Pregenerated sensors for MTMR7 (Homo sapiens)
Ensembl gene IDs: ENSG00000003987Ensembl transcript IDs: ENST00000180173.10, ENST00000517317.5, ENST00000518272.5, ENST00000519122.5, ENST00000519590.5, ENST00000519763.1, ENST00000521177.1, ENST00000521857.5, ENST00000523571.1
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTAAATaGCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: ICGTEPQTRCVKCIK*LGLGFGYLSPDLDG Trigger: CCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTTAATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| 3UTR GCA 90 bp | CAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATaGATTAAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: QPKICGTEPQTRCVK*IKCLGLGFGYLSPD Trigger: GTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTTAATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| 3UTR TCA 90 bp | AATAGACAAATCAGTTTACATAAAGGTTATGTATGTCACCCACGATaGAAAGAATCTGCATTTGAATATGCCCGTATGAATGTGGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: NRQISLHKGYVCHPR*KESAFEYARMNVGS Trigger: AGAACCCACATTCATACGGGCATATTCAAATGCAGATTCTTTTCATCGTGGGTGACATACATAACCTTTATGTAAACTGATTTGTCTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| 3UTR-3UTR GCA 90 bp | TTTCCCTGCAGCACGATTTGCCATTGCATTAAGTTTAGGCCGGGTGTCAACGACCCCCACTATGATGTGTaGCGTGGCCGATTTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: FPCSTICHCIKFRPGVNDPHYDV*RGRFGN Trigger: GTTCCCAAATCGGCCACGGCACACATCATAGTGGGG...GTCGTTGACACCCGGCCTAAACTTAATGCAATGGCAAATCGTGCTGCAGGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| 3UTR-3UTR CCA 90 bp | ATAGCCTTTCCCTGCAGCACGATTTGCCATTGCATTAAGTTTAGGCCGGGTGTCGGCTGCTCCGGCAGATaGAGGCGTGGTTATCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: IAFPCSTICHCIKFRPGVGCSGR*RRGYLY Trigger: ATAAAGATAACCACGCCTCCATCTGCCGGAGCAGCC...GACACCCGGCCTAAACTTAATGCAATGGCAAATCGTGCTGCAGGGAAAGGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| 3UTR-3UTR GCA 90 bp | AAGTACAGGGAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCGTGAAATGCATTAAATaGCTAGGTTTGGGCTTCGGT | + |
|
Preference number: 2 (lower is better) Translates to: KYREVHRSQKIRLYSQSPVKCIK*LGLGFG Trigger: ACCGAAGCCCAAACCTAGGCATTTAATGCATTTCAC...GGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTCCCTGTACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| 3UTR-3UTR TCA 90 bp | AAGTACAGGGAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCAAAAATTTGTGGAACTaGGCCACAAACCAGATGTGT | + |
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Preference number: 2 (lower is better) Translates to: KYREVHRSQKIRLYSQSPKNLWN*ATNQMC Trigger: ACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTT...GGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTCCCTGTACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| 3UTR TCA 72 bp | CCTGGAGCATCTGCTCGTCCTCTAGGCACCGGGCACTaGAGCCGGACAGGGGCTGGCTGCTCCGGCAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: PGASARPLGTGH*SRTGAGCSGRW Trigger: CCATCTGCCGGAGCAGCCAGCCCCTGTCCGGCTTCAGTGCCCGGTGCCTAGAGGACGAGCAGATGCTCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| 3UTR CCA 72 bp | TCCTCTAGGCACCGGGCACTGAAGCCGGACAGGGGCTaGCTGCTCCGGCAGATGGAGGCGTGGTTATCTTTA | + |
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Preference number: 3 (lower is better) Translates to: SSRHRALKPDRG*LLRQMEAWLSL Trigger: TAAAGATAACCACGCCTCCATCTGCCGGAGCAGCCAGCCCCTGTCCGGCTTCAGTGCCCGGTGCCTAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| 3UTR TCA 72 bp | ATCGCCGTCTACTCCGGAATTTGGAACTCCCCACTATaGTGTGTGCCGTGGCCGATTTGGGAACGTACAGTT | + |
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Preference number: 3 (lower is better) Translates to: IAVYSGIWNSPL*CVPWPIWERTV Trigger: AACTGTACGTTCCCAAATCGGCCACGGCACACATCATAGTGGGGAGTTCCAAATTCCGGAGTAGACGGCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| 3UTR CCA 72 bp | AGGCCGGGTGTCAACGACATAAACGAAGTCACTTCCTaGATTGGCTTTCCTAATGGCCTGGAGCATCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: RPGVNDINEVTS*IGFPNGLEHLL Trigger: GAGCAGATGCTCCAGGCCATTAGGAAAGCCAATCCAGGAAGTGACTTCGTTTATGTCGTTGACACCCGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| 3UTR GCA 72 bp | TCTACTCCGGAATTTGGAACTCCCCACTATGATGTGTaGCGTGGCCGATTTGGGAACGTACAGTTCAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: STPEFGTPHYDV*RGRFGNVQFSR Trigger: CCTACTGAACTGTACGTTCCCAAATCGGCCACGGCACACATCATAGTGGGGAGTTCCAAATTCCGGAGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| 3UTR GCA 72 bp | GTCTTCATTCTCATAGCCTTTCCCTGCAGCACGATTTaGCATTGCATTAAGTTTAGGCCGGGTGTCAACGAC | + |
|
Preference number: 3 (lower is better) Translates to: VFILIAFPCSTI*HCIKFRPGVND Trigger: GTCGTTGACACCCGGCCTAAACTTAATGCAATGGCAAATCGTGCTGCAGGGAAAGGCTATGAGAATGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| 3UTR-3UTR CAA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAACTGACCTGGATGGGGTaGTGTTTCAGGTGTTCTACT | + |
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Preference number: 3 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQLTWMG*CFRCST Trigger: AGTAGAACACCTGAAACACAACCCCATCCAGGTCAG...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| 3UTR-3UTR CAA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAAATTAAATGCCTAGGTTaGGGCTTCGGTTATCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQIKCLG*GFGYLS Trigger: ACTCAGATAACCGAAGCCCAAACCTAGGCATTTAAT...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| 3UTR TCA 72 bp | ATCAGTTTACATAAAGGTTATGTATGTCACCCACGATaGAAAGAATCTGCATTTGAATATGCCCGTATGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ISLHKGYVCHPR*KESAFEYARMN Trigger: ATTCATACGGGCATATTCAAATGCAGATTCTTTTCATCGTGGGTGACATACATAACCTTTATGTAAACTGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS-3UTR TCA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGGCCACCGAGCACACCTaGGCGGTCCTGTCCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVATEHT*AVLSQP Trigger: TGGCTGGGACAGGACCGCTCAGGTGTGCTCGGTGGC...