTCACAGTATCATTTaGTCACAGGGTCACACTTCT +
Preference number: 3 (lower is better)
Translates to: SSEENRATPSPSESTVITSHSII*SQGHTS
Trigger: AGAAGTGTGACCCTGTGACAAAATGATACTGTGAGA...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR CAA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCTTTATGCTGCCCACTaGTCCAACTCCGCACGGGAT +
Preference number: 3 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFLYAAH*SNSARD
Trigger: ATCCCGTGCGGAGTTGGACAAGTGGGCAGCATAAAG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR-3UTR CAA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCTCGAAACGCTCTTCATaGCTTTCTCGGCATTGCACT +
Preference number: 3 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPISKRSS*LSRHCT
Trigger: AGTGCAATGCCGAGAAAGCAATGAAGAGCGTTTCGA...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp CAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCCTTGGAAATCTTCCCAGGTGAATGTCGTCTaGGATACTCTGTGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: QICSSSMHNPQPDPWKSSQVNVV*DTLCWP
Trigger: TGGCCAGCACAGAGTATCCAAGACGACATTCACCTG...GGAAGATTTCCAAGGATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR TCA 72 bp ACGGTAAAGAAAGTATCACTTGGGCCGCATCTAATATaGAATACTGAAGGTGGGTGTAGAGAGGGTGCTAGG +
Preference number: 3 (lower is better)
Translates to: TVKKVSLGPHLI*NTEGGCREGAR
Trigger: CCTAGCACCCTCTCTACACCCACCTTCAGTATTTCATATTAGATGCGGCCCAAGTGATACTTTCTTTACCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp TATGAACATTCTTACACATTCCTCCTAGTGGCCACATaGAAGAGTTTGCTGGACATACAGGTGGGAGTTGGA +
Preference number: 3 (lower is better)
Translates to: YEHSYTFLLVAT*KSLLDIQVGVG
Trigger: TCCAACTCCCACCTGTATGTCCAGCAAACTCTTGCATGTGGCCACTAGGAGGAATGTGTAAGAATGTTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp GTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTaGAAAATCTGGTCATTGCACTTGGACCATCTAGCA +
Preference number: 3 (lower is better)
Translates to: VPLRCLARKQLS*KIWSLHLDHLA
Trigger: TGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR CCA 72 bp CGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTaGTCATTGCACTTGGACCATCTAGCATGCCATCAT +
Preference number: 3 (lower is better)
Translates to: RCLARKQLSCKI*SLHLDHLACHH
Trigger: ATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR CCA 72 bp TTCTGTACCAGAACTTTGTACCAGTGTTTCCAACAGTaGTGTACAGCACACTGGTTCATCAGGCTAAGCAAG +
Preference number: 3 (lower is better)
Translates to: FCTRTLYQCFQQ*CTAHWFIRLSK
Trigger: CTTGCTTAGCCTGATGAACCAGTGTGCTGTACACCACTGTTGGAAACACTGGTACAAAGTTCTGGTACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR CAA 90 bp ACAGAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCTCTCACAGTATCATTTaGTCACAGGGTCACACTTCT +
Preference number: 3 (lower is better)
Translates to: TELQKFLMDIIIHREVSSSHSII*SQGHTS
Trigger: AGAAGTGTGACCCTGTGACAAAATGATACTGTGAGA...GCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTCACCATGACACTGTCTaGACAATAAAACTTGGTATC +
Preference number: 3 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFHHDTV*TIKLGI
Trigger: GATACCAAGTTTTATTGTCAAGACAGTGTCATGGTG...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp GAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTTGCAAAATCTGGTCATaGCACTTGGACCATCTAGCA +
Preference number: 3 (lower is better)
Translates to: ELQKFLMDIIIHREVSSICKIWS*HLDHLA
Trigger: TGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCA...AATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR TCA 72 bp TTGAGAATTGAGGGGAATAAAATGGTAAGAAATGAGTaGCTTTATGCTGCCCACTTGTCCAACTCCGCACGG +
Preference number: 3 (lower is better)
Translates to: LRIEGNKMVRNE*LYAAHLSNSAR
Trigger: CCGTGCGGAGTTGGACAAGTGGGCAGCATAAAGTCACTCATTTCTTACCATTTTATTCCCCTCAATTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR TCA 72 bp AACAGAGAACTAGATGAAGTTTCAGCAAGGGCTGTATaGAATGTGCATGGCGGTGTTACAGAGGCAAGAAGA +
Preference number: 3 (lower is better)
Translates to: NRELDEVSARAV*NVHGGVTEARR
Trigger: TCTTCTTGCCTCTGTAACACCGCCATGCACATTTCATACAGCCCTTGCTGAAACTTCATCTAGTTCTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCAAGATGGTTCTTCATTaGTTCCTCCCTTGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIKMVLH*FLPCFF
Trigger: GAAGAAGCAAGGGAGGAACAAATGAAGAACCATCTT...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp TCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGGTAAAGGAATCGGAAGCAATTAAGTaGCAAAATCTGGTCATTGCA +
Preference number: 3 (lower is better)
Translates to: SSIHYPHVHARLDCMVKESEAIK*QNLVIA
Trigger: TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGA...TTCCTTTACCATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp TTTGTTGCATGGATAAAATTAATGGCATACAAGTTGTGTTCCTCCATTCCAGTCTGCACAAAGGTACCTTaGCGATGTCTGGCTCGGAAG +
Preference number: 3 (lower is better)
Translates to: FVAWIKLMAYKLCSSIPVCTKVP*RCLARK
Trigger: CTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCA...GACTGGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR TCA 72 bp AAAAATCATTTCATCCAGGGAAGGAGTGATGAGTCCTaGCAGGCCAATTATATCTGCTTTGTGGTCAAGAGC +
Preference number: 3 (lower is better)
Translates to: KNHFIQGRSDES*QANYICFVVKS
Trigger: GCTCTTGACCACAAAGCAGATATAATTGGCCTGTCAGGACTCATCACTCCTTCCCTGGATGAAATGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR GCA 72 bp CACTGTCTTGACAATAAAACTTGGTATCACATAGGGTaGGTGTCCCCAACCTCTCCTTCATATTTAGAAGCA +
Preference number: 3 (lower is better)
Translates to: HCLDNKTWYHIG*VSPTSPSYLEA
Trigger: TGCTTCTAAATATGAAGGAGAGGTTGGGGACACGCACCCTATGTGATACCAAGTTTTATTGTCAAGACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR CCA 72 bp CCACAATGTTGTACAAGTCCCTACAGATCTAACAACTaGTACTGTCAGACCCAACCTTTGCAAATCTTATGG +
Preference number: 3 (lower is better)
Translates to: PQCCTSPYRSNN*YCQTQPLQILW
Trigger: CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGGACTTGTACAACATTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR CCA 72 bp AGCAGGTCGCCAGATGTATTACATTTACCTTATGGATaGCAGAGATTGTCTGTGATCAACAGCATTTGTGAC +
Preference number: 3 (lower is better)
Translates to: SRSPDVLHLPYG*QRLSVINSICD
Trigger: GTCACAAATGCTGTTGATCACAGACAATCTCTGCCATCCATAAGGTAAATGTAATACATCTGGCGACCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 72 bp ACTCAGCAGGTCGCCAGATGTATTACATTTACCTTATaGATGGCAGAGATTGTCTGTGATCAACAGCATTTG +
Preference number: 3 (lower is better)
Translates to: TQQVARCITFTL*MAEIVCDQQHL
Trigger: CAAATGCTGTTGATCACAGACAATCTCTGCCATCCATAAGGTAAATGTAATACATCTGGCGACCTGCTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CCA 72 bp TCCTTCAGACTAATGCTATTGACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCTTCAATCACAGCAAAA +
Preference number: 3 (lower is better)
Translates to: SFRLMLLTMHFP*QHFNPASITAK
Trigger: TTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCTGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR-3UTR CAA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTTAAGGCACCCTAGGTaGTATTTCCTTGAGGATCAT +
Preference number: 3 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQLRHPR*YFLEDH
Trigger: ATGATCCTCAAGGAAATACAACCTAGGGTGCCTTAA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR CAA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAAGAAAGCATGGCTGCTaGACCACACTGGGGCAAATG +
Preference number: 3 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSRKHGC*TTLGQM
Trigger: CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCT...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp TTTGTTGCATGGATAAAATTAATGGCATACAAGTTGTGTTCCTCCATTCCAGTCATGCCATCATCCATGTaGACATCCAACACCTGGGCT +
Preference number: 3 (lower is better)
Translates to: FVAWIKLMAYKLCSSIPVMPSSM*TSNTWA
Trigger: AGCCCAGGTGTTGGATGTCAACATGGATGATGGCAT...GACTGGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR-3UTR CAA 90 bp GGAAATCTTCCCCACAGCAAAATATTTGGACTTCAAATTGGAGAAGTAGAGGCCTCAATCACAGCAAAATaGGAGGAGTCGATGCACAAA +
Preference number: 3 (lower is better)
Translates to: GNLPHSKIFGLQIGEVEASITAK*EESMHK
Trigger: TTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGA...GGCCTCTACTTCTCCAATTTGAAGTCCAAATATTTTGCTGTGGGGAAGATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CCA 72 bp GGGAAATGTCCTTTTTCTCTTTGCCGAGTTTCTCTCTaGGAAATGAAGAAACAAGATTGTGAGAGTTCAGAG +
Preference number: 3 (lower is better)
Translates to: GKCPFSLCRVSL*EMKKQDCESSE
Trigger: CTCTGAACTCTCACAATCTTGTTTCTTCATTTCCCAGAGAGAAACTCGGCAAAGAGAAAAAGGACATTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTAAGGCACCCTAGGTaGTATTTCCTTGAGGATCAT +
Preference number: 3 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQALRHPR*YFLEDH
Trigger: ATGATCCTCAAGGAAATACAACCTAGGGTGCCTTAA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR CAA 90 bp CAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCCTTGGAAATCTTCCAAGATGGTTCTTCATTaGTTCCTCCCTTGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: QICSSSMHNPQPDPWKSSKMVLH*FLPCFF
Trigger: GAAGAAGCAAGGGAGGAACAAATGAAGAACCATCTT...GGAAGATTTCCAAGGATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTTAAGGCACCCTAGGTaGTATTTCCTTGAGGATCAT +
Preference number: 3 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFLRHPR*YFLEDH
Trigger: ATGATCCTCAAGGAAATACAACCTAGGGTGCCTTAA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
3UTR-3UTR CAA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCATCTCACAGTATCATTTaGTCACAGGGTCACACTTCT +
Preference number: 3 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSSHSII*SQGHTS
Trigger: AGAAGTGTGACCCTGTGACAAAATGATACTGTGAGA...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp AATCCAAGATACTTTCCTGGGCGAGAATTTAGGGATTaGTTGTTTCGTGAGTCTCCAAAAGTCTATAATAAT +
Preference number: 3 (lower is better)
Translates to: NPRYFPGREFRD*LFRESPKVYNN
Trigger: ATTATTATAGACTTTTGGAGACTCACGAAACAAGCAATCCCTAAATTCTCGCCCAGGAAAGTATCTTGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR GCA 72 bp ACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTaGAAATCTTATGGATATAAAATGGAATCTCATTGT +
Preference number: 3 (lower is better)
Translates to: TDLTTGTVRPNL*KSYGYKMESHC
Trigger: ACAATGAGATTCCATTTTATATCCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTCGTGCTCTCCACAGGTaGCGACGGCCAAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTRALHR*RRPRAT
Trigger: CGTGGCCCTTGGCCGTCGTCACCTGTGGAGAGCACG...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTTTCTGCAAAGGCCTCTaGCAGCCGGTCCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTFCKGL*QPVPQR
Trigger: GCGCTGGGGGACCGGCTGGCAGAGGCCTTTGCAGAA...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCCAGCCTGCGCAGGTCTaGGACGTCCAGCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSQPAQV*DVQLLT
Trigger: AGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTG...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTGCTGGGCGCGGCAACTaGTGGAGCACGTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTAGRGN*WSTCFL
Trigger: AAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCCAGC...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTACAGAGGGGCCAATGTaGGCAGGTACCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTTEGPM*AGTSFR
Trigger: CCTGAAGGAGGTACCTGCTCACATTGGCCCCTCTGT...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTCATGGCCTCTCTCGGGGCTaGGCGCGGCAACTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PRHPEVLWPALGMLQQAHGLSRG*ARQLLE
Trigger: CTCCAGCAGTTGCCGCGCCCAGCCCCGAGAGAGGCC...ATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTGCAGCCTCAAACTCCTaGCCTCAACCGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTAASNS*PQPILP
Trigger: TGGGAGGATCGGTTGAGGCCAGGAGTTTGAGGCTGC...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSVLERG*HVVESP
Trigger: AGGAGACTCGACAACATGTCACCCGCGCTCCAAGAC...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCCCCACTGTGAGAACATaGGAAGCTGGCCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSPTVRT*EAGRCI
Trigger: GATGCAGCGGCCAGCTTCTCATGTTCTCACAGTGGG...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTAGGCAGCAGGAGGATTaGGGCGGGGGTGTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTRQQED*GGGVKN
Trigger: ATTCTTTACACCCCCGCCTCAATCCTCCTGCTGCCT...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCACAGAGGGGCCAATGTaGGCAGGTACCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSTEGPM*AGTSFR
Trigger: CCTGAAGGAGGTACCTGCTCACATTGGCCCCTCTGT...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTAAGCGCCAGGCGAGCCTaGCACACAAGGCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVSARRA*HTRPGS
Trigger: AGACCCGGGCCTTGTGTGGCAGGCTCGCCTGGCGCT...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TCCATGTTGACATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTGGCAACATGTGGTCGGGCTGGCTaGGGTAGCCAGGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SMLTSNTWAPISTCTLATCGRAG*GSQEPG
Trigger: GCCCGGCTCCTGGCTACCCCAGCCAGCCCGACCACA...TGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAACATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCGTATCTGGGCACTGCTaGCAGCAGCAAGGATGCACC +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSVSGHC*QQQGCT
Trigger: GGTGCATCCTTGCTGCTGCCAGCAGTGCCCAGATAC...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TCAACCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCCAGAGGAGGACGACGTaGCATCCGGCTCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: STPPSRSPLACSWYASTSQRRTT*HPALSP
Trigger: GGGGCTCAGAGCCGGATGTCACGTCGTCCTCCTCTG...GCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR GCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCCTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSLFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CAAATCCCTCTCCTGTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATCGAGCGCCAGGCGAGCCTaGCACACAAGGCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: QIPLLSVRKESAHFYQRSSARRA*HTRPGS
Trigger: AGACCCGGGCCTTGTGTGGCAGGCTCGCCTGGCGCT...CGATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGACAGGAGAGGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTTCCTTCCTCACCTGCTaGAAGTTCACACTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTSFLTC*KFTLSR
Trigger: CCTGCTGAGTGTGAACTTGCAGCAGGTGAGGAAGGA...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTTTTAGCTTCTCCCGCTaGATCATGGTCCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTFSFSR*IMVPIP
Trigger: AGGGATGGGGACCATGATCCAGCGGGAGAAGCTAAA...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000650888.1
CDS-3UTR CCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTAGGCAGGGTCAGACATaGAAGGCTTTGCATGCCTCT +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTRQGQT*KALHAS
Trigger: AGAGGCATGCAAAGCCTTCCATGTCTGACCCTGCCT...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCTGGCTTCAGTGTTTCTaGCAAGCAAGCAGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSWLQCF*QASSER
Trigger: GCGCTCACTGCTTGCTTGTCAGAAACACTGAAGCCA...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCCATATGCTCCATAGATaGTCCCATCGCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSHMLHR*SHRTAA
Trigger: GGCTGCAGTGCGATGGGATCATCTATGGAGCATATG...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGAGGCTCTGGGTATCCTaGGCTCAGGAAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMRLWVS*AQEEAG
Trigger: CCCTGCCTCTTCCTGAGCTCAGGATACCCAGAGCCT...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTCTCCAACTATGTTCTTaGCTATGTCGTGCACGTCGC +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTLQLCS*LCRARR
Trigger: GCGACGTGCACGACATAGGCAAGAACATAGTTGGAG...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCAGTAGTATGGCTCCGTaGTGGCAGAGTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSSSMAP*WQSPSQ
Trigger: CTGAGAAGGACTCTGCCAGCACGGAGCCATACTACT...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTTGGCATCTACCTATGTaGTCCTGTCCCTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTWHLPM*SCPFHF
Trigger: GAAGTGGAAGGGACAGGAGCACATAGGTAGATGCCA...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCTTGCTTTCTCGGCATTaGACTCTCCCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSLLSRH*TLPPGF
Trigger: GAAGCCAGGAGGGAGAGTGCAATGCCGAGAAAGCAA...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCATTCCCAGGCCTCTTTaGAGCATTGGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSIPRPL*SIGFCW
Trigger: CCAGCAGAACCCAATGCTGCAAAGAGGCCTGGGAAT...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CACCACACTCTTGGACGCGTCCAGGACATGGATTACAGGTGCACTGTATCTCGGCAGTGGCCAGCACGATaGTGCCCTGGTAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: HHTLGRVQDMDYRCTVSRQWPAR*CPGKGP
Trigger: AGGACCCTTACCAGGGCACCATCGTGCTGGCCACTG...CCGAGATACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TCAACCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCGGGCGCGGCAACTGCTaGAGCACGTGCTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: STPPSRSPLACSWYASTSGRGNC*STCFLP
Trigger: GGGAAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCC...GCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCTTGACATCCAACACCTaGGCTCCCATTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSLTSNT*APISTC
Trigger: GCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAA...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTAGCATTGGGTTCTGCTaGCATGCTTCGAAACGCTCT +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTSIGFC*HASKRS
Trigger: AGAGCGTTTCGAAGCATGCCAGCAGAACCCAATGCT...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 72 bp GGGCACAGCAGCCTCTGCGTACAGGTGAATGTCGTCTaGGATACTCTGTGCTGGCCAGAACCCAACCACACC +
Preference number: 4 (lower is better)
Translates to: GHSSLCVQVNVV*DTLCWPEPNHT
Trigger: GGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGACGACATTCACCTGTACGCAGAGGCTGCTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATCGTCCCTGAAATAAAGCGTGCTCTCCACAGGTaGCGACGGCCAAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: VCPERVRPLLSTIVPEIKRALHR*RRPRAT
Trigger: CGTGGCCCTTGGCCGTCGTCACCTGTGGAGAGCACG...CTTTATTTCAGGGACGATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR TCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMVLERG*HVVESP
Trigger: AGGAGACTCGACAACATGTCACCCGCGCTCCAAGAC...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGGTTGGGAAGCTTTCCTaGCTTGGGTGGAACCGGGGT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMVGKLS*LGWNRG
Trigger: ACCCCGGTTCCACCCAAGTCAGGAAAGCTTCCCAAC...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTGGCCAGCACGATGGTaGCCTGGTAAGGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMWPARW*PGKGPL
Trigger: AAGAGGACCCTTACCAGGGCACCATCGTGCTGGCCA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TGTTTTTCAATGCCCTTCACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCAGGTGGCTATGGGCTCTaGAGCCTGGGGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CFSMPFTRAYSRRSSTGPGGYGL*SLGHSS
Trigger: GCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACC...TGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTGAAGGGCATTGAAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCATTTCTCCACTCATCAGTCAGCCTGCGCAGGTCTaGGACGTCCAGCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: HKGILKAFFDRAISPLISQPAQV*DVQLLT
Trigger: AGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTG...ACTGATGAGTGGAGAAATGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGACAGGAGCCGGGCGGATaGCCTTGTACCGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRQEPGG*PCTAAC
Trigger: GCAGGCTGCGGTACAAGGGCATCCGCCCGGCTCCTG...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCCAGGAGCCGGGCGGATaGCCTTGTACCGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGSTLTQLQSQQNWRSRCQEPGG*PCTAAC
Trigger: GCAGGCTGCGGTACAAGGGCATCCGCCCGGCTCCTG...GCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTGCCCAGCTGAGAACCTaGTCAATCCTGGAAACAATT +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTAQLRT*SILETI
Trigger: AATTGTTTCCAGGATTGAGCAGGTTCTCAGCTGGGC...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTCTCCTAGTGGCCACATaGAAGAGTTTGCTGGACATA +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTLLVAT*KSLLDI
Trigger: TATGTCCAGCAAACTCTTGCATGTGGCCACTAGGAG...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTCATGCGGCAGAGAAGACGTaGTCTCCACAGGTGACGACG +
Preference number: 4 (lower is better)
Translates to: PRHPEVLWPALGMLQQAHAAEKT*SPQVTT
Trigger: CGTCGTCACCTGTGGAGAGCACGTCTTCTCTGCCGC...ATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTCGAAACGCTCTTCATTaGTTTCTCGGCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTRNALH*FLGIAL
Trigger: GAGTGCAATGCCGAGAAAGCAATGAAGAGCGTTTCG...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCAGGCATGTGACACTGTaGCCAGCTCTTCTTGACGTT +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSRHVTL*PALLDV
Trigger: AACGTCAAGAAGAGCTGGGCACAGTGTCACATGCCT...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTCATGCAAGAGTTTGCTaGACATACAGGTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTHARVC*TYRWEL
Trigger: CAACTCCCACCTGTATGTCCAGCAAACTCTTGCATG...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTACCCGGCCAGTCCTTaGTGTCGGCCTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCYPASP*CRPSSQ
Trigger: CTGGCTGCTAGGCCGACACCAAGGACTGGCCGGGTA...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGTTCAGATACCCGGCCAGTCCTTaGTGTCGGCCTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VFKDLGPNKRGLHWVRFRYPASP*CRPSSQ
Trigger: CTGGCTGCTAGGCCGACACCAAGGACTGGCCGGGTA...TCTGAACCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp ACAGAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCGGCCTCTCTCGGGGCTaGGCGCGGCAACTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TELQKFLMDIIIHREVSSGLSRG*ARQLLE
Trigger: CTCCAGCAGTTGCCGCGCCCAGCCCCGAGAGAGGCC...GCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTCTCTTAATTCCTGTCTaGAGAGTTACCTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTLLIPV*RVTSSA
Trigger: TGCCGAGGAGGTAACTCTCCAGACAGGAATTAAGAG...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGCCAAAGCCTGGTATCTaGGCACTGCTGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMPKPGI*ALLAAA
Trigger: TGCTGCTGCCAGCAGTGCCCAGATACCAGGCTTTGG...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 72 bp GGTCACGGGGAGATGGTTATTCAGGCAGCAGGAGGATaGAGGCGGGGGTGTAAAGAATCAGAGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: GHGEMVIQAAGG*RRGCKESESPL
Trigger: GAGTGGGCTCTCTGATTCTTTACACCCCCGCCTCAATCCTCCTGCTGCCTGAATAACCATCTCCCCGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTAGTATCTCCTCTCCTTaGGAGACTCATAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTSISSP*ETHNGP
Trigger: AGGACCATTATGAGTCTCTCAAGGAGAGGAGATACT...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GGCATCATCGTAGACCTTCCTGGCCTCTCCACCTACTGTTTTGTCGTTAAATATCGTGCTCTCCACAGGTaGCGACGGCCAAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: GIIVDLPGLSTYCFVVKYRALHR*RRPRAT
Trigger: CGTGGCCCTTGGCCGTCGTCACCTGTGGAGAGCACG...ATATTTAACGACAAAACAGTAGGTGGAGAGGCCAGGAAGGTCTACGATGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAACTCGATTCGGGTACTTaGCCCGGAGCTGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQLDSGT*PGAARH
Trigger: ATGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAG...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GAGTGGTTCTCCATGAGACACGCTGATGACAAATCCCTCTCCTGTCTGTCCGGAAACTGCTGGAGCACGTaGTTTCTTCCCGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: EWFSMRHADDKSLSCLSGNCWST*FLPGYP
Trigger: CGGGTACCCGGGAAGAAAGCACGTGCTCCAGCAGTT...TCCGGACAGACAGGAGAGGGATTTGTCATCAGCGTGTCTCATGGAGAACCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR GCA 90 bp TCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGCTCCAGGGCGGCAGAGAAGACGTaGTCTCCACAGGTGACGACG +
Preference number: 4 (lower is better)
Translates to: SSEGEGQVGKTSTYSGSRAAEKT*SPQVTT
Trigger: CGTCGTCACCTGTGGAGAGCACGTCTTCTCTGCCGC...CCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGCCTCCAACCCACAGCTaGTCCCCTGCTGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRPPTHS*SPAGSP
Trigger: GGGGGAGCCAGCAGGGGAGCAGCTGTGGGTTGGAGG...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAAGCAAGTATTCCGGGTTaGGACAGGTCTTGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQASIPG*DRSWSA
Trigger: CGCGCTCCAAGACCTGTCGCAACCCGGAATACTTGC...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674797.2
CDS-3UTR CCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSTMHFP*QHFNPA
Trigger: AGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGT...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CCTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGATGGGCTCTGCAGCCTaGGGCACAGCAGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: PWQHFNPASITAKLEESMMGSAA*GTAASA
Trigger: CGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCAT...CATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTATGGGCTCTGCAGCCTaGGGCACAGCAGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFMGSAA*GTAASA
Trigger: CGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCAT...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAACATAGAAGGTGGCTATaGGCTCTGCAGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQHRRWL*ALQPGA
Trigger: TGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATG...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTACATAGAAGGTGGCTATaGGCTCTGCAGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVHRRWL*ALQPGA
Trigger: TGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATG...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATTGTGGTCGGGCTGGCTaGGGTAGCCAGGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHCGRAG*GSQEPG
Trigger: GCCCGGCTCCTGGCTACCCCAGCCAGCCCGACCACA...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCCATGCAAGAGTTTGCTaGACATACAGGTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSHARVC*TYRWEL
Trigger: CAACTCCCACCTGTATGTCCAGCAAACTCTTGCATG...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CAAATCCCTCTCCTGTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATCGCGTGACATCCGGCTCTaGGCCCCGCAGACATTTAGA +
Preference number: 4 (lower is better)
Translates to: QIPLLSVRKESAHFYQRSRDIRL*APQTFR
Trigger: TCTAAATGTCTGCGGGGCTCAGAGCCGGATGTCACG...CGATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGACAGGAGAGGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGAAGGCCCGGGTCTTTTaGCGCCTCCCGTTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRKARVF*RLPLAR
Trigger: GCGAGCCAACGGGAGGCGTCAAAAGACCCGGGCCTT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAATGCGTACTTCACCTTGTAAAGGCCCGGGTCTTTTaGCGCCTCCCGTTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: GLLLVCFNKLIKCVLHLVKARVF*RLPLAR
Trigger: GCGAGCCAACGGGAGGCGTCAAAAGACCCGGGCCTT...TACAAGGTGAAGTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR TCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTAAGTATTTGTTTCAATaGTATCTGCCCCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTKYLFQ*YLPQPA
Trigger: TGCTGGCTGGGGCAGATATCATTGAAACAAATACTT...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTCCCACTGTGAGAACATaGGAAGCTGGCCGCTGCATC +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCPTVRT*EAGRCI
Trigger: GATGCAGCGGCCAGCTTCTCATGTTCTCACAGTGGG...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GACCATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCCCAGGTAGTCACGGATaGCAGAATGCAAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: DHDAAVVVTIILIGLAQLPGSHG*QNARER
Trigger: TCGCTCCCTTGCATTCTGGCATCCGTGACTACCTGG...GAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTACAATTTTTCACAGCTTCCAGGAGCCGGGCGGATaGCCTTGTACCGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SFKSSGRWNSRLTIFHSFQEPGG*PCTAAC
Trigger: GCAGGCTGCGGTACAAGGGCATCCGCCCGGCTCCTG...GAAGCTGTGAAAAATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGACTGCAGGAAGACCCTaGTCCTCTACAAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMTAGRP*SSTRFH
Trigger: GTGGAACCTTGTAGAGGAGCAGGGTCTTCCTGCAGT...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTACCCAGAAAGCATGGCTaGTTGACCACACTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVPRKHG*LTTLGQ
Trigger: TTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGG...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCAACCTCAGCCACAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCAGCGCCAGGCGAGCCTaGCACACAAGGCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LNLSHRYVLPQCIILNLISARRA*HTRPGS
Trigger: AGACCCGGGCCTTGTGTGGCAGGCTCGCCTGGCGCT...GATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTGTGGCTGAGGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp CCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGCGGCAGAGAAGACGTaGTCTCCACAGGTGACGACG +
Preference number: 4 (lower is better)
Translates to: PCIASRMASIPRKEKDKLAAEKT*SPQVTT
Trigger: CGTCGTCACCTGTGGAGAGCACGTCTTCTCTGCCGC...CAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCCCTCCAACCCACAGCTaGTCCCCTGCTGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIPPTHS*SPAGSP
Trigger: GGGGGAGCCAGCAGGGGAGCAGCTGTGGGTTGGAGG...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTGCAGCATTGGGTTCTaGTGGCATGCTTCGAAACGC +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMCSIGF*WHASKR
Trigger: GCGTTTCGAAGCATGCCAGCAGAACCCAATGCTGCA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTAGCAGGGCTGCCAATATaGTGTCTTCACGGGACGGTA +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVAGLPI*CLHGTV
Trigger: TACCGTCCCGTGAAGACAGCATATTGGCAGCCCTGC...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GACCATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCACACCACCACACTCTTaGACGCGTCCAGGACATGGA +
Preference number: 4 (lower is better)
Translates to: DHDAAVVVTIILIGLAQLTPPHS*TRPGHG
Trigger: TCCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGT...GAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATGGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGATGGGCTCTGCAGCCTaGGGCACAGCAGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRMGSAA*GTAASA
Trigger: CGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCAT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTGTGGTCGGGCTGGCTaGGGTAGCCAGGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQCGRAG*GSQEPG
Trigger: GCCCGGCTCCTGGCTACCCCAGCCAGCCCGACCACA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTTTGTTGCTTGAGTGGTaGCACCATTCTTCATTACTG +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTLLLEW*HHSSLL
Trigger: CAGTAATGAAGAATGGTGCCACCACTCAAGCAACAA...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTGGGCGCGGCAACTGCTaGAGCACGTGCTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFGRGNC*STCFLP
Trigger: GGGAAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCC...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGGCCTCTCTCGGGGCTaGGCGCGGCAACTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPGLSRG*ARQLLE
Trigger: CTCCAGCAGTTGCCGCGCCCAGCCCCGAGAGAGGCC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GTCATAGTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGGGTTGCGACAGGTCTTaGAGCGCGGGTGACATGTTG +
Preference number: 4 (lower is better)
Translates to: VIVFKDLGPNKRGLHWVRGCDRS*SAGDML
Trigger: CAACATGTCACCCGCGCTCCAAGACCTGTCGCAACC...CCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGACTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGTTCAGATCTCCCGCTGGATCATaGTCCCCATCCCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: VFKDLGPNKRGLHWVRFRSPAGS*SPSLHP
Trigger: TGGATGGAGGGATGGGGACCATGATCCAGCGGGAGA...TCTGAACCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTTGACATCCAACACCTaGGCTCCCATTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMLTSNT*APISTC
Trigger: GCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCCCACTTTTTCTGGCTTaGCTTAAGGGTAAGTATCTC +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSPLFLA*LKGKYL
Trigger: GAGATACTTACCCTTAAGTCAAGCCAGAAAAAGTGG...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TCCATGTTGACATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTGGCAACAGGGAGCGATGAAGTCTaGGAGGCAGTAGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: SMLTSNTWAPISTCTLATGSDEV*EAVVWL
Trigger: GAGCCATACTACTGCCTCTCAGACTTCATCGCTCCC...TGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAACATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGACGAGTCTCCACATGGTaGGCTTCTCGGTGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRRVSTW*ASRCGR
Trigger: CCGACCACACCGAGAAGCTCACCATGTGGAGACTCG...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCAGAGGAGGACGACGTaGCATCCGGCTCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPQRRTT*HPALSP
Trigger: GGGGCTCAGAGCCGGATGTCACGTCGTCCTCCTCTG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp ATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATAAGGCCCGGGTCTTTTaGCGCCTCCCGTTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: MDIIIHREVSSIHYPHVHKARVF*RLPLAR
Trigger: GCGAGCCAACGGGAGGCGTCAAAAGACCCGGGCCTT...ATGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp AAGATATCAACCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KISTPPSRSPLACSWYASVLERG*HVVESP
Trigger: AGGAGACTCGACAACATGTCACCCGCGCTCCAAGAC...TGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGATATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR TCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAGGGCCCCTGCCCTCATaGGGCTTTACAGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRGPLPS*GFTVCS
Trigger: AGAGCAGACTGTAAAGCCTCATGAGGGCAGGGGCCC...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAAGCACAAAGGTACCTTTaGGATGTCTGGCTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQAQRYL*DVWLGS
Trigger: GCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGC...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CACTGCCACAGTAGGCCCACAGTTCTCGGCGAACTCTTTCATGGAGCTCTTCTGCTCCAACTATGTTCTTaGCTATGTCGTGCACGTCGC +
Preference number: 4 (lower is better)
Translates to: HCHSRPTVLGELFHGALLLQLCS*LCRARR
Trigger: GCGACGTGCACGACATAGGCAAGAACATAGTTGGAG...CAGAAGAGCTCCATGAAAGAGTTCGCCGAGAACTGTGGGCCTACTGTGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGGGGCACAGCAGCCTCTaGGTACAGGTGAATGTCGTC +
Preference number: 4 (lower is better)
Translates to: REVSSIHYPHVHARLDCMGHSSL*VQVNVV
Trigger: GACGACATTCACCTGTACGCAGAGGCTGCTGTGCCC...CATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGAAACCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGGGTGGCTATGGGCTCTaGAGCCTGGGGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWGGYGL*SLGHSS
Trigger: GCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACC...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp ACTATGTTCTTGCCTATGTCGTGCACGTCGCCTTTAACAGTGGCCAGCACGATGCCAGGTAGTCACGGATaGCAGAATGCAAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: TMFLPMSCTSPLTVASTMPGSHG*QNARER
Trigger: TCGCTCCCTTGCATTCTGGCATCCGTGACTACCTGG...CATCGTGCTGGCCACTGTTAAAGGCGACGTGCACGACATAGGCAAGAACATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCTTCTGCAAAGGCCTCTaGCAGCCGGTCCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPFCKGL*QPVPQR
Trigger: GCGCTGGGGGACCGGCTGGCAGAGGCCTTTGCAGAA...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTTTCTGCAAAGGCCTCTaGCAGCCGGTCCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: ELQKFLMDIIIHREVSSIFCKGL*QPVPQR
Trigger: GCGCTGGGGGACCGGCTGGCAGAGGCCTTTGCAGAA...AATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTTCATGGAGCTCTTCTaGAAAGGCCTCTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCFMELF*KGLCQP
Trigger: CGGCTGGCAGAGGCCTTTGCAGAAGAGCTCCATGAA...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ATGCACTTCCCTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGCCTTGTACCGCAGCCTaGGCAGGTCTGCGACGTCCA +
Preference number: 4 (lower is better)
Translates to: MHFPWQHFNPASITAKLEPCTAA*AGLRRP
Trigger: TGGACGTCGCAGACCTGCGCAGGCTGCGGTACAAGG...CTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCAGGAGCCGGGCGGATaGCCTTGTACCGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQQEPGG*PCTAAC
Trigger: GCAGGCTGCGGTACAAGGGCATCCGCCCGGCTCCTG...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAAAGACTGCTCGATGTCTaGGAGTCTCCACATGGTGAG +
Preference number: 4 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQRLLDV*ESPHGE
Trigger: CTCACCATGTGGAGACTCGCAGACATCGAGCAGTCT...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGCTAATGCCTGTAGACTaGTCGATGTCTGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMLMPVD*SMSASL
Trigger: GAGACTCGCAGACATCGAGCAGTCTACAGGCATTAG...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GTCATAGTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGCTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VIVFKDLGPNKRGLHWVRLFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...CCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGACTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTGCCAAAGGGAGTTCTaGAGCCATTTAGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMCQREF*SHLVQP
Trigger: AGGCTGGACTAAATGGCTGCAGAACTCCCTTTGGCA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CACCACACTCTTGGACGCGTCCAGGACATGGATTACAGGTGCACTGTATCTCGGCAAGCAGTGAGCGCATaGCTTTTGCCAAAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: HHTLGRVQDMDYRCTVSRQAVSA*LLPKGV
Trigger: AACTCCCTTTGGCAAAAGGCATGCGCTCACTGCTTG...CCGAGATACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGATGGGAGGACGAAAATaGCCAGAAAGCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMMGGRK*PESMAA
Trigger: AGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCCAT...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGAACTGCTGGAGCACGTaGTTTCTTCCCGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: REVSSIHYPHVHARLDCMNCWST*FLPGYP
Trigger: CGGGTACCCGGGAAGAAAGCACGTGCTCCAGCAGTT...CATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGAAACCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTGCTGGGCGCGGCAACTaGTGGAGCACGTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFAGRGN*WSTCFL
Trigger: AAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCCAGC...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTTTTCTGGCCACTCCTaGAGAGCACATGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMFSGHS*RAHVHP
Trigger: CGGATGAACATGTGCTCTGCAGGAGTGGCCAGAAAA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACCGGACCCAGAGCCCCTaGCACAAACCTCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYRTQSP*HKPLNS
Trigger: GGAATTAAGAGGTTTGTGGCAGGGGCTCTGGGTCCG...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CACCACACTCTTGGACGCGTCCAGGACATGGATTACAGGTGCACTGTATCTCGGGGTGTTGGGAAGACCTaGATTGGGATAACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: HHTLGRVQDMDYRCTVSRGVGKT*IGITED
Trigger: GTCCTCTGTTATCCCAATGCAGGTCTTCCCAACACC...CCGAGATACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651455.1
CDS-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTTGTGTCTGTTTCTGTTaGCTGTCCTTCTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTCVCFC*LSFFIK
Trigger: TTTGATGAAGAAGGACAGGCAACAGAAACAGACACA...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCTGTCCTTTTTCTCTTTaGCGAGTTTCTCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSCPFSL*RVSLWE
Trigger: TTCCCAGAGAGAAACTCGGCAAAGAGAAAAAGGACA...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGGCATTGCTTCTCGAATaGCTTCCATTCCTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMALLLE*LPFLGR
Trigger: CCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGC...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCAATGGGCTCTGCAGCCTaGGGCACAGCAGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: YGYHHTQGGFQHSLSPCPMGSAA*GTAASA
Trigger: CGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCAT...TGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTGTGGTCGGGCTGGCTaGGGTAGCCAGGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQACGRAG*GSQEPG
Trigger: GCCCGGCTCCTGGCTACCCCAGCCAGCCCGACCACA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTGTGGTCGGGCTGGCTaGGGTAGCCAGGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFCGRAG*GSQEPG
Trigger: GCCCGGCTCCTGGCTACCCCAGCCAGCCCGACCACA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTTTTGGGAGGCTGAGGTaGGCAGATCACGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFFGRLR*ADHEVG
Trigger: CCCGACCTCGTGATCTGCCCACCTCAGCCTCCCAAA...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCATAGTACGCCCCATGTaGTCTCTTCAAACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSIVRPM*SLQTCF
Trigger: AAAGCAAGTTTGAAGAGACCACATGGGGCGTACTAT...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAATGCGTACTTCACCTTGTATACCCGGCCAGTCCTTaGTGTCGGCCTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLLLVCFNKLIKCVLHLVYPASP*CRPSSQ
Trigger: CTGGCTGCTAGGCCGACACCAAGGACTGGCCGGGTA...TACAAGGTGAAGTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCGGCCTCTCTCGGGGCTaGGCGCGGCAACTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFGLSRG*ARQLLE
Trigger: CTCCAGCAGTTGCCGCGCCCAGCCCCGAGAGAGGCC...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR CAA 72 bp ATTGGGTTCTGCTGGCATGCTTCGAAACGCTCTTCATaGCTTTCTCGGCATTGCACTCTCCCTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IGFCWHASKRSS*LSRHCTLPPGF
Trigger: GAAGCCAGGAGGGAGAGTGCAATGCCGAGAAAGCAATGAAGAGCGTTTCGAAGCATGCCAGCAGAACCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 72 bp GAGCTAAGACTGGAGGGGTCAGGGGCAACTCCCAGGTaGATGGTGTTACTGACTGGCAGAAGAAATTCAGTC +
Preference number: 4 (lower is better)
Translates to: ELRLEGSGATPR*MVLLTGRRNSV
Trigger: GACTGAATTTCTTCTGCCAGTCAGTAACACCATCAACCTGGGAGTTGCCCCTGACCCCTCCAGTCTTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 72 bp CTGGCCTCTCCACCTACTGTTTTGTCGTTAAATATCTaGGGAAAGCCTCGATTCGGGTACTTGCCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LASPPTVLSLNI*GKPRFGYLPRS
Trigger: GCTCCGGGGCAAGTACCCGAATCGAGGCTTTCCCAAGATATTTAACGACAAAACAGTAGGTGGAGAGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
3UTR CAA 72 bp CCAGAACCCAACCACACCCCGGGCCCGGAGTTTCTTTaGACTAATCAGTGTGTTCAGCATATTGTGGGCATC +
Preference number: 4 (lower is better)
Translates to: PEPNHTPGPEFL*TNQCVQHIVGI
Trigger: GATGCCCACAATATGCTGAACACACTGATTAGTCAAAAGAAACTCCGGGCCCGGGGTGTGGTTGGGTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTGTCCTTCAATTATATTaGGAGGTCGGGGATATTTTT +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTVLQLY*EVGDIF
Trigger: AAAAATATCCCCGACCTCTCAATATAATTGAAGGAC...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAGTGGGCTTCACTGGGTaGGGTTCAGACAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRVGFTG*GSDSQS
Trigger: GGATTGGCTGTCTGAACCTCACCCAGTGAAGCCCAC...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CATGGTAAAGGAAAACCCCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAGTGGGCTTCACTGGGTaGGGTTCAGACAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: HGKGKPHALLLEWLPFLGVGFTG*GSDSQS
Trigger: GGATTGGCTGTCTGAACCTCACCCAGTGAAGCCCAC...TCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCCTTTACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp TTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCGGGAGCGATGAAGTCTaGGAGGCAGTAGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: FSNGFHSSEGEGQVGKTSGSDEV*EAVVWL
Trigger: GAGCCATACTACTGCCTCTCAGACTTCATCGCTCCC...GGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTCCTTCCTGTCCCCACTaGCTTGCCATGTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFPSCPH*LAMSPG
Trigger: ACCTGGTGACATGGCAAGTCAGTGGGGACAGGAAGG...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AGTTTAGCAAACTTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGTTAACACGTGCTCTCCACAGGTaGCGACGGCCAAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: SLANFLDPATLQRSPMLTRALHR*RRPRAT
Trigger: CGTGGCCCTTGGCCGTCGTCACCTGTGGAGAGCACG...TGTTAACATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR TCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTCGTGCTCTCCACAGGTaGCGACGGCCAAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQARALHR*RRPRAT
Trigger: CGTGGCCCTTGGCCGTCGTCACCTGTGGAGAGCACG...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CACCACACTCTTGGACGCGTCCAGGACATGGATTACAGGTGCACTGTATCTCGGCAGAGTGGTTCTCCATaGGACACGCTGATGACAAAT +
Preference number: 4 (lower is better)
Translates to: HHTLGRVQDMDYRCTVSRQSGSP*DTLMTN
Trigger: ATTTGTCATCAGCGTGTCTCATGGAGAACCACTCTG...CCGAGATACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAAGATATGATCTGGTGTTaGCCCACAGCATCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQDMIWC*PTASSN
Trigger: GTTGGAGGATGCTGTGGGTCAACACCAGATCATATC...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGGCAATTTCCCTGATATaGTCTGGTGTTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMAISLI*SGVDPQ
