RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTOR (Homo sapiens)

Ensembl gene IDs: ENSG00000198793

Ensembl transcript IDs: ENST00000361445.9, ENST00000376838.5, ENST00000455339.1, ENST00000473471.5, ENST00000476768.1, ENST00000490931.1, ENST00000495435.1

Found 880 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAACCCTGCTGCAGAAGGCCAGTGAGGGTGGTCCCACTGCACAGTaGTCCCCTCTGTGCATCTGCTCAGCCGAGGCTGCCAGCGATCTG +
Preference number: 1 (lower is better)
Translates to: RTLLQKASEGGPTAQ*SPLCICSAEAASDL
Trigger: CAGATCGCTGGCAGCCTCGGCTGAGCAGATGCACAGAGGGGATCACTGTGCAGTGGGACCACCCTCACTGGCCTTCTGCAGCAGGGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR GCA 90 bp GGGTCTGATGGAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTaGAAACATTTCTGCTGCTGTCCACAGACCAGTGAGGTCTTGGGA +
Preference number: 1 (lower is better)
Translates to: GSDGRQTFCTHFGLS*KHFCCCPQTSEVLG
Trigger: TCCCAAGACCTCACTGGTCTGTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTCCATCAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR TCA 90 bp TACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTaGCAATATATTCTTCAACAGCAGCTAGAAAGTTGGTTCAAACCA +
Preference number: 1 (lower is better)
Translates to: YYVSLSWEPNQALCF*QYILQQQLESWFKP
Trigger: TGGTTTGAACCAACTTTCTAGCTGCTGTTGAAGAATATATTGTCAGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGCTGCAGAAGGCCAGTaGGGGTGGTCCCACTGCACA +
Preference number: 2 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSAAEGQ*GWSHCT
Trigger: TGTGCAGTGGGACCACCCTCACTGGCCTTCTGCAGC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTTCCCCTCTGTGCATCTaGTCAGCCGAGGCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISSPLCI*SAEAAS
Trigger: GCTGGCAGCCTCGGCTGAGCAGATGCACAGAGGGGA...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGGTCCCACTGCACAGTaGTCCCCTCTGTGCATCTGC +
Preference number: 2 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSGPTAQ*SPLCIC
Trigger: GCAGATGCACAGAGGGGATCACTGTGCAGTGGGACC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR GCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATGCAAACATTTCTGCTaGTGTCCACAGACCAGTGAG +
Preference number: 2 (lower is better)
Translates to: RSGLELKRVSRSITGSDGCKHFC*CPQTSE
Trigger: CTCACTGGTCTGTGGACAGCAGCAGAAATGTTTGCA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGATAGGTGGCAGGGGTaGGGTCAGCATCTTCTGTGT +
Preference number: 2 (lower is better)
Translates to: KQSILTTENIPEPCCRRPDRWQG*GQHLLC
Trigger: ACACAGAAGATGCTGACCTCACCCCTGCCACCTATC...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTATGTTCTCCACGACCTaGGGCTTCTTGGCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISMFSTT*GFLAVL
Trigger: CAGCACAGCCAAGAAGCCTCAGGTCGTGGAGAACAT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTATGTTCTCCACGACCTaGGGCTTCTTGGCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSMFSTT*GFLAVL
Trigger: CAGCACAGCCAAGAAGCCTCAGGTCGTGGAGAACAT...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCACTAGCGGTCAGGTCTTaGATTGAAGCGTGTGAGTCG +
Preference number: 2 (lower is better)
Translates to: KQSILTTENIPEPCCRRPLAVRS*IEACES
Trigger: CGACTCACACGCTTCAATTCAAGACCTGACCGCTAG...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTCTAGCGGTCAGGTCTTaGATTGAAGCGTGTGAGTCG +
Preference number: 2 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSLAVRS*IEACES
Trigger: CGACTCACACGCTTCAATTCAAGACCTGACCGCTAG...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTAGGCTGCCAGCGATCTaGATAAACCTCCCTACTAGC +
Preference number: 2 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSRLPAI*INLPTS
Trigger: GCTAGTAGGGAGGTTTATTCAGATCGCTGGCAGCCT...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGACAAACTTTCTCACCATaGTTTCAGTTTAGTGGAAGC +
Preference number: 2 (lower is better)
Translates to: RSGLELKRVSRSITGSDGQTFSP*FQFSGS
Trigger: GCTTCCACTAAACTGAAACCATGGTGAGAAAGTTTG...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCTTCTTGGCTGTGCTaGGTTTGCTGTACCCATGTT +
Preference number: 2 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISASWLC*VCCTHV
Trigger: AACATGGGTACAGCAAACTCAGCACAGCCAAGAAGC...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGTTCCCCAAAATGAATaGCTTGATTTACGTGGTATT +
Preference number: 2 (lower is better)
Translates to: RSGLELKRVSRSITGSDGVPQNE*LDLRGI
Trigger: AATACCACGTAAATCAAGCCATTCATTTTGGGGAAC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR GCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCATCTTGCAAACATTTCTaGTGCTGTCCACAGACCAGT +
Preference number: 2 (lower is better)
Translates to: KQSILTTENIPEPCCRRPSCKHF*CCPQTS
Trigger: ACTGGTCTGTGGACAGCAGCAGAAATGTTTGCAAGA...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTTGCTGTACCCATGTTaGGAGGAGCAACTAGGTCAT +
Preference number: 2 (lower is better)
Translates to: RPFVLILAYLANISAAVHLLYPC*EEQLGH
Trigger: ATGACCTAGTTGCTCCTCTCAACATGGGTACAGCAA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR GCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCATTTTGGCCTATCTTaGAAACATTTCTGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLHFGLS*KHFCCC
Trigger: ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCAGCAGCTAGAAAGTTaGTTCAAACCAACTTTTAAT +
Preference number: 2 (lower is better)
Translates to: QSILTTENIPEPCCRRPVQQLES*FKPTFN
Trigger: ATTAAAAGTTGGTTTGAACCAACTTTCTAGCTGCTG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTTCCCCAAAATGAATaGCTTGATTTACGTGGTATT +
Preference number: 2 (lower is better)
Translates to: KQSILTTENIPEPCCRRPVPQNE*LDLRGI
Trigger: AATACCACGTAAATCAAGCCATTCATTTTGGGGAAC...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCAAGCCTTGTGTTTCTaGCAATATATTCTTCAACAG +
Preference number: 2 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSQALCF*QYILQQ
Trigger: CTGTTGAAGAATATATTGTCAGAAACACAAGGCTTG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCAAGCCTTGTGTTTCTaGCAATATATTCTTCAACAG +
Preference number: 2 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISQALCF*QYILQQ
Trigger: CTGTTGAAGAATATATTGTCAGAAACACAAGGCTTG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCCAGCATCACTGGGTCTaGTGGAAGACAGACCTTTTG +
Preference number: 2 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCQHHWV*WKTDLL
Trigger: CAAAAGGTCTGTCTTCCATCAGACCCAGTGATGCTG...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCAAACTTTCTCACCATaGTTTCAGTTTAGTGGAAGC +
Preference number: 2 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSQTFSP*FQFSGS
Trigger: GCTTCCACTAAACTGAAACCATGGTGAGAAAGTTTG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTTGCTGTACCCATGTTaGGAGGAGCAACTAGGTCAT +
Preference number: 2 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCLLYPC*EEQLGH
Trigger: ATGACCTAGTTGCTCCTCTCAACATGGGTACAGCAA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTATGTTTCACTGTCCTaGGAACCAAATCAAGCCTTG +
Preference number: 2 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFYVSLS*EPNQAL
Trigger: CAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCCAGCAGCTAGAAAGTTaGTTCAAACCAACTTTTAAT +
Preference number: 2 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCQQLES*FKPTFN
Trigger: ATTAAAAGTTGGTTTGAACCAACTTTCTAGCTGCTG...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR TCA 72 bp CTCTGTGCATCTGCTCAGCCGAGGCTGCCAGCGATCTaGATAAACCTCCCTACTAGCGGTCAGGTCTTGAAT +
Preference number: 3 (lower is better)
Translates to: LCASAQPRLPAI*INLPTSGQVLN
Trigger: ATTCAAGACCTGACCGCTAGTAGGGAGGTTTATTCAGATCGCTGGCAGCCTCGGCTGAGCAGATGCACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR TCA 72 bp CACAGACCAGTGAGGTCTTGGGATAGGTGGCAGGGGTaGGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGA +
Preference number: 3 (lower is better)
Translates to: HRPVRSWDRWQG*GQHLLCLYSLG
Trigger: TCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCACCTATCCCAAGACCTCACTGGTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR TCA 72 bp GGCTTCTTGGCTGTGCTGAGTTTGCTGTACCCATGTTaGGAGGAGCAACTAGGTCATTCTTCCATCAGCAAG +
Preference number: 3 (lower is better)
Translates to: GFLAVLSLLYPC*EEQLGHSSISK
Trigger: CTTGCTGATGGAAGAATGACCTAGTTGCTCCTCTCAACATGGGTACAGCAAACTCAGCACAGCCAAGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CAA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTTTGCTGTACCCATGTaGAGAGGAGCAACTAGGTCA +
Preference number: 3 (lower is better)
Translates to: VAGVRSASSVSLQSRILIFAVPM*RGATRS
Trigger: TGACCTAGTTGCTCCTCTCAACATGGGTACAGCAAA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CAA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCCTTTTGTACTCATTTaGGCCTATCTTGCAAACATT +
Preference number: 3 (lower is better)
Translates to: QSILTTENIPEPCCRRPVPFVLI*AYLANI
Trigger: AATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CAA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCATGGAAGACAGACCTTTaGTACTCATTTTGGCCTATC +
Preference number: 3 (lower is better)
Translates to: KQSILTTENIPEPCCRRPWKTDL*YSFWPI
Trigger: GATAGGCCAAAATGAGTACAAAAGGTCTGTCTTCCA...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTTTTGCTGTACCCATGTaGAGAGGAGCAACTAGGTCA +
Preference number: 3 (lower is better)
Translates to: EDRPFVLILAYLANISAAFAVPM*RGATRS
Trigger: TGACCTAGTTGCTCCTCTCAACATGGGTACAGCAAA...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CAA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCCGGTCAGGTCTTGAATaGAAGCGTGTGAGTCGCAGC +
Preference number: 3 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFRSGLE*KRVSRS
Trigger: GCTGCGACTCACACGCTTCAATTCAAGACCTGACCG...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CAA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCACCTTTTGTACTCATTTaGGCCTATCTTGCAAACATT +
Preference number: 3 (lower is better)
Translates to: KQSILTTENIPEPCCRRPPFVLI*AYLANI
Trigger: AATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGG...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CAA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTCATTTTGGCCTATCTaGCAAACATTTCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFSFWPI*QTFLLL
Trigger: CAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
3UTR-3UTR CAA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTGGAAGACAGACCTTTaGTACTCATTTTGGCCTATC +
Preference number: 3 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCWKTDL*YSFWPI
Trigger: GATAGGCCAAAATGAGTACAAAAGGTCTGTCTTCCA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATGCTGCCCTCGGTGCTaGCAGTGGTGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGCCPRC*QWWWQW
Trigger: CCACTGCCACCACCACTGCCAGCACCGAGGGCAGCA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGACAGTGGTGGCGTTGGTaGTGTTGGCCCCGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGQWWRW*CWPRWH
Trigger: ATGCCAGCGGGGCCAACATCACCAACGCCACCACTG...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAATGGGCGAAGTCCTTTaGGGGCAGGGCCGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGMGEVL*GQGRSD
Trigger: ATCCGAGCGGCCCTGCCCCCAAAGGACTTCGCCCAT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATCAGCCACAGCAGCTTaGCCAGGTCGTCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGSATAA*PGRPQL
Trigger: CAGCTGGGGACGACCTGGCCAAGCTGCTGTGGCTGA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATCAGTGACCTTCTTCTaGAGCGGCGATGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGSVTFF*SGDGVG
Trigger: CCCCACCCCATCGCCGCTGCAGAAGAAGGTCACTGA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATCCCGGATGAGGGCGTaGAGTGTGTCACAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGSRMRA*SVSQWG
Trigger: TCCCCACTGTGACACACTGCACGCCCTCATCCGGGA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAATCCTGCTGGATGCCTaGCCCCATTGCTCGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGILLDA*PHCSSQ
Trigger: CTGGCTCGAGCAATGGGGCCAGGCATCCAGCAGGAT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGCGTGTCCATGGCTGTaGAGCGCAGTTCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGACPWL*SAVLGS
Trigger: AGAGCCCAGAACTGCGCTCCACAGCCATGGACACGC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCACAGTGGCGGCCGTGGTaGCGGCAGTGGTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPQWRPW*RQWWRW
Trigger: CCAACGCCACCACTGCCGCCACCACGGCCGCCACTG...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCACCTCGGTGCTGGCAGTaGTGGTGGCAGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPPRCWQ*WWQWRP
Trigger: CGGCCGCCACTGCCACCACCACTGCCAGCACCGAGG...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGACACGCATGCCAGGCCTaGTTGGGGAGAAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGHACQA*LGRKAR
Trigger: CCTTGCCTTTCTCCCCAACCAGGCCTGGCATGCGTG...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR TCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCCCCATGAGGCCTTGGTaGGAGCTGTACCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIPMRPW*ELYPSS
Trigger: GCTGCTGGGGTACAGCTCTCACCAAGGCCTCATGGG...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATGGACAGATCCTCAGTaGCCTTCTTCTGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGWTDPQ*PSSAAA
Trigger: CGCCGCTGCAGAAGAAGGTCACTGAGGATCTGTCCA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCGCTGCAGAAGGCCAGTaGGGGTGGTCCCACTGCACA +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIAAEGQ*GWSHCT
Trigger: TGTGCAGTGGGACCACCCTCACTGGCCTTCTGCAGC...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGCCAAGGCCTCAGCTaGCGCCGCCAGCACCGGTAC +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISGQGLS*RRQHRY
Trigger: GTACCGGTGCTGGCGGCGGCAGCTGAGGCCTTGGCC...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGATGCCTGGCCCCATTaGTCGAGCCAGCATGCTGAT +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGDAWPH*SSQHAD
Trigger: ATCAGCATGCTGGCTCGAGCAATGGGGCCAGGCATC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCGAGCAAGAGCCAGCCTaGCACTCTTGCCGCACAGGC +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIEQEPA*HSCRTG
Trigger: GCCTGTGCGGCAAGAGTGGCAGGCTGGCTCTTGCTC...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCCTCGCTCTCACTGTTaGTGCCCTCGGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVPRSHC*CPRCWQ
Trigger: CTGCCAGCACCGAGGGCAGCAACAGTGAGAGCGAGG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTGGGGCTGTTCTCGGTaGTCTCGGCCTCGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVWGCSR*SRPRSH
Trigger: GTGAGAGCGAGGCCGAGAGCACCGAGAACAGCCCCA...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGCCTTCTGCCTCTTATaGGCGAAGTCCTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGAFCLL*AKSFGG
Trigger: GCCCCCAAAGGACTTCGCCCATAAGAGGCAGAAGGC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAACCATCATGGCCTGCTaGACCAGGGTGTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGTIMAC*TRVLLC
Trigger: GCACAGCAACACCCTGGTCCAGCAGGCCATGATGGT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCCCCACCAAGGCATTTaGCTGCTGGGGCTGTACAGC +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVPHQGI*LLGLYS
Trigger: GCTGTACAGCCCCAGCAGTCAAATGCCTTGGTGGGG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAAGGTCCCAAATCCCATaGGGCCTTGGTGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGRSQIP*GLGESC
Trigger: ACAGCTCTCACCAAGGCCTCATGGGATTTGGGACCT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGGGGGAACCCAGCCAATaGGGCCCGAGTTGGTCGATA +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVGEPSQ*GPSWSI
Trigger: TATCGACCAACTCGGGCCTCATTGGCTGGGTTCCCC...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGGTCTCCGGCCCTCATTaGGGTCAGCACCCAGCCATT +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVVSGPH*GQHPAI
Trigger: AATGGCTGGGTGCTGACCGCAATGAGGGCCGGAGAC...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATGGTCCACTAGCCAATaGATCCCCTTGGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGWSTSQ*IPLATP
Trigger: AGGAGTGGCCAAGGGGATGCATTGGCTAGTGGACCA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATTGTTGGCTGCATTGTaGCGGGCTGTCGTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGLLAAL*RAVVVD
Trigger: GTCTACCACGACAGCCCGGCACAATGCAGCCAACAA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTCCCGGATGAGGGCGTaGAGTGTGTCACAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVSRMRA*SVSQWG
Trigger: TCCCCACTGTGACACACTGCACGCCCTCATCCGGGA...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCAGTAGCCCCAGGGCTTaGAAGGCCGCTGTACGTTCC +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILISSPRA*KAAVRS
Trigger: GGAACGTACAGCGGCCTTCCAAGCCCTGGGGCTACT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGATGGGCCAGGCCCTTaGGCATGCCTGGGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLDGPGP*ACLGGE
Trigger: TTCGCCACCCAGGCATGCCCAAGGGCCTGGCCCATC...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGACTAGAATGGCAGGGGTaGGGCCTTTCTGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGLEWQG*GLSGTP
Trigger: TGGAGTTCCAGAAAGGCCCCACCCCTGCCATTCTAG...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCACTGCTGGTGGAGTTaGCCCCATTCCCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLHCWWS*PHSPKA
Trigger: GGCCTTGGGGGAATGGGGTCAACTCCACCAGCAGTG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCCCTGTAGTCCCGGATaGGGGCGTGCAGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLPCSPG*GRAVCH
Trigger: GTGACACACTGCACGCCCTCATCCGGGACTACAGGG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGACTAGCGGTCAGGTCTTaGATTGAAGCGTGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGLAVRS*IEACES
Trigger: CGACTCACACGCTTCAATTCAAGACCTGACCGCTAG...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAAGGCTGCCAGCGATCTaGATAAACCTCCCTACTAGC +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGRLPAI*INLPTS
Trigger: GCTAGTAGGGAGGTTTATTCAGATCGCTGGCAGCCT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGCTGCAGAAGGCCAGTaGGGGTGGTCCCACTGCACA +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLAAEGQ*GWSHCT
Trigger: TGTGCAGTGGGACCACCCTCACTGGCCTTCTGCAGC...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCCAGGCCCTTGGGCATaGCTGGGTGGCGAAGGGGTT +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSPGPWA*LGGEGV
Trigger: AACCCCTTCGCCACCCAGGCATGCCCAAGGGCCTGG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATGCTGGGCCTGTTGCTaGATGGTCTGGACAAAATGC +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGCWACC*MVWTKC
Trigger: GCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCGCTCTCACTGTTGCTaGCCTCGGTGCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLRSHCC*PRCWQW
Trigger: CCACTGCCAGCACCGAGGGCAGCAACAGTGAGAGCG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTGGGGCTGTTCTCGGTaGTCTCGGCCTCGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLWGCSR*SRPRSH
Trigger: GTGAGAGCGAGGCCGAGAGCACCGAGAACAGCCCCA...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCACCAGGCCGAAGAGCTaGATCACACGCTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILITRPKS*ITRSSW
Trigger: CCAGGATGAGCGTGTGATGCAGCTCTTCGGCCTGGT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTCCCCTCTGTGCATCTaGTCAGCCGAGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLSPLCI*SAEAAS
Trigger: GCTGGCAGCCTCGGCTGAGCAGATGCACAGAGGGGA...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTGGCGGCTTTGGCCCTaGTTTCCTCATTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIWRLWP*FPHSGS
Trigger: AGAGCCGGAATGAGGAAACCAGGGCCAAAGCCGCCA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCAAGTGTCCCCTGCCATaGCAAGACGGCCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIKCPLP*QDGQWP
Trigger: AGGCCATTGGCCGTCTTGCCATGGCAGGGGACACTT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCCTCTCCCACCAGATCTaGCGGATGATCTCTCGTCGC +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILILSHQI*RMISRR
Trigger: GCGACGAGAGATCATCCGCCAGATCTGGTGGGAGAG...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCCTCGGTGCTGGCAGTaGTGGTGGCAGTGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAPRCWQ*WWQWRP
Trigger: CGGCCGCCACTGCCACCACCACTGCCAGCACCGAGG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGCAGCGGCGATGGGGTaGGGCTGTTCTCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSAAAMG*GCSRCS
Trigger: AGAGCACCGAGAACAGCCCCACCCCATCGCCGCTGC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTGCAGCGGCGATGGGGTaGGGCTGTTCTCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSAAAMG*GCSRCS
Trigger: AGAGCACCGAGAACAGCCCCACCCCATCGCCGCTGC...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGATACTGGGTATCTGTaGAGGCAGAAGGTCGGAATG +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGDTGYL*RQKVGM
Trigger: CATTCCGACCTTCTGCCTTCACAGATACCCAGTATC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGCAGGGCCGCTCGGATaGTGTCCAGCACGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCAGPLG*CPAREA
Trigger: TGCCTCGCGTGCTGGACATCATCCGAGCGGCCCTGC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATCACTGTTCAGGAAATaGTCCGCACAGTGGCGAACA +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGSLFRK*SAQWRT
Trigger: TGTTCGCCACTGTGCGGATCATTTCCTGAACAGTGA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTGGATTCTGACAGGCTaGCAGCAGAGGCATCCCGGG +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLWILTG*QQRHPG
Trigger: CCCGGGATGCCTCTGCTGTCAGCCTGTCAGAATCCA...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAACCAGATCTGGCGGATaGTCTCTCGTCGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPTRSGG*SLVARG
Trigger: TCCCCGAGCGACGAGAGATCATCCGCCAGATCTGGT...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTTGGCCCCGCTGGCATaGCGCAGTTTCTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILILAPLA*RSFFFS
Trigger: TGAGAAGAAGAAACTGCGTCATGCCAGCGGGGCCAA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCAGTGGTGGCGTTGGTaGTGTTGGCCCCGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSQWWRW*CWPRWH
Trigger: ATGCCAGCGGGGCCAACATCACCAACGCCACCACTG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATGGTCGATAAAGGGATaGCAGCGTATCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGWSIKG*QRISGC
Trigger: GCATCCAGAGATACGCTGTCATCCCTTTATCGACCA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGATGTTCTCCACGACCTaGGGCTTCTTGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVMFSTT*GFLAVL
Trigger: CAGCACAGCCAAGAAGCCTCAGGTCGTGGAGAACAT...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGGTCCCACTGCACAGTaGTCCCCTCTGTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPGPTAQ*SPLCIC
Trigger: GCAGATGCACAGAGGGGATCACTGTGCAGTGGGACC...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCACCAAGGCATTTGACTaGTGGGGCTGTACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILITKAFD*WGCTAW
Trigger: CCAGGCTGTACAGCCCCAGCAGTCAAATGCCTTGGT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCGGCATCCACCTGCATTaGCTTCTGCCTCTTATGGGC +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIGIHLH*LLPLMG
Trigger: GCCCATAAGAGGCAGAAGGCAATGCAGGTGGATGCC...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCATTGGAGACCAGGTaGCCCAGCATGCGGGCACTC +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISALETR*PSMRAL
Trigger: GAGTGCCCGCATGCTGGGGCACCTGGTCTCCAATGC...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTAGGCCTTGTACCAGCTaGGGTCGTGCTCTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSRPCTS*GRALWR
Trigger: CCGCCACAGAGCACGACCGCAGCTGGTACAAGGCCT...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTTGTTGGCTGCATTGTaGCGGGCTGTCGTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVLLAAL*RAVVVD
Trigger: GTCTACCACGACAGCCCGGCACAATGCAGCCAACAA...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTTCCCCTCTGTGCATCTaGTCAGCCGAGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSSPLCI*SAEAAS
Trigger: GCTGGCAGCCTCGGCTGAGCAGATGCACAGAGGGGA...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTGGGGCTGTACAGCCTaGAAACTGGTGAAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIWGCTA*KLVKGV
Trigger: TACCCCCTTCACCAGTTTCCAGGCTGTACAGCCCCA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTGCCCTTGGGCATGCCTaGGTGGCGAAGGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSALGHA*VAKGFV
Trigger: CACAAACCCCTTCGCCACCCAGGCATGCCCAAGGGC...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGCGCCCCAGGCCTTTTaGAGGTTGATGGTGCTGACG +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLAPQAF*RLMVLT
Trigger: CGTCAGCACCATCAACCTCCAAAAGGCCTGGGGCGC...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCACTTTGGAGACCCTCCTaGCAGCGCCCCAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPLWRPS*QRPRPF
Trigger: AAAAGGCCTGGGGCGCTGCCAGGAGGGTCTCCAAAG...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTGCTGCCCTCGGTGCTaGCAGTGGTGGTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSCCPRC*QWWWQW
Trigger: CCACTGCCACCACCACTGCCAGCACCGAGGGCAGCA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCTTCTGCAGCGGCGATaGGGTGGGGCTGTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSLLQRR*GGAVLG
Trigger: ACCGAGAACAGCCCCACCCCATCGCCGCTGCAGAAG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCTTCTGCAGCGGCGATaGGGTGGGGCTGTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISLLQRR*GGAVLG
Trigger: ACCGAGAACAGCCCCACCCCATCGCCGCTGCAGAAG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGTCCCACCAAGGGTCTaGGCGTATCAATTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGVPPRV*AYQFLQ
Trigger: TTGCAAGAATTGATACGCCCAGACCCTTGGTGGGAC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTGCAGTGTGTCACAGTaGGGAACCCAGCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILICSVSQ*GTQPMR
Trigger: CCTCATTGGCTGGGTTCCCCACTGTGACACACTGCA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCAGCATCAGGTTGGATaGGTGTCTATCTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVQHQVG*VSISQA
Trigger: GGCCTGGGAGATAGACACCCATCCAACCTGATGCTG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGACGTTTTCTTATGGGCTaGCTCTCCAAGTTCCACACC +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGRFLMG*LSKFHT
Trigger: GGTGTGGAACTTGGAGAGCCAGCCCATAAGAAAACG...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCGAGTAGACTCCTCTTaGCTCATCTCTCGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVRVDSS*LISRSS
Trigger: GGAACTCCGAGAGATGAGTCAAGAGGAGTCTACTCG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGTTCCTTCTCCTTCTTaGCACAGCTTAGGACATGGT +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGVPSPS*HSLGHG
Trigger: ACCATGTCCTAAGCTGTGTCAAGAAGGAGAAGGAAC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTTTCGGAGGGCAAGAGTaGTGCTGCCCACATCGCTGG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISFGGQE*CCPHRW
Trigger: CCAGCGATGTGGGCAGCATCACTCTTGCCCTCCGAA...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTGTCTTCATGAGGGCTaGCCACAAGGGACCGCACCA +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLCLHEG*PQGTAP
Trigger: TGGTGCGGTCCCTTGTGGTCAGCCCTCATGAAGACA...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCCACTAAGGCCTCATTaGCATCTGGCCAGTGACCAT +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVPLRPH*HLASDH
Trigger: ATGGTCACTGGCCAGATGTCAATGAGGCCTTAGTGG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATCACTGTGTGGCATGTaGTTCTGTAGTTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGSLCGM*FCSCHP
Trigger: TGGATGGCAACTACAGAATCACATGCCACACAGTGA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCTTCCAGCACGGCCATaGCACTGTCCTTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLLPARP*HCPCAL
Trigger: GAGAGCACAAGGACAGTGTCATGGCCGTGCTGGAAG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCACTTCCAGCACGGCCATaGCACTGTCCTTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPLPARP*HCPCAL
Trigger: GAGAGCACAAGGACAGTGTCATGGCCGTGCTGGAAG...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCACTGTCCACAGACCAGTaGGGTCTTGGGATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPLSTDQ*GLGIGG