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR TCA 90 bp | GAAGCCGGACAGGGGCTGGCTGCTCCGGCAGATGGAGGCGTGGTTATCTTTATATGGAACTCCCCACTATaGTGTGTGCCGTGGCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: EAGQGLAAPADGGVVIFIWNSPL*CVPWPI Trigger: AATCGGCCACGGCACACATCATAGTGGGGAGTTCCA...TATAAAGATAACCACGCCTCCATCTGCCGGAGCAGCCAGCCCCTGTCCGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR GCA 90 bp | GAAGCCGGACAGGGGCTGGCTGCTCCGGCAGATGGAGGCGTGGTTATCTTTATACCCCACTATGATGTGTaGCGTGGCCGATTTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EAGQGLAAPADGGVVIFIPHYDV*RGRFGN Trigger: GTTCCCAAATCGGCCACGGCACACATCATAGTGGGG...TATAAAGATAACCACGCCTCCATCTGCCGGAGCAGCCAGCCCCTGTCCGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR GCA 90 bp | TTTCCCTGCAGCACGATTTGCCATTGCATTAAGTTTAGGCCGGGTGTCAACGACCGGACAGGGGCTGGCTaGTCCGGCAGATGGAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: FPCSTICHCIKFRPGVNDRTGAG*SGRWRR Trigger: ACGCCTCCATCTGCCGGAGCAGCCAGCCCCTGTCCG...GTCGTTGACACCCGGCCTAAACTTAATGCAATGGCAAATCGTGCTGCAGGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR TCA 90 bp | CATTGCATTAAGTTTAGGCCGGGTGTCAACGACATAAACGAAGTCACTTCCTGGCTAGGCACCGGGCACTaGAGCCGGACAGGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HCIKFRPGVNDINEVTSWLGTGH*SRTGAG Trigger: GCCAGCCCCTGTCCGGCTTCAGTGCCCGGTGCCTAG...CCAGGAAGTGACTTCGTTTATGTCGTTGACACCCGGCCTAAACTTAATGCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR GCA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGGTCCAGCAGCAGGCTTaGCACCGAGCACACCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVVQQQA*HRAHLS Trigger: GCTCAGGTGTGCTCGGTGGCAAGCCTGCTGCTGGAC...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR GCA 90 bp | TTTGGAACTCCCCACTATGATGTGTGCCGTGGCCGATTTGGGAACGTACAGTTCATGGCCTGGAGCATCTaGTCGTCCTCTAGGCACCGG | + |
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Preference number: 4 (lower is better) Translates to: FGTPHYDVCRGRFGNVQFMAWSI*SSSRHR Trigger: CCGGTGCCTAGAGGACGAGCAGATGCTCCAGGCCAT...GAACTGTACGTTCCCAAATCGGCCACGGCACACATCATAGTGGGGAGTTCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR CCA 90 bp | GAAGCCGGACAGGGGCTGGCTGCTCCGGCAGATGGAGGCGTGGTTATCTTTATAGGACATTTTCAACCTTaGGCGTACGGATGTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: EAGQGLAAPADGGVVIFIGHFQP*AYGCAP Trigger: TGGAGCACATCCGTACGCCCAAGGTTGAAAATGTCC...TATAAAGATAACCACGCCTCCATCTGCCGGAGCAGCCAGCCCCTGTCCGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR GCA 90 bp | ATAGCCTTTCCCTGCAGCACGATTTGCCATTGCATTAAGTTTAGGCCGGGTGTCTTGGGCGTACGGATGTaGTCCATGGCTGGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: IAFPCSTICHCIKFRPGVLGVRM*SMAGPR Trigger: ACGTGGGCCAGCCATGGAGCACATCCGTACGCCCAA...GACACCCGGCCTAAACTTAATGCAATGGCAAATCGTGCTGCAGGGAAAGGCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR CCA 90 bp | CATTGCATTAAGTTTAGGCCGGGTGTCAACGACATAAACGAAGTCACTTCCTGGAAGCCGGACAGGGGCTaGCTGCTCCGGCAGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: HCIKFRPGVNDINEVTSWKPDRG*LLRQME Trigger: CTCCATCTGCCGGAGCAGCCAGCCCCTGTCCGGCTT...CCAGGAAGTGACTTCGTTTATGTCGTTGACACCCGGCCTAAACTTAATGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR TCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTCTAGGCACCGGGCACTaGAGCCGGACAGGGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCILGTGH*SRTGAG Trigger: GCCAGCCCCTGTCCGGCTTCAGTGCCCGGTGCCTAG...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR TCA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGCAGCCATCAGAACAGTaGACAAGCACACTTGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVQPSEQ*TSTLAP Trigger: AGGGGCAAGTGTGCTTGTTCACTGTTCTGATGGCTG...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR GCA 90 bp | TTTGGAACTCCCCACTATGATGTGTGCCGTGGCCGATTTGGGAACGTACAGTTCTCACAGACCTGGCCTTaGAAGGCGTATCAGGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: FGTPHYDVCRGRFGNVQFSQTWP*KAYQGD Trigger: ATCTCCCTGATACGCCTTGCAAGGCCAGGTCTGTGA...GAACTGTACGTTCCCAAATCGGCCACGGCACACATCATAGTGGGGAGTTCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR TCA 90 bp | GAAGCCGGACAGGGGCTGGCTGCTCCGGCAGATGGAGGCGTGGTTATCTTTATATTTTCTTGGGTCAGGTaGATTTTCCACGAATATGAC | + |
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Preference number: 4 (lower is better) Translates to: EAGQGLAAPADGGVVIFIFSWVR*IFHEYD Trigger: GTCATATTCGTGGAAAATTCACCTGACCCAAGAAAA...TATAAAGATAACCACGCCTCCATCTGCCGGAGCAGCCAGCCCCTGTCCGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR TCA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGTCTTCCTCTAGCTGCTaGGTTTCTTCCTTCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVSSSSC*VSSFTA Trigger: GGCAGTGAAGGAAGAAACTCAGCAGCTAGAGGAAGA...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR GCA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGTCCGGTAGCGGTTGTTaGCTGTTTCTCAATGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVSGSGC*LFLNGG Trigger: TCCACCATTGAGAAACAGGCAACAACCGCTACCGGA...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTCGGACAGGGGCTGGCTaGTCCGGCAGATGGAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCIRTGAG*SGRWRR Trigger: ACGCCTCCATCTGCCGGAGCAGCCAGCCCCTGTCCG...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR GCA 90 bp | CTCCGGAATTTGGAACTCCCCACTATGATGTGTGCCGTGGCCGATTTGGGAACGCCCTGCAGCACGATTTaGCATTGCATTAAGTTTAGG | + |
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Preference number: 4 (lower is better) Translates to: LRNLELPTMMCAVADLGTPCSTI*HCIKFR Trigger: CCTAAACTTAATGCAATGGCAAATCGTGCTGCAGGG...CGTTCCCAAATCGGCCACGGCACACATCATAGTGGGGAGTTCCAAATTCCGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR CCA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGGGACATTTTCAACCTTaGGCGTACGGATGTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVGHFQP*AYGCAP Trigger: TGGAGCACATCCGTACGCCCAAGGTTGAAAATGTCC...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR CCA 90 bp | AAGTACAGGGAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCAAGCCGGACAGGGGCTaGCTGCTCCGGCAGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: KYREVHRSQKIRLYSQSPKPDRG*LLRQME Trigger: CTCCATCTGCCGGAGCAGCCAGCCCCTGTCCGGCTT...GGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTCCCTGTACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR CCA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGCTCCTCATATTTCACTaGCCTTGCAAGGCGTATCAG | + |