Trigger: CTGTGGGTCAACACCAGATCATATCAGGGAAATTGC...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGATTGAGGGGCTCACTGTaGGAAGGGCCCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRLRGSL*EGPSAI
Trigger: GATTGCTGAGGGCCCTTCTCACAGTGAGCCCCTCAA...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCCCCACCTCAGCCTCCTaGATAGCTGGGTTTACAGGC +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITPTSAS*IAGFTG
Trigger: GCCTGTAAACCCAGCTATTCAGGAGGCTGAGGTGGG...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTACTTGCCCCGGAGCTaGCAGACATCAAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCYLPRS*QTSKKG
Trigger: GCCTTTCTTTGATGTCTGGCAGCTCCGGGGCAAGTA...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCCTCGATTCGGGTACTTaGCCCGGAGCTGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITLDSGT*PGAARH
Trigger: ATGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAG...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCCTCGATTCGGGTACTTaGCCCGGAGCTGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: LGSTLTQLQSQQNWRSRCLDSGT*PGAARH
Trigger: ATGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAG...GCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAGGGCACAGCAGCCTCTaGGTACAGGTGAATGTCGTC +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRGHSSL*VQVNVV
Trigger: GACGACATTCACCTGTACGCAGAGGCTGCTGTGCCC...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAGGGCACAGCAGCCTCTaGGTACAGGTGAATGTCGTC +
Preference number: 4 (lower is better)
Translates to: CIASRMASIPRKEKDKLEGHSSL*VQVNVV
Trigger: GACGACATTCACCTGTACGCAGAGGCTGCTGTGCCC...TTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGGTGGCTATGGGCTCTaGAGCCTGGGGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPGGYGL*SLGHSS
Trigger: GCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGCTCCAGGAGTAGTATGGCTCCGTaGTGGCAGAGTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SSEGEGQVGKTSTYSGSRSSMAP*WQSPSQ
Trigger: CTGAGAAGGACTCTGCCAGCACGGAGCCATACTACT...CCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp ATGATGAGTTTAGCAAACTTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGTTCTGCAAAGGCCTCTaGCAGCCGGTCCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: MMSLANFLDPATLQRSPMFCKGL*QPVPQR
Trigger: GCGCTGGGGGACCGGCTGGCAGAGGCCTTTGCAGAA...CATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACTCATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTCGTCCAGCTGCTCACTaGCACAGTAGGCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFRPAAH*HSRPTV
Trigger: AACTGTGGGCCTACTGTGGCAGTGAGCAGCTGGACG...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp ACAAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGCAGCCTGCGCAGGTCTaGGACGTCCAGCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: TKVPLRCLARKQLSCKIWQPAQV*DVQLLT
Trigger: AGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTG...CCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGCAGCCTGCGCAGGTCTaGGACGTCCAGCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWQPAQV*DVQLLT
Trigger: AGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTG...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCCTTGTACCGCAGCCTaGGCAGGTCTGCGACGTCCA +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPPCTAA*AGLRRP
Trigger: TGGACGTCGCAGACCTGCGCAGGCTGCGGTACAAGG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGCTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: REVSSIHYPHVHARLDCMLFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...CATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGAAACCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGGAGTTTGAGGCTTGTTaGTTGAGTGGTGGCACCATT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMEFEAC*LSGGTI
Trigger: AATGGTGCCACCACTCAAGCAACAAGCCTCAAACTC...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTTTTTTAAAGCAGTGGTaGCTGTTTACACATCCACAA +
Preference number: 4 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTFLKQW*LFTHPQ
Trigger: TTGTGGATGTGTAAACAGGCACCACTGCTTTAAAAA...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCAGCGCCAGGCGAGCCTaGCACACAAGGCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFSARRA*HTRPGS
Trigger: AGACCCGGGCCTTGTGTGGCAGGCTCGCCTGGCGCT...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCACTTCAGACCTTCGGGTTaGGACAGGTCTTGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: WQHFNPASITAKLEESMHFRPSG*DRSWSA
Trigger: CGCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAA...GTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TCAACCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTTTTCTGGCCACTCCTaGAGAGCACATGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: STPPSRSPLACSWYASTSFSGHS*RAHVHP
Trigger: CGGATGAACATGTGCTCTGCAGGAGTGGCCAGAAAA...GCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CCA 90 bp GCAACATTACAGCGCTCTCCAATGTTAACAAAGTTGGTGTACGGTCCAATCCTGCAGTGGCCAGCACGATaGTGCCCTGGTAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: ATLQRSPMLTKLVYGPILQWPAR*CPGKGP
Trigger: AGGACCCTTACCAGGGCACCATCGTGCTGGCCACTG...CAGGATTGGACCGTACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp CATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCAAACGTGGGCTTCACTaGGTGAGGTTCAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: HDAAVVVTIILIGLAQLFKRGLH*VRFRQP
Trigger: TGGCTGTCTGAACCTCACCCAGTGAAGCCCACGTTT...GAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGATGGGCTCTGCAGCCTaGGGCACAGCAGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQMGSAA*GTAASA
Trigger: CGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCAT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGCTCCAGGAATGCCCAGAAAGCATaGCTGCTTGACCACACTGGG +
Preference number: 4 (lower is better)
Translates to: SSEGEGQVGKTSTYSGSRNAQKA*LLDHTG
Trigger: CCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATT...CCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp AGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCACAAAGGTACCTTTGCGATGGGCGCGGCAACTGCTaGAGCACGTGCTTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SFNHSKIGGVDAQRYLCDGRGNC*STCFLP
Trigger: GGGAAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCC...ATCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTGGTTGCGACAGGTCTTaGAGCGCGGGTGACATGTTG +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFGCDRS*SAGDML
Trigger: CAACATGTCACCCGCGCTCCAAGACCTGTCGCAACC...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGATCTCCCGCTGGATCATaGTCCCCATCCCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRSPAGS*SPSLHP
Trigger: TGGATGGAGGGATGGGGACCATGATCCAGCGGGAGA...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000650888.1
CDS-3UTR CCA 90 bp CCAATGTTAACAAAGTTGGTGTACGGTCCAATCCTGAAGGGCTCTAGACCAGACTCTCCCGCTGGATCATaGTCCCCATCCCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: PMLTKLVYGPILKGSRPDSPAGS*SPSLHP
Trigger: TGGATGGAGGGATGGGGACCATGATCCAGCGGGAGA...GTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACACCAACTTTGTTAACATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CCA 90 bp TCCATGTTGACATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTGGCAACACGGCCTTTCCACAGATaGGGACACAGAGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SMLTSNTWAPISTCTLATRPFHR*GHRECL
Trigger: AAGACACTCTCTGTGTCCCCATCTGTGGAAAGGCCG...TGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAACATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTGTATCTGGGCACTGCTaGCAGCAGCAAGGATGCACC +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFVSGHC*QQQGCT
Trigger: GGTGCATCCTTGCTGCTGCCAGCAGTGCCCAGATAC...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGATGGGTGGAACCGGGGTaGGGTTATTCCAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRWVEPG*GYSRQR
Trigger: CCTCTGTCTGGAATAACCCCACCCCGGTTCCACCCA...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCCATTTACCTTATGGATaGCAGAGATTGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSHLPYG*QRLSVI
Trigger: GATCACAGACAATCTCTGCCATCCATAAGGTAAATG...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGAGTATCTCCTCTCCTTaGGAGACTCATAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMSISSP*ETHNGP
Trigger: AGGACCATTATGAGTCTCTCAAGGAGAGGAGATACT...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCGGGAGCGATGAAGTCTaGGAGGCAGTAGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITGSDEV*EAVVWL
Trigger: GAGCCATACTACTGCCTCTCAGACTTCATCGCTCCC...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCCGAGTCTCCACATGGTaGGCTTCTCGGTGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: KGTFAMSGSEAIKLQNLVRVSTW*ASRCGR
Trigger: CCGACCACACCGAGAAGCTCACCATGTGGAGACTCG...GACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTTGAGGCTTGTTGCTTaGGTGGTGGCACCATTCTTC +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCLRLVA*VVAPFF
Trigger: GAAGAATGGTGCCACCACTCAAGCAACAAGCCTCAA...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGAATGTTACCTTCTCCTaGCTATTGCCACCACCATCT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMNVTFS*LLPPPS
Trigger: AGATGGTGGTGGCAATAGTCAGGAGAAGGTAACATT...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CCAGACAGTAACATATGTCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTAGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PDSNICPSKAVAGGTLGLVLERG*HVVESP
Trigger: AGGAGACTCGACAACATGTCACCCGCGCTCCAAGAC...TAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGACATATGTTACTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR TCA 90 bp TCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGCTCCAGGGATATGATCTGGTGTTaGCCCACAGCATCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: SSEGEGQVGKTSTYSGSRDMIWC*PTASSN
Trigger: GTTGGAGGATGCTGTGGGTCAACACCAGATCATATC...CCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACGATATGATCTGGTGTTaGCCCACAGCATCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYDMIWC*PTASSN
Trigger: GTTGGAGGATGCTGTGGGTCAACACCAGATCATATC...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTAAAAATCGCCAGGGCTTaGGAACCAACTGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVKIARA*EPTGCE
Trigger: TTCACATCCAGTTGGTTCTCAAGCCCTGGCGATTTT...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTAGGGCTTCCAAGACATaGGGCAGGGTCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFRASKT*GRVRHG
Trigger: TCCATGTCTGACCCTGCCTCATGTCTTGGAAGCCCT...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAAGGGCCGCATCTAATATaGAATACTGAAGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQGPHLI*NTEGGC
Trigger: ACACCCACCTTCAGTATTTCATATTAGATGCGGCCC...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGGAAAACCCCATGCATTaGTTCTCGAATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMENPMH*FSNGFH
Trigger: ATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTC...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CGGAAATTATTGCAGCCAAGGACTACTCCAACTATGTTCTTGCCTATGTCGTGCTGGCCAGCACGATGGTaGCCTGGTAAGGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RKLLQPRTTPTMFLPMSCWPARW*PGKGPL
Trigger: AAGAGGACCCTTACCAGGGCACCATCGTGCTGGCCA...GCACGACATAGGCAAGAACATAGTTGGAGTAGTCCTTGGCTGCAATAATTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATTCTTGCCTATGTCGTaGACGTCGCCTTTAACAGTG +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVFLPMS*TSPLTV
Trigger: CACTGTTAAAGGCGACGTGCACGACATAGGCAAGAA...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTGGTGGCTATGGGCTCTaGAGCCTGGGGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAGGYGL*SLGHSS
Trigger: GCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACC...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AGTAACATATGTCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTACAATTTGGTGGCTATGGGCTCTaGAGCCTGGGGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SNICPSKAVAGGTLGLQFGGYGL*SLGHSS
Trigger: GCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACC...AAATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGACATATGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGGGTGGCTATGGGCTCTaGAGCCTGGGGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGGGYGL*SLGHSS
Trigger: GCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACC...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTCACGGATGCCAGAATaGAAGGGAGCGATGAAGTCT +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCSRMPE*KGAMKS
Trigger: AGACTTCATCGCTCCCTTGCATTCTGGCATCCGTGA...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTTCTGCAAAGGCCTCTaGCAGCCGGTCCCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFFCKGL*QPVPQR
Trigger: GCGCTGGGGGACCGGCTGGCAGAGGCCTTTGCAGAA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATGGTAAAGGAAAACCCCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGATTCATGGAGCTCTTCTaGAAAGGCCTCTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: HGKGKPHALLLEWLPFLGFMELF*KGLCQP
Trigger: CGGCTGGCAGAGGCCTTTGCAGAAGAGCTCCATGAA...TCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCCTTTACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCACCTTGTACCGCAGCCTaGGCAGGTCTGCGACGTCCA +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPPCTAA*AGLRRP
Trigger: TGGACGTCGCAGACCTGCGCAGGCTGCGGTACAAGG...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCAGGAGCCGGGCGGATaGCCTTGTACCGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFQEPGG*PCTAAC
Trigger: GCAGGCTGCGGTACAAGGGCATCCGCCCGGCTCCTG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGACTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRLFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GTCGTCCTCTCCTTCCTTCAGACTAATGCTATTGACAATGCACTTCCCTTGGCAAGGAACCCTGCTCACTaGTCTTCACGCAAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: VVLSFLQTNAIDNALPLARNPAH*SSRKVP
Trigger: TGGGACCTTGCGTGAAGAGCAGTGAGCAGGGTTCCT...TGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCTGAAGGAAGGAGAGGACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCCCCAGAAAGCATGGCTaGTTGACCACACTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LGSTLTQLQSQQNWRSRCPRKHG*LTTLGQ
Trigger: TTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGG...GCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTAGAGTTTGAGGCTTGTTaGTTGAGTGGTGGCACCATT +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVEFEAC*LSGGTI
Trigger: AATGGTGCCACCACTCAAGCAACAAGCCTCAAACTC...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCGCGGCAGAGAAGACGTaGTCTCCACAGGTGACGACG +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIAAEKT*SPQVTT
Trigger: CGTCGTCACCTGTGGAGAGCACGTCTTCTCTGCCGC...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAACGGACCCAGAGCCCCTaGCACAAACCTCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: CIASRMASIPRKEKDKLERTQSP*HKPLNS
Trigger: GGAATTAAGAGGTTTGTGGCAGGGGCTCTGGGTCCG...TTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTGCAAAGCCAGCTGTGTaGCAACAGTCCCCACAATCC +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFAKPAV*QQSPQS
Trigger: GGATTGTGGGGACTGTTGGCACACAGCTGGCTTTGC...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAATGCGTACTTCACGCAAGTATTCCGGGTTaGGACAGGTCTTGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: SFGLLLVCFNKLIKCVLHASIPG*DRSWSA
Trigger: CGCGCTCCAAGACCTGTCGCAACCCGGAATACTTGC...GTGAAGTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCAGTGGCCAGCACGATaGTGCCCTGGTAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPQWPAR*CPGKGP
Trigger: AGGACCCTTACCAGGGCACCATCGTGCTGGCCACTG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACACCACCACACTCTTaGACGCGTCCAGGACATGGA +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFTPPHS*TRPGHG
Trigger: TCCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGT...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCACACCACCACACTCTTaGACGCGTCCAGGACATGGA +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITTPPHS*TRPGHG
Trigger: TCCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTTTTCATCTAACAGCTaGGAACACACCACCACACTC +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMFSSNS*EHTTTL
Trigger: GAGTGTGGTGGTGTGTTCCCAGCTGTTAGATGAAAA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCTTTGGGAGGCTGAGGTaGGCAGATCACGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: KGTFAMSGSEAIKLQNLVFGRLR*ADHEVG
Trigger: CCCGACCTCGTGATCTGCCCACCTCAGCCTCCCAAA...GACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp ATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGAGGTTGCGACAGGTCTTaGAGCGCGGGTGACATGTTG +
Preference number: 4 (lower is better)
Translates to: IASRMASIPRKEKDKLERGCDRS*SAGDML
Trigger: CAACATGTCACCCGCGCTCCAAGACCTGTCGCAACC...TCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAATGCGTACTTCACGGTTGCGACAGGTCTTaGAGCGCGGGTGACATGTTG +
Preference number: 4 (lower is better)
Translates to: SFGLLLVCFNKLIKCVLHGCDRS*SAGDML
Trigger: CAACATGTCACCCGCGCTCCAAGACCTGTCGCAACC...GTGAAGTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CCA 90 bp ATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTTCTCCCGCTGGATCATaGTCCCCATCCCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: MASIPRKEKDKLERPPLISPAGS*SPSLHP
Trigger: TGGATGGAGGGATGGGGACCATGATCCAGCGGGAGA...AATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCTTTAGCTTCTCCCGCTaGATCATGGTCCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: FSNGFHSSEGEGQVGKTSFSFSR*IMVPIP
Trigger: AGGGATGGGGACCATGATCCAGCGGGAGAAGCTAAA...GGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTACTCTTAATTCCTGTCTaGAGAGTTACCTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVLLIPV*RVTSSA
Trigger: TGCCGAGGAGGTAACTCTCCAGACAGGAATTAAGAG...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GACCATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTGGGAAGACCTGCATTaGGATAACAGAGGACATAGG +
Preference number: 4 (lower is better)
Translates to: DHDAAVVVTIILIGLAQLWEDLH*DNRGHR
Trigger: CCTATGTCCTCTGTTATCCCAATGCAGGTCTTCCCA...GAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651455.1
CDS-3UTR CCA 90 bp AGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGTTGACATCCAACACCTaGGCTCCCATTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: REVSSIHYPHVHARLDCMLTSNT*APISTC
Trigger: GCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAA...CATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGAAACCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCTTGACATCCAACACCTaGGCTCCCATTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: FSNGFHSSEGEGQVGKTSLTSNT*APISTC
Trigger: GCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAA...GGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGCTCTGTCTTAGCAAATaGTCCAGCCATCCACTCATT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMLCLSK*SSHPLI
Trigger: AATGAGTGGATGGCTGGACCATTTGCTAAGACAGAG...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 72 bp TATGGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTaGACCACACTGGGGCAAATGGCTTCAGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: YGRTKMPRKHGC*TTLGQMASVFL
Trigger: CAGAAACACTGAAGCCATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
3UTR CAA 72 bp ATTGCACTTGGACCATCTAGCATGCCATCATCCATGTaGACATCCAACACCTGGGCTCCCATTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: IALGPSSMPSSM*TSNTWAPISTC
Trigger: GCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAACATGGATGATGGCATGCTAGATGGTCCAAGTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR CAA 72 bp TTTTCATCTAACAGCTGGGAACACACCACCACACTCTaGGACGCGTCCAGGACATGGATTACAGGTGCACTG +
Preference number: 4 (lower is better)
Translates to: FSSNSWEHTTTL*DASRTWITGAL
Trigger: CAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGTGTTCCCAGCTGTTAGATGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCATTTCTCCACTCATCAGTCTCCACTCATCAGTCTaGATGACTTTCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: HKGILKAFFDRAISPLISLHSSV*MTFFPP
Trigger: AGGAGGGAAGAAAGTCATTCAGACTGATGAGTGGAG...ACTGATGAGTGGAGAAATGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGCCACTTTTTCTGGCTTaGCTTAAGGGTAAGTATCTC +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMPLFLA*LKGKYL
Trigger: GAGATACTTACCCTTAAGTCAAGCCAGAAAAAGTGG...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATGTGGGCTTCACTGGGTaGGGTTCAGACAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHVGFTG*GSDSQS
Trigger: GGATTGGCTGTCTGAACCTCACCCAGTGAAGCCCAC...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGGTGGGCTTCACTGGGTaGGGTTCAGACAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWVGFTG*GSDSQS
Trigger: GGATTGGCTGTCTGAACCTCACCCAGTGAAGCCCAC...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCGCCTCTGCGTACAGGTaGATGTCGTCTTGGATACTC +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITASAYR*MSSWIL
Trigger: GAGTATCCAAGACGACATTCACCTGTACGCAGAGGC...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGGGGAGCGATGAAGTCTaGGAGGCAGTAGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRGSDEV*EAVVWL
Trigger: GAGCCATACTACTGCCTCTCAGACTTCATCGCTCCC...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCGAGTCTCCACATGGTaGGCTTCTCGGTGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCRVSTW*ASRCGR
Trigger: CCGACCACACCGAGAAGCTCACCATGTGGAGACTCG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAACTGACAAGCAAGCAGTaGGCGCATGCCTTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: CIASRMASIPRKEKDKLELTSKQ*AHAFCQ
Trigger: TTGGCAAAAGGCATGCGCTCACTGCTTGCTTGTCAG...TTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTCTGACAAGCAAGCAGTaGGCGCATGCCTTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFLTSKQ*AHAFCQ
Trigger: TTGGCAAAAGGCATGCGCTCACTGCTTGCTTGTCAG...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCATATCAGAGCCCAGCTaGGAACCTGCTCAATCCTGG +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITISEPS*EPAQSW
Trigger: CCAGGATTGAGCAGGTTCTCAGCTGGGCTCTGATAT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CACCACACTCTTGGACGCGTCCAGGACATGGATTACAGGTGCACTGTATCTCGGATGGTAAGAAATGAGTaGCTTTATGCTGCCCACTTG +
Preference number: 4 (lower is better)
Translates to: HHTLGRVQDMDYRCTVSRMVRNE*LYAAHL
Trigger: CAAGTGGGCAGCATAAAGTCACTCATTTCTTACCAT...CCGAGATACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTTGCCACCACCATCTTaGAGTAGGATGAGTGTATAT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMLPPPS*SRMSVY
Trigger: ATATACACTCATCCTACTTCAAGATGGTGGTGGCAA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATCCTTCCTGTCCCCACTaGCTTGCCATGTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHPSCPH*LAMSPG
Trigger: ACCTGGTGACATGGCAAGTCAGTGGGGACAGGAAGG...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCGTGACATCCGGCTCTaGGCCCCGCAGACATTTAGA +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPRDIRL*APQTFR
Trigger: TCTAAATGTCTGCGGGGCTCAGAGCCGGATGTCACG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCAGAGGAGGACGACGTaGCATCCGGCTCTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFQRRTT*HPALSP
Trigger: GGGGCTCAGAGCCGGATGTCACGTCGTCCTCCTCTG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCAGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: YGYHHTQGGFQHSLSPCPVLERG*HVVESP
Trigger: AGGAGACTCGACAACATGTCACCCGCGCTCCAAGAC...TGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTACTTCAGCAATTTCCCTaGTATGATCTGGTGTTGACC +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVLQQFP*YDLVLT
Trigger: GGTCAACACCAGATCATATCAGGGAAATTGCTGAAG...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGATGTACGGTCCAATCCTaGAGGGCTCTAGACCAGACA +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRCTVQS*RALDQT
Trigger: TGTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACA...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGTGCCATCATCCATGTTaGCATCCAACACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LPFLGRRRTSWKDLHLFWCHHPC*HPTPGL
Trigger: GAGCCCAGGTGTTGGATGTCAACATGGATGATGGCA...CCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCTTGAGGGGCTCACTGTaGGAAGGGCCCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPLRGSL*EGPSAI
Trigger: GATTGCTGAGGGCCCTTCTCACAGTGAGCCCCTCAA...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGACCCTCCACCCACTGTaGGAACATGAGAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWTLHPL*EHEKLA
Trigger: GGCCAGCTTCTCATGTTCTCACAGTGGGTGGAGGGT...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTAAAATCGCCAGGGCTTaGGAACCAACTGGATGTGAA +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCKIARA*EPTGCE
Trigger: TTCACATCCAGTTGGTTCTCAAGCCCTGGCGATTTT...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCGTTGGGAAGCTTTCCTaGCTTGGGTGGAACCGGGGT +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPVGKLS*LGWNRG
Trigger: ACCCCGGTTCCACCCAAGTCAGGAAAGCTTCCCAAC...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCCCACCTCAGCCTCCTaGATAGCTGGGTTTACAGGC +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPPTSAS*IAGFTG
Trigger: GCCTGTAAACCCAGCTATTCAGGAGGCTGAGGTGGG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCACGCACAAAGGTACCTTTaGGATGTCTGGCTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: WQHFNPASITAKLEESMHAQRYL*DVWLGS
Trigger: GCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGC...GTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTAAATTGGAGGAGTCGATaGACAAAGGTACCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVNWRSR*TKVPLR
Trigger: TCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATT...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp ACAAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGCTCGATTCGGGTACTTaGCCCGGAGCTGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: TKVPLRCLARKQLSCKIWLDSGT*PGAARH
Trigger: ATGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAG...CCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CCAATGTTAACAAAGTTGGTGTACGGTCCAATCCTGAAGGGCTCTAGACCAGACGTCTTGGATACTCTGTaGTGGCCAGAACCCAACCAC +
Preference number: 4 (lower is better)
Translates to: PMLTKLVYGPILKGSRPDVLDTL*WPEPNH
Trigger: GTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGAC...GTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACACCAACTTTGTTAACATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCGGGCACAGCAGCCTCTaGGTACAGGTGAATGTCGTC +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIGHSSL*VQVNVV
Trigger: GACGACATTCACCTGTACGCAGAGGCTGCTGTGCCC...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCAGTAGTATGGCTCCGTaGTGGCAGAGTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITSSMAP*WQSPSQ
Trigger: CTGAGAAGGACTCTGCCAGCACGGAGCCATACTACT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGTTCATGGAGCTCTTCTaGAAAGGCCTCTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRFMELF*KGLCQP
Trigger: CGGCTGGCAGAGGCCTTTGCAGAAGAGCTCCATGAA...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGATTCATGGAGCTCTTCTaGAAAGGCCTCTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: IASRMASIPRKEKDKLERFMELF*KGLCQP
Trigger: CGGCTGGCAGAGGCCTTTGCAGAAGAGCTCCATGAA...TCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp ACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCACGTCCAGCTGCTCACTaGCACAGTAGGCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: TFAMSGSEAIKLQNLVIARPAAH*HSRPTV
Trigger: AACTGTGGGCCTACTGTGGCAGTGAGCAGCTGGACG...TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TCTTTCTTTTTCCATGAAAGGGATAAGGTGGCCAACAGCCTTCTTCATAACCCGCGTCCAGCTGCTCACTaGCACAGTAGGCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: SFFFHERDKVANSLLHNPRPAAH*HSRPTV
Trigger: AACTGTGGGCCTACTGTGGCAGTGAGCAGCTGGACG...CGGGTTATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCATGGAAAAAGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCGTCCAGCTGCTCACTaGCACAGTAGGCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPRPAAH*HSRPTV
Trigger: AACTGTGGGCCTACTGTGGCAGTGAGCAGCTGGACG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCAGCCTGCGCAGGTCTaGGACGTCCAGCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFQPAQV*DVQLLT
Trigger: AGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCCTTGTACCGCAGCCTaGGCAGGTCTGCGACGTCCA +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGPCTAA*AGLRRP
Trigger: TGGACGTCGCAGACCTGCGCAGGCTGCGGTACAAGG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTCCTTGTACCGCAGCCTaGGCAGGTCTGCGACGTCCA +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAPCTAA*AGLRRP
Trigger: TGGACGTCGCAGACCTGCGCAGGCTGCGGTACAAGG...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGAGCCGGGCGGATaGCCTTGTACCGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFQEPGG*PCTAAC
Trigger: GCAGGCTGCGGTACAAGGGCATCCGCCCGGCTCCTG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCACTGCAGGAAGACCCTaGTCCTCTACAAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITTAGRP*SSTRFH
Trigger: GTGGAACCTTGTAGAGGAGCAGGGTCTTCCTGCAGT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CGGAAATTATTGCAGCCAAGGACTACTCCAACTATGTTCTTGCCTATGTCGTGCAGGAACCCTGCTCACTaGTCTTCACGCAAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RKLLQPRTTPTMFLPMSCRNPAH*SSRKVP
Trigger: TGGGACCTTGCGTGAAGAGCAGTGAGCAGGGTTCCT...GCACGACATAGGCAAGAACATAGTTGGAGTAGTCCTTGGCTGCAATAATTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGCCCAGAAAGCATGGCTaGTTGACCACACTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRPRKHG*LTTLGQ
Trigger: TTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGG...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATAACTGCTGGAGCACGTaGTTTCTTCCCGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHNCWST*FLPGYP
Trigger: CGGGTACCCGGGAAGAAAGCACGTGCTCCAGCAGTT...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp AGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGTTTTCTGGCCACTCCTaGAGAGCACATGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: REVSSIHYPHVHARLDCMFSGHS*RAHVHP
Trigger: CGGATGAACATGTGCTCTGCAGGAGTGGCCAGAAAA...CATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGAAACCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAATGCGTACTTCACCGGACCCAGAGCCCCTaGCACAAACCTCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: SFGLLLVCFNKLIKCVLHRTQSP*HKPLNS
Trigger: GGAATTAAGAGGTTTGTGGCAGGGGCTCTGGGTCCG...GTGAAGTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR GCA 90 bp GACCATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCAGAAGTCCTTTGGCCTaGTCTTGGTATGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: DHDAAVVVTIILIGLAQLRSPLA*SWYAST
Trigger: TGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCT...GAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCCTGGTATCTGGGCACTaGTGGCAGCAGCAAGGATGC +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPILVSGH*WQQQGC
Trigger: GCATCCTTGCTGCTGCCAGCAGTGCCCAGATACCAG...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCATTCCCAGGCCTCTTTaGAGCATTGGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITIPRPL*SIGFCW
Trigger: CCAGCAGAACCCAATGCTGCAAAGAGGCCTGGGAAT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGGCAAAGCCAGCTGTGTaGCAACAGTCCCCACAATCC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRAKPAV*QQSPQS
Trigger: GGATTGTGGGGACTGTTGGCACACAGCTGGCTTTGC...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGGCAGGGCTGCCAATATaGTGTCTTCACGGGACGGTA +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRAGLPI*CLHGTV
Trigger: TACCGTCCCGTGAAGACAGCATATTGGCAGCCCTGC...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYTMHFP*QHFNPA
Trigger: AGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGT...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCAGTGGCCAGCACGATaGTGCCCTGGTAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQQWPAR*CPGKGP
Trigger: AGGACCCTTACCAGGGCACCATCGTGCTGGCCACTG...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGACACCACCACACTCTTaGACGCGTCCAGGACATGGA +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRTPPHS*TRPGHG
Trigger: TCCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGTTGGATACTCTGTGCTaGCCAGAACCCAACCACACC +
Preference number: 4 (lower is better)
Translates to: LPFLGRRRTSWKDLHLFWLDTLC*PEPNHT
Trigger: GGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAA...CCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTTTGGATACTCTGTGCTaGCCAGAACCCAACCACACC +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFLDTLC*PEPNHT
Trigger: GGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAA...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp ACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCACATAGAAGGTGGCTATaGGCTCTGCAGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TFAMSGSEAIKLQNLVIAHRRWL*ALQPGA
Trigger: TGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATG...TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGAGTATGGCTCCGTGCTaGCAGAGTCCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRSMAPC*QSPSQP
Trigger: AGGCTGAGAAGGACTCTGCCAGCACGGAGCCATACT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CACCACACTCTTGGACGCGTCCAGGACATGGATTACAGGTGCACTGTATCTCGGAAAAAGACGACTAAGTaGCCTCCTAGATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: HHTLGRVQDMDYRCTVSRKKTTK*PPRFHC
Trigger: ACAGTGGAATCTAGGAGGCCACTTAGTCGTCTTTTT...CCGAGATACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAAATGCCCAGAAAGCATaGCTGCTTGACCACACTGGG +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRNAQKA*LLDHTG
Trigger: CCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATT...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTACCCGGCCAGTCCTTaGTGTCGGCCTAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFYPASP*CRPSSQ
Trigger: CTGGCTGCTAGGCCGACACCAAGGACTGGCCGGGTA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGACTAATGCTATTGACAATGCACTTCCCTTGGCAGCACTTTAACCCAGCTTCAGGTTGCGACAGGTCTTaGAGCGCGGGTGACATGTTG +
Preference number: 4 (lower is better)
Translates to: RLMLLTMHFPWQHFNPASGCDRS*SAGDML
Trigger: CAACATGTCACCCGCGCTCCAAGACCTGTCGCAACC...TGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp AATCCCTCTCCTGTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATCGTCCTCTTAATTCCTGTCTaGAGAGTTACCTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: NPSPVCPERVRPLLSTIVLLIPV*RVTSSA
Trigger: TGCCGAGGAGGTAACTCTCCAGACAGGAATTAAGAG...GACGATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGACAGGAGAGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTCATCCAGAAGTCCTTTaGCCTGCTCTTGGTATGCTT +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCHPEVL*PALGML
Trigger: AAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATG...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACCATCCAGAAGTCCTTTaGCCTGCTCTTGGTATGCTT +
Preference number: 4 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYHPEVL*PALGML
Trigger: AAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATG...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTCCAGCTCTAGGAGGTaGGAACCAACCCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQSSSRR*EPTRQP
Trigger: AGGCTGCCGGGTTGGTTCCCACCTCCTAGAGCTGGA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATGTATGAAATGTGCATaGCGGTGTTACAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVCMKCA*RCYRGK
Trigger: CTTGCCTCTGTAACACCGCCATGCACATTTCATACA...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCATTTCTCCACTCATCAGTCAGTGTTTCCAACAGTaGTGTACAGCACACTGGTTC +
Preference number: 4 (lower is better)
Translates to: HKGILKAFFDRAISPLISQCFQQ*CTAHWF
Trigger: GAACCAGTGTGCTGTACACCACTGTTGGAAACACTG...ACTGATGAGTGGAGAAATGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp TGTTTTTCAATGCCCTTCACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCAGCCCGGAGTTTCTTTTaGCTAATCAGTGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: CFSMPFTRAYSRRSSTGPARSFF*LISVFS
Trigger: GCTGAACACACTGATTAGTCAAAAGAAACTCCGGGC...TGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTGAAGGGCATTGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGGCCTCTGCGTACAGGTaGATGTCGTCTTGGATACTC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRASAYR*MSSWIL
Trigger: GAGTATCCAAGACGACATTCACCTGTACGCAGAGGC...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATGGGAGCGATGAAGTCTaGGAGGCAGTAGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHGSDEV*EAVVWL
Trigger: GAGCCATACTACTGCCTCTCAGACTTCATCGCTCCC...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCGAGTCTCCACATGGTaGGCTTCTCGGTGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGRVSTW*ASRCGR
Trigger: CCGACCACACCGAGAAGCTCACCATGTGGAGACTCG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GTTGCTCCTCCAATCAACAATGGAATCCTTATAGCTAATCTCTCCATTTCCTTGCGAGTCTCCACATGGTaGGCTTCTCGGTGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: VAPPINNGILIANLSISLRVSTW*ASRCGR
Trigger: CCGACCACACCGAGAAGCTCACCATGTGGAGACTCG...CAAGGAAATGGAGAGATTAGCTATAAGGATTCCATTGTTGATTGGAGGAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGATATCAGAGCCCAGCTaGGAACCTGCTCAATCCTGG +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRISEPS*EPAQSW
Trigger: CCAGGATTGAGCAGGTTCTCAGCTGGGCTCTGATAT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTAATGTTACCTTCTCCTaGCTATTGCCACCACCATCT +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCNVTFS*LLPPPS
Trigger: AGATGGTGGTGGCAATAGTCAGGAGAAGGTAACATT...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCCTTCCTGTCCCCACTaGCTTGCCATGTCACCAGGT +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCPSCPH*LAMSPG
Trigger: ACCTGGTGACATGGCAAGTCAGTGGGGACAGGAAGG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AGATATCAACCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAGAGTGGTTCTCCATaGGACACGCTGATGACAAAT +
Preference number: 4 (lower is better)
Translates to: RYQPRHPEVLWPALGMLQQSGSP*DTLMTN
Trigger: ATTTGTCATCAGCGTGTCTCATGGAGAACCACTCTG...TTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR TCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTACCCTCCACCCACTGTaGGAACATGAGAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCTLHPL*EHEKLA
Trigger: GGCCAGCTTCTCATGTTCTCACAGTGGGTGGAGGGT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCAGGGTGCTAGGGCTTTaGTACAGCGCTTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITRVLGL*YSAFFL
Trigger: CAGAAAGAAAGCGCTGTATCAAAGCCCTAGCACCCT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CCAGACAGTAACATATGTCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTAGCACAAAGGTACCTTTaGGATGTCTGGCTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: PDSNICPSKAVAGGTLGLAQRYL*DVWLGS
Trigger: GCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGC...TAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGACATATGTTACTGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR GCA 90 bp CACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCATTTCTCCACTCATCAGTGAAAACCCCATGCATTaGTTCTCGAATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: HKGILKAFFDRAISPLISENPMH*FSNGFH
Trigger: ATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTC...ACTGATGAGTGGAGAAATGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTTGGCCAGCACGATGGTaGCCTGGTAAGGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCWPARW*PGKGPL
Trigger: AAGAGGACCCTTACCAGGGCACCATCGTGCTGGCCA...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGACTCCAACTATGTTCTTaGCTATGTCGTGCACGTCGC +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRLQLCS*LCRARR
Trigger: GCGACGTGCACGACATAGGCAAGAACATAGTTGGAG...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGTACTTGCCCCGGAGCTaGCAGACATCAAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRYLPRS*QTSKKG
Trigger: GCCTTTCTTTGATGTCTGGCAGCTCCGGGGCAAGTA...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCTCGATTCGGGTACTTaGCCCGGAGCTGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCLDSGT*PGAARH
Trigger: ATGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGGTCTTGGATACTCTGTaGTGGCCAGAACCCAACCAC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRVLDTL*WPEPNH
Trigger: GTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGAC...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGGGCACAGCAGCCTCTaGGTACAGGTGAATGTCGTC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCGHSSL*VQVNVV
Trigger: GACGACATTCACCTGTACGCAGAGGCTGCTGTGCCC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCCAGGTAGTCACGGATaGCAGAATGCAAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPPGSHG*QNARER
Trigger: TCGCTCCCTTGCATTCTGGCATCCGTGACTACCTGG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCCTAATGCCTGTAGACTaGTCGATGTCTGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITLMPVD*SMSASL
Trigger: GAGACTCGCAGACATCGAGCAGTCTACAGGCATTAG...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGACTGCAGGAAGACCCTaGTCCTCTACAAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRTAGRP*SSTRFH
Trigger: GTGGAACCTTGTAGAGGAGCAGGGTCTTCCTGCAGT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCAGGAACCCTGCTCACTaGTCTTCACGCAAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPRNPAH*SSRKVP
Trigger: TGGGACCTTGCGTGAAGAGCAGTGAGCAGGGTTCCT...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCATGGGAGGACGAAAATaGCCAGAAAGCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITMGGRK*PESMAA
Trigger: AGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCCAT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTAGTCACCAGGTCATTTTaGAAAGGTCAACATATGCAC +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVVTRSF*KGQHMH
Trigger: GTGCATATGTTGACCTTTGCAAAATGACCTGGTGAC...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGAACTGCTGGAGCACGTaGTTTCTTCCCGGGTACCCG +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQNCWST*FLPGYP
Trigger: CGGGTACCCGGGAAGAAAGCACGTGCTCCAGCAGTT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTTCAGACCTTCGGGTTaGGACAGGTCTTGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQFRPSG*DRSWSA
Trigger: CGCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GGAAATCTTCCCCACAGCAAAATATTTGGACTTCAAATTGGAGAAGTAGAGGCCTTCAGACCTTCGGGTTaGGACAGGTCTTGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: GNLPHSKIFGLQIGEVEAFRPSG*DRSWSA
Trigger: CGCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAA...GGCCTCTACTTCTCCAATTTGAAGTCCAAATATTTTGCTGTGGGGAAGATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CATGGTAAAGGAAAACCCCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGATTTTCTGGCCACTCCTaGAGAGCACATGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: HGKGKPHALLLEWLPFLGFSGHS*RAHVHP
Trigger: CGGATGAACATGTGCTCTGCAGGAGTGGCCAGAAAA...TCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCCTTTACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGATTTTCTGGCCACTCCTaGAGAGCACATGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRFSGHS*RAHVHP
Trigger: CGGATGAACATGTGCTCTGCAGGAGTGGCCAGAAAA...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCGGTGTTGGGAAGACCTaGATTGGGATAACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LGSTLTQLQSQQNWRSRCGVGKT*IGITED
Trigger: GTCCTCTGTTATCCCAATGCAGGTCTTCCCAACACC...GCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACGCAAAATCCTTTAGGTaGTTGGCCATCATAGAAGGC +
Preference number: 4 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYAKSFR*LAIIEG
Trigger: GCCTTCTATGATGGCCAAGCACCTAAAGGATTTTGC...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651455.1
CDS-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTGGCAGCAGCAAGGATaGACCACTCTCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGWQQQG*TTLLPL
Trigger: GAGGGGCAGGAGAGTGGTGCATCCTTGCTGCTGCCA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CACTGCCACAGTAGGCCCACAGTTCTCGGCGAACTCTTTCATGGAGCTCTTCTGTGCAGAAGTTCCTTATaGATATCATCATACACAGGG +
Preference number: 4 (lower is better)
Translates to: HCHSRPTVLGELFHGALLCRSSL*ISSYTG
Trigger: CCCTGTGTATGATGATATCCATAAGGAACTTCTGCA...CAGAAGAGCTCCATGAAAGAGTTCGCCGAGAACTGTGGGCCTACTGTGGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCAGTGGCCAGCACGATaGTGCCCTGGTAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFQWPAR*CPGKGP
Trigger: AGGACCCTTACCAGGGCACCATCGTGCTGGCCACTG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCACGACGCGTCCAGGACATaGATTACAGGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: WQHFNPASITAKLEESMHDASRT*ITGALY
Trigger: ATACAGTGCACCTGTAATCCATGTCCTGGACGCGTC...GTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCACACCACCACACTCTTaGACGCGTCCAGGACATGGA +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPTPPHS*TRPGHG
Trigger: TCCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGT...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTTTTCATCTAACAGCTaGGAACACACCACCACACTC +
Preference number: 4 (lower is better)
Translates to: HDAAVVVTIILIGLAQLFFSSNS*EHTTTL
Trigger: GAGTGTGGTGGTGTGTTCCCAGCTGTTAGATGAAAA...GAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGCCTCAACCTGATCCTTaGAAATCTTCCCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: HALLLEWLPFLGRRRTSWPQPDP*KSSPQQ