Trigger: GCCACCTATCCCAAGACCTCACTGGTCTGTGGACAG...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGTCCCACTGCACAGTaGTCCCCTCTGTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISGPTAQ*SPLCIC
Trigger: GCAGATGCACAGAGGGGATCACTGTGCAGTGGGACC...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGCGCAAGGTCGATGCTaGGGAACAGCTGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSAQGRC*GTAAPA
Trigger: GGCAGGAGCAGCTGTTCCTCAGCATCGACCTTGCGC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR GCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCGGTTCCAAGCATCTTaGCCTGAGGTTCGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSRFQAS*PEVRAA
Trigger: AGCCGCGCGAACCTCAGGGCAAGATGCTTGGAACCG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGGCAGAAGGTCGGAATaGAGCCAAGCGGGGCAACAA +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLGRRSE*SQAGQQ
Trigger: TTGTTGCCCCGCTTGGCTGCATTCCGACCTTCTGCC...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCACCTGCATTGCCTTCTaGCTCTTATGGGCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILITCIAF*LLWAKS
Trigger: GGACTTCGCCCATAAGAGGCAGAAGGCAATGCAGGT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCGCCTGGGCCAGGTGTaGATCAAAGCGCTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSRLGQV*IKALVQ
Trigger: CTGGACGAGCGCTTTGATGCACACCTGGCCCAGGCG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGCCACAAACAAGGCCTaGAAGTTCTCCGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSATNKA*KFSAWA
Trigger: GGCCCAGGCGGAGAACTTGCAGGCCTTGTTTGTGGC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCTACTACATAGCCAGTaGTGGCCACCAACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVLLHSQ*WPPTVP
Trigger: TGGGACAGTTGGTGGCCAGCACTGGCTATGTAGTAG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTGCAGTTCCTGCTTATaGTGCTGGTCCTCAGTAGCG +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILICSSCL*CWSSVA
Trigger: CGCTACTGAGGACCAGCAGCATAAGCAGGAACTGCA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTGTTGCTGCCCTCGGTaGTGGCAGTGGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHCCCPR*WQWWWQ
Trigger: CTGCCACCACCACTGCCAGCACCGAGGGCAGCAACA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAACCAGGGTGTTGCTGTaGTCACACATGTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGTRVLL*SHMFFR
Trigger: TCTGAAGAACATGTGTGAGCACAGCAACACCCTGGT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCGCTGGACCAGGGTGTTaGTGTGCTCACACATGTTCT +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIAGPGC*CAHTCS
Trigger: AGAACATGTGTGAGCACAGCAACACCCTGGTCCAGC...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAAGTGCTGGAGCTCCTTaGCGGCTTTGGCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPSAGAP*RLWPWF
Trigger: AAACCAGGGCCAAAGCCGCCAAGGAGCTCCAGCACT...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGACACCTTTCCTCTCATTaGCATCTGAGCTGGAAACCA +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGHLSSH*HLSWKP
Trigger: TGGTTTCCAGCTCAGATGCCAATGAGAGGAAAGGTG...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTGGCCCACAGTGCAGATaGCCAGCTCCCGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSGPQCR*PAPGSQ
Trigger: TTGAGATCCGGGAGCTGGCCATCTGCACTGTGGGCC...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGATCACACCTGGGTTTaGATCAGGGTCTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGDHTWV*IRVWIF
Trigger: AAAGATCCAGACCCTGATCCAAACCCAGGTGTGATC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGACACGCAGCATGTGTaGGATCAGCTGGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPDTQHV*DQLGQV
Trigger: TACCTGCCCCAGCTGATCCCACACATGCTGCGTGTC...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCCAGCCAGTCATCTTTaGAGACCCTCCTGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSPASHL*RPSWQR
Trigger: GCGCTGCCAGGAGGGTCTCCAAAGATGACTGGCTGG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTCCTGCTTATGCTGCTaGTCCTCAGTAGCGATGGCA +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILISCLCC*SSVAMA
Trigger: TGCCATCGCTACTGAGGACCAGCAGCATAAGCAGGA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAACCACACCTCGGAGCTaGGGCTTTTCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPTTPRS*GFSATA
Trigger: TGCTGTGGCTGAAAAGCCCCAGCTCCGAGGTGTGGT...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCGGTCCAGCATCAGGTTaGATGGGTGTCTATCTCCCA +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIGPASG*MGVYLP
Trigger: TGGGAGATAGACACCCATCCAACCTGATGCTGGACC...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCGTGATGGGCACATCTaGGCCTCCAGTTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVRDGHI*ASSYQK
Trigger: TTTCTGGTAACTGGAGGCCCAGATGTGCCCATCACG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTGCCTGTACCACTaGGGCTTCTGCATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPVCLYH*GFCISF
Trigger: GAAGGAGATGCAGAAGCCTCAGTGGTACAGGCACAC...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATTGCCAGGACATTATTaGTCACACCTGGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGLPGHY*SHLGLD
Trigger: ATCCAAACCCAGGTGTGATCAATAATGTCCTGGCAA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAAGAATGATCGTGCTCTaGATTGAGGTGTTCATGACC +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGRMIVL*IEVFMT
Trigger: GGTCATGAACACCTCAATTCAGAGCACGATCATTCT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCATAGCGCTGATGATTaGTTCGGTGTCGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVHSADD*FGVAPE
Trigger: TTCTGGTGCGACACCGAATCAATCATCAGCGCTATG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGAAGCATCGGGCCATaGGCTTGTGCAGTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISGSIGP*ACAVPA
Trigger: AGCAGGAACTGCACAAGCTCATGGCCCGATGCTTCC...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGACTGTGGCATCCACCTaGATTGCCTTCTGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVTVAST*IAFCLL
Trigger: TAAGAGGCAGAAGGCAATGCAGGTGGATGCCACAGT...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTGCGGGCAGCCTCCATaGGGATCTCCTTGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSCGQPP*GSPCAH
Trigger: GTGAGCACAAGGAGATCCGCATGGAGGCTGCCCGCA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTTTGCTAAGCACATCTaGCACCACTTGCACTGCGGT +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVFAKHI*HHLHCG
Trigger: ACCGCAGTGCAAGTGGTGGCAGATGTGCTTAGCAAA...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCACGGATGGCCTCTCTaGGTGTACCCTGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISHGWPL*VYPGSA
Trigger: AGCAGAACCAGGGTACACGCAGAGAGGCCATCCGTG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGGTCAATGCACTGTTGTaGCAAGGAGAAGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVVNALL*QGEEVL
Trigger: CAGGACCTCTTCTCCTTGGCACAACAGTGCATTGAC...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCCCTGTAGATTCAGCTaGCACTCTCCAAGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVPCRFS*HSPSFR
Trigger: CCTGAAACTTGGAGAGTGGCAGCTGAATCTACAGGG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTGTTGCTGCCCTCGGTaGTGGCAGTGGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCCCCPR*WQWWWQ
Trigger: CTGCCACCACCACTGCCAGCACCGAGGGCAGCAACA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCCTCGCTCTCACTGTTaGTGCCCTCGGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAPRSHC*CPRCWQ
Trigger: CTGCCAGCACCGAGGGCAGCAACAGTGAGAGCGAGG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTCAGTGACCTTCTTCTaGAGCGGCGATGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHSVTFF*SGDGVG
Trigger: CCCCACCCCATCGCCGCTGCAGAAGAAGGTCACTGA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCCAGCACCTCAAACATaGCTTTCACGTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVPAPQT*LSRSFP
Trigger: GGGAAAGGAACGTGAAAGGCATGTTTGAGGTGCTGG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACCGTGCAGGGGATACATaGAGGCGAGGAGTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHRAGDT*RRGVRA
Trigger: CGCTCTCACTCCTCGCCTGCATGTATCCCCTGCACG...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGCAGGAGAGAGCTCTTaGCTCAAGGGATCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSAGESS*LKGSPG
Trigger: GCCGGGAGATCCCTTGAGGCAAGAGCTCTCTCCTGC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCACGGATGGCCTGTTTaGGGTCCCACACGGCCACAA +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSHGWPV*GPTRPQ
Trigger: TTGTGGCCGTGTGGGACCCCAAACAGGCCATCCGTG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCAGGGTGGACTTAGCTaGACTGGGGGAGGTCCCAAA +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSQGGLS*TGGGPK
Trigger: TTTGGGACCTCCCCCAGTCCAGCTAAGTCCACCCTG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGAGAGACAATGCGGCCTaGGCTGTTGTCATGCATGAA +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVRDNAA*AVVMHE
Trigger: TTCATGCATGACAACAGCCCAGGCCGCATTGTCTCT...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCCTTTCGAGATGGCAGTaGAGCTTCAGGGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILILSRWQ*SFRGIK
Trigger: TTTGATGCCCCTGAAGCTCCACTGCCATCTCGAAAG...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCGCTGCCTTTCGAGATaGCAGTGGAGCTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSRCLSR*QWSFRG
Trigger: GCCCCTGAAGCTCCACTGCCATCTCGAAAGGCAGCG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCCGCAGTTCTGGGCTCTaGTCCAGTGTTCGAACAATA +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIRSSGL*SSVRTI
Trigger: TATTGTTCGAACACTGGACCAGAGCCCAGAACTGCG...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTGCGGTCGTGCTCTGTaGCGGCGCTGTAGTACTGCA +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHCGRAL*RRCSTA
Trigger: TGCAGTACTACAGCGCCGCCACAGAGCACGACCGCA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCCAGTGGCGGCCGTGGTaGCGGCAGTGGTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCQWRPW*RQWWRW
Trigger: CCAACGCCACCACTGCCGCCACCACGGCCGCCACTG...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGACTCTGAGTGTATCCTaGAGGTTGTTGCCTCGTGAC +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVTLSVS*RLLPRD
Trigger: GTCACGAGGCAACAACCTCCAGGATACACTCAGAGT...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTATGAGGGCCTGGGGGTaGTACCGACCAATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISMRAWG*YRPMSV
Trigger: CACAGACATTGGTCGGTACCACCCCCAGGCCCTCAT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTAGAAGCCACTGTCAGTaGGTAGATGAGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISRSHCQ*VDEGLG
Trigger: CCCCAGGCCCTCATCTACCCACTGACAGTGGCTTCT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAATGACAGCGTATCTCTaGATGCTGAGGTTTTTCCGA +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGMTAYL*MLRFFR
Trigger: TCGGAAAAACCTCAGCATCCAGAGATACGCTGTCAT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTCAGCCACAGCAGCTTaGCCAGGTCGTCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCSATAA*PGRPQL
Trigger: CAGCTGGGGACGACCTGGCCAAGCTGCTGTGGCTGA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAATCGCTTGTTGCCTTTaGTATTTGTGTCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGIACCL*YLCPSA
Trigger: GGCTGATGGACACAAATACCAAAGGCAACAAGCGAT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTACAAGAAGGCAGCGGTaGGGACTACTTGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSTRRQR*GLLGKG
Trigger: CCCCTTGCCAAGTAGTCCCCACCGCTGCCTTCTTGT...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGGCAAGGACAGACACTaGAGCTGTGACCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLGKDRH*SCDQQQ
Trigger: CTGCTGTTGGTCACAGCTCCAGTGTCTGTCCTTGCC...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGTCTGGCTAACCACATaGGCATGGCCACTGATGAGG +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSVWLTT*AWPLMR
Trigger: CCTCATCAGTGGCCATGCTCATGTGGTTAGCCAGAC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGATGATGAGAGAGTaGCTGGTCTCGGAAGATCCG +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPVMMRE*LVSEDP
Trigger: CGGATCTTCCGAGACCAGTCACTCTCTCATCATCAC...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCGATCGTGCTCTGAATTaGGGTGTTCATGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIDRALN*GVHDPE
Trigger: TTCTGGGTCATGAACACCTCAATTCAGAGCACGATC...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTCGATGTCTTGTGAGGTaGGGGCCAACTCGATGCTTC +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSRCLVR*GPTRCF
Trigger: GAAGCATCGAGTTGGCCCTCACCTCACAAGACATCG...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTCAGCGATGTCTTGTaGGGTGAGGGCCAACTCGAT +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLFSDVL*GEGQLD
Trigger: ATCGAGTTGGCCCTCACCTCACAAGACATCGCTGAA...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGAGGTTGTTGCCTCGTaGCAAGGAGATGGAACGGAA +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPEVVAS*QGDGTE
Trigger: TTCCGTTCCATCTCCTTGTCACGAGGCAACAACCTC...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCCACTAAGGCCTCATTaGCATCTGGCCAGTGACCAT +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLPLRPH*HLASDH
Trigger: ATGGTCACTGGCCAGATGTCAATGAGGCCTTAGTGG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGCAGCTCTAAGGATGTaGGCTGAGGCAGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSAALRM*AEAAAL
Trigger: CAAAGCAGCTGCCTCAGCTCACATCCTTAGAGCTGC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTTGCTGTACCCATGTTaGGAGGAGCAACTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVLLYPC*EEQLGH
Trigger: ATGACCTAGTTGCTCCTCTCAACATGGGTACAGCAA...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTGATAGGTGGCAGGGGTaGGGTCAGCATCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSDRWQG*GQHLLC
Trigger: ACACAGAAGATGCTGACCTCACCCCTGCCACCTATC...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCTAGCGGTCAGGTCTTaGATTGAAGCGTGTGAGTCG +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLLAVRS*IEACES
Trigger: CGACTCACACGCTTCAATTCAAGACCTGACCGCTAG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGGTAAAAGTGTCCCCTaGCATGGCAAGACGGCCAAT +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPGKSVP*HGKTAN
Trigger: ATTGGCCGTCTTGCCATGGCAGGGGACACTTTTACC...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAAGCTCCTTGATATCCTaGTGGATGCCTGGCCCCATT +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPSSLIS*WMPGPI
Trigger: AATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCT...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGACCAACATTCCCAGCTaGTGGAACAAAAATTCCCGG +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVTNIPS*WNKNSR
Trigger: CCGGGAATTTTTGTTCCAGCAGCTGGGAATGTTGGT...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCCCAGCAGGACACAAATaGAGCATTGAAGAGATCCCT +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIPAGHK*SIEEIP
Trigger: AGGGATCTCTTCAATGCTGCATTTGTGTCCTGCTGG...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACCCAGCCTGCCACTCTTaGCGCACAGGCTTGCATACT +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHPACHS*RTGLHT
Trigger: AGTATGCAAGCCTGTGCGGCAAGAGTGGCAGGCTGG...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGCATGCTGGGCCTGTTaGTGCATGGTCTGGACAAAA +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPACWAC*CMVWTK
Trigger: TTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGC...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTTCAGTAGCGATGGCATaGTGGGCCTGTTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSSVAMA*WACCCM
Trigger: CATGCAGCAACAGGCCCAGCATGCCATCGCTACTGA...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACATCACTGCCCACGCATaGCAGGCCTTGTACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHITAHA*QALYQL
Trigger: CAGCTGGTACAAGGCCTGGCATGCGTGGGCAGTGAT...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGGGCGTATCAATTCTTaGAATGAGCTGAGGTATAAC +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGGRINS*NELRYN
Trigger: GTTATACCTCAGCTCATTGCAAGAATTGATACGCCC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCACCAGGGTGTTGCTGTaGTCACACATGTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILITRVLL*SHMFFR
Trigger: TCTGAAGAACATGTGTGAGCACAGCAACACCCTGGT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCTCACCATCATGGCCTaGTGGACCAGGGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSLTIMA*WTRVLL
Trigger: CAGCAACACCCTGGTCCAGCAGGCCATGATGGTGAG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTATCACTGCCCACGCATaGCAGGCCTGGTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCITAHA*QAWLGR
Trigger: TCTCCCCAACCAGGCCTGGCATGCGTGGGCAGTGAT...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCAGCTCCCTCACGGATaGCCTGTTTGGGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAQLPHG*PVWGPT
Trigger: TGTGGGACCCCAAACAGGCCATCCGTGAGGGAGCTG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCATCAACAAGGCTCCATaGATCCGATCATCCCGATTC +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIINKAP*IRSSRF
Trigger: GAATCGGGATGATCGGATCCATGGAGCCTTGTTGAT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAACACAGCTTAGGACATaGTTCATGGTATCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGTQLRT*FMVSWR
Trigger: TCTCCAAGATACCATGAACCATGTCCTAAGCTGTGT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTTTGGGCATGCCTGGGTaGCGAAGGGGTTTGTGCATA +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSLGMPG*RRGLCI
Trigger: TATGCACAAACCCCTTCGCCACCCAGGCATGCCCAA...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTAAGACAGCGTGTCCATaGCTGTGGAGCGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISKTACP*LWSAVL
Trigger: CAGAACTGCGCTCCACAGCCATGGACACGCTGTCTT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCCAATGCATCCCCTTaGCCACTCCTAAGCATCCGA +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISANASP*PLLSIR
Trigger: TCGGATGCTTAGGAGTGGCCAAGGGGATGCATTGGC...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCATATGCTCGGCACTTaGCAGCTCTCTCACCCAGCA +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSHMLGT*QLSHPA
Trigger: TGCTGGGTGAGAGAGCTGCCAAGTGCCGAGCATATG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACGCCCAGCATCAGCTCTaGGTCGTCCTTGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHAQHQL*VVLVGV
Trigger: GACACCAACAAGGACGACCCAGAGCTGATGCTGGGC...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGAACGGAAGAAGCCCTaGACGGCAGGCACCGTGTAC +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCERKKP*TAGTVY
Trigger: GTACACGGTGCCTGCCGTCCAGGGCTTCTTCCGTTC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGAGCCAGGTATCAATCTaGATGGCTTTCACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLSQVSI*MAFTPS
Trigger: GGAGGGGGTGAAAGCCATCCAGATTGATACCTGGCT...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTATGAGGGCCTGGGGGTaGTACCGACCAATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSMRAWG*YRPMSV
Trigger: CACAGACATTGGTCGGTACCACCCCCAGGCCCTCAT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTTTCCGAAGAGATGTTaGGTCATTGGCCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIFPKRC*VIGQKG
Trigger: ACCCTTCTGGCCAATGACCCAACATCTCTTCGGAAA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATATGTTTCACTGTCCTaGGAACCAAATCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGYVSLS*EPNQAL
Trigger: CAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTGCGGTGGGGACTACTTaGCAAGGGGGAAGAATAAGG +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSAVGTT*QGGRIR
Trigger: CCTTATTCTTCCCCCTTGCCAAGTAGTCCCCACCGC...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR TCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCTCGGAGTTCCATGGTaGCATAGTGCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSLGVPW*HSAGAP
Trigger: AGGAGCTCCAGCACTATGTCACCATGGAACTCCGAG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTTGTTCCGAAGCCCATaGGATCTTTGCAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILILFRSP*DLCSTC
Trigger: ACAAGTACTGCAAAGATCTCATGGGCTTCGGAACAA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCAGGGTTCATGCTACTaGGTCGGCCCACAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCQGSCY*VGPQCR
Trigger: TCTGCACTGTGGGCCGACTCAGTAGCATGAACCCTG...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGTTCTCATGTCTTCATaGGGGCTGACCACAAGGGAC +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSVLMSS*GLTTRD
Trigger: GTCCCTTGTGGTCAGCCCTCATGAAGACATGAGAAC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGAGGTTGTTGCCTCGTaGCAAGGAGATGGAACGGAA +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSEVVAS*QGDGTE
Trigger: TTCCGTTCCATCTCCTTGTCACGAGGCAACAACCTC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTTCTGTGAGAAGCTGGTaGATGAGACGTCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSSVRSW*MRRPTK
Trigger: CTTGGTGGGACGTCTCATTCACCAGCTTCTCACAGA...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTTCTGTGAGAAGCTGGTaGATGAGACGTCCCACCAAG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISSVRSW*MRRPTK
Trigger: CTTGGTGGGACGTCTCATTCACCAGCTTCTCACAGA...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTCTGAGGCAGCTGCTTTaGGATTCGTCGGAACACATG +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSLRQLL*DSSEHM
Trigger: CATGTGTTCCGACGAATCTCAAAGCAGCTGCCTCAG...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGCAGCTCTAAGGATGTaGGCTGAGGCAGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSAALRM*AEAAAL
Trigger: CAAAGCAGCTGCCTCAGCTCACATCCTTAGAGCTGC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTAGAAGTCCCGACCAGTaGGCTTATCTCGAACCCTGT +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSRSPDQ*AYLEPC
Trigger: ACAGGGTTCGAGATAAGCTCACTGGTCGGGACTTCT...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGATAGGTGGCAGGGGTaGGGTCAGCATCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSDRWQG*GQHLLC
Trigger: ACACAGAAGATGCTGACCTCACCCCTGCCACCTATC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTAGGCTGCCAGCGATCTaGATAAACCTCCCTACTAGC +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISRLPAI*INLPTS
Trigger: GCTAGTAGGGAGGTTTATTCAGATCGCTGGCAGCCT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACGAGAACCAGGACAGCTaGATGTCTCCGGCCCTCATT +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHENQDS*MSPALI
Trigger: AATGAGGGCCGGAGACATGCAGCTGTCCTGGTTCTC...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGATCATCCCGATTCATaGCCTTCTCTTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLDHPDS*PSLWPR
Trigger: CCTTGGCCAAAGAGAAGGGCATGAATCGGGATGATC...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCCTCCATCAAGTCTCTaGAACACCGGCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSPPSSL*NTGSPP
Trigger: TGGTGGAGAGCCGGTGTTGCAGAGACTTGATGGAGG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGGGATCAGCGAGTTCTTaGTATTCCTGCATTTCAGCA +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVGSASS*YSCISA
Trigger: TGCTGAAATGCAGGAATAGCAAGAACTCGCTGATCC...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGGGGACTGGTCTATCATaGCAATGTTCACTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVGTGLS*QCSLCA
Trigger: AGCACAAAGTGAACATTGGCATGATAGACCAGTCCC...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCTTGCCGCACAGGCTTaGATACTTGAGCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISLAAQA*ILEPGS
Trigger: AGAACCTGGCTCAAGTATGCAAGCCTGTGCGGCAAG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTCAGAATCTTGTTGGCTaGATTGTGCCGGGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSQNLVG*IVPGCR
Trigger: ACGACAGCCCGGCACAATGCAGCCAACAAGATTCTG...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCTCACCATCATGGCCTaGTGGACCAGGGTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAALTIMA*WTRVLL
Trigger: CAGCAACACCCTGGTCCAGCAGGCCATGATGGTGAG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTTCTTCCAGGCCTTCATaGCACATCTCATGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSSSRPS*HISCQR
Trigger: CCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGA...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCGTTCCATCATAGCATaGAAGGGCTCCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISRSIIA*KGSSTS
Trigger: TGAGGTGCTGGAGCCCTTGCATGCTATGATGGAACG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCGACTTGCAAAGACGGTaGTATGGACTGAATGCGAAT +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIDLQRR*YGLNAN
Trigger: ATTCGCATTCAGTCCATAGCACCGTCTTTGCAAGTC...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTATGACACTGTCCTTGTaGTCTCGCAGCACCTCCATC +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSMTLSL*SRSTSI
Trigger: GATGGAGGTGCTGCGAGAGCACAAGGACAGTGTCAT...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTCTTGCAAACATTTCTaGTGCTGTCCACAGACCAGT +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVSCKHF*CCPQTS
Trigger: ACTGGTCTGTGGACAGCAGCAGAAATGTTTGCAAGA...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTTCGAAGTTCATCACTaGCCACGCATGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSFEVHH*PRMPGL
Trigger: CAGGCCTGGCATGCGTGGGCAGTGATGAACTTCGAA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGGCTCTTTAGGCCACTaGCAAACTGCTGCAGGACGC +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAGSLGH*QTAAGR
Trigger: GCGTCCTGCAGCAGTTTGCCAGTGGCCTAAAGAGCC...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGCTCCTTGGCGGCTTTaGCCCTGGTTTCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCAPWRL*PWFPHS
Trigger: GGAATGAGGAAACCAGGGCCAAAGCCGCCAAGGAGC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTATCTGCCAATTCGGGTaGCATTCCCACCTTCCACTC +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISICQFG*HSHLPL
Trigger: GAGTGGAAGGTGGGAATGCCACCCGAATTGGCAGAT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCTACATAGCCAGTGCTaGCCACCAACTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAALHSQC*PPTVPG
Trigger: CCCTGGGACAGTTGGTGGCCAGCACTGGCTATGTAG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTCACCATGGACACAGCTaGGTAGAACTCATCCAGAGG +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSHHGHS*VELIQR
Trigger: CCTCTGGATGAGTTCTACCCAGCTGTGTCCATGGTG...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCATCCAGCAGGTCCCTaGCCTTGTCAATGCACTGTT +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISHPAGP*PCQCTV
Trigger: AACAGTGCATTGACAAGGCCAGGGACCTGCTGGATG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTTCCTCTACGATACGCTaGCAGCCCTGCAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAASSTIR*QPCSLS
Trigger: GGAGAGACTGCAGGGCTGCCAGCGTATCGTAGAGGA...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGTAGCGATGGCATGCTaGGCCTGTTGCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCVAMAC*ACCCMV
Trigger: GACCATGCAGCAACAGGCCCAGCATGCCATCGCTAC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTCCCACCAAGGGTCTaGGCGTATCAATTCTTGCAA +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPVPPRV*AYQFLQ
Trigger: TTGCAAGAATTGATACGCCCAGACCCTTGGTGGGAC...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCATCTTCAGAATCTTGTTaGCTGCATTGTGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPSSESC*LHCAGL
Trigger: CAGCCCGGCACAATGCAGCCAACAAGATTCTGAAGA...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTCTCATGCCAGAGGATaGCCACTCGGATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSSHARG*PLGSAP
Trigger: AGGAGCTGATCCGAGTGGCCATCCTCTGGCATGAGA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATCACACGCTCATCCTaGCGCAGATCTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSITRSS*RRSSWP
Trigger: AGGCCATGAAGATCTGCGCCAGGATGAGCGTGTGAT...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGATGACAGCGTATCTCTaGATGCTGAGGTTTTTCCGA +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVMTAYL*MLRFFR
Trigger: TCGGAAAAACCTCAGCATCCAGAGATACGCTGTCAT...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTGCAGTGTGTCACAGTaGGGAACCCAGCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHCSVSQ*GTQPMR
Trigger: CCTCATTGGCTGGGTTCCCCACTGTGACACACTGCA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCAGCATCAGGTTGGATaGGTGTCTATCTCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSQHQVG*VSISQA