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Preference number: 4 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVLLIFH*PCKAYQ Trigger: CTGATACGCCTTGCAAGGCCAGTGAAATATGAGGAG...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR GCA 90 bp | AAGTACAGGGAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCTTGGGCGTACGGATGTaGTCCATGGCTGGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: KYREVHRSQKIRLYSQSPLGVRM*SMAGPR Trigger: ACGTGGGCCAGCCATGGAGCACATCCGTACGCCCAA...GGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTCCCTGTACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR GCA 90 bp | GCTGCTCCGGCAGATGGAGGCGTGGTTATCTTTATAATAGTAAGAAAGGACAGGTCCGGTAGCGGTTGTTaGCTGTTTCTCAATGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: AAPADGGVVIFIIVRKDRSGSGC*LFLNGG Trigger: TCCACCATTGAGAAACAGGCAACAACCGCTACCGGA...CCTGTCCTTTCTTACTATTATAAAGATAACCACGCCTCCATCTGCCGGAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR GCA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGATCAGCACCCAGCCTTaGTCTCTTTCTTCTTTATCC | + |
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Preference number: 4 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVISTQP*SLSSLS Trigger: GGATAAAGAAGAAAGAGAGCAAGGCTGGGTGCTGAT...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR GCA 90 bp | ATAGTAAGAAAGGACAGGAAATCGCCGTCTACTCCGGAATTTGGAACTCCCCACCTCATAGCCTTTCCCTaGAGCACGATTTGCCATTGC | + |
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Preference number: 4 (lower is better) Translates to: IVRKDRKSPSTPEFGTPHLIAFP*STICHC Trigger: GCAATGGCAAATCGTGCTGCAGGGAAAGGCTATGAG...GTGGGGAGTTCCAAATTCCGGAGTAGACGGCGATTTCCTGTCCTTTCTTACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR CCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTGATGTGCTCCATGGCTaGCCCACGTCTGCAGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCIDVLHG*PTSAGS Trigger: GGACCCTGCAGACGTGGGCCAGCCATGGAGCACATC...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR CCA 90 bp | CTCCGGAATTTGGAACTCCCCACTATGATGTGTGCCGTGGCCGATTTGGGAACGTCCACGAATATGACATaGGTAGCCGTCAAATACAAA | + |
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Preference number: 4 (lower is better) Translates to: LRNLELPTMMCAVADLGTSTNMT*VAVKYK Trigger: TTTGTATTTGACGGCTACCCATGTCATATTCGTGGA...CGTTCCCAAATCGGCCACGGCACACATCATAGTGGGGAGTTCCAAATTCCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR CCA 90 bp | CATTGCATTAAGTTTAGGCCGGGTGTCAACGACATAAACGAAGTCACTTCCTGGGCTTTCCTAATGGCCTaGAGCATCTGCTCGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: HCIKFRPGVNDINEVTSWAFLMA*SICSSS Trigger: AGAGGACGAGCAGATGCTCCAGGCCATTAGGAAAGC...CCAGGAAGTGACTTCGTTTATGTCGTTGACACCCGGCCTAAACTTAATGCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR TCA 90 bp | AAATCGCCGTCTACTCCGGAATTTGGAACTCCCCACTATGATGTGTGCCGTGGCATGAGCTGTATTATCTaGAAGTTCTTGCAGCGAATC | + |
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Preference number: 4 (lower is better) Translates to: KSPSTPEFGTPHYDVCRGMSCII*KFLQRI Trigger: GATTCGCTGCAAGAACTTTCAGATAATACAGCTCAT...GCCACGGCACACATCATAGTGGGGAGTTCCAAATTCCGGAGTAGACGGCGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTATGGCCTGGAGCATCTaGTCGTCCTCTAGGCACCGG | + |
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Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCIMAWSI*SSSRHR Trigger: CCGGTGCCTAGAGGACGAGCAGATGCTCCAGGCCAT...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR CCA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAATACGGATGTGCTCCATaGCTGGCCCACGTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQYGCAP*LAHVCR Trigger: CCTGCAGACGTGGGCCAGCCATGGAGCACATCCGTA...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR CCA 90 bp | TTTCCCTGCAGCACGATTTGCCATTGCATTAAGTTTAGGCCGGGTGTCAACGACAACGAAGTCACTTCCTaGATTGGCTTTCCTAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPCSTICHCIKFRPGVNDNEVTS*IGFPNG Trigger: GCCATTAGGAAAGCCAATCCAGGAAGTGACTTCGTT...GTCGTTGACACCCGGCCTAAACTTAATGCAATGGCAAATCGTGCTGCAGGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517317.5 |
||
| CDS-3UTR TCA 90 bp | TTTCCCTGCAGCACGATTTGCCATTGCATTAAGTTTAGGCCGGGTGTCAACGACTGGCAATCTCTTTCCTaGGGTATGATGAGCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: FPCSTICHCIKFRPGVNDWQSLS*GMMSCI Trigger: AATACAGCTCATCATACCTCAGGAAAGAGATTGCCA...GTCGTTGACACCCGGCCTAAACTTAATGCAATGGCAAATCGTGCTGCAGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517317.5 |
||
| CDS-3UTR TCA 90 bp | AAGTACAGGGAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCTGGAACTCCCCACTATaGTGTGTGCCGTGGCCGATT | + |
|
Preference number: 4 (lower is better) Translates to: KYREVHRSQKIRLYSQSPWNSPL*CVPWPI Trigger: AATCGGCCACGGCACACATCATAGTGGGGAGTTCCA...GGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTCCCTGTACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR TCA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAATGGGCTTCGGTTATCTaGGTCCTGACCTGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQWASVI*VLTWMG Trigger: CCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCA...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR GCA 90 bp | GTAAGAAAGGACAGGAAATCGCCGTCTACTCCGGAATTTGGAACTCCCCACTATAGCACGATTTGCCATTaGATTAAGTTTAGGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRKDRKSPSTPEFGTPHYSTICH*IKFRPG Trigger: ACCCGGCCTAAACTTAATGCAATGGCAAATCGTGCT...ATAGTGGGGAGTTCCAAATTCCGGAGTAGACGGCGATTTCCTGTCCTTTCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
||
| CDS-3UTR GCA 90 bp | ATAGCCTTTCCCTGCAGCACGATTTGCCATTGCATTAAGTTTAGGCCGGGTGTCACTTCCAGCATTTTCTaGAGACTGTTCCTCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: IAFPCSTICHCIKFRPGVTSSIF*RLFLMT Trigger: TGTCATGAGGAACAGTCTGCAGAAAATGCTGGAAGT...GACACCCGGCCTAAACTTAATGCAATGGCAAATCGTGCTGCAGGGAAAGGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
||
