Pregenerated sensors for MTNR1A (Homo sapiens)
Ensembl gene IDs: ENSG00000168412Ensembl transcript IDs: ENST00000307161.5
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGAGGCGTTGGGCAGCGCGCTGCCGTTGCCCTGCATGGTCCCTGTaGGCGTCCCGGCCGCGGGGCCATCGCCCGCCTCGTCCGCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: GRRWAARCRCPAWSL*ASRPRGHRPPRPPA Trigger: GGCGGGCGGACGAGGCGGGCGATGGCCCCGCGGCCGGGACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS GCA 90 bp | CGCCGTCCCCGCGGAGCACGGGCTGGGAGGCGTTGGGCAGCGCGCTaGCGTTGCCCTGCATGGTCCCTGTGCGCGTCCCGGCCGCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RRPRGARAGRRWAAR*RCPAWSLCASRPRG Trigger: GCCCCGCGGCCGGGACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGCTCCGCGGGGACGGCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS GCA 90 bp | CGGAGCACGGGCTGGGAGGCGTTGGGCAGCGCGCTGCCGTTGCCCTaGATGGTCCCTGTGCGCGTCCCGGCCGCGGGGCCATCGCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: RSTGWEALGSALPLP*MVPVRVPAAGPSPA Trigger: GGCGGGCGATGGCCCCGCGGCCGGGACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGCTCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS GCA 90 bp | CCCCGCGGAGCACGGGCTGGGAGGCGTTGGGCAGCGCGCTGCCGTTaGCCTGCATGGTCCCTGTGCGCGTCCCGGCCGCGGGGCCATCGC | + |
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Preference number: 5 (lower is better) Translates to: PRGARAGRRWAARCR*PAWSLCASRPRGHR Trigger: GCGATGGCCCCGCGGCCGGGACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGCTCCGCGGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CCA 90 bp | ACGAGGGCCGCGCGCCGTCCCCGCGGAGCACGGGCTGGGAGGCGTTaGGCAGCGCGCTGCCGTTGCCCTGCATGGTCCCTGTGCGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: TRAARRPRGARAGRR*AARCRCPAWSLCAS Trigger: GGACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGCTCCGCGGGGACGGCGCGCGGCCCTCGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CCA 90 bp | GACGCCAGCCACGAGGGCCGCGCGCCGTCCCCGCGGAGCACGGGCTaGGAGGCGTTGGGCAGCGCGCTGCCGTTGCCCTGCATGGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: DASHEGRAPSPRSTG*EALGSALPLPCMVP Trigger: AGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGCTCCGCGGGGACGGCGCGCGGCCCTCGTGGCTGGCGTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS GCA 90 bp | GGCGAAGGTGCACGAGTAGATCCTCGGGTCGTACTGGAGAGTCCCTaGACGGAGGTTGGGCAGGACGGCCGCCAGCGTCAGGAGCCATAT | + |
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Preference number: 5 (lower is better) Translates to: GEGARVDPRVVLESP*TEVGQDGRQRQEPY Trigger: ATATGGCTCCTGACGCTGGCGGCCGTCCTGCCCAACCTCCGTGCAGGGACTCTCCAGTACGACCCGAGGATCTACTCGTGCACCTTCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS TCA 90 bp | CTGCACGGAGGTTGGGCAGGACGGCCGCCAGCGTCAGGAGCCATATaGGGAGCACGTAGCAGAGGGAGTTCTTGCTGCTGTACAGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LHGGWAGRPPASGAI*GARSRGSSCCCTVC Trigger: ACAAACTGTACAGCAGCAAGAACTCCCTCTGCTACGTGCTCCTCATATGGCTCCTGACGCTGGCGGCCGTCCTGCCCAACCTCCGTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CCA 90 bp | AAGGACAAAAACCACAAACATGGTGACAAAATTCCTGAAGTCCTGTaGTTTCAGTTTGGGTTTGCGGTCAGGTTTCACCCTCTGTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: KDKNHKHGDKIPEVL*FQFGFAVRFHPLSD Trigger: GTCAGACAGAGGGTGAAACCTGACCGCAAACCCAAACTGAAACCACAGGACTTCAGGAATTTTGTCACCATGTTTGTGGTTTTTGTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CCA 90 bp | TTTTTAAACGGAGTCCACCTTTACTACATTATTGTTGGTCATCAGTaGAGACGGTTTCCATTTAACCCTATCGGCCACGTCGTTAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: FLNGVHLYYIIVGHQ*RRFPFNPIGHVVRA Trigger: AGCTCTAACGACGTGGCCGATAGGGTTAAATGGAAACCGTCTCCACTGATGACCAACAATAATGTAGTAAAGGTGGACTCCGTTTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CAA 72 bp | GGGGCCATCGCCCGCCTCGTCCGCCCGCCCGACCACTaGTTAAGGCTCCGCCCGGCGCTCCCCGCGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: GAIARLVRPPDH*LRLRPALPAPT Trigger: CGTGGGCGCGGGGAGCGCCGGGCGGAGCCTTAACAAGTGGTCGGGCGGGCGGACGAGGCGGGCGATGGCCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CAA 90 bp | TCCCCGCGGAGCACGGGCTGGGAGGCGTTGGGCAGCGCGCTGCCGTaGCCCTGCATGGTCCCTGTGCGCGTCCCGGCCGCGGGGCCATCG | + |
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Preference number: 6 (lower is better) Translates to: SPRSTGWEALGSALP*PCMVPVRVPAAGPS Trigger: CGATGGCCCCGCGGCCGGGACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGCTCCGCGGGGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CAA 90 bp | CACGAGGGCCGCGCGCCGTCCCCGCGGAGCACGGGCTGGGAGGCGTaGGGCAGCGCGCTGCCGTTGCCCTGCATGGTCCCTGTGCGCGTC | + |
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Preference number: 6 (lower is better) Translates to: HEGRAPSPRSTGWEA*GSALPLPCMVPVRV Trigger: GACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGCTCCGCGGGGACGGCGCGCGGCCCTCGTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS GCA 72 bp | TGGGCAGCGCGCTGCCGTTGCCCTGCATGGTCCCTGTaGGCGTCCCGGCCGCGGGGCCATCGCCCGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: WAARCRCPAWSL*ASRPRGHRPPR Trigger: ACGAGGCGGGCGATGGCCCCGCGGCCGGGACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS GCA 72 bp | GGCTGGGAGGCGTTGGGCAGCGCGCTGCCGTTGCCCTaGATGGTCCCTGTGCGCGTCCCGGCCGCGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GWEALGSALPLP*MVPVRVPAAGP Trigger: TGGCCCCGCGGCCGGGACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS GCA 72 bp | GCACGGGCTGGGAGGCGTTGGGCAGCGCGCTGCCGTTaGCCTGCATGGTCCCTGTGCGCGTCCCGGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: ARAGRRWAARCR*PAWSLCASRPR Trigger: CCGCGGCCGGGACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CCA 72 bp | GCGCGCCGTCCCCGCGGAGCACGGGCTGGGAGGCGTTaGGCAGCGCGCTGCCGTTGCCCTGCATGGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: ARRPRGARAGRR*AARCRCPAWSL Trigger: CAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGCTCCGCGGGGACGGCGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CAA 72 bp | CGCGCGCCGTCCCCGCGGAGCACGGGCTGGGAGGCGTaGGGCAGCGCGCTGCCGTTGCCCTGCATGGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RAPSPRSTGWEA*GSALPLPCMVP Trigger: AGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGCTCCGCGGGGACGGCGCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS GCA 72 bp | CGCGGAGCACGGGCTGGGAGGCGTTGGGCAGCGCGCTaGCGTTGCCCTGCATGGTCCCTGTGCGCGTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RGARAGRRWAAR*RCPAWSLCASR Trigger: CCGGGACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGCTCCGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CAA 72 bp | AGCACGGGCTGGGAGGCGTTGGGCAGCGCGCTGCCGTaGCCCTGCATGGTCCCTGTGCGCGTCCCGGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: STGWEALGSALP*PCMVPVRVPAA Trigger: CGCGGCCGGGACGCGCACAGGGACCATGCAGGGCAACGGCAGCGCGCTGCCCAACGCCTCCCAGCCCGTGCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS GCA 72 bp | GCACGAGTAGATCCTCGGGTCGTACTGGAGAGTCCCTaGACGGAGGTTGGGCAGGACGGCCGCCAGCGTCAG | + |
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Preference number: 6 (lower is better) Translates to: ARVDPRVVLESP*TEVGQDGRQRQ Trigger: CTGACGCTGGCGGCCGTCCTGCCCAACCTCCGTGCAGGGACTCTCCAGTACGACCCGAGGATCTACTCGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CAA 72 bp | ATCCTCGGGTCGTACTGGAGAGTCCCTGCACGGAGGTaGGGCAGGACGGCCGCCAGCGTCAGGAGCCATATG | + |