Trigger: TTGCTGTGGGGAAGATTTCCAAGGATCAGGTTGAGG...CCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GCAACATTACAGCGCTCTCCAATGTTAACAAAGTTGGTGTACGGTCCAATCCTGCGGCCTTTCCACAGATaGGGACACAGAGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: ATLQRSPMLTKLVYGPILRPFHR*GHRECL
Trigger: AAGACACTCTCTGTGTCCCCATCTGTGGAAAGGCCG...CAGGATTGGACCGTACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CCA 90 bp ACAAATCCCTCTCCTGTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATCCATCCAGAAGTCCTTTaGCCTGCTCTTGGTATGCTT +
Preference number: 4 (lower is better)
Translates to: TNPSPVCPERVRPLLSTIHPEVL*PALGML
Trigger: AAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATG...GATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGACAGGAGAGGGATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CCA 90 bp CCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAACAAGGCTGCCTTaGCATTGGCAGTATCAAAAA +
Preference number: 4 (lower is better)
Translates to: PRHPEVLWPALGMLQQAHQTRLP*HWQYQK
Trigger: TTTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTG...ATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CCA 90 bp AGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGTGGGAAGACCTGCATTaGGATAACAGAGGACATAGG +
Preference number: 4 (lower is better)
Translates to: REVSSIHYPHVHARLDCMWEDLH*DNRGHR
Trigger: CCTATGTCCTCTGTTATCCCAATGCAGGTCTTCCCA...CATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGAAACCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000651455.1
CDS-3UTR CCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAAGCATTGGGTTCTGCTaGCATGCTTCGAAACGCTCT +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRSIGFC*HASKRS
Trigger: AGAGCGTTTCGAAGCATGCCAGCAGAACCCAATGCT...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTCCAGCTCTAGGAGGTaGGAACCAACCCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQASSSRR*EPTRQP
Trigger: AGGCTGCCGGGTTGGTTCCCACCTCCTAGAGCTGGA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGAAGCTTTCCTGACTTaGGTGGAACCGGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPEAFLT*VEPGWG
Trigger: ACCCCACCCCGGTTCCACCCAAGTCAGGAAAGCTTC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGAAGCTTTCCTGACTTaGGTGGAACCGGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCEAFLT*VEPGWG
Trigger: ACCCCACCCCGGTTCCACCCAAGTCAGGAAAGCTTC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGCAGCCTCAAACTCCTaGCCTCAACCGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCAASNS*PQPILP
Trigger: TGGGAGGATCGGTTGAGGCCAGGAGTTTGAGGCTGC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CAAATCCCTCTCCTGTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATCGAAGTTAGCTCCCCACTaGCAGGTTGATGTTCCTATA +
Preference number: 4 (lower is better)
Translates to: QIPLLSVRKESAHFYQRSKLAPH*QVDVPI
Trigger: TATAGGAACATCAACCTGCCAGTGGGGAGCTAACTT...CGATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGACAGGAGAGGGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652435.1
3UTR CAA 72 bp CCTGCAACATTACAGCGCTCTCCAATGTTAACAAAGTaGGTGTACGGTCCAATCCTGAAGGGCTCTAGACCA +
Preference number: 4 (lower is better)
Translates to: PATLQRSPMLTK*VYGPILKGSRP
Trigger: TGGTCTAGAGCCCTTCAGGATTGGACCGTACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR CAA 72 bp ATCAACCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTaGGTATGCTTCAACAAGCTCATCAAATGCGTACTT +
Preference number: 4 (lower is better)
Translates to: INPAIQKSFGLL*VCFNKLIKCVL
Trigger: AAGTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR TCA 90 bp ATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCCGGGTGCACACTCTaGTTTTTGTGTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: IASRMASIPRKEKDKLERPGCTL*FLCLFL
Trigger: CAGAAACAGACACAAAAATCAGAGTGTGCACCCGGG...TCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCCTTGGAAATCTTCCGTGGGCTTCACTGGGTaGGGTTCAGACAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: QICSSSMHNPQPDPWKSSVGFTG*GSDSQS
Trigger: GGATTGGCTGTCTGAACCTCACCCAGTGAAGCCCAC...GGAAGATTTCCAAGGATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GTCGTCCTCTCCTTCCTTCAGACTAATGCTATTGACAATGCACTTCCCTTGGCAGCCCGGAGTTTCTTTTaGCTAATCAGTGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VVLSFLQTNAIDNALPLAARSFF*LISVFS
Trigger: GCTGAACACACTGATTAGTCAAAAGAAACTCCGGGC...TGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCTGAAGGAAGGAGAGGACGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp AGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCACAAAGGTACCTTTGCGATGCCTCTGCGTACAGGTaGATGTCGTCTTGGATACTC +
Preference number: 4 (lower is better)
Translates to: SFNHSKIGGVDAQRYLCDASAYR*MSSWIL
Trigger: GAGTATCCAAGACGACATTCACCTGTACGCAGAGGC...ATCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTGCCTCTGCGTACAGGTaGATGTCGTCTTGGATACTC +
Preference number: 4 (lower is better)
Translates to: ELQKFLMDIIIHREVSSIASAYR*MSSWIL
Trigger: GAGTATCCAAGACGACATTCACCTGTACGCAGAGGC...AATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCGAGTCTCCACATGGTaGGCTTCTCGGTGTGGTCGG +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSRVSTW*ASRCGR
Trigger: CCGACCACACCGAGAAGCTCACCATGTGGAGACTCG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGCTGACAAGCAAGCAGTaGGCGCATGCCTTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWLTSKQ*AHAFCQ
Trigger: TTGGCAAAAGGCATGCGCTCACTGCTTGCTTGTCAG...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCATGTTGACAATATCAGAGCCCAGCTaGGAACCTGCTCAATCCTGG +
Preference number: 4 (lower is better)
Translates to: QNLVIALGPSSMPSSMLTISEPS*EPAQSW
Trigger: CCAGGATTGAGCAGGTTCTCAGCTGGGCTCTGATAT...TGTCAACATGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTATGGTAAGAAATGAGTaGCTTTATGCTGCCCACTTG +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCMVRNE*LYAAHL
Trigger: CAAGTGGGCAGCATAAAGTCACTCATTTCTTACCAT...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGGTAAAGGAATTGAGGCTTGTTGCTTaGGTGGTGGCACCATTCTTC +
Preference number: 4 (lower is better)
Translates to: SSIHYPHVHARLDCMVKELRLVA*VVAPFF
Trigger: GAAGAATGGTGCCACCACTCAAGCAACAAGCCTCAA...TTCCTTTACCATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAAAGGCCCGGGTCTTTTaGCGCCTCCCGTTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSKARVF*RLPLAR
Trigger: GCGAGCCAACGGGAGGCGTCAAAAGACCCGGGCCTT...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AAAATCATTTCATCCAGGGAAGGAGTGATGAGTCCTGACAGGCCAATTATATCTGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KIISSREGVMSPDRPIISVLERG*HVVESP
Trigger: AGGAGACTCGACAACATGTCACCCGCGCTCCAAGAC...AGATATAATTGGCCTGTCAGGACTCATCACTCCTTCCCTGGATGAAATGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp TGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAACAGAGTGGTTCTCCATaGGACACGCTGATGACAAAT +
Preference number: 4 (lower is better)
Translates to: CIASRMASIPRKEKDKLEQSGSP*DTLMTN
Trigger: ATTTGTCATCAGCGTGTCTCATGGAGAACCACTCTG...TTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGACAGAGTGGTTCTCCATaGGACACGCTGATGACAAAT +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRQSGSP*DTLMTN
Trigger: ATTTGTCATCAGCGTGTCTCATGGAGAACCACTCTG...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GTCGTCCTCTCCTTCCTTCAGACTAATGCTATTGACAATGCACTTCCCTTGGCAGCAATTTCCCTGATATaGTCTGGTGTTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: VVLSFLQTNAIDNALPLAAISLI*SGVDPQ
Trigger: CTGTGGGTCAACACCAGATCATATCAGGGAAATTGC...TGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCTGAAGGAAGGAGAGGACGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GGCTCCCATTTCCACCTGCACTTTGGCAACACACAAGGCTTCTTCATAGTTTCCCTTCAGCAATTTCCCTaGTATGATCTGGTGTTGACC +
Preference number: 4 (lower is better)
Translates to: GSHFHLHFGNTQGFFIVSLQQFP*YDLVLT
Trigger: GGTCAACACCAGATCATATCAGGGAAATTGCTGAAG...GGAAACTATGAAGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR TCA 90 bp TGTTTTTCAATGCCCTTCACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCACTTCAGCAATTTCCCTaGTATGATCTGGTGTTGACC +
Preference number: 4 (lower is better)
Translates to: CFSMPFTRAYSRRSSTGPLQQFP*YDLVLT
Trigger: GGTCAACACCAGATCATATCAGGGAAATTGCTGAAG...TGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTGAAGGGCATTGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp ACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCATGTACGGTCCAATCCTaGAGGGCTCTAGACCAGACA +
Preference number: 4 (lower is better)
Translates to: TFAMSGSEAIKLQNLVIACTVQS*RALDQT
Trigger: TGTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACA...TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR TCA 90 bp AGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCTGTACGGTCCAATCCTaGAGGGCTCTAGACCAGACA +
Preference number: 4 (lower is better)
Translates to: SSLWISSYTGRFPAFTIPCTVQS*RALDQT
Trigger: TGTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACA...GGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR TCA 90 bp TATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATGCCATCATCCATGTTaGCATCCAACACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: YGYHHTQGGFQHSLSPCPCHHPC*HPTPGL
Trigger: GAGCCCAGGTGTTGGATGTCAACATGGATGATGGCA...TGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CTCAACCTCAGCCACAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCTGCCATCATCCATGTTaGCATCCAACACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LNLSHRYVLPQCIILNLICHHPC*HPTPGL
Trigger: GAGCCCAGGTGTTGGATGTCAACATGGATGATGGCA...GATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTGTGGCTGAGGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAAAAAAGTGTTATGGTCTaGTGTATCCCCCAAATCATG +
Preference number: 4 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQKSVMV*CIPQIM
Trigger: CATGATTTGGGGGATACATCAGACCATAACACTTTT...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTAGGCAGCAGGAGGATTaGGGCGGGGGTGTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCRQQED*GGGVKN
Trigger: ATTCTTTACACCCCCGCCTCAATCCTCCTGCTGCCT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTGGGCCCCTGCCCTCATaGGGCTTTACAGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFGPLPS*GFTVCS
Trigger: AGAGCAGACTGTAAAGCCTCATGAGGGCAGGGGCCC...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGAGTTCCCTCACCTCTaGTCCCCTAATCCCATTCCG +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCEFPHL*SPNPIP
Trigger: CGGAATGGGATTAGGGGATCAGAGGTGAGGGAACTC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGCTCCAGGCTAAGCAAGAAGAAATaGAACCAGGCTTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: SSEGEGQVGKTSTYSGSRLSKKK*NQACLM
Trigger: CATCAAGCAAGCCTGGTTTCATTTCTTCTTGCTTAG...CCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTGGCCAGCACGATGGTaGCCTGGTAAGGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFWPARW*PGKGPL
Trigger: AAGAGGACCCTTACCAGGGCACCATCGTGCTGGCCA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTGGCCAGCACGATGGTaGCCTGGTAAGGGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAWPARW*PGKGPL
Trigger: AAGAGGACCCTTACCAGGGCACCATCGTGCTGGCCA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ATGCACTTCCCTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGCTCCAACTATGTTCTTaGCTATGTCGTGCACGTCGC +
Preference number: 4 (lower is better)
Translates to: MHFPWQHFNPASITAKLELQLCS*LCRARR
Trigger: GCGACGTGCACGACATAGGCAAGAACATAGTTGGAG...CTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCTCGATTCGGGTACTTaGCCCGGAGCTGCCAGACAT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFLDSGT*PGAARH
Trigger: ATGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATGTCTTGGATACTCTGTaGTGGCCAGAACCCAACCAC +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHVLDTL*WPEPNH
Trigger: GTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGAC...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCAGTCTTGGATACTCTGTaGTGGCCAGAACCCAACCAC +
Preference number: 4 (lower is better)
Translates to: YGYHHTQGGFQHSLSPCPVLDTL*WPEPNH
Trigger: GTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGAC...TGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GCAACATTACAGCGCTCTCCAATGTTAACAAAGTTGGTGTACGGTCCAATCCTGTCACGGATGCCAGAATaGAAGGGAGCGATGAAGTCT +
Preference number: 4 (lower is better)
Translates to: ATLQRSPMLTKLVYGPILSRMPE*KGAMKS
Trigger: AGACTTCATCGCTCCCTTGCATTCTGGCATCCGTGA...CAGGATTGGACCGTACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCACCAGGTAGTCACGGATaGCAGAATGCAAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPPGSHG*QNARER
Trigger: TCGCTCCCTTGCATTCTGGCATCCGTGACTACCTGG...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGCCTGCGCAGGTCTaGGACGTCCAGCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFQPAQV*DVQLLT
Trigger: AGTGAGCAGCTGGACGTCGCAGACCTGCGCAGGCTG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGCTAATGCCTGTAGACTaGTCGATGTCTGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRLMPVD*SMSASL
Trigger: GAGACTCGCAGACATCGAGCAGTCTACAGGCATTAG...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GTGGCAGGTGGAACTCTAGGCTTACAATTTTTCACAGCTTCAGCAATTTCCCTGCTAATGCCTGTAGACTaGTCGATGTCTGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VAGGTLGLQFFTASAISLLMPVD*SMSASL
Trigger: GAGACTCGCAGACATCGAGCAGTCTACAGGCATTAG...CAGGGAAATTGCTGAAGCTGTGAAAAATTGTAAGCCTAGAGTTCCACCTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp AGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCACTGCAGGAAGACCCTaGTCCTCTACAAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: SSLWISSYTGRFPAFTIPTAGRP*SSTRFH
Trigger: GTGGAACCTTGTAGAGGAGCAGGGTCTTCCTGCAGT...GGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCLFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGAGGAACCCTGCTCACTaGTCTTCACGCAAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQRNPAH*SSRKVP
Trigger: TGGGACCTTGCGTGAAGAGCAGTGAGCAGGGTTCCT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GGCATCATCGTAGACCTTCCTGGCCTCTCCACCTACTGTTTTGTCGTTAAATATTGCCAAAGGGAGTTCTaGAGCCATTTAGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GIIVDLPGLSTYCFVVKYCQREF*SHLVQP
Trigger: AGGCTGGACTAAATGGCTGCAGAACTCCCTTTGGCA...ATATTTAACGACAAAACAGTAGGTGGAGAGGCCAGGAAGGTCTACGATGATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGCAAGCAGTGAGCGCATaGCTTTTGCCAAAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRQAVSA*LLPKGV
Trigger: AACTCCCTTTGGCAAAAGGCATGCGCTCACTGCTTG...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCCAGAAAGCATGGCTaGTTGACCACACTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQPRKHG*LTTLGQ
Trigger: TTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGG...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCGAGTTTGAGGCTTGTTaGTTGAGTGGTGGCACCATT +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITEFEAC*LSGGTI
Trigger: AATGGTGCCACCACTCAAGCAACAAGCCTCAAACTC...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GCAGTATCAAAAATAGTTTCAATGAGTAAGATATCAACCCCGCCATCCAGAAGTGCTGGGCGCGGCAACTaGTGGAGCACGTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: AVSKIVSMSKISTPPSRSAGRGN*WSTCFL
Trigger: AAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCCAGC...ACTTCTGGATGGCGGGGTTGATATCTTACTCATTGAAACTATTTTTGATACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR GCA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACTTAAAATGTCATTGTTaGCTTTCAGCGGCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYLKCHC*LSAAWH
Trigger: ATGCCAGGCCGCTGAAAGGCAACAATGACATTTTAA...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCGGACCCAGAGCCCCTaGCACAAACCTCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCRTQSP*HKPLNS
Trigger: GGAATTAAGAGGTTTGTGGCAGGGGCTCTGGGTCCG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCGGACCCAGAGCCCCTaGCACAAACCTCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQRTQSP*HKPLNS
Trigger: GGAATTAAGAGGTTTGTGGCAGGGGCTCTGGGTCCG...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCGGCCTGCTCTTGGTATaGTTCAACAAGCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: FSNGFHSSEGEGQVGKTSGLLLV*FNKLIK
Trigger: TTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCC...GGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAGGCCTGCTCTTGGTATaGTTCAACAAGCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: RHPEVLWPALGMLQQAHQGLLLV*FNKLIK
Trigger: TTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCC...TTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR GCA 90 bp AGAGTCCGCCCACTTTTATCAACGATCGTCCCTGAAATAAAGATAGGCCGGGGAAGAAGTCCTTTGGCCTaGTCTTGGTATGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: RVRPLLSTIVPEIKIGRGRSPLA*SWYAST
Trigger: TGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCT...TCCCCGGCCTATCTTTATTTCAGGGACGATCGTTGATAAAAGTGGGCGGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR GCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTACACAATTTAATCCAATaGAGAGTGGTTCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVHNLIQ*RVVLHE
Trigger: CTCATGGAGAACCACTCTGCATTGGATTAAATTGTG...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTGGCAGCAGCAAGGATaGACCACTCTCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSWQQQG*TTLLPL
Trigger: GAGGGGCAGGAGAGTGGTGCATCCTTGCTGCTGCCA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCTGGTATCTGGGCACTaGTGGCAGCAGCAAGGATGC +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFLVSGH*WQQQGC
Trigger: GCATCCTTGCTGCTGCCAGCAGTGCCCAGATACCAG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGATGGGTTCTGCTGGCATaGTTCGAAACGCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRWVLLA*FETLFI
Trigger: AATGAAGAGCGTTTCGAAGCATGCCAGCAGAACCCA...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGAGGCATGTGACACTGTaGCCAGCTCTTCTTGACGTT +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRRHVTL*PALLDV
Trigger: AACGTCAAGAAGAGCTGGGCACAGTGTCACATGCCT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCCAGCACAGGCTGGAGTaGAGCTGTGCAATCATAGCT +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIQHRLE*SCAIIA
Trigger: AGCTATGATTGCACAGCTGCACTCCAGCCTGTGCTG...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATCAGCACAGGCTGGAGTaGAGCTGTGCAATCATAGCT +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHQHRLE*SCAIIA
Trigger: AGCTATGATTGCACAGCTGCACTCCAGCCTGTGCTG...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATTCCTTCCTCACCTGCTaGAAGTTCACACTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHSFLTC*KFTLSR
Trigger: CCTGCTGAGTGTGAACTTGCAGCAGGTGAGGAAGGA...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TTGACATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTGGCAACACACAAGCAATCACAGCAAAATTaGAGGAGTCGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: LTSNTWAPISTCTLATHKQSQQN*RSRCTK
Trigger: CTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTG...CTTGTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITTMHFP*QHFNPA
Trigger: AGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: CIASRMASIPRKEKDKLETMHFP*QHFNPA
Trigger: AGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGT...TTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTGTAAGAGCTTCTCAGTaGCCTCAGGGTCTTTATTCC +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFVRASQ*PQGLYS
Trigger: GGAATAAAGACCCTGAGGCCACTGAGAAGCTCTTAC...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGTTCAGATGTGGGTTTTTGAAGTaGTTGCTCCTCCAATCAACA +
Preference number: 4 (lower is better)
Translates to: VFKDLGPNKRGLHWVRFRCGFLK*LLLQST
Trigger: TGTTGATTGGAGGAGCAACCACTTCAAAAACCCACA...TCTGAACCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGATTTTAACTGCTGTGTaGGTTTTTGAAGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMILTAV*VFEVVA
Trigger: AGCAACCACTTCAAAAACCCACACAGCAGTTAAAAT...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGACACCACCACACTCTTaGACGCGTCCAGGACATGGA +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQTPPHS*TRPGHG
Trigger: TCCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGAAACGTGGGCTTCACTaGGTGAGGTTCAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWKRGLH*VRFRQP
Trigger: TGGCTGTCTGAACCTCACCCAGTGAAGCCCACGTTT...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAATGGGCTCTGCAGCCTaGGGCACAGCAGCCTCTGCG +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSMGSAA*GTAASA
Trigger: CGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCAT...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTCATAGAAGGTGGCTATaGGCTCTGCAGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAHRRWL*ALQPGA
Trigger: TGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATG...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCCTTGGAAATCTTCCCATAGAAGGTGGCTATaGGCTCTGCAGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: QICSSSMHNPQPDPWKSSHRRWL*ALQPGA
Trigger: TGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATG...GGAAGATTTCCAAGGATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GGAAATCTTCCCCACAGCAAAATATTTGGACTTCAAATTGGAGAAGTAGAGGCCAGTATGGCTCCGTGCTaGCAGAGTCCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GNLPHSKIFGLQIGEVEASMAPC*QSPSQP
Trigger: AGGCTGAGAAGGACTCTGCCAGCACGGAGCCATACT...GGCCTCTACTTCTCCAATTTGAAGTCCAAATATTTTGCTGTGGGGAAGATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTATCATATCCCAAAATaGGTCCAAGCCATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMYHIPK*VQAISQ
Trigger: TTGAGAAATGGCTTGGACCCATTTTGGGATATGATA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CACTGCCACAGTAGGCCCACAGTTCTCGGCGAACTCTTTCATGGAGCTCTTCTGTATCATATCCCAAAATaGGTCCAAGCCATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: HCHSRPTVLGELFHGALLYHIPK*VQAISQ
Trigger: TTGAGAAATGGCTTGGACCCATTTTGGGATATGATA...CAGAAGAGCTCCATGAAAGAGTTCGCCGAGAACTGTGGGCCTACTGTGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCATTTCTCCACTCATCAGTAAAAAGACGACTAAGTaGCCTCCTAGATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: HKGILKAFFDRAISPLISKKTTK*PPRFHC
Trigger: ACAGTGGAATCTAGGAGGCCACTTAGTCGTCTTTTT...ACTGATGAGTGGAGAAATGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATAATGCCCAGAAAGCATaGCTGCTTGACCACACTGGG +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHNAQKA*LLDHTG
Trigger: CCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATT...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTGGGAGGCTGAGGTaGGCAGATCACGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSFGRLR*ADHEVG
Trigger: CCCGACCTCGTGATCTGCCCACCTCAGCCTCCCAAA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATTTAGCTTCTCCCGCTaGATCATGGTCCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: YGYHHTQGGFQHSLSPCPFSFSR*IMVPIP
Trigger: AGGGATGGGGACCATGATCCAGCGGGAGAAGCTAAA...TGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCCTCTTAATTCCTGTCTaGAGAGTTACCTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITLLIPV*RVTSSA
Trigger: TGCCGAGGAGGTAACTCTCCAGACAGGAATTAAGAG...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCATTTCTCCACTCATCAGTCAAACAAGGCTGCCTTaGCATTGGCAGTATCAAAAA +
Preference number: 4 (lower is better)
Translates to: HKGILKAFFDRAISPLISQTRLP*HWQYQK
Trigger: TTTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTG...ACTGATGAGTGGAGAAATGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCAGTCACCAAAGGTGTTaGGAAGACCTGCATTGGGAT +
Preference number: 4 (lower is better)
Translates to: LGSTLTQLQSQQNWRSRCSHQRC*EDLHWD
Trigger: ATCCCAATGCAGGTCTTCCCAACACCTTTGGTGACT...GCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTTCATTCCCCAAAGCCTaGTATCTGGGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCSFPKA*YLGTAG
Trigger: GCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGA...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGCAAATCATGTTGAAATaGAATCCCCAGAATGATGGT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMQIMLK*NPQNDG
Trigger: ACCATCATTCTGGGGATTCCATTTCAACATGATTTG...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTGGGTGGAACCGGGGTaGGGTTATTCCAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGWVEPG*GYSRQR
Trigger: CCTCTGTCTGGAATAACCCCACCCCGGTTCCACCCA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATGCCGAGTTTCTCTCTaGGAAATGAAGAAACAAGAT +
Preference number: 4 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVCRVSL*EMKKQD
Trigger: ATCTTGTTTCTTCATTTCCCAGAGAGAAACTCGGCA...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp ACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCACCCGGGTGCACACTCTaGTTTTTGTGTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TFAMSGSEAIKLQNLVIAPGCTL*FLCLFL
Trigger: CAGAAACAGACACAAAAATCAGAGTGTGCACCCGGG...TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGCTCCACTCATCAGTCTaGATGACTTTCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRLHSSV*MTFFPP
Trigger: AGGAGGGAAGAAAGTCATTCAGACTGATGAGTGGAG...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGAGGAGTGATGAGTCCTaGCAGGCCAATTATATCTGC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRRSDES*QANYIC
Trigger: GCAGATATAATTGGCCTGTCAGGACTCATCACTCCT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGCCTCTGCGTACAGGTaGATGTCGTCTTGGATACTC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCASAYR*MSSWIL
Trigger: GAGTATCCAAGACGACATTCACCTGTACGCAGAGGC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CATGGTAAAGGAAAACCCCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGACAGGTTGACTTGCTTTaGAATCAAACGACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HGKGKPHALLLEWLPFLGQVDLL*NQTTSV
Trigger: GACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTG...TCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCCTTTACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTTGGCTTCAGTGTTTCTaGCAAGCAAGCAGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCWLQCF*QASSER
Trigger: GCGCTCACTGCTTGCTTGTCAGAAACACTGAAGCCA...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GACCATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCCATCTTGAAGTAGGATaGGTGTATATTTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: DHDAAVVVTIILIGLAQLHLEVG*VYILHA
Trigger: TGCATGCAAAATATACACTCATCCTACTTCAAGATG...GAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp CATGGTAAAGGAAAACCCCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAATGTTACCTTCTCCTaGCTATTGCCACCACCATCT +
Preference number: 4 (lower is better)
Translates to: HGKGKPHALLLEWLPFLGNVTFS*LLPPPS
Trigger: AGATGGTGGTGGCAATAGTCAGGAGAAGGTAACATT...TCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCCTTTACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTCAACATATGCACGGGTaGGTTTCTAGGCCCTTATTT +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFQHMHG*VSRPLF
Trigger: AAATAAGGGCCTAGAAACTCACCCGTGCATATGTTG...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp ACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCATCTGCAGAATGGCATTaGTCTCATCCCGCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: TFAMSGSEAIKLQNLVIASAEWH*SHPAGF
Trigger: AAACCCTGCGGGATGAGATCAATGCCATTCTGCAGA...TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GGCTCCCATTTCCACCTGCACTTTGGCAACACACAAGGCTTCTTCATAGTTTCCAAGTATTTGTTTCAATaGTATCTGCCCCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSHFHLHFGNTQGFFIVSKYLFQ*YLPQPA
Trigger: TGCTGGCTGGGGCAGATATCATTGAAACAAATACTT...GGAAACTATGAAGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR TCA 90 bp GACAAATCCCTCTCCTGTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATAAGTATTTGTTTCAATaGTATCTGCCCCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: DKSLSCLSGKSPPTFINDKYLFQ*YLPQPA
Trigger: TGCTGGCTGGGGCAGATATCATTGAAACAAATACTT...ATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGACAGGAGAGGGATTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR TCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTCAAGCTCATCAAATGTaGTGTTCCTATAATCCGGCC +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFQAHQM*CSYNPA
Trigger: GGCCGGATTATAGGAACATCACATTTGATGAGCTTG...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GAGTCGATGCACAAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAGCTCATCAAATGTaGTGTTCCTATAATCCGGCC +
Preference number: 4 (lower is better)
Translates to: ESMHKGTFAMSGSEAIKLQAHQM*CSYNPA
Trigger: GGCCGGATTATAGGAACATCACATTTGATGAGCTTG...CAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCATCGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp TGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATGATATGATCTGGTGTTaGCCCACAGCATCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: CLARKQLSCKIWSLHLDHDMIWC*PTASSN
Trigger: GTTGGAGGATGCTGTGGGTCAACACCAGATCATATC...ATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGCCATGATGGCACCATaGTCTTGGACTTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCAMMAP*SWTSRL
Trigger: GAGTCTGGAAGTCCAAGATCATGGTGCCATCATGGC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGTCAGCAAGGGCTGTATaGAATGTGCATGGCGGTGTT +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWSARAV*NVHGGV
Trigger: AACACCGCCATGCACATTTCATACAGCCCTTGCTGA...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTAGGCTCTGGGTATCCTaGGCTCAGGAAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFRLWVS*AQEEAG
Trigger: CCCTGCCTCTTCCTGAGCTCAGGATACCCAGAGCCT...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGCACAAAGGTACCTTTaGGATGTCTGGCTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPAQRYL*DVWLGS
Trigger: GCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTGAAAACCCCATGCATTaGTTCTCGAATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFENPMH*FSNGFH
Trigger: ATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTC...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CCAATGTTAACAAAGTTGGTGTACGGTCCAATCCTGAAGGGCTCTAGACCAGACCATGCCAGACTTGATTaGATGGTAAAGGAAAACCCC +
Preference number: 4 (lower is better)
Translates to: PMLTKLVYGPILKGSRPDHARLD*MVKENP
Trigger: GGGGTTTTCCTTTACCATGCAATCAAGTCTGGCATG...GTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACACCAACTTTGTTAACATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR GCA 90 bp ATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGATTCTTGCCTATGTCGTaGACGTCGCCTTTAACAGTG +
Preference number: 4 (lower is better)
Translates to: IASRMASIPRKEKDKLERFLPMS*TSPLTV
Trigger: CACTGTTAAAGGCGACGTGCACGACATAGGCAAGAA...TCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCCTCCAACTATGTTCTTaGCTATGTCGTGCACGTCGC +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPILQLCS*LCRARR
Trigger: GCGACGTGCACGACATAGGCAAGAACATAGTTGGAG...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCGACATGGATTACAGGTaGACTGTATCTCGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITDMDYR*TVSRSY
Trigger: ATAGCTCCGAGATACAGTGCACCTGTAATCCATGTC...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGTCACGGATGCCAGAATaGAAGGGAGCGATGAAGTCT +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWSRMPE*KGAMKS
Trigger: AGACTTCATCGCTCCCTTGCATTCTGGCATCCGTGA...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp ACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCATCACGGATGCCAGAATaGAAGGGAGCGATGAAGTCT +
Preference number: 4 (lower is better)
Translates to: TFAMSGSEAIKLQNLVIASRMPE*KGAMKS
Trigger: AGACTTCATCGCTCCCTTGCATTCTGGCATCCGTGA...TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCTCACGGATGCCAGAATaGAAGGGAGCGATGAAGTCT +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPSRMPE*KGAMKS
Trigger: AGACTTCATCGCTCCCTTGCATTCTGGCATCCGTGA...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCCAGGTAGTCACGGATaGCAGAATGCAAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFPGSHG*QNARER
Trigger: TCGCTCCCTTGCATTCTGGCATCCGTGACTACCTGG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCGTCCAGCTGCTCACTaGCACAGTAGGCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSRPAAH*HSRPTV
Trigger: AACTGTGGGCCTACTGTGGCAGTGAGCAGCTGGACG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCAAGACTGCTCGATGTCTaGGAGTCTCCACATGGTGAG +
Preference number: 4 (lower is better)
Translates to: LSCKIWSLHLDHLACHHPRLLDV*ESPHGE
Trigger: CTCACCATGTGGAGACTCGCAGACATCGAGCAGTCT...TGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTAGACTGCTCGATGTCTaGGAGTCTCCACATGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCRLLDV*ESPHGE
Trigger: CTCACCATGTGGAGACTCGCAGACATCGAGCAGTCT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAACTGCAGGAAGACCCTaGTCCTCTACAAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPTAGRP*SSTRFH
Trigger: GTGGAACCTTGTAGAGGAGCAGGGTCTTCCTGCAGT...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCTGTTTTCCAGGCACTaGAGGAAGACCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGLFSRH*RKTLLL
Trigger: GAGGAGCAGGGTCTTCCTGCAGTGCCTGGAAAACAG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTAGGAACCCTGCTCACTaGTCTTCACGCAAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQARNPAH*SSRKVP
Trigger: TGGGACCTTGCGTGAAGAGCAGTGAGCAGGGTTCCT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATATGGGAGGACGAAAATaGCCAGAAAGCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: MDIIIHREVSSIHYPHVHMGGRK*PESMAA
Trigger: AGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCCAT...ATGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCCACATGCAAGAGTTTaGTGGACATACAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPPHARV*WTYRWE
Trigger: CTCCCACCTGTATGTCCAGCAAACTCTTGCATGTGG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTTCAGACCTTCGGGTTaGGACAGGTCTTGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFFRPSG*DRSWSA
Trigger: CGCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGTGTTTCAATGATATCTaGCCCAGCCAGCAAGTATTC +
Preference number: 4 (lower is better)
Translates to: REVSSIHYPHVHARLDCMCFNDI*PSQQVF
Trigger: GAATACTTGCTGGCTGGGGCAGATATCATTGAAACA...CATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGAAACCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TGTTTTTCAATGCCCTTCACAAGGGCATACTCAAGGCGTTCTTCGACAGGGCCATGTTTCAATGATATCTaGCCCAGCCAGCAAGTATTC +
Preference number: 4 (lower is better)
Translates to: CFSMPFTRAYSRRSSTGPCFNDI*PSQQVF
Trigger: GAATACTTGCTGGCTGGGGCAGATATCATTGAAACA...TGGCCCTGTCGAAGAACGCCTTGAGTATGCCCTTGTGAAGGGCATTGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAAGAAGTCCTTTGGCCTaGTCTTGGTATGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRRSPLA*SWYAST
Trigger: TGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCT...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCAGAAGTCCTTTGGCCTaGTCTTGGTATGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LGSTLTQLQSQQNWRSRCRSPLA*SWYAST
Trigger: TGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCT...GCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TCCATGTTGACATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTGGCAACACACAATTTAATCCAATaGAGAGTGGTTCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: SMLTSNTWAPISTCTLATHNLIQ*RVVLHE
Trigger: CTCATGGAGAACCACTCTGCATTGGATTAAATTGTG...TGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAACATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463959.1
CDS-3UTR GCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTCACAATTTAATCCAATaGAGAGTGGTTCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCHNLIQ*RVVLHE
Trigger: CTCATGGAGAACCACTCTGCATTGGATTAAATTGTG...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGATGATCCCATCGCACTaGAGCCTGACCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGMIPSH*SLTSIS
Trigger: GGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCAT...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCATGCAGCATTGGGTTCTaGTGGCATGCTTCGAAACGC +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPCSIGF*WHASKR
Trigger: GCGTTTCGAAGCATGCCAGCAGAACCCAATGCTGCA...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCAGTTCCTTCCTCACCTaGTGCAAGTTCACACTCAGC +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPISSFLT*CKFTLS
Trigger: GCTGAGTGTGAACTTGCAGCAGGTGAGGAAGGAACT...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAGGAGAAGGACAAGTTaGAAAGACCTCCACTTATTC +
Preference number: 4 (lower is better)
Translates to: HALLLEWLPFLGRRRTSWRRRTS*KDLHLF
Trigger: GAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCT...CCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGGCATTGCTTCTCGAATaGCTTCCATTCCTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWALLLE*LPFLGR
Trigger: CCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGC...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp ACAAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGGCATTGCTTCTCGAATaGCTTCCATTCCTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: TKVPLRCLARKQLSCKIWALLLE*LPFLGR
Trigger: CCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGC...CCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGGTAAAGGAAGTAAGAGCTTCTCAGTaGCCTCAGGGTCTTTATTCC +
Preference number: 4 (lower is better)
Translates to: SSIHYPHVHARLDCMVKEVRASQ*PQGLYS
Trigger: GGAATAAAGACCCTGAGGCCACTGAGAAGCTCTTAC...TTCCTTTACCATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGTGGCCAGCACGATaGTGCCCTGGTAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFQWPAR*CPGKGP
Trigger: AGGACCCTTACCAGGGCACCATCGTGCTGGCCACTG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCGACGCGTCCAGGACATaGATTACAGGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPDASRT*ITGALY
Trigger: ATACAGTGCACCTGTAATCCATGTCCTGGACGCGTC...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCACAAAGGTACCTTTGCGATGACGCGTCCAGGACATaGATTACAGGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: SFNHSKIGGVDAQRYLCDDASRT*ITGALY
Trigger: ATACAGTGCACCTGTAATCCATGTCCTGGACGCGTC...ATCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTAAACGTGGGCTTCACTaGGTGAGGTTCAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCKRGLH*VRFRQP
Trigger: TGGCTGTCTGAACCTCACCCAGTGAAGCCCACGTTT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGAAACGTGGGCTTCACTaGGTGAGGTTCAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQKRGLH*VRFRQP
Trigger: TGGCTGTCTGAACCTCACCCAGTGAAGCCCACGTTT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCATGTTGACACATCGTAGACCTTCCTaGCCTCTCCACCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: QNLVIALGPSSMPSSMLTHRRPS*PLHLLF
Trigger: AAACAGTAGGTGGAGAGGCCAGGAAGGTCTACGATG...TGTCAACATGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp ATGCACTTCCCTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGCCTCAACCTGATCCTTaGAAATCTTCCCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: MHFPWQHFNPASITAKLEPQPDP*KSSPQQ
Trigger: TTGCTGTGGGGAAGATTTCCAAGGATCAGGTTGAGG...CTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAAATGCCCAGAAAGCATaGCTGCTTGACCACACTGGG +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPNAQKA*LLDHTG
Trigger: CCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATT...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTTTGGGAGGCTGAGGTaGGCAGATCACGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFFGRLR*ADHEVG
Trigger: CCCGACCTCGTGATCTGCCCACCTCAGCCTCCCAAA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGAAGAAAAAGATGACATaGTTGAGTTTGAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMKKKMT*LSLRLV
Trigger: AACAAGCCTCAAACTCAACCATGTCATCTTTTTCTT...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTCTCCCGCTGGATCATaGTCCCCATCCCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSSPAGS*SPSLHP
Trigger: TGGATGGAGGGATGGGGACCATGATCCAGCGGGAGA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCACGGCCTTTCCACAGATaGGGACACAGAGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPRPFHR*GHRECL
Trigger: AAGACACTCTCTGTGTCCCCATCTGTGGAAAGGCCG...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AAAATAGTTTCAATGAGTAAGATATCAACCCCGCCATCCAGAAGTCCTTTGGCCCGGCCTTTCCACAGATaGGGACACAGAGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KIVSMSKISTPPSRSPLARPFHR*GHRECL
Trigger: AAGACACTCTCTGTGTCCCCATCTGTGGAAAGGCCG...GGCCAAAGGACTTCTGGATGGCGGGGTTGATATCTTACTCATTGAAACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CCA 90 bp ATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTTTGGCCTGCTCTTaGTATGCTTCAACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: IASRMASIPRKEKDKLERPLACS*YASTSS
Trigger: TGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGG...TCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAATGCGTACTTCACCCTTTGGCCTGCTCTTaGTATGCTTCAACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SFGLLLVCFNKLIKCVLHPLACS*YASTSS
Trigger: TGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGG...GTGAAGTACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGTGGGAAGACCTGCATTaGGATAACAGAGGACATAGG +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRWEDLH*DNRGHR
Trigger: CCTATGTCCTCTGTTATCCCAATGCAGGTCTTCCCA...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GGCATCATCGTAGACCTTCCTGGCCTCTCCACCTACTGTTTTGTCGTTAAATATAGTCACCAAAGGTGTTaGGAAGACCTGCATTGGGAT +
Preference number: 4 (lower is better)
Translates to: GIIVDLPGLSTYCFVVKYSHQRC*EDLHWD
Trigger: ATCCCAATGCAGGTCTTCCCAACACCTTTGGTGACT...ATATTTAACGACAAAACAGTAGGTGGAGAGGCCAGGAAGGTCTACGATGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651455.1
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTCATTCCCCAAAGCCTaGTATCTGGGCACTGCTGGC +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFSFPKA*YLGTAG
Trigger: GCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGCCTCTTTGCAGCATTaGGTTCTGCTGGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCASLQH*VLLACF
Trigger: GAAGCATGCCAGCAGAACCCAATGCTGCAAAGAGGC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CCTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGTCCACAGCATTTAATTaGCAGAGACAGACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PWQHFNPASITAKLEESMSTAFN*QRQTRA
Trigger: AGCTCTGGTCTGTCTCTGCCAATTAAATGCTGTGGA...CATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR CAA 72 bp GGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTaGCAAAATCTGGTCATTGCACTTGGACCATCTAGC +
Preference number: 4 (lower is better)
Translates to: GTFAMSGSEAIK*QNLVIALGPSS
Trigger: GCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR CAA 72 bp TGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATaGGAGGAGTCGATGCACAAAGGTACCTTTGCGATG +
Preference number: 4 (lower is better)
Translates to: WQHFNPASITAK*EESMHKGTFAM
Trigger: CATCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR CAA 72 bp AAATTATTGCAGCCAAGGACTACTCCAACTATGTTCTaGCCTATGTCGTGCACGTCGCCTTTAACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: KLLQPRTTPTMF*PMSCTSPLTVA
Trigger: GGCCACTGTTAAAGGCGACGTGCACGACATAGGCAAGAACATAGTTGGAGTAGTCCTTGGCTGCAATAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp AGACTAATGCTATTGACAATGCACTTCCCTTGGCAGCACTTTAACCCAGCTTCACTCCACTCATCAGTCTaGATGACTTTCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RLMLLTMHFPWQHFNPASLHSSV*MTFFPP
Trigger: AGGAGGGAAGAAAGTCATTCAGACTGATGAGTGGAG...TGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCAGGAGTGATGAGTCCTaGCAGGCCAATTATATCTGC +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPRSDES*QANYIC
Trigger: GCAGATATAATTGGCCTGTCAGGACTCATCACTCCT...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CCAGACAGTAACATATGTCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTAAGTATCTCCTCTCCTTaGGAGACTCATAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: PDSNICPSKAVAGGTLGLSISSP*ETHNGP
Trigger: AGGACCATTATGAGTCTCTCAAGGAGAGGAGATACT...TAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGACATATGTTACTGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGAGTATCTCCTCTCCTTaGGAGACTCATAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRSISSP*ETHNGP
Trigger: AGGACCATTATGAGTCTCTCAAGGAGAGGAGATACT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAACCACTTTTTCTGGCTTaGCTTAAGGGTAAGTATCTC +
Preference number: 4 (lower is better)
Translates to: CIASRMASIPRKEKDKLEPLFLA*LKGKYL
Trigger: GAGATACTTACCCTTAAGTCAAGCCAGAAAAAGTGG...TTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTGTGGGCTTCACTGGGTaGGGTTCAGACAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFVGFTG*GSDSQS
Trigger: GGATTGGCTGTCTGAACCTCACCCAGTGAAGCCCAC...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCGCCCGGAGTTTCTTTTaGCTAATCAGTGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPARSFF*LISVFS
Trigger: GCTGAACACACTGATTAGTCAAAAGAAACTCCGGGC...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGCAGGTTGACTTGCTTTaGAATCAAACGACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRQVDLL*NQTTSV
Trigger: GACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTG...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AGTAACATATGTCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTACAATTTTGGCTTCAGTGTTTCTaGCAAGCAAGCAGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: SNICPSKAVAGGTLGLQFWLQCF*QASSER