| 3UTR CAA 72 bp | CAAACCAGATGTGTGAAATGCATTAAATGCCTAGGTTaGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTRCVKCIKCLG*GFGYLSPDLDG Trigger: CCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTTAATGCATTTCACACATCTGGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR TCA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGTTCTTTCTTGAATCTTaGGTTCTCGTCTCTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVFFLES*VLVSPF Trigger: AAAAGGAGAGACGAGAACTCAAGATTCAAGAAAGAA...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR TCA 90 bp | AAGTACAGGGAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCGGTTATCTGAGTCCTaGCCTGGATGGGGTTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KYREVHRSQKIRLYSQSPRLSES*PGWGCV Trigger: AACACAACCCCATCCAGGTCAGGACTCAGATAACCG...GGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTCCCTGTACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR GCA 90 bp | CATTGCATTAAGTTTAGGCCGGGTGTCAACGACATAAACGAAGTCACTTCCTGGTTATCTGAAAGTTCTTaGAGCGAATCAGCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HCIKFRPGVNDINEVTSWLSESS*SESAEG Trigger: GCCCTCTGCTGATTCGCTGCAAGAACTTTCAGATAA...CCAGGAAGTGACTTCGTTTATGTCGTTGACACCCGGCCTAAACTTAATGCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517317.5 |
||
| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTCCCCACTATGATGTGTaGCGTGGCCGATTTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCIPHYDV*RGRFGN Trigger: GTTCCCAAATCGGCCACGGCACACATCATAGTGGGG...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR CCA 90 bp | TTTATAATAGTAAGAAAGGACAGGAAATCGCCGTCTACTCCGGAATTTGGAACTGGCTGCTCCGGCAGATaGAGGCGTGGTTATCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FIIVRKDRKSPSTPEFGTGCSGR*RRGYLY Trigger: ATAAAGATAACCACGCCTCCATCTGCCGGAGCAGCC...AGTTCCAAATTCCGGAGTAGACGGCGATTTCCTGTCCTTTCTTACTATTATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517317.5 |
||
| CDS-3UTR CCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTGGCTGCTCCGGCAGATaGAGGCGTGGTTATCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCIGCSGR*RRGYLY Trigger: ATAAAGATAACCACGCCTCCATCTGCCGGAGCAGCC...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR CCA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAAGCTTTCCTAATGGCCTaGAGCATCTGCTCGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQAFLMA*SICSSS Trigger: AGAGGACGAGCAGATGCTCCAGGCCATTAGGAAAGC...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR TCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTACTTGCCCCTTCCTCTaGCACTGCCTTTGCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCITCPFL*HCLCNE Trigger: TTCATTGCAAAGGCAGTGTCAGAGGAAGGGGCAAGT...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTCTCATAGCCTTTCCCTaGAGCACGATTTGCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCILIAFP*STICHC Trigger: GCAATGGCAAATCGTGCTGCAGGGAAAGGCTATGAG...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR CCA 90 bp | TGCCATTGCATTAAGTTTAGGCCGGGTGTCAACGACATAAACGAAGTCACTTCCTTGCCTGTTTCTCAATaGTGGAAATCTGACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CHCIKFRPGVNDINEVTSLPVSQ*WKSDCE Trigger: TTCACAGTCAGATTTCCACCATTGAGAAACAGGCAA...GGAAGTGACTTCGTTTATGTCGTTGACACCCGGCCTAAACTTAATGCAATGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517317.5 |
||
| CDS-3UTR TCA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAACGATTCTTCCACAGGTaGGCCCATAATGAGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQRFFHR*AHNEYV Trigger: AACATACTCATTATGGGCTCACCTGTGGAAGAATCG...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTATATTTCACTGGCCTTaGAAGGCGTATCAGGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCIIFHWP*KAYQGD Trigger: ATCTCCCTGATACGCCTTGCAAGGCCAGTGAAATAT...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTAGCACGATTTGCCATTaGATTAAGTTTAGGCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCISTICH*IKFRPG Trigger: ACCCGGCCTAAACTTAATGCAATGGCAAATCGTGCT...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTCCCTGCAGCACGATTTaGCATTGCATTAAGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCIPCSTI*HCIKFR Trigger: CCTAAACTTAATGCAATGGCAAATCGTGCTGCAGGG...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR CCA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAAAACGAAGTCACTTCCTaGATTGGCTTTCCTAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQNEVTS*IGFPNG Trigger: GCCATTAGGAAAGCCAATCCAGGAAGTGACTTCGTT...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR TCA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAAACACTGCCTTTGCAATaGAGATTCCTGCATCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQTLPLQ*RFLHPL Trigger: TAATGGATGCAGGAATCTTCATTGCAAAGGCAGTGT...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR TCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTTTTCAATTAATACCATaGAGCCCTTCAGAGTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCIFQLIP*SPSESG Trigger: ACCGGACTCTGAAGGGCTTCATGGTATTAATTGAAA...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR TCA 90 bp | AAGTACAGGGAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCGAGTATGTTCTTTCTTaGATCTTGAGTTCTCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KYREVHRSQKIRLYSQSPEYVLS*ILSSRL Trigger: GAGACGAGAACTCAAGATTCAAGAAAGAACATACTC...GGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTCCCTGTACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTACTTCCAGCATTTTCTaGAGACTGTTCCTCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCITSSIF*RLFLMT Trigger: TGTCATGAGGAACAGTCTGCAGAAAATGCTGGAAGT...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTGTGAAATGCATTAAATaGCTAGGTTTGGGCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCIVKCIK*LGLGFG Trigger: ACCGAAGCCCAAACCTAGGCATTTAATGCATTTCAC...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR CCA 90 bp | AAGTACAGGGAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCGAACTGGTCAATAACTaGAGAGATTTCTTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KYREVHRSQKIRLYSQSPELVNN*RDFFWV Trigger: GACCCAAAAGAAATCTCTCCAGTTATTGACCAGTTC...GGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTCCCTGTACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR TCA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAATTTTCTTGGGTCAGGTaGATTTTCCACGAATATGAC | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQFSWVR*IFHEYD Trigger: GTCATATTCGTGGAAAATTCACCTGACCCAAGAAAA...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR TCA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAAATGAGCTGTATTATCTaGAAGTTCTTGCAGCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQMSCII*KFLQRI Trigger: GATTCGCTGCAAGAACTTTCAGATAATACAGCTCAT...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR TCA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAATATCCAGCATGGGGTTaGATGAAAAGCAGTATAACT | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQYPAWG*MKSSIT Trigger: AGTTATACTGCTTTTCATTCAACCCCATGCTGGATA...