Trigger: GGCCTGGGAGATAGACACCCATCCAACCTGATGCTG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGTGAAGGGGGTAATGTaGCGAGGTTTTGTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSVKGVM*RGFVPK
Trigger: CTTCGGAACAAAACCTCGTCACATTACCCCCTTCAC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGGGAGGCATAGTCAGTaGAATCCAGGGACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCGRHSQ*NPGTPS
Trigger: TGACGGAGTCCCTGGATTTCACTGACTATGCCTCCC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTTGGACTGAATGCGAATaGTTGGCTGGTTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSWTECE*LAGWGH
Trigger: ATGACCCCAACCAGCCAATCATTCGCATTCAGTCCA...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGACGGTGCTATGGACTaGATGCGAATGATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSDGAMD*MRMIGW
Trigger: CCAGCCAATCATTCGCATTCAGTCCATAGCACCGTC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCCCCTGTAGTCCCGGATaGGGGCGTGCAGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCPCSPG*GRAVCH
Trigger: GTGACACACTGCACGCCCTCATCCGGGACTACAGGG...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGACCCAACCATTGACATaGCCGCTAAAGAACGGGTAT +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLTQPLT*PLKNGY
Trigger: ATACCCGTTCTTTAGCGGTCATGTCAATGGTTGGGT...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTAGAAGTCCCGACCAGTaGGCTTATCTCGAACCCTGT +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSRSPDQ*AYLEPC
Trigger: ACAGGGTTCGAGATAAGCTCACTGGTCGGGACTTCT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGACAAGCCTTGTGTTTCTaGCAATATATTCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGQALCF*QYILQQ
Trigger: CTGTTGAAGAATATATTGTCAGAAACACAAGGCTTG...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCAGCATCACTGGGTCTaGTGGAAGACAGACCTTTTG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISQHHWV*WKTDLL
Trigger: CAAAAGGTCTGTCTTCCATCAGACCCAGTGATGCTG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACGCTCACGCACAAACCTaGAGACCTAGGTACTCTGCA +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHAHAQT*RPRYSA
Trigger: TGCAGAGTACCTAGGTCTTCAGGTTTGTGCGTGAGC...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCCACTGGCAAACTGCTaGAGGACGCTCACATTGCTA +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSPLANC*RTLTLL
Trigger: TAGCAATGTGAGCGTCCTGCAGCAGTTTGCCAGTGG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTGCCAATGGCCTTGGATaGCATTTCCATGACAACTGG +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSANGLG*HFHDNW
Trigger: CCAGTTGTCATGGAAATGGCATCCAAGGCCATTGGC...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTTGGCGAAGGGGTTTGTaGATAAGGACCAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAWRRGL*IRTRDS
Trigger: GCTGTCCCTGGTCCTTATGCACAAACCCCTTCGCCA...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCTTCAAATTCAAAGCTaGCAAGCGTTCGGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLLQIQS*QAFGGQ
Trigger: TTGCCCTCCGAACGCTTGGCAGCTTTGAATTTGAAG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTTGCCACCACTTGCACTaGGGTCTGGCTAACCACATG +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAACHHLH*GLANHM
Trigger: CATGTGGTTAGCCAGACCGCAGTGCAAGTGGTGGCA...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTACCTGGGGCAGGAACTaGACACATTTGAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAATWGRN*THLSPR
Trigger: CCTGGGACTCAAATGTGTGCAGTTCCTGCCCCAGGT...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGCATCCTCCCACTCGTaGAGTTTCTCATACCAGGTA +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSASSHS*SFSYQV
Trigger: TACCTGGTATGAGAAACTGCACGAGTGGGAGGATGC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTAGAGGATGGTCAAGTTaGCGAGACGGATCAACTCCC +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSRGWSS*RDGSTP
Trigger: GGGAGTTGATCCGTCTCGGCAACTTGACCATCCTCT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTCTGGACAAAATGCTaGATGTGCTGGAAGGCATCG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISVWTKC*MCWKAS
Trigger: CGATGCCTTCCAGCACATGCAGCATTTTGTCCAGAC...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTTCGAAGTTCATCACTaGCCACGCATGCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHFEVHH*PRMPGL
Trigger: AAGGCCTGGCATGCGTGGGCAGTGATGAACTTCGAA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCCGCTCTCACTGTTGCTaGCCTCGGTGCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFRSHCC*PRCWQW
Trigger: CCACTGCCAGCACCGAGGGCAGCAACAGTGAGAGCG...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTTCATGCCACATCTCATaGCAGAGGATGGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAASCHIS*QRMATR
Trigger: CCGAGTGGCCATCCTCTGGCATGAGATGTGGCATGA...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTCTTCCAGGCCTTCATaGCACATCTCATGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHSSRPS*HISCQR
Trigger: CCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTCCAGCACCTCAAACATaGCTTTCACGTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSPAPQT*LSRSFP
Trigger: GGGAAAGGAACGTGAAAGGCATGTTTGAGGTGCTGG...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACCGTTCCATCATAGCATaGAAGGGCTCCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHRSIIA*KGSSTS
Trigger: TGAGGTGCTGGAGCCCTTGCATGCTATGATGGAACG...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCGCAACATGATGCGATaGTCGATGTTGAGAAGGATC +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLRNMMR*SMLRRI
Trigger: GATCCTTCTCAACATCGAGCATCGCATCATGTTGCG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTATGACACTGTCCTTGTaGTCTCGCAGCACCTCCATC +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSMTLSL*SRSTSI
Trigger: GATGGAGGTGCTGCGAGAGCACAAGGACAGTGTCAT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAATAACGTACTATGAGTaGACTGCGAGAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPITYYE*TARRAQ
Trigger: CTGTGCCCTTCTCGCAGTGCACTCATAGTACGTTAT...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTCATTTCCATGACAACTaGGTCATTGGAGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSHFHDN*VIGGEE
Trigger: CTCCTCCCCTCCAATGACCCAGTTGTCATGGAAATG...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTAAGGGTTGCACTTGCTaGAAGAAGAAGGTAGGGACG +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSKGCTC*KKKVGT
Trigger: CGTCCCTACCTTCTTCTTCCAGCAAGTGCAACCCTT...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTCCTTCGGCTCACGCTaGGTTGTGAGAATCAGACAG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHSFGSR*VVRIRQ
Trigger: CTGTCTGATTCTCACAACCCAGCGTGAGCCGAAGGA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGATTAAGGATTGTCATTTaGATCAGCGAGTTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGLRIVI*ISEFLL
Trigger: TAGCAAGAACTCGCTGATCCAAATGACAATCCTTAA...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTCCTTGATATCCTGCTaGATGCCTGGCCCCATTGCT +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSSLISC*MPGPIA
Trigger: AGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTGCAAGTTCTCCGCCTaGGCCAGGTGTGCATCAAAG +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCCKFSA*ARCASK
Trigger: CTTTGATGCACACCTGGCCCAGGCGGAGAACTTGCA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGAGGCATCCCGGGACTaGTCTATCATGCCAATGTTC +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSEASRD*SIMPMF
Trigger: GAACATTGGCATGATAGACCAGTCCCGGGATGCCTC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTATTGTCATCTCTCAGTaGCAGGGGGCCCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSIVISQ*QGALVT
Trigger: AGTGACAAGGGCCCCCTGCCACTGAGAGATGACAAT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTTCATACCAGGTAGCCTaGATCTCCAGCTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISSYQVA*ISSSPK
Trigger: CTTTGGAGAGCTGGAGATCCAGGCTACCTGGTATGA...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTAGCTCGGACAGCATGTaGCAAGAAACCATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAASSDSM*QETMAP
Trigger: TGGGGCCATGGTTTCTTGCCACATGCTGTCCGAGCT...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTAAATGCTGCATGTGCTaGAAGGCATCGATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISKCCMC*KASILR
Trigger: CCGCAAGATCGATGCCTTCCAGCACATGCAGCATTT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACAGCCAGGTATCAATCTaGATGGCTTTCACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHSQVSI*MAFTPS
Trigger: GGAGGGGGTGAAAGCCATCCAGATTGATACCTGGCT...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGTTTCCTTCAGAGTCTaGGGGCCCCGTTCCATCATA +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSVSFRV*GPRSII
Trigger: TATGATGGAACGGGGCCCCCAGACTCTGAAGGAAAC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACATCACACGCTCATCCTaGCGCAGATCTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHITRSS*RRSSWP
Trigger: AGGCCATGAAGATCTGCGCCAGGATGAGCGTGTGAT...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACGGTCCAGCATCAGGTTaGATGGGTGTCTATCTCCCA +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHGPASG*MGVYLP
Trigger: TGGGAGATAGACACCCATCCAACCTGATGCTGGACC...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCGTTTTCTTATGGGCTaGCTCTCCAAGTTCCACACC +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSRFLMG*LSKFHT
Trigger: GGTGTGGAACTTGGAGAGCCAGCCCATAAGAAAACG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTATGTTTCACTGTCCTaGGAACCAAATCAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIYVSLS*EPNQAL
Trigger: CAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGGCTGTTGTCATGCATaGAGACACGCAGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAGCCHA*RHAACV
Trigger: CACACATGCTGCGTGTCTTCATGCATGACAACAGCC...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGACGGTGCTATGGACTaGATGCGAATGATTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCDGAMD*MRMIGW
Trigger: CCAGCCAATCATTCGCATTCAGTCCATAGCACCGTC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTCGTATCTCTGGATGCTaGGGTTTTTCCGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSRISGC*GFSEEM
Trigger: CATCTCTTCGGAAAAACCTCAGCATCCAGAGATACG...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCGGGGAACCCAGCCAATaGGGCCCGAGTTGGTCGATA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCGEPSQ*GPSWSI
Trigger: TATCGACCAACTCGGGCCTCATTGGCTGGGTTCCCC...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCCCCAGCTGTATTATTaGCGGCATGCTCAAACACCT +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSPQLYY*RHAQTP
Trigger: AGGTGTTTGAGCATGCCGTCAATAATACAGCTGGGG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTACCCAACCATTGACATaGCCGCTAAAGAACGGGTAT +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISTQPLT*PLKNGY
Trigger: ATACCCGTTCTTTAGCGGTCATGTCAATGGTTGGGT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTCTCCAATGAAAGAATaGATAGATTCTGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILISPMKE*IDSGTV
Trigger: CACAGTGCCAGAATCTATTCATTCTTTCATTGGAGA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACCAGCATCACTGGGTCTaGTGGAAGACAGACCTTTTG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHQHHWV*WKTDLL
Trigger: CAAAAGGTCTGTCTTCCATCAGACCCAGTGATGCTG...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACAGAGCCACCTaGCTTTTGGCCAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAVHRAT*LLANKE
Trigger: CTCTTTGTTGGCCAAAAGGCAGGTGGCTCTGTGGAC...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACAGTTCCTGCTTATGCTaGTGGTCCTCAGTAGCGATG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHSSCLC*WSSVAM
Trigger: CATCGCTACTGAGGACCAGCAGCATAAGCAGGAACT...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTATCCTGGAGGTTGTTaGCTCGTGACAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHYPGGC*LVTRRW
Trigger: CCATCTCCTTGTCACGAGGCAACAACCTCCAGGATA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCAGAATCTTGTTGGCTaGATTGTGCCGGGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCQNLVG*IVPGCR
Trigger: ACGACAGCCCGGCACAATGCAGCCAACAAGATTCTG...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCGCAACATGATGCGATaGTCGATGTTGAGAAGGATC +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSRNMMR*SMLRRI
Trigger: GATCCTTCTCAACATCGAGCATCGCATCATGTTGCG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTAACACCTCCACCTTCTaGATCAGAGTCAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISNTSTF*IRVKWS
Trigger: TGACCACTTGACTCTGATGCAGAAGGTGGAGGTGTT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGATGAGCAGCTCAACTTaGGTTGGAACATCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLMSSST*VGTSKV
Trigger: CACTTTGGATGTTCCAACGCAAGTTGAGCTGCTCAT...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACAGGAACAGCTGCTCCTaGCTGTTCTGTGTGTCCATA +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHRNSCS*LFCVSI
Trigger: TATGGACACACAGAACAGGCAGGAGCAGCTGTTCCT...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTAAGGCATTTGACTGCTaGGGCTGTACAGCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSKAFDC*GCTAWK
Trigger: TTTCCAGGCTGTACAGCCCCAGCAGTCAAATGCCTT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCAACAAAGAGGAATCCTaGAGCATGTCCATGATGATA +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILINKEES*SMSMMI
Trigger: TATCATCATGGACATGCTCCAGGATTCCTCTTTGTT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAAACATTCCCAGCTGCTaGAACAAAAATTCCCGGATG +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPNIPSC*NKNSRM
Trigger: CATCCGGGAATTTTTGTTCCAGCAGCTGGGAATGTT...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTTGGCGCCAAACAGCTaGATTGCAGCCAGTAACTTG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHLAPNS*IAASNL
Trigger: CAAGTTACTGGCTGCAATCCAGCTGTTTGGCGCCAA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCGGGCCATCTTGGCTTaGGTCTCATCATTAACCAGG +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCRAILA*VSSLTR
Trigger: CCTGGTTAATGATGAGACCCAAGCCAAGATGGCCCG...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCGAACGGAAGAAGCCCTaGACGGCAGGCACCGTGTAC +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFERKKP*TAGTVY
Trigger: GTACACGGTGCCTGCCGTCCAGGGCTTCTTCCGTTC...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTCTTCAGAATCTTGTTaGCTGCATTGTGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHSSESC*LHCAGL
Trigger: CAGCCCGGCACAATGCAGCCAACAAGATTCTGAAGA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGTTTCCTTCAGAGTCTaGGGGCCCCGTTCCATCATA +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCVSFRV*GPRSII
Trigger: TATGATGGAACGGGGCCCCCAGACTCTGAAGGAAAC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAATGCGAATGATTGGCTaGTTGGGGTCATATGTTCCT +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPMRMIG*LGSYVP
Trigger: AGGAACATATGACCCCAACCAGCCAATCATTCGCAT...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCACTGAATGCGAATGATTaGCTGGTTGGGGTCATATGT +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPLNAND*LVGVIC
Trigger: ACATATGACCCCAACCAGCCAATCATTCGCATTCAG...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTTTTCCGAAGAGATGTTaGGTCATTGGCCAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSFPKRC*VIGQKG
Trigger: ACCCTTCTGGCCAATGACCCAACATCTCTTCGGAAA...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCATGGCAGAGGTTTTCATaGGATGTCGCTTGTTTGATG +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPWQRFS*DVACLM
Trigger: CATCAAACAAGCGACATCCCATGAAAACCTCTGCCA...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCGTGATGGGCACATCTaGGCCTCCAGTTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCRDGHI*ASSYQK
Trigger: TTTCTGGTAACTGGAGGCCCAGATGTGCCCATCACG...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCCAAACTTTCTCACCATaGTTTCAGTTTAGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIQTFSP*FQFSGS
Trigger: GCTTCCACTAAACTGAAACCATGGTGAGAAAGTTTG...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGACAGCAGCTAGAAAGTTaGTTCAAACCAACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: RSGLELKRVSRSITGSDGQQLES*FKPTFN
Trigger: ATTAAAAGTTGGTTTGAACCAACTTTCTAGCTGCTG...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTTCAAGAAGAGGGATTTaGGGTAGGTCTGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSSRRGI*GRSGRE
Trigger: CTCTCTTCCAGACCTACCCCAAATCCCTCTTCTTGA...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
3UTR CAA 72 bp CTGGGTCTGATGGAAGACAGACCTTTTGTACTCATTTaGGCCTATCTTGCAAACATTTCTGCTGCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LGLMEDRPFVLI*AYLANISAAVH
Trigger: GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTCCATCAGACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTGGATGCCATTTCCATaGCAACTGGGTCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCWMPFP*QLGHWR
Trigger: CCTCCAATGACCCAGTTGTCATGGAAATGGCATCCA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCATCCATATAAGGTCTaGTGTGGCTCTTCACAAAGG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISHPYKV*CGSSQR
Trigger: CCTTTGTGAAGAGCCACATCAGACCTTATATGGATG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTTAAGAGGGTCTGTGTaGCTTCAGCGATGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSLRGSV*LQRCLV
Trigger: CACAAGACATCGCTGAAGTCACACAGACCCTCTTAA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTGGACAGATCCTCAGTaGCCTTCTTCTGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCWTDPQ*PSSAAA
Trigger: CGCCGCTGCAGAAGAAGGTCACTGAGGATCTGTCCA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTATTCTTGCAATGAGCTaGGGTATAACCTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSILAMS*GITCSQ
Trigger: CTGGCTACAGGTTATACCTCAGCTCATTGCAAGAAT...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCAAAATTTCGACTaGCTGGCCAGCAGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAVQNFD*LASRVG
Trigger: TCCTACTCTGCTGGCCAGTCAGTCGAAATTTTGGAC...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGCTTCTTGGCTGTGCTaGGTTTGCTGTACCCATGTT +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCASWLC*VCCTHV
Trigger: AACATGGGTACAGCAAACTCAGCACAGCCAAGAAGC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCCTGTCCACAGACCAGTaGGGTCTTGGGATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCLSTDQ*GLGIGG
Trigger: GCCACCTATCCCAAGACCTCACTGGTCTGTGGACAG...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTTACTAAATTCAACATaGTCCACTCACTTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QSILTTENIPEPCCRRPVLLNST*STHFVE
Trigger: CTCCACAAAGTGAGTGGATCATGTTGAATTTAGTAA...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCCAGACACTGGAGCTGTaGCCAACAGCAGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCQTLEL*PTAGLR
Trigger: TCTGAGCCCTGCTGTTGGTCACAGCTCCAGTGTCTG...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTAAGAAGGGTTGCACTTaGTGGAAGAAGAAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSKKGCT*WKKKVG
Trigger: CCCTACCTTCTTCTTCCAGCAAGTGCAACCCTTCTT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCTTCCAATCCCACTGTaGTCCAACTCTGTCAAAATC +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISLPIPL*SNSVKI
Trigger: GATTTTGACAGAGTTGGAGCACAGTGGGATTGGAAG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTTGATGGTGCTGACGTaGAGTTTCTTCATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSLMVLT*SFFMGP
Trigger: AGGACCCATGAAGAAACTGCACGTCAGCACCATCAA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACCACCCAGCAGAACAATaGCATTGTCATCTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHHPAEQ*HCHLSV
Trigger: CACTGAGAGATGACAATGGCATTGTTCTGCTGGGTG...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGCCGCTGCCTCCGGCTaGTGTAGCTTATTATTAATG +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCAAASG*CSLLLM
Trigger: CATTAATAATAAGCTACAGCAGCCGGAGGCAGCGGC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTAGGTGTATTCTTCCATaGTGTCCCACTGACCTAAAC +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISRCILP*CPTDLN
Trigger: GTTTAGGTCAGTGGGACAGCATGGAAGAATACACCT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTATTTCATGTACTTCCTaGACCACTCTTGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSISCTS*TTLGPP
Trigger: TGGAGGCCCAAGAGTGGTGCAGGAAGTACATGAAAT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTAATTTCCGGGGCCTCTaGTTGGATGTGATGACTTGC +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAANFRGL*LDVMTC
Trigger: GCAAGTCATCACATCCAAGCAGAGGCCCCGGAAATT...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCACCAGGCCGAAGAGCTaGATCACACGCTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFTRPKS*ITRSSW
Trigger: CCAGGATGAGCGTGTGATGCAGCTCTTCGGCCTGGT...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTAACACCTCCACCTTCTaGATCAGAGTCAAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSNTSTF*IRVKWS
Trigger: TGACCACTTGACTCTGATGCAGAAGGTGGAGGTGTT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTTTCGGGATCGCTTGTTaGCTTTGGTATTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSFGIAC*LWYLCP
Trigger: TGGACACAAATACCAAAGGCAACAAGCGATCCCGAA...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTTTCGGGATCGCTTGTTaGCTTTGGTATTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISFGIAC*LWYLCP
Trigger: TGGACACAAATACCAAAGGCAACAAGCGATCCCGAA...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATGAGCAGCTCAACTTaGGTTGGAACATCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSMSSST*VGTSKV
Trigger: CACTTTGGATGTTCCAACGCAAGTTGAGCTGCTCAT...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTGCAAACATTTCTGCTaGTGTCCACAGACCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHCKHFC*CPQTSE
Trigger: CTCACTGGTCTGTGGACAGCAGCAGAAATGTTTGCA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTTCATGCCCTTCTCTTTaGCCAAGGTCTCATCAAATC +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSSCPSL*PRSHQI
Trigger: GATTTGATGAGACCTTGGCCAAAGAGAAGGGCATGA...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCATGGTTCATGGTATCTTaGAGATACTGGGTATCTGTG +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPWFMVS*RYWVSV
Trigger: CACAGATACCCAGTATCTCCAAGATACCATGAACCA...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCAGTGGCGAACAAATTaGGTCAGAGAGTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCQWRTN*VREWPS
Trigger: TGAAGGCCACTCTCTGACCCAATTTGTTCGCCACTG...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTAACTCTGTCAAAATCTaGATGAGCATCTTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISNSVKI*MSILRR
Trigger: CCTGCGCAAGATGCTCATCCAGATTTTGACAGAGTT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCGTTTGGATCAGGGTCTaGATCTTTCAGTTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: VAGVRSASSVSLQSRILIVWIRV*IFQFQN
Trigger: ATTTTGAAACTGAAAGATCCAGACCCTGATCCAAAC...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTCTCTGCGTGTACCCTaGTTCTGCTCAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCSLRVP*FCSVFR
Trigger: TCTGAAGACTGAGCAGAACCAGGGTACACGCAGAGA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCGTGCAGTTTCTTCATaGGTCCTGTTTCCACTGGTC +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAARAVSS*VLFPLV
Trigger: GACCAGTGGAAACAGGACCCATGAAGAAACTGCACG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGGCCTCATTGACATCTaGCCAGTGACCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSGLIDI*PVTIIK
Trigger: TTTGATTATGGTCACTGGCCAGATGTCAATGAGGCC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGCCTCATTGACATCTaGCCAGTGACCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISGLIDI*PVTIIK
Trigger: TTTGATTATGGTCACTGGCCAGATGTCAATGAGGCC...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCAGAAGCCACTGTCAGTaGGTAGATGAGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFRSHCQ*VDEGLG
Trigger: CCCCAGGCCCTCATCTACCCACTGACAGTGGCTTCT...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCACCATCATGGCCTGCTaGACCAGGGTGTTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCTIMAC*TRVLLC
Trigger: GCACAGCAACACCCTGGTCCAGCAGGCCATGATGGT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTCTGAATGCGAATGATTaGCTGGTTGGGGTCATATGT +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSLNAND*LVGVIC
Trigger: ACATATGACCCCAACCAGCCAATCATTCGCATTCAG...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCACCACACCTCGGAGCTaGGGCTTTTCAGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCTTPRS*GFSATA
Trigger: TGCTGTGGCTGAAAAGCCCCAGCTCCGAGGTGTGGT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTATCGCTTGTTGCCTTTaGTATTTGTGTCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISIACCL*YLCPSA
Trigger: GGCTGATGGACACAAATACCAAAGGCAACAAGCGAT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCAGCTCAACTTGCGTTaGAACATCCAAAGTGTCATC +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISQLNLR*NIQSVI
Trigger: GATGACACTTTGGATGTTCCAACGCAAGTTGAGCTG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCAGAGATGTGCAGATTaGTTCACGGGAAACAAGCCC +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAQRCAD*FTGNKP
Trigger: GGGCTTGTTTCCCGTGAACCAATCTGCACATCTCTG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCGCTCACGCTGGGTTGTaGGAATCAGACAGGCACGAA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCAHAGL*ESDRHE
Trigger: TTCGTGCCTGTCTGATTCTCACAACCCAGCGTGAGC...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTACTTCTTCCCCAGCTaGAAAACAAGTGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHYFFPS*KTSEDS
Trigger: GCTGTCTTCACTTGTTTTTCAGCTGGGGAAGAAGTA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTATGAGCTCATCCTGTTaGTCTTCATTCAGTTCAGAC +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISMSSSC*SSFSSD
Trigger: GTCTGAACTGAATGAAGATCAACAGGATGAGCTCAT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACAACACTAAAGTTTTATaGGCAAGAGCCAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHNTKVL*ARASLP
Trigger: TGGCAGGCTGGCTCTTGCTCATAAAACTTTAGTGTT...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGGATTGTGCTCTCATTaGTGCCCTGTAGATTCAGCT +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCGLCSH*CPVDSA
Trigger: AGCTGAATCTACAGGGCATCAATGAGAGCACAATCC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTTGGCCCCGCTGGCATaGCGCAGTTTCTTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCLAPLA*RSFFFS
Trigger: TGAGAAGAAGAAACTGCGTCATGCCAGCGGGGCCAA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACATTCTTGCAATGAGCTaGGGTATAACCTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHILAMS*GITCSQ
Trigger: CTGGCTACAGGTTATACCTCAGCTCATTGCAAGAAT...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCGTATCTCTGGATGCTaGGGTTTTTCCGAAGAGATG +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAARISGC*GFSEEM
Trigger: CATCTCTTCGGAAAAACCTCAGCATCCAGAGATACG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTGCGATGCTCGATGTTaGGAAGGATCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSCDARC*EGSSSS
Trigger: AGAAGAAGAAGATCCTTCTCAACATCGAGCATCGCA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTGCGATGCTCGATGTTaGGAAGGATCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHCDARC*EGSSSS
Trigger: AGAAGAAGAAGATCCTTCTCAACATCGAGCATCGCA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTTGCTGTACCCATGTTaGGAGGAGCAACTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCLLYPC*EEQLGH
Trigger: ATGACCTAGTTGCTCCTCTCAACATGGGTACAGCAA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCATGTTCTCCACGACCTaGGGCTTCTTGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFMFSTT*GFLAVL
Trigger: CAGCACAGCCAAGAAGCCTCAGGTCGTGGAGAACAT...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCAGGCCACTGGCAAACTaGTGCAGGACGCTCACATTG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFRPLAN*CRTLTL
Trigger: CAATGTGAGCGTCCTGCAGCAGTTTGCCAGTGGCCT...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGATAGTTGGCAAATCTaGCAATTCGGGTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAADSWQI*QFGWHS
Trigger: GGAATGCCACCCGAATTGGCAGATTTGCCAACTATC...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCACATCTGCCACCACTTaGACTGCGGTCTGGCTAACC +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFTSATT*TAVWLT
Trigger: GGTTAGCCAGACCGCAGTGCAAGTGGTGGCAGATGT...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCAGGCCACTAACCTGTaGCAATTCTCCTATTGTTGC +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAQATNL*QFSYCC