Trigger: GCGCTCACTGCTTGCTTGTCAGAAACACTGAAGCCA...AAATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGACATATGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAAGGGGTACGGAAATATaGAATTATGGGAGGACGAAA +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRRGTEI*NYGRTK
Trigger: TTTCGTCCTCCCATAATTTCATATTTCCGTACCCCT...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCGTGACATCCGGCTCTaGGCCCCGCAGACATTTAGA +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFRDIRL*APQTFR
Trigger: TCTAAATGTCTGCGGGGCTCAGAGCCGGATGTCACG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFVLERG*HVVESP
Trigger: AGGAGACTCGACAACATGTCACCCGCGCTCCAAGAC...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCATCTGCAGAATGGCATTaGTCTCATCCCGCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPSAEWH*SHPAGF
Trigger: AAACCCTGCGGGATGAGATCAATGCCATTCTGCAGA...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTCTGCAGAATGGCATTaGTCTCATCCCGCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQSAEWH*SHPAGF
Trigger: AAACCCTGCGGGATGAGATCAATGCCATTCTGCAGA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATGGATTTGGTAAATaGCATCAGGCTGAGTTATAC +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCYGFGK*HQAELY
Trigger: GTATAACTCAGCCTGATGTCATTTACCAAATCCATA...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000650888.1
CDS-3UTR TCA 90 bp AAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCCAGAGTGGTTCTCCATaGGACACGCTGATGACAAAT +
Preference number: 4 (lower is better)
Translates to: KGTFAMSGSEAIKLQNLVQSGSP*DTLMTN
Trigger: ATTTGTCATCAGCGTGTCTCATGGAGAACCACTCTG...GACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATATGATCTGGTGTTaGCCCACAGCATCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPDMIWC*PTASSN
Trigger: GTTGGAGGATGCTGTGGGTCAACACCAGATCATATC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp ACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCAGCAATTTCCCTGATATaGTCTGGTGTTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: TFAMSGSEAIKLQNLVIAAISLI*SGVDPQ
Trigger: CTGTGGGTCAACACCAGATCATATCAGGGAAATTGC...TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp ATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATGCAATTTCCCTGATATaGTCTGGTGTTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: MDIIIHREVSSIHYPHVHAISLI*SGVDPQ
Trigger: CTGTGGGTCAACACCAGATCATATCAGGGAAATTGC...ATGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGGCAATTTCCCTGATATaGTCTGGTGTTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWAISLI*SGVDPQ
Trigger: CTGTGGGTCAACACCAGATCATATCAGGGAAATTGC...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTGCCATCATCCATGTTaGCATCCAACACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQACHHPC*HPTPGL
Trigger: GAGCCCAGGTGTTGGATGTCAACATGGATGATGGCA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGGCCATGATGGCACCATaGTCTTGGACTTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGAMMAP*SWTSRL
Trigger: GAGTCTGGAAGTCCAAGATCATGGTGCCATCATGGC...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGTCCCCCAAATCATGTTaGAATGGAATCCCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRSPKSC*NGIPRM
Trigger: CATTCTGGGGATTCCATTTCAACATGATTTGGGGGA...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAAGGGTGCTAGGGCTTTaGTACAGCGCTTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPRVLGL*YSAFFL
Trigger: CAGAAAGAAAGCGCTGTATCAAAGCCCTAGCACCCT...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCGCACAAAGGTACCTTTaGGATGTCTGGCTCGGAAGC +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFAQRYL*DVWLGS
Trigger: GCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGC...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGAATTGGAGGAGTCGATaGACAAAGGTACCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRNWRSR*TKVPLR
Trigger: TCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCACAAAGGTACCTTTGCGATTTCTTGCCTATGTCGTaGACGTCGCCTTTAACAGTG +
Preference number: 4 (lower is better)
Translates to: SFNHSKIGGVDAQRYLCDFLPMS*TSPLTV
Trigger: CACTGTTAAAGGCGACGTGCACGACATAGGCAAGAA...ATCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCTCCAACTATGTTCTTaGCTATGTCGTGCACGTCGC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCLQLCS*LCRARR
Trigger: GCGACGTGCACGACATAGGCAAGAACATAGTTGGAG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp GAAGGAGTGATGAGTCCTGACAGGCCAATTATATCTGCTTTGTGGTCAAGAGCAGACATGGATTACAGGTaGACTGTATCTCGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: EGVMSPDRPIISALWSRADMDYR*TVSRSY
Trigger: ATAGCTCCGAGATACAGTGCACCTGTAATCCATGTC...TGCTCTTGACCACAAAGCAGATATAATTGGCCTGTCAGGACTCATCACTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGGACATGGATTACAGGTaGACTGTATCTCGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRDMDYR*TVSRSY
Trigger: ATAGCTCCGAGATACAGTGCACCTGTAATCCATGTC...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTACTTGCCCCGGAGCTaGCAGACATCAAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAYLPRS*QTSKKG
Trigger: GCCTTTCTTTGATGTCTGGCAGCTCCGGGGCAAGTA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCAGTAGTATGGCTCCGTaGTGGCAGAGTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFSSMAP*WQSPSQ
Trigger: CTGAGAAGGACTCTGCCAGCACGGAGCCATACTACT...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AGTAACATATGTCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTACAATTTAGTAGTATGGCTCCGTaGTGGCAGAGTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SNICPSKAVAGGTLGLQFSSMAP*WQSPSQ
Trigger: CTGAGAAGGACTCTGCCAGCACGGAGCCATACTACT...AAATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGACATATGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTCACGGATGCCAGAATaGAAGGGAGCGATGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQSRMPE*KGAMKS
Trigger: AGACTTCATCGCTCCCTTGCATTCTGGCATCCGTGA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTTCATGGAGCTCTTCTaGAAAGGCCTCTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFFMELF*KGLCQP
Trigger: CGGCTGGCAGAGGCCTTTGCAGAAGAGCTCCATGAA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTAGACTGCTCGATGTCTaGGAGTCTCCACATGGTGAG +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQARLLDV*ESPHGE
Trigger: CTCACCATGTGGAGACTCGCAGACATCGAGCAGTCT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTCCACTTAGATTAAAATaGCCCATTTCTCACAGTATC +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCPLRLK*PISHSI
Trigger: GATACTGTGAGAAATGGGGCATTTTAATCTAAGTGG...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCAACCTCAGCCACAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCGCCCAGCTGAGAACCTaGTCAATCCTGGAAACAATT +
Preference number: 4 (lower is better)
Translates to: LNLSHRYVLPQCIILNLIAQLRT*SILETI
Trigger: AATTGTTTCCAGGATTGAGCAGGTTCTCAGCTGGGC...GATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTGTGGCTGAGGTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCGAGTTTGAGGCTTGTTaGTTGAGTGGTGGCACCATT +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPEFEAC*LSGGTI
Trigger: AATGGTGCCACCACTCAAGCAACAAGCCTCAAACTC...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGCTCCTAGTGGCCACATaGAAGAGTTTGCTGGACATA +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWLLVAT*KSLLDI
Trigger: TATGTCCAGCAAACTCTTGCATGTGGCCACTAGGAG...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp AATTATTTACTCCTTCCAGCAATCTGCCTCTTTCCATATAGAAGTTCTTTCTCTGCTGGGCGCGGCAACTaGTGGAGCACGTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NYLLLPAICLFPYRSSFSAGRGN*WSTCFL
Trigger: AAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCCAGC...AGAGAAAGAACTTCTATATGGAAAGAGGCAGATTGCTGGAAGGAGTAAATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAGCGGCAGAGAAGACGTaGTCTCCACAGGTGACGACG +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSAAEKT*SPQVTT
Trigger: CGTCGTCACCTGTGGAGAGCACGTCTTCTCTGCCGC...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTTCAGACCTTCGGGTTaGGACAGGTCTTGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFFRPSG*DRSWSA
Trigger: CGCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCATTTTCTGGCCACTCCTaGAGAGCACATGTTCATCCG +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPFSGHS*RAHVHP
Trigger: CGGATGAACATGTGCTCTGCAGGAGTGGCCAGAAAA...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCGGACCCAGAGCCCCTaGCACAAACCTCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFRTQSP*HKPLNS
Trigger: GGAATTAAGAGGTTTGTGGCAGGGGCTCTGGGTCCG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGGTGTTGGGAAGACCTaGATTGGGATAACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPGVGKT*IGITED
Trigger: GTCCTCTGTTATCCCAATGCAGGTCTTCCCAACACC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTGGCATCTACCTATGTaGTCCTGTCCCTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQWHLPM*SCPFHF
Trigger: GAAGTGGAAGGGACAGGAGCACATAGGTAGATGCCA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCGACTTCTGCACTATCTaGAACCCTCTGTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIDFCTI*NPLYLC
Trigger: GCACAAGTACAGAGGGTTGCAGATAGTGCAGAAGTC...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAAGTTCCTTCCTCACCTaGTGCAAGTTCACACTCAGC +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPSSFLT*CKFTLS
Trigger: GCTGAGTGTGAACTTGCAGCAGGTGAGGAAGGAACT...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCCAATCACAGCAAAATTaGAGGAGTCGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITQSQQN*RSRCTK
Trigger: CTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTG...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCGTAAGAGCTTCTCAGTaGCCTCAGGGTCTTTATTCC +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPVRASQ*PQGLYS
Trigger: GGAATAAAGACCCTGAGGCCACTGAGAAGCTCTTAC...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCATGAAAGGGATAAGGTaGCCAACAGCCTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITMKGIR*PTAFFI
Trigger: TATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCAT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCATTTTAACTGCTGTGTaGGTTTTTGAAGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: HDAAVVVTIILIGLAQLFILTAV*VFEVVA
Trigger: AGCAACCACTTCAAAAACCCACACAGCAGTTAAAAT...GAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCATCGTAGACCTTCCTaGCCTCTCCACCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCHRRPS*PLHLLF
Trigger: AAACAGTAGGTGGAGAGGCCAGGAAGGTCTACGATG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTGGATACTCTGTGCTaGCCAGAACCCAACCACACC +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQALDTLC*PEPNHT
Trigger: GGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTTGGATACTCTGTGCTaGCCAGAACCCAACCACACC +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGLDTLC*PEPNHT
Trigger: GGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTTGGATACTCTGTGCTaGCCAGAACCCAACCACACC +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFLDTLC*PEPNHT
Trigger: GGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GTTGCTCCTCCAATCAACAATGGAATCCTTATAGCTAATCTCTCCATTTCCTTGTTGGATACTCTGTGCTaGCCAGAACCCAACCACACC +
Preference number: 4 (lower is better)
Translates to: VAPPINNGILIANLSISLLDTLC*PEPNHT
Trigger: GGTGTGGTTGGGTTCTGGCCAGCACAGAGTATCCAA...CAAGGAAATGGAGAGATTAGCTATAAGGATTCCATTGTTGATTGGAGGAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTAGTATGGCTCCGTGCTaGCAGAGTCCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSSMAPC*QSPSQP
Trigger: AGGCTGAGAAGGACTCTGCCAGCACGGAGCCATACT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTAAAAAGACGACTAAGTaGCCTCCTAGATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFKKTTK*PPRFHC
Trigger: ACAGTGGAATCTAGGAGGCCACTTAGTCGTCTTTTT...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTGGTTGCGACAGGTCTTaGAGCGCGGGTGACATGTTG +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFGCDRS*SAGDML
Trigger: CAACATGTCACCCGCGCTCCAAGACCTGTCGCAACC...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTTTAGCTTCTCCCGCTaGATCATGGTCCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGFSFSR*IMVPIP
Trigger: AGGGATGGGGACCATGATCCAGCGGGAGAAGCTAAA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000650888.1
CDS-3UTR CCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCGGCCTTTCCACAGATaGGGACACAGAGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGRPFHR*GHRECL
Trigger: AAGACACTCTCTGTGTCCCCATCTGTGGAAAGGCCG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCCCTTTGGCCTGCTCTTaGTATGCTTCAACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSLWISSYTGRFPAFTIPPLACS*YASTSS
Trigger: TGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGG...GGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp ATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATCATCCAGAAGTCCTTTaGCCTGCTCTTGGTATGCTT +
Preference number: 4 (lower is better)
Translates to: MDIIIHREVSSIHYPHVHHPEVL*PALGML
Trigger: AAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATG...ATGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TCTTTCTTTTTCCATGAAAGGGATAAGGTGGCCAACAGCCTTCTTCATAACCCGCATCCAGAAGTCCTTTaGCCTGCTCTTGGTATGCTT +
Preference number: 4 (lower is better)
Translates to: SFFFHERDKVANSLLHNPHPEVL*PALGML
Trigger: AAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATG...CGGGTTATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCATGGAAAAAGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCATCCAGAAGTCCTTTaGCCTGCTCTTGGTATGCTT +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPHPEVL*PALGML
Trigger: AAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGAAAAGCAGTGGCAGGTaGAACTCTAGGCTTACAATT +
Preference number: 4 (lower is better)
Translates to: LPFLGRRRTSWKDLHLFWKSSGR*NSRLTI
Trigger: AATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTT...CCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAAAAGCAGTGGCAGGTaGAACTCTAGGCTTACAATT +
Preference number: 4 (lower is better)
Translates to: CIASRMASIPRKEKDKLEKSSGR*NSRLTI
Trigger: AATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTT...TTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTACAATTTTTCACAGCTTCTGGTGTACAGCACACTaGTTCATCAGGCTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SFKSSGRWNSRLTIFHSFWCTAH*FIRLSK
Trigger: CTTGCTTAGCCTGATGAACCAGTGTGCTGTACACCA...GAAGCTGTGAAAAATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650888.1
3UTR CAA 72 bp CTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATaGCACTTGGACCATCTAGCATGCCATCATCCATGT +
Preference number: 4 (lower is better)
Translates to: LARKQLSCKIWS*HLDHLACHHPC
Trigger: ACATGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
3UTR CAA 72 bp AAGAAGTCGTCCTCTCCTTCCTTCAGACTAATGCTATaGACAATGCACTTCCCTTGGCAGCACTTTAACCCA +
Preference number: 4 (lower is better)
Translates to: KKSSSPSFRLML*TMHFPWQHFNP
Trigger: TGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCTGAAGGAAGGAGAGGACGACTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
3UTR CAA 72 bp ATTGGCAGAGACAGACCAGAGCTCAGGGCTTATGAGTaGTCTGTGAATTATTTACTCCTTCCAGCAATCTGC +
Preference number: 4 (lower is better)
Translates to: IGRDRPELRAYE*SVNYLLLPAIC
Trigger: GCAGATTGCTGGAAGGAGTAAATAATTCACAGACAACTCATAAGCCCTGAGCTCTGGTCTGTCTCTGCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCCCGGGTGCACACTCTaGTTTTTGTGTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFPGCTL*FLCLFL
Trigger: CAGAAACAGACACAAAAATCAGAGTGTGCACCCGGG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCACTCCACTCATCAGTCTaGATGACTTTCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPLHSSV*MTFFPP
Trigger: AGGAGGGAAGAAAGTCATTCAGACTGATGAGTGGAG...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTGGGAGCGATGAAGTCTaGGAGGCAGTAGTATGGCTC +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFGSDEV*EAVVWL
Trigger: GAGCCATACTACTGCCTCTCAGACTTCATCGCTCCC...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGCAGGTTGACTTGCTTTaGAATCAAACGACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWQVDLL*NQTTSV
Trigger: GACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTG...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTGGCTTCAGTGTTTCTaGCAAGCAAGCAGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFWLQCF*QASSER
Trigger: GCGCTCACTGCTTGCTTGTCAGAAACACTGAAGCCA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GGCATCATCGTAGACCTTCCTGGCCTCTCCACCTACTGTTTTGTCGTTAAATATTCCTGGCTAACACAGTaGAATCCTGTCTCTACTTTT +
Preference number: 4 (lower is better)
Translates to: GIIVDLPGLSTYCFVVKYSWLTQ*NPVSTF
Trigger: AAAAGTAGAGACAGGATTTCACTGTGTTAGCCAGGA...ATATTTAACGACAAAACAGTAGGTGGAGAGGCCAGGAAGGTCTACGATGATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGATGGTAAGAAATGAGTaGCTTTATGCTGCCCACTTG +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRMVRNE*LYAAHL
Trigger: CAAGTGGGCAGCATAAAGTCACTCATTTCTTACCAT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GTTGCTCCTCCAATCAACAATGGAATCCTTATAGCTAATCTCTCCATTTCCTTGTCTGCAGAATGGCATTaGTCTCATCCCGCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: VAPPINNGILIANLSISLSAEWH*SHPAGF
Trigger: AAACCCTGCGGGATGAGATCAATGCCATTCTGCAGA...CAAGGAAATGGAGAGATTAGCTATAAGGATTCCATTGTTGATTGGAGGAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCAAGCTCATCAAATGTaGTGTTCCTATAATCCGGCC +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPQAHQM*CSYNPA
Trigger: GGCCGGATTATAGGAACATCACATTTGATGAGCTTG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCAGAGTGGTTCTCCATaGGACACGCTGATGACAAAT +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQQSGSP*DTLMTN
Trigger: ATTTGTCATCAGCGTGTCTCATGGAGAACCACTCTG...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGCAATTTCCCTGATATaGTCTGGTGTTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPAISLI*SGVDPQ
Trigger: CTGTGGGTCAACACCAGATCATATCAGGGAAATTGC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCTTCAGCAATTTCCCTaGTATGATCTGGTGTTGACC +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPLQQFP*YDLVLT
Trigger: GGTCAACACCAGATCATATCAGGGAAATTGCTGAAG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCCTTCAGCAATTTCCCTaGTATGATCTGGTGTTGACC +
Preference number: 4 (lower is better)
Translates to: SSLWISSYTGRFPAFTIPLQQFP*YDLVLT
Trigger: GGTCAACACCAGATCATATCAGGGAAATTGCTGAAG...GGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTGTACGGTCCAATCCTaGAGGGCTCTAGACCAGACA +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFCTVQS*RALDQT
Trigger: TGTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCATATGCTCCATAGATaGTCCCATCGCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSHMLHR*SHRTAA
Trigger: GGCTGCAGTGCGATGGGATCATCTATGGAGCATATG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGATGGAATCCCCAGAATaGTGGTGTTTGGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQMESPE*WCLEMA
Trigger: TGCCATCTCCAAACACCATCATTCTGGGGATTCCAT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAATGGAATCCCCAGAATaGTGGTGTTTGGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPMESPE*WCLEMA
Trigger: TGCCATCTCCAAACACCATCATTCTGGGGATTCCAT...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTAGGGCTTCCAAGACATaGGGCAGGGTCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFRASKT*GRVRHG
Trigger: TCCATGTCTGACCCTGCCTCATGTCTTGGAAGCCCT...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTCAGCAAGGGCTGTATaGAATGTGCATGGCGGTGTT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFSARAV*NVHGGV
Trigger: AACACCGCCATGCACATTTCATACAGCCCTTGCTGA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGACAGCGCTTTCTTTCTaGGAGAGAGAAAACCATCAT +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRTALSF*ERENHH
Trigger: ATGATGGTTTTCTCTCTCTCAGAAAGAAAGCGCTGT...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTATAGCAAGTATGCCATaGACTGAGGGTTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFIASMP*TEGFVL
Trigger: CAAAACAAAACCCTCAGTTCATGGCATACTTGCTAT...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTGAGTTCCCTCACCTCTaGTCCCCTAATCCCATTCCG +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFEFPHL*SPNPIP
Trigger: CGGAATGGGATTAGGGGATCAGAGGTGAGGGAACTC...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCTTCATAACCCGGGCTaGCTTTATAACCTTCACAAG +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPLHNPG*LYNLHK
Trigger: CTTGTGAAGGTTATAAAGTCAGCCCGGGTTATGAAG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535889.6
CDS-3UTR GCA 90 bp AGACTAATGCTATTGACAATGCACTTCCCTTGGCAGCACTTTAACCCAGCTTCAAATTGGAGGAGTCGATaGACAAAGGTACCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: RLMLLTMHFPWQHFNPASNWRSR*TKVPLR
Trigger: TCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATT...TGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTAATTGGAGGAGTCGATaGACAAAGGTACCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: ELQKFLMDIIIHREVSSINWRSR*TKVPLR
Trigger: TCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATT...AATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCAAATTGGAGGAGTCGATaGACAAAGGTACCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: YGYHHTQGGFQHSLSPCPNWRSR*TKVPLR
Trigger: TCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATT...TGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCGAAAACCCCATGCATTaGTTCTCGAATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPENPMH*FSNGFH
Trigger: ATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTC...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCATGTTGACAGAAAACCCCATGCATTaGTTCTCGAATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: QNLVIALGPSSMPSSMLTENPMH*FSNGFH
Trigger: ATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTC...TGTCAACATGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR GCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGGACATGGATTACAGGTaGACTGTATCTCGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWDMDYR*TVSRSY
Trigger: ATAGCTCCGAGATACAGTGCACCTGTAATCCATGTC...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTACTTGCCCCGGAGCTaGCAGACATCAAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSYLPRS*QTSKKG
Trigger: GCCTTTCTTTGATGTCTGGCAGCTCCGGGGCAAGTA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTGTCTTGGATACTCTGTaGTGGCCAGAACCCAACCAC +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSVLDTL*WPEPNH
Trigger: GTGGTTGGGTTCTGGCCAGCACAGAGTATCCAAGAC...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTAGTAGTATGGCTCCGTaGTGGCAGAGTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSSSMAP*WQSPSQ
Trigger: CTGAGAAGGACTCTGCCAGCACGGAGCCATACTACT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTTCATGGAGCTCTTCTaGAAAGGCCTCTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFFMELF*KGLCQP
Trigger: CGGCTGGCAGAGGCCTTTGCAGAAGAGCTCCATGAA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACGTCCAGCTGCTCACTaGCACAGTAGGCCCACAGTT +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSRPAAH*HSRPTV
Trigger: AACTGTGGGCCTACTGTGGCAGTGAGCAGCTGGACG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GTTGCTCCTCCAATCAACAATGGAATCCTTATAGCTAATCTCTCCATTTCCTTGCTAATGCCTGTAGACTaGTCGATGTCTGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VAPPINNGILIANLSISLLMPVD*SMSASL
Trigger: GAGACTCGCAGACATCGAGCAGTCTACAGGCATTAG...CAAGGAAATGGAGAGATTAGCTATAAGGATTCCATTGTTGATTGGAGGAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTACTGCAGGAAGACCCTaGTCCTCTACAAGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSTAGRP*SSTRFH
Trigger: GTGGAACCTTGTAGAGGAGCAGGGTCTTCCTGCAGT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTGCCAAAGGGAGTTCTaGAGCCATTTAGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFCQREF*SHLVQP
Trigger: AGGCTGGACTAAATGGCTGCAGAACTCCCTTTGGCA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCAAGCAGTGAGCGCATaGCTTTTGCCAAAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGQAVSA*LLPKGV
Trigger: AACTCCCTTTGGCAAAAGGCATGCGCTCACTGCTTG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCCACATGCAAGAGTTTaGTGGACATACAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGPHARV*WTYRWE
Trigger: CTCCCACCTGTATGTCCAGCAAACTCTTGCATGTGG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CCAGACAGTAACATATGTCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTATGTTTCAATGATATCTaGCCCAGCCAGCAAGTATTC +
Preference number: 4 (lower is better)
Translates to: PDSNICPSKAVAGGTLGLCFNDI*PSQQVF
Trigger: GAATACTTGCTGGCTGGGGCAGATATCATTGAAACA...TAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGACATATGTTACTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGTGTTTCAATGATATCTaGCCCAGCCAGCAAGTATTC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRCFNDI*PSQQVF
Trigger: GAATACTTGCTGGCTGGGGCAGATATCATTGAAACA...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATGGCCTGCTCTTGGTATaGTTCAACAAGCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHGLLLV*FNKLIK
Trigger: TTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCC...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCGGTGTTGGGAAGACCTaGATTGGGATAACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFGVGKT*IGITED
Trigger: GTCCTCTGTTATCCCAATGCAGGTCTTCCCAACACC...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCATGTTGACAGCAAAATCCTTTAGGTaGTTGGCCATCATAGAAGGC +
Preference number: 4 (lower is better)
Translates to: QNLVIALGPSSMPSSMLTAKSFR*LAIIEG
Trigger: GCCTTCTATGATGGCCAAGCACCTAAAGGATTTTGC...TGTCAACATGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463959.1
CDS-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCGCAAAATCCTTTAGGTaGTTGGCCATCATAGAAGGC +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIAKSFR*LAIIEG
Trigger: GCCTTCTATGATGGCCAAGCACCTAAAGGATTTTGC...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCTGTGTCTGTTTCTGTTaGCTGTCCTTCTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: LGSTLTQLQSQQNWRSRCCVCFC*LSFFIK
Trigger: TTTGATGAAGAAGGACAGGCAACAGAAACAGACACA...GCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTATGATCCCATCGCACTaGAGCCTGACCTCCATCTCC +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFMIPSH*SLTSIS
Trigger: GGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCAT...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CCAGACAGTAACATATGTCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTACAATCACAGCAAAATTaGAGGAGTCGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: PDSNICPSKAVAGGTLGLQSQQN*RSRCTK
Trigger: CTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTG...TAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGACATATGTTACTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CCA 90 bp TCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGGTAAAGGAACAATCACAGCAAAATTaGAGGAGTCGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: SSIHYPHVHARLDCMVKEQSQQN*RSRCTK
Trigger: CTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTG...TTCCTTTACCATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQTMHFP*QHFNPA
Trigger: AGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCTMHFP*QHFNPA
Trigger: AGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GCAACATTACAGCGCTCTCCAATGTTAACAAAGTTGGTGTACGGTCCAATCCTGGACCTCCACTTATTCTaGCTCCAGGTAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: ATLQRSPMLTKLVYGPILDLHLF*LQVMFL
Trigger: AAGAAACATTACCTGGAGCCAGAATAAGTGGAGGTC...CAGGATTGGACCGTACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTGCATTGCTTCTCGAATaGCTTCCATTCCTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAALLLE*LPFLGR
Trigger: CCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGC...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GTTGCTCCTCCAATCAACAATGGAATCCTTATAGCTAATCTCTCCATTTCCTTGGCATTGCTTCTCGAATaGCTTCCATTCCTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VAPPINNGILIANLSISLALLLE*LPFLGR
Trigger: CCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGC...CAAGGAAATGGAGAGATTAGCTATAAGGATTCCATTGTTGATTGGAGGAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGTGCAGAAGTTCCTTATaGATATCATCATACACAGGG +
Preference number: 4 (lower is better)
Translates to: LPFLGRRRTSWKDLHLFWCRSSL*ISSYTG
Trigger: CCCTGTGTATGATGATATCCATAAGGAACTTCTGCA...CCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCAGTAAGAGCTTCTCAGTaGCCTCAGGGTCTTTATTCC +
Preference number: 4 (lower is better)
Translates to: LSCKIWSLHLDHLACHHPVRASQ*PQGLYS
Trigger: GGAATAAAGACCCTGAGGCCACTGAGAAGCTCTTAC...TGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCTTTTCATCTAACAGCTaGGAACACACCACCACACTC +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPFSSNS*EHTTTL
Trigger: GAGTGTGGTGGTGTGTTCCCAGCTGTTAGATGAAAA...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCATCGTAGACCTTCCTaGCCTCTCCACCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFHRRPS*PLHLLF
Trigger: AAACAGTAGGTGGAGAGGCCAGGAAGGTCTACGATG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTAGTATGGCTCCGTGCTaGCAGAGTCCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFSMAPC*QSPSQP
Trigger: AGGCTGAGAAGGACTCTGCCAGCACGGAGCCATACT...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCACCTCAACCTGATCCTTaGAAATCTTCCCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPPQPDP*KSSPQQ
Trigger: TTGCTGTGGGGAAGATTTCCAAGGATCAGGTTGAGG...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp ATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTTTGTTGCTTGAGTGGTaGCACCATTCTTCATTACTG +
Preference number: 4 (lower is better)
Translates to: MASIPRKEKDKLERPPLILLLEW*HHSSLL
Trigger: CAGTAATGAAGAATGGTGCCACCACTCAAGCAACAA...AATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTATTCATGAACAAAGATaGTTCTTCATTTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCIHEQR*FFICSS
Trigger: GGAGGAACAAATGAAGAACCATCTTTGTTCATGAAT...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCGGCCTTTCCACAGATaGGGACACAGAGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFRPFHR*GHRECL
Trigger: AAGACACTCTCTGTGTCCCCATCTGTGGAAAGGCCG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp ATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCAAACAAGGCTGCCTTaGCATTGGCAGTATCAAAAA +
Preference number: 4 (lower is better)
Translates to: MASIPRKEKDKLERPPLIQTRLP*HWQYQK
Trigger: TTTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTG...AATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GCAACATTACAGCGCTCTCCAATGTTAACAAAGTTGGTGTACGGTCCAATCCTGCAAACAAGGCTGCCTTaGCATTGGCAGTATCAAAAA +
Preference number: 4 (lower is better)
Translates to: ATLQRSPMLTKLVYGPILQTRLP*HWQYQK
Trigger: TTTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTG...CAGGATTGGACCGTACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTAGTCACCAAAGGTGTTaGGAAGACCTGCATTGGGAT +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCSHQRC*EDLHWD
Trigger: ATCCCAATGCAGGTCTTCCCAACACCTTTGGTGACT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTTGACATCCAACACCTaGGCTCCCATTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFLTSNT*APISTC
Trigger: GCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGGATGGTGTTACTGACTaGCAGAAGAAATTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRDGVTD*QKKFSL
Trigger: GAGACTGAATTTCTTCTGCCAGTCAGTAACACCATC...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTAGCCTCCTGAATAGCTaGGTTTACAGGCATGTGACA +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCSLLNS*VYRHVT
Trigger: TGTCACATGCCTGTAAACCCAGCTATTCAGGAGGCT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGACATTTACCTTATGGATaGCAGAGATTGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRHLPYG*QRLSVI
Trigger: GATCACAGACAATCTCTGCCATCCATAAGGTAAATG...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCTCCACTCATCAGTCTaGATGACTTTCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGLHSSV*MTFFPP
Trigger: AGGAGGGAAGAAAGTCATTCAGACTGATGAGTGGAG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCGTCCTTCAATTATATTaGGAGGTCGGGGATATTTTT +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITVLQLY*EVGDIF
Trigger: AAAAATATCCCCGACCTCTCAATATAATTGAAGGAC...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTGTCCTTCAATTATATTaGGAGGTCGGGGATATTTTT +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFVLQLY*EVGDIF
Trigger: AAAAATATCCCCGACCTCTCAATATAATTGAAGGAC...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCGCTGACTTTATAACCTaGGGTAGAAACATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITADFIT*GRNIFP
Trigger: TGGAAAAATGTTTCTACCTCAGGTTATAAAGTCAGC...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGAGGAGTGATGAGTCCTaGCAGGCCAATTATATCTGC +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGRSDES*QANYIC
Trigger: GCAGATATAATTGGCCTGTCAGGACTCATCACTCCT...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATCCACTTTTTCTGGCTTaGCTTAAGGGTAAGTATCTC +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHPLFLA*LKGKYL
Trigger: GAGATACTTACCCTTAAGTCAAGCCAGAAAAAGTGG...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTGCCCGGAGTTTCTTTTaGCTAATCAGTGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAARSFF*LISVFS
Trigger: GCTGAACACACTGATTAGTCAAAAGAAACTCCGGGC...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCACAGGTTGACTTGCTTTaGAATCAAACGACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPQVDLL*NQTTSV
Trigger: GACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTG...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCTGACAAGCAAGCAGTaGGCGCATGCCTTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFLTSKQ*AHAFCQ
Trigger: TTGGCAAAAGGCATGCGCTCACTGCTTGCTTGTCAG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCAGGGGTACGGAAATATaGAATTATGGGAGGACGAAA +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIRGTEI*NYGRTK
Trigger: TTTCGTCCTCCCATAATTTCATATTTCCGTACCCCT...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TCTTTCTTTTTCCATGAAAGGGATAAGGTGGCCAACAGCCTTCTTCATAACCCGAGGGGTACGGAAATATaGAATTATGGGAGGACGAAA +
Preference number: 4 (lower is better)
Translates to: SFFFHERDKVANSLLHNPRGTEI*NYGRTK
Trigger: TTTCGTCCTCCCATAATTTCATATTTCCGTACCCCT...CGGGTTATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCATGGAAAAAGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTGAGGCTTGTTGCTTaGGTGGTGGCACCATTCTTC +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSLRLVA*VVAPFF
Trigger: GAAGAATGGTGCCACCACTCAAGCAACAAGCCTCAA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATTTGCCACCACCATCTTaGAGTAGGATGAGTGTATAT +
Preference number: 4 (lower is better)
Translates to: CLARKQLSCKIWSLHLDHLPPPS*SRMSVY
Trigger: ATATACACTCATCCTACTTCAAGATGGTGGTGGCAA...ATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAACATATGCACGGGTaGGTTTCTAGGCCCTTATTT +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCQHMHG*VSRPLF
Trigger: AAATAAGGGCCTAGAAACTCACCCGTGCATATGTTG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCAACATATGCACGGGTaGGTTTCTAGGCCCTTATTT +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQQHMHG*VSRPLF
Trigger: AAATAAGGGCCTAGAAACTCACCCGTGCATATGTTG...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTGCAGAATGGCATTaGTCTCATCCCGCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFSAEWH*SHPAGF
Trigger: AAACCCTGCGGGATGAGATCAATGCCATTCTGCAGA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTAAGTATTTGTTTCAATaGTATCTGCCCCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ELQKFLMDIIIHREVSSIKYLFQ*YLPQPA
Trigger: TGCTGGCTGGGGCAGATATCATTGAAACAAATACTT...AATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp TTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCACAAGCTCATCAAATGTaGTGTTCCTATAATCCGGCC +
Preference number: 4 (lower is better)
Translates to: LSCKIWSLHLDHLACHHPQAHQM*CSYNPA
Trigger: GGCCGGATTATAGGAACATCACATTTGATGAGCTTG...TGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR TCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCACTTCAGCAATTTCCCTaGTATGATCTGGTGTTGACC +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPLQQFP*YDLVLT
Trigger: GGTCAACACCAGATCATATCAGGGAAATTGCTGAAG...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGGGACTTCCAGACTCCTaGACTGTAAGAAATAAACAT +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRGLPDS*TVRNKH
Trigger: ATGTTTATTTCTTACAGTTCAGGAGTCTGGAAGTCC...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCAGAACCAACTGGATGTaGAGGTTGAGAAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITRTNWM*RLRKRK
Trigger: TTTTCTTTTTCTCAACCTTCACATCCAGTTGGTTCT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCACAGCGCTTTCTTTCTaGGAGAGAGAAAACCATCAT +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPITALSF*ERENHH
Trigger: ATGATGGTTTTCTCTCTCTCAGAAAGAAAGCGCTGT...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGGGGCCGCATCTAATATaGAATACTGAAGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGGPHLI*NTEGGC
Trigger: ACACCCACCTTCAGTATTTCATATTAGATGCGGCCC...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTGACAATACACATAGCTaGTTTATAGCAAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFDNTHS*FIASMP
Trigger: TGGCATACTTGCTATAAATCAGCTATGTGTATTGTC...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCGTGCCCAGCTCTTCTTaGCGTTTTAATGCATATACT +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIVPSSS*RFNAYT
Trigger: AGTATATGCATTAAAACGTCAAGAAGAGCTGGGCAC...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATGTGCCCAGCTCTTCTTaGCGTTTTAATGCATATACT +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHVPSSS*RFNAYT
Trigger: AGTATATGCATTAAAACGTCAAGAAGAGCTGGGCAC...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGGCAGAGATTGTCTGTaGTCAACAGCATTTGTGACT +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPGRDCL*STAFVT
Trigger: AGTCACAAATGCTGTTGATCACAGACAATCTCTGCC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTAATTGGAGGAGTCGATaGACAAAGGTACCTTTGCGA +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCNWRSR*TKVPLR
Trigger: TCGCAAAGGTACCTTTGTGCATCGACTCCTCCAATT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTTCTTGCCTATGTCGTaGACGTCGCCTTTAACAGTG +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFFLPMS*TSPLTV
Trigger: CACTGTTAAAGGCGACGTGCACGACATAGGCAAGAA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCTTGCCTATGTCGTaGACGTCGCCTTTAACAGTG +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAFLPMS*TSPLTV
Trigger: CACTGTTAAAGGCGACGTGCACGACATAGGCAAGAA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGACATGGATTACAGGTaGACTGTATCTCGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCDMDYR*TVSRSY
Trigger: ATAGCTCCGAGATACAGTGCACCTGTAATCCATGTC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTACTTGCCCCGGAGCTaGCAGACATCAAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFYLPRS*QTSKKG
Trigger: GCCTTTCTTTGATGTCTGGCAGCTCCGGGGCAAGTA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACCAGGTAGTCACGGATaGCAGAATGCAAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSPGSHG*QNARER
Trigger: TCGCTCCCTTGCATTCTGGCATCCGTGACTACCTGG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTAGACTGCTCGATGTCTaGGAGTCTCCACATGGTGAG +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFRLLDV*ESPHGE
Trigger: CTCACCATGTGGAGACTCGCAGACATCGAGCAGTCT...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCAAAAGCAGGTTGACTTaGTTTGAAATCAAACGACCT +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITKSRLT*FEIKRP
Trigger: AGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CCTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGAAAAGCAGGTTGACTTaGTTTGAAATCAAACGACCT +
Preference number: 4 (lower is better)
Translates to: PWQHFNPASITAKLEESMKSRLT*FEIKRP
Trigger: AGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT...CATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCAAGCAGTGAGCGCATaGCTTTTGCCAAAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFQAVSA*LLPKGV
Trigger: AACTCCCTTTGGCAAAAGGCATGCGCTCACTGCTTG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCGCCCAGCTGAGAACCTaGTCAATCCTGGAAACAATT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFAQLRT*SILETI
Trigger: AATTGTTTCCAGGATTGAGCAGGTTCTCAGCTGGGC...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCACTTATTTTGTTCCCCTaGTCAGAATGCCTACCTCTG +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPLILFP*SECLPL
Trigger: CAGAGGTAGGCATTCTGAGCAGGGGAACAAAATAAG...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCTTTTTAAAGCAGTGGTaGCTGTTTACACATCCACAA +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITFLKQW*LFTHPQ
Trigger: TTGTGGATGTGTAAACAGGCACCACTGCTTTAAAAA...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCCACATGCAAGAGTTTaGTGGACATACAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSPHARV*WTYRWE
Trigger: CTCCCACCTGTATGTCCAGCAAACTCTTGCATGTGG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCTCCTAGTGGCCACATaGAAGAGTTTGCTGGACATA +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGLLVAT*KSLLDI
Trigger: TATGTCCAGCAAACTCTTGCATGTGGCCACTAGGAG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GTGGCAGGTGGAACTCTAGGCTTACAATTTTTCACAGCTTCAGCAATTTCCCTGACCATAATCCTCTTCTaGAGAATGGCATTGATCTCA +
Preference number: 4 (lower is better)
Translates to: VAGGTLGLQFFTASAISLTIILF*RMALIS
Trigger: TGAGATCAATGCCATTCTGCAGAAGAGGATTATGGT...CAGGGAAATTGCTGAAGCTGTGAAAAATTGTAAGCCTAGAGTTCCACCTGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR GCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCTTAAAATGTCATTGTTaGCTTTCAGCGGCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPLKCHC*LSAAWH
Trigger: ATGCCAGGCCGCTGAAAGGCAACAATGACATTTTAA...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCTGTTTCAATGATATCTaGCCCAGCCAGCAAGTATTC +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPICFNDI*PSQQVF
Trigger: GAATACTTGCTGGCTGGGGCAGATATCATTGAAACA...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp ATGATGAGTTTAGCAAACTTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGGGCCTGCTCTTGGTATaGTTCAACAAGCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: MMSLANFLDPATLQRSPMGLLLV*FNKLIK
Trigger: TTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCC...CATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACTCATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGGCCTGCTCTTGGTATaGTTCAACAAGCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCGLLLV*FNKLIK
Trigger: TTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGAGAAGTCCTTTGGCCTaGTCTTGGTATGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQRSPLA*SWYAST
Trigger: TGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCAAGAAGTCCTTTGGCCTaGTCTTGGTATGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LSCKIWSLHLDHLACHHPRSPLA*SWYAST
Trigger: TGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCT...TGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGCACAATTTAATCCAATaGAGAGTGGTTCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRHNLIQ*RVVLHE
Trigger: CTCATGGAGAACCACTCTGCATTGGATTAAATTGTG...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGCAAAATCCTTTAGGTaGTTGGCCATCATAGAAGGC +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPAKSFR*LAIIEG
Trigger: GCCTTCTATGATGGCCAAGCACCTAAAGGATTTTGC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTGGGTTCTGCTGGCATaGTTCGAAACGCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGWVLLA*FETLFI
Trigger: AATGAAGAGCGTTTCGAAGCATGCCAGCAGAACCCA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CATGGTAAAGGAAAACCCCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGATTAAGTTGCAAAATCTaGTCATTGCACTTGGACCAT +
Preference number: 4 (lower is better)
Translates to: HGKGKPHALLLEWLPFLGLSCKI*SLHLDH
Trigger: ATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA...TCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCCTTTACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCT +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQATMHFP*QHFNPA
Trigger: AGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGGACCTCCACTTATTCTaGCTCCAGGTAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWDLHLF*LQVMFL
Trigger: AAGAAACATTACCTGGAGCCAGAATAAGTGGAGGTC...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTAGGAGAAGGACAAGTTaGAAAGACCTCCACTTATTC +
Preference number: 4 (lower is better)
Translates to: ELQKFLMDIIIHREVSSIRRRTS*KDLHLF
Trigger: GAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCT...AATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TCTTTCTTTTTCCATGAAAGGGATAAGGTGGCCAACAGCCTTCTTCATAACCCGAGGAGAAGGACAAGTTaGAAAGACCTCCACTTATTC +
Preference number: 4 (lower is better)
Translates to: SFFFHERDKVANSLLHNPRRRTS*KDLHLF
Trigger: GAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCT...CGGGTTATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCATGGAAAAAGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCAGGAGAAGGACAAGTTaGAAAGACCTCCACTTATTC +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIRRRTS*KDLHLF