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR TCA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAAAAAAATTTGTGGAACTaGGCCACAAACCAGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQKNLWN*ATNQMC Trigger: ACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTT...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTATTATGGCTTTAATGTaGCTTAACCAGCCAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCIIMALM*LNQPEF Trigger: GAACTCTGGCTGGTTAAGGCACATTAAAGCCATAAT...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR CCA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAATTGCCTGTTTCTCAATaGTGGAAATCTGACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQLPVSQ*WKSDCE Trigger: TTCACAGTCAGATTTCCACCATTGAGAAACAGGCAA...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR CCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTGTACATGAAGTTACATaGTGTTGTAGGGAGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCIVHEVT*CCREMK Trigger: CTTCATCTCCCTACAACACCATGTAACTTCATGTAC...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| 3UTR CAA 72 bp | ATCCCAGTTTCATTCTATACCATTCATTGGATAACCTaGTTACAACCCAGTCATGAAACAGAGCAGTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPVSFYTIHWIT*LQPSHETEQCD Trigger: ATCACACTGCTCTGTTTCATGACTGGGTTGTAACAAGGTTATCCAATGAATGGTATAGAATGAAACTGGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180173.10 |
||
| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTTGCAATGAAGATTCCTaGATCCATTATGGCTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCICNEDS*IHYGFN Trigger: ATTAAAGCCATAATGGATGCAGGAATCTTCATTGCA...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR GCA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTAATTGTTCCATTAACTaGCAAACACACTCAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EQPKICGTEPQTRCVKCINCSIN*QTHSMN Trigger: GTTCATTGAGTGTGTTTGGCAGTTAATGGAACAATT...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS GCA 90 bp | TTTCAACCTTGGGCGTACGGATGTGCTCCATGGCTGGCCCACGTCTaGAGGGTCCCGGGCGGGCGCGGCCTCACGCACCTGCGCGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FQPWAYGCAPWLAHV*RVPGGRGLTHLRAS Trigger: AGAGGCGCGCAGGTGCGTGAGGCCGCGCCCGCCCGGGACCCTGCAGACGTGGGCCAGCCATGGAGCACATCCGTACGCCCAAGGTTGAAA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000180173.10 ENST00000521177.1 |
||
| CDS CCA 90 bp | CAAGCGGACATTTTCAACCTTGGGCGTACGGATGTGCTCCATGGCTaGCCCACGTCTGCAGGGTCCCGGGCGGGCGCGGCCTCACGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QADIFNLGRTDVLHG*PTSAGSRAGAASRT Trigger: GGTGCGTGAGGCCGCGCCCGCCCGGGACCCTGCAGACGTGGGCCAGCCATGGAGCACATCCGTACGCCCAAGGTTGAAAATGTCCGCTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180173.10 ENST00000521177.1 |
||
| CDS CCA 90 bp | CTACCAAGCGGACATTTTCAACCTTGGGCGTACGGATGTGCTCCATaGCTGGCCCACGTCTGCAGGGTCCCGGGCGGGCGCGGCCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: LPSGHFQPWAYGCAP*LAHVCRVPGGRGLT Trigger: CGTGAGGCCGCGCCCGCCCGGGACCCTGCAGACGTGGGCCAGCCATGGAGCACATCCGTACGCCCAAGGTTGAAAATGTCCGCTTGGTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180173.10 ENST00000521177.1 |
||
| CDS CCA 90 bp | ATCTGCTCGTCCTCTAGGCACCGGGCACTGAAGCCGGACAGGGGCTaGCTGCTCCGGCAGATGGAGGCCTGTTTACTTTTTGTGGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ICSSSRHRALKPDRG*LLRQMEACLLFVGD Trigger: GTCTCCCACAAAAAGTAAACAGGCCTCCATCTGCCGGAGCAGCCAGCCCCTGTCCGGCTTCAGTGCCCGGTGCCTAGAGGACGAGCAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518272.5 |
||
| CDS CCA 90 bp | CCGGTCCTTGCCACTATCTTCACTCGGTGCATGCTCACCACCACTTaGAGACCGACAGCTCAAATCCTCCACCCCGGACTCTTGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PVLATIFTRCMLTTT*RPTAQILHPGLLVT Trigger: AGTGACCAAGAGTCCGGGGTGGAGGATTTGAGCTGTCGGTCTCCAAGTGGTGGTGAGCATGCACCGAGTGAAGATAGTGGCAAGGACCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180173.10 |
||
| CDS-3UTR CAA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGGGTCCAGCAGCAGGCTaGCCACCGAGCACACCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVGPAAG*PPSTPE Trigger: CTCAGGTGTGCTCGGTGGCAAGCCTGCTGCTGGACC...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS GCA 90 bp | GCTTCATCAGAATCCCGGTCCTTGCCACTATCTTCACTCGGTGCATaGTCACCACCACTTGGAGACCGACAGCTCAAATCCTCCACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASSESRSLPLSSLGA*SPPLGDRQLKSSTP Trigger: CGGGGTGGAGGATTTGAGCTGTCGGTCTCCAAGTGGTGGTGAGCATGCACCGAGTGAAGATAGTGGCAAGGACCGGGATTCTGATGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180173.10 |
||
| CDS GCA 90 bp | CACGGCTTCATCAGAATCCCGGTCCTTGCCACTATCTTCACTCGGTaGATGCTCACCACCACTTGGAGACCGACAGCTCAAATCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HGFIRIPVLATIFTR*MLTTTWRPTAQILH Trigger: GTGGAGGATTTGAGCTGTCGGTCTCCAAGTGGTGGTGAGCATGCACCGAGTGAAGATAGTGGCAAGGACCGGGATTCTGATGAAGCCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS-3UTR CAA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGCGGACATTTTCAACCTaGGGCGTACGGATGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVRTFST*GVRMCS Trigger: GGAGCACATCCGTACGCCCAAGGTTGAAAATGTCCG...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR CAA 90 bp | AAGGACAGGAAATCGCCGTCTACTCCGGAATTTGGAACTCCCCACTATGATGTGCGGACATTTTCAACCTaGGGCGTACGGATGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KDRKSPSTPEFGTPHYDVRTFST*GVRMCS Trigger: GGAGCACATCCGTACGCCCAAGGTTGAAAATGTCCG...CACATCATAGTGGGGAGTTCCAAATTCCGGAGTAGACGGCGATTTCCTGTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517317.5 |
||
| CDS TCA 90 bp | GTTTCATCACTGATCTCCAGGACTGATTCGCTCATCTGGCATCCGTaGGTAGTAACTCCACACACTTCTCTCCCGCTGTGTGCTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSSLISRTDSLIWHP*VVTPHTSLPLCALL Trigger: GAGCAAAGCACACAGCGGGAGAGAAGTGTGTGGAGTTACTACTCACGGATGCCAGATGAGCGAATCAGTCCTGGAGATCAGTGATGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523571.1 |