Trigger: GCAACAATAGGAGAATTGGCACAGGTTAGTGGCCTG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCCGGGCCATGAGCTTGTaGAGTTCCTGCTTATGCTGC +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFRAMSL*SSCLCC
Trigger: GCAGCATAAGCAGGAACTGCACAAGCTCATGGCCCG...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTCATGCCACATCTCATaGCAGAGGATGGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFSCHIS*QRMATR
Trigger: CCGAGTGGCCATCCTCTGGCATGAGATGTGGCATGA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGACTTGCAAAGACGGTaGTATGGACTGAATGCGAAT +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSDLQRR*YGLNAN
Trigger: ATTCGCATTCAGTCCATAGCACCGTCTTTGCAAGTC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACGTATTATTGACGGCATaGTCAAACACCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHVLLTA*SNTSTF
Trigger: GAAGGTGGAGGTGTTTGAGCATGCCGTCAATAATAC...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTCCCCAAAGTCAATGTaGAGGATCTTCCCACTCAGA +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCSPKSM*RIFPLR
Trigger: TCTGAGTGGGAAGATCCTGCACATTGACTTTGGGGA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCACATTTTGGCCTATCTTaGAAACATTTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KQSILTTENIPEPCCRRPHFGLS*KHFCCC
Trigger: ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATG...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCCAGAAAGCAGAGCTaGACTGGGTATAAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCPRKQS*TGYKVY
Trigger: GTACACTTTATACCCAGTGCAGCTCTGCTTTCTGGG...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGTATCTTGGAGATACTaGGTATCTGTGAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSVSWRY*VSVKAE
Trigger: TTCTGCCTTCACAGATACCCAGTATCTCCAAGATAC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCGGATCTCAAACACCTaGTCATTCAGAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCRISNT*SFRATN
Trigger: GTTTGTGGCTCTGAATGACCAGGTGTTTGAGATCCG...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCAACGTGGGCATGACCTaGGGCAGGAACTGCACACAT +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFNVGMT*GRNCTH
Trigger: ATGTGTGCAGTTCCTGCCCCAGGTCATGCCCACGTT...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCTCCAAAGTGTTTCATaGCATATTCTAACACTCCGG +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSLQSVS*HILTLR
Trigger: CCGGAGTGTTAGAATATGCCATGAAACACTTTGGAG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTCTCATGCCAGAGGATaGCCACTCGGATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCSHARG*PLGSAP
Trigger: AGGAGCTGATCCGAGTGGCCATCCTCTGGCATGAGA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGCACATCAGAAGTTTTaGGGAAACATATTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSAHQKF*GNILQL
Trigger: GAGCTGCAATATGTTTCCCCAAAACTTCTGATGTGC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGAAGAACGGGTATAATTaGTTCTTCGGTCAAACCACA +
Preference number: 4 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLKNGYN*FFGQTT
Trigger: TGTGGTTTGACCGAAGAACCAATTATACCCGTTCTT...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCAGCTCAACTTGCGTTaGAACATCCAAAGTGTCATC +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSQLNLR*NIQSVI
Trigger: GATGACACTTTGGATGTTCCAACGCAAGTTGAGCTG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCAGGGGAGAGCAGAAATaGCAAGCAGAAGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCRGEQK*QAEVGA
Trigger: TGCCCCCACTTCTGCTTGCCATTTCTGCTCTCCCCT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR TCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCCTCTCATTGGCATCTaGGCTGGAAACCAATTCAAA +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAPLIGI*AGNQFK
Trigger: TTTGAATTGGTTTCCAGCTCAGATGCCAATGAGAGG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCCTGAGGCAGCTGCTTTaGGATTCGTCGGAACACATG +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCLRQLL*DSSEHM
Trigger: CATGTGTTCCGACGAATCTCAAAGCAGCTGCCTCAG...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTTGTCAAAGAAGGGTTaGACTTGCTGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHLSKKG*TCWKKK
Trigger: CTTCTTCTTCCAGCAAGTGCAACCCTTCTTTGACAA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCCCTGGGCTGTTGTCATaGATGAAGACACGCAGCATG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFPGLLS*MKTRSM
Trigger: CATGCTGCGTGTCTTCATGCATGACAACAGCCCAGG...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCGCTGGACCAGGGTGTTaGTGTGCTCACACATGTTCT +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCAGPGC*CAHTCS
Trigger: AGAACATGTGTGAGCACAGCAACACCCTGGTCCAGC...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTATTATTGACGGCATaGTCAAACACCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAVLLTA*SNTSTF
Trigger: GAAGGTGGAGGTGTTTGAGCATGCCGTCAATAATAC...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCATGCTGAGGAACAGCTaGTCCTGCCTGTTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFMLRNS*SCLFCV
Trigger: CACACAGAACAGGCAGGAGCAGCTGTTCCTCAGCAT...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTGGCAAGACGGCCAATaGCCTTGGATGCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFWQDGQ*PWMPFP
Trigger: TGGAAATGGCATCCAAGGCCATTGGCCGTCTTGCCA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACAATTGGGTCAGAGAGTaGCCTTCAAATTCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHNWVRE*PSNSKL
Trigger: CAGCTTTGAATTTGAAGGCCACTCTCTGACCCAATT...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCGGTAGTCATCCAGGTTaGCGCCAAACAGCTGGATTG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFGSHPG*RQTAGL
Trigger: CAATCCAGCTGTTTGGCGCCAACCTGGATGACTACC...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCACTGTTGGCAGAGGATaGTCAAGTTGCCGAGACGGA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCTVGRG*SSCRDG
Trigger: TCCGTCTCGGCAACTTGACCATCCTCTGCCAACAGT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCGGGCCTGTTGCTGCATaGTCTGGACAAAATGCTGCA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCGPVAA*SGQNAA
Trigger: TGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCC...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGCACATCAGAAGTTTTaGGGAAACATATTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSAHQKF*GNILQL
Trigger: GAGCTGCAATATGTTTCCCCAAAACTTCTGATGTGC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTGGCGCAGATCTTCATaGCCTTTTAGAAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSWRRSS*PFRRKT
Trigger: TGTTTTCCTTCTAAAAGGCCATGAAGATCTGCGCCA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTAAGAACGGGTATAATTaGTTCTTCGGTCAAACCACA +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSKNGYN*FFGQTT
Trigger: TGTGGTTTGACCGAAGAACCAATTATACCCGTTCTT...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGATCCACTCACTTTGTaGAGCACTAACTATATAACG +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISDPLTL*STNYIT
Trigger: CGTTATATAGTTAGTGCTCCACAAAGTGAGTGGATC...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCACCCACTGGCACACCTaGTCAAATTTCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCTHWHT*SNFSSI
Trigger: GATGGAGGAGAAATTTGATCAGGTGTGCCAGTGGGT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTTCAGTAGCCCATCTTaGATGTCCTTCTTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCFSSPS*MSFFSC
Trigger: ACAGCTAAAGAAGGACATTCAAGATGGGCTACTGAA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTGGACTGAATGCGAATaGTTGGCTGGTTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCWTECE*LAGWGH
Trigger: ATGACCCCAACCAGCCAATCATTCGCATTCAGTCCA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTGGTCGATAAAGGGATaGCAGCGTATCTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCWSIKG*QRISGC
Trigger: GCATCCAGAGATACGCTGTCATCCCTTTATCGACCA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCCCCCAGCTGTATTATTaGCGGCATGCTCAAACACCT +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFPQLYY*RHAQTP
Trigger: AGGTGTTTGAGCATGCCGTCAATAATACAGCTGGGG...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCGTCCAAAATTTCGACTaGCTGGCCAGCAGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFVQNFD*LASRVG
Trigger: TCCTACTCTGCTGGCCAGTCAGTCGAAATTTTGGAC...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTCTCCAATGAAAGAATaGATAGATTCTGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSSPMKE*IDSGTV
Trigger: CACAGTGCCAGAATCTATTCATTCTTTCATTGGAGA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTCCAAAGTGTCATCATaGGAGAAGTCCCGACCAGTG +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCSKVSS*EKSRPV
Trigger: CACTGGTCGGGACTTCTCTCATGATGACACTTTGGA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTCCAAAGTGTCATCATaGGAGAAGTCCCGACCAGTG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFSKVSS*EKSRPV
Trigger: CACTGGTCGGGACTTCTCTCATGATGACACTTTGGA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTCAAGCCTTGTGTTTCTaGCAATATATTCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSQALCF*QYILQQ
Trigger: CTGTTGAAGAATATATTGTCAGAAACACAAGGCTTG...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCAATTCTCCTATTGTTaGCAGGACATTATTGATCAC +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSQFSYC*QDIIDH
Trigger: GTGATCAATAATGTCCTGGCAACAATAGGAGAATTG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTAGAGCTACCACAATTTaGTCAATGAGAAGAATGATC +
Preference number: 4 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISRATTI*SMRRMI
Trigger: GATCATTCTTCTCATTGAGCAAATTGTGGTAGCTCT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCAGCTTGTGCAGTTCCTaGTTATGCTGCTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCSLCSS*LCCWSS
Trigger: TGAGGACCAGCAGCATAAGCAGGAACTGCACAAGCT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTATCCTGGAGGTTGTTaGCTCGTGACAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCYPGGC*LVTRRW
Trigger: CCATCTCCTTGTCACGAGGCAACAACCTCCAGGATA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTTTGGGGAAACATATTaGAGCTCTAAGGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCFGETY*SSKDVS
Trigger: GCTCACATCCTTAGAGCTGCAATATGTTTCCCCAAA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACCATTTTGGCCTATCTTaGAAACATTTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RPFVLILAYLANISAAVHHFGLS*KHFCCC
Trigger: ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATG...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTTTAGGACATGGTTCATaGTATCTTGGAGATACTGGG +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAALGHGS*YLGDTG
Trigger: CCCAGTATCTCCAAGATACCATGAACCATGTCCTAA...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCGGGACAAGTTTGTACTaGATAACCTCCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFGTSLY*ITSSSS
Trigger: CGAGCTGGAGGAGGTTATCCAGTACAAACTTGTCCC...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCCTGAGGGTGAACTGTTaGCAGAGGATGGTCAAGTTG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFLRVNC*QRMVKL
Trigger: CAACTTGACCATCCTCTGCCAACAGTTCACCCTCAG...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCACTCTGAGTGTATCCTaGAGGTTGTTGCCTCGTGAC +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCTLSVS*RLLPRD
Trigger: GTCACGAGGCAACAACCTCCAGGATACACTCAGAGT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTGGCGCAGATCTTCATaGCCTTTTAGAAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCWRRSS*PFRRKT
Trigger: TGTTTTCCTTCTAAAAGGCCATGAAGATCTGCGCCA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTGTTCCCCAAAATGAATaGCTTGATTTACGTGGTATT +
Preference number: 4 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSVPQNE*LDLRGI
Trigger: AATACCACGTAAATCAAGCCATTCATTTTGGGGAAC...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCCTGTCAAAATCTGGATaGGCATCTTGCGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCLSKSG*ASCAGK
Trigger: CTTTCCTGCGCAAGATGCTCATCCAGATTTTGACAG...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCACAGGCTTGCATACTTaGGCCAGGTTCTCATGTCTT +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFTGLHT*ARFSCL
Trigger: AAGACATGAGAACCTGGCTCAAGTATGCAAGCCTGT...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR TCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTCACTGTGTGGCATGTaGTTCTGTAGTTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFSLCGM*FCSCHP
Trigger: TGGATGGCAACTACAGAATCACATGCCACACAGTGA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR TCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCCTATATAACGTACTATaGGTGCACTGCGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFLYNVL*VHCEKG
Trigger: GCCCTTCTCGCAGTGCACTCATAGTACGTTATATAG...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCAGCATGCGGGCACTCTaGTCTTTGATTCTTCCAATC +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFSMRAL*SLILPI
Trigger: GATTGGAAGAATCAAAGAGCAGAGTGCCCGCATGCT...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCGAGGTCCTGATGCAGTaGCAGCACAGCTCTATAAAA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCEVLMQ*QHSSIK
Trigger: TTTTATAGAGCTGTGCTGGCACTGCATCAGGACCTC...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTCATGTACTTCCTaGACCACTCTTGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCISCTS*TTLGPP
Trigger: TGGAGGCCCAAGAGTGGTGCAGGAAGTACATGAAAT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTCCCCAAAGTCAATGTaGAGGATCTTCCCACTCAGA +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFSPKSM*RIFPLR
Trigger: TCTGAGTGGGAAGATCCTGCACATTGACTTTGGGGA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTGCAAACATTTCTGCTaGTGTCCACAGACCAGTGAG +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCCKHFC*CPQTSE
Trigger: CTCACTGGTCTGTGGACAGCAGCAGAAATGTTTGCA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCGGTTCCGAAGATAGTTaGCAAATCTGCCAATTCGGG +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCGSEDS*QICQFG
Trigger: CCCGAATTGGCAGATTTGCCAACTATCTTCGGAACC...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCACAAAAATTCCCGGATaGCCCCATCACAGACTCGAA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCTKIPG*PHHRLE
Trigger: TTCGAGTCTGTGATGGGGCCATCCGGGAATTTTTGT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTGTTGCTGCATGGTCTaGACAAAATGCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFCCCMV*TKCCMC
Trigger: GCACATGCAGCATTTTGTCCAGACCATGCAGCAACA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTTCCTGCACCACTCTTaGGCCTCCATTAAATCTCGA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCFLHHS*ASIKSR
Trigger: TCGAGATTTAATGGAGGCCCAAGAGTGGTGCAGGAA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCACCATAAGGATTTTCTaGCAGTCCTCTACGATACGC +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCTIRIF*QSSTIR
Trigger: GCGTATCGTAGAGGACTGGCAGAAAATCCTTATGGT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTCTTGCAAACATTTCTaGTGCTGTCCACAGACCAGT +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFSCKHF*CCPQTS
Trigger: ACTGGTCTGTGGACAGCAGCAGAAATGTTTGCAAGA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCATTATTGATCACACCTaGGTTTGGATCAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFIIDHT*VWIRVW
Trigger: CCAGACCCTGATCCAAACCCAGGTGTGATCAATAAT...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCATGCGAATGATTGGCTaGTTGGGGTCATATGTTCCT +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCMRMIG*LGSYVP
Trigger: AGGAACATATGACCCCAACCAGCCAATCATTCGCAT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTTATTCTGATACAACATaGTGTCTAGACATGGCTACA +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAYSDTT*CLDMAT
Trigger: TGTAGCCATGTCTAGACACCATGTTGTATCAGAATA...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR GCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTTTGGGGAAACATATTaGAGCTCTAAGGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFFGETY*SSKDVS
Trigger: GCTCACATCCTTAGAGCTGCAATATGTTTCCCCAAA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCAGCAGCTAGAAAGTTaGTTCAAACCAACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: EDRPFVLILAYLANISAAQQLES*FKPTFN
Trigger: ATTAAAAGTTGGTTTGAACCAACTTTCTAGCTGCTG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCCAAACTTTCTCACCATaGTTTCAGTTTAGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFQTFSP*FQFSGS
Trigger: GCTTCCACTAAACTGAAACCATGGTGAGAAAGTTTG...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CCA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTATTCTGATACAACATaGTGTCTAGACATGGCTACA +
Preference number: 4 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCYSDTT*CLDMAT
Trigger: TGTAGCCATGTCTAGACACCATGTTGTATCAGAATA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 90 bp TGGTGGTGGCAGTGGCGGCCGTGGTGGCGGCAGTGGTGGCGTTGGTaGTGTTGGCCCCGCTGGCATGACGCAGTTTCTTCTTCTCATCGC +
Preference number: 5 (lower is better)
Translates to: WWWQWRPWWRQWWRW*CWPRWHDAVSSSHR
Trigger: GCGATGAGAAGAAGAAACTGCGTCATGCCAGCGGGGCCAACATCACCAACGCCACCACTGCCGCCACCACGGCCGCCACTGCCACCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 90 bp GGGCAGGGCTTAGTCCCACTGCCAGCATGGGCTCCAGCAGCTCCTTaGTATCCTGCTGGATGCCTGGCCCCATTGCTCGAGCCAGCATGC +
Preference number: 5 (lower is better)
Translates to: GQGLVPLPAWAPAAP*YPAGCLAPLLEPAC
Trigger: GCATGCTGGCTCGAGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCTGCTGGAGCCCATGCTGGCAGTGGGACTAAGCCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 90 bp AAGCCCATGAATGTGACCGTGCAGGGGATACATGCAGGCGAGGAGTaGGAGCGAGGCCAGCAAAGCACGCCTGGAGCAGGCACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: KPMNVTVQGIHAGEE*ERGQQSTPGAGTGL
Trigger: CAGCCCTGTGCCTGCTCCAGGCGTGCTTTGCTGGCCTCGCTCTCACTCCTCGCCTGCATGTATCCCCTGCACGGTCACATTCATGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS GCA 90 bp GTGCACTGCGAGAAGGGCACAGCAAGAGGAGCAGGAGAGAGCTCTTaGCTCAAGGGATCTCCCGGCCTCCTAGGGGAGCTCACGCACAAA +
Preference number: 5 (lower is better)
Translates to: VHCEKGTARGAGESS*LKGSPGLLGELTHK
Trigger: TTTGTGCGTGAGCTCCCCTAGGAGGCCGGGAGATCCCTTGAGGCAAGAGCTCTCTCCTGCTCCTCTTGCTGTGCCCTTCTCGCAGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS CCA 90 bp CTGCCCACGCATGCCAGGCCTTGTACCAGCTGCGGTCGTGCTCTGTaGCGGCGCTGTAGTACTGCAGCACTTTGGGGATTGTGCTCTCAT +
Preference number: 5 (lower is better)
Translates to: LPTHARPCTSCGRAL*RRCSTAALWGLCSH
Trigger: ATGAGAGCACAATCCCCAAAGTGCTGCAGTACTACAGCGCCGCCACAGAGCACGACCGCAGCTGGTACAAGGCCTGGCATGCGTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp CCACGCATGCCAGGCCTGGTTGGGGAGAAAGGCAAGGACAGACACTaGAGCTGTGACCAACAGCAGGGCTCAGAGGAGCGCAAGGTCGAT +
Preference number: 5 (lower is better)
Translates to: PRMPGLVGEKGKDRH*SCDQQQGSEERKVD
Trigger: ATCGACCTTGCGCTCCTCTGAGCCCTGCTGTTGGTCACAGCTCCAGTGTCTGTCCTTGCCTTTCTCCCCAACCAGGCCTGGCATGCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS GCA 90 bp CCAGCTCACGGAGAACCAGGACAGCTGCATGTCTCCGGCCCTCATTaGGGTCAGCACCCAGCCATTCCAGGGCTCGCTTCACCTCAAATT +
Preference number: 5 (lower is better)
Translates to: PAHGEPGQLHVSGPH*GQHPAIPGLASPQI
Trigger: AATTTGAGGTGAAGCGAGCCCTGGAATGGCTGGGTGCTGACCGCAATGAGGGCCGGAGACATGCAGCTGTCCTGGTTCTCCGTGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp AGTCCCACTGCCAGCATGGGCTCCAGCAGCTCCTTGATATCCTGCTaGATGCCTGGCCCCATTGCTCGAGCCAGCATGCTGATGCAAGTG +
Preference number: 5 (lower is better)
Translates to: SPTASMGSSSSLISC*MPGPIARASMLMQV
Trigger: CACTTGCATCAGCATGCTGGCTCGAGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCTGCTGGAGCCCATGCTGGCAGTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGCGGCAGTGGTGGCGTaGGTGATGTTGGCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: RSGLELKRVSRSITGSDGAAVVA*VMLAPL
Trigger: CAGCGGGGCCAACATCACCAACGCCACCACTGCCGC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 90 bp TGTACCACTGAGGCTTCTGCATCTCCTTCGGCTCACGCTGGGTTGTaGGAATCAGACAGGCACGAAGGGCGGCTACAGCTCCCTCACGGA +
Preference number: 5 (lower is better)
Translates to: CTTEASASPSAHAGL*ESDRHEGRLQLPHG
Trigger: TCCGTGAGGGAGCTGTAGCCGCCCTTCGTGCCTGTCTGATTCTCACAACCCAGCGTGAGCCGAAGGAGATGCAGAAGCCTCAGTGGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp GGGCTCCAGCAGCTCCTTGATATCCTGCTGGATGCCTGGCCCCATTaGTCGAGCCAGCATGCTGATGCAAGTGAAGACTGTGGCATCCAC +
Preference number: 5 (lower is better)
Translates to: GLQQLLDILLDAWPH*SSQHADASEDCGIH
Trigger: GTGGATGCCACAGTCTTCACTTGCATCAGCATGCTGGCTCGAGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCTGCTGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp CTTAGTCCCACTGCCAGCATGGGCTCCAGCAGCTCCTTGATATCCTaGTGGATGCCTGGCCCCATTGCTCGAGCCAGCATGCTGATGCAA +
Preference number: 5 (lower is better)
Translates to: LSPTASMGSSSSLIS*WMPGPIARASMLMQ
Trigger: TTGCATCAGCATGCTGGCTCGAGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCTGCTGGAGCCCATGCTGGCAGTGGGACTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp CATCAAGTCTCTGCAACACCGGCTCTCCACCAGGGTGGACTTAGCTaGACTGGGGGAGGTCCCAAATCCCATGAGGCCTTGGTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: HQVSATPALHQGGLS*TGGGPKSHEALVRA
Trigger: AGCTCTCACCAAGGCCTCATGGGATTTGGGACCTCCCCCAGTCCAGCTAAGTCCACCCTGGTGGAGAGCCGGTGTTGCAGAGACTTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp CGAGGCAGCGCATGCGGCCCAGCATCAGCTCTGGGTCGTCCTTGTTaGTGTCCATTTTCTTGTCATAGGCCACAAGGGCATCCTCCCACT +
Preference number: 5 (lower is better)
Translates to: RGSACGPASALGRPC*CPFSCHRPQGHPPT
Trigger: AGTGGGAGGATGCCCTTGTGGCCTATGACAAGAAAATGGACACCAACAAGGACGACCCAGAGCTGATGCTGGGCCGCATGCGCTGCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp TTCCCCCAAGGCCTCGAGGCAGCGCATGCGGCCCAGCATCAGCTCTaGGTCGTCCTTGTTGGTGTCCATTTTCTTGTCATAGGCCACAAG +
Preference number: 5 (lower is better)
Translates to: FPQGLEAAHAAQHQL*VVLVGVHFLVIGHK
Trigger: CTTGTGGCCTATGACAAGAAAATGGACACCAACAAGGACGACCCAGAGCTGATGCTGGGCCGCATGCGCTGCCTCGAGGCCTTGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp TCCCGGATCTCAAACACCTGGTCATTCAGAGCCACAAACAAGGCCTaGAAGTTCTCCGCCTGGGCCAGGTGTGCATCAAAGCGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: SRISNTWSFRATNKA*KFSAWARCASKRSS
Trigger: GGACGAGCGCTTTGATGCACACCTGGCCCAGGCGGAGAACTTGCAGGCCTTGTTTGTGGCTCTGAATGACCAGGTGTTTGAGATCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp GACAGGCACGAAGGGCGGCTACAGCTCCCTCACGGATGGCCTGTTTaGGGTCCCACACGGCCACAAAAATGTTGTCAAAGAAGGGTTGCA +
Preference number: 5 (lower is better)
Translates to: DRHEGRLQLPHGWPV*GPTRPQKCCQRRVA
Trigger: TGCAACCCTTCTTTGACAACATTTTTGTGGCCGTGTGGGACCCCAAACAGGCCATCCGTGAGGGAGCTGTAGCCGCCCTTCGTGCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp TGCCAGCATGGGCTCCAGCAGCTCCTTGATATCCTGCTGGATGCCTaGCCCCATTGCTCGAGCCAGCATGCTGATGCAAGTGAAGACTGT +
Preference number: 5 (lower is better)
Translates to: CQHGLQQLLDILLDA*PHCSSQHADASEDC
Trigger: ACAGTCTTCACTTGCATCAGCATGCTGGCTCGAGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCTGCTGGAGCCCATGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp AGGAAGCATCGGGCCATGAGCTTGTGCAGTTCCTGCTTATGCTGCTaGTCCTCAGTAGCGATGGCATGCTGGGCCTGTTGCTGCATGGTC +
Preference number: 5 (lower is better)
Translates to: RKHRAMSLCSSCLCC*SSVAMACWACCCMV
Trigger: GACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAAGCAGGAACTGCACAAGCTCATGGCCCGATGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS TCA 90 bp CCCCTGCCATGGCAAGACGGCCAATGGCCTTGGATGCCATTTCCATaGCAACTGGGTCATTGGAGGGGAGGAGGTTCCGAAGATAGTTGG +
Preference number: 5 (lower is better)
Translates to: PLPWQDGQWPWMPFP*QLGHWRGGGSEDSW
Trigger: CCAACTATCTTCGGAACCTCCTCCCCTCCAATGACCCAGTTGTCATGGAAATGGCATCCAAGGCCATTGGCCGTCTTGCCATGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 90 bp TCCAGTTCAGCAAGGGGTCATAGACAAAGGCTTCCAGCACGGCCATaGCACTGTCCTTGTGCTCTCGCAGCACCTCCATCACTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: SSSARGHRQRLPARP*HCPCALAAPPSLCG
Trigger: GCCACACAGTGATGGAGGTGCTGCGAGAGCACAAGGACAGTGTCATGGCCGTGCTGGAAGCCTTTGTCTATGACCCCTTGCTGAACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000455339.1
ENST00000473471.5
ENST00000490931.1
CDS GCA 90 bp CTCCTGGCAGCGCCCCAGGCCTTTTGGAGGTTGATGGTGCTGACGTaGAGTTTCTTCATGGGTCCTGTTTCCACTGGTCCACTAGCCAAT +
Preference number: 5 (lower is better)
Translates to: LLAAPQAFWRLMVLT*SFFMGPVSTGPLAN
Trigger: ATTGGCTAGTGGACCAGTGGAAACAGGACCCATGAAGAAACTGCACGTCAGCACCATCAACCTCCAAAAGGCCTGGGGCGCTGCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp GCGATGGCATGCTGGGCCTGTTGCTGCATGGTCTGGACAAAATGCTaGATGTGCTGGAAGGCATCGATCTTGCGGGCACTCTTCCACATG +
Preference number: 5 (lower is better)
Translates to: AMACWACCCMVWTKC*MCWKASILRALFHM
Trigger: CATGTGGAAGAGTGCCCGCAAGATCGATGCCTTCCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 90 bp GTAGCGATGGCATGCTGGGCCTGTTGCTGCATGGTCTGGACAAAATaGTGCATGTGCTGGAAGGCATCGATCTTGCGGGCACTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: VAMACWACCCMVWTK*CMCWKASILRALFH
Trigger: GTGGAAGAGTGCCCGCAAGATCGATGCCTTCCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CCA 90 bp CCTAAACCCCATGCAGCTGCAGCAGCCATCCGGGCCATCTTGGCTTaGGTCTCATCATTAACCAGGGTCCACTTTTCACAGCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: PKPHAAAAAIRAILA*VSSLTRVHFSQHCW
Trigger: CCAGCAGTGCTGTGAAAAGTGGACCCTGGTTAATGATGAGACCCAAGCCAAGATGGCCCGGATGGCTGCTGCAGCTGCATGGGGTTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp TGGTCCTCAGTAGCGATGGCATGCTGGGCCTGTTGCTGCATGGTCTaGACAAAATGCTGCATGTGCTGGAAGGCATCGATCTTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: WSSVAMACWACCCMV*TKCCMCWKASILRA
Trigger: TGCCCGCAAGATCGATGCCTTCCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CCA 90 bp TGGAGGTTGTTGCCTCGTGACAAGGAGATGGAACGGAAGAAGCCCTaGACGGCAGGCACCGTGTACATCAGGAGGGTTTTGGACAGATCC +
Preference number: 5 (lower is better)
Translates to: WRLLPRDKEMERKKP*TAGTVYIRRVLDRS
Trigger: GGATCTGTCCAAAACCCTCCTGATGTACACGGTGCCTGCCGTCCAGGGCTTCTTCCGTTCCATCTCCTTGTCACGAGGCAACAACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 90 bp TGTAGCACAGCTTCGAAGTTCATCACTGCCCACGCATGCCAGGCCTaGTTGGGGAGAAAGGCAAGGACAGACACTGGAGCTGTGACCAAC +
Preference number: 5 (lower is better)
Translates to: CSTASKFITAHACQA*LGRKARTDTGAVTN
Trigger: GTTGGTCACAGCTCCAGTGTCTGTCCTTGCCTTTCTCCCCAACCAGGCCTGGCATGCGTGGGCAGTGATGAACTTCGAAGCTGTGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CAA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGCCCCACCAAGGCATTaGACTGCTGGGGCTGTACAG +
Preference number: 5 (lower is better)
Translates to: RSGLELKRVSRSITGSDGAPPRH*TAGAVQ
Trigger: CTGTACAGCCCCAGCAGTCAAATGCCTTGGTGGGGC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 90 bp CGGGCAGCCTCCATGCGGATCTCCTTGTGCTCACTGTTCAGGAAATaGTCCGCACAGTGGCGAACAAATTGGGTCAGAGAGTGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: RAASMRISLCSLFRK*SAQWRTNWVREWPS
Trigger: TGAAGGCCACTCTCTGACCCAATTTGTTCGCCACTGTGCGGATCATTTCCTGAACAGTGAGCACAAGGAGATCCGCATGGAGGCTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 90 bp GATGAAGGTGATGGCCTGGACAACCATGGTGTGATGATGAGAGAGTaGCTGGTCTCGGAAGATCCGCATCAGGGCCACCATGGACACAGC +
Preference number: 5 (lower is better)
Translates to: DEGDGLDNHGVMMRE*LVSEDPHQGHHGHS
Trigger: GCTGTGTCCATGGTGGCCCTGATGCGGATCTTCCGAGACCAGTCACTCTCTCATCATCACACCATGGTTGTCCAGGCCATCACCTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 90 bp ATGAGGGCCTGGGGGTGGTACCGACCAATGTCTGTGAGAAGCTGGTaGATGAGACGTCCCACCAAGGGTCTGGGCGTATCAATTCTTGCA +
Preference number: 5 (lower is better)
Translates to: MRAWGWYRPMSVRSW*MRRPTKGLGVSILA
Trigger: TGCAAGAATTGATACGCCCAGACCCTTGGTGGGACGTCTCATTCACCAGCTTCTCACAGACATTGGTCGGTACCACCCCCAGGCCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 90 bp TGCTTATGCTGCTGGTCCTCAGTAGCGATGGCATGCTGGGCCTGTTaGTGCATGGTCTGGACAAAATGCTGCATGTGCTGGAAGGCATCG +
Preference number: 5 (lower is better)
Translates to: CLCCWSSVAMACWAC*CMVWTKCCMCWKAS
Trigger: CGATGCCTTCCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 90 bp TCTCCAAGTTTCAGGAAGCATCGGGCCATGAGCTTGTGCAGTTCCTaGTTATGCTGCTGGTCCTCAGTAGCGATGGCATGCTGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SPSFRKHRAMSLCSS*LCCWSSVAMACWAC