Trigger: GAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCT...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTGCATTGCTTCTCGAATaGCTTCCATTCCTCGGAAGG +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSALLLE*LPFLGR
Trigger: CCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGC...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGTGCAGAAGTTCCTTATaGATATCATCATACACAGGG +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRCRSSL*ISSYTG
Trigger: CCCTGTGTATGATGATATCCATAAGGAACTTCTGCA...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCATGAAAGGGATAAGGTaGCCAACAGCCTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPMKGIR*PTAFFI
Trigger: TATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCAT...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATATGAAAGGGATAAGGTaGCCAACAGCCTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: CLARKQLSCKIWSLHLDHMKGIR*PTAFFI
Trigger: TATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCAT...ATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATGTGGGTTTTTGAAGTaGTTGCTCCTCCAATCAACA +
Preference number: 4 (lower is better)
Translates to: YGYHHTQGGFQHSLSPCPCGFLK*LLLQST
Trigger: TGTTGATTGGAGGAGCAACCACTTCAAAAACCCACA...TGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTGACGCGTCCAGGACATaGATTACAGGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSDASRT*ITGALY
Trigger: ATACAGTGCACCTGTAATCCATGTCCTGGACGCGTC...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTTTTTCATCTAACAGCTaGGAACACACCACCACACTC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCFSSNS*EHTTTL
Trigger: GAGTGTGGTGGTGTGTTCCCAGCTGTTAGATGAAAA...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GACTTTTGTTGCATGGATAAAATTAATGGCATACAAGTTGTGTTCCTCCATTCCAAACGTGGGCTTCACTaGGTGAGGTTCAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: DFCCMDKINGIQVVFLHSKRGLH*VRFRQP
Trigger: TGGCTGTCTGAACCTCACCCAGTGAAGCCCACGTTT...GGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCATCGTAGACCTTCCTaGCCTCTCCACCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSHRRPS*PLHLLF
Trigger: AAACAGTAGGTGGAGAGGCCAGGAAGGTCTACGATG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCATCGTAGACCTTCCTaGCCTCTCCACCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFHRRPS*PLHLLF
Trigger: AAACAGTAGGTGGAGAGGCCAGGAAGGTCTACGATG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAAGTATGGCTCCGTGCTaGCAGAGTCCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSSMAPC*QSPSQP
Trigger: AGGCTGAGAAGGACTCTGCCAGCACGGAGCCATACT...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp ATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTATTTGGACTTCAAATTaGAGAAGTAGAGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: MASIPRKEKDKLERPPLIIWTSN*RSRGLR
Trigger: TCTCAGGCCTCTACTTCTCCAATTTGAAGTCCAAAT...AATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTCCTCAACCTGATCCTTaGAAATCTTCCCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAPQPDP*KSSPQQ
Trigger: TTGCTGTGGGGAAGATTTCCAAGGATCAGGTTGAGG...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGGCTTGTTGCTTGAGTaGTGGCACCATTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPGLLLE*WHHSSL
Trigger: TAATGAAGAATGGTGCCACCACTCAAGCAACAAGCC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCAGGCTTGTTGCTTGAGTaGTGGCACCATTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: LSCKIWSLHLDHLACHHPGLLLE*WHHSSL
Trigger: TAATGAAGAATGGTGCCACCACTCAAGCAACAAGCC...TGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCATAGTACGCCCCATGTaGTCTCTTCAAACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPIVRPM*SLQTCF
Trigger: AAAGCAAGTTTGAAGAGACCACATGGGGCGTACTAT...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTTTAGCTTCTCCCGCTaGATCATGGTCCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFFSFSR*IMVPIP
Trigger: AGGGATGGGGACCATGATCCAGCGGGAGAAGCTAAA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCTCTTAATTCCTGTCTaGAGAGTTACCTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFLLIPV*RVTSSA
Trigger: TGCCGAGGAGGTAACTCTCCAGACAGGAATTAAGAG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GACTTTTGTTGCATGGATAAAATTAATGGCATACAAGTTGTGTTCCTCCATTCCCGGCCTTTCCACAGATaGGGACACAGAGAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: DFCCMDKINGIQVVFLHSRPFHR*GHRECL
Trigger: AAGACACTCTCTGTGTCCCCATCTGTGGAAAGGCCG...GGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCCTTTGGCCTGCTCTTaGTATGCTTCAACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFPLACS*YASTSS
Trigger: TGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCATCCAGAAGTCCTTTaGCCTGCTCTTGGTATGCTT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFHPEVL*PALGML
Trigger: AAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATCAAACAAGGCTGCCTTaGCATTGGCAGTATCAAAAA +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHQTRLP*HWQYQK
Trigger: TTTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTG...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTAGTCACCAAAGGTGTTaGGAAGACCTGCATTGGGAT +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQASHQRC*EDLHWD
Trigger: ATCCCAATGCAGGTCTTCCCAACACCTTTGGTGACT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGAAAAGCAGTGGCAGGTaGAACTCTAGGCTTACAATT +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWKSSGR*NSRLTI
Trigger: AATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTT...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTGTTGCATGGATAAAATTAATGGCATACAAGTTGTGTTCCTCCATTCCAGTCTTGACATCCAACACCTaGGCTCCCATTTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: FVAWIKLMAYKLCSSIPVLTSNT*APISTC
Trigger: GCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAA...GACTGGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATGATGGTGTTACTGACTaGCAGAAGAAATTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHDGVTD*QKKFSL
Trigger: GAGACTGAATTTCTTCTGCCAGTCAGTAACACCATC...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCCCGGGTGCACACTCTaGTTTTTGTGTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFPGCTL*FLCLFL
Trigger: CAGAAACAGACACAAAAATCAGAGTGTGCACCCGGG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGGTCCTTCAATTATATTaGGAGGTCGGGGATATTTTT +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRVLQLY*EVGDIF
Trigger: AAAAATATCCCCGACCTCTCAATATAATTGAAGGAC...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGAGTATCTCCTCTCCTTaGGAGACTCATAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGSISSP*ETHNGP
Trigger: AGGACCATTATGAGTCTCTCAAGGAGAGGAGATACT...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCAGTATCTCCTCTCCTTaGGAGACTCATAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFSISSP*ETHNGP
Trigger: AGGACCATTATGAGTCTCTCAAGGAGAGGAGATACT...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCATCCTGGCTAACACAGTaGAATCCTGTCTCTACTTTT +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPSWLTQ*NPVSTF
Trigger: AAAAGTAGAGACAGGATTTCACTGTGTTAGCCAGGA...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGTATGGATTTGGTAAATaGCATCAGGCTGAGTTATAC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRYGFGK*HQAELY
Trigger: GTATAACTCAGCCTGATGTCATTTACCAAATCCATA...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp ACAGAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCTATGGATTTGGTAAATaGCATCAGGCTGAGTTATAC +
Preference number: 4 (lower is better)
Translates to: TELQKFLMDIIIHREVSSYGFGK*HQAELY
Trigger: GTATAACTCAGCCTGATGTCATTTACCAAATCCATA...GCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAAAGTATTTGTTTCAATaGTATCTGCCCCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPKYLFQ*YLPQPA
Trigger: TGCTGGCTGGGGCAGATATCATTGAAACAAATACTT...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCAAGCTCATCAAATGTaGTGTTCCTATAATCCGGCC +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFQAHQM*CSYNPA
Trigger: GGCCGGATTATAGGAACATCACATTTGATGAGCTTG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCCTTGGAAATCTTCCCAAGCTCATCAAATGTaGTGTTCCTATAATCCGGCC +
Preference number: 4 (lower is better)
Translates to: QICSSSMHNPQPDPWKSSQAHQM*CSYNPA
Trigger: GGCCGGATTATAGGAACATCACATTTGATGAGCTTG...GGAAGATTTCCAAGGATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCAGAGTGGTTCTCCATaGGACACGCTGATGACAAAT +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSQSGSP*DTLMTN
Trigger: ATTTGTCATCAGCGTGTCTCATGGAGAACCACTCTG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCATGTACGGTCCAATCCTaGAGGGCTCTAGACCAGACA +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSCTVQS*RALDQT
Trigger: TGTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACA...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTCCCCCAAATCATGTTaGAATGGAATCCCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGSPKSC*NGIPRM
Trigger: CATTCTGGGGATTCCATTTCAACATGATTTGGGGGA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCGAAAACCCCATGCATTaGTTCTCGAATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFENPMH*FSNGFH
Trigger: ATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTC...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTGAAAACCCCATGCATTaGTTCTCGAATGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAENPMH*FSNGFH
Trigger: ATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTC...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTCATGCCAGACTTGATTaGATGGTAAAGGAAAACCCC +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAHARLD*MVKENP
Trigger: GGGGTTTTCCTTTACCATGCAATCAAGTCTGGCATG...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCATGCCAGACTTGATTaGATGGTAAAGGAAAACCCC +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFHARLD*MVKENP
Trigger: GGGGTTTTCCTTTACCATGCAATCAAGTCTGGCATG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCTTGCCTATGTCGTaGACGTCGCCTTTAACAGTG +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSFLPMS*TSPLTV
Trigger: CACTGTTAAAGGCGACGTGCACGACATAGGCAAGAA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGCCACTTAGATTAAAATaGCCCATTTCTCACAGTATC +
Preference number: 4 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRPLRLK*PISHSI
Trigger: GATACTGTGAGAAATGGGGCATTTTAATCTAAGTGG...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTGCCCAGCTGAGAACCTaGTCAATCCTGGAAACAATT +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFAQLRT*SILETI
Trigger: AATTGTTTCCAGGATTGAGCAGGTTCTCAGCTGGGC...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGTCACCAGGTCATTTTaGAAAGGTCAACATATGCAC +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCVTRSF*KGQHMH
Trigger: GTGCATATGTTGACCTTTGCAAAATGACCTGGTGAC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCGTCAGACCCAACCTTTaGAAATCTTATGGATATAAA +
Preference number: 4 (lower is better)
Translates to: SSEENRATPSPSESTVITVRPNL*KSYGYK
Trigger: TTTATATCCATAAGATTTGCAAAGGTTGGGTCTGAC...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp ATGATGAGTTTAGCAAACTTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGTTAAAATGTCATTGTTaGCTTTCAGCGGCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: MMSLANFLDPATLQRSPMLKCHC*LSAAWH
Trigger: ATGCCAGGCCGCTGAAAGGCAACAATGACATTTTAA...CATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACTCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTGTTTCAATGATATCTaGCCCAGCCAGCAAGTATTC +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQCFNDI*PSQQVF
Trigger: GAATACTTGCTGGCTGGGGCAGATATCATTGAAACA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGGGCCTGCTCTTGGTATaGTTCAACAAGCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGGLLLV*FNKLIK
Trigger: TTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCC...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR GCA 90 bp ATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATTGTGTCTGTTTCTGTTaGCTGTCCTTCTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: MDIIIHREVSSIHYPHVHCVCFC*LSFFIK
Trigger: TTTGATGAAGAAGGACAGGCAACAGAAACAGACACA...ATGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTCTCTTCTCCTCATATaGTCCATAGATGATCCCATC +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQSLLLI*SIDDPI
Trigger: GATGGGATCATCTATGGAGCATATGAGGAGAAGAGA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTGACTTCTGCACTATCTaGAACCCTCTGTACTTGTGC +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSDFCTI*NPLYLC
Trigger: GCACAAGTACAGAGGGTTGCAGATAGTGCAGAAGTC...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGGTTTTTAAAGACTTCTaGACTATCTGCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWVFKDF*TICNPL
Trigger: CAGAGGGTTGCAGATAGTGCAGAAGTCTTTAAAAAC...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCGTTTTTAAAGACTTCTaGACTATCTGCAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIVFKDF*TICNPL
Trigger: CAGAGGGTTGCAGATAGTGCAGAAGTCTTTAAAAAC...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp ATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGATTAAGTTGCAAAATCTaGTCATTGCACTTGGACCAT +
Preference number: 4 (lower is better)
Translates to: IASRMASIPRKEKDKLERLSCKI*SLHLDH
Trigger: ATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA...TCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGGACCTCCACTTATTCTaGCTCCAGGTAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQDLHLF*LQVMFL
Trigger: AAGAAACATTACCTGGAGCCAGAATAAGTGGAGGTC...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGAGGAGAAGGACAAGTTaGAAAGACCTCCACTTATTC +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQRRRTS*KDLHLF
Trigger: GAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCTGCAGAAGTTCCTTATaGATATCATCATACACAGGG +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPCRSSL*ISSYTG
Trigger: CCCTGTGTATGATGATATCCATAAGGAACTTCTGCA...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTTGCAGAAGTTCCTTATaGATATCATCATACACAGGG +
Preference number: 4 (lower is better)
Translates to: ELQKFLMDIIIHREVSSICRSSL*ISSYTG
Trigger: CCCTGTGTATGATGATATCCATAAGGAACTTCTGCA...AATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTTTTCATCTAACAGCTaGGAACACACCACCACACTC +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGFSSNS*EHTTTL
Trigger: GAGTGTGGTGGTGTGTTCCCAGCTGTTAGATGAAAA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATATTTGGACTTCAAATTaGAGAAGTAGAGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHIWTSN*RSRGLR
Trigger: TCTCAGGCCTCTACTTCTCCAATTTGAAGTCCAAAT...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTACAATTTTTCACAGCTTCATTTGGACTTCAAATTaGAGAAGTAGAGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SFKSSGRWNSRLTIFHSFIWTSN*RSRGLR
Trigger: TCTCAGGCCTCTACTTCTCCAATTTGAAGTCCAAAT...GAAGCTGTGAAAAATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCCTCAACCTGATCCTTaGAAATCTTCCCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFPQPDP*KSSPQQ
Trigger: TTGCTGTGGGGAAGATTTCCAAGGATCAGGTTGAGG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGAAAAAGACGACTAAGTaGCCTCCTAGATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQKKTTK*PPRFHC
Trigger: ACAGTGGAATCTAGGAGGCCACTTAGTCGTCTTTTT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTTGTTGCTTGAGTGGTaGCACCATTCTTCATTACTG +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQLLLEW*HHSSLL
Trigger: CAGTAATGAAGAATGGTGCCACCACTCAAGCAACAA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTAAGAAAAAGATGACATaGTTGAGTTTGAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFKKKMT*LSLRLV
Trigger: AACAAGCCTCAAACTCAACCATGTCATCTTTTTCTT...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GAGTCGATGCACAAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGAAGAAAAAGATGACATaGTTGAGTTTGAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: ESMHKGTFAMSGSEAIKLKKKMT*LSLRLV
Trigger: AACAAGCCTCAAACTCAACCATGTCATCTTTTTCTT...CAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCATCGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTATTCATGAACAAAGATaGTTCTTCATTTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFIHEQR*FFICSS
Trigger: GGAGGAACAAATGAAGAACCATCTTTGTTCATGAAT...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCTCTTAATTCCTGTCTaGAGAGTTACCTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSLLIPV*RVTSSA
Trigger: TGCCGAGGAGGTAACTCTCCAGACAGGAATTAAGAG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCCTTTGGCCTGCTCTTaGTATGCTTCAACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSPLACS*YASTSS
Trigger: TGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTGGGAAGACCTGCATTaGGATAACAGAGGACATAGG +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFWEDLH*DNRGHR
Trigger: CCTATGTCCTCTGTTATCCCAATGCAGGTCTTCCCA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGAAAAGCAGTGGCAGGTaGAACTCTAGGCTTACAATT +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQKSSGR*NSRLTI
Trigger: AATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCTCTGTCTTAGCAAATaGTCCAGCCATCCACTCATT +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGLCLSK*SSHPLI
Trigger: AATGAGTGGATGGCTGGACCATTTGCTAAGACAGAG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAAGGCAGGGTCAGACATaGAAGGCTTTGCATGCCTCT +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSRQGQT*KALHAS
Trigger: AGAGGCATGCAAAGCCTTCCATGTCTGACCCTGCCT...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTAGCCTCCTGAATAGCTaGGTTTACAGGCATGTGACA +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFSLLNS*VYRHVT
Trigger: TGTCACATGCCTGTAAACCCAGCTATTCAGGAGGCT...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTATTACATTTACCTTATaGATGGCAGAGATTGTCTGT +
Preference number: 4 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFITFTL*MAEIVC
Trigger: ACAGACAATCTCTGCCATCCATAAGGTAAATGTAAT...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAATTACATTTACCTTATaGATGGCAGAGATTGTCTGT +
Preference number: 4 (lower is better)
Translates to: REFCSHLVQPLENEVFRRITFTL*MAEIVC
Trigger: ACAGACAATCTCTGCCATCCATAAGGTAAATGTAAT...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGTGCCGAGTTTCTCTCTaGGAAATGAAGAAACAAGAT +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWCRVSL*EMKKQD
Trigger: ATCTTGTTTCTTCATTTCCCAGAGAGAAACTCGGCA...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACCCGGGTGCACACTCTaGTTTTTGTGTCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSPGCTL*FLCLFL
Trigger: CAGAAACAGACACAAAAATCAGAGTGTGCACCCGGG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCAACCTCAGCCACAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCGCTGACTTTATAACCTaGGGTAGAAACATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LNLSHRYVLPQCIILNLIADFIT*GRNIFP
Trigger: TGGAAAAATGTTTCTACCTCAGGTTATAAAGTCAGC...GATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTGTGGCTGAGGTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp TTTGTTGCATGGATAAAATTAATGGCATACAAGTTGTGTTCCTCCATTCCAGTCAGGAGTGATGAGTCCTaGCAGGCCAATTATATCTGC +
Preference number: 4 (lower is better)
Translates to: FVAWIKLMAYKLCSSIPVRSDES*QANYIC
Trigger: GCAGATATAATTGGCCTGTCAGGACTCATCACTCCT...GACTGGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCCACTTTTTCTGGCTTaGCTTAAGGGTAAGTATCTC +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFPLFLA*LKGKYL
Trigger: GAGATACTTACCCTTAAGTCAAGCCAGAAAAAGTGG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTCCACTTTTTCTGGCTTaGCTTAAGGGTAAGTATCTC +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAPLFLA*LKGKYL
Trigger: GAGATACTTACCCTTAAGTCAAGCCAGAAAAAGTGG...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTGCCCGGAGTTTCTTTTaGCTAATCAGTGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFARSFF*LISVFS
Trigger: GCTGAACACACTGATTAGTCAAAAGAAACTCCGGGC...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTCCTGGCTAACACAGTaGAATCCTGTCTCTACTTTT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFSWLTQ*NPVSTF
Trigger: AAAAGTAGAGACAGGATTTCACTGTGTTAGCCAGGA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCATCTTGAAGTAGGATaGGTGTATATTTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPHLEVG*VYILHA
Trigger: TGCATGCAAAATATACACTCATCCTACTTCAAGATG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATCATCTTGAAGTAGGATaGGTGTATATTTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHHLEVG*VYILHA
Trigger: TGCATGCAAAATATACACTCATCCTACTTCAAGATG...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTTGCCACCACCATCTTaGAGTAGGATGAGTGTATAT +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGLPPPS*SRMSVY
Trigger: ATATACACTCATCCTACTTCAAGATGGTGGTGGCAA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp ACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCATATGGATTTGGTAAATaGCATCAGGCTGAGTTATAC +
Preference number: 4 (lower is better)
Translates to: TFAMSGSEAIKLQNLVIAYGFGK*HQAELY
Trigger: GTATAACTCAGCCTGATGTCATTTACCAAATCCATA...TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp TCTTTCTTTTTCCATGAAAGGGATAAGGTGGCCAACAGCCTTCTTCATAACCCGTATGGATTTGGTAAATaGCATCAGGCTGAGTTATAC +
Preference number: 4 (lower is better)
Translates to: SFFFHERDKVANSLLHNPYGFGK*HQAELY
Trigger: GTATAACTCAGCCTGATGTCATTTACCAAATCCATA...CGGGTTATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCATGGAAAAAGAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTAAGTATTTGTTTCAATaGTATCTGCCCCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAKYLFQ*YLPQPA
Trigger: TGCTGGCTGGGGCAGATATCATTGAAACAAATACTT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAGATATGATCTGGTGTTaGCCCACAGCATCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSDMIWC*PTASSN
Trigger: GTTGGAGGATGCTGTGGGTCAACACCAGATCATATC...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGAAAAGTGTTATGGTCTaGTGTATCCCCCAAATCATG +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQKSVMV*CIPQIM
Trigger: CATGATTTGGGGGATACATCAGACCATAACACTTTT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCAGAACCAACTGGATGTaGAGGTTGAGAAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIRTNWM*RLRKRK
Trigger: TTTTCTTTTTCTCAACCTTCACATCCAGTTGGTTCT...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTGGCAGAGATTGTCTGTaGTCAACAGCATTTGTGACT +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFGRDCL*STAFVT
Trigger: AGTCACAAATGCTGTTGATCACAGACAATCTCTGCC...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCATGCCAGACTTGATTaGATGGTAAAGGAAAACCCC +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFHARLD*MVKENP
Trigger: GGGGTTTTCCTTTACCATGCAATCAAGTCTGGCATG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTTCTTTTTCCATGAAAGGGATAAGGTGGCCAACAGCCTTCTTCATAACCCGAAAAGCAGGTTGACTTaGTTTGAAATCAAACGACCT +
Preference number: 4 (lower is better)
Translates to: SFFFHERDKVANSLLHNPKSRLT*FEIKRP
Trigger: AGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT...CGGGTTATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCATGGAAAAAGAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGCCACTTAGATTAAAATaGCCCATTTCTCACAGTATC +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWPLRLK*PISHSI
Trigger: GATACTGTGAGAAATGGGGCATTTTAATCTAAGTGG...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TCTTTCTTTTTCCATGAAAGGGATAAGGTGGCCAACAGCCTTCTTCATAACCCGCCACTTAGATTAAAATaGCCCATTTCTCACAGTATC +
Preference number: 4 (lower is better)
Translates to: SFFFHERDKVANSLLHNPPLRLK*PISHSI
Trigger: GATACTGTGAGAAATGGGGCATTTTAATCTAAGTGG...CGGGTTATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCATGGAAAAAGAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAATGGGAGGACGAAAATaGCCAGAAAGCATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSMGGRK*PESMAA
Trigger: AGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCCAT...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGTTTTTAAAGCAGTGGTaGCTGTTTACACATCCACAA +
Preference number: 4 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWFLKQW*LFTHPQ
Trigger: TTGTGGATGTGTAAACAGGCACCACTGCTTTAAAAA...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCAACCATAATCCTCTTCTaGAGAATGGCATTGATCTCA +
Preference number: 4 (lower is better)
Translates to: LSCKIWSLHLDHLACHHPTIILF*RMALIS
Trigger: TGAGATCAATGCCATTCTGCAGAAGAGGATTATGGT...TGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGACCATAATCCTCTTCTaGAGAATGGCATTGATCTCA +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQTIILF*RMALIS
Trigger: TGAGATCAATGCCATTCTGCAGAAGAGGATTATGGT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCACACAATTTAATCCAATaGAGAGTGGTTCTCCATGAG +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPHNLIQ*RVVLHE
Trigger: CTCATGGAGAACCACTCTGCATTGGATTAAATTGTG...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAGGTGTTGGGAAGACCTaGATTGGGATAACAGAGGAC +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSGVGKT*IGITED
Trigger: GTCCTCTGTTATCCCAATGCAGGTCTTCCCAACACC...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTGCAAAATCCTTTAGGTaGTTGGCCATCATAGAAGGC +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSAKSFR*LAIIEG
Trigger: GCCTTCTATGATGGCCAAGCACCTAAAGGATTTTGC...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCATGTGTCTGTTTCTGTTaGCTGTCCTTCTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPCVCFC*LSFFIK
Trigger: TTTGATGAAGAAGGACAGGCAACAGAAACAGACACA...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTTGTGTCTGTTTCTGTTaGCTGTCCTTCTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCCVCFC*LSFFIK
Trigger: TTTGATGAAGAAGGACAGGCAACAGAAACAGACACA...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCGAAACGCTCTTCATTaGTTTCTCGGCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFRNALH*FLGIAL
Trigger: GAGTGCAATGCCGAGAAAGCAATGAAGAGCGTTTCG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCGAGAATTTAGGGATTaGTTGTTTCGTGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGREFRD*LFRESP
Trigger: TGGAGACTCACGAAACAAGCAATCCCTAAATTCTCG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCTTAAGTTGCAAAATCTaGTCATTGCACTTGGACCAT +
Preference number: 4 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPLSCKI*SLHLDH
Trigger: ATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCCTTGGAAATCTTCCGACCTCCACTTATTCTaGCTCCAGGTAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QICSSSMHNPQPDPWKSSDLHLF*LQVMFL
Trigger: AAGAAACATTACCTGGAGCCAGAATAAGTGGAGGTC...GGAAGATTTCCAAGGATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCGACCTCCACTTATTCTaGCTCCAGGTAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFDLHLF*LQVMFL
Trigger: AAGAAACATTACCTGGAGCCAGAATAAGTGGAGGTC...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTTGCAGAAGTTCCTTATaGATATCATCATACACAGGG +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCCRSSL*ISSYTG
Trigger: CCCTGTGTATGATGATATCCATAAGGAACTTCTGCA...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTTTAGCAAACTTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGTTAACAATGAAAGGGATAAGGTaGCCAACAGCCTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: SLANFLDPATLQRSPMLTMKGIR*PTAFFI
Trigger: TATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCAT...TGTTAACATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATATTTTAACTGCTGTGTaGGTTTTTGAAGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHILTAV*VFEVVA
Trigger: AGCAACCACTTCAAAAACCCACACAGCAGTTAAAAT...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCATGTTGACAATTTTAACTGCTGTGTaGGTTTTTGAAGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: QNLVIALGPSSMPSSMLTILTAV*VFEVVA
Trigger: AGCAACCACTTCAAAAACCCACACAGCAGTTAAAAT...TGTCAACATGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAGACGCGTCCAGGACATaGATTACAGGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSDASRT*ITGALY
Trigger: ATACAGTGCACCTGTAATCCATGTCCTGGACGCGTC...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTATTTGGACTTCAAATTaGAGAAGTAGAGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCIWTSN*RSRGLR
Trigger: TCTCAGGCCTCTACTTCTCCAATTTGAAGTCCAAAT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAATTTGGACTTCAAATTaGAGAAGTAGAGGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPIWTSN*RSRGLR
Trigger: TCTCAGGCCTCTACTTCTCCAATTTGAAGTCCAAAT...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATTATCATATCCCAAAATaGGTCCAAGCCATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHYHIPK*VQAISQ
Trigger: TTGAGAAATGGCTTGGACCCATTTTGGGATATGATA...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCAACCTCAGCCACAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCTATCATATCCCAAAATaGGTCCAAGCCATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LNLSHRYVLPQCIILNLIYHIPK*VQAISQ
Trigger: TTGAGAAATGGCTTGGACCCATTTTGGGATATGATA...GATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTGTGGCTGAGGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCAAAAAGACGACTAAGTaGCCTCCTAGATTCCACTGT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFKKTTK*PPRFHC
Trigger: ACAGTGGAATCTAGGAGGCCACTTAGTCGTCTTTTT...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTGGCTTGTTGCTTGAGTaGTGGCACCATTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFGLLLE*WHHSSL
Trigger: TAATGAAGAATGGTGCCACCACTCAAGCAACAAGCC...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCATACAGGTGGGAGTTaGAAGCAAGATCATAACGTC +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSHTGGS*KQDHNV
Trigger: GACGTTATGATCTTGCTTCCAACTCCCACCTGTATG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCCTTTGGCCTGCTCTTaGTATGCTTCAACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFPLACS*YASTSS
Trigger: TGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTCAAACAAGGCTGCCTTaGCATTGGCAGTATCAAAAA +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAQTRLP*HWQYQK
Trigger: TTTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTG...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTGGGAAGACCTGCATTaGGATAACAGAGGACATAGG +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFWEDLH*DNRGHR
Trigger: CCTATGTCCTCTGTTATCCCAATGCAGGTCTTCCCA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCAAAAGCAGTGGCAGGTaGAACTCTAGGCTTACAATT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFKSSGR*NSRLTI
Trigger: AATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTT...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGGATGGTGTTTGGAGATaGCATCTTTGGGAGGTAATT +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGDGVWR*HLWEVI
Trigger: AATTACCTCCCAAAGATGCCATCTCCAAACACCATC...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTGTATGAAATGTGCATaGCGGTGTTACAGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSCMKCA*RCYRGK
Trigger: CTTGCCTCTGTAACACCGCCATGCACATTTCATACA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACTCCACTCATCAGTCTaGATGACTTTCTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSLHSSV*MTFFPP
Trigger: AGGAGGGAAGAAAGTCATTCAGACTGATGAGTGGAG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGCTGACTTTATAACCTaGGGTAGAAACATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCADFIT*GRNIFP
Trigger: TGGAAAAATGTTTCTACCTCAGGTTATAAAGTCAGC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp AATTATTTACTCCTTCCAGCAATCTGCCTCTTTCCATATAGAAGTTCTTTCTCTAGGAGTGATGAGTCCTaGCAGGCCAATTATATCTGC +
Preference number: 4 (lower is better)
Translates to: NYLLLPAICLFPYRSSFSRSDES*QANYIC
Trigger: GCAGATATAATTGGCCTGTCAGGACTCATCACTCCT...AGAGAAAGAACTTCTATATGGAAAGAGGCAGATTGCTGGAAGGAGTAAATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAGCCCGGAGTTTCTTTTaGCTAATCAGTGTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSARSFF*LISVFS
Trigger: GCTGAACACACTGATTAGTCAAAAGAAACTCCGGGC...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTAGGGGTACGGAAATATaGAATTATGGGAGGACGAAA +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSRGTEI*NYGRTK
Trigger: TTTCGTCCTCCCATAATTTCATATTTCCGTACCCCT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTCCTGGCTAACACAGTaGAATCCTGTCTCTACTTTT +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSSWLTQ*NPVSTF
Trigger: AAAAGTAGAGACAGGATTTCACTGTGTTAGCCAGGA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTAATGTTACCTTCTCCTaGCTATTGCCACCACCATCT +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFNVTFS*LLPPPS
Trigger: AGATGGTGGTGGCAATAGTCAGGAGAAGGTAACATT...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCGGACTTCCAGACTCCTaGACTGTAAGAAATAAACAT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFGLPDS*TVRNKH
Trigger: ATGTTTATTTCTTACAGTTCAGGAGTCTGGAAGTCC...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGGACAATACACATAGCTaGTTTATAGCAAGTATGCCA +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQDNTHS*FIASMP
Trigger: TGGCATACTTGCTATAAATCAGCTATGTGTATTGTC...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTGTGTCTGTTTCTGTTaGCTCTCCTTCCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFCVCFC*LSFLQT
Trigger: AGTCTGAAGGAAGGAGAGGCAACAGAAACAGACACA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366576.3
CDS-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCATGCCAGACTTGATTaGATGGTAAAGGAAAACCCC +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFHARLD*MVKENP
Trigger: GGGGTTTTCCTTTACCATGCAATCAAGTCTGGCATG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGAAAAGCAGGTTGACTTaGTTTGAAATCAAACGACCT +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQKSRLT*FEIKRP
Trigger: AGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTGTCACCAGGTCATTTTaGAAAGGTCAACATATGCAC +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSVTRSF*KGQHMH
Trigger: GTGCATATGTTGACCTTTGCAAAATGACCTGGTGAC...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCACCATAATCCTCTTCTaGAGAATGGCATTGATCTCA +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFTIILF*RMALIS
Trigger: TGAGATCAATGCCATTCTGCAGAAGAGGATTATGGT...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp CAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCCTTGGAAATCTTCCACCATAATCCTCTTCTaGAGAATGGCATTGATCTCA +
Preference number: 4 (lower is better)
Translates to: QICSSSMHNPQPDPWKSSTIILF*RMALIS
Trigger: TGAGATCAATGCCATTCTGCAGAAGAGGATTATGGT...GGAAGATTTCCAAGGATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp GCAGTATCAAAAATAGTTTCAATGAGTAAGATATCAACCCCGCCATCCAGAAGTTGTTTCAATGATATCTaGCCCAGCCAGCAAGTATTC +
Preference number: 4 (lower is better)
Translates to: AVSKIVSMSKISTPPSRSCFNDI*PSQQVF
Trigger: GAATACTTGCTGGCTGGGGCAGATATCATTGAAACA...ACTTCTGGATGGCGGGGTTGATATCTTACTCATTGAAACTATTTTTGATACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTGTGTCTGTTTCTGTTaGCTGTCCTTCTTCATCAAA +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFCVCFC*LSFFIK
Trigger: TTTGATGAAGAAGGACAGGCAACAGAAACAGACACA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTGTCCTTTTTCTCTTTaGCGAGTTTCTCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSCPFSL*RVSLWE
Trigger: TTCCCAGAGAGAAACTCGGCAAAGAGAAAAAGGACA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCATTAAGTTGCAAAATCTaGTCATTGCACTTGGACCAT +
Preference number: 4 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPLSCKI*SLHLDH
Trigger: ATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCAATCACAGCAAAATTaGAGGAGTCGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFQSQQN*RSRCTK
Trigger: CTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCAATCACAGCAAAATTaGAGGAGTCGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSQSQQN*RSRCTK
Trigger: CTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTGACCTCCACTTATTCTaGCTCCAGGTAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSDLHLF*LQVMFL
Trigger: AAGAAACATTACCTGGAGCCAGAATAAGTGGAGGTC...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTGCAGAAGTTCCTTATaGATATCATCATACACAGGG +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGCRSSL*ISSYTG
Trigger: CCCTGTGTATGATGATATCCATAAGGAACTTCTGCA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAGTAAGAGCTTCTCAGTaGCCTCAGGGTCTTTATTCC +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSVRASQ*PQGLYS
Trigger: GGAATAAAGACCCTGAGGCCACTGAGAAGCTCTTAC...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTATGAAAGGGATAAGGTaGCCAACAGCCTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFMKGIR*PTAFFI
Trigger: TATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCAT...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTGTGGGTTTTTGAAGTaGTTGCTCCTCCAATCAACA +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSCGFLK*LLLQST
Trigger: TGTTGATTGGAGGAGCAACCACTTCAAAAACCCACA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTGTGGGTTTTTGAAGTaGTTGCTCCTCCAATCAACA +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFCGFLK*LLLQST
Trigger: TGTTGATTGGAGGAGCAACCACTTCAAAAACCCACA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTGTTGCTTGAGTGGTaGCACCATTCTTCATTACTG +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSLLLEW*HHSSLL
Trigger: CAGTAATGAAGAATGGTGCCACCACTCAAGCAACAA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTTGTCTTCTCAAGTTGTaGATCATCTTCTCACTTCAA +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCCLLKL*IIFSLQ
Trigger: TTGAAGTGAGAAGATGATCCACAACTTGAGAAGACA...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCATACAGGTGGGAGTTaGAAGCAAGATCATAACGTC +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFHTGGS*KQDHNV
Trigger: GACGTTATGATCTTGCTTCCAACTCCCACCTGTATG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACATGCAAGAGTTTGCTaGACATACAGGTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSHARVC*TYRWEL
Trigger: CAACTCCCACCTGTATGTCCAGCAAACTCTTGCATG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTATAGTACGCCCCATGTaGTCTCTTCAAACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFIVRPM*SLQTCF
Trigger: AAAGCAAGTTTGAAGAGACCACATGGGGCGTACTAT...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACCTTTGGCCTGCTCTTaGTATGCTTCAACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSPLACS*YASTSS
Trigger: TGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCAAACAAGGCTGCCTTaGCATTGGCAGTATCAAAAA +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSQTRLP*HWQYQK
Trigger: TTTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTAAAAGCAGTGGCAGGTaGAACTCTAGGCTTACAATT +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSKSSGR*NSRLTI
Trigger: AATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAAATCATGTTGAAATaGAATCCCCAGAATGATGGT +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCQIMLK*NPQNDG
Trigger: ACCATCATTCTGGGGATTCCATTTCAACATGATTTG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 72 bp GAGATTAATATTCAGAAAGAGTTCTGTACCAGAACTTaGTACCAGTGTTTCCAACAGTGGTGTACAGCACAC +
Preference number: 4 (lower is better)
Translates to: EINIQKEFCTRT*YQCFQQWCTAH
Trigger: GTGTGCTGTACACCACTGTTGGAAACACTGGTACAAAGTTCTGGTACAGAACTCTTTCTGAATATTAATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR TCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCGTCCTTCAATTATATTaGGAGGTCGGGGATATTTTT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFVLQLY*EVGDIF
Trigger: AAAAATATCCCCGACCTCTCAATATAATTGAAGGAC...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCGCTGACTTTATAACCTaGGGTAGAAACATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFADFIT*GRNIFP
Trigger: TGGAAAAATGTTTCTACCTCAGGTTATAAAGTCAGC...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR TCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCATCTTGAAGTAGGATaGGTGTATATTTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGHLEVG*VYILHA
Trigger: TGCATGCAAAATATACACTCATCCTACTTCAAGATG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR TCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTATAGCAAGTATGCCATaGACTGAGGGTTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSIASMP*TEGFVL
Trigger: CAAAACAAAACCCTCAGTTCATGGCATACTTGCTAT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACATGCCAGACTTGATTaGATGGTAAAGGAAAACCCC +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSHARLD*MVKENP
Trigger: GGGGTTTTCCTTTACCATGCAATCAAGTCTGGCATG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCCCACTTAGATTAAAATaGCCCATTTCTCACAGTATC +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFPLRLK*PISHSI
Trigger: GATACTGTGAGAAATGGGGCATTTTAATCTAAGTGG...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR GCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGTCAGACCCAACCTTTaGAAATCTTATGGATATAAA +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCVRPNL*KSYGYK
Trigger: TTTATATCCATAAGATTTGCAAAGGTTGGGTCTGAC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTTAAAATGTCATTGTTaGCTTTCAGCGGCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFLKCHC*LSAAWH
Trigger: ATGCCAGGCCGCTGAAAGGCAACAATGACATTTTAA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAAGAAGTCCTTTGGCCTaGTCTTGGTATGCTTCAACA +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSRSPLA*SWYAST
Trigger: TGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCT...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTTAAGTTGCAAAATCTaGTCATTGCACTTGGACCAT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFLSCKI*SLHLDH
Trigger: ATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAATCACAGCAAAATTaGAGGAGTCGATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFQSQQN*RSRCTK
Trigger: CTTTGTGCATCGACTCCTCCAATTTTGCTGTGATTG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTGTTGCATGGATAAAATTAATGGCATACAAGTTGTGTTCCTCCATTCCAGTCGACCTCCACTTATTCTaGCTCCAGGTAATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FVAWIKLMAYKLCSSIPVDLHLF*LQVMFL
Trigger: AAGAAACATTACCTGGAGCCAGAATAAGTGGAGGTC...GACTGGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTAGGAGAAGGACAAGTTaGAAAGACCTCCACTTATTC +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFRRRTS*KDLHLF
Trigger: GAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCT...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTGTGGGTTTTTGAAGTaGTTGCTCCTCCAATCAACA +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFCGFLK*LLLQST
Trigger: TGTTGATTGGAGGAGCAACCACTTCAAAAACCCACA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCATTTTAACTGCTGTGTaGGTTTTTGAAGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFILTAV*VFEVVA
Trigger: AGCAACCACTTCAAAAACCCACACAGCAGTTAAAAT...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAGGCTTGTTGCTTGAGTaGTGGCACCATTCTTCATTA +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSGLLLE*WHHSSL
Trigger: TAATGAAGAATGGTGCCACCACTCAAGCAACAAGCC...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCACTTCCTCCTTCTGTaGGTAATTACTATGCTCAAT +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSHFLLL*VITMLN
Trigger: ATTGAGCATAGTAATTACCCACAGAAGGAGGAAGTG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGAAAGAAAGTATCACTTaGGCCGCATCTAATATGAAA +
Preference number: 4 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQKESIT*AASNMK
Trigger: TTTCATATTAGATGCGGCCCAAGTGATACTTTCTTT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTAAAGAAAGTATCACTTaGGCCGCATCTAATATGAAA +
Preference number: 4 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCKESIT*AASNMK
Trigger: TTTCATATTAGATGCGGCCCAAGTGATACTTTCTTT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 72 bp CCAAGATACTTTCCTGGGCGAGAATTTAGGGATTGCTaGTTTCGTGAGTCTCCAAAAGTCTATAATAATACT +
Preference number: 4 (lower is better)
Translates to: PRYFPGREFRDC*FRESPKVYNNT
Trigger: AGTATTATTATAGACTTTTGGAGACTCACGAAACAAGCAATCCCTAAATTCTCGCCCAGGAAAGTATCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR TCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCATTGCCACCACCATCTTaGAGTAGGATGAGTGTATAT +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSLPPPS*SRMSVY
Trigger: ATATACACTCATCCTACTTCAAGATGGTGGTGGCAA...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCATCTCTTCTCCTCATATaGTCCATAGATGATCCCATC +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSSLLLI*SIDDPI
Trigger: GATGGGATCATCTATGGAGCATATGAGGAGAAGAGA...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR GCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACGAGAATTTAGGGATTaGTTGTTTCGTGAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSREFRD*LFRESP
Trigger: TGGAGACTCACGAAACAAGCAATCCCTAAATTCTCG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCATGTGGGTTTTTGAAGTaGTTGCTCCTCCAATCAACA +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSCGFLK*LLLQST
Trigger: TGTTGATTGGAGGAGCAACCACTTCAAAAACCCACA...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTATTCATGAACAAAGATaGTTCTTCATTTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAIHEQR*FFICSS
Trigger: GGAGGAACAAATGAAGAACCATCTTTGTTCATGAAT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGATTCATGAACAAAGATaGTTCTTCATTTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGIHEQR*FFICSS