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Preference number: 6 (lower is better) Translates to: ILGSYWRVPARR*GRTAASVRSHM Trigger: CATATGGCTCCTGACGCTGGCGGCCGTCCTGCCCAACCTCCGTGCAGGGACTCTCCAGTACGACCCGAGGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS TCA 72 bp | GGTTGGGCAGGACGGCCGCCAGCGTCAGGAGCCATATaGGGAGCACGTAGCAGAGGGAGTTCTTGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GWAGRPPASGAI*GARSRGSSCCC Trigger: ACAGCAGCAAGAACTCCCTCTGCTACGTGCTCCTCATATGGCTCCTGACGCTGGCGGCCGTCCTGCCCAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS TCA 72 bp | AGTGGAAAACCACCACGGCGATGGTGTAGGCGGAGCTaGCGGACTGGGCGAAGGTGCACGAGTAGATCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SGKPPRRWCRRS*RTGRRCTSRSS Trigger: CGAGGATCTACTCGTGCACCTTCGCCCAGTCCGTCAGCTCCGCCTACACCATCGCCGTGGTGGTTTTCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CAA 72 bp | TTCTTGTTCCGATACACCGACAGGATGACCAGGAGGTaGCCCAGGATGTCCACCACGATGGTGAAGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: FLFRYTDRMTRR*PRMSTTMVKMR Trigger: CCTCATCTTCACCATCGTGGTGGACATCCTGGGCAACCTCCTGGTCATCCTGTCGGTGTATCGGAACAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS TCA 72 bp | TCAGTTTGGGTTTGCGGTCAGGTTTCACCCTCTGTCTaGCCTGGAGAACCAGGATCCATATTCTCAGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: SVWVCGQVSPSV*PGEPGSIFSGN Trigger: GTTACCTGAGAATATGGATCCTGGTTCTCCAGGTCAGACAGAGGGTGAAACCTGACCGCAAACCCAAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CAA 90 bp | AACATGGTGACAAAATTCCTGAAGTCCTGTGGTTTCAGTTTGGGTTaGCGGTCAGGTTTCACCCTCTGTCTGACCTGGAGAACCAGGATC | + |
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Preference number: 6 (lower is better) Translates to: NMVTKFLKSCGFSLG*RSGFTLCLTWRTRI Trigger: GATCCTGGTTCTCCAGGTCAGACAGAGGGTGAAACCTGACCGCAAACCCAAACTGAAACCACAGGACTTCAGGAATTTTGTCACCATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CAA 90 bp | ACCACAAACATGGTGACAAAATTCCTGAAGTCCTGTGGTTTCAGTTaGGGTTTGCGGTCAGGTTTCACCCTCTGTCTGACCTGGAGAACC | + |
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Preference number: 6 (lower is better) Translates to: TTNMVTKFLKSCGFS*GLRSGFTLCLTWRT Trigger: GGTTCTCCAGGTCAGACAGAGGGTGAAACCTGACCGCAAACCCAAACTGAAACCACAGGACTTCAGGAATTTTGTCACCATGTTTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CAA 72 bp | ACAAAATTCCTGAAGTCCTGTGGTTTCAGTTTGGGTTaGCGGTCAGGTTTCACCCTCTGTCTGACCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: TKFLKSCGFSLG*RSGFTLCLTWR Trigger: TCTCCAGGTCAGACAGAGGGTGAAACCTGACCGCAAACCCAAACTGAAACCACAGGACTTCAGGAATTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CAA 72 bp | ATGGTGACAAAATTCCTGAAGTCCTGTGGTTTCAGTTaGGGTTTGCGGTCAGGTTTCACCCTCTGTCTGACC | + |
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Preference number: 6 (lower is better) Translates to: MVTKFLKSCGFS*GLRSGFTLCLT Trigger: GGTCAGACAGAGGGTGAAACCTGACCGCAAACCCAAACTGAAACCACAGGACTTCAGGAATTTTGTCACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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| CDS CCA 72 bp | GGAGTCCACCTTTACTACATTATTGTTGGTCATCAGTaGAGACGGTTTCCATTTAACCCTATCGGCCACGTC | + |
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Preference number: 6 (lower is better) Translates to: GVHLYYIIVGHQ*RRFPFNPIGHV Trigger: GACGTGGCCGATAGGGTTAAATGGAAACCGTCTCCACTGATGACCAACAATAATGTAGTAAAGGTGGACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307161.5 |
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