Trigger: ACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAAGCAGGAACTGCACAAGCTCATGGCCCGATGCTTCCTGAAACTTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 90 bp AGCTCCTCGCTCACCATCATGGCCTGCTGGACCAGGGTGTTGCTGTaGTCACACATGTTCTTCAGAATCTTGTTGGCTGCATTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: SSSLTIMACWTRVLL*SHMFFRILLAALCR
Trigger: CCGGCACAATGCAGCCAACAAGATTCTGAAGAACATGTGTGAGCACAGCAACACCCTGGTCCAGCAGGCCATGATGGTGAGCGAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 90 bp AATGCGGCCTGGGCTGTTGTCATGCATGAAGACACGCAGCATGTGTaGGATCAGCTGGGGCAGGTAGAGCTTAAATTCACCCCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: NAAWAVVMHEDTQHV*DQLGQVELKFTPKS
Trigger: GCTCTTGGGGGTGAATTTAAGCTCTACCTGCCCCAGCTGATCCCACACATGCTGCGTGTCTTCATGCATGACAACAGCCCAGGCCGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp TGCAGTTCCTGCTTATGCTGCTGGTCCTCAGTAGCGATGGCATGCTaGGCCTGTTGCTGCATGGTCTGGACAAAATGCTGCATGTGCTGG +
Preference number: 5 (lower is better)
Translates to: CSSCLCCWSSVAMAC*ACCCMVWTKCCMCW
Trigger: CCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAAGCAGGAACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS-3UTR CAA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTTCAGCCACAGCAGCTaGGCCAGGTCGTCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: VAGVRSASSVSLQSRILIFSHSS*ARSSPA
Trigger: AGCTGGGGACGACCTGGCCAAGCTGCTGTGGCTGAA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 90 bp GGGCATTGGAGACCAGGTGCCCCAGCATGCGGGCACTCTGCTCTTTaGTTCTTCCAATCCCACTGTGCTCCAACTCTGTCAAAATCTGGA +
Preference number: 5 (lower is better)
Translates to: GHWRPGAPACGHSAL*FFQSHCAPTLSKSG
Trigger: TCCAGATTTTGACAGAGTTGGAGCACAGTGGGATTGGAAGAATCAAAGAGCAGAGTGCCCGCATGCTGGGGCACCTGGTCTCCAATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp GGGTCCCACACGGCCACAAAAATGTTGTCAAAGAAGGGTTGCACTTaGTGGAAGAAGAAGGTAGGGACGCTGATGGCCAGCTCACGGAGA +
Preference number: 5 (lower is better)
Translates to: GSHTATKMLSKKGCT*WKKKVGTLMASSRR
Trigger: TCTCCGTGAGCTGGCCATCAGCGTCCCTACCTTCTTCTTCCAGCAAGTGCAACCCTTCTTTGACAACATTTTTGTGGCCGTGTGGGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp TTATGCTGCTGGTCCTCAGTAGCGATGGCATGCTGGGCCTGTTGCTaGATGGTCTGGACAAAATGCTGCATGTGCTGGAAGGCATCGATC +
Preference number: 5 (lower is better)
Translates to: LCCWSSVAMACWACC*MVWTKCCMCWKASI
Trigger: GATCGATGCCTTCCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 90 bp TTGTGCAGTTCCTGCTTATGCTGCTGGTCCTCAGTAGCGATGGCATaGTGGGCCTGTTGCTGCATGGTCTGGACAAAATGCTGCATGTGC +
Preference number: 5 (lower is better)
Translates to: LCSSCLCCWSSVAMA*WACCCMVWTKCCMC
Trigger: GCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAAGCAGGAACTGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 90 bp AAGTACAAACGAGATGCCTCTTCCAGGCCTTCATGCCACATCTCATaGCAGAGGATGGCCACTCGGATCAGCTCCTCGCTCACCATCATG +
Preference number: 5 (lower is better)
Translates to: KYKRDASSRPSCHIS*QRMATRISSSLTIM
Trigger: CATGATGGTGAGCGAGGAGCTGATCCGAGTGGCCATCCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGAGGCATCTCGTTTGTACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 90 bp TTCCTTTCCCCAAAGTACAAACGAGATGCCTCTTCCAGGCCTTCATaGCACATCTCATGCCAGAGGATGGCCACTCGGATCAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: FLSPKYKRDASSRPS*HISCQRMATRISSS
Trigger: CGAGGAGCTGATCCGAGTGGCCATCCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGAGGCATCTCGTTTGTACTTTGGGGAAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 90 bp CAGATCTGGCGGATGATCTCTCGTCGCTCGGGGACAAGTTTGTACTaGATAACCTCCTCCAGCTCGGACAGCATGTGGCAAGAAACCATG +
Preference number: 5 (lower is better)
Translates to: QIWRMISRRSGTSLY*ITSSSSDSMWQETM
Trigger: CATGGTTTCTTGCCACATGCTGTCCGAGCTGGAGGAGGTTATCCAGTACAAACTTGTCCCCGAGCGACGAGAGATCATCCGCCAGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS-3UTR CAA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCACGCATGCCAGGCCTaGTACCAGCTGCGGTCGTGC +
Preference number: 5 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLHACQA*YQLRSC
Trigger: GCACGACCGCAGCTGGTACAAGGCCTGGCATGCGTG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAATCTTGTTGGCTGCATaGTGCCGGGCTGTCGTGGTA +
Preference number: 5 (lower is better)
Translates to: RSGLELKRVSRSITGSDGILLAA*CRAVVV
Trigger: TACCACGACAGCCCGGCACAATGCAGCCAACAAGAT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCGCCATGACACTGTCCTaGTGCTCTCGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: VAGVRSASSVSLQSRILIAMTLS*CSRSTS
Trigger: GGAGGTGCTGCGAGAGCACAAGGACAGTGTCATGGC...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 90 bp GTAGCCCCAGGGCTTGGAAGGCCGCTGTACGTTCCTTCTCCTTCTTaGCACAGCTTAGGACATGGTTCATGGTATCTTGGAGATACTGGG +
Preference number: 5 (lower is better)
Translates to: VAPGLGRPLYVPSPS*HSLGHGSWYLGDTG
Trigger: CCCAGTATCTCCAAGATACCATGAACCATGTCCTAAGCTGTGTCAAGAAGGAGAAGGAACGTACAGCGGCCTTCCAAGCCCTGGGGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 90 bp TTGCCGCACAGGCTTGCATACTTGAGCCAGGTTCTCATGTCTTCATaGGGGCTGACCACAAGGGACCGCACCATAAGGATTTTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LPHRLAYLSQVLMSS*GLTTRDRTIRIFCQ
Trigger: CTGGCAGAAAATCCTTATGGTGCGGTCCCTTGTGGTCAGCCCTCATGAAGACATGAGAACCTGGCTCAAGTATGCAAGCCTGTGCGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361445.9
ENST00000476768.1
ENST00000495435.1
CDS TCA 90 bp TGGCGGCGCTGTAGTACTGCAGCACTTTGGGGATTGTGCTCTCATTaGTGCCCTGTAGATTCAGCTGCCACTCTCCAAGTTTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: WRRCSTAALWGLCSH*CPVDSAATLQVSGS
Trigger: GCTTCCTGAAACTTGGAGAGTGGCAGCTGAATCTACAGGGCATCAATGAGAGCACAATCCCCAAAGTGCTGCAGTACTACAGCGCCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 90 bp TCGCTTCACCTCAAATTCCACGTACTCAGCGGTAAAAGTGTCCCCTaGCATGGCAAGACGGCCAATGGCCTTGGATGCCATTTCCATGAC +
Preference number: 5 (lower is better)
Translates to: SLHLKFHVLSGKSVP*HGKTANGLGCHFHD
Trigger: GTCATGGAAATGGCATCCAAGGCCATTGGCCGTCTTGCCATGGCAGGGGACACTTTTACCGCTGAGTACGTGGAATTTGAGGTGAAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp ACTCGAATGACGTTAAGGAACGTGGGCATGACCTGGGGCAGGAACTaGACACATTTGAGTCCCAGGGACTTGAAGATGAAGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: TRMTLRNVGMTWGRN*THLSPRDLKMKVMA
Trigger: GGCCATCACCTTCATCTTCAAGTCCCTGGGACTCAAATGTGTGCAGTTCCTGCCCCAGGTCATGCCCACGTTCCTTAACGTCATTCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp CTTGTCAATGCACTGTTGTGCCAAGGAGAAGAGGTCCTGATGCAGTaGCAGCACAGCTCTATAAAATGCCCCATCATGGGTGTCCCGAGG +
Preference number: 5 (lower is better)
Translates to: LVNALLCQGEEVLMQ*QHSSIKCPIMGVPR
Trigger: CCTCGGGACACCCATGATGGGGCATTTTATAGAGCTGTGCTGGCACTGCATCAGGACCTCTTCTCCTTGGCACAACAGTGCATTGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp GGATCAGCTCCTCGCTCACCATCATGGCCTGCTGGACCAGGGTGTTaGTGTGCTCACACATGTTCTTCAGAATCTTGTTGGCTGCATTGT +
Preference number: 5 (lower is better)
Translates to: GSAPRSPSWPAGPGC*CAHTCSSESCWLHC
Trigger: ACAATGCAGCCAACAAGATTCTGAAGAACATGTGTGAGCACAGCAACACCCTGGTCCAGCAGGCCATGATGGTGAGCGAGGAGCTGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 90 bp AAGGATGTTTCCTTCAGAGTCTGGGGGCCCCGTTCCATCATAGCATaGAAGGGCTCCAGCACCTCAAACATGCCTTTCACGTTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: KDVSFRVWGPRSIIA*KGSSTSNMPFTFLS
Trigger: GGAAAGGAACGTGAAAGGCATGTTTGAGGTGCTGGAGCCCTTGCATGCTATGATGGAACGGGGCCCCCAGACTCTGAAGGAAACATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 90 bp GATGTTGGGTCATTGGCCAGAAGGGTGTTAACCAGGCCGAAGAGCTaGATCACACGCTCATCCTGGCGCAGATCTTCATGGCCTTTTAGA +
Preference number: 5 (lower is better)
Translates to: DVGSLARRVLTRPKS*ITRSSWRRSSWPFR
Trigger: TCTAAAAGGCCATGAAGATCTGCGCCAGGATGAGCGTGTGATGCAGCTCTTCGGCCTGGTTAACACCCTTCTGGCCAATGACCCAACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 90 bp TTCTCTCGGGTCATAGCAACCTCAAAGCAGTCCCCAAAGTCAATGTaGAGGATCTTCCCACTCAGACGGTCCAGCATCAGGTTGGATGGG +
Preference number: 5 (lower is better)
Translates to: FSRVIATSKQSPKSM*RIFPLRRSSIRLDG
Trigger: CCCATCCAACCTGATGCTGGACCGTCTGAGTGGGAAGATCCTGCACATTGACTTTGGGGACTGCTTTGAGGTTGCTATGACCCGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000455339.1
ENST00000490931.1
CDS CCA 90 bp TCCCACACGGCCACAAAAATGTTGTCAAAGAAGGGTTGCACTTGCTaGAAGAAGAAGGTAGGGACGCTGATGGCCAGCTCACGGAGAACC +
Preference number: 5 (lower is better)
Translates to: SHTATKMLSKKGCTC*KKKVGTLMASSRRT
Trigger: GGTTCTCCGTGAGCTGGCCATCAGCGTCCCTACCTTCTTCTTCCAGCAAGTGCAACCCTTCTTTGACAACATTTTTGTGGCCGTGTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp ACCTTAAACTCAGACCTCACAGCCACAGAAAGTAGCCCCAGGGCTTaGAAGGCCGCTGTACGTTCCTTCTCCTTCTTGACACAGCTTAGG +
Preference number: 5 (lower is better)
Translates to: TLNSDLTATESSPRA*KAAVRSFSFLTQLR
Trigger: CCTAAGCTGTGTCAAGAAGGAGAAGGAACGTACAGCGGCCTTCCAAGCCCTGGGGCTACTTTCTGTGGCTGTGAGGTCTGAGTTTAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp GGTACTTCTTCCCCAGCTGAAAAACAAGTGAAGACAGCGTGTCCATaGCTGTGGAGCGCAGTTCTGGGCTCTGGTCCAGTGTTCGAACAA +
Preference number: 5 (lower is better)
Translates to: GTSSPAEKQVKTACP*LWSAVLGSGPVFEQ
Trigger: TTGTTCGAACACTGGACCAGAGCCCAGAACTGCGCTCCACAGCCATGGACACGCTGTCTTCACTTGTTTTTCAGCTGGGGAAGAAGTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCAGCTCCTTGGCGGCTTaGGCCCTGGTTTCCTCATTC +
Preference number: 5 (lower is better)
Translates to: VAGVRSASSVSLQSRILISSLAA*ALVSSF
Trigger: GAATGAGGAAACCAGGGCCAAAGCCGCCAAGGAGCT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGCGAGTAGACTCCTCTaGACTCATCTCTCGGAGTTC +
Preference number: 5 (lower is better)
Translates to: RSGLELKRVSRSITGSDGASRLL*THLSEF
Trigger: GAACTCCGAGAGATGAGTCAAGAGGAGTCTACTCGC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCCACATCTGCCACCACTaGCACTGCGGTCTGGCTAAC +
Preference number: 5 (lower is better)
Translates to: VAGVRSASSVSLQSRILIHICHH*HCGLAN
Trigger: GTTAGCCAGACCGCAGTGCAAGTGGTGGCAGATGTG...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGCACTGCTGGTGGAGTaGACCCCATTCCCCCAAGGC +
Preference number: 5 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLALLVE*TPFPQG
Trigger: GCCTTGGGGGAATGGGGTCAACTCCACCAGCAGTGC...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 90 bp TTTTCAGCCACAGCAGCTTGGCCAGGTCGTCCCCAGCTGTATTATTaGCGGCATGCTCAAACACCTCCACCTTCTGCATCAGAGTCAAGT +
Preference number: 5 (lower is better)
Translates to: FSATAAWPGRPQLYY*RHAQTPPPSASESS
Trigger: ACTTGACTCTGATGCAGAAGGTGGAGGTGTTTGAGCATGCCGTCAATAATACAGCTGGGGACGACCTGGCCAAGCTGCTGTGGCTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 90 bp TGTTTGGGGTCCCACACGGCCACAAAAATGTTGTCAAAGAAGGGTTaGACTTGCTGGAAGAAGAAGGTAGGGACGCTGATGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: CLGSHTATKMLSKKG*TCWKKKVGTLMASS
Trigger: TGAGCTGGCCATCAGCGTCCCTACCTTCTTCTTCCAGCAAGTGCAACCCTTCTTTGACAACATTTTTGTGGCCGTGTGGGACCCCAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp AGCACTTTGGGGATTGTGCTCTCATTGATGCCCTGTAGATTCAGCTaGCACTCTCCAAGTTTCAGGAAGCATCGGGCCATGAGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: STLGIVLSLMPCRFS*HSPSFRKHRAMSLC
Trigger: GCACAAGCTCATGGCCCGATGCTTCCTGAAACTTGGAGAGTGGCAGCTGAATCTACAGGGCATCAATGAGAGCACAATCCCCAAAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CCA 90 bp CATGGCAAGACGGCCAATGGCCTTGGATGCCATTTCCATGACAACTaGGTCATTGGAGGGGAGGAGGTTCCGAAGATAGTTGGCAAATCT +
Preference number: 5 (lower is better)
Translates to: HGKTANGLGCHFHDN*VIGGEEVPKIVGKS
Trigger: AGATTTGCCAACTATCTTCGGAACCTCCTCCCCTCCAATGACCCAGTTGTCATGGAAATGGCATCCAAGGCCATTGGCCGTCTTGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp ATGCTGCTGATTCGGACCAGCTCGTTAAGGATCAACAAGGCTCCATaGATCCGATCATCCCGATTCATGCCCTTCTCTTTGGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: MLLIRTSSLRINKAP*IRSSRFMPFSLAKV
Trigger: GACCTTGGCCAAAGAGAAGGGCATGAATCGGGATGATCGGATCCATGGAGCCTTGTTGATCCTTAACGAGCTGGTCCGAATCAGCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp CCACATGTTTTTCATGTAGGCATAGGTCACCTGAGGGTGAACTGTTaGCAGAGGATGGTCAAGTTGCCGAGACGGATCAACTCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PHVFHVGIGHLRVNC*QRMVKLPRRINSQE
Trigger: CTCCTGGGAGTTGATCCGTCTCGGCAACTTGACCATCCTCTGCCAACAGTTCACCCTCAGGTGACCTATGCCTACATGAAAAACATGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361445.9
ENST00000476768.1
ENST00000495435.1
CDS CCA 90 bp GAGCGAAGCAGATTAGGCGAGCATTCTGGAGAAGGTGGTCTGTTCTaGATGCATTGGGATACAGACCTTGCGGGCACTCTTCCACATGTT +
Preference number: 5 (lower is better)
Translates to: ERSRLGEHSGEGGLF*MHWDTDLAGTLPHV
Trigger: AACATGTGGAAGAGTGCCCGCAAGGTCTGTATCCCAATGCATCCAGAACAGACCACCTTCTCCAGAATGCTCGCCTAATCTGCTTCGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476768.1
CDS-3UTR CAA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCATGACAACTGGGTCATaGGAGGGGAGGAGGTTCCGA +
Preference number: 5 (lower is better)
Translates to: VAGVRSASSVSLQSRILIMTTGS*EGRRFR
Trigger: TCGGAACCTCCTCCCCTCCAATGACCCAGTTGTCAT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGGGTGGCGAAGGGGTTaGTGCATAAGGACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: KQSILTTENIPEPCCRRPGWRRG*CIRTRD
Trigger: GTCCCTGGTCCTTATGCACAAACCCCTTCGCCACCC...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGACAGAGGAATCCTGACTaGACTTGGATTCTGACAGGC +
Preference number: 5 (lower is better)
Translates to: RSGLELKRVSRSITGSDGQRNPD*TWILTG
Trigger: GCCTGTCAGAATCCAAGTCAAGTCAGGATTCCTCTG...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGCAGGCCTTTTGGAGGTaGATGGTGCTGACGTGCAGT +
Preference number: 5 (lower is better)
Translates to: QSILTTENIPEPCCRRPVQAFWR*MVLTCS
Trigger: ACTGCACGTCAGCACCATCAACCTCCAAAAGGCCTG...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGCGGCAGTGGTGGCGTaGGTGATGTTGGCCCCGCTG +
Preference number: 5 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCAAVVA*VMLAPL
Trigger: CAGCGGGGCCAACATCACCAACGCCACCACTGCCGC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTGCTGGACCAGGGTGTaGCTGTGCTCACACATGTTC +
Preference number: 5 (lower is better)
Translates to: QSILTTENIPEPCCRRPVCWTRV*LCSHMF
Trigger: GAACATGTGTGAGCACAGCAACACCCTGGTCCAGCA...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAGCTTGGGTGAGGTCCTaGACATTCCCTGATTTCATG +
Preference number: 5 (lower is better)
Translates to: RSGLELKRVSRSITGSDGAWVRS*TFPDFM
Trigger: CATGAAATCAGGGAATGTCAAGGACCTCACCCAAGC...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTTTCAGCCACAGCAGCTaGGCCAGGTCGTCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISFSHSS*ARSSPA
Trigger: AGCTGGGGACGACCTGGCCAAGCTGCTGTGGCTGAA...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGCCATGACACTGTCCTaGTGCTCTCGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLAMTLS*CSRSTS
Trigger: GGAGGTGCTGCGAGAGCACAAGGACAGTGTCATGGC...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGAGCAGGAGAGAGCTCTaGCCTCAAGGGATCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLSRREL*PQGISR
Trigger: CCGGGAGATCCCTTGAGGCAAGAGCTCTCTCCTGCT...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS TCA 90 bp CACACGAAAGCACCCGCAGGCTCCACGGCAGAGTCTCCTGCTCTCTaGCTATTTCACGCAGGTTATGGTCAATTCTGTAATGCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: HTKAPAGSTAESPAL*LFHAGYGQFCNAFC
Trigger: ACAGAAAGCATTACAGAATTGACCATAACCTGCGTGAAATAGTCAGAGAGCAGGAGACTCTGCCGTGGAGCCTGCGGGTGCTTTCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490931.1
CDS TCA 90 bp CTCTTGTGTATCTGCTATGTGCCTGGCAATGACCTGGGGTCAAGGTaGACAAGACAAACAGTCCTGGCATGCATACAGGGCCATGACGTT +
Preference number: 5 (lower is better)
Translates to: LLCICYVPGNDLGSR*TRQTVLACIQGHDV
Trigger: AACGTCATGGCCCTGTATGCATGCCAGGACTGTTTGTCTTGTTCACCTTGACCCCAGGTCATTGCCAGGCACATAGCAGATACACAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS GCA 90 bp CCGAAGCCCATGAGATCTTTGCAGTACTTGTCGTGTACCAGCTGCTaGTGTGTGATTTCTTCCATTTCTTCTCTCAGACGCTCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: PKPMRSLQYLSCTSC*CVISSISSLRRSPS
Trigger: GGAGGGAGAGCGTCTGAGAGAAGAAATGGAAGAAATCACACAGCAGCAGCTGGTACACGACAAGTACTGCAAAGATCTCATGGGCTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp AGGCCGAAGAGCTGCATCACACGCTCATCCTGGCGCAGATCTTCATaGCCTTTTAGAAGGAAAACAAACTCATGTCCGTTGCTGCCCATA +
Preference number: 5 (lower is better)
Translates to: RPKSCITRSSWRRSS*PFRRKTNSCPLLPI
Trigger: TATGGGCAGCAACGGACATGAGTTTGTTTTCCTTCTAAAAGGCCATGAAGATCTGCGCCAGGATGAGCGTGTGATGCAGCTCTTCGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 90 bp AGTCAATGTGCAGGATCTTCCCACTCAGACGGTCCAGCATCAGGTTaGATGGGTGTCTTTGAGAAACAGAAGACAGATCAGGGAGGGATC +
Preference number: 5 (lower is better)
Translates to: SQCAGSSHSDGPASG*MGVFEKQKTDQGGI
Trigger: GATCCCTCCCTGATCTGTCTTCTGTTTCTCAAAGACACCCATCCAACCTGATGCTGGACCGTCTGAGTGGGAAGATCCTGCACATTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455339.1
ENST00000490931.1
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTGTCTCCGGCCCTCATaGCGGTCAGCACCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHCLRPS*RSAPSH
Trigger: ATGGCTGGGTGCTGACCGCAATGAGGGCCGGAGACA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTATGGGCGAAGTCCTTaGGGGGCAGGGCCGCTCGGA +
Preference number: 5 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCYGRSP*GAGPLG
Trigger: TCCGAGCGGCCCTGCCCCCAAAGGACTTCGCCCATA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACGCCAGCCTGCCACTCTaGCCGCACAGGCTTGCATAC +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHASLPL*PHRLAY
Trigger: GTATGCAAGCCTGTGCGGCAAGAGTGGCAGGCTGGC...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCAGTGTATCCTGGAGGTaGTTGCCTCGTGACAAGGAG +
Preference number: 5 (lower is better)
Translates to: VAGVRSASSVSLQSRILISVSWR*LPRDKE
Trigger: CTCCTTGTCACGAGGCAACAACCTCCAGGATACACT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAATGTTCTTCAGAATCTaGTTGGCTGCATTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: RSGLELKRVSRSITGSDGMFFRI*LAALCR
Trigger: CCGGCACAATGCAGCCAACAAGATTCTGAAGAACAT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTTCCGGGGCCTCTGCTaGGATGTGATGACTTGCAAA +
Preference number: 5 (lower is better)
Translates to: QSILTTENIPEPCCRRPVFRGLC*DVMTCK
Trigger: TTTGCAAGTCATCACATCCAAGCAGAGGCCCCGGAA...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 90 bp TGCTATAGTCAGAGGAATCCTGACTTGACTTGGATTCTGACAGGCTaGCAGCAGAGGCATCCCGGGACTGGTCTATCATGCCAATGTTCA +
Preference number: 5 (lower is better)
Translates to: CYSQRNPDLTWILTG*QQRHPGTGLSCQCS
Trigger: TGAACATTGGCATGATAGACCAGTCCCGGGATGCCTCTGCTGTCAGCCTGTCAGAATCCAAGTCAAGTCAGGATTCCTCTGACTATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp GTTCCGAAGCCCATGAGATCTTTGCAGTACTTGTCGTGTACCAGCTaGTGCTGTGTGATTTCTTCCATTTCTTCTCTCAGACGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: VPKPMRSLQYLSCTS*CCVISSISSLRRSP
Trigger: GGGAGAGCGTCTGAGAGAAGAAATGGAAGAAATCACACAGCAGCAGCTGGTACACGACAAGTACTGCAAAGATCTCATGGGCTTCGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp CAATTTCCGGGGCCTCTGCTTGGATGTGATGACTTGCAAAGACGGTaGTATGGACTGAATGCGAATGATTGGCTGGTTGGGGTCATATGT +
Preference number: 5 (lower is better)
Translates to: QFPGPLLGCDDLQRR*YGLNANDWLVGVIC
Trigger: ACATATGACCCCAACCAGCCAATCATTCGCATTCAGTCCATAGCACCGTCTTTGCAAGTCATCACATCCAAGCAGAGGCCCCGGAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 90 bp GGTCGGAATGCAGCCAAGCGGGGCAACAAATTAAGGATTGTCATTTaGATCAGCGAGTTCTTGCTATTCCTGCATTTCAGCACCCACTGG +
Preference number: 5 (lower is better)
Translates to: GRNAAKRGNKLRIVI*ISEFLLFLHFSTHW
Trigger: CCAGTGGGTGCTGAAATGCAGGAATAGCAAGAACTCGCTGATCCAAATGACAATCCTTAATTTGTTGCCCCGCTTGGCTGCATTCCGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp AATGTGCAGGATCTTCCCACTCAGACGGTCCAGCATCAGGTTGGATaGGTGTCTTTGAGAAACAGAAGACAGATCAGGGAGGGATCAACA +
Preference number: 5 (lower is better)
Translates to: NVQDLPTQTVQHQVG*VSLRNRRQIREGST
Trigger: TGTTGATCCCTCCCTGATCTGTCTTCTGTTTCTCAAAGACACCCATCCAACCTGATGCTGGACCGTCTGAGTGGGAAGATCCTGCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455339.1
ENST00000490931.1
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTTCACGGATGGCCTGTTaGGGGTCCCACACGGCCACA +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAASRMAC*GSHTAT
Trigger: TGTGGCCGTGTGGGACCCCAAACAGGCCATCCGTGA...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGCATATGCTCGGCACTaGGCAGCTCTCTCACCCAGC +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSAYARH*AALSPS
Trigger: GCTGGGTGAGAGAGCTGCCAAGTGCCGAGCATATGC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCGCTCGGGGACAAGTTaGTACTGGATAACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLRSGTS*YWITSS
Trigger: GGAGGAGGTTATCCAGTACAAACTTGTCCCCGAGCG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGGGGATTGTGCTCTCATaGATGCCCTGTAGATTCAGC +
Preference number: 5 (lower is better)
Translates to: QSILTTENIPEPCCRRPVGIVLS*MPCRFS
Trigger: GCTGAATCTACAGGGCATCAATGAGAGCACAATCCC...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCATGCTGGACCAGGGTGTaGCTGTGCTCACACATGTTC +
Preference number: 5 (lower is better)
Translates to: KQSILTTENIPEPCCRRPCWTRV*LCSHMF
Trigger: GAACATGTGTGAGCACAGCAACACCCTGGTCCAGCA...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCAGAGATGTTGGGTCATaGGCCAGAAGGGTGTTAACC +
Preference number: 5 (lower is better)
Translates to: VAGVRSASSVSLQSRILIRDVGS*ARRVLT
Trigger: GGTTAACACCCTTCTGGCCAATGACCCAACATCTCT...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CGGTCAGGTCTTGAATTGAAGCGTGTGAGTCGCAGCATCACTGGGTCTGATGGAATGCGATGCTCGATGTaGAGAAGGATCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RSGLELKRVSRSITGSDGMRCSM*RRIFFF
Trigger: GAAGAAGAAGATCCTTCTCAACATCGAGCATCGCAT...TCCATCAGACCCAGTGATGCTGCGACTCACACGCTTCAATTCAAGACCTGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCTCCCCAGCTGTATTATaGACGGCATGCTCAAACACC +
Preference number: 5 (lower is better)
Translates to: VAGVRSASSVSLQSRILISPAVL*TACSNT
Trigger: GGTGTTTGAGCATGCCGTCAATAATACAGCTGGGGA...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCGGTCCAGCATCAGGTaGGATGGGTGTCTATCTCCC +
Preference number: 5 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISRSSIR*DGCLSP
Trigger: GGGAGATAGACACCCATCCAACCTGATGCTGGACCG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTGGGATGTCGCTTGTTaGATGAGCAGCTCAACTTGC +
Preference number: 5 (lower is better)
Translates to: QSILTTENIPEPCCRRPVWDVAC*MSSSTC
Trigger: GCAAGTTGAGCTGCTCATCAAACAAGCGACATCCCA...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 90 bp ATTTGGATAAAGGAATACTACTCTCTCTGGGGTTCTGAGCGGCAATaGCTCTACAGCGTACCACCACTTGGTTTAGCGAGTGTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: IWIKEYYSLWGSERQ*LYSVPPLGLASVRQ
Trigger: CTGCCTCACACTCGCTAAACCAAGTGGTGGTACGCTGTAGAGTCATTGCCGCTCAGAACCCCAGAGAGAGTAGTATTCCTTTATCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS TCA 90 bp GCTGGTGCTTATTTGGATAAAGGAATACTACTCTCTCTGGGGTTCTaGGCGGCAATGACTCTACAGCGTACCACCACTTGGTTTAGCGAG +
Preference number: 5 (lower is better)
Translates to: AGAYLDKGILLSLGF*AAMTLQRTTTWFSE
Trigger: CTCGCTAAACCAAGTGGTGGTACGCTGTAGAGTCATTGCCGCTCAGAACCCCAGAGAGAGTAGTATTCCTTTATCCAAATAAGCACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS GCA 90 bp TTCTGGAGAAGGTGGTCTGTTCTGGATGCATTGGGATACAGACCTTaGGGGCACTCTTCCACATGTTTTTCATGTAGGCATAGGTCACCT +
Preference number: 5 (lower is better)
Translates to: FWRRWSVLDALGYRP*GHSSTCFSCRHRSP
Trigger: AGGTGACCTATGCCTACATGAAAAACATGTGGAAGAGTGCCCGCAAGGTCTGTATCCCAATGCATCCAGAACAGACCACCTTCTCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476768.1
CDS CCA 90 bp ACTCCAGTTCTTTGTAGTGTAGTGCTTTGGCATATGCTCGGCACTTaGCAGCTCTCTCACCCAGCAGAACAATGCCATTGTCATCTCTCA +
Preference number: 5 (lower is better)
Translates to: TPVLCSVVLWHMLGT*QLSHPAEQCHCHLS
Trigger: TGAGAGATGACAATGGCATTGTTCTGCTGGGTGAGAGAGCTGCCAAGTGCCGAGCATATGCCAAAGCACTACACTACAAAGAACTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp TGTGATGACTTGCAAAGACGGTGCTATGGACTGAATGCGAATGATTaGCTGGTTGGGGTCATATGTTCCTGGCACAGCCAATTCAAGGTC +
Preference number: 5 (lower is better)
Translates to: CDDLQRRCYGLNAND*LVGVICSWHSQFKV
Trigger: GACCTTGAATTGGCTGTGCCAGGAACATATGACCCCAACCAGCCAATCATTCGCATTCAGTCCATAGCACCGTCTTTGCAAGTCATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 90 bp AGAAGGGTGTTAACCAGGCCGAAGAGCTGCATCACACGCTCATCCTaGCGCAGATCTTCATGGCCTTTTAGAAGGAAAACAAACTCATGT +
Preference number: 5 (lower is better)
Translates to: RRVLTRPKSCITRSS*RRSSWPFRRKTNSC
Trigger: ACATGAGTTTGTTTTCCTTCTAAAAGGCCATGAAGATCTGCGCCAGGATGAGCGTGTGATGCAGCTCTTCGGCCTGGTTAACACCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 90 bp TGCCTGGCAATGACCTGGGGTCAAGGTGAACAAGACAAACAGTCCTaGCATGCATACAGGGCCATGACGTTGATGGTAGAATACATCATA +
Preference number: 5 (lower is better)
Translates to: CLAMTWGQGEQDKQS*HAYRAMTLMVEYII
Trigger: TATGATGTATTCTACCATCAACGTCATGGCCCTGTATGCATGCCAGGACTGTTTGTCTTGTTCACCTTGACCCCAGGTCATTGCCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS-3UTR CAA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGGGCAAGTTTCCCATGTaGACCAGCATTTCACTAGTG +
Preference number: 5 (lower is better)
Translates to: QSILTTENIPEPCCRRPVGKFPM*TSISLV
Trigger: CACTAGTGAAATGCTGGTCAACATGGGAAACTTGCC...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTAGCGCCCCAGGCCTTTaGGAGGTTGATGGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCSAPGL*EVDGAD
Trigger: GTCAGCACCATCAACCTCCAAAAGGCCTGGGGCGCT...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCCGGGCCATCTTGGCTaGGGTCTCATCATTAACCAG +
Preference number: 5 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSPGHLG*GLIINQ
Trigger: CTGGTTAATGATGAGACCCAAGCCAAGATGGCCCGG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCATCGGGCCATGAGCTaGTGCAGTTCCTGCTTATGC +
Preference number: 5 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSHRAMS*CSSCLC
Trigger: GCATAAGCAGGAACTGCACAAGCTCATGGCCCGATG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGAGTGTATCCTGGAGGTaGTTGCCTCGTGACAAGGAG +
Preference number: 5 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLSVSWR*LPRDKE
Trigger: CTCCTTGTCACGAGGCAACAACCTCCAGGATACACT...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGCGAATGATTGGCTGGTaGGGGTCATATGTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLRMIGW*GSYVPG
Trigger: GCCAGGAACATATGACCCCAACCAGCCAATCATTCG...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GTGGCAGGGGTGAGGTCAGCATCTTCTGTGTCTTTACAGTCTAGGATCCTAATCGATCGCTTGTTGCCTTaGGTATTTGTGTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: VAGVRSASSVSLQSRILIDRLLP*VFVSIS
Trigger: GCTGATGGACACAAATACCAAAGGCAACAAGCGATC...GATTAGGATCCTAGACTGTAAAGACACAGAAGATGCTGACCTCACCCCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGGCAGCTCAACTTGCGTaGGAACATCCAAAGTGTCAT +
Preference number: 5 (lower is better)
Translates to: QSILTTENIPEPCCRRPVAAQLA*EHPKCH
Trigger: ATGACACTTTGGATGTTCCAACGCAAGTTGAGCTGC...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCGGTCAGGTCTTGAATaGAAGCGTGTGAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSRSGLE*KRVSRS
Trigger: GCTGCGACTCACACGCTTCAATTCAAGACCTGACCG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 90 bp ACAAGGCTCCATGGATCCGATCATCCCGATTCATGCCCTTCTCTTTaGCCAAGGTCTCATCAAATCCCTTCTCTGCTTCTTCAAATGTGT +
Preference number: 5 (lower is better)
Translates to: TRLHGSDHPDSCPSL*PRSHQIPSLLLQMC
Trigger: ACACATTTGAAGAAGCAGAGAAGGGATTTGATGAGACCTTGGCCAAAGAGAAGGGCATGAATCGGGATGATCGGATCCATGGAGCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp AAGGCCGCTGTACGTTCCTTCTCCTTCTTGACACAGCTTAGGACATaGTTCATGGTATCTTGGAGATACTGGGTATCTGTGAAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: KAAVRSFSFLTQLRT*FMVSWRYWVSVKAE
Trigger: TTCTGCCTTCACAGATACCCAGTATCTCCAAGATACCATGAACCATGTCCTAAGCTGTGTCAAGAAGGAGAAGGAACGTACAGCGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp GTTTTCATGGGATGTCGCTTGTTTGATGAGCAGCTCAACTTGCGTTaGAACATCCAAAGTGTCATCATGAGAGAAGTCCCGACCAGTGAG +
Preference number: 5 (lower is better)
Translates to: VFMGCRLFDEQLNLR*NIQSVIMREVPTSE
Trigger: CTCACTGGTCGGGACTTCTCTCATGATGACACTTTGGATGTTCCAACGCAAGTTGAGCTGCTCATCAAACAAGCGACATCCCATGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000473471.5
ENST00000490931.1