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| CDS-3UTR CAA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGCGTCTACTCCGGAATTaGGAACTCCCCACTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVRLLRN*ELPTMM Trigger: CATCATAGTGGGGAGTTCCAAATTCCGGAGTAGACG...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS GCA 90 bp | AAATCGCCGTCTACTCCGGAATTTGGAACTCCCCACTATGATGTGTaGCGTGGCCGATTTGGGAACGTACAGTTCAGTAGGATAAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSPSTPEFGTPHYDV*RGRFGNVQFSRIRV Trigger: GACTCTTATCCTACTGAACTGTACGTTCCCAAATCGGCCACGGCACACATCATAGTGGGGAGTTCCAAATTCCGGAGTAGACGGCGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000180173.10 ENST00000517317.5 ENST00000518272.5 ENST00000521857.5 ENST00000523571.1 |
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| CDS CCA 90 bp | GAGACCGACAGCTCAAATCCTCCACCCCGGACTCTTGGTCACTGTTaGCTGACAGATCTGGATCTGAACTTTTCAGATTGTCTTGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ETDSSNPPPRTLGHC*LTDLDLNFSDCLGL Trigger: TAACCCAAGACAATCTGAAAAGTTCAGATCCAGATCTGTCAGCCAACAGTGACCAAGAGTCCGGGGTGGAGGATTTGAGCTGTCGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS-3UTR CAA 90 bp | GTAAGAAAGGACAGGAAATCGCCGTCTACTCCGGAATTTGGAACTCCCCACTATTGTGCCGTGGCCGATTaGGGAACGTACAGTTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VRKDRKSPSTPEFGTPHYCAVAD*GTYSSV Trigger: TACTGAACTGTACGTTCCCAAATCGGCCACGGCACA...ATAGTGGGGAGTTCCAAATTCCGGAGTAGACGGCGATTTCCTGTCCTTTCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
||
| CDS GCA 90 bp | AAAGTTCTTGCAGCGAATCAGCAGAGGGCATCCGGTAGCGGTTGTTaGCTGTTTCTCAATGGTGGAAATCTGACTGTGAAGAATCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: KVLAANQQRASGSGC*LFLNGGNLTVKNPC Trigger: ACATGGATTCTTCACAGTCAGATTTCCACCATTGAGAAACAGGCAACAACCGCTACCGGATGCCCTCTGCTGATTCGCTGCAAGAACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000180173.10 ENST00000517317.5 ENST00000521857.5 |
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| CDS GCA 90 bp | CCCATCCGCGTGTATTCTTCACTAAGATCGATCAGCACCCAGCCTTaGTCTCTTTCTTCTTTATCCAGCATGGGGTTGAATGAAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PIRVYSSLRSISTQP*SLSSLSSMGLNEKQ Trigger: CTGCTTTTCATTCAACCCCATGCTGGATAAAGAAGAAAGAGAGCAAGGCTGGGTGCTGATCGATCTTAGTGAAGAATACACGCGGATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000180173.10 ENST00000521857.5 |
||
| CDS-3UTR CAA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGATCAAAAACCTCTCATaGAACTCAAAGGCACAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVIKNLS*NSKAQG Trigger: TCCCTGTGCCTTTGAGTTCAATGAGAGGTTTTTGAT...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS GCA 90 bp | ACTGCCTTTGCAATGAAGATTCCTGCATCCATTATGGCTTTAATGTaGCTTAACCAGCCAGAGTTCTCCAGACCCCACAGGAAATCACTC | + |
|
Preference number: 5 (lower is better) Translates to: TAFAMKIPASIMALM*LNQPEFSRPHRKSL Trigger: GAGTGATTTCCTGTGGGGTCTGGAGAACTCTGGCTGGTTAAGGCACATTAAAGCCATAATGGATGCAGGAATCTTCATTGCAAAGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180173.10 ENST00000521857.5 |
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| CDS-3UTR CAA 90 bp | GGCAGATGGAGGCGTGGTTATCTTTATAATAGTAAGAAAGGACAGGAAATCGCCCGTCTACTCCGGAATTaGGAACTCCCCACTATGATG | + |
|
Preference number: 5 (lower is better) Translates to: GRWRRGYLYNSKKGQEIARLLRN*ELPTMM Trigger: CATCATAGTGGGGAGTTCCAAATTCCGGAGTAGACG...GGCGATTTCCTGTCCTTTCTTACTATTATAAAGATAACCACGCCTCCATCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517317.5 |
||
| CDS CCA 90 bp | TCACTGTTGGCTGACAGATCTGGATCTGAACTTTTCAGATTGTCTTaGGTTAGAATCAGAGCAGAATCTTCATCGCCTTGTGAAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLADRSGSELFRLS*VRIRAESSSPCEGL Trigger: GAGCCCTTCACAAGGCGATGAAGATTCTGCTCTGATTCTAACCCAAGACAATCTGAAAAGTTCAGATCCAGATCTGTCAGCCAACAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180173.10 |
||
| CDS-3UTR CAA 90 bp | AAGGACAGGAAATCGCCGTCTACTCCGGAATTTGGAACTCCCCACTATGATGTGTCCATGTTTCTTTTCTaGGGTCAGGTGAATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KDRKSPSTPEFGTPHYDVSMFLF*GQVNFP Trigger: TGGAAAATTCACCTGACCCAAGAAAAGAAACATGGA...CACATCATAGTGGGGAGTTCCAAATTCCGGAGTAGACGGCGATTTCCTGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000517317.5 |
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| CDS-3UTR CAA 90 bp | AAATGCCTAGGTTTGGGCTTCGGTTATCTGAGTCCTGACCTGGATGGGGTTGTGATTCCACTCCAAAACTaGTACATGAAGTTACATGGT | + |
|
Preference number: 5 (lower is better) Translates to: KCLGLGFGYLSPDLDGVVIPLQN*YMKLHG Trigger: ACCATGTAACTTCATGTACAAGTTTTGGAGTGGAAT...CACAACCCCATCCAGGTCAGGACTCAGATAACCGAAGCCCAAACCTAGGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS TCA 90 bp | TCAGCACCCAGCCTTGCTCTCTTTCTTCTTTATCCAGCATGGGGTTaGATGAAAAGCAGTATAACTCCTCATATTTCACTGGCCTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SAPSLALFLLYPAWG*MKSSITPHISLALQ Trigger: TTGCAAGGCCAGTGAAATATGAGGAGTTATACTGCTTTTCATTCAACCCCATGCTGGATAAAGAAGAAAGAGAGCAAGGCTGGGTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000180173.10 ENST00000521857.5 |
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| CDS-3UTR CAA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAATGTGCCGTGGCCGATTaGGGAACGTACAGTTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQCAVAD*GTYSSV Trigger: TACTGAACTGTACGTTCCCAAATCGGCCACGGCACA...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS-3UTR CAA 90 bp | AAGTACAGGGAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTGACCTGGATGGGGTaGTGTTTCAGGTGTTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: KYREVHRSQKIRLYSQSPLTWMG*CFRCST Trigger: AGTAGAACACCTGAAACACAACCCCATCCAGGTCAG...GGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTCCCTGTACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR CAA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTCATATTTCACTGGCCTaGCAAGGCGTATCAGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EQPKICGTEPQTRCVKCIHISLA*QGVSGR Trigger: TCTCCCTGATACGCCTTGCAAGGCCAGTGAAATATG...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS TCA 90 bp | GTTTACTTTTTGTGGGAGACTGCCTGTTTTCTATACGGCCATCGATaGGCAATGACAGCACAGATAACTACTCTGGTATTTCAGTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VYFLWETACFLYGHR*AMTAQITTLVFQCL Trigger: AAGACACTGAAATACCAGAGTAGTTATCTGTGCTGTCATTGCTCATCGATGGCCGTATAGAAAACAGGCAGTCTCCCACAAAAAGTAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518272.5 |
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| CDS-3UTR CAA 90 bp | GAACAACCAAAAATTTGTGGAACTGAGCCACAAACCAGATGTGTGAAATGCATTCTGGAGAGATTTCTTTaGGGTCACCATCTAGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: EQPKICGTEPQTRCVKCILERFL*GHHLDC Trigger: GCAATCTAGATGGTGACCCAAAAGAAATCTCTCCAG...AATGCATTTCACACATCTGGTTTGTGGCTCAGTTCCACAAATTTTTGGTTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521857.5 |