Trigger: GGAGGAACAAATGAAGAACCATCTTTGTTCATGAAT...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CCA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTGTCTTCTCAAGTTGTaGATCATCTTCTCACTTCAA +
Preference number: 4 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFCLLKL*IIFSLQ
Trigger: TTGAAGTGAGAAGATGATCCACAACTTGAGAAGACA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCACTTCCTCCTTCTGTaGGTAATTACTATGCTCAAT +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFHFLLL*VITMLN
Trigger: ATTGAGCATAGTAATTACCCACAGAAGGAGGAAGTG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTAAGCTAACCAGTTTGTaGTATTTTGTTACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSKLTSL*YFVTGA
Trigger: TGCTCCTGTAACAAAATACCACAAACTGGTTAGCTT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAGATGGTGTTTGGAGATaGCATCTTTGGGAGGTAATT +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSDGVWR*HLWEVI
Trigger: AATTACCTCCCAAAGATGCCATCTCCAAACACCATC...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
3UTR CAA 72 bp ACTTTTGTTGCATGGATAAAATTAATGGCATACAAGTaGTGTTCCTCCATTCCAGTCCCAATGGTTAGGATA +
Preference number: 4 (lower is better)
Translates to: TFVAWIKLMAYK*CSSIPVPMVRI
Trigger: TATCCTAACCATTGGGACTGGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR TCA 90 bp GACTTTTGTTGCATGGATAAAATTAATGGCATACAAGTTGTGTTCCTCCATTCCGCTGACTTTATAACCTaGGGTAGAAACATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: DFCCMDKINGIQVVFLHSADFIT*GRNIFP
Trigger: TGGAAAAATGTTTCTACCTCAGGTTATAAAGTCAGC...GGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CCA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTATCATATCCCAAAATaGGTCCAAGCCATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFYHIPK*VQAISQ
Trigger: TTGAGAAATGGCTTGGACCCATTTTGGGATATGATA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CCA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAATTTTAACTGCTGTGTaGGTTTTTGAAGTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSILTAV*VFEVVA
Trigger: AGCAACCACTTCAAAAACCCACACAGCAGTTAAAAT...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS TCA 90 bp CTCCTTGCGCAGAGGGCGCGGCAGAGAAGACGTGCTCTCCACAGGTaGCGACGGCCAAGGGCCACGCCAGCCAGCGCCAGGCGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LLAQRARQRRRALHR*RRPRATPASARRAC
Trigger: GCAGGCTCGCCTGGCGCTGGCTGGCGTGGCCCTTGGCCGTCGTCACCTGTGGAGAGCACGTCTTCTCTGCCGCGCCCTCTGCGCAAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS GCA 90 bp AGCCCGCAGCGCCCTAGGGCCTCTCTCGGGGCTGGGCGCGGCAACTaGTGGAGCACGTGCTTTCTTCCCGGGTACCCGGCCAGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SPQRPRASLGAGRGN*WSTCFLPGYPASPW
Trigger: CCAAGGACTGGCCGGGTACCCGGGAAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCCAGCCCCGAGAGAGGCCCTAGGGCGCTGCGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS CCA 90 bp CCGCAGCGCCCTAGGGCCTCTCTCGGGGCTGGGCGCGGCAACTGCTaGAGCACGTGCTTTCTTCCCGGGTACCCGGCCAGTCCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: PQRPRASLGAGRGNC*STCFLPGYPASPWC
Trigger: ACACCAAGGACTGGCCGGGTACCCGGGAAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCCAGCCCCGAGAGAGGCCCTAGGGCGCTGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS GCA 90 bp CCTAGGGCCTCTCTCGGGGCTGGGCGCGGCAACTGCTGGAGCACGTaGTTTCTTCCCGGGTACCCGGCCAGTCCTTGGTGTCGGCCTAGC +
Preference number: 5 (lower is better)
Translates to: PRASLGAGRGNCWST*FLPGYPASPWCRPS
Trigger: GCTAGGCCGACACCAAGGACTGGCCGGGTACCCGGGAAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCCAGCCCCGAGAGAGGCCCTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS GCA 90 bp GTTGTCGAGTCTCCTCCTTGCGCAGAGGGCGCGGCAGAGAAGACGTaGTCTCCACAGGTGACGACGGCCAAGGGCCACGCCAGCCAGCGC +
Preference number: 5 (lower is better)
Translates to: VVESPPCAEGAAEKT*SPQVTTAKGHASQR
Trigger: GCGCTGGCTGGCGTGGCCCTTGGCCGTCGTCACCTGTGGAGAGCACGTCTTCTCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS GCA 90 bp CCCTACTGCCTGGCCTCTGTCCTCAGCCCCTCGGCGCAATGCCTCTaGCTTACCTCTGCCAGCCGGTCCCCCAGCGCCTTGACCATGATG +
Preference number: 5 (lower is better)
Translates to: PYCLASVLSPSAQCL*LTSASRSPSALTMM
Trigger: CATCATGGTCAAGGCGCTGGGGGACCGGCTGGCAGAGGTAAGGCAGAGGCATTGCGCCGAGGGGCTGAGGACAGAGGCCAGGCAGTAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 90 bp TTGGGGTCAGCGATGCCCAGGCCATGTGCTGCCTGCCATGTGGGGTaGGGTCAAGGGTCATACAGGAGCCGGCTGAGGACACCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LGSAMPRPCAACHVG*GQGSYRSRLRTPRA
Trigger: AGCCCTGGGTGTCCTCAGCCGGCTCCTGTATGACCCTTGACCCCACCCCACATGGCAGGCAGCACATGGCCTGGGCATCGCTGACCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS TCA 90 bp CCAGCCAGCAAGTATTCCGGGTTGCGACAGGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCTCCTTGCGCAGAGGGCGCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PASKYSGLRQVLERG*HVVESPPCAEGAAE
Trigger: CTCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGGAATACTTGCTGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652435.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCCAAGGCCCGGGTCTTTaGACGCCTCCCGTTGGCTCG +
Preference number: 5 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSQGPGL*TPPVGS
Trigger: CGAGCCAACGGGAGGCGTCAAAAGACCCGGGCCTTG...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS TCA 90 bp CAGGGTTTTCTTCAGACCGGGTTGCGACAGGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCTCCTTGCGCAGAGGGCGCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: QGFLQTGLRQVLERG*HVVESPPCAEGAAE
Trigger: CTCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGGTCTGAAGAAAACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679569.1
CDS TCA 90 bp GGTTTTCTTCAGACCTTCGGGTTGCGACAGGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCTCCTTGCGCAGAGGGCGCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GFLQTFGLRQVLERG*HVVESPPCAEGAAE
Trigger: CTCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAAGAAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000650888.1
ENST00000680454.1
CDS-3UTR CAA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACGCCGGGCGGATGCCCTaGTACCGCAGCCTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYAGRMP*YRSLRR
Trigger: CCTGCGCAGGCTGCGGTACAAGGGCATCCGCCCGGC...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS GCA 90 bp CATGGAGCTCTTCTGCAAAGGCCTTGGGACCCAAAGCAGCAGGCATaGTTAGGCAGACGCAGGGGCTCACAGCATCAGTGCAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: HGALLQRPWDPKQQA*LGRRRGSQHQCSLH
Trigger: GTGGAGGCTGCACTGATGCTGTGAGCCCCTGCGTCTGCCTAAGCATGCCTGCTGCTTTGGGTCCCAAGGCCTTTGCAGAAGAGCTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS-3UTR CAA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTGTGAGCGCATGCCTTTaGCCAAAGGGAGTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTVSACL*PKGVLQ
Trigger: CTGCAGAACTCCCTTTGGCAAAAGGCATGCGCTCAC...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTGTCGAGTCTCCTCCTaGCGCAGAGGGCGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMCRVSS*RRGRGR
Trigger: TCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS CCA 90 bp GACACCCATGGTGGCGCCTTCTCTCCCTCGTCCTCACAGATGGCTTaGGCTTGGGCGTGTGACTGGTCACTTCTTGGGCATGTGATTGGT +
Preference number: 5 (lower is better)
Translates to: DTHGGAFSPSSSQMA*AWACDWSLLGHVIG
Trigger: ACCAATCACATGCCCAAGAAGTGACCAGTCACACGCCCAAGCCCAAGCCATCTGTGAGGACGAGGGAGAGAAGGCGCCACCATGGGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS-3UTR CAA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATGTCGAGTCTCCTCCTaGCGCAGAGGGCGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVCRVSS*RRGRGR
Trigger: TCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACA...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGGGAAGCTTTCCTGACTaGGGTGGAACCGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMGSFPD*GGTGVG
Trigger: CCCCACCCCGGTTCCACCCAAGTCAGGAAAGCTTCC...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS TCA 90 bp CGCCTTCTCTCCCTCGTCCTCACAGATGGCTTGGGCTTGGGCGTGTaGCTGGTCACTTCTTGGGCATGTGATTGGTCATTTGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RLLSLVLTDGLGLGV*LVTSWACDWSFGRR
Trigger: CCTCCTCCCAAATGACCAATCACATGCCCAAGAAGTGACCAGTCACACGCCCAAGCCCAAGCCATCTGTGAGGACGAGGGAGAGAAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS TCA 90 bp TTCACATCTGCCCCTGGGCCTGCGAAAGACCCAGGCCACCTCAGGTaGCAGTACCACCCAGGCAGGTTTCCACAGAACTTCCTTCAAGGA +
Preference number: 5 (lower is better)
Translates to: FTSAPGPAKDPGHLR*QYHPGRFPQNFLQG
Trigger: TCCTTGAAGGAAGTTCTGTGGAAACCTGCCTGGGTGGTACTGTCACCTGAGGTGGCCTGGGTCTTTCGCAGGCCCAGGGGCAGATGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 90 bp GTGGGGTCAAGGGTCATACAGGAGCCGGCTGAGGACACCCAGGGCTaGCTGGGCACCAAACCAAGAATTCAGCAGGATTTGCTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: VGSRVIQEPAEDTQG*LGTKPRIQQDLLLD
Trigger: ATCCAGAAGCAAATCCTGCTGAATTCTTGGTTTGGTGCCCAGCCAGCCCTGGGTGTCCTCAGCCGGCTCCTGTATGACCCTTGACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS-3UTR CAA 90 bp CAAATCCCTCTCCTGTCTGTCCGGAAAGAGTCCGCCCACTTTTATCAACGATCGTGTCGAGTCTCCTCCTaGCGCAGAGGGCGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: QIPLLSVRKESAHFYQRSCRVSS*RRGRGR
Trigger: TCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACA...CGATCGTTGATAAAAGTGGGCGGACTCTTTCCGGACAGACAGGAGAGGGATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS TCA 90 bp GAACACAATATTAAACGCCTCACTCCTGCTGAGTGGTCCTGCCTCTaGCACCCATGGTGGCGCCTTCTCTCCCTCGTCCTCACAGATGGC +
Preference number: 5 (lower is better)
Translates to: EHNIKRLTPAEWSCL*HPWWRLLSLVLTDG
Trigger: GCCATCTGTGAGGACGAGGGAGAGAAGGCGCCACCATGGGTGTCAGAGGCAGGACCACTCAGCAGGAGTGAGGCGTTTAATATTGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS GCA 90 bp AAGAGCAGCTGGGACCATACAGCTGCTAGTTCCTCCACTGTTCACTaGAGGAAAAGGGAGAGGCTCTCCCCAGGGCAAAGGCTACTACCC +
Preference number: 5 (lower is better)
Translates to: KSSWDHTAASSSTVH*RKRERLSPGQRLLP
Trigger: GGGTAGTAGCCTTTGCCCTGGGGAGAGCCTCTCCCTTTTCCTGCAGTGAACAGTGGAGGAACTAGCAGCTGTATGGTCCCAGCTGCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 90 bp GCTGTCAGTACACCTTCCATACCTGTTGCCTTAACCCATAGAAGGTaGCTATGGGCTCTGCAGCCTGGGGCACAGCAGCCTCTGCGTACA +
Preference number: 5 (lower is better)
Translates to: AVSTPSIPVALTHRR*LWALQPGAQQPLRT
Trigger: TGTACGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATGGGTTAAGGCAACAGGTATGGAAGGTGTACTGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 90 bp CATGGTGGCGCCTTCTCTCCCTCGTCCTCACAGATGGCTTGGGCTTaGGCGTGTGACTGGTCACTTCTTGGGCATGTGATTGGTCATTTG +
Preference number: 5 (lower is better)
Translates to: HGGAFSPSSSQMAWA*ACDWSLLGHVIGHL
Trigger: CAAATGACCAATCACATGCCCAAGAAGTGACCAGTCACACGCCCAAGCCCAAGCCATCTGTGAGGACGAGGGAGAGAAGGCGCCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 90 bp TTGATCAACTGGCCCAAGGTCAGACAGTGGGAGGGGCCAGGGGGCTaGTACCACAACCCATGCGTCTACATATATGGTACTGCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: LINWPKVRQWEGPGG*YHNPCVYIYGTAQD
Trigger: GTCCTGAGCAGTACCATATATGTAGACGCATGGGTTGTGGTACCAGCCCCCTGGCCCCTCCCACTGTCTGACCTTGGGCCAGTTGATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 90 bp GACCTGGGTCCCAATAAACGTGGGCTTCACTACAGGAGAGAAGTATaGTTGTCAATGCTGACGCTGGCACCCTGCCTGATGGAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: DLGPNKRGLHYRREV*LSMLTLAPCLMEAS
Trigger: GGAGGCCTCCATCAGGCAGGGTGCCAGCGTCAGCATTGACAACCATACTTCTCTCCTGTAGTGAAGCCCACGTTTATTGGGACCCAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS-3UTR CAA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCGGAAAACCCCATGCATaGCTTCTCGAATGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSGKPHA*LLEWLP
Trigger: TGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCC...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGTGTCGAGTCTCCTCCTaGCGCAGAGGGCGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: HALLLEWLPFLGRRRTSWCRVSS*RRGRGR
Trigger: TCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACA...CCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTTCGAAACGCTCTTCATaGCTTTCTCGGCATTGCACT +
Preference number: 5 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTSKRSS*LSRHCT
Trigger: AGTGCAATGCCGAGAAAGCAATGAAGAGCGTTTCGA...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS TCA 90 bp ACCCAAGAGAAAACCGGCAGAGGAGGACGACGTGACATCCGGCTCTaGGCCCCGCAGACATTTAGAACCTTTCAGAGCGCGGTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: TQEKTGRGGRRDIRL*APQTFRTFQSAVSS
Trigger: AGAACTAACCGCGCTCTGAAAGGTTCTAAATGTCTGCGGGGCTCAGAGCCGGATGTCACGTCGTCCTCCTCTGCCGGTTTTCTCTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000674797.2
ENST00000680454.1
CDS GCA 90 bp ACCCTTGATTCAAGCGTCCTCCCGCCTGGGAAGGCAGAGAGAACATaGTGCTGCAGAGCCACTGATGGACTCTCTCGTCTCCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: TLDSSVLPPGKAERT*CCRATDGLSRLPEF
Trigger: AAATTCTGGGAGACGAGAGAGTCCATCAGTGGCTCTGCAGCAGCATGTTCTCTCTGCCTTCCCAGGCGGGAGGACGCTTGAATCAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 90 bp AGTACACCTTCCATACCTGTTGCCTTAACCCATAGAAGGTGGCTATaGGCTCTGCAGCCTGGGGCACAGCAGCCTCTGCGTACAGGTGAA +
Preference number: 5 (lower is better)
Translates to: STPSIPVALTHRRWL*ALQPGAQQPLRTGE
Trigger: TTCACCTGTACGCAGAGGCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATGGGTTAAGGCAACAGGTATGGAAGGTGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 90 bp GGTCAAGGGTCATACAGGAGCCGGCTGAGGACACCCAGGGCTGGCTaGGCACCAAACCAAGAATTCAGCAGGATTTGCTTCTGGATTTTC +
Preference number: 5 (lower is better)
Translates to: GQGSYRSRLRTPRAG*APNQEFSRICFWIF
Trigger: GAAAATCCAGAAGCAAATCCTGCTGAATTCTTGGTTTGGTGCCCAGCCAGCCCTGGGTGTCCTCAGCCGGCTCCTGTATGACCCTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 90 bp CCCCACTGGCAGGTTGATGTTCCTATAATCCGGCCTTTCCACAGATaGGGACACAGAGAGTGTCTTATTAGTCGGACCCAGAGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: PHWQVDVPIIRPFHR*GHRECLISRTQSPC
Trigger: GCAGGGGCTCTGGGTCCGACTAATAAGACACTCTCTGTGTCCCCATCTGTGGAAAGGCCGGATTATAGGAACATCAACCTGCCAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS CCA 90 bp CAAGCTGCTCAAGGTCACTCCGTGAGTCAGAGTCAGGAGCCACGTTaGGATGAGAACCCCGAGCTCCAGGCTCCCAATATGGCATTCTTT +
Preference number: 5 (lower is better)
Translates to: QAAQGHSVSQSQEPR*DENPELQAPNMAFF
Trigger: AAAGAATGCCATATTGGGAGCCTGGAGCTCGGGGTTCTCATCCCAACGTGGCTCCTGACTCTGACTCACGGAGTGACCTTGAGCAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS-3UTR CAA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGGCCGGGCGGATGCCCTaGTACCGCAGCCTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQAGRMP*YRSLRR
Trigger: CCTGCGCAGGCTGCGGTACAAGGGCATCCGCCCGGC...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGCTCCAGGCTTCAGACCTTCGGGTaGCGACAGGTCTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: SSEGEGQVGKTSTYSGSRLQTFG*RQVLER
Trigger: GCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAAG...CCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCGCAAACAAGGCTGCCTaGGCATTGGCAGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSANKAA*ALAVSK
Trigger: TTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTGC...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS TCA 90 bp GTAAAAACTGTCAAACGTGGAAGCAAGCTGCTCAAGGTCACTCCGTaGGTCAGAGTCAGGAGCCACGTTGGGATGAGAACCCCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: VKTVKRGSKLLKVTP*VRVRSHVGMRTPSS
Trigger: GGAGCTCGGGGTTCTCATCCCAACGTGGCTCCTGACTCTGACTCACGGAGTGACCTTGAGCAGCTTGCTTCCACGTTTGACAGTTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS TCA 90 bp TCTGCCCTCCAGACTGTAGTGTGGTCTGCACCTCAGACTCTGGTCTaGCATGGCAGGATTAGGCTGGAGTCTAAGGTGTTGGCTCCATTG +
Preference number: 5 (lower is better)
Translates to: SALQTVVWSAPQTLV*HGRIRLESKVLAPL
Trigger: CAATGGAGCCAACACCTTAGACTCCAGCCTAATCCTGCCATGTCAGACCAGAGTCTGAGGTGCAGACCACACTACAGTCTGGAGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS GCA 90 bp TCCTGTCTGGAGAGTTACCTCCTCGGCAGCTTTTCTGGCCACTCCTaGAGAGCACATGTTCATCCGGTAGGCCAAGTGTTCAAGGCCATA +
Preference number: 5 (lower is better)
Translates to: SCLESYLLGSFSGHS*RAHVHPVGQVFKAI
Trigger: TATGGCCTTGAACACTTGGCCTACCGGATGAACATGTGCTCTGCAGGAGTGGCCAGAAAAGCTGCCGAGGAGGTAACTCTCCAGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
CDS CCA 90 bp TTCTCTCCCTCGTCCTCACAGATGGCTTGGGCTTGGGCGTGTGACTaGTCACTTCTTGGGCATGTGATTGGTCATTTGGGAGGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: FSPSSSQMAWAWACD*SLLGHVIGHLGGGE
Trigger: TTCACCTCCTCCCAAATGACCAATCACATGCCCAAGAAGTGACCAGTCACACGCCCAAGCCCAAGCCATCTGTGAGGACGAGGGAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS-3UTR CAA 90 bp CACTGCCACAGTAGGCCCACAGTTCTCGGCGAACTCTTTCATGGAGCTCTTCTGTGCACAAAGGTACCTTaGCGATGTCTGGCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: HCHSRPTVLGELFHGALLCTKVP*RCLARK
Trigger: CTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCA...CAGAAGAGCTCCATGAAAGAGTTCGCCGAGAACTGTGGGCCTACTGTGGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTGCACAAAGGTACCTTaGCGATGTCTGGCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMCTKVP*RCLARK
Trigger: CTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTTTAATGGCATACAAGTaGTGTTCCTCCATTCCAGTC +
Preference number: 5 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTLMAYK*CSSIPV
Trigger: GACTGGAATGGAGGAACACAACTTGTATGCCATTAA...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCGGGTTTTTGAAGTGGTaGCTCCTCCAATCAACAATG +
Preference number: 5 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSGFLKW*LLQSTM
Trigger: CATTGTTGATTGGAGGAGCAACCACTTCAAAAACCC...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTCCTCGATTCGGGTACTaGCCCCGGAGCTGCCAGACA +
Preference number: 5 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFPRFGY*PRSCQT
Trigger: TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGG...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGGCCGGGCGGATGCCCTaGTACCGCAGCCTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGAGRMP*YRSLRR
Trigger: CCTGCGCAGGCTGCGGTACAAGGGCATCCGCCCGGC...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCGCCGGGCGGATGCCCTaGTACCGCAGCCTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFAGRMP*YRSLRR
Trigger: CCTGCGCAGGCTGCGGTACAAGGGCATCCGCCCGGC...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGAGAAAGCATGGCTGCTaGACCACACTGGGGCAAATG +
Preference number: 5 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMRKHGC*TTLGQM
Trigger: CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCT...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAAGCGCGGGTGACATGTaGTCGAGTCTCCTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: RHPEVLWPALGMLQQAHQSAGDM*SSLLLA
Trigger: CGCAAGGAGGAGACTCGACAACATGTCACCCGCGCT...TTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CAA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCCCAATGTTAACAAAGTaGGTGTACGGTCCAATCCTG +
Preference number: 5 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSPMLTK*VYGPIL
Trigger: CAGGATTGGACCGTACACCAACTTTGTTAACATTGG...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAACAGACATGGAAGGCTTaGCATGCCTCTAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQQTWKA*HASKGL
Trigger: CAGCCCCTTAGAGGCATGCAAAGCCTTCCATGTCTG...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS TCA 90 bp ACTGCCACCAGAATGTTCCAGAGTGCACTGGAGGAAAGCCCCTCCTaGGAAATTGCTACCTGGGTAGGTAATGTATGTGCCTGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: TATRMFQSALEESPS*EIATWVGNVCAWPS
Trigger: ACTGGGCCAGGCACATACATTACCTACCCAGGTAGCAATTTCTCAGGAGGGGCTTTCCTCCAGTGCACTCTGGAACATTCTGGTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS GCA 90 bp GATTCAAGCGTCCTCCCGCCTGGGAAGGCAGAGAGAACATGCTGCTaGAGAGCCACTGATGGACTCTCTCGTCTCCCAGAATTTAAGAAA +
Preference number: 5 (lower is better)
Translates to: DSSVLPPGKAERTCC*RATDGLSRLPEFKK
Trigger: TTTCTTAAATTCTGGGAGACGAGAGAGTCCATCAGTGGCTCTGCAGCAGCATGTTCTCTCTGCCTTCCCAGGCGGGAGGACGCTTGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 90 bp AGGAGCCACGTTGGGATGAGAACCCCGAGCTCCAGGCTCCCAATATaGCATTCTTTCCACCAAACCACGCTGAACTCAGCAAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: RSHVGMRTPSSRLPI*HSFHQTTLNSARMK
Trigger: TTTCATCCTTGCTGAGTTCAGCGTGGTTTGGTGGAAAGAATGCCATATTGGGAGCCTGGAGCTCGGGGTTCTCATCCCAACGTGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 90 bp AGACTCTGGTCTGACATGGCAGGATTAGGCTGGAGTCTAAGGTGTTaGCTCCATTGCCGTATCCGAGCCTTCCTGTCTCTCTACTTCCTG +
Preference number: 5 (lower is better)
Translates to: RLWSDMAGLGWSLRC*LHCRIRAFLSLYFL
Trigger: CAGGAAGTAGAGAGACAGGAAGGCTCGGATACGGCAATGGAGCCAACACCTTAGACTCCAGCCTAATCCTGCCATGTCAGACCAGAGTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS-3UTR CAA 90 bp GGCATGAACCCAGGAGGCGGAGCTTGCTATGAGCCGAGATTGCGCCCCTGCACTTCGGAAGCAATTAAGTaGCAAAATCTGGTCATTGCA +
Preference number: 5 (lower is better)
Translates to: GMNPGGGACYEPRLRPCTSEAIK*QNLVIA
Trigger: TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGA...AGTGCAGGGGCGCAATCTCGGCTCATAGCAAGCTCCGCCTCCTGGGTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATGCACAAAGGTACCTTaGCGATGTCTGGCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVCTKVP*RCLARK
Trigger: CTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCA...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGGGAAAACCCCATGCATaGCTTCTCGAATGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMGKPHA*LLEWLP
Trigger: TGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCC...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CACTGCCACAGTAGGCCCACAGTTCTCGGCGAACTCTTTCATGGAGCTCTTCTGACTCCAACTATGTTCTaGCCTATGTCGTGCACGTCG +
Preference number: 5 (lower is better)
Translates to: HCHSRPTVLGELFHGALLTPTMF*PMSCTS
Trigger: CGACGTGCACGACATAGGCAAGAACATAGTTGGAGT...CAGAAGAGCTCCATGAAAGAGTTCGCCGAGAACTGTGGGCCTACTGTGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp GAGTCGATGCACAAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCACACCACCACACTCTaGGACGCGTCCAGGACATGG +
Preference number: 5 (lower is better)
Translates to: ESMHKGTFAMSGSEAIKLHTTTL*DASRTW
Trigger: CCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGTG...CAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCATCGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTGCCGGGCGGATGCCCTaGTACCGCAGCCTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFAGRMP*YRSLRR
Trigger: CCTGCGCAGGCTGCGGTACAAGGGCATCCGCCCGGC...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTGCCGGGCGGATGCCCTaGTACCGCAGCCTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSAGRMP*YRSLRR
Trigger: CCTGCGCAGGCTGCGGTACAAGGGCATCCGCCCGGC...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTACCTTTATGCTGCCCACTaGTCCAACTCCGCACGGGAT +
Preference number: 5 (lower is better)
Translates to: DAAVVVTIILIGLAQLFYLYAAH*SNSARD
Trigger: ATCCCGTGCGGAGTTGGACAAGTGGGCAGCATAAAG...GTAGAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CAA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCTGTCACCAGGTCATTTaGCAAAGGTCAACATATGCA +
Preference number: 5 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSCHQVI*QRSTYA
Trigger: TGCATATGTTGACCTTTGCAAAATGACCTGGTGACA...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp AAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCTGTCGAGTCTCCTCCTaGCGCAGAGGGCGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: KGTFAMSGSEAIKLQNLVCRVSS*RRGRGR
Trigger: TCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACA...GACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTCTTCAGACCTTCGGGTaGCGACAGGTCTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFLQTFG*RQVLER
Trigger: GCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAAG...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366577.10
CDS TCA 90 bp AGATGGCTTGGGCTTGGGCGTGTGACTGGTCACTTCTTGGGCATGTaGTTGGTCATTTGGGAGGAGGTGAAGCAGACCCTCATTTATGCA +
Preference number: 5 (lower is better)
Translates to: RWLGLGRVTGHFLGM*LVIWEEVKQTLIYA
Trigger: TGCATAAATGAGGGTCTGCTTCACCTCCTCCCAAATGACCAATCACATGCCCAAGAAGTGACCAGTCACACGCCCAAGCCCAAGCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS GCA 90 bp TGGATCATGGTCCCCATCCCTCCATCCAGCACCATAATCCTCTTCTaGAGAATGGCATTGATCTCATCCCGCAGGGTTTTCTTCAGACCG +
Preference number: 5 (lower is better)
Translates to: WIMVPIPPSSTIILF*RMALISSRRVFFRP
Trigger: CGGTCTGAAGAAAACCCTGCGGGATGAGATCAATGCCATTCTGCAGAAGAGGATTATGGTGCTGGATGGAGGGATGGGGACCATGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679569.1
CDS CCA 90 bp TTCCCTAAAGGTCAATCCAAAGCTCCACGGGCCAGAAAGAGCAGCTaGGACCATACAGCTGCTAGTTCCTCCACTGTTCACTGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: FPKGQSKAPRARKSS*DHTAASSSTVHCRK
Trigger: TTTCCTGCAGTGAACAGTGGAGGAACTAGCAGCTGTATGGTCCCAGCTGCTCTTTCTGGCCCGTGGAGCTTTGGATTGACCTTTAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 90 bp CTTGGACCATCTAGCATGCCATCATCCATGTTGACATCCAACACCTaGGCTCCCATTTCCACCTGCACTTTGGCAACACACAAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LGPSSMPSSMLTSNT*APISTCTLATHKAS
Trigger: GGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAACATGGATGATGGCATGCTAGATGGTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651455.1
CDS-3UTR CAA 90 bp CTCAACCTCAGCCACAGATATGTTCTTCCTCAATGCATAATCCTCAACCTGATCCCTCGATTCGGGTACTaGCCCCGGAGCTGCCAGACA +
Preference number: 5 (lower is better)
Translates to: LNLSHRYVLPQCIILNLIPRFGY*PRSCQT
Trigger: TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGG...GATCAGGTTGAGGATTATGCATTGAGGAAGAACATATCTGTGGCTGAGGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATCCTCGATTCGGGTACTaGCCCCGGAGCTGCCAGACA +
Preference number: 5 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHPRFGY*PRSCQT
Trigger: TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGG...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp GGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTATCTGGGCACTGCTGGCAGCTCTCCACCTACTGTTTaGTCGTTAAATATCTTGGGA +
Preference number: 5 (lower is better)
Translates to: GPAIHSFPKAWYLGTAGSSPPTV*SLNILG
Trigger: TCCCAAGATATTTAACGACAAAACAGTAGGTGGAGA...GCTGCCAGCAGTGCCCAGATACCAGGCTTTGGGGAATGAGTGGATGGCTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCCAGGTGAATGTCGTCTaGGATACTCTGTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: HDAAVVVTIILIGLAQLFQVNVV*DTLCWP
Trigger: TGGCCAGCACAGAGTATCCAAGACGACATTCACCTG...GAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCAAGGCCCGGGTCTTTaGACGCCTCCCGTTGGCTCG +
Preference number: 5 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQQGPGL*TPPVGS
Trigger: CGAGCCAACGGGAGGCGTCAAAAGACCCGGGCCTTG...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp ATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGAAGCGCGGGTGACATGTaGTCGAGTCTCCTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: IASRMASIPRKEKDKLERSAGDM*SSLLLA
Trigger: CGCAAGGAGGAGACTCGACAACATGTCACCCGCGCT...TCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGATCTGGTCATTGCACTaGGACCATCTAGCATGCCAT +
Preference number: 5 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMIWSLH*DHLACH
Trigger: ATGGCATGCTAGATGGTCCAAGTGCAATGACCAGAT...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACCCGGCAGCCTGTGTaGCAGATGAATCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFTRQPV*QMNPEE
Trigger: CTCCTCTGGATTCATCTGCAACACAGGCTGCCGGGT...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAATGCGTAGCAAGTATTCCGGGTaGCGACAGGTCTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: PEVLWPALGMLQQAHQMRSKYSG*RQVLER
Trigger: GCGCTCCAAGACCTGTCGCAACCCGGAATACTTGCT...ACGCATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS GCA 90 bp TGGATCATGGTCCCCATCCCTCCATCCAGCACCATAATCCTCTTCTaGAGAATGGCATTGATCTCATCCCGCAGGGTTTTCTTCAGACCT +
Preference number: 5 (lower is better)
Translates to: WIMVPIPPSSTIILF*RMALISSRRVFFRP
Trigger: AGGTCTGAAGAAAACCCTGCGGGATGAGATCAATGCCATTCTGCAGAAGAGGATTATGGTGCTGGATGGAGGGATGGGGACCATGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
CDS GCA 90 bp ACACACCACCACACTCTTGGACGCGTCCAGGACATGGATTACAGGTaGACTGTATCTCGGAGCTATTTTAACTGCTGTGTGGGTTCGGAA +
Preference number: 5 (lower is better)
Translates to: THHHTLGRVQDMDYR*TVSRSYFNCCVGSE
Trigger: TTCCGAACCCACACAGCAGTTAAAATAGCTCCGAGATACAGTGCACCTGTAATCCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679842.1
CDS-3UTR CAA 90 bp CATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGTGCACAAAGGTACCTTaGCGATGTCTGGCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: HALLLEWLPFLGRRRTSWCTKVP*RCLARK
Trigger: CTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCA...CCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TTGACATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTGGCAACACACAAGGGAAAACCCCATGCATaGCTTCTCGAATGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LTSNTWAPISTCTLATHKGKPHA*LLEWLP
Trigger: TGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCC...CTTGTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGCACACCACCACACTCTaGGACGCGTCCAGGACATGG +
Preference number: 5 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWHTTTL*DASRTW
Trigger: CCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGTG...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp GAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACACCACCACACTCTaGGACGCGTCCAGGACATGG +
Preference number: 5 (lower is better)
Translates to: ELQKFLMDIIIHREVSSIHTTTL*DASRTW
Trigger: CCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGTG...AATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCTCGATTCGGGTACTaGCCCCGGAGCTGCCAGACA +
Preference number: 5 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQPRFGY*PRSCQT
Trigger: TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGG...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGTTGTCGTTAAATATCTaGGGAAAGCCTCGATTCGGG +
Preference number: 5 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMLSLNI*GKPRFG
Trigger: CCCGAATCGAGGCTTTCCCAAGATATTTAACGACAA...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GAGCTGCAGAAGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTAGCGCGGGTGACATGTaGTCGAGTCTCCTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: ELQKFLMDIIIHREVSSISAGDM*SSLLLA
Trigger: CGCAAGGAGGAGACTCGACAACATGTCACCCGCGCT...AATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACTTCTGCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCAGCGCGGGTGACATGTaGTCGAGTCTCCTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPISAGDM*SSLLLA
Trigger: CGCAAGGAGGAGACTCGACAACATGTCACCCGCGCT...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp ACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCACTTCAGACCTTCGGGTaGCGACAGGTCTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: TFAMSGSEAIKLQNLVIALQTFG*RQVLER
Trigger: GCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAAG...TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp AGTTCCTTATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCCTTCAGACCTTCGGGTaGCGACAGGTCTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: SSLWISSYTGRFPAFTIPLQTFG*RQVLER
Trigger: GCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAAG...GGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATAAGGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TTAAATATCTTGGGAAAGCCTCGATTCGGGTACTTGCCCCGGAGCTGCCAGACATTCTGCAGAATGGCATaGATCTCATCCCGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: LNILGKPRFGYLPRSCQTFCRMA*ISSRRV
Trigger: AACCCTGCGGGATGAGATCAATGCCATTCTGCAGAA...TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGGCTTTCCCAAGATATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGCTCCAGGAAGGCCATAGTCAGCTaGGGCAATACTAGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSEGEGQVGKTSTYSGSRKAIVS*GNTSAA
Trigger: AGCAGCACTAGTATTGCCCAAGCTGACTATGGCCTT...CCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp GTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGTTCAGAAAGGCCATAGTCAGCTaGGGCAATACTAGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: VFKDLGPNKRGLHWVRFRKAIVS*GNTSAA
Trigger: AGCAGCACTAGTATTGCCCAAGCTGACTATGGCCTT...TCTGAACCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TTGACATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTGGCAACACACAAGTCCTTTGGCCTGCTCTaGGTATGCTTCAACAAGCTC +
Preference number: 5 (lower is better)
Translates to: LTSNTWAPISTCTLATHKSFGLL*VCFNKL
Trigger: GAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA...CTTGTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp TCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGCTCCAGGTCCTTTGGCCTGCTCTaGGTATGCTTCAACAAGCTC +
Preference number: 5 (lower is better)
Translates to: SSEGEGQVGKTSTYSGSRSFGLL*VCFNKL
Trigger: GAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA...CCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGAAATCCTTTAGGTGCTaGGCCATCATAGAAGGCGTT +
Preference number: 5 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMKSFRC*AIIEGV
Trigger: AACGCCTTCTATGATGGCCAAGCACCTAAAGGATTT...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAAATTTCCACCTGCACTTaGGCAACACACAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQISTCT*ATHKAS
Trigger: AGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAAT...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGGGAAGCTTTCCTGACTaGGGTGGAACCGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQGSFPD*GGTGVG
Trigger: CCCCACCCCGGTTCCACCCAAGTCAGGAAAGCTTCC...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS TCA 90 bp CCCATGTCCATTATGGAGTTGTCTGAAGGACTCAGAGAGCTGCTATaGGTCCATCTCAGGATGGTATCTGGCACACAACACCTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: PMSIMELSEGLRELL*VHLRMVSGTQHLLH
Trigger: ATGGAGCAGGTGTTGTGTGCCAGATACCATCCTGAGATGGACTCATAGCAGCTCTCTGAGTCCTTCAGACAACTCCATAATGGACATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS GCA 90 bp TTTGGTAATGGCACACAGGAATGTCACAGAGCTCAGGGACAGCTGTaGATGGGGAAGCCGTTTTCCAGGTATACTCGGCCCATCAATTAT +
Preference number: 5 (lower is better)
Translates to: FGNGTQECHRAQGQL*MGKPFSRYTRPINY
Trigger: ATAATTGATGGGCCGAGTATACCTGGAAAACGGCTTCCCCATGCACAGCTGTCCCTGAGCTCTGTGACATTCCTGTGTGCCATTACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS GCA 90 bp TCTGACATGGCAGGATTAGGCTGGAGTCTAAGGTGTTGGCTCCATTaGCGTATCCGAGCCTTCCTGTCTCTCTACTTCCTGATTTGTAAC +
Preference number: 5 (lower is better)
Translates to: SDMAGLGWSLRCWLH*RIRAFLSLYFLICN
Trigger: GTTACAAATCAGGAAGTAGAGAGACAGGAAGGCTCGGATACGGCAATGGAGCCAACACCTTAGACTCCAGCCTAATCCTGCCATGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 90 bp AAGCTCATCAAATGTGATGTTCCTATAATCCGGCCTTTCCACAGATaGGGACACAGAGAGTGTCTTATTAGTCGGACCCAGAGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: KLIKCDVPIIRPFHR*GHRECLISRTQSPC
Trigger: GCAGGGGCTCTGGGTCCGACTAATAAGACACTCTCTGTGTCCCCATCTGTGGAAAGGCCGGATTATAGGAACATCACATTTGATGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
ENST00000679569.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
ENST00000681937.1
CDS CCA 90 bp GTAATGGCACACAGGAATGTCACAGAGCTCAGGGACAGCTGTGCATaGGGAAGCCGTTTTCCAGGTATACTCGGCCCATCAATTATTCTT +
Preference number: 5 (lower is better)
Translates to: VMAHRNVTELRDSCA*GSRFPGILGPSIIL
Trigger: AAGAATAATTGATGGGCCGAGTATACCTGGAAAACGGCTTCCCCATGCACAGCTGTCCCTGAGCTCTGTGACATTCCTGTGTGCCATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS-3UTR CAA 90 bp TGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAATGCACAAAGGTACCTTaGCGATGTCTGGCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: CIASRMASIPRKEKDKLECTKVP*RCLARK
Trigger: CTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCA...TTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CACTGCCACAGTAGGCCCACAGTTCTCGGCGAACTCTTTCATGGAGCTCTTCTGTCAATCACAGCAAAATaGGAGGAGTCGATGCACAAA +
Preference number: 5 (lower is better)
Translates to: HCHSRPTVLGELFHGALLSITAK*EESMHK
Trigger: TTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGA...CAGAAGAGCTCCATGAAAGAGTTCGCCGAGAACTGTGGGCCTACTGTGGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCACACCACCACACTCTaGGACGCGTCCAGGACATGG +
Preference number: 5 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCHTTTL*DASRTW
Trigger: CCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGTG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTCCTCGATTCGGGTACTaGCCCCGGAGCTGCCAGACA +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAPRFGY*PRSCQT
Trigger: TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGG...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AAAATCATTTCATCCAGGGAAGGAGTGATGAGTCCTGACAGGCCAATTATATCTCCTCGATTCGGGTACTaGCCCCGGAGCTGCCAGACA +
Preference number: 5 (lower is better)
Translates to: KIISSREGVMSPDRPIISPRFGY*PRSCQT
Trigger: TGTCTGGCAGCTCCGGGGCAAGTACCCGAATCGAGG...AGATATAATTGGCCTGTCAGGACTCATCACTCCTTCCCTGGATGAAATGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTGGCCCGGAGTTTCTTTaGACTAATCAGTGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCGPEFL*TNQCVQ
Trigger: CTGAACACACTGATTAGTCAAAAGAAACTCCGGGCC...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGAGAAAGCATGGCTGCTaGACCACACTGGGGCAAATG +
Preference number: 5 (lower is better)
Translates to: LPFLGRRRTSWKDLHLFWRKHGC*TTLGQM
Trigger: CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCT...CCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CAA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTTTGAGGCTTGTTGCTaGAGTGGTGGCACCATTCTT +
Preference number: 5 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCFEACC*SGGTIL
Trigger: AAGAATGGTGCCACCACTCAAGCAACAAGCCTCAAA...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GCAGTATCAAAAATAGTTTCAATGAGTAAGATATCAACCCCGCCATCCAGAAGTCAAGGCCCGGGTCTTTaGACGCCTCCCGTTGGCTCG +
Preference number: 5 (lower is better)
Translates to: AVSKIVSMSKISTPPSRSQGPGL*TPPVGS
Trigger: CGAGCCAACGGGAGGCGTCAAAAGACCCGGGCCTTG...ACTTCTGGATGGCGGGGTTGATATCTTACTCATTGAAACTATTTTTGATACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CAA 90 bp AGAGTCCGCCCACTTTTATCAACGATCGTCCCTGAAATAAAGATAGGCCGGGGAAAGGCCATAGTCAGCTaGGGCAATACTAGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RVRPLLSTIVPEIKIGRGKAIVS*GNTSAA
Trigger: AGCAGCACTAGTATTGCCCAAGCTGACTATGGCCTT...TCCCCGGCCTATCTTTATTTCAGGGACGATCGTTGATAAAAGTGGGCGGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CAA 90 bp CGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAATCCTTTGGCCTGCTCTaGGTATGCTTCAACAAGCTC +
Preference number: 5 (lower is better)
Translates to: RHPEVLWPALGMLQQAHQSFGLL*VCFNKL
Trigger: GAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA...TTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CAA 90 bp GTCATAGTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGGCAAACAAGGCTGCCTaGGCATTGGCAGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: VIVFKDLGPNKRGLHWVRANKAA*ALAVSK
Trigger: TTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTGC...CCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGACTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp GAGTGGTTCTCCATGAGACACGCTGATGACAAATCCCTCTCCTGTCTGTCCGGACTCCTCAAAAAGATTTaGGAGTGCAAACAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: EWFSMRHADDKSLSCLSGLLKKI*ECKQGC
Trigger: GCAGCCTTGTTTGCACTCCAAAATCTTTTTGAGGAG...TCCGGACAGACAGGAGAGGGATTTGTCATCAGCGTGTCTCATGGAGAACCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CAA 90 bp GGCCTCTGTCTTAGCAAATGGTCCAGCCATCCACTCATTCCCCAAAGCCTGGTACCAATGTTAACAAAGTaGGTGTACGGTCCAATCCTG +
Preference number: 5 (lower is better)
Translates to: GLCLSKWSSHPLIPQSLVPMLTK*VYGPIL
Trigger: CAGGATTGGACCGTACACCAACTTTGTTAACATTGG...TACCAGGCTTTGGGGAATGAGTGGATGGCTGGACCATTTGCTAAGACAGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTGCAACCCTCTGTACTaGTGCTTTACCCTCAGCATA +
Preference number: 5 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCCNPLY*CFTLSI
Trigger: TATGCTGAGGGTAAAGCACAAGTACAGAGGGTTGCA...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATACCCGGCAGCCTGTGTaGCAGATGAATCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHTRQPV*QMNPEE
Trigger: CTCCTCTGGATTCATCTGCAACACAGGCTGCCGGGT...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp ATATCAACCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGTATGCTTCAACAAATGCGTACTTCACCTaGTACAGCCCAAGAGCAAGG +
Preference number: 5 (lower is better)
Translates to: ISTPPSRSPLACSWYASTNAYFT*YSPRAR
Trigger: CCTTGCTCTTGGGCTGTACAAGGTGAAGTACGCATT...TGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS TCA 90 bp CAAGGCGTTCTTCGACAGGGCCATTTCTCCACTCATCAGTCTGAATaGCTTTCTTCCCTCCTGTGCCTTGAGTCTGTCCTTCTTCATCAA +
Preference number: 5 (lower is better)
Translates to: QGVLRQGHFSTHQSE*LSSLLCLESVLLHQ
Trigger: TTGATGAAGAAGGACAGACTCAAGGCACAGGAGGGAAGAAAGTCATTCAGACTGATGAGTGGAGAAATGGCCCTGTCGAAGAACGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681177.1
ENST00000681937.1
CDS TCA 90 bp AGTCCCCTTAGTAGAGAAACTAAAAGGAATCTACAGATAGACCCTTaGTTCAAGCGTCCTCCCGCCTGGGAAGGCAGAGAGAACATGCTG +
Preference number: 5 (lower is better)
Translates to: SPLSRETKRNLQIDP*FKRPPAWEGRENML
Trigger: CAGCATGTTCTCTCTGCCTTCCCAGGCGGGAGGACGCTTGAATCAAGGGTCTATCTGTAGATTCCTTTTAGTTTCTCTACTAAGGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS TCA 90 bp GTTGGCTCCATTGCCGTATCCGAGCCTTCCTGTCTCTCTACTTCCTaGTTTGTAACCAGGGATCAGGGAACTTCCTATTCTACCAATCTC +
Preference number: 5 (lower is better)
Translates to: VGSIAVSEPSCLSTS*FVTRDQGTSYSTNL
Trigger: GAGATTGGTAGAATAGGAAGTTCCCTGATCCCTGGTTACAAATCAGGAAGTAGAGAGACAGGAAGGCTCGGATACGGCAATGGAGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS GCA 90 bp AAGTATAGGCAAATGAAGTCCCAAATTCAGGACTGCTGTGCTTTCTaGAGGGGAGGAAGGGACACATGTGGGACTTCCGATACATACTCC +
Preference number: 5 (lower is better)
Translates to: KYRQMKSQIQDCCAF*RGGRDTCGTSDTYS
Trigger: GGAGTATGTATCGGAAGTCCCACATGTGTCCCTTCCTCCCCTGCAGAAAGCACAGCAGTCCTGAATTTGGGACTTCATTTGCCTATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS-3UTR CAA 90 bp GTCGTCCTCTCCTTCCTTCAGACTAATGCTATTGACAATGCACTTCCCTTGGCAGGAAAACCCCATGCATaGCTTCTCGAATGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: VVLSFLQTNAIDNALPLAGKPHA*LLEWLP
Trigger: TGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCC...TGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCTGAAGGAAGGAGAGGACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TTGACATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTGGCAACACACAAGGGGTTTTTGAAGTGGTaGCTCCTCCAATCAACAATG +
Preference number: 5 (lower is better)
Translates to: LTSNTWAPISTCTLATHKGFLKW*LLQSTM
Trigger: CATTGTTGATTGGAGGAGCAACCACTTCAAAAACCC...CTTGTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CAA 90 bp TGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAACTGCTGTGTGGGTTTTaGAAGTGGTTGCTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: CIASRMASIPRKEKDKLELLCGF*KWLLLQ
Trigger: TTGGAGGAGCAACCACTTCAAAAACCCACACAGCAG...TTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCACACCACCACACTCTaGGACGCGTCCAGGACATGG +
Preference number: 5 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGHTTTL*DASRTW
Trigger: CCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGTG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp ATGCACTTCCCTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGCAGGTGAATGTCGTCTaGGATACTCTGTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: MHFPWQHFNPASITAKLEQVNVV*DTLCWP
Trigger: TGGCCAGCACAGAGTATCCAAGACGACATTCACCTG...CTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTCTGAAGCAGGTGCCATaGCTAATGATTCTGTTAACC +
Preference number: 5 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCLKQVP*LMILLT
Trigger: GGTTAACAGAATCATTAGCAATGGCACCTGCTTCAG...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCGTGAGCGCATGCCTTTaGCCAAAGGGAGTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: KGTFAMSGSEAIKLQNLVVSACL*PKGVLQ
Trigger: CTGCAGAACTCCCTTTGGCAAAAGGCATGCGCTCAC...GACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CAA 90 bp ACTATATTGACCAAGCCATCCATAGCAAAATCCTTTAGGTGCTTGGCCATCATAAGCGCGGGTGACATGTaGTCGAGTCTCCTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: TILTKPSIAKSFRCLAIISAGDM*SSLLLA
Trigger: CGCAAGGAGGAGACTCGACAACATGTCACCCGCGCT...TATGATGGCCAAGCACCTAAAGGATTTTGCTATGGATGGCTTGGTCAATATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463959.1
CDS-3UTR CAA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTTTCTGCAGAATGGCATaGATCTCATCCCGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFFCRMA*ISSRRV
Trigger: AACCCTGCGGGATGAGATCAATGCCATTCTGCAGAA...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366577.10
CDS-3UTR CAA 90 bp GGCTCCCATTTCCACCTGCACTTTGGCAACACACAAGGCTTCTTCATAGTTTCCCTTAAAATGTCATTGTaGCCTTTCAGCGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GSHFHLHFGNTQGFFIVSLKMSL*PFSGLA
Trigger: TGCCAGGCCGCTGAAAGGCAACAATGACATTTTAAG...GGAAACTATGAAGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp GGGAGGACGAAAATGCCCAGAAAGCATGGCTGCTTGACCACACTGGGGCAAATGGTATTCCTTATGGATTaGGTAAATGACATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GRTKMPRKHGCLTTLGQMVFLMD*VNDIRL