CDS CCA 90 bp AGATTAGGCGAGCATTCTGGAGAAGGTGGTCTGTTCTGGATGCATTaGGATACAGACCTTGCGGGCACTCTTCCACATGTTTTTCATGTA +
Preference number: 5 (lower is better)
Translates to: RLGEHSGEGGLFWMH*DTDLAGTLPHVFHV
Trigger: TACATGAAAAACATGTGGAAGAGTGCCCGCAAGGTCTGTATCCCAATGCATCCAGAACAGACCACCTTCTCCAGAATGCTCGCCTAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476768.1
CDS-3UTR CAA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGTTCATGCCCTTCTCTTaGGCCAAGGTCTCATCAAAT +
Preference number: 5 (lower is better)
Translates to: QSILTTENIPEPCCRRPVFMPFS*AKVSSN
Trigger: ATTTGATGAGACCTTGGCCAAAGAGAAGGGCATGAA...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACAAATCCCATGAGGCCTaGGTGAGAGCTGTACCCCAG +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHKSHEA*VRAVPQ
Trigger: CTGGGGTACAGCTCTCACCAAGGCCTCATGGGATTT...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGGCTCCAGCAGCTCCTaGATATCCTGCTGGATGCCT +
Preference number: 5 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCGSSSS*ISCWMP
Trigger: AGGCATCCAGCAGGATATCAAGGAGCTGCTGGAGCC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTAGAGCCACCTGCCTTTaGGCCAACAAAGAGGAATCC +
Preference number: 5 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSRATCL*ANKEES
Trigger: GGATTCCTCTTTGTTGGCCAAAAGGCAGGTGGCTCT...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTTTGAGTCCCAGGGACTaGAAGATGAAGGTGATGGCC +
Preference number: 5 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISLSPRD*KMKVMA
Trigger: GGCCATCACCTTCATCTTCAAGTCCCTGGGACTCAA...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTATGCGGCCTGGGCTGTaGTCATGCATGAAGACACGC +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAAMRPGL*SCMKTR
Trigger: GCGTGTCTTCATGCATGACAACAGCCCAGGCCGCAT...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTAGCCAATGCATCCCCTaGGCCACTCCTAAGCATCCG +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAASQCIP*ATPKHP
Trigger: CGGATGCTTAGGAGTGGCCAAGGGGATGCATTGGCT...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTAGTGGCAGGGGGCCCTaGTCACTGTGTTCCATGAAT +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSSGRGP*SLCSMN
Trigger: ATTCATGGAACACAGTGACAAGGGCCCCCTGCCACT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGAGCAGAACAATGCCATaGTCATCTCTCAGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLSRTMP*SSLSGR
Trigger: CCTGCCACTGAGAGATGACAATGGCATTGTTCTGCT...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACCAGAGGATGGTCAAGTaGCCGAGACGGATCAACTCC +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHQRMVK*PRRINS
Trigger: GGAGTTGATCCGTCTCGGCAACTTGACCATCCTCTG...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTATAGAGGTCCCAGGCTaGGGTGAGGTCCTTGACATT +
Preference number: 5 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISIEVPG*GEVLDI
Trigger: AATGTCAAGGACCTCACCCAAGCCTGGGACCTCTAT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAGTGACAAACTCATGTCCGTaGCTGCCCATAAGTGTCAAT +
Preference number: 5 (lower is better)
Translates to: QSILTTENIPEPCCRRPVTNSCP*LPISVN
Trigger: ATTGACACTTATGGGCAGCAACGGACATGAGTTTGT...CACTGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCGGTCCAGCATCAGGTaGGATGGGTGTCTATCTCCC +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAARSSIR*DGCLSP
Trigger: GGGAGATAGACACCCATCCAACCTGATGCTGGACCG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 90 bp AGAGCTGCACTGGGTATAAAGTGTACATTTAGGGGAGAGCAGAAATaGCAAGCAGAAGTGGGGGCAAGCAGCAGTCATCACAATATTTCA +
Preference number: 5 (lower is better)
Translates to: RAALGIKCTFRGEQK*QAEVGASSSHHNIS
Trigger: TGAAATATTGTGATGACTGCTGCTTGCCCCCACTTCTGCTTGCCATTTCTGCTCTCCCCTAAATGTACACTTTATACCCAGTGCAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCGGGCACTCTGCTCTTaGATTCTTCCAATCCCACTG +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSRALCS*ILPIPL
Trigger: CAGTGGGATTGGAAGAATCAAAGAGCAGAGTGCCCG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAATTGCAGCCAGTAACTaGATAGAGACAATGCGGCCT +
Preference number: 5 (lower is better)
Translates to: KQSILTTENIPEPCCRRPIAASN*IETMRP
Trigger: AGGCCGCATTGTCTCTATCAAGTTACTGGCTGCAAT...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTGCCATCCGGGCCATCTaGGCTTGGGTCTCATCATTA +
Preference number: 5 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCAIRAI*AWVSSL
Trigger: TAATGATGAGACCCAAGCCAAGATGGCCCGGATGGC...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTCTTGTCAATGCACTGTaGTGCCAAGGAGAAGAGGTC +
Preference number: 5 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSLVNAL*CQGEEV
Trigger: GACCTCTTCTCCTTGGCACAACAGTGCATTGACAAG...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGTATCCTGGAGGTTGTaGCCTCGTGACAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSVSWRL*PRDKEM
Trigger: CATCTCCTTGTCACGAGGCAACAACCTCCAGGATAC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTATCTTGTTGGCTGCATaGTGCCGGGCTGTCGTGGTA +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAAILLAA*CRAVVV
Trigger: TACCACGACAGCCCGGCACAATGCAGCCAACAAGAT...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTATAGAGGTCCCAGGCTaGGGTGAGGTCCTTGACATT +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSIEVPG*GEVLDI
Trigger: AATGTCAAGGACCTCACCCAAGCCTGGGACCTCTAT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACGCTGAGGCAGCTGCTTaGAGATTCGTCGGAACACAT +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHAEAAA*RFVGTH
Trigger: ATGTGTTCCGACGAATCTCAAAGCAGCTGCCTCAGC...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTAGAGATGTTGGGTCATaGGCCAGAAGGGTGTTAACC +
Preference number: 5 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISRDVGS*ARRVLT
Trigger: GGTTAACACCCTTCTGGCCAATGACCCAACATCTCT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCCAATGAGGCCCGAGTaGGTCGATAAAGGGATGACA +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSPMRPE*VDKGMT
Trigger: TGTCATCCCTTTATCGACCAACTCGGGCCTCATTGG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTGTTCGGGATCGCTTGTaGCCTTTGGTATTTGTGTCC +
Preference number: 5 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSVRDRL*PLVFVS
Trigger: GGACACAAATACCAAAGGCAACAAGCGATCCCGAAC...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTCATGGGATGTCGCTaGTTTGATGAGCAGCTCAAC +
Preference number: 5 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLFMGCR*FDEQLN
Trigger: GTTGAGCTGCTCATCAAACAAGCGACATCCCATGAA...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCATTTGCTGTACCCATGTaGAGAGGAGCAACTAGGTCA +
Preference number: 5 (lower is better)
Translates to: KQSILTTENIPEPCCRRPFAVPM*RGATRS
Trigger: TGACCTAGTTGCTCCTCTCAACATGGGTACAGCAAA...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCGGTCAGGTCTTGAATaGAAGCGTGTGAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAARSGLE*KRVSRS
Trigger: GCTGCGACTCACACGCTTCAATTCAAGACCTGACCG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 90 bp GAGGCTAGCTATGGCCAAGATGCCACCTTTCCTCTCATTGGCATCTaGGCTGGAAACCAATTCAAAAATGTGATGGTTCAGTTGGTCATA +
Preference number: 5 (lower is better)
Translates to: EASYGQDATFPLIGI*AGNQFKNVMVQLVI
Trigger: TATGACCAACTGAACCATCACATTTTTGAATTGGTTTCCAGCTCAGATGCCAATGAGAGGAAAGGTGGCATCTTGGCCATAGCTAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 90 bp AAGTGTTTCATGGCATATTCTAACACTCCGGCCGCTGCCTCCGGCTaGTGTAGCTTATTATTAATGCTGATGAGAGATTCTAGAATGGCA +
Preference number: 5 (lower is better)
Translates to: KCFMAYSNTPAAASG*CSLLLMLMRDSRMA
Trigger: TGCCATTCTAGAATCTCTCATCAGCATTAATAATAAGCTACAGCAGCCGGAGGCAGCGGCCGGAGTGTTAGAATATGCCATGAAACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp AGGGTCCACAGAGCCACCTGCCTTTTGGCCAACAAAGAGGAATCCTaGAGCATGTCCATGATGATAATAAAAAGTTCATCAACCCATTTC +
Preference number: 5 (lower is better)
Translates to: RVHRATCLLANKEES*SMSMMIIKSSSTHF
Trigger: GAAATGGGTTGATGAACTTTTTATTATCATCATGGACATGCTCCAGGATTCCTCTTTGTTGGCCAAAAGGCAGGTGGCTCTGTGGACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 90 bp GAGAAGTCCCGACCAGTGAGCTTATCTCGAACCCTGTTAATAATCTaGATAGCTTTCTTATTTAGGGCCTCTGGTTTCACCAAACCGTCT +
Preference number: 5 (lower is better)
Translates to: EKSRPVSLSRTLLII*IAFLFRASGFTKPS
Trigger: AGACGGTTTGGTGAAACCAGAGGCCCTAAATAAGAAAGCTATCCAGATTATTAACAGGGTTCGAGATAAGCTCACTGGTCGGGACTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000473471.5
ENST00000490931.1
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTAGATCTTTGCAGTACTaGTCGTGTACCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSRSLQY*SCTSCC
Trigger: GCAGCAGCTGGTACACGACAAGTACTGCAAAGATCT...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTAAGCCCATGAGATCTTaGCAGTACTTGTCGTGTACC +
Preference number: 5 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSKPMRS*QYLSCT
Trigger: GGTACACGACAAGTACTGCAAAGATCTCATGGGCTT...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACCGTTCCTTCTCCTTCTaGACACAGCTTAGGACATGG +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHRSFSF*TQLRTW
Trigger: CCATGTCCTAAGCTGTGTCAAGAAGGAGAAGGAACG...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTACAGTGGCGAACAAATaGGGTCAGAGAGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAATVANK*GQRVAF
Trigger: GAAGGCCACTCTCTGACCCAATTTGTTCGCCACTGT...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTCCATGCGGATCTCCTaGTGCTCACTGTTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSSMRIS*CSLFRK
Trigger: TTTCCTGAACAGTGAGCACAAGGAGATCCGCATGGA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACATCTGGATGAGCATCTaGCGCAGGAAAGGCATGACA +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHIWMSI*RRKGMT
Trigger: TGTCATGCCTTTCCTGCGCAAGATGCTCATCCAGAT...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTGCCAGGACATTATaGATCACACCTGGGTTTGGA +
Preference number: 5 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISVARTL*ITPGFG
Trigger: TCCAAACCCAGGTGTGATCAATAATGTCCTGGCAAC...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACCTTCTCATCGCGGGCTaGGTTCTGATGTTTGTAGTG +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHLLIAG*VLMFVV
Trigger: CACTACAAACATCAGAACCAAGCCCGCGATGAGAAG...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTACATCAGGAGGGTTTaGGACAGATCCTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSYIRRV*DRSSVT
Trigger: GGTCACTGAGGATCTGTCCAAAACCCTCCTGATGTA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATGTTCTTCAGAATCTaGTTGGCTGCATTGTGCCGG +
Preference number: 5 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSMFFRI*LAALCR
Trigger: CCGGCACAATGCAGCCAACAAGATTCTGAAGAACAT...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGCTGAGGCAGCTGCTTaGAGATTCGTCGGAACACAT +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAAAEAAA*RFVGTH
Trigger: ATGTGTTCCGACGAATCTCAAAGCAGCTGCCTCAGC...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCGAATGATTGGCTGGTaGGGGTCATATGTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAARMIGW*GSYVPG
Trigger: GCCAGGAACATATGACCCCAACCAGCCAATCATTCG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTTTTCCGAAGAGATGTaGGGTCATTGGCCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSFSEEM*GHWPEG
Trigger: CCCTTCTGGCCAATGACCCAACATCTCTTCGGAAAA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCAATGAGGCCCGAGTaGGTCGATAAAGGGATGACA +
Preference number: 5 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCPMRPE*VDKGMT
Trigger: TGTCATCCCTTTATCGACCAACTCGGGCCTCATTGG...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTTGTTGCCTTTGGTATTaGTGTCCATCAGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSCCLWY*CPSASS
Trigger: ACTGGAGGCTGATGGACACAAATACCAAAGGCAACA...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTTGTTGCCTTTGGTATTaGTGTCCATCAGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSCCLWY*CPSASS
Trigger: ACTGGAGGCTGATGGACACAAATACCAAAGGCAACA...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTCAAGGGAGCAAAGTTTaGACAGGTCACCAGATAGTG +
Preference number: 5 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISQGSKV*TGHQIV
Trigger: CACTATCTGGTGACCTGTCAAAACTTTGCTCCCTTG...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCCAGAGATGTGCAGATaGGTTCACGGGAAACAAGCC +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAAPEMCR*VHGKQA
Trigger: GGCTTGTTTCCCGTGAACCAATCTGCACATCTCTGG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CAA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGGGCATTTGGAAAGCTTaGTCAAGAAGAGGGATTTGG +
Preference number: 5 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLGIWKA*SRRGIW
Trigger: CCAAATCCCTCTTCTTGACAAAGCTTTCCAAATGCC...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS TCA 90 bp CCAAGAGCTACCACAATTTGCTCAATGAGAAGAATGATCGTGCTCTaGATTGAGGTGTTCATGACCCAGAATTCTCTCATGAGGGTGACT +
Preference number: 5 (lower is better)
Translates to: PRATTICSMRRMIVL*IEVFMTQNSLMRVT
Trigger: AGTCACCCTCATGAGAGAATTCTGGGTCATGAACACCTCAATTCAGAGCACGATCATTCTTCTCATTGAGCAAATTGTGGTAGCTCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCAAATGTGATGGTTCAGTaGGTCATAGAAGCGAGTAGA +
Preference number: 5 (lower is better)
Translates to: KQSILTTENIPEPCCRRPNVMVQ*VIEASR
Trigger: TCTACTCGCTTCTATGACCAACTGAACCATCACATT...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTGGATCAGCGAGTTCTaGCTATTCCTGCATTTCAGC +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHWISEF*LFLHFS
Trigger: GCTGAAATGCAGGAATAGCAAGAACTCGCTGATCCA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCAGCAGGTCCCTGGCCTaGTCAATGCACTGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCSRSLA*SMHCCA
Trigger: GGCACAACAGTGCATTGACAAGGCCAGGGACCTGCT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCACAGGCTTGCATACTaGAGCCAGGTTCTCATGTCT +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAAHRLAY*SQVLMS
Trigger: AGACATGAGAACCTGGCTCAAGTATGCAAGCCTGTG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTCTTCTCATCGCGGGCTaGGTTCTGATGTTTGTAGTG +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAALLIAG*VLMFVV
Trigger: CACTACAAACATCAGAACCAAGCCCGCGATGAGAAG...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTACATCAGGAGGGTTTaGGACAGATCCTCAGTGACC +
Preference number: 5 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCYIRRV*DRSSVT
Trigger: GGTCACTGAGGATCTGTCCAAAACCCTCCTGATGTA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATGCGATGCTCGATGTaGAGAAGGATCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSMRCSM*RRIFFF
Trigger: GAAGAAGAAGATCCTTCTCAACATCGAGCATCGCAT...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTCCCCAGCTGTATTATaGACGGCATGCTCAAACACC +
Preference number: 5 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCSPAVL*TACSNT
Trigger: GGTGTTTGAGCATGCCGTCAATAATACAGCTGGGGA...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTTCGGGATCGCTTGTaGCCTTTGGTATTTGTGTCC +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAAVRDRL*PLVFVS
Trigger: GGACACAAATACCAAAGGCAACAAGCGATCCCGAAC...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTGATGAGCAGCTCAACTaGCGTTGGAACATCCAAAGT +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSDEQLN*RWNIQS
Trigger: ACTTTGGATGTTCCAACGCAAGTTGAGCTGCTCATC...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp TCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTGGAAGACAGACCTTTaGTACTCATTTTGGCCTATC +
Preference number: 5 (lower is better)
Translates to: SNMYQTFPVFSTSMTVFLWKTDL*YSFWPI
Trigger: GATAGGCCAAAATGAGTACAAAAGGTCTGTCTTCCA...CAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACGTTGTCAAAGAAGGGTaGCACTTGCTGGAAGAAGAA +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHVVKEG*HLLEEE
Trigger: TTCTTCTTCCAGCAAGTGCAACCCTTCTTTGACAAC...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTGGCATCCACCTGCATaGCCTTCTGCCTCTTATGGG +
Preference number: 5 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFWHPPA*PSASYG
Trigger: CCCATAAGAGGCAGAAGGCAATGCAGGTGGATGCCA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTGATGAGCTCATCCTGTaGATCTTCATTCAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSDELIL*IFIQFR
Trigger: TCTGAACTGAATGAAGATCAACAGGATGAGCTCATC...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTTCTGGGTCGTCCTTGTaGGTGTCCATTTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAASGSSL*VSIFLS
Trigger: TGACAAGAAAATGGACACCAACAAGGACGACCCAGA...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTGGAAGGCATCGATCTaGCGGGCACTCTTCCACATG +
Preference number: 5 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFWKASI*RALFHM
Trigger: CATGTGGAAGAGTGCCCGCAAGATCGATGCCTTCCA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACGGCACATCAGAAGTTTaGGGGAAACATATTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHGTSEV*GKHIAA
Trigger: AGCTGCAATATGTTTCCCCAAAACTTCTGATGTGCC...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GAAGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTTTCATGGGATGTCGCTaGTTTGATGAGCAGCTCAAC +
Preference number: 5 (lower is better)
Translates to: EDRPFVLILAYLANISAAFMGCR*FDEQLN
Trigger: GTTGAGCTGCTCATCAAACAAGCGACATCCCATGAA...AGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CATAATTTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTTGGAAGACAGACCTTTaGTACTCATTTTGGCCTATC +
Preference number: 5 (lower is better)
Translates to: HNFQYVPDLPCVQHLHDSWKTDL*YSFWPI
Trigger: GATAGGCCAAAATGAGTACAAAAGGTCTGTCTTCCA...ACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCAGCGGTGGGGACTACTaGGCAAGGGGGAAGAATAAG +
Preference number: 5 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCSGGDY*ARGKNK
Trigger: CTTATTCTTCCCCCTTGCCAAGTAGTCCCCACCGCT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CAA 90 bp AAACAGAGTATTTTGACCACTGAAAACATCCCAGAACCCTGCTGCAGAAGGCCACATGATCCACTCACTTaGTGGAGCACTAACTATATA +
Preference number: 5 (lower is better)
Translates to: KQSILTTENIPEPCCRRPHDPLT*WSTNYI
Trigger: TATATAGTTAGTGCTCCACAAAGTGAGTGGATCATG...TGGCCTTCTGCAGCAGGGTTCTGGGATGTTTTCAGTGGTCAAAATACTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS TCA 90 bp AGCTACCACAATTTGCTCAATGAGAAGAATGATCGTGCTCTGAATTaGGGTGTTCATGACCCAGAATTCTCTCATGAGGGTGACTATTTC +
Preference number: 5 (lower is better)
Translates to: SYHNLLNEKNDRALN*GVHDPEFSHEGDYF
Trigger: GAAATAGTCACCCTCATGAGAGAATTCTGGGTCATGAACACCTCAATTCAGAGCACGATCATTCTTCTCATTGAGCAAATTGTGGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp TTCCAATATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTATTAAGGATTGTCATTaGGATCAGCGAGTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: FQYVPDLPCVQHLHDSISIKDCH*DQRVLA
Trigger: AGCAAGAACTCGCTGATCCAAATGACAATCCTTAAT...AGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACATATTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCCCAACTACGAGCAGTTaGCTAAGCACATCTGCCACC +
Preference number: 5 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFPTTSS*LSTSAT
Trigger: GGTGGCAGATGTGCTTAGCAAACTGCTCGTAGTTGG...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCGTATCCTGGAGGTTGTaGCCTCGTGACAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFVSWRL*PRDKEM
Trigger: CATCTCCTTGTCACGAGGCAACAACCTCCAGGATAC...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCTTCCGGGGCCTCTGCTaGGATGTGATGACTTGCAAA +
Preference number: 5 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCFRGLC*DVMTCK
Trigger: TTTGCAAGTCATCACATCCAAGCAGAGGCCCCGGAA...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTACAAACTCATGTCCGTaGCTGCCCATAAGTGTCAAT +
Preference number: 5 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCTNSCP*LPISVN
Trigger: ATTGACACTTATGGGCAGCAACGGACATGAGTTTGT...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTTCATTTTGGCCTATCTaGCAAACATTTCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSSFWPI*QTFLLL
Trigger: CAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGA...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp AGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCCACTCATTTTGGCCTATCTaGCAAACATTTCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RPFVLILAYLANISAAVHSFWPI*QTFLLL
Trigger: CAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGA...GTGGACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 90 bp TTCACAAAGTATTGGCAAGCCAAGGAAATACTGGAAAGATGTCAATaGCATCTGCCACACCAAGTAGTTACCAGAAAGCCTCTCAAAAAG +
Preference number: 5 (lower is better)
Translates to: FTKYWQAKEILERCQ*HLPHQVVTRKPLKK
Trigger: CTTTTTGAGAGGCTTTCTGGTAACTACTTGGTGTGGCAGATGTCATTGACATCTTTCCAGTATTTCCTTGGCTTGCCAATACTTTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS-3UTR CAA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCAGGAACTGCACACATTaGAGTCCCAGGGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCRNCTH*SPRDLK
Trigger: CTTCAAGTCCCTGGGACTCAAATGTGTGCAGTTCCT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AGACAGACCTTTTGTACTCATTTTGGCCTATCTTGCAAACATTTCTGCTGCTGTCATTGGAATGAAAATTaGGTACTTCTTCCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RQTFCTHFGLSCKHFCCCHWNEN*VLLPQL
Trigger: CAGCTGGGGAAGAAGTACCAAATTTTCATTCCAATG...ACAGCAGCAGAAATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGGTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCAGCTCTGGGTCGTCCTaGTTGGTGTCCATTTTCTTG +
Preference number: 5 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCSSGSS*LVSIFL
Trigger: CAAGAAAATGGACACCAACAAGGACGACCCAGAGCT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCGCTTGGGTGAGGTCCTaGACATTCCCTGATTTCATG +
Preference number: 5 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCAWVRS*TFPDFM
Trigger: CATGAAATCAGGGAATGTCAAGGACCTCACCCAAGC...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTTTTCCGAAGAGATGTaGGGTCATTGGCCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFFSEEM*GHWPEG
Trigger: CCCTTCTGGCCAATGACCCAACATCTCTTCGGAAAA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCTGGGATGTCGCTTGTTaGATGAGCAGCTCAACTTGC +
Preference number: 5 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFWDVAC*MSSSTC
Trigger: GCAAGTTGAGCTGCTCATCAAACAAGCGACATCCCA...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp ATGTACCAGACCTTCCCTGTGTTCAGCACCTCCATGACAGTATTTCTGTTTTCTCCTTTTGTACTCATTTaGGCCTATCTTGCAAACATT +
Preference number: 5 (lower is better)
Translates to: MYQTFPVFSTSMTVFLFSPFVLI*AYLANI
Trigger: AATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGG...AGAAAACAGAAATACTGTCATGGAGGTGCTGAACACAGGGAAGGTCTGGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCGCAAGTGTGTATCCCTaGACAATTCTGCAGATGAGC +
Preference number: 5 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFASVYP*TILQMS
Trigger: GCTCATCTGCAGAATTGTCAAGGGATACACACTTGC...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCGCAGCTCAACTTGCGTaGGAACATCCAAAGTGTCAT +
Preference number: 5 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCAAQLA*EHPKCH
Trigger: ATGACACTTTGGATGTTCCAACGCAAGTTGAGCTGC...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp CGTGGTATTACTATGTTTCACTGTCCTGGGAACCAAATCAAGCCTTGTGTTTCTCCTTTTGTACTCATTTaGGCCTATCTTGCAAACATT +
Preference number: 5 (lower is better)
Translates to: RGITMFHCPGNQIKPCVSPFVLI*AYLANI
Trigger: AATGTTTGCAAGATAGGCCAAAATGAGTACAAAAGG...AGAAACACAAGGCTTGATTTGGTTCCCAGGACAGTGAAACATAGTAATACCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS-3UTR CAA 90 bp GTGTCTAGACATGGCTACACTTTATACTTTGTGCATTTAGTTGAGTATTTGTTCACGGCCACAAAAATGTaGTCAAAGAAGGGTTGCACT +
Preference number: 5 (lower is better)
Translates to: VSRHGYTLYFVHLVEYLFTATKM*SKKGCT
Trigger: AGTGCAACCCTTCTTTGACAACATTTTTGTGGCCGT...GAACAAATACTCAACTAAATGCACAAAGTATAAAGTGTAGCCATGTCTAGACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS-3UTR CAA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCAGCAAGGACAGGCATTaGGAAAGCTTTGTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCSKDRH*ESFVKK
Trigger: CTTCTTGACAAAGCTTTCCAAATGCCTGTCCTTGCT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS-3UTR CAA 90 bp AATTATTCTGATACAACATGGTGTCTAGACATGGCTACACTTTATACTTTGTGCAAGAGCTACCACAATTaGCTCAATGAGAAGAATGAT +
Preference number: 5 (lower is better)
Translates to: NYSDTTWCLDMATLYTLCKSYHN*LNEKND
Trigger: ATCATTCTTCTCATTGAGCAAATTGTGGTAGCTCTT...GCACAAAGTATAAAGTGTAGCCATGTCTAGACACCATGTTGTATCAGAATAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp CCGCCGCCAGCACCGGTACCGCCGCTTCAGGCCCCCTaGCCCACCGCCCGCCTTCCCCGCTGTCCTCTAAGC +
Preference number: 6 (lower is better)
Translates to: PPPAPVPPLQAP*PTARLPRCPLS
Trigger: GCTTAGAGGACAGCGGGGAAGGCGGGCGGTGGGGCAGGGGGCCTGAAGCGGCGGTACCGGTGCTGGCGGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp CGGTGGTGGCGGCGGCAGGTCCGGTTCCAAGCATCTTaGCCTGAGGTTCGCGCGGCTTCGGCCAAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: RWWRRQVRFQAS*PEVRAASAKAS
Trigger: TGAGGCCTTGGCCGAAGCCGCGCGAACCTCAGGGCAAGATGCTTGGAACCGGACCTGCCGCCGCCACCACCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp GGCTGTTCTCGGTGCTCTCGGCCTCGCTCTCACTGTTaGTGCCCTCGGTGCTGGCAGTGGTGGTGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: GCSRCSRPRSHC*CPRCWQWWWQW
Trigger: CCACTGCCACCACCACTGCCAGCACCGAGGGCAGCAACAGTGAGAGCGAGGCCGAGAGCACCGAGAACAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 72 bp GGGCTGTTCTCGGTGCTCTCGGCCTCGCTCTCACTGTaGCTGCCCTCGGTGCTGGCAGTGGTGGTGGCAGTG +
Preference number: 6 (lower is better)
Translates to: GLFSVLSASLSL*LPSVLAVVVAV
Trigger: CACTGCCACCACCACTGCCAGCACCGAGGGCAGCAACAGTGAGAGCGAGGCCGAGAGCACCGAGAACAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 72 bp GGACAGATCCTCAGTGACCTTCTTCTGCAGCGGCGATaGGGTGGGGCTGTTCTCGGTGCTCTCGGCCTCGCT +
Preference number: 6 (lower is better)
Translates to: GQILSDLLLQRR*GGAVLGALGLA
Trigger: AGCGAGGCCGAGAGCACCGAGAACAGCCCCACCCCATCGCCGCTGCAGAAGAAGGTCACTGAGGATCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 72 bp CGGAGAACCAGGACAGCTGCATGTCTCCGGCCCTCATaGCGGTCAGCACCCAGCCATTCCAGGGCTCGCTTC +
Preference number: 6 (lower is better)
Translates to: RRTRTAACLRPS*RSAPSHSRARF
Trigger: GAAGCGAGCCCTGGAATGGCTGGGTGCTGACCGCAATGAGGGCCGGAGACATGCAGCTGTCCTGGTTCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp GTGCTGGGTCTCACAGGTGGCCTGCTTCTGATCACCTaGTACCAGCTGCGGTCGTGCTCTGTGGCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: VLGLTGGLLLIT*YQLRSCSVAAL
Trigger: CAGCGCCGCCACAGAGCACGACCGCAGCTGGTACAAGGTGATCAGAAGCAGGCCACCTGTGAGACCCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS CAA 90 bp AGGGCAGGGCTTAGTCCCACTGCCAGCATGGGCTCCAGCAGCTCCTaGATATCCTGCTGGATGCCTGGCCCCATTGCTCGAGCCAGCATG +
Preference number: 6 (lower is better)
Translates to: RAGLSPTASMGSSSS*ISCWMPGPIARASM
Trigger: CATGCTGGCTCGAGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCTGCTGGAGCCCATGCTGGCAGTGGGACTAAGCCCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp CAGCCAGGGTGCTGGGTCTCACAGGTGGCCTGCTTCTaGTCACCTTGTACCAGCTGCGGTCGTGCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: QPGCWVSQVACF*SPCTSCGRALW
Trigger: CCACAGAGCACGACCGCAGCTGGTACAAGGTGATCAGAAGCAGGCCACCTGTGAGACCCAGCACCCTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS CCA 72 bp GCCAGCATGGGCTCCAGCAGCTCCTTGATATCCTGCTaGATGCCTGGCCCCATTGCTCGAGCCAGCATGCTG +
Preference number: 6 (lower is better)
Translates to: ASMGSSSSLISC*MPGPIARASML
Trigger: CAGCATGCTGGCTCGAGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCTGCTGGAGCCCATGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp GGCTCAGCCGTCTCAGCCATTCCAGCCAGTCATCTTTaGAGACCCTCCTGGCAGCGCCCCAGGCCTTTTGGA +
Preference number: 6 (lower is better)
Translates to: GSAVSAIPASHL*RPSWQRPRPFG
Trigger: TCCAAAAGGCCTGGGGCGCTGCCAGGAGGGTCTCCAAAGATGACTGGCTGGAATGGCTGAGACGGCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 90 bp GCCAGCTCACGGAGAACCAGGACAGCTGCATGTCTCCGGCCCTCATaGCGGTCAGCACCCAGCCATTCCAGGGCTCGCTTCACCTCAAAT +
Preference number: 6 (lower is better)
Translates to: ASSRRTRTAACLRPS*RSAPSHSRARFTSN
Trigger: ATTTGAGGTGAAGCGAGCCCTGGAATGGCTGGGTGCTGACCGCAATGAGGGCCGGAGACATGCAGCTGTCCTGGTTCTCCGTGAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp ACTGCCAGCATGGGCTCCAGCAGCTCCTTGATATCCTaGTGGATGCCTGGCCCCATTGCTCGAGCCAGCATG +