||
| CDS-3UTR CAA 90 bp | AAGTACAGGGAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCATTAAATGCCTAGGTTaGGGCTTCGGTTATCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KYREVHRSQKIRLYSQSPIKCLG*GFGYLS Trigger: ACTCAGATAACCGAAGCCCAAACCTAGGCATTTAAT...GGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTCCCTGTACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS TCA 90 bp | GGAAATCTGACTGTGAAGAATCCATGTTTCTTTTCTTGGGTCAGGTaGATTTTCCACGAATATGACATGGGTAGCCGTCAAATACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GNLTVKNPCFFSWVR*IFHEYDMGSRQIQS Trigger: ACTTTGTATTTGACGGCTACCCATGTCATATTCGTGGAAAATTCACCTGACCCAAGAAAAGAAACATGGATTCTTCACAGTCAGATTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000180173.10 ENST00000517317.5 ENST00000521857.5 |
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| CDS-3UTR CAA 90 bp | GAAGTTCATAGAAGCCAAAAGATAAGACTTTACAGTCAGTCTCCCCTTTACCAATCCATGTTTCTTTTCTaGGGTCAGGTGAATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EVHRSQKIRLYSQSPLYQSMFLF*GQVNFP Trigger: TGGAAAATTCACCTGACCCAAGAAAAGAAACATGGA...TTGGTAAAGGGGAGACTGACTGTAAAGTCTTATCTTTTGGCTTCTATGAACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000521857.5 |
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| CDS CCA 72 bp | ATTTTCAACCTTGGGCGTACGGATGTGCTCCATGGCTaGCCCACGTCTGCAGGGTCCCGGGCGGGCGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: IFNLGRTDVLHG*PTSAGSRAGAA Trigger: GGCCGCGCCCGCCCGGGACCCTGCAGACGTGGGCCAGCCATGGAGCACATCCGTACGCCCAAGGTTGAAAAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180173.10 ENST00000521177.1 |
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| CDS CCA 72 bp | GGACATTTTCAACCTTGGGCGTACGGATGTGCTCCATaGCTGGCCCACGTCTGCAGGGTCCCGGGCGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GHFQPWAYGCAP*LAHVCRVPGGR Trigger: GCGCCCGCCCGGGACCCTGCAGACGTGGGCCAGCCATGGAGCACATCCGTACGCCCAAGGTTGAAAATGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000180173.10 ENST00000521177.1 ENST00000521857.5 |
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| CDS GCA 72 bp | CTTCAGAGTCCGGTAGTGAGGGTCCAGCAGCAGGCTTaGCACCGAGCACACCTGAGCGGTCCTGTCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LQSPVVRVQQQA*HRAHLSGPVPA Trigger: GGCTGGGACAGGACCGCTCAGGTGTGCTCGGTGGCAAGCCTGCTGCTGGACCCTCACTACCGGACTCTGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000180173.10 ENST00000519590.5 ENST00000519763.1 ENST00000521857.5 |
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| CDS CAA 72 bp | CCTTCAGAGTCCGGTAGTGAGGGTCCAGCAGCAGGCTaGCCACCGAGCACACCTGAGCGGTCCTGTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSESGSEGPAAG*PPSTPERSCPS Trigger: GCTGGGACAGGACCGCTCAGGTGTGCTCGGTGGCAAGCCTGCTGCTGGACCCTCACTACCGGACTCTGAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000180173.10 ENST00000519590.5 ENST00000519763.1 ENST00000521857.5 |
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| CDS GCA 72 bp | ACCAAGCGGACATTTTCAACCTTGGGCGTACGGATGTaGTCCATGGCTGGCCCACGTCTGCAGGGTCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TKRTFSTLGVRM*SMAGPRLQGPG Trigger: CCCGGGACCCTGCAGACGTGGGCCAGCCATGGAGCACATCCGTACGCCCAAGGTTGAAAATGTCCGCTTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000180173.10 ENST00000521177.1 ENST00000521857.5 |
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| CDS CCA 72 bp | TCCTCTAGGCACCGGGCACTGAAGCCGGACAGGGGCTaGCTGCTCCGGCAGATGGAGGCCTGTTTACTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSRHRALKPDRG*LLRQMEACLLF Trigger: AAAAAGTAAACAGGCCTCCATCTGCCGGAGCAGCCAGCCCCTGTCCGGCTTCAGTGCCCGGTGCCTAGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518272.5 |
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| CDS CAA 90 bp | CCCGGTCCTTGCCACTATCTTCACTCGGTGCATGCTCACCACCACTaGGAGACCGACAGCTCAAATCCTCCACCCCGGACTCTTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGPCHYLHSVHAHHH*ETDSSNPPPRTLGH Trigger: GTGACCAAGAGTCCGGGGTGGAGGATTTGAGCTGTCGGTCTCCAAGTGGTGGTGAGCATGCACCGAGTGAAGATAGTGGCAAGGACCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS CCA 72 bp | GCCACTATCTTCACTCGGTGCATGCTCACCACCACTTaGAGACCGACAGCTCAAATCCTCCACCCCGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: ATIFTRCMLTTT*RPTAQILHPGL Trigger: GAGTCCGGGGTGGAGGATTTGAGCTGTCGGTCTCCAAGTGGTGGTGAGCATGCACCGAGTGAAGATAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS CAA 72 bp | TGCCACTATCTTCACTCGGTGCATGCTCACCACCACTaGGAGACCGACAGCTCAAATCCTCCACCCCGGACT | + |
|
Preference number: 6 (lower is better) Translates to: CHYLHSVHAHHH*ETDSSNPPPRT Trigger: AGTCCGGGGTGGAGGATTTGAGCTGTCGGTCTCCAAGTGGTGGTGAGCATGCACCGAGTGAAGATAGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS GCA 72 bp | GAATCCCGGTCCTTGCCACTATCTTCACTCGGTGCATaGTCACCACCACTTGGAGACCGACAGCTCAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: ESRSLPLSSLGA*SPPLGDRQLKS Trigger: GGATTTGAGCTGTCGGTCTCCAAGTGGTGGTGAGCATGCACCGAGTGAAGATAGTGGCAAGGACCGGGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS GCA 72 bp | ATCAGAATCCCGGTCCTTGCCACTATCTTCACTCGGTaGATGCTCACCACCACTTGGAGACCGACAGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: IRIPVLATIFTR*MLTTTWRPTAQ Trigger: TTGAGCTGTCGGTCTCCAAGTGGTGGTGAGCATGCACCGAGTGAAGATAGTGGCAAGGACCGGGATTCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS CAA 72 bp | GCAGTGAGAAACACGGCTTCATCAGAATCCCGGTCCTaGCCACTATCTTCACTCGGTGCATGCTCACCACCA | + |
|
Preference number: 6 (lower is better) Translates to: AVRNTASSESRS*PLSSLGACSPP Trigger: TGGTGGTGAGCATGCACCGAGTGAAGATAGTGGCAAGGACCGGGATTCTGATGAAGCCGTGTTTCTCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS TCA 72 bp | GCTGTGTGCTTTGCTCCGAAGAAGACTGGATGGTTCTaGGATGAGGGGACGAGTAGGGCACTGATCTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: AVCFAPKKTGWF*DEGTSRALISL Trigger: AAGTGAGATCAGTGCCCTACTCGTCCCCTCATCTCAGAACCATCCAGTCTTCTTCGGAGCAAAGCACACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523571.1 |
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| CDS TCA 72 bp | CTGATCTCCAGGACTGATTCGCTCATCTGGCATCCGTaGGTAGTAACTCCACACACTTCTCTCCCGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LISRTDSLIWHP*VVTPHTSLPLC Trigger: ACACAGCGGGAGAGAAGTGTGTGGAGTTACTACTCACGGATGCCAGATGAGCGAATCAGTCCTGGAGATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523571.1 |