Trigger: CAGCCTGATGTCATTTACCAAATCCATAAGGAATAC...CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCTGGGCATTTTCGTCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000650888.1
CDS-3UTR CAA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAAAGGCCATAGTCAGCTaGGGCAATACTAGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: REFCSHLVQPLENEVFRRKAIVS*GNTSAA
Trigger: AGCAGCACTAGTATTGCCCAAGCTGACTATGGCCTT...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TCAATGAGTAAGATATCAACCCCGCCATCCAGAAGTCCTTTGGCCTGCTCTTGGGCAAACAAGGCTGCCTaGGCATTGGCAGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: SMSKISTPPSRSPLACSWANKAA*ALAVSK
Trigger: TTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTGC...CCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGATATCTTACTCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS-3UTR CAA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTCTCCTCAAAAAGATTTaGGAGTGCAAACAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCLLKKI*ECKQGC
Trigger: GCAGCCTTGTTTGCACTCCAAAATCTTTTTGAGGAG...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GTCATAGTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGCTCCTCAAAAAGATTTaGGAGTGCAAACAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VIVFKDLGPNKRGLHWVRLLKKI*ECKQGC
Trigger: GCAGCCTTGTTTGCACTCCAAAATCTTTTTGAGGAG...CCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGACTATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCACATGCCATCATCCATGTaGACATCCAACACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: WQHFNPASITAKLEESMHMPSSM*TSNTWA
Trigger: AGCCCAGGTGTTGGATGTCAACATGGATGATGGCAT...GTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTGGATTTCCACCTGCACTTaGGCAACACACAAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LPFLGRRRTSWKDLHLFWISTCT*ATHKAS
Trigger: GGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAAT...CCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651455.1
CDS GCA 90 bp GACCATCAAGCACCTTACTATGCACCTGGCACCTGGTATACATTCTaGAAATGTTTGTTTCCACCTGTCTTCCCCTTTCAAGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: DHQAPYYAPGTWYTF*KCLFPPVFPFQGKP
Trigger: TGGCTTCCCTTGAAAGGGGAAGACAGGTGGAAACAAACATTTGCAGAATGTATACCAGGTGCCAGGTGCATAGTAAGGTGCTTGATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS-3UTR CAA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCACACCACCACACTCTaGGACGCGTCCAGGACATGG +
Preference number: 5 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFHTTTL*DASRTW
Trigger: CCATGTCCTGGACGCGTCCAAGAGTGTGGTGGTGTG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAGGCCCGGAGTTTCTTTaGACTAATCAGTGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: REFCSHLVQPLENEVFRRGPEFL*TNQCVQ
Trigger: CTGAACACACTGATTAGTCAAAAGAAACTCCGGGCC...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CCTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGGGCCCGGAGTTTCTTTaGACTAATCAGTGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: PWQHFNPASITAKLEESMGPEFL*TNQCVQ
Trigger: CTGAACACACTGATTAGTCAAAAGAAACTCCGGGCC...CATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGTGAGCGCATGCCTTTaGCCAAAGGGAGTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCVSACL*PKGVLQ
Trigger: CTGCAGAACTCCCTTTGGCAAAAGGCATGCGCTCAC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCAGAAAGCATGGCTGCTaGACCACACTGGGGCAAATG +
Preference number: 5 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPRKHGC*TTLGQM
Trigger: CATTTGCCCCAGTGTGGTCAAGCAGCCATGCTTTCT...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCTTTATGCTGCCCACTaGTCCAACTCCGCACGGGAT +
Preference number: 5 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQLYAAH*SNSARD
Trigger: ATCCCGTGCGGAGTTGGACAAGTGGGCAGCATAAAG...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TGCTCCATAGATGATCCCATCGCACTGCAGCCTGACCTCCATCTCCACGTTCAACACCATGACACTGTCTaGACAATAAAACTTGGTATC +
Preference number: 5 (lower is better)
Translates to: CSIDDPIALQPDLHLHVQHHDTV*TIKLGI
Trigger: GATACCAAGTTTTATTGTCAAGACAGTGTCATGGTG...TTGAACGTGGAGATGGAGGTCAGGCTGCAGTGCGATGGGATCATCTATGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACAAGGCCCGGGTCTTTaGACGCCTCCCGTTGGCTCG +
Preference number: 5 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSQGPGL*TPPVGS
Trigger: CGAGCCAACGGGAGGCGTCAAAAGACCCGGGCCTTG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTAGCGCGGGTGACATGTaGTCGAGTCTCCTCCTTGCG +
Preference number: 5 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSSAGDM*SSLLLA
Trigger: CGCAAGGAGGAGACTCGACAACATGTCACCCGCGCT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCTTCAGACCTTCGGGTaGCGACAGGTCTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFLQTFG*RQVLER
Trigger: GCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAAG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCACCTTAAAATGTCATTGTaGCCTTTCAGCGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: WQHFNPASITAKLEESMHLKMSL*PFSGLA
Trigger: TGCCAGGCCGCTGAAAGGCAACAATGACATTTTAAG...GTGCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGAAATCCTTTAGGTGCTaGGCCATCATAGAAGGCGTT +
Preference number: 5 (lower is better)
Translates to: PCIASRMASIPRKEKDKLKSFRC*AIIEGV
Trigger: AACGCCTTCTATGATGGCCAAGCACCTAAAGGATTT...CAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCATTTCCACCTGCACTTaGGCAACACACAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LGSTLTQLQSQQNWRSRCISTCT*ATHKAS
Trigger: AGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAAT...GCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGAATTTCCACCTGCACTTaGGCAACACACAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: REFCSHLVQPLENEVFRRISTCT*ATHKAS
Trigger: AGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAAT...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GAAGGAGTGATGAGTCCTGACAGGCCAATTATATCTGCTTTGTGGTCAAGAGCAATGCCATCATCCATGTaGACATCCAACACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: EGVMSPDRPIISALWSRAMPSSM*TSNTWA
Trigger: AGCCCAGGTGTTGGATGTCAACATGGATGATGGCAT...TGCTCTTGACCACAAAGCAGATATAATTGGCCTGTCAGGACTCATCACTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp GCTCTCCATCCAACTCCTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTTCGAAACGCTCTTCATaGCTTTCTCGGCATTGCACT +
Preference number: 5 (lower is better)
Translates to: ALHPTPVPRGSAQFKTTFSKRSS*LSRHCT
Trigger: AGTGCAATGCCGAGAAAGCAATGAAGAGCGTTTCGA...AAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAGGAGTTGGATGGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTGGCCTCTTTGCAGCATaGGGTTCTGCTGGCATGCTT +
Preference number: 5 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCGLFAA*GSAGML
Trigger: AAGCATGCCAGCAGAACCCAATGCTGCAAAGAGGCC...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGGGCCTCTTTGCAGCATaGGGTTCTGCTGGCATGCTT +
Preference number: 5 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQGLFAA*GSAGML
Trigger: AAGCATGCCAGCAGAACCCAATGCTGCAAAGAGGCC...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCTGCAACCCTCTGTACTaGTGCTTTACCCTCAGCATA +
Preference number: 5 (lower is better)
Translates to: SSEENRATPSPSESTVITCNPLY*CFTLSI
Trigger: TATGCTGAGGGTAAAGCACAAGTACAGAGGGTTGCA...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGACATGGAAGGCTTaGCATGCCTCTAAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCQTWKA*HASKGL
Trigger: CAGCCCCTTAGAGGCATGCAAAGCCTTCCATGTCTG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS GCA 90 bp AGCTGCTATGAGTCCATCTCAGGATGGTATCTGGCACACAACACCTaGTCCATAAATGGTACCTATTCCCTTTCTTTCCAGTCATCAGTC +
Preference number: 5 (lower is better)
Translates to: SCYESISGWYLAHNT*SINGTYSLSFQSSV
Trigger: GACTGATGACTGGAAAGAAAGGGAATAGGTACCATTTATGGAGCAGGTGTTGTGTGCCAGATACCATCCTGAGATGGACTCATAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 90 bp GCCTCTCCTTCCTTCAGACTAATGCTATTGACAATGCACTTCCCTTaGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ASPSFRLMLLTMHFP*QHFNPASITAKLEE
Trigger: CTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCTGAAGGAAGGAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366576.3
CDS CCA 90 bp GTCCATCTCAGGATGGTATCTGGCACACAACACCTGCTCCATAAATaGTACCTATTCCCTTTCTTTCCAGTCATCAGTCACTCATCAGCA +
Preference number: 5 (lower is better)
Translates to: VHLRMVSGTQHLLHK*YLFPFFPVISHSSA
Trigger: TGCTGATGAGTGACTGATGACTGGAAAGAAAGGGAATAGGTACCATTTATGGAGCAGGTGTTGTGTGCCAGATACCATCCTGAGATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS-3UTR CAA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGATGCAAAATCTGGTCATaGCACTTGGACCATCTAGCA +
Preference number: 5 (lower is better)
Translates to: REFCSHLVQPLENEVFRRCKIWS*HLDHLA
Trigger: TGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCA...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AACGAGGTCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTCGGAAGCAATTAAGTaGCAAAATCTGGTCATTGCA +
Preference number: 5 (lower is better)
Translates to: NEVFRREQSYTFPVRIHCSEAIK*QNLVIA
Trigger: TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGA...ACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGACCTCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCTCGGAAGCAATTAAGTaGCAAAATCTGGTCATTGCA +
Preference number: 5 (lower is better)
Translates to: HDAAVVVTIILIGLAQLFSEAIK*QNLVIA
Trigger: TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGA...GAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCATGCACAAAGGTACCTTaGCGATGTCTGGCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPCTKVP*RCLARK
Trigger: CTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCA...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGTTAATGGCATACAAGTaGTGTTCCTCCATTCCAGTC +
Preference number: 5 (lower is better)
Translates to: PCIASRMASIPRKEKDKLLMAYK*CSSIPV
Trigger: GACTGGAATGGAGGAACACAACTTGTATGCCATTAA...CAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTACAATTTTTCACAGCTTCGGAAAACCCCATGCATaGCTTCTCGAATGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SFKSSGRWNSRLTIFHSFGKPHA*LLEWLP
Trigger: TGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCC...GAAGCTGTGAAAAATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCGGAAAACCCCATGCATaGCTTCTCGAATGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPGKPHA*LLEWLP
Trigger: TGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCC...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CATGATGCTGCTGTAGTCGTCACCATCATCCTCATAGGCCTTGCTCAGCTCTTCGGTCCTTCAATTATATaGAGAGGTCGGGGATATTTT +
Preference number: 5 (lower is better)
Translates to: HDAAVVVTIILIGLAQLFGPSII*RGRGYF
Trigger: AAAATATCCCCGACCTCTCAATATAATTGAAGGACC...GAAGAGCTGAGCAAGGCCTATGAGGATGATGGTGACGACTACAGCAGCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGACTCCAACTATGTTCTaGCCTATGTCGTGCACGTCG +
Preference number: 5 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWTPTMF*PMSCTS
Trigger: CGACGTGCACGACATAGGCAAGAACATAGTTGGAGT...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCCTGCTGTGTGGGTTTTaGAAGTGGTTGCTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPILLCGF*KWLLLQ
Trigger: TTGGAGGAGCAACCACTTCAAAAACCCACACAGCAG...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp GTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGTTCAGATCTCCACCTACTGTTTaGTCGTTAAATATCTTGGGA +
Preference number: 5 (lower is better)
Translates to: VFKDLGPNKRGLHWVRFRSPPTV*SLNILG
Trigger: TCCCAAGATATTTAACGACAAAACAGTAGGTGGAGA...TCTGAACCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGGTGAATGTCGTCTaGGATACTCTGTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCQVNVV*DTLCWP
Trigger: TGGCCAGCACAGAGTATCCAAGACGACATTCACCTG...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCCTGAAGCAGGTGCCATaGCTAATGATTCTGTTAACC +
Preference number: 5 (lower is better)
Translates to: SSEENRATPSPSESTVITLKQVP*LMILLT
Trigger: GGTTAACAGAATCATTAGCAATGGCACCTGCTTCAG...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CTTGGCAGCACTTTAACCCAGCTTCAATCACAGCAAAATTGGAGGAGTCGATGCCTGAAGCAGGTGCCATaGCTAATGATTCTGTTAACC +
Preference number: 5 (lower is better)
Translates to: LGSTLTQLQSQQNWRSRCLKQVP*LMILLT
Trigger: GGTTAACAGAATCATTAGCAATGGCACCTGCTTCAG...GCATCGACTCCTCCAATTTTGCTGTGATTGAAGCTGGGTTAAAGTGCTGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGTTAAGGCACCCTAGGTaGTATTTCCTTGAGGATCAT +
Preference number: 5 (lower is better)
Translates to: PCIASRMASIPRKEKDKLLRHPR*YFLEDH
Trigger: ATGATCCTCAAGGAAATACAACCTAGGGTGCCTTAA...CAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGTCTCACAGTATCATTTaGTCACAGGGTCACACTTCT +
Preference number: 5 (lower is better)
Translates to: HALLLEWLPFLGRRRTSWSHSII*SQGHTS
Trigger: AGAAGTGTGACCCTGTGACAAAATGATACTGTGAGA...CCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGGTGAGCGCATGCCTTTaGCCAAAGGGAGTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGVSACL*PKGVLQ
Trigger: CTGCAGAACTCCCTTTGGCAAAAGGCATGCGCTCAC...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTCTTTATGCTGCCCACTaGTCCAACTCCGCACGGGAT +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQALYAAH*SNSARD
Trigger: ATCCCGTGCGGAGTTGGACAAGTGGGCAGCATAAAG...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GCAACATTACAGCGCTCTCCAATGTTAACAAAGTTGGTGTACGGTCCAATCCTGTTTGAGGCTTGTTGCTaGAGTGGTGGCACCATTCTT +
Preference number: 5 (lower is better)
Translates to: ATLQRSPMLTKLVYGPILFEACC*SGGTIL
Trigger: AAGAATGGTGCCACCACTCAAGCAACAAGCCTCAAA...CAGGATTGGACCGTACACCAACTTTGTTAACATTGGAGAGCGCTGTAATGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CAA 90 bp GTCTTCAAAGACCTGGGTCCCAATAAACGTGGGCTTCACTGGGTGAGGTTCAGAGTATTCCTTATGGATTaGGTAAATGACATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VFKDLGPNKRGLHWVRFRVFLMD*VNDIRL
Trigger: CAGCCTGATGTCATTTACCAAATCCATAAGGAATAC...TCTGAACCTCACCCAGTGAAGCCCACGTTTATTGGGACCCAGGTCTTTGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TCCTTCAAAAGCAGTGGCAGGTGGAACTCTAGGCTTACAATTTTTCACAGCTTCTCCTTTGGCCTGCTCTaGGTATGCTTCAACAAGCTC +
Preference number: 5 (lower is better)
Translates to: SFKSSGRWNSRLTIFHSFSFGLL*VCFNKL
Trigger: GAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA...GAAGCTGTGAAAAATTGTAAGCCTAGAGTTCCACCTGCCACTGCTTTTGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCAAATCCTTTAGGTGCTaGGCCATCATAGAAGGCGTT +
Preference number: 5 (lower is better)
Translates to: SSEENRATPSPSESTVITKSFRC*AIIEGV
Trigger: AACGCCTTCTATGATGGCCAAGCACCTAAAGGATTT...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CCAATGTTAACAAAGTTGGTGTACGGTCCAATCCTGAAGGGCTCTAGACCAGACCCAATGTTAACAAAGTaGGTGTACGGTCCAATCCTG +
Preference number: 5 (lower is better)
Translates to: PMLTKLVYGPILKGSRPDPMLTK*VYGPIL
Trigger: CAGGATTGGACCGTACACCAACTTTGTTAACATTGG...GTCTGGTCTAGAGCCCTTCAGGATTGGACCGTACACCAACTTTGTTAACATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATATGCCATCATCCATGTaGACATCCAACACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHMPSSM*TSNTWA
Trigger: AGCCCAGGTGTTGGATGTCAACATGGATGATGGCAT...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS TCA 90 bp ACCACAGCCAGGGGAAATTTGACAAGAGGAAACAGGCTGGATTCTTaGTTGGTTTGTACTTTCATCAGCTGCTGCTCTGCAGCTCAATTT +
Preference number: 5 (lower is better)
Translates to: TTARGNLTRGNRLDS*LVCTFISCCSAAQF
Trigger: AAATTGAGCTGCAGAGCAGCAGCTGATGAAAGTACAAACCAATCAAGAATCCAGCCTGTTTCCTCTTGTCAAATTTCCCCTGGCTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 90 bp GCAATCGGGTATCGTCAAATGAGAATAAGCTTCACAACGCACAGATaGCAGCCTGTATTGTGCACTGTTACATCCCCAGTACTTGGAATT +
Preference number: 5 (lower is better)
Translates to: AIGYRQMRISFTTHR*QPVLCTVTSPVLGI
Trigger: AATTCCAAGTACTGGGGATGTAACAGTGCACAATACAGGCTGCCATCTGTGCGTTGTGAAGCTTATTCTCATTTGACGATACCCGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS-3UTR CAA 90 bp ATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTTGCAAAATCTGGTCATaGCACTTGGACCATCTAGCA +
Preference number: 5 (lower is better)
Translates to: MASIPRKEKDKLERPPLICKIWS*HLDHLA
Trigger: TGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCA...AATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TCTTCCGAAGAGAACAGAGCTACACCTTCCCCGTCAGAATCCACTGTTATAACCTCAATCACAGCAAAATaGGAGGAGTCGATGCACAAA +
Preference number: 5 (lower is better)
Translates to: SSEENRATPSPSESTVITSITAK*EESMHK
Trigger: TTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGA...GGTTATAACAGTGGATTCTGACGGGGAAGGTGTAGCTCTGTTCTCTTCGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTTGGAATCAATCACAGCAAAATaGGAGGAGTCGATGCACAAA +
Preference number: 5 (lower is better)
Translates to: CIASRMASIPRKEKDKLESITAK*EESMHK
Trigger: TTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGA...TTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAACTCCAACTATGTTCTaGCCTATGTCGTGCACGTCG +
Preference number: 5 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPTPTMF*PMSCTS
Trigger: CGACGTGCACGACATAGGCAAGAACATAGTTGGAGT...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTACTCCAACTATGTTCTaGCCTATGTCGTGCACGTCG +
Preference number: 5 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCTPTMF*PMSCTS
Trigger: CGACGTGCACGACATAGGCAAGAACATAGTTGGAGT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGTTGTCGTTAAATATCTaGGGAAAGCCTCGATTCGGG +
Preference number: 5 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRLSLNI*GKPRFG
Trigger: CCCGAATCGAGGCTTTCCCAAGATATTTAACGACAA...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGCAGGTGAATGTCGTCTaGGATACTCTGTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGQVNVV*DTLCWP
Trigger: TGGCCAGCACAGAGTATCCAAGACGACATTCACCTG...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GAAGGAGTGATGAGTCCTGACAGGCCAATTATATCTGCTTTGTGGTCAAGAGCACTGAAGCAGGTGCCATaGCTAATGATTCTGTTAACC +
Preference number: 5 (lower is better)
Translates to: EGVMSPDRPIISALWSRALKQVP*LMILLT
Trigger: GGTTAACAGAATCATTAGCAATGGCACCTGCTTCAG...TGCTCTTGACCACAAAGCAGATATAATTGGCCTGTCAGGACTCATCACTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGCTGAAGCAGGTGCCATaGCTAATGATTCTGTTAACC +
Preference number: 5 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRLKQVP*LMILLT
Trigger: GGTTAACAGAATCATTAGCAATGGCACCTGCTTCAG...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGATGTCACCAGGTCATTTaGCAAAGGTCAACATATGCA +
Preference number: 5 (lower is better)
Translates to: REFCSHLVQPLENEVFRRCHQVI*QRSTYA
Trigger: TGCATATGTTGACCTTTGCAAAATGACCTGGTGACA...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp ATGATGAGTTTAGCAAACTTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGTTCTGCAGAATGGCATaGATCTCATCCCGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: MMSLANFLDPATLQRSPMFCRMA*ISSRRV
Trigger: AACCCTGCGGGATGAGATCAATGCCATTCTGCAGAA...CATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACTCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGCTTAAAATGTCATTGTaGCCTTTCAGCGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWLKMSL*PFSGLA
Trigger: TGCCAGGCCGCTGAAAGGCAACAATGACATTTTAAG...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366577.10
CDS-3UTR CAA 90 bp CAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCATGTTGACAGCAAACAAGGCTGCCTaGGCATTGGCAGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: QNLVIALGPSSMPSSMLTANKAA*ALAVSK
Trigger: TTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTGC...TGTCAACATGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCGCAAACAAGGCTGCCTaGGCATTGGCAGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPANKAA*ALAVSK
Trigger: TTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTGC...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTATGCCATCATCCATGTaGACATCCAACACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCMPSSM*TSNTWA
Trigger: AGCCCAGGTGTTGGATGTCAACATGGATGATGGCAT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGATGCCATCATCCATGTaGACATCCAACACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQMPSSM*TSNTWA
Trigger: AGCCCAGGTGTTGGATGTCAACATGGATGATGGCAT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCATCTGGTCATTGCACTaGGACCATCTAGCATGCCAT +
Preference number: 5 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPIWSLH*DHLACH
Trigger: ATGGCATGCTAGATGGTCCAAGTGCAATGACCAGAT...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGAGGGTGCTAGGGCTTaGATACAGCGCTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPEGARA*IQRFLS
Trigger: AGAAAGAAAGCGCTGTATCAAAGCCCTAGCACCCTC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTAGCAAGTATTCCGGGTaGCGACAGGTCTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFSKYSG*RQVLER
Trigger: GCGCTCCAAGACCTGTCGCAACCCGGAATACTTGCT...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674797.2
CDS TCA 90 bp CACAAACTTAAACTGCCTCACACGGCTGTGTGGAAATTAAAAGCATaGCCATCAAGCACCTTACTATGCACCTGGCACCTGGTATACATT +
Preference number: 5 (lower is better)
Translates to: HKLKLPHTAVWKLKA*PSSTLLCTWHLVYI
Trigger: AATGTATACCAGGTGCCAGGTGCATAGTAAGGTGCTTGATGGTCATGCTTTTAATTTCCACACAGCCGTGTGAGGCAGTTTAAGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS TCA 90 bp GTATGTGCCTGGCCCAGTTCCCCTCTCCAGAGGCTACTAAAAAGGTaGACTCTGAGAATTCATTCTATTAAATGCCCTAATATGTCACAG +
Preference number: 5 (lower is better)
Translates to: VCAWPSSPLQRLLKR*TLRIHSIKCPNMSQ
Trigger: CTGTGACATATTAGGGCATTTAATAGAATGAATTCTCAGAGTTCACCTTTTTAGTAGCCTCTGGAGAGGGGAACTGGGCCAGGCACATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 90 bp AACCAGGGATCAGGGAACTTCCTATTCTACCAATCTCAGGGGCTCTaGGAGAACACAGAAGCTTCTAGAGTATTTTTCTCTCATTTGACT +
Preference number: 5 (lower is better)
Translates to: NQGSGNFLFYQSQGL*ENTEASRVFFSHLT
Trigger: AGTCAAATGAGAGAAAAATACTCTAGAAGCTTCTGTGTTCTCCCAGAGCCCCTGAGATTGGTAGAATAGGAAGTTCCCTGATCCCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS-3UTR CAA 90 bp CAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCATGTTGACATGCAAAATCTGGTCATaGCACTTGGACCATCTAGCA +
Preference number: 5 (lower is better)
Translates to: QNLVIALGPSSMPSSMLTCKIWS*HLDHLA
Trigger: TGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCA...TGTCAACATGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCTGCAAAATCTGGTCATaGCACTTGGACCATCTAGCA +
Preference number: 5 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPCKIWS*HLDHLA
Trigger: TGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCA...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CATGGTAAAGGAAAACCCCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGATCGGAAGCAATTAAGTaGCAAAATCTGGTCATTGCA +
Preference number: 5 (lower is better)
Translates to: HGKGKPHALLLEWLPFLGSEAIK*QNLVIA
Trigger: TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGA...TCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCCTTTACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CATGGTAAAGGAAAACCCCATGCATTGCTTCTCGAATGGCTTCCATTCCTCGGAGGTCCTTCAATTATATaGAGAGGTCGGGGATATTTT +
Preference number: 5 (lower is better)
Translates to: HGKGKPHALLLEWLPFLGGPSII*RGRGYF
Trigger: AAAATATCCCCGACCTCTCAATATAATTGAAGGACC...TCCGAGGAATGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCCTTTACCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp AGACTAATGCTATTGACAATGCACTTCCCTTGGCAGCACTTTAACCCAGCTTCAGGGTTTTTGAAGTGGTaGCTCCTCCAATCAACAATG +
Preference number: 5 (lower is better)
Translates to: RLMLLTMHFPWQHFNPASGFLKW*LLQSTM
Trigger: CATTGTTGATTGGAGGAGCAACCACTTCAAAAACCC...TGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp AGGGAGTTCTGCAGCCATTTAGTCCAGCCTTTAGAAAACGAGGTCTTCCGAAGATCTCCACCTACTGTTTaGTCGTTAAATATCTTGGGA +
Preference number: 5 (lower is better)
Translates to: REFCSHLVQPLENEVFRRSPPTV*SLNILG
Trigger: TCCCAAGATATTTAACGACAAAACAGTAGGTGGAGA...TCTTCGGAAGACCTCGTTTTCTAAAGGCTGGACTAAATGGCTGCAGAACTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGGCCCGGAGTTTCTTTaGACTAATCAGTGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPGPEFL*TNQCVQ
Trigger: CTGAACACACTGATTAGTCAAAAGAAACTCCGGGCC...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGTCTCACAGTATCATTTaGTCACAGGGTCACACTTCT +
Preference number: 5 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRSHSII*SQGHTS
Trigger: AGAAGTGTGACCCTGTGACAAAATGATACTGTGAGA...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GAAGGAGTGATGAGTCCTGACAGGCCAATTATATCTGCTTTGTGGTCAAGAGCATCTCACAGTATCATTTaGTCACAGGGTCACACTTCT +
Preference number: 5 (lower is better)
Translates to: EGVMSPDRPIISALWSRASHSII*SQGHTS
Trigger: AGAAGTGTGACCCTGTGACAAAATGATACTGTGAGA...TGCTCTTGACCACAAAGCAGATATAATTGGCCTGTCAGGACTCATCACTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCTTTATGCTGCCCACTaGTCCAACTCCGCACGGGAT +
Preference number: 5 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFLYAAH*SNSARD
Trigger: ATCCCGTGCGGAGTTGGACAAGTGGGCAGCATAAAG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TCCAGCATTCACTATCCCCATGTCCATGCCAGACTTGATTGCATGGTAAAGGAAAAGATGGTTCTTCATTaGTTCCTCCCTTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SSIHYPHVHARLDCMVKEKMVLH*FLPCFF
Trigger: GAAGAAGCAAGGGAGGAACAAATGAAGAACCATCTT...TTCCTTTACCATGCAATCAAGTCTGGCATGGACATGGGGATAGTGAATGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CAA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTTCTGCAGAATGGCATaGATCTCATCCCGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFFCRMA*ISSRRV
Trigger: AACCCTGCGGGATGAGATCAATGCCATTCTGCAGAA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCACTTAAAATGTCATTGTaGCCTTTCAGCGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPLKMSL*PFSGLA
Trigger: TGCCAGGCCGCTGAAAGGCAACAATGACATTTTAAG...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CGGAAATTATTGCAGCCAAGGACTACTCCAACTATGTTCTTGCCTATGTCGTGCATACTTAAAATGTCATaGTTGCCTTTCAGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: RKLLQPRTTPTMFLPMSCILKMS*LPFSGL
Trigger: CAGGCCGCTGAAAGGCAACAATGACATTTTAAGTAT...GCACGACATAGGCAAGAACATAGTTGGAGTAGTCCTTGGCTGCAATAATTTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp AGTTTAGCAAACTTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGTTAACAAAGGCCATAGTCAGCTaGGGCAATACTAGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SLANFLDPATLQRSPMLTKAIVS*GNTSAA
Trigger: AGCAGCACTAGTATTGCCCAAGCTGACTATGGCCTT...TGTTAACATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCAAGGCCATAGTCAGCTaGGGCAATACTAGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFKAIVS*GNTSAA
Trigger: AGCAGCACTAGTATTGCCCAAGCTGACTATGGCCTT...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTCCTTTGGCCTGCTCTaGGTATGCTTCAACAAGCTC +
Preference number: 5 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGSFGLL*VCFNKL
Trigger: GAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTCCTTTGGCCTGCTCTaGGTATGCTTCAACAAGCTC +
Preference number: 5 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFSFGLL*VCFNKL
Trigger: GAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCTCCTCAAAAAGATTTaGGAGTGCAAACAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPLLKKI*ECKQGC
Trigger: GCAGCCTTGTTTGCACTCCAAAATCTTTTTGAGGAG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCCAATGTTAACAAAGTaGGTGTACGGTCCAATCCTG +
Preference number: 5 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPPMLTK*VYGPIL
Trigger: CAGGATTGGACCGTACACCAACTTTGTTAACATTGG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCAATCTGGTCATTGCACTaGGACCATCTAGCATGCCAT +
Preference number: 5 (lower is better)
Translates to: LSCKIWSLHLDHLACHHPIWSLH*DHLACH
Trigger: ATGGCATGCTAGATGGTCCAAGTGCAATGACCAGAT...TGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGGAGGGTGCTAGGGCTTaGATACAGCGCTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGEGARA*IQRFLS
Trigger: AGAAAGAAAGCGCTGTATCAAAGCCCTAGCACCCTC...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS TCA 90 bp TCCTTCTCTCTCCCTGCTTTAGCTGGTTCAGTGTCCTCTGACCTGTaGCTCTGTTGGAGTAATAGTCTATGCATTTCCATGAATTTAAAC +
Preference number: 5 (lower is better)
Translates to: SFSLPALAGSVSSDL*LCWSNSLCISMNLN
Trigger: GTTTAAATTCATGGAAATGCATAGACTATTACTCCAACAGAGTCACAGGTCAGAGGACACTGAACCAGCTAAAGCAGGGAGAGAGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681937.1
CDS-3UTR CAA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGTCAATCACAGCAAAATaGGAGGAGTCGATGCACAAA +
Preference number: 5 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWSITAK*EESMHK
Trigger: TTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGA...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp TCTTTCTTTTTCCATGAAAGGGATAAGGTGGCCAACAGCCTTCTTCATAACCCGTCAATCACAGCAAAATaGGAGGAGTCGATGCACAAA +
Preference number: 5 (lower is better)
Translates to: SFFFHERDKVANSLLHNPSITAK*EESMHK
Trigger: TTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGA...CGGGTTATGAAGAAGGCTGTTGGCCACCTTATCCCTTTCATGGAAAAAGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAGATGCACACAGGGGTCCTTCAATTATATaGAGAGGTCGGGGATATTTT +
Preference number: 5 (lower is better)
Translates to: LNSLRKPEAGKCQPDAHRGPSII*RGRGYF
Trigger: AAAATATCCCCGACCTCTCAATATAATTGAAGGACC...CCTGTGTGCATCTGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTACTCCAACTATGTTCTaGCCTATGTCGTGCACGTCG +
Preference number: 5 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFTPTMF*PMSCTS
Trigger: CGACGTGCACGACATAGGCAAGAACATAGTTGGAGT...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCATAACTCGGAAATTATaGCAGCCAAGGACTACTCCA +
Preference number: 5 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPITRKL*QPRTTP
Trigger: TGGAGTAGTCCTTGGCTGCAATAATTTCCGAGTTAT...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCTGCTGTGTGGGTTTTaGAAGTGGTTGCTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFLLCGF*KWLLLQ
Trigger: TTGGAGGAGCAACCACTTCAAAAACCCACACAGCAG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCTGCTGTGTGGGTTTTaGAAGTGGTTGCTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSLLCGF*KWLLLQ
Trigger: TTGGAGGAGCAACCACTTCAAAAACCCACACAGCAG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTTGTCGTTAAATATCTaGGGAAAGCCTCGATTCGGG +
Preference number: 5 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQLSLNI*GKPRFG
Trigger: CCCGAATCGAGGCTTTCCCAAGATATTTAACGACAA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCATTGTCGTTAAATATCTaGGGAAAGCCTCGATTCGGG +
Preference number: 5 (lower is better)
Translates to: LSCKIWSLHLDHLACHHPLSLNI*GKPRFG
Trigger: CCCGAATCGAGGCTTTCCCAAGATATTTAACGACAA...TGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGTGAATGTCGTCTaGGATACTCTGTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFQVNVV*DTLCWP
Trigger: TGGCCAGCACAGAGTATCCAAGACGACATTCACCTG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp ACAAAGGTACCTTTGCGATGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTTAAGGCACCCTAGGTaGTATTTCCTTGAGGATCAT +
Preference number: 5 (lower is better)
Translates to: TKVPLRCLARKQLSCKIWLRHPR*YFLEDH
Trigger: ATGATCCTCAAGGAAATACAACCTAGGGTGCCTTAA...CCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACATCGCAAAGGTACCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGTTAAGGCACCCTAGGTaGTATTTCCTTGAGGATCAT +
Preference number: 5 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWLRHPR*YFLEDH
Trigger: ATGATCCTCAAGGAAATACAACCTAGGGTGCCTTAA...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTGAGGCTTGTTGCTaGAGTGGTGGCACCATTCTT +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAFEACC*SGGTIL
Trigger: AAGAATGGTGCCACCACTCAAGCAACAAGCCTCAAA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CCCTACAGATCTAACAACTGGTACTGTCAGACCCAACCTTTGCAAATCTTATGGAAGATGGTTCTTCATTaGTTCCTCCCTTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PYRSNNWYCQTQPLQILWKMVLH*FLPCFF
Trigger: GAAGAAGCAAGGGAGGAACAAATGAAGAACCATCTT...CCATAAGATTTGCAAAGGTTGGGTCTGACAGTACCAGTTGTTAGATCTGTAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCTGTCACCAGGTCATTTaGCAAAGGTCAACATATGCA +
Preference number: 5 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPCHQVI*QRSTYA
Trigger: TGCATATGTTGACCTTTGCAAAATGACCTGGTGACA...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCTGCAGAATGGCATaGATCTCATCCCGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSFCRMA*ISSRRV
Trigger: AACCCTGCGGGATGAGATCAATGCCATTCTGCAGAA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp GTTGCTCCTCCAATCAACAATGGAATCCTTATAGCTAATCTCTCCATTTCCTTGCTTAAAATGTCATTGTaGCCTTTCAGCGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: VAPPINNGILIANLSISLLKMSL*PFSGLA
Trigger: TGCCAGGCCGCTGAAAGGCAACAATGACATTTTAAG...CAAGGAAATGGAGAGATTAGCTATAAGGATTCCATTGTTGATTGGAGGAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CGGAAATTATTGCAGCCAAGGACTACTCCAACTATGTTCTTGCCTATGTCGTGCGTATTCCTTATGGATTaGGTAAATGACATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: RKLLQPRTTPTMFLPMSCVFLMD*VNDIRL
Trigger: CAGCCTGATGTCATTTACCAAATCCATAAGGAATAC...GCACGACATAGGCAAGAACATAGTTGGAGTAGTCCTTGGCTGCAATAATTTCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTAAGGCCATAGTCAGCTaGGGCAATACTAGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSKAIVS*GNTSAA
Trigger: AGCAGCACTAGTATTGCCCAAGCTGACTATGGCCTT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGGCAAACAAGGCTGCCTaGGCATTGGCAGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGANKAA*ALAVSK
Trigger: TTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTGC...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp ATGATGAGTTTAGCAAACTTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGCTCCTCAAAAAGATTTaGGAGTGCAAACAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: MMSLANFLDPATLQRSPMLLKKI*ECKQGC
Trigger: GCAGCCTTGTTTGCACTCCAAAATCTTTTTGAGGAG...CATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACTCATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGATTTCCACCTGCACTTaGGCAACACACAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGISTCT*ATHKAS
Trigger: AGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAAT...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTATCTGGTCATTGCACTaGGACCATCTAGCATGCCAT +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAIWSLH*DHLACH
Trigger: ATGGCATGCTAGATGGTCCAAGTGCAATGACCAGAT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GTTGCTCCTCCAATCAACAATGGAATCCTTATAGCTAATCTCTCCATTTCCTTGATCTGGTCATTGCACTaGGACCATCTAGCATGCCAT +
Preference number: 5 (lower is better)
Translates to: VAPPINNGILIANLSISLIWSLH*DHLACH
Trigger: ATGGCATGCTAGATGGTCCAAGTGCAATGACCAGAT...CAAGGAAATGGAGAGATTAGCTATAAGGATTCCATTGTTGATTGGAGGAGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTATGTCCTTTTTCTCTTaGCCGAGTTTCTCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCMSFFS*PSFSLG
Trigger: TCCCAGAGAGAAACTCGGCAAAGAGAAAAAGGACAT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGATGTCCTTTTTCTCTTaGCCGAGTTTCTCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQMSFFS*PSFSLG
Trigger: TCCCAGAGAGAAACTCGGCAAAGAGAAAAAGGACAT...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp TGTCTGGCTCGGAAGCAATTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATTTCTGTACCAGAACTTaGTACCAGTGTTTCCAACAG +
Preference number: 5 (lower is better)
Translates to: CLARKQLSCKIWSLHLDHFCTRT*YQCFQQ
Trigger: CTGTTGGAAACACTGGTACAAAGTTCTGGTACAGAA...ATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAATTGCTTCCGAGCCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTGCAAAATCTGGTCATaGCACTTGGACCATCTAGCA +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQACKIWS*HLDHLA
Trigger: TGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TATGGATATCATCATACACAGGGAGGTTTCCAGCATTCACTATCCCCATGTCCATCGGAAGCAATTAAGTaGCAAAATCTGGTCATTGCA +
Preference number: 5 (lower is better)
Translates to: YGYHHTQGGFQHSLSPCPSEAIK*QNLVIA
Trigger: TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGA...TGGACATGGGGATAGTGAATGCTGGAAACCTCCCTGTGTATGATGATATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463959.1
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCATGCACAAAGGTACCTTaGCGATGTCTGGCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSCTKVP*RCLARK
Trigger: CTTCCGAGCCAGACATCGCAAAGGTACCTTTGTGCA...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGTCAATCACAGCAAAATaGGAGGAGTCGATGCACAAA +
Preference number: 5 (lower is better)
Translates to: LYKVPLNSLRKPEAGKCQSITAK*EESMHK
Trigger: TTTGTGCATCGACTCCTCCAATTTTGCTGTGATTGA...CTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTGGAAAACCCCATGCATaGCTTCTCGAATGGCTTCCA +
Preference number: 5 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFGKPHA*LLEWLP
Trigger: TGGAAGCCATTCGAGAAGCAATGCATGGGGTTTTCC...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATGGTCCTTCAATTATATaGAGAGGTCGGGGATATTTT +
Preference number: 5 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHGPSII*RGRGYF
Trigger: AAAATATCCCCGACCTCTCAATATAATTGAAGGACC...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAATAACTCGGAAATTATaGCAGCCAAGGACTACTCCA +
Preference number: 5 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPITRKL*QPRTTP
Trigger: TGGAGTAGTCCTTGGCTGCAATAATTTCCGAGTTAT...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCAATAACTCGGAAATTATaGCAGCCAAGGACTACTCCA +
Preference number: 5 (lower is better)
Translates to: LSCKIWSLHLDHLACHHPITRKL*QPRTTP
Trigger: TGGAGTAGTCCTTGGCTGCAATAATTTCCGAGTTAT...TGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTGGGTTTTTGAAGTGGTaGCTCCTCCAATCAACAATG +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAGFLKW*LLQSTM
Trigger: CATTGTTGATTGGAGGAGCAACCACTTCAAAAACCC...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCTGCTGTGTGGGTTTTaGAAGTGGTTGCTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFLLCGF*KWLLLQ
Trigger: TTGGAGGAGCAACCACTTCAAAAACCCACACAGCAG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AGACTAATGCTATTGACAATGCACTTCCCTTGGCAGCACTTTAACCCAGCTTCATCTCCACCTACTGTTTaGTCGTTAAATATCTTGGGA +
Preference number: 5 (lower is better)
Translates to: RLMLLTMHFPWQHFNPASSPPTV*SLNILG
Trigger: TCCCAAGATATTTAACGACAAAACAGTAGGTGGAGA...TGAAGCTGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACAGGTGAATGTCGTCTaGGATACTCTGTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSQVNVV*DTLCWP
Trigger: TGGCCAGCACAGAGTATCCAAGACGACATTCACCTG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTTTAAGGCACCCTAGGTaGTATTTCCTTGAGGATCAT +
Preference number: 5 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCLRHPR*YFLEDH
Trigger: ATGATCCTCAAGGAAATACAACCTAGGGTGCCTTAA...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAAAGATGGTTCTTCATTaGTTCCTCCCTTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPKMVLH*FLPCFF
Trigger: GAAGAAGCAAGGGAGGAACAAATGAAGAACCATCTT...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AAAAGCAGGTTGACTTGCTTTGAAATCAAACGACCTCTGTCTTCAGTCTGTCCCCACCATGACACTGTCTaGACAATAAAACTTGGTATC +
Preference number: 5 (lower is better)
Translates to: KSRLTCFEIKRPLSSVCPHHDTV*TIKLGI
Trigger: GATACCAAGTTTTATTGTCAAGACAGTGTCATGGTG...GGGACAGACTGAAGACAGAGGTCGTTTGATTTCAAAGCAAGTCAACCTGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCCACCATGACACTGTCTaGACAATAAAACTTGGTATC +
Preference number: 5 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPIHHDTV*TIKLGI
Trigger: GATACCAAGTTTTATTGTCAAGACAGTGTCATGGTG...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTATACTTAAAATGTCATaGTTGCCTTTCAGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCILKMS*LPFSGL
Trigger: CAGGCCGCTGAAAGGCAACAATGACATTTTAAGTAT...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp ATGATGAGTTTAGCAAACTTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGATACTTAAAATGTCATaGTTGCCTTTCAGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: MMSLANFLDPATLQRSPMILKMS*LPFSGL
Trigger: CAGGCCGCTGAAAGGCAACAATGACATTTTAAGTAT...CATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACTCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCAATACTTAAAATGTCATaGTTGCCTTTCAGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPILKMS*LPFSGL
Trigger: CAGGCCGCTGAAAGGCAACAATGACATTTTAAGTAT...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp TTAAGTTGCAAAATCTGGTCATTGCACTTGGACCATCTAGCATGCCATCATCCAATACTTAAAATGTCATaGTTGCCTTTCAGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: LSCKIWSLHLDHLACHHPILKMS*LPFSGL
Trigger: CAGGCCGCTGAAAGGCAACAATGACATTTTAAGTAT...TGGATGATGGCATGCTAGATGGTCCAAGTGCAATGACCAGATTTTGCAACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTCCTTTGGCCTGCTCTaGGTATGCTTCAACAAGCTC +
Preference number: 5 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFSFGLL*VCFNKL
Trigger: GAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTGCAAACAAGGCTGCCTaGGCATTGGCAGTATCAAAA +
Preference number: 5 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFANKAA*ALAVSK
Trigger: TTTTGATACTGCCAATGCCAAGGCAGCCTTGTTTGC...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTATGCCATCATCCATGTaGACATCCAACACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFMPSSM*TSNTWA
Trigger: AGCCCAGGTGTTGGATGTCAACATGGATGATGGCAT...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTATCTGGTCATTGCACTaGGACCATCTAGCATGCCAT +
Preference number: 5 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFIWSLH*DHLACH
Trigger: ATGGCATGCTAGATGGTCCAAGTGCAATGACCAGAT...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTGATGGCACCATGATCTaGGACTTCCAGACTCCTGAA +
Preference number: 5 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFDGTMI*DFQTPE
Trigger: TTCAGGAGTCTGGAAGTCCAAGATCATGGTGCCATC...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCATATGGATGGCAGAGATaGTCTGTGATCAACAGCATT +
Preference number: 5 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPYGWQR*SVINSI
Trigger: AATGCTGTTGATCACAGACAATCTCTGCCATCCATA...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS CCA 90 bp CAGGTGCTGTGGGCCTTTGGAGGGTATTTCCAGCAAAATACGTTTTaGATGTTTGAATTAATCCAAACAGACTTGCCCTTGTGTTATTAT +
Preference number: 5 (lower is better)
Translates to: QVLWAFGGYFQQNTF*MFELIQTDLPLCYY
Trigger: ATAATAACACAAGGGCAAGTCTGTTTGGATTAATTCAAACATCCAAAACGTATTTTGCTGGAAATACCCTCCAAAGGCCCACAGCACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS-3UTR CAA 90 bp CTCCTCTACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTTCGGAAGCAATTAAGTaGCAAAATCTGGTCATTGCA +
Preference number: 5 (lower is better)
Translates to: LLYKVPLNSLRKPEAGKCSEAIK*QNLVIA
Trigger: TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGA...ACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTAGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTAATGGCATACAAGTaGTGTTCCTCCATTCCAGTC +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQALMAYK*CSSIPV
Trigger: GACTGGAATGGAGGAACACAACTTGTATGCCATTAA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCTTAATGGCATACAAGTaGTGTTCCTCCATTCCAGTC +
Preference number: 5 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFLMAYK*CSSIPV
Trigger: GACTGGAATGGAGGAACACAACTTGTATGCCATTAA...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GTTGCTCCTCCAATCAACAATGGAATCCTTATAGCTAATCTCTCCATTTCCTTGTTAATGGCATACAAGTaGTGTTCCTCCATTCCAGTC +
Preference number: 5 (lower is better)
Translates to: VAPPINNGILIANLSISLLMAYK*CSSIPV
Trigger: GACTGGAATGGAGGAACACAACTTGTATGCCATTAA...CAAGGAAATGGAGAGATTAGCTATAAGGATTCCATTGTTGATTGGAGGAGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650888.1
ENST00000651455.1
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTATAACTCGGAAATTATaGCAGCCAAGGACTACTCCA +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAITRKL*QPRTTP
Trigger: TGGAGTAGTCCTTGGCTGCAATAATTTCCGAGTTAT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCATAACTCGGAAATTATaGCAGCCAAGGACTACTCCA +
Preference number: 5 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFITRKL*QPRTTP
Trigger: TGGAGTAGTCCTTGGCTGCAATAATTTCCGAGTTAT...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTGGGTTTTTGAAGTGGTaGCTCCTCCAATCAACAATG +
Preference number: 5 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSGFLKW*LLQSTM
Trigger: CATTGTTGATTGGAGGAGCAACCACTTCAAAAACCC...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCACTGCTGTGTGGGTTTTaGAAGTGGTTGCTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSLLCGF*KWLLLQ
Trigger: TTGGAGGAGCAACCACTTCAAAAACCCACACAGCAG...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTTGTCGTTAAATATCTaGGGAAAGCCTCGATTCGGG +
Preference number: 5 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFLSLNI*GKPRFG
Trigger: CCCGAATCGAGGCTTTCCCAAGATATTTAACGACAA...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TACAAGGTTCCACTAAATAGTCTTCGAAAACCAGAAGCAGGTAAGTGTCAGCCATCTCCACCTACTGTTTaGTCGTTAAATATCTTGGGA +
Preference number: 5 (lower is better)
Translates to: YKVPLNSLRKPEAGKCQPSPPTV*SLNILG
Trigger: TCCCAAGATATTTAACGACAAAACAGTAGGTGGAGA...TGGCTGACACTTACCTGCTTCTGGTTTTCGAAGACTATTTAGTGGAACCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTCTGAAGCAGGTGCCATaGCTAATGATTCTGTTAACC +