Preference number: 6 (lower is better)
Translates to: TASMGSSSSLIS*WMPGPIARASM
Trigger: CATGCTGGCTCGAGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCTGCTGGAGCCCATGCTGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp GACAGGCACGAAGGGCGGCTACAGCTCCCTCACGGATaGCCTGTTTGGGGTCCCACACGGCCACAAAAATGT +
Preference number: 6 (lower is better)
Translates to: DRHEGRLQLPHG*PVWGPTRPQKC
Trigger: ACATTTTTGTGGCCGTGTGGGACCCCAAACAGGCCATCCGTGAGGGAGCTGTAGCCGCCCTTCGTGCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp TCTGCAACACCGGCTCTCCACCAGGGTGGACTTAGCTaGACTGGGGGAGGTCCCAAATCCCATGAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: SATPALHQGGLS*TGGGPKSHEAL
Trigger: CAAGGCCTCATGGGATTTGGGACCTCCCCCAGTCCAGCTAAGTCCACCCTGGTGGAGAGCCGGTGTTGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp CATGCCAGGCCTTGTACCAGCTGCGGTCGTGCTCTGTaGCGGCGCTGTAGTACTGCAGCACTTTGGGGATTG +
Preference number: 6 (lower is better)
Translates to: HARPCTSCGRAL*RRCSTAALWGL
Trigger: CAATCCCCAAAGTGCTGCAGTACTACAGCGCCGCCACAGAGCACGACCGCAGCTGGTACAAGGCCTGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp GAGGCTTCTGCATCTCCTTCGGCTCACGCTGGGTTGTaGGAATCAGACAGGCACGAAGGGCGGCTACAGCTC +
Preference number: 6 (lower is better)
Translates to: EASASPSAHAGL*ESDRHEGRLQL
Trigger: GAGCTGTAGCCGCCCTTCGTGCCTGTCTGATTCTCACAACCCAGCGTGAGCCGAAGGAGATGCAGAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp TTAGTCCCACTGCCAGCATGGGCTCCAGCAGCTCCTTaGTATCCTGCTGGATGCCTGGCCCCATTGCTCGAG +
Preference number: 6 (lower is better)
Translates to: LVPLPAWAPAAP*YPAGCLAPLLE
Trigger: CTCGAGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCTGCTGGAGCCCATGCTGGCAGTGGGACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp CAAATTCAAAGCTGCCAAGCGTTCGGAGGGCAAGAGTaGTGCTGCCCACATCGCTGGCCTCAGGGAGGGTCG +
Preference number: 6 (lower is better)
Translates to: QIQSCQAFGGQE*CCPHRWPQGGS
Trigger: CGACCCTCCCTGAGGCCAGCGATGTGGGCAGCATCACTCTTGCCCTCCGAACGCTTGGCAGCTTTGAATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp GGCAGCCCTGCAGTCTCTCCCACCAGATCTGGCGGATaGTCTCTCGTCGCTCGGGGACAAGTTTGTACTGGA +
Preference number: 6 (lower is better)
Translates to: GSPAVSPTRSGG*SLVARGQVCTG
Trigger: TCCAGTACAAACTTGTCCCCGAGCGACGAGAGATCATCCGCCAGATCTGGTGGGAGAGACTGCAGGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS TCA 72 bp CCAACAGCAGGGCTCAGAGGAGCGCAAGGTCGATGCTaGGGAACAGCTGCTCCTGCCTGTTCTGTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: PTAGLRGAQGRC*GTAAPACSVCP
Trigger: TGGACACACAGAACAGGCAGGAGCAGCTGTTCCTCAGCATCGACCTTGCGCTCCTCTGAGCCCTGCTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS GCA 72 bp AAACAAGGCCTGCAAGTTCTCCGCCTGGGCCAGGTGTaGATCAAAGCGCTCGTCCAGGGACGCCAAGACACA +
Preference number: 6 (lower is better)
Translates to: KQGLQVLRLGQV*IKALVQGRQDT
Trigger: TGTGTCTTGGCGTCCCTGGACGAGCGCTTTGATGCACACCTGGCCCAGGCGGAGAACTTGCAGGCCTTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp CGAGATGCCTCTTCCAGGCCTTCATGCCACATCTCATaGCAGAGGATGGCCACTCGGATCAGCTCCTCGCTC +
Preference number: 6 (lower is better)
Translates to: RDASSRPSCHIS*QRMATRISSSL
Trigger: GAGCGAGGAGCTGATCCGAGTGGCCATCCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGAGGCATCTCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 72 bp GGGCTCCAGCAGCTCCTTGATATCCTGCTGGATGCCTaGCCCCATTGCTCGAGCCAGCATGCTGATGCAAGT +
Preference number: 6 (lower is better)
Translates to: GLQQLLDILLDA*PHCSSQHADAS
Trigger: ACTTGCATCAGCATGCTGGCTCGAGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCTGCTGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp ATACGCTGGCAGCCCTGCAGTCTCTCCCACCAGATCTaGCGGATGATCTCTCGTCGCTCGGGGACAAGTTTG +
Preference number: 6 (lower is better)
Translates to: IRWQPCSLSHQI*RMISRRSGTSL
Trigger: CAAACTTGTCCCCGAGCGACGAGAGATCATCCGCCAGATCTGGTGGGAGAGACTGCAGGGCTGCCAGCGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CCA 72 bp CGGGCCATGAGCTTGTGCAGTTCCTGCTTATGCTGCTaGTCCTCAGTAGCGATGGCATGCTGGGCCTGTTGC +
Preference number: 6 (lower is better)
Translates to: RAMSLCSSCLCC*SSVAMACWACC
Trigger: GCAACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAAGCAGGAACTGCACAAGCTCATGGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CCA 72 bp CCGGGCTGTCGTGGTAGACTTAGAAGCCACTGTCAGTaGGTAGATGAGGGCCTGGGGGTGGTACCGACCAAT +
Preference number: 6 (lower is better)
Translates to: PGCRGRLRSHCQ*VDEGLGVVPTN
Trigger: ATTGGTCGGTACCACCCCCAGGCCCTCATCTACCCACTGACAGTGGCTTCTAAGTCTACCACGACAGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 72 bp GCCAGGCCCTTGGGCATGCCTGGGTGGCGAAGGGGTTaGTGCATAAGGACCAGGGACAGCATTTTCAGTAGC +
Preference number: 6 (lower is better)
Translates to: ARPLGMPGWRRG*CIRTRDSIFSS
Trigger: GCTACTGAAAATGCTGTCCCTGGTCCTTATGCACAAACCCCTTCGCCACCCAGGCATGCCCAAGGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 90 bp AGACAGGCACGAAGGGCGGCTACAGCTCCCTCACGGATGGCCTGTTaGGGGTCCCACACGGCCACAAAAATGTTGTCAAAGAAGGGTTGC +
Preference number: 6 (lower is better)
Translates to: RQARRAATAPSRMAC*GSHTATKMLSKKGC
Trigger: GCAACCCTTCTTTGACAACATTTTTGTGGCCGTGTGGGACCCCAAACAGGCCATCCGTGAGGGAGCTGTAGCCGCCCTTCGTGCCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp TCTGCCACCACTTGCACTGCGGTCTGGCTAACCACATaGGCATGGCCACTGATGAGGTGGATGGAGGGTGTG +
Preference number: 6 (lower is better)
Translates to: SATTCTAVWLTT*AWPLMRWMEGV
Trigger: CACACCCTCCATCCACCTCATCAGTGGCCATGCTCATGTGGTTAGCCAGACCGCAGTGCAAGTGGTGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp GGGCTGACCACAAGGGACCGCACCATAAGGATTTTCTaGCAGTCCTCTACGATACGCTGGCAGCCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: GLTTRDRTIRIF*QSSTIRWQPCS
Trigger: ACTGCAGGGCTGCCAGCGTATCGTAGAGGACTGGCAGAAAATCCTTATGGTGCGGTCCCTTGTGGTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 72 bp CATCGGGCCATGAGCTTGTGCAGTTCCTGCTTATGCTaGTGGTCCTCAGTAGCGATGGCATGCTGGGCCTGT +
Preference number: 6 (lower is better)
Translates to: HRAMSLCSSCLC*WSSVAMACWAC
Trigger: ACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAAGCAGGAACTGCACAAGCTCATGGCCCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 72 bp AAGCATCGGGCCATGAGCTTGTGCAGTTCCTGCTTATaGTGCTGGTCCTCAGTAGCGATGGCATGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: KHRAMSLCSSCL*CWSSVAMACWA
Trigger: GGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAAGCAGGAACTGCACAAGCTCATGGCCCGATGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CCA 72 bp GGCCTCGAGGCAGCGCATGCGGCCCAGCATCAGCTCTaGGTCGTCCTTGTTGGTGTCCATTTTCTTGTCATA +
Preference number: 6 (lower is better)
Translates to: GLEAAHAAQHQL*VVLVGVHFLVI
Trigger: TATGACAAGAAAATGGACACCAACAAGGACGACCCAGAGCTGATGCTGGGCCGCATGCGCTGCCTCGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp CGAAGGGCGGCTACAGCTCCCTCACGGATGGCCTGTTaGGGGTCCCACACGGCCACAAAAATGTTGTCAAAG +
Preference number: 6 (lower is better)
Translates to: RRAATAPSRMAC*GSHTATKMLSK
Trigger: CTTTGACAACATTTTTGTGGCCGTGTGGGACCCCAAACAGGCCATCCGTGAGGGAGCTGTAGCCGCCCTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp TGGGGGTGGTACCGACCAATGTCTGTGAGAAGCTGGTaGATGAGACGTCCCACCAAGGGTCTGGGCGTATCA +
Preference number: 6 (lower is better)
Translates to: WGWYRPMSVRSW*MRRPTKGLGVS
Trigger: TGATACGCCCAGACCCTTGGTGGGACGTCTCATTCACCAGCTTCTCACAGACATTGGTCGGTACCACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 72 bp ATCTCCCGGCCTCCTAGGGGAGCTCACGCACAAACCTaGAGACCTAGGTACTCTGCAAGGCACAATGGGAGT +
Preference number: 6 (lower is better)
Translates to: ISRPPRGAHAQT*RPRYSARHNGS
Trigger: ACTCCCATTGTGCCTTGCAGAGTACCTAGGTCTTCAGGTTTGTGCGTGAGCTCCCCTAGGAGGCCGGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS GCA 72 bp TCCTCATTCCGGCTCTTTAGGCCACTGGCAAACTGCTaGAGGACGCTCACATTGCTAGATGTGGTGGCAGCG +
Preference number: 6 (lower is better)
Translates to: SSFRLFRPLANC*RTLTLLDVVAA
Trigger: CGCTGCCACCACATCTAGCAATGTGAGCGTCCTGCAGCAGTTTGCCAGTGGCCTAAAGAGCCGGAATGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp GCATTGGAGACCAGGTGCCCCAGCATGCGGGCACTCTaGTCTTTGATTCTTCCAATCCCACTGTGCTCCAAC +
Preference number: 6 (lower is better)
Translates to: ALETRCPSMRAL*SLILPIPLCSN
Trigger: GTTGGAGCACAGTGGGATTGGAAGAATCAAAGAGCAGAGTGCCCGCATGCTGGGGCACCTGGTCTCCAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp TGCTGGGCCTGTTGCTGCATGGTCTGGACAAAATGCTaGATGTGCTGGAAGGCATCGATCTTGCGGGCACTC +
Preference number: 6 (lower is better)
Translates to: CWACCCMVWTKC*MCWKASILRAL
Trigger: GAGTGCCCGCAAGATCGATGCCTTCCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 72 bp GCATGCTGGGCCTGTTGCTGCATGGTCTGGACAAAATaGTGCATGTGCTGGAAGGCATCGATCTTGCGGGCA +
Preference number: 6 (lower is better)
Translates to: ACWACCCMVWTK*CMCWKASILRA
Trigger: TGCCCGCAAGATCGATGCCTTCCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 72 bp TGCTGGTCCTCAGTAGCGATGGCATGCTGGGCCTGTTaGTGCATGGTCTGGACAAAATGCTGCATGTGCTGG +
Preference number: 6 (lower is better)
Translates to: CWSSVAMACWAC*CMVWTKCCMCW
Trigger: CCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 72 bp TCCTTCAGAGTCTGGGGGCCCCGTTCCATCATAGCATaGAAGGGCTCCAGCACCTCAAACATGCCTTTCACG +
Preference number: 6 (lower is better)
Translates to: SFRVWGPRSIIA*KGSSTSNMPFT
Trigger: CGTGAAAGGCATGTTTGAGGTGCTGGAGCCCTTGCATGCTATGATGGAACGGGGCCCCCAGACTCTGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 72 bp AAACAAGCCCATGAATGTGACCGTGCAGGGGATACATaGAGGCGAGGAGTGAGAGCGAGGCCAGCAAAGCAC +
Preference number: 6 (lower is better)
Translates to: KQAHECDRAGDT*RRGVRARPAKH
Trigger: GTGCTTTGCTGGCCTCGCTCTCACTCCTCGCCTGCATGTATCCCCTGCACGGTCACATTCATGGGCTTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS GCA 72 bp TGTAGCACAGCTTCGAAGTTCATCACTGCCCACGCATaGCAGGCCTGGTTGGGGAGAAAGGCAAGGACAGAC +
Preference number: 6 (lower is better)
Translates to: CSTASKFITAHA*QAWLGRKARTD
Trigger: GTCTGTCCTTGCCTTTCTCCCCAACCAGGCCTGGCATGCGTGGGCAGTGATGAACTTCGAAGCTGTGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS CCA 72 bp GAAGGGCGGCTACAGCTCCCTCACGGATGGCCTGTTTaGGGTCCCACACGGCCACAAAAATGTTGTCAAAGA +
Preference number: 6 (lower is better)
Translates to: EGRLQLPHGWPV*GPTRPQKCCQR
Trigger: TCTTTGACAACATTTTTGTGGCCGTGTGGGACCCCAAACAGGCCATCCGTGAGGGAGCTGTAGCCGCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp TCCCCAGCTGAAAAACAAGTGAAGACAGCGTGTCCATaGCTGTGGAGCGCAGTTCTGGGCTCTGGTCCAGTG +
Preference number: 6 (lower is better)
Translates to: SPAEKQVKTACP*LWSAVLGSGPV
Trigger: CACTGGACCAGAGCCCAGAACTGCGCTCCACAGCCATGGACACGCTGTCTTCACTTGTTTTTCAGCTGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp GAGACCAGGTGCCCCAGCATGCGGGCACTCTGCTCTTaGATTCTTCCAATCCCACTGTGCTCCAACTCTGTC +
Preference number: 6 (lower is better)
Translates to: ETRCPSMRALCS*ILPIPLCSNSV
Trigger: GACAGAGTTGGAGCACAGTGGGATTGGAAGAATCAAAGAGCAGAGTGCCCGCATGCTGGGGCACCTGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp CTGCTGGTCCTCAGTAGCGATGGCATGCTGGGCCTGTaGCTGCATGGTCTGGACAAAATGCTGCATGTGCTG +
Preference number: 6 (lower is better)
Translates to: LLVLSSDGMLGL*LHGLDKMLHVL
Trigger: CAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CAA 90 bp TCCCACCAGATCTGGCGGATGATCTCTCGTCGCTCGGGGACAAGTTaGTACTGGATAACCTCCTCCAGCTCGGACAGCATGTGGCAAGAA +
Preference number: 6 (lower is better)
Translates to: SHQIWRMISRRSGTS*YWITSSSSDSMWQE
Trigger: TTCTTGCCACATGCTGTCCGAGCTGGAGGAGGTTATCCAGTACAAACTTGTCCCCGAGCGACGAGAGATCATCCGCCAGATCTGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CAA 90 bp CTGCTTATGCTGCTGGTCCTCAGTAGCGATGGCATGCTGGGCCTGTaGCTGCATGGTCTGGACAAAATGCTGCATGTGCTGGAAGGCATC +
Preference number: 6 (lower is better)
Translates to: LLMLLVLSSDGMLGL*LHGLDKMLHVLEGI
Trigger: GATGCCTTCCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CAA 90 bp GCGTGCAGTGTGTCACAGTGGGGAACCCAGCCAATGAGGCCCGAGTaGGTCGATAAAGGGATGACAGCGTATCTCTGGATGCTGAGGTTT +
Preference number: 6 (lower is better)
Translates to: ACSVSQWGTQPMRPE*VDKGMTAYLWMLRF
Trigger: AAACCTCAGCATCCAGAGATACGCTGTCATCCCTTTATCGACCAACTCGGGCCTCATTGGCTGGGTTCCCCACTGTGACACACTGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 72 bp TGGCAAGACGGCCAATGGCCTTGGATGCCATTTCCATaGCAACTGGGTCATTGGAGGGGAGGAGGTTCCGAA +
Preference number: 6 (lower is better)
Translates to: WQDGQWPWMPFP*QLGHWRGGGSE
Trigger: TTCGGAACCTCCTCCCCTCCAATGACCCAGTTGTCATGGAAATGGCATCCAAGGCCATTGGCCGTCTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp AGACCAGGTGCCCCAGCATGCGGGCACTCTGCTCTTTaGTTCTTCCAATCCCACTGTGCTCCAACTCTGTCA +
Preference number: 6 (lower is better)
Translates to: RPGAPACGHSAL*FFQSHCAPTLS
Trigger: TGACAGAGTTGGAGCACAGTGGGATTGGAAGAATCAAAGAGCAGAGTGCCCGCATGCTGGGGCACCTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp GAGAACTCTGAGTGTATCCTGGAGGTTGTTGCCTCGTaGCAAGGAGATGGAACGGAAGAAGCCCTGGACGGC +
Preference number: 6 (lower is better)
Translates to: ENSECILEVVAS*QGDGTEEALDG
Trigger: GCCGTCCAGGGCTTCTTCCGTTCCATCTCCTTGTCACGAGGCAACAACCTCCAGGATACACTCAGAGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 72 bp GCTGATGCAAGTGAAGACTGTGGCATCCACCTGCATTaGCTTCTGCCTCTTATGGGCGAAGTCCTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: ADASEDCGIHLH*LLPLMGEVLWG
Trigger: CCCCCAAAGGACTTCGCCCATAAGAGGCAGAAGGCAATGCAGGTGGATGCCACAGTCTTCACTTGCATCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp CAGCTCCTTGATATCCTGCTGGATGCCTGGCCCCATTaGTCGAGCCAGCATGCTGATGCAAGTGAAGACTGT +
Preference number: 6 (lower is better)
Translates to: QLLDILLDAWPH*SSQHADASEDC
Trigger: ACAGTCTTCACTTGCATCAGCATGCTGGCTCGAGCAATGGGGCCAGGCATCCAGCAGGATATCAAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp CTTCATGGGTCCTGTTTCCACTGGTCCACTAGCCAATaGATCCCCTTGGCCACTCCTAAGCATCCGATGCTG +
Preference number: 6 (lower is better)
Translates to: LHGSCFHWSTSQ*IPLATPKHPML
Trigger: CAGCATCGGATGCTTAGGAGTGGCCAAGGGGATGCATTGGCTAGTGGACCAGTGGAAACAGGACCCATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp GGGTGTCCCGAGGGATCATACAGGTGTATTCTTCCATaGTGTCCCACTGACCTAAACCCCATGCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GCPEGSYRCILP*CPTDLNPMQLQ
Trigger: CTGCAGCTGCATGGGGTTTAGGTCAGTGGGACAGCATGGAAGAATACACCTGTATGATCCCTCGGGACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp TGGTCCTCAGTAGCGATGGCATGCTGGGCCTGTTGCTaGATGGTCTGGACAAAATGCTGCATGTGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: WSSVAMACWACC*MVWTKCCMCWK
Trigger: CTTCCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 72 bp TCCTGCTTATGCTGCTGGTCCTCAGTAGCGATGGCATaGTGGGCCTGTTGCTGCATGGTCTGGACAAAATGC +
Preference number: 6 (lower is better)
Translates to: SCLCCWSSVAMA*WACCCMVWTKC
Trigger: GCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 72 bp TTCAGGAAGCATCGGGCCATGAGCTTGTGCAGTTCCTaGTTATGCTGCTGGTCCTCAGTAGCGATGGCATGC +
Preference number: 6 (lower is better)
Translates to: FRKHRAMSLCSS*LCCWSSVAMAC
Trigger: GCATGCCATCGCTACTGAGGACCAGCAGCATAAGCAGGAACTGCACAAGCTCATGGCCCGATGCTTCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 72 bp TCATTGGCCAGAAGGGTGTTAACCAGGCCGAAGAGCTaGATCACACGCTCATCCTGGCGCAGATCTTCATGG +
Preference number: 6 (lower is better)
Translates to: SLARRVLTRPKS*ITRSSWRRSSW
Trigger: CCATGAAGATCTGCGCCAGGATGAGCGTGTGATGCAGCTCTTCGGCCTGGTTAACACCCTTCTGGCCAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 72 bp TCAGACCTCACAGCCACAGAAAGTAGCCCCAGGGCTTaGAAGGCCGCTGTACGTTCCTTCTCCTTCTTGACA +
Preference number: 6 (lower is better)
Translates to: SDLTATESSPRA*KAAVRSFSFLT
Trigger: TGTCAAGAAGGAGAAGGAACGTACAGCGGCCTTCCAAGCCCTGGGGCTACTTTCTGTGGCTGTGAGGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp CAGACTCGAATGACGTTAAGGAACGTGGGCATGACCTaGGGCAGGAACTGCACACATTTGAGTCCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: QTRMTLRNVGMT*GRNCTHLSPRD
Trigger: GTCCCTGGGACTCAAATGTGTGCAGTTCCTGCCCCAGGTCATGCCCACGTTCCTTAACGTCATTCGAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp GCATGCGGCCCAGCATCAGCTCTGGGTCGTCCTTGTTaGTGTCCATTTTCTTGTCATAGGCCACAAGGGCAT +
Preference number: 6 (lower is better)
Translates to: ACGPASALGRPC*CPFSCHRPQGH
Trigger: ATGCCCTTGTGGCCTATGACAAGAAAATGGACACCAACAAGGACGACCCAGAGCTGATGCTGGGCCGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp CATGCAGCTGCAGCAGCCATCCGGGCCATCTTGGCTTaGGTCTCATCATTAACCAGGGTCCACTTTTCACAG +
Preference number: 6 (lower is better)
Translates to: HAAAAAIRAILA*VSSLTRVHFSQ
Trigger: CTGTGAAAAGTGGACCCTGGTTAATGATGAGACCCAAGCCAAGATGGCCCGGATGGCTGCTGCAGCTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp CGGATGATCTCTCGTCGCTCGGGGACAAGTTTGTACTaGATAACCTCCTCCAGCTCGGACAGCATGTGGCAA +
Preference number: 6 (lower is better)
Translates to: RMISRRSGTSLY*ITSSSSDSMWQ
Trigger: TTGCCACATGCTGTCCGAGCTGGAGGAGGTTATCCAGTACAAACTTGTCCCCGAGCGACGAGAGATCATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CCA 72 bp GTAGCGATGGCATGCTGGGCCTGTTGCTGCATGGTCTaGACAAAATGCTGCATGTGCTGGAAGGCATCGATC +
Preference number: 6 (lower is better)
Translates to: VAMACWACCCMV*TKCCMCWKASI
Trigger: GATCGATGCCTTCCAGCACATGCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CCA 72 bp TGCTTATGCTGCTGGTCCTCAGTAGCGATGGCATGCTaGGCCTGTTGCTGCATGGTCTGGACAAAATGCTGC +
Preference number: 6 (lower is better)
Translates to: CLCCWSSVAMAC*ACCCMVWTKCC
Trigger: GCAGCATTTTGTCCAGACCATGCAGCAACAGGCCCAGCATGCCATCGCTACTGAGGACCAGCAGCATAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CAA 72 bp AACGTGGGCATGACCTGGGGCAGGAACTGCACACATTaGAGTCCCAGGGACTTGAAGATGAAGGTGATGGCC +
Preference number: 6 (lower is better)
Translates to: NVGMTWGRNCTH*SPRDLKMKVMA
Trigger: GGCCATCACCTTCATCTTCAAGTCCCTGGGACTCAAATGTGTGCAGTTCCTGCCCCAGGTCATGCCCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp CCATGCAGCTGCAGCAGCCATCCGGGCCATCTTGGCTaGGGTCTCATCATTAACCAGGGTCCACTTTTCACA +
Preference number: 6 (lower is better)
Translates to: PCSCSSHPGHLG*GLIINQGPLFT
Trigger: TGTGAAAAGTGGACCCTGGTTAATGATGAGACCCAAGCCAAGATGGCCCGGATGGCTGCTGCAGCTGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp ATCTGGCGGATGATCTCTCGTCGCTCGGGGACAAGTTaGTACTGGATAACCTCCTCCAGCTCGGACAGCATG +
Preference number: 6 (lower is better)
Translates to: IWRMISRRSGTS*YWITSSSSDSM
Trigger: CATGCTGTCCGAGCTGGAGGAGGTTATCCAGTACAAACTTGTCCCCGAGCGACGAGAGATCATCCGCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS CAA 72 bp GTGTCACAGTGGGGAACCCAGCCAATGAGGCCCGAGTaGGTCGATAAAGGGATGACAGCGTATCTCTGGATG +
Preference number: 6 (lower is better)
Translates to: VSQWGTQPMRPE*VDKGMTAYLWM
Trigger: CATCCAGAGATACGCTGTCATCCCTTTATCGACCAACTCGGGCCTCATTGGCTGGGTTCCCCACTGTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 72 bp CACAGCAGCTTGGCCAGGTCGTCCCCAGCTGTATTATaGACGGCATGCTCAAACACCTCCACCTTCTGCATC +
Preference number: 6 (lower is better)
Translates to: HSSLARSSPAVL*TACSNTSTFCI
Trigger: GATGCAGAAGGTGGAGGTGTTTGAGCATGCCGTCAATAATACAGCTGGGGACGACCTGGCCAAGCTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 90 bp CCCTCACGGATGGCCTGTTTGGGGTCCCACACGGCCACAAAAATGTaGTCAAAGAAGGGTTGCACTTGCTGGAAGAAGAAGGTAGGGACG +
Preference number: 6 (lower is better)
Translates to: PSRMACLGSHTATKM*SKKGCTCWKKKVGT
Trigger: CGTCCCTACCTTCTTCTTCCAGCAAGTGCAACCCTTCTTTGACAACATTTTTGTGGCCGTGTGGGACCCCAAACAGGCCATCCGTGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 90 bp TGGATTGCAGCCAGTAACTTGATAGAGACAATGCGGCCTGGGCTGTaGTCATGCATGAAGACACGCAGCATGTGTGGGATCAGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: WIAASNLIETMRPGL*SCMKTRSMCGISWG
Trigger: GCCCCAGCTGATCCCACACATGCTGCGTGTCTTCATGCATGACAACAGCCCAGGCCGCATTGTCTCTATCAAGTTACTGGCTGCAATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 90 bp CGGATCAGCTCCTCGCTCACCATCATGGCCTGCTGGACCAGGGTGTaGCTGTGCTCACACATGTTCTTCAGAATCTTGTTGGCTGCATTG +
Preference number: 6 (lower is better)
Translates to: RISSSLTIMACWTRV*LCSHMFFRILLAAL
Trigger: CAATGCAGCCAACAAGATTCTGAAGAACATGTGTGAGCACAGCAACACCCTGGTCCAGCAGGCCATGATGGTGAGCGAGGAGCTGATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS TCA 72 bp CAGAGGAATCCTGACTTGACTTGGATTCTGACAGGCTaGCAGCAGAGGCATCCCGGGACTGGTCTATCATGC +
Preference number: 6 (lower is better)
Translates to: QRNPDLTWILTG*QQRHPGTGLSC
Trigger: GCATGATAGACCAGTCCCGGGATGCCTCTGCTGTCAGCCTGTCAGAATCCAAGTCAAGTCAGGATTCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp ACAGCAGCTTGGCCAGGTCGTCCCCAGCTGTATTATTaGCGGCATGCTCAAACACCTCCACCTTCTGCATCA +
Preference number: 6 (lower is better)
Translates to: TAAWPGRPQLYY*RHAQTPPPSAS
Trigger: TGATGCAGAAGGTGGAGGTGTTTGAGCATGCCGTCAATAATACAGCTGGGGACGACCTGGCCAAGCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 72 bp CTCAAATTCCACGTACTCAGCGGTAAAAGTGTCCCCTaGCATGGCAAGACGGCCAATGGCCTTGGATGCCAT +
Preference number: 6 (lower is better)
Translates to: LKFHVLSGKSVP*HGKTANGLGCH
Trigger: ATGGCATCCAAGGCCATTGGCCGTCTTGCCATGGCAGGGGACACTTTTACCGCTGAGTACGTGGAATTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp CCAAAGTACAAACGAGATGCCTCTTCCAGGCCTTCATaGCACATCTCATGCCAGAGGATGGCCACTCGGATC +
Preference number: 6 (lower is better)
Translates to: PKYKRDASSRPS*HISCQRMATRI
Trigger: GATCCGAGTGGCCATCCTCTGGCATGAGATGTGGCATGAAGGCCTGGAAGAGGCATCTCGTTTGTACTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 72 bp CACGAAAGCACCCGCAGGCTCCACGGCAGAGTCTCCTaGTCTCTGACTATTTCACGCAGGTTATGGTCAATT +
Preference number: 6 (lower is better)
Translates to: HESTRRLHGRVS*SLTISRRLWSI
Trigger: AATTGACCATAACCTGCGTGAAATAGTCAGAGAGCAGGAGACTCTGCCGTGGAGCCTGCGGGTGCTTTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490931.1
CDS CCA 72 bp CTGGGTCATTGGAGGGGAGGAGGTTCCGAAGATAGTTaGCAAATCTGCCAATTCGGGTGGCATTCCCACCTT +
Preference number: 6 (lower is better)
Translates to: LGHWRGGGSEDS*QICQFGWHSHL
Trigger: AAGGTGGGAATGCCACCCGAATTGGCAGATTTGCCAACTATCTTCGGAACCTCCTCCCCTCCAATGACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp TCGGAAGATCCGCATCAGGGCCACCATGGACACAGCTaGGTAGAACTCATCCAGAGGCAAGTTTCCCATGTT +
Preference number: 6 (lower is better)
Translates to: SEDPHQGHHGHS*VELIQRQVSHV
Trigger: AACATGGGAAACTTGCCTCTGGATGAGTTCTACCCAGCTGTGTCCATGGTGGCCCTGATGCGGATCTTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp GCTGAAAAACAAGTGAAGACAGCGTGTCCATGGCTGTaGAGCGCAGTTCTGGGCTCTGGTCCAGTGTTCGAA +
Preference number: 6 (lower is better)
Translates to: AEKQVKTACPWL*SAVLGSGPVFE
Trigger: TTCGAACACTGGACCAGAGCCCAGAACTGCGCTCCACAGCCATGGACACGCTGTCTTCACTTGTTTTTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp AAAGTGTCCCCTGCCATGGCAAGACGGCCAATGGCCTaGGATGCCATTTCCATGACAACTGGGTCATTGGAG +
Preference number: 6 (lower is better)
Translates to: KVSPAMARRPMA*DAISMTTGSLE
Trigger: CTCCAATGACCCAGTTGTCATGGAAATGGCATCCAAGGCCATTGGCCGTCTTGCCATGGCAGGGGACACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp TGGGGCAGGAACTGCACACATTTGAGTCCCAGGGACTaGAAGATGAAGGTGATGGCCTGGACAACCATGGTG +
Preference number: 6 (lower is better)
Translates to: WGRNCTHLSPRD*KMKVMAWTTMV
Trigger: CACCATGGTTGTCCAGGCCATCACCTTCATCTTCAAGTCCCTGGGACTCAAATGTGTGCAGTTCCTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 90 bp CTGTTTGGGGTCCCACACGGCCACAAAAATGTTGTCAAAGAAGGGTaGCACTTGCTGGAAGAAGAAGGTAGGGACGCTGATGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LFGVPHGHKNVVKEG*HLLEEEGRDADGQL
Trigger: GAGCTGGCCATCAGCGTCCCTACCTTCTTCTTCCAGCAAGTGCAACCCTTCTTTGACAACATTTTTGTGGCCGTGTGGGACCCCAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 90 bp GCGTATCTCTGGATGCTGAGGTTTTTCCGAAGAGATGTTGGGTCATaGGCCAGAAGGGTGTTAACCAGGCCGAAGAGCTGCATCACACGC +
Preference number: 6 (lower is better)
Translates to: AYLWMLRFFRRDVGS*ARRVLTRPKSCITR
Trigger: GCGTGTGATGCAGCTCTTCGGCCTGGTTAACACCCTTCTGGCCAATGACCCAACATCTCTTCGGAAAAACCTCAGCATCCAGAGATACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 90 bp CTTTTCAGCCACAGCAGCTTGGCCAGGTCGTCCCCAGCTGTATTATaGACGGCATGCTCAAACACCTCCACCTTCTGCATCAGAGTCAAG +
Preference number: 6 (lower is better)
Translates to: LFSHSSLARSSPAVL*TACSNTSTFCIRVK
Trigger: CTTGACTCTGATGCAGAAGGTGGAGGTGTTTGAGCATGCCGTCAATAATACAGCTGGGGACGACCTGGCCAAGCTGCTGTGGCTGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 90 bp GGGACTACTTGGCAAGGGGGAAGAATAAGGCCAGAGATGTGCAGATaGGTTCACGGGAAACAAGCCCATGAATGTGACCGTGCAGGGGAT +
Preference number: 6 (lower is better)
Translates to: GTTWQGGRIRPEMCR*VHGKQAHECDRAGD
Trigger: ATCCCCTGCACGGTCACATTCATGGGCTTGTTTCCCGTGAACCAATCTGCACATCTCTGGCCTTATTCTTCCCCCTTGCCAAGTAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS TCA 72 bp GCACCCGCAGGCTCCACGGCAGAGTCTCCTGCTCTCTaGCTATTTCACGCAGGTTATGGTCAATTCTGTAAT +
Preference number: 6 (lower is better)
Translates to: APAGSTAESPAL*LFHAGYGQFCN
Trigger: ATTACAGAATTGACCATAACCTGCGTGAAATAGTCAGAGAGCAGGAGACTCTGCCGTGGAGCCTGCGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490931.1
CDS TCA 72 bp ATCTGCTATGTGCCTGGCAATGACCTGGGGTCAAGGTaGACAAGACAAACAGTCCTGGCATGCATACAGGGC +
Preference number: 6 (lower is better)
Translates to: ICYVPGNDLGSR*TRQTVLACIQG
Trigger: GCCCTGTATGCATGCCAGGACTGTTTGTCTTGTTCACCTTGACCCCAGGTCATTGCCAGGCACATAGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS GCA 72 bp ACGTTAAGGAACGTGGGCATGACCTGGGGCAGGAACTaGACACATTTGAGTCCCAGGGACTTGAAGATGAAG +
Preference number: 6 (lower is better)
Translates to: TLRNVGMTWGRN*THLSPRDLKMK
Trigger: CTTCATCTTCAAGTCCCTGGGACTCAAATGTGTGCAGTTCCTGCCCCAGGTCATGCCCACGTTCCTTAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp AACTTGATAGAGACAATGCGGCCTGGGCTGTTGTCATaGATGAAGACACGCAGCATGTGTGGGATCAGCTGG +
Preference number: 6 (lower is better)
Translates to: NLIETMRPGLLS*MKTRSMCGISW
Trigger: CCAGCTGATCCCACACATGCTGCGTGTCTTCATGCATGACAACAGCCCAGGCCGCATTGTCTCTATCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp GCACTGTTGTGCCAAGGAGAAGAGGTCCTGATGCAGTaGCAGCACAGCTCTATAAAATGCCCCATCATGGGT +
Preference number: 6 (lower is better)
Translates to: ALLCQGEEVLMQ*QHSSIKCPIMG
Trigger: ACCCATGATGGGGCATTTTATAGAGCTGTGCTGGCACTGCATCAGGACCTCTTCTCCTTGGCACAACAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp GGGATTGTGCTCTCATTGATGCCCTGTAGATTCAGCTaGCACTCTCCAAGTTTCAGGAAGCATCGGGCCATG +
Preference number: 6 (lower is better)
Translates to: GIVLSLMPCRFS*HSPSFRKHRAM
Trigger: CATGGCCCGATGCTTCCTGAAACTTGGAGAGTGGCAGCTGAATCTACAGGGCATCAATGAGAGCACAATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS GCA 72 bp GGGCCTCTGCTTGGATGTGATGACTTGCAAAGACGGTaGTATGGACTGAATGCGAATGATTGGCTGGTTGGG +
Preference number: 6 (lower is better)
Translates to: GPLLGCDDLQRR*YGLNANDWLVG
Trigger: CCCAACCAGCCAATCATTCGCATTCAGTCCATAGCACCGTCTTTGCAAGTCATCACATCCAAGCAGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 72 bp CCGTTGCTGCCCATAAGTGTCAATTTCCGGGGCCTCTaGTTGGATGTGATGACTTGCAAAGACGGTGCTATG +
Preference number: 6 (lower is better)
Translates to: PLLPISVNFRGL*LDVMTCKDGAM
Trigger: CATAGCACCGTCTTTGCAAGTCATCACATCCAAGCAGAGGCCCCGGAAATTGACACTTATGGGCAGCAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 72 bp TTGGCCAGGTCGTCCCCAGCTGTATTATTGACGGCATaGTCAAACACCTCCACCTTCTGCATCAGAGTCAAG +
Preference number: 6 (lower is better)
Translates to: LARSSPAVLLTA*SNTSTFCIRVK
Trigger: CTTGACTCTGATGCAGAAGGTGGAGGTGTTTGAGCATGCCGTCAATAATACAGCTGGGGACGACCTGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 72 bp GTCATAGCAACCTCAAAGCAGTCCCCAAAGTCAATGTaGAGGATCTTCCCACTCAGACGGTCCAGCATCAGG +
Preference number: 6 (lower is better)
Translates to: VIATSKQSPKSM*RIFPLRRSSIR
Trigger: CCTGATGCTGGACCGTCTGAGTGGGAAGATCCTGCACATTGACTTTGGGGACTGCTTTGAGGTTGCTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000455339.1
ENST00000490931.1
CDS CCA 72 bp ACGGCCAATGGCCTTGGATGCCATTTCCATGACAACTaGGTCATTGGAGGGGAGGAGGTTCCGAAGATAGTT +
Preference number: 6 (lower is better)
Translates to: TANGLGCHFHDN*VIGGEEVPKIV
Trigger: AACTATCTTCGGAACCTCCTCCCCTCCAATGACCCAGTTGTCATGGAAATGGCATCCAAGGCCATTGGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp AGCCCTAACACACGGATGGCCTCTCTGCGTGTACCCTaGTTCTGCTCAGTCTTCAGAAAATTCAGTAGCACC +
Preference number: 6 (lower is better)
Translates to: SPNTRMASLRVP*FCSVFRKFSST