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| CDS GCA 72 bp | GCAGCGAATCAGCAGAGGGCATCCGGTAGCGGTTGTTaGCTGTTTCTCAATGGTGGAAATCTGACTGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AANQQRASGSGC*LFLNGGNLTVK Trigger: CTTCACAGTCAGATTTCCACCATTGAGAAACAGGCAACAACCGCTACCGGATGCCCTCTGCTGATTCGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000180173.10 ENST00000517317.5 ENST00000521857.5 |
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| CDS CAA 90 bp | AAACTTCAGGCAGTGAGAAACACGGCTTCATCAGAATCCCGGTCCTaGCCACTATCTTCACTCGGTGCATGCTCACCACCACTTGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: KLQAVRNTASSESRS*PLSSLGACSPPLGD Trigger: GTCTCCAAGTGGTGGTGAGCATGCACCGAGTGAAGATAGTGGCAAGGACCGGGATTCTGATGAAGCCGTGTTTCTCACTGCCTGAAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS CAA 90 bp | GGAGACCGACAGCTCAAATCCTCCACCCCGGACTCTTGGTCACTGTaGGCTGACAGATCTGGATCTGAACTTTTCAGATTGTCTTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GDRQLKSSTPDSWSL*ADRSGSELFRLSWV Trigger: AACCCAAGACAATCTGAAAAGTTCAGATCCAGATCTGTCAGCCAACAGTGACCAAGAGTCCGGGGTGGAGGATTTGAGCTGTCGGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000180173.10 |
||
| CDS CCA 72 bp | AGCTCAAATCCTCCACCCCGGACTCTTGGTCACTGTTaGCTGACAGATCTGGATCTGAACTTTTCAGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSNPPPRTLGHC*LTDLDLNFSDC Trigger: ACAATCTGAAAAGTTCAGATCCAGATCTGTCAGCCAACAGTGACCAAGAGTCCGGGGTGGAGGATTTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000180173.10 |
||
| CDS GCA 72 bp | GAGGTAGAAAACCCTGAGTGCTTGCTGGGCTCACTTTaGTTACTCTTCACCTTAGTGCAATTTAACTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: EVENPECLLGSL*LLFTLVQFNWT Trigger: GGTCCAGTTAAATTGCACTAAGGTGAAGAGTAAGCAAAGTGAGCCCAGCAAGCACTCAGGGTTTTCTACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180173.10 |
||
| CDS CAA 90 bp | ATCAGCACCCAGCCTTGCTCTCTTTCTTCTTTATCCAGCATGGGGTaGAATGAAAAGCAGTATAACTCCTCATATTTCACTGGCCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: ISTQPCSLSSLSSMG*NEKQYNSSYFTGLA Trigger: TGCAAGGCCAGTGAAATATGAGGAGTTATACTGCTTTTCATTCAACCCCATGCTGGATAAAGAAGAAAGAGAGCAAGGCTGGGTGCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000180173.10 ENST00000521857.5 |
||
| CDS TCA 72 bp | TTGTGGGAGACTGCCTGTTTTCTATACGGCCATCGATaGGCAATGACAGCACAGATAACTACTCTGGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: LWETACFLYGHR*AMTAQITTLVF Trigger: AAATACCAGAGTAGTTATCTGTGCTGTCATTGCTCATCGATGGCCGTATAGAAAACAGGCAGTCTCCCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518272.5 |
||
| CDS GCA 72 bp | GTGTATTCTTCACTAAGATCGATCAGCACCCAGCCTTaGTCTCTTTCTTCTTTATCCAGCATGGGGTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VYSSLRSISTQP*SLSSLSSMGLN Trigger: ATTCAACCCCATGCTGGATAAAGAAGAAAGAGAGCAAGGCTGGGTGCTGATCGATCTTAGTGAAGAATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000180173.10 ENST00000521857.5 |
||
| CDS CAA 90 bp | TCTTGGTCACTGTTGGCTGACAGATCTGGATCTGAACTTTTCAGATaGTCTTGGGTTAGAATCAGAGCAGAATCTTCATCGCCTTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SWSLLADRSGSELFR*SWVRIRAESSSPCE Trigger: TTCACAAGGCGATGAAGATTCTGCTCTGATTCTAACCCAAGACAATCTGAAAAGTTCAGATCCAGATCTGTCAGCCAACAGTGACCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS CCA 72 bp | TTTCTTGGGTCAGGTGAATTTTCCACGAATATGACATaGGTAGCCGTCAAATACAAAGTACCTAGAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FLGSGEFSTNMT*VAVKYKVPRAA Trigger: AGCAGCTCTAGGTACTTTGTATTTGACGGCTACCCATGTCATATTCGTGGAAAATTCACCTGACCCAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000180173.10 ENST00000517317.5 ENST00000521177.1 ENST00000521857.5 |
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| CDS CCA 72 bp | ATACATTCCACTCCAAAACTTGTACATGAAGTTACATaGTGTTGTAGGGAGATGAAGGGTTCCCTGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: IHSTPKLVHEVT*CCREMKGSLSL Trigger: CAGACTCAGGGAACCCTTCATCTCCCTACAACACCATGTAACTTCATGTACAAGTTTTGGAGTGGAATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000180173.10 ENST00000519590.5 ENST00000521857.5 |
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| CDS CCA 72 bp | GCTGACAGATCTGGATCTGAACTTTTCAGATTGTCTTaGGTTAGAATCAGAGCAGAATCTTCATCGCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: ADRSGSELFRLS*VRIRAESSSPC Trigger: ACAAGGCGATGAAGATTCTGCTCTGATTCTAACCCAAGACAATCTGAAAAGTTCAGATCCAGATCTGTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS CAA 72 bp | CTGTTGGCTGACAGATCTGGATCTGAACTTTTCAGATaGTCTTGGGTTAGAATCAGAGCAGAATCTTCATCG | + |
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Preference number: 6 (lower is better) Translates to: LLADRSGSELFR*SWVRIRAESSS Trigger: CGATGAAGATTCTGCTCTGATTCTAACCCAAGACAATCTGAAAAGTTCAGATCCAGATCTGTCAGCCAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000180173.10 |
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| CDS TCA 72 bp | TGCAGTTCATATAATGATCCTTGTGGTCACAAGCTGTaGGCTTGTCTTACATCAGAATCACTACTCAACAAC | + |
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Preference number: 6 (lower is better) Translates to: CSSYNDPCGHKL*ACLTSESLLNN Trigger: GTTGTTGAGTAGTGATTCTGATGTAAGACAAGCTCACAGCTTGTGACCACAAGGATCATTATATGAACTGCA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519122.5 |
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| CDS CAA 72 bp | ATTTCAGTGTCTTCCATTAAGCACAGAAATCCACCTTaGGTAATAATACTTCCCTTTAGGAAAAGCCGTGGT | + |
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Preference number: 6 (lower is better) Translates to: ISVSSIKHRNPP*VIILPFRKSRG Trigger: ACCACGGCTTTTCCTAAAGGGAAGTATTATTACCAAAGGTGGATTTCTGTGCTTAATGGAAGACACTGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518272.5 |
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| CDS CAA 90 bp | TACTCTGGTATTTCAGTGTCTTCCATTAAGCACAGAAATCCACCTTaGGTAATAATACTTCCCTTTAGGAAAAGCCGTGGTTATCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: YSGISVSSIKHRNPP*VIILPFRKSRGYLY Trigger: ATAAAGATAACCACGGCTTTTCCTAAAGGGAAGTATTATTACCAAAGGTGGATTTCTGTGCTTAATGGAAGACACTGAAATACCAGAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518272.5 |
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