Preference number: 5 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSLKQVP*LMILLT
Trigger: GGTTAACAGAATCATTAGCAATGGCACCTGCTTCAG...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTCTCACAGTATCATTTaGTCACAGGGTCACACTTCT +
Preference number: 5 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGSHSII*SQGHTS
Trigger: AGAAGTGTGACCCTGTGACAAAATGATACTGTGAGA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTAAGATGGTTCTTCATTaGTTCCTCCCTTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAKMVLH*FLPCFF
Trigger: GAAGAAGCAAGGGAGGAACAAATGAAGAACCATCTT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GAAATGATGAGAACCTTAACCAGGGCAGGCGTAGAGATGAACTTAAGACCTATCTCTCACTTCAAGTGTTaGCTTAATATAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: EMMRTLTRAGVEMNLRPISHFKC*LNISLE
Trigger: CTCAAGGCTTATATTAAGCAAACACTTGAAGTGAGA...GATAGGTCTTAAGTTCATCTCTACGCCTGCCCTGGTTAAGGTTCTCATCATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CTGTCCCTAGAGGATCTGCTCAATTCAAGACAACCTTTACTGAGCACCTATCATTCTCACTTCAAGTGTTaGCTTAATATAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: LSLEDLLNSRQPLLSTYHSHFKC*LNISLE
Trigger: CTCAAGGCTTATATTAAGCAAACACTTGAAGTGAGA...ATGATAGGTGCTCAGTAAAGGTTGTCTTGAATTGAGCAGATCCTCTAGGGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp ATGATGAGTTTAGCAAACTTCCTTGATCCTGCAACATTACAGCGCTCTCCAATGGTATTCCTTATGGATTaGGTAAATGACATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: MMSLANFLDPATLQRSPMVFLMD*VNDIRL
Trigger: CAGCCTGATGTCATTTACCAAATCCATAAGGAATAC...CATTGGAGAGCGCTGTAATGTTGCAGGATCAAGGAAGTTTGCTAAACTCATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000650888.1
CDS-3UTR CAA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTAAATCCTTTAGGTGCTaGGCCATCATAGAAGGCGTT +
Preference number: 5 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSKSFRC*AIIEGV
Trigger: AACGCCTTCTATGATGGCCAAGCACCTAAAGGATTT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTCCAATGTTAACAAAGTaGGTGTACGGTCCAATCCTG +
Preference number: 5 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFPMLTK*VYGPIL
Trigger: CAGGATTGGACCGTACACCAACTTTGTTAACATTGG...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTATTTCCACCTGCACTTaGGCAACACACAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFISTCT*ATHKAS
Trigger: AGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAAT...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTATGGATGGCAGAGATaGTCTGTGATCAACAGCATT +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAYGWQR*SVINSI
Trigger: AATGCTGTTGATCACAGACAATCTCTGCCATCCATA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366577.10
ENST00000674797.2
CDS TCA 90 bp GTGACCTGTATGTCTGTTTATGTTGTCTTTTCTTCCTCCTCTTCATaGGTGTCCTGGGTAAATTTTGTGTATGAGGTTCTGGATAATGCT +
Preference number: 5 (lower is better)
Translates to: VTCMSVYVVFSSSSS*VSWVNFVYEVLDNA
Trigger: AGCATTATCCAGAACCTCATACACAAAATTTACCCAGGACACTCATGAAGAGGAGGAAGAAAAGACAACATAAACAGACATACAGGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652483.1
CDS-3UTR CAA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGGGTCCTTCAATTATATaGAGAGGTCGGGGATATTTT +
Preference number: 5 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGGPSII*RGRGYF
Trigger: AAAATATCCCCGACCTCTCAATATAATTGAAGGACC...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000650888.1
ENST00000674797.2
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTCTCCACCTACTGTTTaGTCGTTAAATATCTTGGGA +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQASPPTV*SLNILG
Trigger: TCCCAAGATATTTAACGACAAAACAGTAGGTGGAGA...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCAGGCCCGGAGTTTCTTTaGACTAATCAGTGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSGPEFL*TNQCVQ
Trigger: CTGAACACACTGATTAGTCAAAAGAAACTCCGGGCC...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTCTCACAGTATCATTTaGTCACAGGGTCACACTTCT +
Preference number: 5 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSSHSII*SQGHTS
Trigger: AGAAGTGTGACCCTGTGACAAAATGATACTGTGAGA...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCTCCTCAAAAAGATTTaGGAGTGCAAACAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFLLKKI*ECKQGC
Trigger: GCAGCCTTGTTTGCACTCCAAAATCTTTTTGAGGAG...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp GACTTTTGTTGCATGGATAAAATTAATGGCATACAAGTTGTGTTCCTCCATTCCAAATCCTTTAGGTGCTaGGCCATCATAGAAGGCGTT +
Preference number: 5 (lower is better)
Translates to: DFCCMDKINGIQVVFLHSKSFRC*AIIEGV
Trigger: AACGCCTTCTATGATGGCCAAGCACCTAAAGGATTT...GGAATGGAGGAACACAACTTGTATGCCATTAATTTTATCCATGCAACAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463959.1
ENST00000651455.1
CDS CCA 90 bp GTTGTACTGCTCATTACCTTTGATGACTTTAGCCACTCAATAACCTaGGCTATGCTTTGTAATTTAACTGGAGAGGACTATCAGCTAATT +
Preference number: 5 (lower is better)
Translates to: VVLLITFDDFSHSIT*AMLCNLTGEDYQLI
Trigger: AATTAGCTGATAGTCCTCTCCAGTTAAATTACAAAGCATAGCCCAGGTTATTGAGTGGCTAAAGTCATCAAAGGTAATGAGCAGTACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681937.1
CDS-3UTR CAA 90 bp TTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTTTAATGGCATACAAGTaGTGTTCCTCCATTCCAGTC +
Preference number: 5 (lower is better)
Translates to: FLTVSFCHRVTLLYSTQFLMAYK*CSSIPV
Trigger: GACTGGAATGGAGGAACACAACTTGTATGCCATTAA...AAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
CDS-3UTR CAA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCATTGTCGTTAAATATCTaGGGAAAGCCTCGATTCGGG +
Preference number: 5 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSLSLNI*GKPRFG
Trigger: CCCGAATCGAGGCTTTCCCAAGATATTTAACGACAA...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp TTGCTTGAGTGGTGGCACCATTCTTCATTACTGAATATATTGAGAATTGAGGGGTCTCACTTCAAGTGTTaGCTTAATATAAGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: LLEWWHHSSLLNILRIEGSHFKC*LNISLE
Trigger: CTCAAGGCTTATATTAAGCAAACACTTGAAGTGAGA...CCCCTCAATTCTCAATATATTCAGTAATGAAGAATGGTGCCACCACTCAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp ACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTAAGCCCTATTTCCTCTaGTGTAGTCTTCACTATTTT +
Preference number: 5 (lower is better)
Translates to: TVSFCHRVTLLYSTQFQAKPYFL*CSLHYF
Trigger: AAAATAGTGAAGACTACACAAGAGGAAATAGGGCTT...AGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp CATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTTCTTCAAGCCCTATTTCCTCTaGTGTAGTCTTCACTATTTT +
Preference number: 5 (lower is better)
Translates to: HFVTGSHFSIQLSFRLFFKPYFL*CSLHYF
Trigger: AAAATAGTGAAGACTACACAAGAGGAAATAGGGCTT...GAAGAAAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS-3UTR CAA 90 bp AGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTTTCAGGCTTTGTATTCCTTATGGATTaGGTAAATGACATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SIILSQGHTSLFNSVSGFVFLMD*VNDIRL
Trigger: CAGCCTGATGTCATTTACCAAATCCATAAGGAATAC...AAAGCCTGAAACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
CDS CCA 90 bp TCTACTACACGGGACAATCCCTTCTTTGGAAATATCCTATTATGTTaGTTTGTTGGTAACAAAGCCTTTATAGTCCCCTTAGTAGAGAAA +
Preference number: 5 (lower is better)
Translates to: STTRDNPFFGNILLC*FVGNKAFIVPLVEK
Trigger: TTTCTCTACTAAGGGGACTATAAAGGCTTTGTTACCAACAAACCAACATAATAGGATATTTCCAAAGAAGGGATTGTCCCGTGTAGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS-3UTR CAA 90 bp CATTTCTCACAGTATCATTTTGTCACAGGGTCACACTTCTCTATTCAACTCAGTAAGCCCTATTTCCTCTaGTGTAGTCTTCACTATTTT +
Preference number: 5 (lower is better)
Translates to: HFSQYHFVTGSHFSIQLSKPYFL*CSLHYF
Trigger: AAAATAGTGAAGACTACACAAGAGGAAATAGGGCTT...ACTGAGTTGAATAGAGAAGTGTGACCCTGTGACAAAATGATACTGTGAGAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS TCA 90 bp CAAATGTTTGTTTCCACCTGTCTTCCCCTTTCAAGGGAAGCCACCTaGCAGTCTATTTTAATAATATGCATAGATATTAACCTACGTTTT +
Preference number: 5 (lower is better)
Translates to: QMFVSTCLPLSREAT*QSILIICIDINLRF
Trigger: AAAACGTAGGTTAATATCTATGCATATTATTAAAATAGACTGTCAGGTGGCTTCCCTTGAAAGGGGAAGACAGGTGGAAACAAACATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 90 bp AAATCAGATGGTAGGTTATGTCTTAAGCTGGCTAGTGGGTATACGTaGATGTTTAATATATTGTTCTTTATACCTCCTGGTGAGTCTAAA +
Preference number: 5 (lower is better)
Translates to: KSDGRLCLKLASGYT*MFNILFFIPPGESK
Trigger: TTTAGACTCACCAGGAGGTATAAAGAACAATATATTAAACATCCACGTATACCCACTAGCCAGCTTAAGACATAACCTACCATCTGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS-3UTR CAA 90 bp TGTATACGTATGCTTAGACTACATATTCTTTGGTTTTGCTTGTTTTTGGGCTCATCGGAAGCAATTAAGTaGCAAAATCTGGTCATTGCA +
Preference number: 5 (lower is better)
Translates to: CIRMLRLHILWFCLFLGSSEAIK*QNLVIA
Trigger: TGCAATGACCAGATTTTGCAACTTAATTGCTTCCGA...TGAGCCCAAAAACAAGCAAAACCAAAGAATATGTAGTCTAAGCATACGTATACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366576.3
ENST00000366577.10
ENST00000674797.2
CDS GCA 72 bp CGCCCTAGGGCCTCTCTCGGGGCTGGGCGCGGCAACTaGTGGAGCACGTGCTTTCTTCCCGGGTACCCGGCC +
Preference number: 6 (lower is better)
Translates to: RPRASLGAGRGN*WSTCFLPGYPA
Trigger: GGCCGGGTACCCGGGAAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCCAGCCCCGAGAGAGGCCCTAGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS TCA 72 bp CAGAGGGCGCGGCAGAGAAGACGTGCTCTCCACAGGTaGCGACGGCCAAGGGCCACGCCAGCCAGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: QRARQRRRALHR*RRPRATPASAR
Trigger: CCTGGCGCTGGCTGGCGTGGCCCTTGGCCGTCGTCACCTGTGGAGAGCACGTCTTCTCTGCCGCGCCCTCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS GCA 72 bp CTGGCCTCTGTCCTCAGCCCCTCGGCGCAATGCCTCTaGCTTACCTCTGCCAGCCGGTCCCCCAGCGCCTTG +
Preference number: 6 (lower is better)
Translates to: LASVLSPSAQCL*LTSASRSPSAL
Trigger: CAAGGCGCTGGGGGACCGGCTGGCAGAGGTAAGGCAGAGGCATTGCGCCGAGGGGCTGAGGACAGAGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp CCTAGGGCCTCTCTCGGGGCTGGGCGCGGCAACTGCTaGAGCACGTGCTTTCTTCCCGGGTACCCGGCCAGT +
Preference number: 6 (lower is better)
Translates to: PRASLGAGRGNC*STCFLPGYPAS
Trigger: ACTGGCCGGGTACCCGGGAAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCCAGCCCCGAGAGAGGCCCTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS GCA 72 bp TCTCCTCCTTGCGCAGAGGGCGCGGCAGAGAAGACGTaGTCTCCACAGGTGACGACGGCCAAGGGCCACGCC +
Preference number: 6 (lower is better)
Translates to: SPPCAEGAAEKT*SPQVTTAKGHA
Trigger: GGCGTGGCCCTTGGCCGTCGTCACCTGTGGAGAGCACGTCTTCTCTGCCGCGCCCTCTGCGCAAGGAGGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS GCA 72 bp TCTCTCGGGGCTGGGCGCGGCAACTGCTGGAGCACGTaGTTTCTTCCCGGGTACCCGGCCAGTCCTTGGTGT +
Preference number: 6 (lower is better)
Translates to: SLGAGRGNCWST*FLPGYPASPWC
Trigger: ACACCAAGGACTGGCCGGGTACCCGGGAAGAAAGCACGTGCTCCAGCAGTTGCCGCGCCCAGCCCCGAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS GCA 72 bp CCTCAGCCCCTCGGCGCAATGCCTCTGCCTTACCTCTaGCAGCCGGTCCCCCAGCGCCTTGACCATGATGCT +
Preference number: 6 (lower is better)
Translates to: PQPLGAMPLPYL*QPVPQRLDHDA
Trigger: AGCATCATGGTCAAGGCGCTGGGGGACCGGCTGGCAGAGGTAAGGCAGAGGCATTGCGCCGAGGGGCTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS GCA 72 bp CAGTGGCCCATGGCCCTGGGGCAGCAGGGCGGACCCTaGAGTAGCCCATGCCAGAGGTTAAAGCGGCCACTA +
Preference number: 6 (lower is better)
Translates to: QWPMALGQQGGP*SSPCQRLKRPL
Trigger: TAGTGGCCGCTTTAACCTCTGGCATGGGCTACTGCAGGGTCCGCCCTGCTGCCCCAGGGCCATGGGCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 72 bp AGCACGTGCTTTCTTCCCGGGTACCCGGCCAGTCCTTaGTGTCGGCCTAGCAGCCAGACACGCGCGGCCAGA +
Preference number: 6 (lower is better)
Translates to: STCFLPGYPASP*CRPSSQTRAAR
Trigger: TCTGGCCGCGCGTGTCTGGCTGCTAGGCCGACACCAAGGACTGGCCGGGTACCCGGGAAGAAAGCACGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366577.10
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS CAA 72 bp CCGGGTTGCGACAGGTCTTGGAGCGCGGGTGACATGTaGTCGAGTCTCCTCCTTGCGCAGAGGGCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: PGCDRSWSAGDM*SSLLLAQRARQ
Trigger: CTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
CDS CCA 72 bp GCGATGCCCAGGCCATGTGCTGCCTGCCATGTGGGGTaGGGTCAAGGGTCATACAGGAGCCGGCTGAGGACA +
Preference number: 6 (lower is better)
Translates to: AMPRPCAACHVG*GQGSYRSRLRT
Trigger: TGTCCTCAGCCGGCTCCTGTATGACCCTTGACCCCACCCCACATGGCAGGCAGCACATGGCCTGGGCATCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 72 bp TCGGGTTGCGACAGGTCTTGGAGCGCGGGTGACATGTaGTCGAGTCTCCTCCTTGCGCAGAGGGCGCGGCAG +
Preference number: 6 (lower is better)
Translates to: SGCDRSWSAGDM*SSLLLAQRARQ
Trigger: CTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000650888.1
ENST00000680454.1
CDS CAA 72 bp CTTGGAGCGCGGGTGACATGTTGTCGAGTCTCCTCCTaGCGCAGAGGGCGCGGCAGAGAAGACGTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: LGARVTCCRVSS*RRGRGREDVLS
Trigger: GGAGAGCACGTCTTCTCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS CAA 90 bp GCGACAGGTCTTGGAGCGCGGGTGACATGTTGTCGAGTCTCCTCCTaGCGCAGAGGGCGCGGCAGAGAAGACGTGCTCTCCACAGGTGAC +
Preference number: 6 (lower is better)
Translates to: ATGLGARVTCCRVSS*RRGRGREDVLSTGD
Trigger: GTCACCTGTGGAGAGCACGTCTTCTCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000650888.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000680454.1
CDS TCA 72 bp CAGACCTTCGGGTTGCGACAGGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCTCCTTGCGCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: QTFGLRQVLERG*HVVESPPCAEG
Trigger: GCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGAAGGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000650888.1
ENST00000680454.1
CDS TCA 72 bp AGTGATCCTCCCGCCTCATCCTCCCGAGTAGCTGGCTaGAGAAGTACAGGCCTGCACTCCCCAGTGCACGGC +
Preference number: 6 (lower is better)
Translates to: SDPPASSSRVAG*RSTGLHSPVHG
Trigger: GCCGTGCACTGGGGAGTGCAGGCCTGTACTTCTTCAGCCAGCTACTCGGGAGGATGAGGCGGGAGGATCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS TCA 72 bp CTTCAGACCGGGTTGCGACAGGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCTCCTTGCGCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: LQTGLRQVLERG*HVVESPPCAEG
Trigger: GCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGGTCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679569.1
CDS CAA 90 bp TTCAGACCTTCGGGTTGCGACAGGTCTTGGAGCGCGGGTGACATGTaGTCGAGTCTCCTCCTTGCGCAGAGGGCGCGGCAGAGAAGACGT +
Preference number: 6 (lower is better)
Translates to: FRPSGCDRSWSAGDM*SSLLLAQRARQRRR
Trigger: ACGTCTTCTCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000650888.1
ENST00000680454.1
CDS CAA 90 bp GCAAGTATTCCGGGTTGCGACAGGTCTTGGAGCGCGGGTGACATGTaGTCGAGTCTCCTCCTTGCGCAGAGGGCGCGGCAGAGAAGACGT +
Preference number: 6 (lower is better)
Translates to: ASIPGCDRSWSAGDM*SSLLLAQRARQRRR
Trigger: ACGTCTTCTCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGGAATACTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652435.1
ENST00000674797.2
CDS CAA 90 bp TTCTTCAGACCGGGTTGCGACAGGTCTTGGAGCGCGGGTGACATGTaGTCGAGTCTCCTCCTTGCGCAGAGGGCGCGGCAGAGAAGACGT +
Preference number: 6 (lower is better)
Translates to: FFRPGCDRSWSAGDM*SSLLLAQRARQRRR
Trigger: ACGTCTTCTCTGCCGCGCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGGTCTGAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679569.1
CDS CCA 72 bp GGTGGCGCCTTCTCTCCCTCGTCCTCACAGATGGCTTaGGCTTGGGCGTGTGACTGGTCACTTCTTGGGCAT +
Preference number: 6 (lower is better)
Translates to: GGAFSPSSSQMA*AWACDWSLLGH
Trigger: ATGCCCAAGAAGTGACCAGTCACACGCCCAAGCCCAAGCCATCTGTGAGGACGAGGGAGAGAAGGCGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp CCCATGGTGGCGCCTTCTCTCCCTCGTCCTCACAGATaGCTTGGGCTTGGGCGTGTGACTGGTCACTTCTTG +
Preference number: 6 (lower is better)
Translates to: PMVAPSLPRPHR*LGLGRVTGHFL
Trigger: CAAGAAGTGACCAGTCACACGCCCAAGCCCAAGCCATCTGTGAGGACGAGGGAGAGAAGGCGCCACCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS TCA 72 bp AAGTATTCCGGGTTGCGACAGGTCTTGGAGCGCGGGTaGCATGTTGTCGAGTCTCCTCCTTGCGCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: KYSGLRQVLERG*HVVESPPCAEG
Trigger: GCCCTCTGCGCAAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGGAATACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000652435.1
ENST00000674797.2
CDS GCA 72 bp CTTCTGCAAAGGCCTTGGGACCCAAAGCAGCAGGCATaGTTAGGCAGACGCAGGGGCTCACAGCATCAGTGC +
Preference number: 6 (lower is better)
Translates to: LLQRPWDPKQQA*LGRRRGSQHQC
Trigger: GCACTGATGCTGTGAGCCCCTGCGTCTGCCTAAGCATGCCTGCTGCTTTGGGTCCCAAGGCCTTTGCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp CCCCAGCCAGCAAGTATTCCGGGTTGCGACAGGTCTTaGAGCGCGGGTGACATGTTGTCGAGTCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: PQPASIPGCDRS*SAGDMLSSLLL
Trigger: AAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGGAATACTTGCTGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652435.1
ENST00000674797.2
CDS TCA 72 bp AAAACCGGCAGAGGAGGACGACGTGACATCCGGCTCTaGGCCCCGCAGACATTTAGAACCTTTCAGAGCGCG +
Preference number: 6 (lower is better)
Translates to: KTGRGGRRDIRL*APQTFRTFQSA
Trigger: CGCGCTCTGAAAGGTTCTAAATGTCTGCGGGGCTCAGAGCCGGATGTCACGTCGTCCTCCTCTGCCGGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366577.10
ENST00000674797.2
ENST00000680454.1
CDS GCA 72 bp GGCACACAGGAATGTCACAGAGCTCAGGGACAGCTGTaGATGGGGAAGCCGTTTTCCAGGTATACTCGGCCC +
Preference number: 6 (lower is better)
Translates to: GTQECHRAQGQL*MGKPFSRYTRP
Trigger: GGGCCGAGTATACCTGGAAAACGGCTTCCCCATGCACAGCTGTCCCTGAGCTCTGTGACATTCCTGTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp TGGCCCAAGGTCAGACAGTGGGAGGGGCCAGGGGGCTaGTACCACAACCCATGCGTCTACATATATGGTACT +
Preference number: 6 (lower is better)
Translates to: WPKVRQWEGPGG*YHNPCVYIYGT
Trigger: AGTACCATATATGTAGACGCATGGGTTGTGGTACCAGCCCCCTGGCCCCTCCCACTGTCTGACCTTGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp CGCAGGGTTTTCTTCAGACCGGGTTGCGACAGGTCTTaGAGCGCGGGTGACATGTTGTCGAGTCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: RRVFFRPGCDRS*SAGDMLSSLLL
Trigger: AAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGGTCTGAAGAAAACCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679569.1
CDS CCA 72 bp CAAGGTCACTCCGTGAGTCAGAGTCAGGAGCCACGTTaGGATGAGAACCCCGAGCTCCAGGCTCCCAATATG +
Preference number: 6 (lower is better)
Translates to: QGHSVSQSQEPR*DENPELQAPNM
Trigger: CATATTGGGAGCCTGGAGCTCGGGGTTCTCATCCCAACGTGGCTCCTGACTCTGACTCACGGAGTGACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 90 bp CTGGGTCCCAATAAACGTGGGCTTCACTACAGGAGAGAAGTATGGTaGTCAATGCTGACGCTGGCACCCTGCCTGATGGAGGCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: LGPNKRGLHYRREVW*SMLTLAPCLMEASL
Trigger: CAGGGAGGCCTCCATCAGGCAGGGTGCCAGCGTCAGCATTGACAACCATACTTCTCTCCTGTAGTGAAGCCCACGTTTATTGGGACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS TCA 72 bp TCACTCCGTGAGTCAGAGTCAGGAGCCACGTTGGGATaGGAACCCCGAGCTCCAGGCTCCCAATATGGCATT +
Preference number: 6 (lower is better)
Translates to: SLRESESGATLG*EPRAPGSQYGI
Trigger: AATGCCATATTGGGAGCCTGGAGCTCGGGGTTCTCATCCCAACGTGGCTCCTGACTCTGACTCACGGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 72 bp ACACCTTCCATACCTGTTGCCTTAACCCATAGAAGGTaGCTATGGGCTCTGCAGCCTGGGGCACAGCAGCCT +
Preference number: 6 (lower is better)
Translates to: TPSIPVALTHRR*LWALQPGAQQP
Trigger: AGGCTGCTGTGCCCCAGGCTGCAGAGCCCATAGCCACCTTCTATGGGTTAAGGCAACAGGTATGGAAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp GCCTTCTCTCCCTCGTCCTCACAGATGGCTTGGGCTTaGGCGTGTGACTGGTCACTTCTTGGGCATGTGATT +
Preference number: 6 (lower is better)
Translates to: AFSPSSSQMAWA*ACDWSLLGHVI
Trigger: AATCACATGCCCAAGAAGTGACCAGTCACACGCCCAAGCCCAAGCCATCTGTGAGGACGAGGGAGAGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp CCCTGCGCCACAGGAGAGAGAGATCACAGAGCCCCATaGTACCTTCGAAGAGACAGCAATCAGAGCCTACTC +
Preference number: 6 (lower is better)
Translates to: PCATGERDHRAP*YLRRDSNQSLL
Trigger: GAGTAGGCTCTGATTGCTGTCTCTTCGAAGGTACCATGGGGCTCTGTGATCTCTCTCTCCTGTGGCGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 72 bp CTCTCCATCAACAGCAGCAGCTCAAACAACAAACTGTaGGGGTCAGCGATGCCCAGGCCATGTGCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: LSINSSSSNNKL*GSAMPRPCAAC
Trigger: GCAGGCAGCACATGGCCTGGGCATCGCTGACCCCAACAGTTTGTTGTTTGAGCTGCTGCTGTTGATGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS GCA 72 bp GAGAGTTACCTCCTCGGCAGCTTTTCTGGCCACTCCTaGAGAGCACATGTTCATCCGGTAGGCCAAGTGTTC +
Preference number: 6 (lower is better)
Translates to: ESYLLGSFSGHS*RAHVHPVGQVF
Trigger: GAACACTTGGCCTACCGGATGAACATGTGCTCTGCAGGAGTGGCCAGAAAAGCTGCCGAGGAGGTAACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
CDS GCA 72 bp GTGAGGAGGGGCTGGAACTTAACATTAGAACCCCAGTaGCTTATATTCTGTGGCGTCCGAGCCTGGGCGCAT +
Preference number: 6 (lower is better)
Translates to: VRRGWNLTLEPQ*LIFCGVRAWAH
Trigger: ATGCGCCCAGGCTCGGACGCCACAGAATATAAGGCACTGGGGTTCTAATGTTAAGTTCCAGCCCCTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS GCA 72 bp CCACAGTTCTCGGCGAACTCTTTCATGGAGCTCTTCTaGAAAGGCCTTGGGACCCAAAGCAGCAGGCATGCT +
Preference number: 6 (lower is better)
Translates to: PQFSANSFMELF*KGLGTQSSRHA
Trigger: AGCATGCCTGCTGCTTTGGGTCCCAAGGCCTTTGCAGAAGAGCTCCATGAAAGAGTTCGCCGAGAACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp AGGGTTTTCTTCAGACCTTCGGGTTGCGACAGGTCTTaGAGCGCGGGTGACATGTTGTCGAGTCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: RVFFRPSGCDRS*SAGDMLSSLLL
Trigger: AAGGAGGAGACTCGACAACATGTCACCCGCGCTCCAAGACCTGTCGCAACCCGAAGGTCTGAAGAAAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000680454.1
CDS CCA 72 bp CACAGGAATGTCACAGAGCTCAGGGACAGCTGTGCATaGGGAAGCCGTTTTCCAGGTATACTCGGCCCATCA +
Preference number: 6 (lower is better)
Translates to: HRNVTELRDSCA*GSRFPGILGPS
Trigger: TGATGGGCCGAGTATACCTGGAAAACGGCTTCCCCATGCACAGCTGTCCCTGAGCTCTGTGACATTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp GGTCAATCCAAAGCTCCACGGGCCAGAAAGAGCAGCTaGGACCATACAGCTGCTAGTTCCTCCACTGTTCAC +
Preference number: 6 (lower is better)
Translates to: GQSKAPRARKSS*DHTAASSSTVH
Trigger: GTGAACAGTGGAGGAACTAGCAGCTGTATGGTCCCAGCTGCTCTTTCTGGCCCGTGGAGCTTTGGATTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 90 bp CCCATCCCTCCATCCAGCACCATAATCCTCTTCTGCAGAATGGCATaGATCTCATCCCGCAGGGTTTTCTTCAGACCGGGTTGCGACAGG +
Preference number: 6 (lower is better)
Translates to: PIPPSSTIILFCRMA*ISSRRVFFRPGCDR
Trigger: CCTGTCGCAACCCGGTCTGAAGAAAACCCTGCGGGATGAGATCAATGCCATTCTGCAGAAGAGGATTATGGTGCTGGATGGAGGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679569.1
CDS TCA 72 bp TCCCTCGTCCTCACAGATGGCTTGGGCTTGGGCGTGTaGCTGGTCACTTCTTGGGCATGTGATTGGTCATTT +
Preference number: 6 (lower is better)
Translates to: SLVLTDGLGLGV*LVTSWACDWSF
Trigger: AAATGACCAATCACATGCCCAAGAAGTGACCAGTCACACGCCCAAGCCCAAGCCATCTGTGAGGACGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS TCA 72 bp CTCCAGGATTCCCAGCTGAGGTACTGGAGTGCTGACTaGAGCCCTTCTCCCTGGGTCTTGAATTCCAACTCT +
Preference number: 6 (lower is better)
Translates to: LQDSQLRYWSAD*SPSPWVLNSNS
Trigger: AGAGTTGGAATTCAAGACCCAGGGAGAAGGGCTTCAGTCAGCACTCCAGTACCTCAGCTGGGAATCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652483.1
CDS GCA 72 bp GCAGGATTAGGCTGGAGTCTAAGGTGTTGGCTCCATTaGCGTATCCGAGCCTTCCTGTCTCTCTACTTCCTG +
Preference number: 6 (lower is better)
Translates to: AGLGWSLRCWLH*RIRAFLSLYFL
Trigger: CAGGAAGTAGAGAGACAGGAAGGCTCGGATACGGCAATGGAGCCAACACCTTAGACTCCAGCCTAATCCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 72 bp TCGTCCTCACAGATGGCTTGGGCTTGGGCGTGTGACTaGTCACTTCTTGGGCATGTGATTGGTCATTTGGGA +
Preference number: 6 (lower is better)
Translates to: SSSQMAWAWACD*SLLGHVIGHLG
Trigger: TCCCAAATGACCAATCACATGCCCAAGAAGTGACCAGTCACACGCCCAAGCCCAAGCCATCTGTGAGGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp GTTGGGATGAGAACCCCGAGCTCCAGGCTCCCAATATaGCATTCTTTCCACCAAACCACGCTGAACTCAGCA +
Preference number: 6 (lower is better)
Translates to: VGMRTPSSRLPI*HSFHQTTLNSA
Trigger: TGCTGAGTTCAGCGTGGTTTGGTGGAAAGAATGCCATATTGGGAGCCTGGAGCTCGGGGTTCTCATCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 72 bp TCTGACATGGCAGGATTAGGCTGGAGTCTAAGGTGTTaGCTCCATTGCCGTATCCGAGCCTTCCTGTCTCTC +
Preference number: 6 (lower is better)
Translates to: SDMAGLGWSLRC*LHCRIRAFLSL
Trigger: GAGAGACAGGAAGGCTCGGATACGGCAATGGAGCCAACACCTTAGACTCCAGCCTAATCCTGCCATGTCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 72 bp GGCAGGATTAGGCTGGAGTCTAAGGTGTTGGCTCCATaGCCGTATCCGAGCCTTCCTGTCTCTCTACTTCCT +
Preference number: 6 (lower is better)
Translates to: GRIRLESKVLAP*PYPSLPVSLLP
Trigger: AGGAAGTAGAGAGACAGGAAGGCTCGGATACGGCAATGGAGCCAACACCTTAGACTCCAGCCTAATCCTGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 90 bp CCCATCCCTCCATCCAGCACCATAATCCTCTTCTGCAGAATGGCATaGATCTCATCCCGCAGGGTTTTCTTCAGACCTTCGGGTTGCGAC +
Preference number: 6 (lower is better)
Translates to: PIPPSSTIILFCRMA*ISSRRVFFRPSGCD
Trigger: GTCGCAACCCGAAGGTCTGAAGAAAACCCTGCGGGATGAGATCAATGCCATTCTGCAGAAGAGGATTATGGTGCTGGATGGAGGGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
CDS TCA 72 bp CAGACTGTAGTGTGGTCTGCACCTCAGACTCTGGTCTaGCATGGCAGGATTAGGCTGGAGTCTAAGGTGTTG +
Preference number: 6 (lower is better)
Translates to: QTVVWSAPQTLV*HGRIRLESKVL
Trigger: CAACACCTTAGACTCCAGCCTAATCCTGCCATGTCAGACCAGAGTCTGAGGTGCAGACCACACTACAGTCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS GCA 72 bp GTCCCCATCCCTCCATCCAGCACCATAATCCTCTTCTaGAGAATGGCATTGATCTCATCCCGCAGGGTTTTC +
Preference number: 6 (lower is better)
Translates to: VPIPPSSTIILF*RMALISSRRVF
Trigger: GAAAACCCTGCGGGATGAGATCAATGCCATTCTGCAGAAGAGGATTATGGTGCTGGATGGAGGGATGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000679569.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
CDS CCA 72 bp CCACCTGAGACAGCAGCAATGGTCCTCGCCCATCCATaGAACACAATATTAAACGCCTCACTCCTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: PPETAAMVLAHP*NTILNASLLLS
Trigger: ACTCAGCAGGAGTGAGGCGTTTAATATTGTGTTCCATGGATGGGCGAGGACCATTGCTGCTGTCTCAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp TGGGGATATGTACAGGCTGGGCTCTCCTCTCTATATTaGGGGGCCCAGCACAATCTCCATCATCCTTCATCT +
Preference number: 6 (lower is better)
Translates to: WGYVQAGLSSLY*GAQHNLHHPSS
Trigger: AGATGAAGGATGATGGAGATTGTGCTGGGCCCCCCAATATAGAGAGGAGAGCCCAGCCTGTACATATCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp CCCAATAAACGTGGGCTTCACTACAGGAGAGAAGTATaGTTGTCAATGCTGACGCTGGCACCCTGCCTGATG +
Preference number: 6 (lower is better)
Translates to: PNKRGLHYRREV*LSMLTLAPCLM
Trigger: CATCAGGCAGGGTGCCAGCGTCAGCATTGACAACCATACTTCTCTCCTGTAGTGAAGCCCACGTTTATTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 72 bp AGCTCGTTGCCCGCCGTGGAAGCAAGTACAGCTTCATaGACACAGGGCAGGAAATTGTTAAGTACAGGCGAG +
Preference number: 6 (lower is better)
Translates to: SSLPAVEASTAS*TQGRKLLSTGE
Trigger: CTCGCCTGTACTTAACAATTTCCTGCCCTGTGTCAATGAAGCTGTACTTGCTTCCACGGCGGGCAACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 72 bp ATCAATGAGTGGCCAACCCACACACTTCACAGCTCGTaGCCCGCCGTGGAAGCAAGTACAGCTTCATTGACA +
Preference number: 6 (lower is better)
Translates to: INEWPTHTLHSS*PAVEASTASLT
Trigger: TGTCAATGAAGCTGTACTTGCTTCCACGGCGGGCAACGAGCTGTGAAGTGTGTGGGTTGGCCACTCATTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 90 bp GATCAATTAATCAATGAGTGGCCAACCCACACACTTCACAGCTCGTaGCCCGCCGTGGAAGCAAGTACAGCTTCATTGACACAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: DQLINEWPTHTLHSS*PAVEASTASLTQGR
Trigger: CCTGCCCTGTGTCAATGAAGCTGTACTTGCTTCCACGGCGGGCAACGAGCTGTGAAGTGTGTGGGTTGGCCACTCATTGATTAATTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 90 bp CCCGCCGTGGAAGCAAGTACAGCTTCATTGACACAGGGCAGGAAATaGTTAAGTACAGGCGAGGAGGTGTTTGGTAATGGCACACAGGAA +
Preference number: 6 (lower is better)
Translates to: PAVEASTASLTQGRK*LSTGEEVFGNGTQE
Trigger: TTCCTGTGTGCCATTACCAAACACCTCCTCGCCTGTACTTAACAATTTCCTGCCCTGTGTCAATGAAGCTGTACTTGCTTCCACGGCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 90 bp ACACTTCACAGCTCGTTGCCCGCCGTGGAAGCAAGTACAGCTTCATaGACACAGGGCAGGAAATTGTTAAGTACAGGCGAGGAGGTGTTT +
Preference number: 6 (lower is better)
Translates to: TLHSSLPAVEASTAS*TQGRKLLSTGEEVF
Trigger: AAACACCTCCTCGCCTGTACTTAACAATTTCCTGCCCTGTGTCAATGAAGCTGTACTTGCTTCCACGGCGGGCAACGAGCTGTGAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS GCA 72 bp CAAATGAAGTCCCAAATTCAGGACTGCTGTGCTTTCTaGAGGGGAGGAAGGGACACATGTGGGACTTCCGAT +
Preference number: 6 (lower is better)
Translates to: QMKSQIQDCCAF*RGGRDTCGTSD
Trigger: ATCGGAAGTCCCACATGTGTCCCTTCCTCCCCTGCAGAAAGCACAGCAGTCCTGAATTTGGGACTTCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 72 bp CCATTTTACAGACAAGAAATCAGGGGCATAGGAAGCTaGATCAACTGGCCCAAGGTCAGACAGTGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: PFYRQEIRGIGS*INWPKVRQWEG
Trigger: CCCCTCCCACTGTCTGACCTTGGGCCAGTTGATCAAGCTTCCTATGCCCCTGATTTCTTGTCTGTAAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 72 bp AATAAACGTGGGCTTCACTACAGGAGAGAAGTATGGTaGTCAATGCTGACGCTGGCACCCTGCCTGATGGAG +
Preference number: 6 (lower is better)
Translates to: NKRGLHYRREVW*SMLTLAPCLME
Trigger: CTCCATCAGGCAGGGTGCCAGCGTCAGCATTGACAACCATACTTCTCTCCTGTAGTGAAGCCCACGTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 90 bp GCTTGGGCGTGTGACTGGTCACTTCTTGGGCATGTGATTGGTCATTaGGGAGGAGGTGAAGCAGACCCTCATTTATGCAAAGCTCTTTTG +
Preference number: 6 (lower is better)
Translates to: AWACDWSLLGHVIGH*GGGEADPHLCKALL
Trigger: CAAAAGAGCTTTGCATAAATGAGGGTCTGCTTCACCTCCTCCCAAATGACCAATCACATGCCCAAGAAGTGACCAGTCACACGCCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 90 bp TGGGTTCGGAAATTATTGCAGCCAAGGACTACTCCAACTATGTTCTaGCCTATGTCGTGCACGTCGCCTTTAACAGTGGCCAGCACGATG +
Preference number: 6 (lower is better)
Translates to: WVRKLLQPRTTPTMF*PMSCTSPLTVASTM
Trigger: CATCGTGCTGGCCACTGTTAAAGGCGACGTGCACGACATAGGCAAGAACATAGTTGGAGTAGTCCTTGGCTGCAATAATTTCCGAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679842.1
CDS TCA 72 bp AGAATGTTCCAGAGTGCACTGGAGGAAAGCCCCTCCTaGGAAATTGCTACCTGGGTAGGTAATGTATGTGCC +
Preference number: 6 (lower is better)
Translates to: RMFQSALEESPS*EIATWVGNVCA
Trigger: GGCACATACATTACCTACCCAGGTAGCAATTTCTCAGGAGGGGCTTTCCTCCAGTGCACTCTGGAACATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS GCA 72 bp TACTCAGAAGAGCAGACTCCCAGAGTAATAAGGCACTaGCACCAGAATGTTCCAGAGTGCACTGGAGGAAAG +
Preference number: 6 (lower is better)
Translates to: YSEEQTPRVIRH*HQNVPECTGGK
Trigger: CTTTCCTCCAGTGCACTCTGGAACATTCTGGTGGCAGTGCCTTATTACTCTGGGAGTCTGCTCTTCTGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp CATCCAACACCTGGGCTCCCATTTCCACCTGCACTTTaGCAACACACAAGGCTTCCAGACAGTAACATATGT +
Preference number: 6 (lower is better)
Translates to: HPTPGLPFPPAL*QHTRLPDSNIC
Trigger: ACATATGTTACTGTCTGGAAGCCTTGTGTGTTGCCAAAGTGCAGGTGGAAATGGGAGCCCAGGTGTTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651455.1
CDS CCA 72 bp CAGGTTGATGTTCCTATAATCCGGCCTTTCCACAGATaGGGACACAGAGAGTGTCTTATTAGTCGGACCCAG +
Preference number: 6 (lower is better)
Translates to: QVDVPIIRPFHR*GHRECLISRTQ
Trigger: CTGGGTCCGACTAATAAGACACTCTCTGTGTCCCCATCTGTGGAAAGGCCGGATTATAGGAACATCAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652435.1
CDS CCA 72 bp AAAGCATCCCAACCGCTGCCAGGTGCTGTGGGCCTTTaGAGGGTATTTCCAGCAAAATACGTTTTGGATGTT +
Preference number: 6 (lower is better)
Translates to: KASQPLPGAVGL*RVFPAKYVLDV
Trigger: AACATCCAAAACGTATTTTGCTGGAAATACCCTCCAAAGGCCCACAGCACCTGGCAGCGGTTGGGATGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 72 bp CCGTTTTCCAGGTATACTCGGCCCATCAATTATTCTTaGCTAACAAAGGCCAGAGGGGGACCCAAAGCTTCC +
Preference number: 6 (lower is better)
Translates to: PFSRYTRPINYS*LTKARGGPKAS
Trigger: GGAAGCTTTGGGTCCCCCTCTGGCCTTTGTTAGCAAAGAATAATTGATGGGCCGAGTATACCTGGAAAACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS TCA 72 bp AAACTGCCTCACACGGCTGTGTGGAAATTAAAAGCATaGCCATCAAGCACCTTACTATGCACCTGGCACCTG +
Preference number: 6 (lower is better)
Translates to: KLPHTAVWKLKA*PSSTLLCTWHL
Trigger: CAGGTGCCAGGTGCATAGTAAGGTGCTTGATGGTCATGCTTTTAATTTCCACACAGCCGTGTGAGGCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS TCA 72 bp CAAGCCATCCATAGCAAAATCCAGAGTGGTTCTCCATaGGACACGCTGATGACAAATCCCTCTCCTGTCTGT +
Preference number: 6 (lower is better)
Translates to: QAIHSKIQSGSP*DTLMTNPSPVC
Trigger: ACAGACAGGAGAGGGATTTGTCATCAGCGTGTCTCATGGAGAACCACTCTGGATTTTGCTATGGATGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650888.1
CDS CAA 90 bp GACCACAGCCAGGGGAAATTTGACAAGAGGAAACAGGCTGGATTCTaGATTGGTTTGTACTTTCATCAGCTGCTGCTCTGCAGCTCAATT +
Preference number: 6 (lower is better)
Translates to: DHSQGKFDKRKQAGF*IGLYFHQLLLCSSI
Trigger: AATTGAGCTGCAGAGCAGCAGCTGATGAAAGTACAAACCAATCAAGAATCCAGCCTGTTTCCTCTTGTCAAATTTCCCCTGGCTGTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 90 bp ATTGCTTCTCGAATGGCTTCCATTCCTCGGAAGGAGAAGGACAAGTaGGAAAGACCTCCACTTATTCTGGCTCCAGGTAATGTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: IASRMASIPRKEKDK*ERPPLILAPGNVSC
Trigger: ACAGGAAACATTACCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCTTCCGAGGAATGGAAGCCATTCGAGAAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681102.1
CDS TCA 72 bp ATTGCCGTATCCGAGCCTTCCTGTCTCTCTACTTCCTaGTTTGTAACCAGGGATCAGGGAACTTCCTATTCT +
Preference number: 6 (lower is better)
Translates to: IAVSEPSCLSTS*FVTRDQGTSYS
Trigger: AGAATAGGAAGTTCCCTGATCCCTGGTTACAAATCAGGAAGTAGAGAGACAGGAAGGCTCGGATACGGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS GCA 72 bp AAGATATCAACCCCGCCATCCAGAAGTCCTTTGGCCTaGTCTTGGTATGCTTCAACAAGCTCATCAAATGTG +
Preference number: 6 (lower is better)
Translates to: KISTPPSRSPLA*SWYASTSSSNV
Trigger: CACATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGATATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
ENST00000679569.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
ENST00000681937.1
CDS GCA 72 bp GAGTCCATCTCAGGATGGTATCTGGCACACAACACCTaGTCCATAAATGGTACCTATTCCCTTTCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: ESISGWYLAHNT*SINGTYSLSFQ
Trigger: CTGGAAAGAAAGGGAATAGGTACCATTTATGGAGCAGGTGTTGTGTGCCAGATACCATCCTGAGATGGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS GCA 72 bp TCAAAGTATAGGCAAATGAAGTCCCAAATTCAGGACTaGTGTGCTTTCTGCAGGGGAGGAAGGGACACATGT +
Preference number: 6 (lower is better)
Translates to: SKYRQMKSQIQD*CAFCRGGRDTC
Trigger: ACATGTGTCCCTTCCTCCCCTGCAGAAAGCACAGCAGTCCTGAATTTGGGACTTCATTTGCCTATACTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 72 bp AAATGTGATGTTCCTATAATCCGGCCTTTCCACAGATaGGGACACAGAGAGTGTCTTATTAGTCGGACCCAG +
Preference number: 6 (lower is better)
Translates to: KCDVPIIRPFHR*GHRECLISRTQ
Trigger: CTGGGTCCGACTAATAAGACACTCTCTGTGTCCCCATCTGTGGAAAGGCCGGATTATAGGAACATCACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
ENST00000679569.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
ENST00000681937.1
CDS CAA 72 bp TGTGACTGGTCACTTCTTGGGCATGTGATTGGTCATTaGGGAGGAGGTGAAGCAGACCCTCATTTATGCAAA +
Preference number: 6 (lower is better)
Translates to: CDWSLLGHVIGH*GGGEADPHLCK
Trigger: TTTGCATAAATGAGGGTCTGCTTCACCTCCTCCCAAATGACCAATCACATGCCCAAGAAGTGACCAGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS TCA 72 bp ACTTCTTGGGCATGTGATTGGTCATTTGGGAGGAGGTaGAGCAGACCCTCATTTATGCAAAGCTCTTTTGTG +
Preference number: 6 (lower is better)
Translates to: TSWACDWSFGRR*SRPSFMQSSFV
Trigger: CACAAAAGAGCTTTGCATAAATGAGGGTCTGCTTCACCTCCTCCCAAATGACCAATCACATGCCCAAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS GCA 72 bp GCACCTTACTATGCACCTGGCACCTGGTATACATTCTaGAAATGTTTGTTTCCACCTGTCTTCCCCTTTCAA +
Preference number: 6 (lower is better)
Translates to: APYYAPGTWYTF*KCLFPPVFPFQ
Trigger: TTGAAAGGGGAAGACAGGTGGAAACAAACATTTGCAGAATGTATACCAGGTGCCAGGTGCATAGTAAGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS GCA 72 bp ACTAGTGCTGCTAAAAGTATTTGTTTCAATGATATCTaGCCCAGCCAGCAAGTATTCCGGGTTGCGACAGGT +
Preference number: 6 (lower is better)
Translates to: TSAAKSICFNDI*PSQQVFRVATG
Trigger: ACCTGTCGCAACCCGGAATACTTGCTGGCTGGGGCAGATATCATTGAAACAAATACTTTTAGCAGCACTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000652435.1
ENST00000674797.2
CDS GCA 72 bp GATTACAGGTGCACTGTATCTCGGAGCTATTTTAACTaGTGTGTGGGTTCGGAAATTATTGCAGCCAAGGAC +
Preference number: 6 (lower is better)
Translates to: DYRCTVSRSYFN*CVGSEIIAAKD
Trigger: GTCCTTGGCTGCAATAATTTCCGAACCCACACAGCAGTTAAAATAGCTCCGAGATACAGTGCACCTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679842.1
CDS CCA 72 bp CATGACCATCAAGCACCTTACTATGCACCTGGCACCTaGTATACATTCTGCAAATGTTTGTTTCCACCTGTC +
Preference number: 6 (lower is better)
Translates to: HDHQAPYYAPGT*YTFCKCLFPPV
Trigger: GACAGGTGGAAACAAACATTTGCAGAATGTATACCAGGTGCCAGGTGCATAGTAAGGTGCTTGATGGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 72 bp GTTTCTGTTGCCTCTCCTTCCTTCAGACTAATGCTATaGACAATGCACTTCCCTTGGCAGCACTTTAACCCA +
Preference number: 6 (lower is better)
Translates to: VSVASPSFRLML*TMHFPWQHFNP
Trigger: TGGGTTAAAGTGCTGCCAAGGGAAGTGCATTGTCAATAGCATTAGTCTGAAGGAAGGAGAGGCAACAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366576.3
CDS CAA 72 bp CATCCGGTAGGCCAAGTGTTCAAGGCCATAGTCAGCTaGGGCAATACTAGTGCTGCTAAAAGTATTTGTTTC +
Preference number: 6 (lower is better)
Translates to: HPVGQVFKAIVS*GNTSAAKSICF
Trigger: GAAACAAATACTTTTAGCAGCACTAGTATTGCCCAAGCTGACTATGGCCTTGAACACTTGGCCTACCGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
CDS TCA 72 bp AAAGCACAATTTAATCCAATGCAGAGTGGTTCTCCATaGGACACGCTGATGACAAATCCCTCTCCTGTCTGT +
Preference number: 6 (lower is better)
Translates to: KAQFNPMQSGSP*DTLMTNPSPVC
Trigger: ACAGACAGGAGAGGGATTTGTCATCAGCGTGTCTCATGGAGAACCACTCTGCATTGGATTAAATTGTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000535889.6
ENST00000651455.1
ENST00000674797.2
ENST00000679569.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
ENST00000681937.1
CDS CCA 72 bp TATCGTCAAATGAGAATAAGCTTCACAACGCACAGATaGCAGCCTGTATTGTGCACTGTTACATCCCCAGTA +
Preference number: 6 (lower is better)
Translates to: YRQMRISFTTHR*QPVLCTVTSPV
Trigger: TACTGGGGATGTAACAGTGCACAATACAGGCTGCCATCTGTGCGTTGTGAAGCTTATTCTCATTTGACGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CCA 72 bp AGGAGAAGGACAAGTTGGAAAGACCTCCACTTATTCTaGCTCCAGGTAATGTTTCCTGTCCTTCTTCATCAA +
Preference number: 6 (lower is better)
Translates to: RRRTSWKDLHLF*LQVMFPVLLHQ
Trigger: TTGATGAAGAAGGACAGGAAACATTACCTGGAGCCAGAATAAGTGGAGGTCTTTCCAACTTGTCCTTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681102.1
CDS CCA 72 bp TCAGGGAACTTCCTATTCTACCAATCTCAGGGGCTCTaGGAGAACACAGAAGCTTCTAGAGTATTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SGNFLFYQSQGL*ENTEASRVFFS
Trigger: AGAGAAAAATACTCTAGAAGCTTCTGTGTTCTCCCAGAGCCCCTGAGATTGGTAGAATAGGAAGTTCCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 72 bp GATGGACTCTCTCGTCTCCCAGAATTTAAGAAATGTTaGAGGTGTTACCATCAGGGCCGTAAAAGAAAACCC +
Preference number: 6 (lower is better)
Translates to: DGLSRLPEFKKC*RCYHQGRKRKP
Trigger: GGGTTTTCTTTTACGGCCCTGATGGTAACACCTCAAACATTTCTTAAATTCTGGGAGACGAGAGAGTCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 72 bp ACCTTTTCATACTTGTTCACGGTAGCCCTTTCCCATTaGTTCCTCATCATCCTTCTACTACACGGGACAATC +
Preference number: 6 (lower is better)
Translates to: TFSYLFTVALSH*FLIILLLHGTI
Trigger: GATTGTCCCGTGTAGTAGAAGGATGATGAGGAACAAATGGGAAAGGGCTACCGTGAACAAGTATGAAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 90 bp GCACATGTTCATCCGGTAGGCCAAGTGTTCAAGGCCATAGTCAGCTaGGGCAATACTAGTGCTGCTAAAAGTATTTGTTTCAATGATATC +
Preference number: 6 (lower is better)
Translates to: AHVHPVGQVFKAIVS*GNTSAAKSICFNDI
Trigger: GATATCATTGAAACAAATACTTTTAGCAGCACTAGTATTGCCCAAGCTGACTATGGCCTTGAACACTTGGCCTACCGGATGAACATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000366577.10
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000652435.1
ENST00000674797.2
ENST00000679569.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
CDS CAA 90 bp ATAGTTTCAATGAGTAAGATATCAACCCCGCCATCCAGAAGTCCTTaGGCCTGCTCTTGGTATGCTTCAACAAGCTCATCAAATGTGATG +
Preference number: 6 (lower is better)
Translates to: IVSMSKISTPPSRSP*ACSWYASTSSSNVM
Trigger: CATCACATTTGATGAGCTTGTTGAAGCATACCAAGAGCAGGCCAAAGGACTTCTGGATGGCGGGGTTGATATCTTACTCATTGAAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000674797.2
ENST00000679569.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
ENST00000681937.1
CDS TCA 72 bp TGGCCCAGTTCCCCTCTCCAGAGGCTACTAAAAAGGTaGACTCTGAGAATTCATTCTATTAAATGCCCTAAT +
Preference number: 6 (lower is better)
Translates to: WPSSPLQRLLKR*TLRIHSIKCPN
Trigger: ATTAGGGCATTTAATAGAATGAATTCTCAGAGTTCACCTTTTTAGTAGCCTCTGGAGAGGGGAACTGGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS TCA 72 bp TGCTCTGCAGCTCAATTTTGGCCTCAACCTGAGCTCTaGAGGACCATACTTAATGACCTAAAGATTTTAGAC +
Preference number: 6 (lower is better)
Translates to: CSAAQFWPQPEL*RTILNDLKILD
Trigger: GTCTAAAATCTTTAGGTCATTAAGTATGGTCCTTCAGAGCTCAGGTTGAGGCCAAAATTGAGCTGCAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS TCA 72 bp ATGGACTCTCTCGTCTCCCAGAATTTAAGAAATGTTTaGGGTGTTACCATCAGGGCCGTAAAAGAAAACCCT +
Preference number: 6 (lower is better)
Translates to: MDSLVSQNLRNV*GVTIRAVKENP
Trigger: AGGGTTTTCTTTTACGGCCCTGATGGTAACACCTCAAACATTTCTTAAATTCTGGGAGACGAGAGAGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CCA 72 bp GGTAGAGATAAAGGCTCTAAGAGCAACAGCCAACTGTaGCACCATTCAAGGTTTTTCTTTGCCTCAAAGATA +
Preference number: 6 (lower is better)
Translates to: GRDKGSKSNSQL*HHSRFFFASKI
Trigger: TATCTTTGAGGCAAAGAAAAACCTTGAATGGTGCCACAGTTGGCTGTTGCTCTTAGAGCCTTTATCTCTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470570.2
CDS CAA 90 bp CATTTGACTTCTTACTCCTGCCTGGAAATCTCTACCTTTTCATACTaGTTCACGGTAGCCCTTTCCCATTTGTTCCTCATCATCCTTCTA +
Preference number: 6 (lower is better)
Translates to: HLTSYSCLEISTFSY*FTVALSHLFLIILL
Trigger: TAGAAGGATGATGAGGAACAAATGGGAAAGGGCTACCGTGAACAAGTATGAAAAGGTAGAGATTTCCAGGCAGGAGTAAGAAGTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS TCA 72 bp TTGTCTACTGACACATATGCTCAAAGTATAGGCAAATaGAGTCCCAAATTCAGGACTGCTGTGCTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: LSTDTYAQSIGK*SPKFRTAVLSA
Trigger: TGCAGAAAGCACAGCAGTCCTGAATTTGGGACTTCATTTGCCTATACTTTGAGCATATGTGTCAGTAGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 72 bp TGTAGCAAGTTGTGTTCATTCCTAAAGAAGCCAGGGTaGTACTGCTCATTACCTTTGATGACTTTAGCCACT +
Preference number: 6 (lower is better)
Translates to: CSKLCSFLKKPG*YCSLPLMTLAT
Trigger: AGTGGCTAAAGTCATCAAAGGTAATGAGCAGTACAACCCTGGCTTCTTTAGGAATGAACACAACTTGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681937.1
CDS GCA 72 bp ACTAGTGCTGCTAAAAGTATTTGTTTCAATGATATCTaGCCCAGCCAGCAAGTATTCCTTATGGATTTGGTA +
Preference number: 6 (lower is better)
Translates to: TSAAKSICFNDI*PSQQVFLMDLV
Trigger: TACCAAATCCATAAGGAATACTTGCTGGCTGGGGCAGATATCATTGAAACAAATACTTTTAGCAGCACTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000366577.10
ENST00000463959.1
ENST00000535889.6
ENST00000650888.1
ENST00000651455.1
ENST00000679569.1
ENST00000679842.1
ENST00000680454.1
ENST00000681102.1
ENST00000681177.1
CDS CCA 72 bp CTCATTACCTTTGATGACTTTAGCCACTCAATAACCTaGGCTATGCTTTGTAATTTAACTGGAGAGGACTAT +
Preference number: 6 (lower is better)
Translates to: LITFDDFSHSIT*AMLCNLTGEDY
Trigger: ATAGTCCTCTCCAGTTAAATTACAAAGCATAGCCCAGGTTATTGAGTGGCTAAAGTCATCAAAGGTAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681937.1
CDS CCA 72 bp CGGGACAATCCCTTCTTTGGAAATATCCTATTATGTTaGTTTGTTGGTAACAAAGCCTTTATAGTCCCCTTA +
Preference number: 6 (lower is better)
Translates to: RDNPFFGNILLC*FVGNKAFIVPL
Trigger: TAAGGGGACTATAAAGGCTTTGTTACCAACAAACCAACATAATAGGATATTTCCAAAGAAGGGATTGTCCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 72 bp CTCATCATCCTTCTACTACACGGGACAATCCCTTCTTaGGAAATATCCTATTATGTTGGTTTGTTGGTAACA +
Preference number: 6 (lower is better)
Translates to: LIILLLHGTIPS*EISYYVGLLVT
Trigger: TGTTACCAACAAACCAACATAATAGGATATTTCCAAAGAAGGGATTGTCCCGTGTAGTAGAAGGATGATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 90 bp CCTTTGTGGAGATCCAGATTTCCATCTGGTATCATTTTCTTCTACTaGAAGAGCTTTCTTAGCATTTCTTCTCACTCAAGTCTTCTTATG +
Preference number: 6 (lower is better)
Translates to: PLWRSRFPSGIIFFY*KSFLSISSHSSLLM
Trigger: CATAAGAAGACTTGAGTGAGAAGAAATGCTAAGAAAGCTCTTCAAGTAGAAGAAAATGATACCAGATGGAAATCTGGATCTCCACAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652483.1
CDS CAA 90 bp CATTTGTTCCTCATCATCCTTCTACTACACGGGACAATCCCTTCTTaGGAAATATCCTATTATGTTGGTTTGTTGGTAACAAAGCCTTTA +
Preference number: 6 (lower is better)
Translates to: HLFLIILLLHGTIPS*EISYYVGLLVTKPL
Trigger: TAAAGGCTTTGTTACCAACAAACCAACATAATAGGATATTTCCAAAGAAGGGATTGTCCCGTGTAGTAGAAGGATGATGAGGAACAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1
CDS CAA 72 bp AAGCTGGCTAGTGGGTATACGTGGATGTTTAATATATaGTTCTTTATACCTCCTGGTGAGTCTAAAATACAT +
Preference number: 6 (lower is better)
Translates to: KLASGYTWMFNI*FFIPPGESKIH
Trigger: ATGTATTTTAGACTCACCAGGAGGTATAAAGAACAATATATTAAACATCCACGTATACCCACTAGCCAGCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679569.1
ENST00000680454.1