Trigger: GGTGCTACTGAATTTTCTGAAGACTGAGCAGAACCAGGGTACACGCAGAGAGGCCATCCGTGTGTTAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp TGGGCTGTTGTCATGCATGAAGACACGCAGCATGTGTaGGATCAGCTGGGGCAGGTAGAGCTTAAATTCACC +
Preference number: 6 (lower is better)
Translates to: WAVVMHEDTQHV*DQLGQVELKFT
Trigger: GGTGAATTTAAGCTCTACCTGCCCCAGCTGATCCCACACATGCTGCGTGTCTTCATGCATGACAACAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp CTGCCATCGCAGTTAATTCAGCATCCAGCAGGTCCCTaGCCTTGTCAATGCACTGTTGTGCCAAGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: LPSQLIQHPAGP*PCQCTVVPRRR
Trigger: TCTTCTCCTTGGCACAACAGTGCATTGACAAGGCCAGGGACCTGCTGGATGCTGAATTAACTGCGATGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp TCAGGGTCAGGATCTGTTATCCCAACTACGAGCAGTTaGCTAAGCACATCTGCCACCACTTGCACTGCGGTC +
Preference number: 6 (lower is better)
Translates to: SGSGSVIPTTSS*LSTSATTCTAV
Trigger: GACCGCAGTGCAAGTGGTGGCAGATGTGCTTAGCAAACTGCTCGTAGTTGGGATAACAGATCCTGACCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp GCCAGTAACTTGATAGAGACAATGCGGCCTGGGCTGTaGTCATGCATGAAGACACGCAGCATGTGTGGGATC +
Preference number: 6 (lower is better)
Translates to: ASNLIETMRPGL*SCMKTRSMCGI
Trigger: GATCCCACACATGCTGCGTGTCTTCATGCATGACAACAGCCCAGGCCGCATTGTCTCTATCAAGTTACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp TGGATGCTGAGGTTTTTCCGAAGAGATGTTGGGTCATaGGCCAGAAGGGTGTTAACCAGGCCGAAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: WMLRFFRRDVGS*ARRVLTRPKSC
Trigger: GCAGCTCTTCGGCCTGGTTAACACCCTTCTGGCCAATGACCCAACATCTCTTCGGAAAAACCTCAGCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 90 bp AGTAGCCCCAGGGCTTGGAAGGCCGCTGTACGTTCCTTCTCCTTCTaGACACAGCTTAGGACATGGTTCATGGTATCTTGGAGATACTGG +
Preference number: 6 (lower is better)
Translates to: SSPRAWKAAVRSFSF*TQLRTWFMVSWRYW
Trigger: CCAGTATCTCCAAGATACCATGAACCATGTCCTAAGCTGTGTCAAGAAGGAGAAGGAACGTACAGCGGCCTTCCAAGCCCTGGGGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 90 bp CTTCATGGGTCCTGTTTCCACTGGTCCACTAGCCAATGCATCCCCTaGGCCACTCCTAAGCATCCGATGCTGGTAAATCAAAGGATCCTC +
Preference number: 6 (lower is better)
Translates to: LHGSCFHWSTSQCIP*ATPKHPMLVNQRIL
Trigger: GAGGATCCTTTGATTTACCAGCATCGGATGCTTAGGAGTGGCCAAGGGGATGCATTGGCTAGTGGACCAGTGGAAACAGGACCCATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 90 bp CGAGGGGGTCTGTTACCCTCACTTAGGAAGCAGACACAGGCCATGTaGACGTATCAGGGTGAGAATGTCTTAGGAGAAGGAATCAGGGCA +
Preference number: 6 (lower is better)
Translates to: RGGLLPSLRKQTQAM*TYQGENVLGEGIRA
Trigger: TGCCCTGATTCCTTCTCCTAAGACATTCTCACCCTGATACGTCAACATGGCCTGTGTCTGCTTCCTAAGTGAGGGTAACAGACCCCCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473471.5
CDS CAA 90 bp TCCACATGTTTTTCATGTAGGCATAGGTCACCTGAGGGTGAACTGTaGGCAGAGGATGGTCAAGTTGCCGAGACGGATCAACTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: STCFSCRHRSPEGEL*AEDGQVAETDQLPG
Trigger: TCCTGGGAGTTGATCCGTCTCGGCAACTTGACCATCCTCTGCCAACAGTTCACCCTCAGGTGACCTATGCCTACATGAAAAACATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361445.9
ENST00000476768.1
ENST00000495435.1
CDS TCA 72 bp GGCTGTACAGCCTGGAAACTGGTGAAGGGGGTAATGTaGCGAGGTTTTGTTCCGAAGCCCATGAGATCTTTG +
Preference number: 6 (lower is better)
Translates to: GCTAWKLVKGVM*RGFVPKPMRSL
Trigger: CAAAGATCTCATGGGCTTCGGAACAAAACCTCGTCACATTACCCCCTTCACCAGTTTCCAGGCTGTACAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp GGGCTTGGAAGGCCGCTGTACGTTCCTTCTCCTTCTTaGCACAGCTTAGGACATGGTTCATGGTATCTTGGA +
Preference number: 6 (lower is better)
Translates to: GLGRPLYVPSPS*HSLGHGSWYLG
Trigger: TCCAAGATACCATGAACCATGTCCTAAGCTGTGTCAAGAAGGAGAAGGAACGTACAGCGGCCTTCCAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp TCCATGCGGATCTCCTTGTGCTCACTGTTCAGGAAATaGTCCGCACAGTGGCGAACAAATTGGGTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: SMRISLCSLFRK*SAQWRTNWVRE
Trigger: CTCTCTGACCCAATTTGTTCGCCACTGTGCGGATCATTTCCTGAACAGTGAGCACAAGGAGATCCGCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp AGGCTTGCATACTTGAGCCAGGTTCTCATGTCTTCATaGGGGCTGACCACAAGGGACCGCACCATAAGGATT +
Preference number: 6 (lower is better)
Translates to: RLAYLSQVLMSS*GLTTRDRTIRI
Trigger: AATCCTTATGGTGCGGTCCCTTGTGGTCAGCCCTCATGAAGACATGAGAACCTGGCTCAAGTATGCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361445.9
ENST00000476768.1
ENST00000495435.1
CDS GCA 72 bp AGCATGCTGATGCAAGTGAAGACTGTGGCATCCACCTaGATTGCCTTCTGCCTCTTATGGGCGAAGTCCTTT +
Preference number: 6 (lower is better)
Translates to: SMLMQVKTVAST*IAFCLLWAKSF
Trigger: AAAGGACTTCGCCCATAAGAGGCAGAAGGCAATGCAGGTGGATGCCACAGTCTTCACTTGCATCAGCATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp GCTGTGCTCACACATGTTCTTCAGAATCTTGTTGGCTaGATTGTGCCGGGCTGTCGTGGTAGACTTAGAAGC +
Preference number: 6 (lower is better)
Translates to: AVLTHVLQNLVG*IVPGCRGRLRS
Trigger: GCTTCTAAGTCTACCACGACAGCCCGGCACAATGCAGCCAACAAGATTCTGAAGAACATGTGTGAGCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS GCA 72 bp CAGAGTAGGAATCCGTCCTCGTTCGGGATCGCTTGTTaGCTTTGGTATTTGTGTCCATCAGCCTCCAGTTCA +
Preference number: 6 (lower is better)
Translates to: QSRNPSSFGIAC*LWYLCPSASSS
Trigger: TGAACTGGAGGCTGATGGACACAAATACCAAAGGCAACAAGCGATCCCGAACGAGGACGGATTCCTACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000455339.1
ENST00000473471.5
ENST00000490931.1
CDS CCA 72 bp TTTCATGTAGGCATAGGTCACCTGAGGGTGAACTGTTaGCAGAGGATGGTCAAGTTGCCGAGACGGATCAAC +
Preference number: 6 (lower is better)
Translates to: FHVGIGHLRVNC*QRMVKLPRRIN
Trigger: GTTGATCCGTCTCGGCAACTTGACCATCCTCTGCCAACAGTTCACCCTCAGGTGACCTATGCCTACATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361445.9
ENST00000476768.1
ENST00000495435.1
CDS CCA 72 bp GCCCCTCCACCTCCACTTCTGCAAGTCCAGTTTTACTaGAACACACAGCACGCTCCCTTGTTTAAGTACTGT +
Preference number: 6 (lower is better)
Translates to: APPPPLLQVQFY*NTQHAPLFKYC
Trigger: ACAGTACTTAAACAAGGGAGCGTGCTGTGTGTTCCAGTAAAACTGGACTTGCAGAAGTGGAGGTGGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455339.1
CDS CCA 72 bp GATCTTCCCACTCAGACGGTCCAGCATCAGGTTGGATaGGTGTCTTTGAGAAACAGAAGACAGATCAGGGAG +
Preference number: 6 (lower is better)
Translates to: DLPTQTVQHQVG*VSLRNRRQIRE
Trigger: CTCCCTGATCTGTCTTCTGTTTCTCAAAGACACCCATCCAACCTGATGCTGGACCGTCTGAGTGGGAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455339.1
ENST00000490931.1
CDS CCA 72 bp GCAGGATCTTCCCACTCAGACGGTCCAGCATCAGGTTaGATGGGTGTCTTTGAGAAACAGAAGACAGATCAG +
Preference number: 6 (lower is better)
Translates to: AGSSHSDGPASG*MGVFEKQKTDQ
Trigger: CTGATCTGTCTTCTGTTTCTCAAAGACACCCATCCAACCTGATGCTGGACCGTCTGAGTGGGAAGATCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455339.1
ENST00000490931.1
CDS CCA 72 bp AGAGCGAAGCAGATTAGGCGAGCATTCTGGAGAAGGTaGTCTGTTCTGGATGCATTGGGATACAGACCTTGC +
Preference number: 6 (lower is better)
Translates to: RAKQIRRAFWRR*SVLDALGYRPC
Trigger: GCAAGGTCTGTATCCCAATGCATCCAGAACAGACCACCTTCTCCAGAATGCTCGCCTAATCTGCTTCGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476768.1
CDS CAA 72 bp AGGGCTTGGAAGGCCGCTGTACGTTCCTTCTCCTTCTaGACACAGCTTAGGACATGGTTCATGGTATCTTGG +
Preference number: 6 (lower is better)
Translates to: RAWKAAVRSFSF*TQLRTWFMVSW
Trigger: CCAAGATACCATGAACCATGTCCTAAGCTGTGTCAAGAAGGAGAAGGAACGTACAGCGGCCTTCCAAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp TCCTGTTTCCACTGGTCCACTAGCCAATGCATCCCCTaGGCCACTCCTAAGCATCCGATGCTGGTAAATCAA +
Preference number: 6 (lower is better)
Translates to: SCFHWSTSQCIP*ATPKHPMLVNQ
Trigger: TTGATTTACCAGCATCGGATGCTTAGGAGTGGCCAAGGGGATGCATTGGCTAGTGGACCAGTGGAAACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp CATAAGGTGAGAACTCTGAGTGTATCCTGGAGGTTGTaGCCTCGTGACAAGGAGATGGAACGGAAGAAGCCC +
Preference number: 6 (lower is better)
Translates to: HKVRTLSVSWRL*PRDKEMERKKP
Trigger: GGGCTTCTTCCGTTCCATCTCCTTGTCACGAGGCAACAACCTCCAGGATACACTCAGAGTTCTCACCTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 90 bp GCCCATAAGTGTCAATTTCCGGGGCCTCTGCTTGGATGTGATGACTaGCAAAGACGGTGCTATGGACTGAATGCGAATGATTGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: AHKCQFPGPLLGCDD*QRRCYGLNANDWLV
Trigger: AACCAGCCAATCATTCGCATTCAGTCCATAGCACCGTCTTTGCAAGTCATCACATCCAAGCAGAGGCCCCGGAAATTGACACTTATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 90 bp GATCTTCCCACTCAGACGGTCCAGCATCAGGTTGGATGGGTGTCTTaGAGAAACAGAAGACAGATCAGGGAGGGATCAACAGAGATAACG +
Preference number: 6 (lower is better)
Translates to: DLPTQTVQHQVGWVS*RNRRQIREGSTEIT
Trigger: CGTTATCTCTGTTGATCCCTCCCTGATCTGTCTTCTGTTTCTCAAAGACACCCATCCAACCTGATGCTGGACCGTCTGAGTGGGAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455339.1
ENST00000490931.1
CDS TCA 72 bp AAGGAATACTACTCTCTCTGGGGTTCTGAGCGGCAATaGCTCTACAGCGTACCACCACTTGGTTTAGCGAGT +
Preference number: 6 (lower is better)
Translates to: KEYYSLWGSERQ*LYSVPPLGLAS
Trigger: ACTCGCTAAACCAAGTGGTGGTACGCTGTAGAGTCATTGCCGCTCAGAACCCCAGAGAGAGTAGTATTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS GCA 72 bp TCCCACACGGCCACAAAAATGTTGTCAAAGAAGGGTTaGACTTGCTGGAAGAAGAAGGTAGGGACGCTGATG +
Preference number: 6 (lower is better)
Translates to: SHTATKMLSKKG*TCWKKKVGTLM
Trigger: CATCAGCGTCCCTACCTTCTTCTTCCAGCAAGTGCAACCCTTCTTTGACAACATTTTTGTGGCCGTGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp TCAACAAGGCTCCATGGATCCGATCATCCCGATTCATaGCCTTCTCTTTGGCCAAGGTCTCATCAAATCCCT +
Preference number: 6 (lower is better)
Translates to: STRLHGSDHPDS*PSLWPRSHQIP
Trigger: AGGGATTTGATGAGACCTTGGCCAAAGAGAAGGGCATGAATCGGGATGATCGGATCCATGGAGCCTTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp TCACACATGTTCTTCAGAATCTTGTTGGCTGCATTGTaGCGGGCTGTCGTGGTAGACTTAGAAGCCACTGTC +
Preference number: 6 (lower is better)
Translates to: SHMFFRILLAAL*RAVVVDLEATV
Trigger: GACAGTGGCTTCTAAGTCTACCACGACAGCCCGGCACAATGCAGCCAACAAGATTCTGAAGAACATGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 72 bp GCCACAAAAATGTTGTCAAAGAAGGGTTGCACTTGCTaGAAGAAGAAGGTAGGGACGCTGATGGCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: ATKMLSKKGCTC*KKKVGTLMASS
Trigger: TGAGCTGGCCATCAGCGTCCCTACCTTCTTCTTCCAGCAAGTGCAACCCTTCTTTGACAACATTTTTGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp ATTCGGACCAGCTCGTTAAGGATCAACAAGGCTCCATaGATCCGATCATCCCGATTCATGCCCTTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: IRTSSLRINKAP*IRSSRFMPFSL
Trigger: CAAAGAGAAGGGCATGAATCGGGATGATCGGATCCATGGAGCCTTGTTGATCCTTAACGAGCTGGTCCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp CTTTGTAGTGTAGTGCTTTGGCATATGCTCGGCACTTaGCAGCTCTCTCACCCAGCAGAACAATGCCATTGT +
Preference number: 6 (lower is better)
Translates to: LCSVVLWHMLGT*QLSHPAEQCHC
Trigger: ACAATGGCATTGTTCTGCTGGGTGAGAGAGCTGCCAAGTGCCGAGCATATGCCAAAGCACTACACTACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp CTTTCTGGAACTCCAGTTCTTTGTAGTGTAGTGCTTTaGCATATGCTCGGCACTTGGCAGCTCTCTCACCCA +
Preference number: 6 (lower is better)
Translates to: LSGTPVLCSVVL*HMLGTWQLSHP
Trigger: TGGGTGAGAGAGCTGCCAAGTGCCGAGCATATGCCAAAGCACTACACTACAAAGAACTGGAGTTCCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp TTGCAAAGACGGTGCTATGGACTGAATGCGAATGATTaGCTGGTTGGGGTCATATGTTCCTGGCACAGCCAA +
Preference number: 6 (lower is better)
Translates to: LQRRCYGLNAND*LVGVICSWHSQ
Trigger: TTGGCTGTGCCAGGAACATATGACCCCAACCAGCCAATCATTCGCATTCAGTCCATAGCACCGTCTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 72 bp GTATCTCTGGATGCTGAGGTTTTTCCGAAGAGATGTTaGGTCATTGGCCAGAAGGGTGTTAACCAGGCCGAA +
Preference number: 6 (lower is better)
Translates to: VSLDAEVFPKRC*VIGQKGVNQAE
Trigger: TTCGGCCTGGTTAACACCCTTCTGGCCAATGACCCAACATCTCTTCGGAAAAACCTCAGCATCCAGAGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CCA 72 bp ATGACCTGGGGTCAAGGTGAACAAGACAAACAGTCCTaGCATGCATACAGGGCCATGACGTTGATGGTAGAA +
Preference number: 6 (lower is better)
Translates to: MTWGQGEQDKQS*HAYRAMTLMVE
Trigger: TTCTACCATCAACGTCATGGCCCTGTATGCATGCCAGGACTGTTTGTCTTGTTCACCTTGACCCCAGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS CAA 72 bp GTCCCACACGGCCACAAAAATGTTGTCAAAGAAGGGTaGCACTTGCTGGAAGAAGAAGGTAGGGACGCTGAT +
Preference number: 6 (lower is better)
Translates to: VPHGHKNVVKEG*HLLEEEGRDAD
Trigger: ATCAGCGTCCCTACCTTCTTCTTCCAGCAAGTGCAACCCTTCTTTGACAACATTTTTGTGGCCGTGTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp ATGGCCTGTTTGGGGTCCCACACGGCCACAAAAATGTaGTCAAAGAAGGGTTGCACTTGCTGGAAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: MACLGSHTATKM*SKKGCTCWKKK
Trigger: CTTCTTCTTCCAGCAAGTGCAACCCTTCTTTGACAACATTTTTGTGGCCGTGTGGGACCCCAAACAGGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp CCATGGATCCGATCATCCCGATTCATGCCCTTCTCTTaGGCCAAGGTCTCATCAAATCCCTTCTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: PWIRSSRFMPFS*AKVSSNPFSAS
Trigger: AGAAGCAGAGAAGGGATTTGATGAGACCTTGGCCAAAGAGAAGGGCATGAATCGGGATGATCGGATCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp TTTTCATGTAGGCATAGGTCACCTGAGGGTGAACTGTaGGCAGAGGATGGTCAAGTTGCCGAGACGGATCAA +
Preference number: 6 (lower is better)
Translates to: FSCRHRSPEGEL*AEDGQVAETDQ
Trigger: TTGATCCGTCTCGGCAACTTGACCATCCTCTGCCAACAGTTCACCCTCAGGTGACCTATGCCTACATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361445.9
ENST00000476768.1
ENST00000495435.1
CDS CAA 72 bp TGCTCACACATGTTCTTCAGAATCTTGTTGGCTGCATaGTGCCGGGCTGTCGTGGTAGACTTAGAAGCCACT +
Preference number: 6 (lower is better)
Translates to: CSHMFFRILLAA*CRAVVVDLEAT
Trigger: AGTGGCTTCTAAGTCTACCACGACAGCCCGGCACAATGCAGCCAACAAGATTCTGAAGAACATGTGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 90 bp AGGTCGGAATGCAGCCAAGCGGGGCAACAAATTAAGGATTGTCATTaGGATCAGCGAGTTCTTGCTATTCCTGCATTTCAGCACCCACTG +
Preference number: 6 (lower is better)
Translates to: RSECSQAGQQIKDCH*DQRVLAIPAFQHPL
Trigger: CAGTGGGTGCTGAAATGCAGGAATAGCAAGAACTCGCTGATCCAAATGACAATCCTTAATTTGTTGCCCCGCTTGGCTGCATTCCGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 90 bp GCAGAGGTTTTCATGGGATGTCGCTTGTTTGATGAGCAGCTCAACTaGCGTTGGAACATCCAAAGTGTCATCATGAGAGAAGTCCCGACC +
Preference number: 6 (lower is better)
Translates to: AEVFMGCRLFDEQLN*RWNIQSVIMREVPT
Trigger: GGTCGGGACTTCTCTCATGATGACACTTTGGATGTTCCAACGCAAGTTGAGCTGCTCATCAAACAAGCGACATCCCATGAAAACCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000473471.5
ENST00000490931.1
CDS CAA 90 bp GCACCAGCCAATATAGCACTGGCAGAGGTTTTCATGGGATGTCGCTaGTTTGATGAGCAGCTCAACTTGCGTTGGAACATCCAAAGTGTC +
Preference number: 6 (lower is better)
Translates to: APANIALAEVFMGCR*FDEQLNLRWNIQSV
Trigger: GACACTTTGGATGTTCCAACGCAAGTTGAGCTGCTCATCAAACAAGCGACATCCCATGAAAACCTCTGCCAGTGCTATATTGGCTGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000473471.5
ENST00000490931.1
CDS CAA 90 bp CAGATTAGGCGAGCATTCTGGAGAAGGTGGTCTGTTCTGGATGCATaGGGATACAGACCTTGCGGGCACTCTTCCACATGTTTTTCATGT +
Preference number: 6 (lower is better)
Translates to: QIRRAFWRRWSVLDA*GYRPCGHSSTCFSC
Trigger: ACATGAAAAACATGTGGAAGAGTGCCCGCAAGGTCTGTATCCCAATGCATCCAGAACAGACCACCTTCTCCAGAATGCTCGCCTAATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476768.1
CDS TCA 72 bp TGTAGTACTGCAGCACTTTGGGGATTGTGCTCTCATTaGTGCCCTGTAGATTCAGCTGCCACTCTCCAAGTT +
Preference number: 6 (lower is better)
Translates to: CSTAALWGLCSH*CPVDSAATLQV
Trigger: AACTTGGAGAGTGGCAGCTGAATCTACAGGGCATCAATGAGAGCACAATCCCCAAAGTGCTGCAGTACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000495435.1
CDS TCA 72 bp AGCTCAACTTGCGTTGGAACATCCAAAGTGTCATCATaGGAGAAGTCCCGACCAGTGAGCTTATCTCGAACC +
Preference number: 6 (lower is better)
Translates to: SSTCVGTSKVSS*EKSRPVSLSRT
Trigger: GGTTCGAGATAAGCTCACTGGTCGGGACTTCTCTCATGATGACACTTTGGATGTTCCAACGCAAGTTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000473471.5
ENST00000490931.1
CDS GCA 72 bp GAGATACTGGGTATCTGTGAAGGCAGAAGGTCGGAATaGAGCCAAGCGGGGCAACAAATTAAGGATTGTCAT +
Preference number: 6 (lower is better)
Translates to: EILGICEGRRSE*SQAGQQIKDCH
Trigger: ATGACAATCCTTAATTTGTTGCCCCGCTTGGCTGCATTCCGACCTTCTGCCTTCACAGATACCCAGTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp ACTTTGTGGAGCACTAACTATATAACGTACTATGAGTaGACTGCGAGAAGGGCACAGCAAGAGGAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: TLWSTNYITYYE*TARRAQQEEQE
Trigger: CTCCTGCTCCTCTTGCTGTGCCCTTCTCGCAGTGCACTCATAGTACGTTATATAGTTAGTGCTCCACAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS GCA 72 bp AGGTGGTCTGTTCTGGATGCATTGGGATACAGACCTTaGGGGCACTCTTCCACATGTTTTTCATGTAGGCAT +
Preference number: 6 (lower is better)
Translates to: RWSVLDALGYRP*GHSSTCFSCRH
Trigger: ATGCCTACATGAAAAACATGTGGAAGAGTGCCCGCAAGGTCTGTATCCCAATGCATCCAGAACAGACCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476768.1
CDS CCA 72 bp GGATGTCGCTTGTTTGATGAGCAGCTCAACTTGCGTTaGAACATCCAAAGTGTCATCATGAGAGAAGTCCCG +
Preference number: 6 (lower is better)
Translates to: GCRLFDEQLNLR*NIQSVIMREVP
Trigger: CGGGACTTCTCTCATGATGACACTTTGGATGTTCCAACGCAAGTTGAGCTGCTCATCAAACAAGCGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000473471.5
ENST00000490931.1
CDS CCA 72 bp GTACATTTAGGGGAGAGCAGAAATGGCAAGCAGAAGTaGGGGCAAGCAGCAGTCATCACAATATTTCAAGGG +
Preference number: 6 (lower is better)
Translates to: VHLGESRNGKQK*GQAAVITIFQG
Trigger: CCCTTGAAATATTGTGATGACTGCTGCTTGCCCCCACTTCTGCTTGCCATTTCTGCTCTCCCCTAAATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376838.5
CDS CAA 72 bp ACTGTTCAGGAAATGATCCGCACAGTGGCGAACAAATaGGGTCAGAGAGTGGCCTTCAAATTCAAAGCTGCC +
Preference number: 6 (lower is better)
Translates to: TVQEMIRTVANK*GQRVAFKFKAA
Trigger: GGCAGCTTTGAATTTGAAGGCCACTCTCTGACCCAATTTGTTCGCCACTGTGCGGATCATTTCCTGAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp AACCATAAGGTGAGAACTCTGAGTGTATCCTGGAGGTaGTTGCCTCGTGACAAGGAGATGGAACGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: NHKVRTLSVSWR*LPRDKEMERKK
Trigger: CTTCTTCCGTTCCATCTCCTTGTCACGAGGCAACAACCTCCAGGATACACTCAGAGTTCTCACCTTATGGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 72 bp TGTCAATTTCCGGGGCCTCTGCTTGGATGTGATGACTaGCAAAGACGGTGCTATGGACTGAATGCGAATGAT +
Preference number: 6 (lower is better)
Translates to: CQFPGPLLGCDD*QRRCYGLNAND
Trigger: ATCATTCGCATTCAGTCCATAGCACCGTCTTTGCAAGTCATCACATCCAAGCAGAGGCCCCGGAAATTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361445.9
ENST00000376838.5
CDS CAA 72 bp CTGTTACCCTCACTTAGGAAGCAGACACAGGCCATGTaGACGTATCAGGGTGAGAATGTCTTAGGAGAAGGA +
Preference number: 6 (lower is better)
Translates to: LLPSLRKQTQAM*TYQGENVLGEG
Trigger: TCCTTCTCCTAAGACATTCTCACCCTGATACGTCAACATGGCCTGTGTCTGCTTCCTAAGTGAGGGTAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473471.5
CDS CAA 90 bp AACAAGGCTCCATGGATCCGATCATCCCGATTCATGCCCTTCTCTTaGGCCAAGGTCTCATCAAATCCCTTCTCTGCTTCTTCAAATGTG +
Preference number: 6 (lower is better)
Translates to: NKAPWIRSSRFMPFS*AKVSSNPFSASSNV
Trigger: CACATTTGAAGAAGCAGAGAAGGGATTTGATGAGACCTTGGCCAAAGAGAAGGGCATGAATCGGGATGATCGGATCCATGGAGCCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 90 bp AGGCCACTAACCTGTGCCAATTCTCCTATTGTTGCCAGGACATTATaGATCACACCTGGGTTTGGATCAGGGTCTGGATCTTTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: RPLTCANSPIVARTL*ITPGFGSGSGSFSF
Trigger: GAAACTGAAAGATCCAGACCCTGATCCAAACCCAGGTGTGATCAATAATGTCCTGGCAACAATAGGAGAATTGGCACAGGTTAGTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp CCTGTGCCAATTCTCCTATTGTTGCCAGGACATTATTaGTCACACCTGGGTTTGGATCAGGGTCTGGATCTT +
Preference number: 6 (lower is better)
Translates to: PVPILLLLPGHY*SHLGLDQGLDL
Trigger: AAGATCCAGACCCTGATCCAAACCCAGGTGTGATCAATAATGTCCTGGCAACAATAGGAGAATTGGCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp TTCCACACCGTCCAAAATTTCCTTTGTCAGGTGAAGTaGTGGTTAGATGCCACCAACCCAAGTGCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: FHTVQNFLCQVK*WLDATNPSALF
Trigger: GAAGAGAGCACTTGGGTTGGTGGCATCTAACCATCACTTCACCTGACAAAGGAAATTTTGGACGGTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490931.1
CDS TCA 72 bp TATTTGGATAAAGGAATACTACTCTCTCTGGGGTTCTaGGCGGCAATGACTCTACAGCGTACCACCACTTGG +
Preference number: 6 (lower is better)
Translates to: YLDKGILLSLGF*AAMTLQRTTTW
Trigger: CCAAGTGGTGGTACGCTGTAGAGTCATTGCCGCTCAGAACCCCAGAGAGAGTAGTATTCCTTTATCCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS GCA 72 bp TTCCAGGCCACTAACCTGTGCCAATTCTCCTATTGTTaGCAGGACATTATTGATCACACCTGGGTTTGGATC +
Preference number: 6 (lower is better)
Translates to: FQATNLCQFSYC*QDIIDHTWVWI
Trigger: GATCCAAACCCAGGTGTGATCAATAATGTCCTGGCAACAATAGGAGAATTGGCACAGGTTAGTGGCCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS GCA 72 bp ATGGCATATTCTAACACTCCGGCCGCTGCCTCCGGCTaGTGTAGCTTATTATTAATGCTGATGAGAGATTCT +
Preference number: 6 (lower is better)
Translates to: MAYSNTPAAASG*CSLLLMLMRDS
Trigger: AGAATCTCTCATCAGCATTAATAATAAGCTACAGCAGCCGGAGGCAGCGGCCGGAGTGTTAGAATATGCCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp GCAGCCAAGCGGGGCAACAAATTAAGGATTGTCATTTaGATCAGCGAGTTCTTGCTATTCCTGCATTTCAGC +
Preference number: 6 (lower is better)
Translates to: AAKRGNKLRIVI*ISEFLLFLHFS
Trigger: GCTGAAATGCAGGAATAGCAAGAACTCGCTGATCCAAATGACAATCCTTAATTTGTTGCCCCGCTTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp TTCTTGACACAGCTTAGGACATGGTTCATGGTATCTTaGAGATACTGGGTATCTGTGAAGGCAGAAGGTCGG +
Preference number: 6 (lower is better)
Translates to: FLTQLRTWFMVS*RYWVSVKAEGR
Trigger: CCGACCTTCTGCCTTCACAGATACCCAGTATCTCCAAGATACCATGAACCATGTCCTAAGCTGTGTCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp ACCTGTGCCAATTCTCCTATTGTTGCCAGGACATTATaGATCACACCTGGGTTTGGATCAGGGTCTGGATCT +
Preference number: 6 (lower is better)
Translates to: TCANSPIVARTL*ITPGFGSGSGS
Trigger: AGATCCAGACCCTGATCCAAACCCAGGTGTGATCAATAATGTCCTGGCAACAATAGGAGAATTGGCACAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CCA 72 bp GTACGTTCCTTCTCCTTCTTGACACAGCTTAGGACATaGTTCATGGTATCTTGGAGATACTGGGTATCTGTG +
Preference number: 6 (lower is better)
Translates to: VRSFSFLTQLRT*FMVSWRYWVSV
Trigger: CACAGATACCCAGTATCTCCAAGATACCATGAACCATGTCCTAAGCTGTGTCAAGAAGGAGAAGGAACGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp TGCAGCCAAGCGGGGCAACAAATTAAGGATTGTCATTaGGATCAGCGAGTTCTTGCTATTCCTGCATTTCAG +
Preference number: 6 (lower is better)
Translates to: CSQAGQQIKDCH*DQRVLAIPAFQ
Trigger: CTGAAATGCAGGAATAGCAAGAACTCGCTGATCCAAATGACAATCCTTAATTTGTTGCCCCGCTTGGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp AATATAGCACTGGCAGAGGTTTTCATGGGATGTCGCTaGTTTGATGAGCAGCTCAACTTGCGTTGGAACATC +
Preference number: 6 (lower is better)
Translates to: NIALAEVFMGCR*FDEQLNLRWNI
Trigger: GATGTTCCAACGCAAGTTGAGCTGCTCATCAAACAAGCGACATCCCATGAAAACCTCTGCCAGTGCTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000473471.5
ENST00000490931.1
CDS CAA 72 bp GACAAACAGTCCTGGCATGCATACAGGGCCATGACGTaGATGGTAGAATACATCATAAAACAAAAGGGACCC +
Preference number: 6 (lower is better)
Translates to: DKQSWHAYRAMT*MVEYIIKQKGP
Trigger: GGGTCCCTTTTGTTTTATGATGTATTCTACCATCAACGTCATGGCCCTGTATGCATGCCAGGACTGTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS CAA 90 bp GGTGAACAAGACAAACAGTCCTGGCATGCATACAGGGCCATGACGTaGATGGTAGAATACATCATAAAACAAAAGGGACCCACATTAGGA +
Preference number: 6 (lower is better)
Translates to: GEQDKQSWHAYRAMT*MVEYIIKQKGPTLG
Trigger: TCCTAATGTGGGTCCCTTTTGTTTTATGATGTATTCTACCATCAACGTCATGGCCCTGTATGCATGCCAGGACTGTTTGTCTTGTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS CCA 72 bp CGACCAGTGAGCTTATCTCGAACCCTGTTAATAATCTaGATAGCTTTCTTATTTAGGGCCTCTGGTTTCACC +
Preference number: 6 (lower is better)
Translates to: RPVSLSRTLLII*IAFLFRASGFT
Trigger: GGTGAAACCAGAGGCCCTAAATAAGAAAGCTATCCAGATTATTAACAGGGTTCGAGATAAGCTCACTGGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000473471.5
ENST00000490931.1
CDS CAA 72 bp AACAAATTAAGGATTGTCATTTGGATCAGCGAGTTCTaGCTATTCCTGCATTTCAGCACCCACTGGCACACC +
Preference number: 6 (lower is better)
Translates to: NKLRIVIWISEF*LFLHFSTHWHT
Trigger: GGTGTGCCAGTGGGTGCTGAAATGCAGGAATAGCAAGAACTCGCTGATCCAAATGACAATCCTTAATTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp TTCATGGGATGTCGCTTGTTTGATGAGCAGCTCAACTaGCGTTGGAACATCCAAAGTGTCATCATGAGAGAA +
Preference number: 6 (lower is better)
Translates to: FMGCRLFDEQLN*RWNIQSVIMRE
Trigger: TTCTCTCATGATGACACTTTGGATGTTCCAACGCAAGTTGAGCTGCTCATCAAACAAGCGACATCCCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361445.9
ENST00000376838.5
ENST00000473471.5
ENST00000490931.1
CDS GCA 72 bp ATTAATTTAAATCATTCCTTCTGGTGTCAGGGTATCTaGCGATCAGAGAAAACAGGCATGTTTCCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: INLNHSFWCQGI*RSEKTGMFPAA
Trigger: GGCTGCTGGAAACATGCCTGTTTTCTCTGATCGGCAGATACCCTGACACCAGAAGGAATGATTTAAATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS CCA 72 bp AGAGCCACCTGCCTTTTGGCCAACAAAGAGGAATCCTaGAGCATGTCCATGATGATAATAAAAAGTTCATCA +
Preference number: 6 (lower is better)
Translates to: RATCLLANKEES*SMSMMIIKSSS
Trigger: TGATGAACTTTTTATTATCATCATGGACATGCTCCAGGATTCCTCTTTGTTGGCCAAAAGGCAGGTGGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp ACCACAATTTGCTCAATGAGAAGAATGATCGTGCTCTaGATTGAGGTGTTCATGACCCAGAATTCTCTCATG +
Preference number: 6 (lower is better)
Translates to: TTICSMRRMIVL*IEVFMTQNSLM
Trigger: CATGAGAGAATTCTGGGTCATGAACACCTCAATTCAGAGCACGATCATTCTTCTCATTGAGCAAATTGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS TCA 72 bp AATAGCTTTGTAACAGGAAGAGACTCCCTGACATTGTaGGTAGGTGGTTTAAACACTGTTTCTTTTCTGGCC +
Preference number: 6 (lower is better)
Translates to: NSFVTGRDSLTL*VGGLNTVSFLA
Trigger: GGCCAGAAAAGAAACAGTGTTTAAACCACCTACTCACAATGTCAGGGAGTCTCTTCCTGTTACAAAGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476768.1
CDS CAA 72 bp CCAGTTAATAGTGTTTACCGGATGTATTTTCCAGCTTaGGACATGCAAGCTGTCCTAGAGAGAGTATTACTC +
Preference number: 6 (lower is better)
Translates to: PVNSVYRMYFPA*DMQAVLERVLL
Trigger: GAGTAATACTCTCTCTAGGACAGCTTGCATGTCCAAAGCTGGAAAATACATCCGGTAAACACTATTAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS TCA 72 bp ATTGGGAAATTCGTTTGTATGCCTTGCCAAAAACCTTaGACACAGGTGTATCCGTTTTCTCAACTAAGGAGA +
Preference number: 6 (lower is better)
Translates to: IGKFVCMPCQKP*TQVYPFSQLRR
Trigger: TCTCCTTAGTTGAGAAAACGGATACACCTGTGTTCAAGGTTTTTGGCAAGGCATACAAACGAATTTCCCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS CCA 72 bp ATTGATTCGGTGTCGCACCAGAACTTTATTCACCATTaGAATGAAAATTTGGTACTTCTTCCCCAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: IDSVSHQNFIHH*NENLVLLPQLK
Trigger: TTTCAGCTGGGGAAGAAGTACCAAATTTTCATTCCAATGGTGAATAAAGTTCTGGTGCGACACCGAATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361445.9
CDS CAA 72 bp AACTTTCTGAATAATTGGGAAATTCGTTTGTATGCCTaGCCAAAAACCTTGAACACAGGTGTATCCGTTTTC +
Preference number: 6 (lower is better)
Translates to: NFLNNWEIRLYA*PKTLNTGVSVF
Trigger: GAAAACGGATACACCTGTGTTCAAGGTTTTTGGCAAGGCATACAAACGAATTTCCCAATTATTCAGAAAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS CAA 90 bp TTTCTGAATAATTGGGAAATTCGTTTGTATGCCTTGCCAAAAACCTaGAACACAGGTGTATCCGTTTTCTCAACTAAGGAGAATAGATTG +
Preference number: 6 (lower is better)
Translates to: FLNNWEIRLYALPKT*NTGVSVFSTKENRL
Trigger: CAATCTATTCTCCTTAGTTGAGAAAACGGATACACCTGTGTTCAAGGTTTTTGGCAAGGCATACAAACGAATTTCCCAATTATTCAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495435.1
CDS CCA 72 bp ACATATAACTGTGATCACATTCATTGGTTTGATCAATaGTATACACACCATCTCCTCAACTATGATTCACTC +
Preference number: 6 (lower is better)
Translates to: TYNCDHIHWFDQ*YTHHLLNYDSL
Trigger: GAGTGAATCATAGTTGAGGAGATGGTGTGTATACCATTGATCAAACCAATGAATGTGATCACAGTTATATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476768.1
CDS CCA 72 bp CTAGATACAAATACATATAACTGTGATCACATTCATTaGTTTGATCAATGGTATACACACCATCTCCTCAAC +
Preference number: 6 (lower is better)
Translates to: LDTNTYNCDHIH*FDQWYTHHLLN
Trigger: GTTGAGGAGATGGTGTGTATACCATTGATCAAACCAATGAATGTGATCACAGTTATATGTATTTGTATCTAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476768.1
CDS CAA 72 bp ACTAAGGAGAATAGATTGATCACAACTAACCTTTACTaGATGAGTAAGAATTCTACAATGACCCAGGTTTCA +
Preference number: 6 (lower is better)
Translates to: TKENRLITTNLY*MSKNSTMTQVS
Trigger: TGAAACCTGGGTCATTGTAGAATTCTTACTCATCAAGTAAAGGTTAGTTGTGATCAATCTATTCTCCTTAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495435.1