RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MTMR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000100330

Ensembl transcript IDs: ENST00000323630.9, ENST00000333027.7, ENST00000351488.7, ENST00000401950.7, ENST00000406629.1, ENST00000415511.1, ENST00000480776.1, ENST00000487907.1, ENST00000491251.1, ENST00000492087.1

Found 1676 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTaGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCCAGGT +
Preference number: 1 (lower is better)
Translates to: LPFQSARASRSAQVE*ACHRNSSLATAHPG
Trigger: ACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
3UTR GCA 90 bp GAAGTCACCAAGTGGCCCTTCACTGCTGGCCAGCAGCCAGACAAGTaGCCACTCAGACAGCCAGGAGTGGCAAAGGGGGACTGCTCAGCA +
Preference number: 1 (lower is better)
Translates to: EVTKWPFTAGQQPDK*PLRQPGVAKGDCSA
Trigger: TGCTGAGCAGTCCCCCTTTGCCACTCCTGGCTGTCTGAGTGGGCACTTGTCTGGCTGCTGGCCAGCAGTGAAGGGCCACTTGGTGACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR TCA 90 bp ACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTaGCAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTG +
Preference number: 1 (lower is better)
Translates to: TILPPGRNKPSLSVT*QQAARQLQWAWQPL
Trigger: CAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR TCA 90 bp CTGGAAGTCAGAGACGTGCTCAGATGCTCTGGGCTTTGCCTGGACTaGGAGCACCAGGGAAGCCTTCTGGGCCACGCCTTAACCACACCC +
Preference number: 1 (lower is better)
Translates to: LEVRDVLRCSGLCLD*EHQGSLLGHALTTP
Trigger: GGGTGTGGTTAAGGCGTGGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCTGACTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp GCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTaGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGC +
Preference number: 1 (lower is better)
Translates to: ASPAAKGSQPALMWR*REEWLHVSTGFLPC
Trigger: GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR CCA 90 bp CTGCTGGCCAGCAGCCAGACAAGTGCCCACTCAGACAGCCAGGAGTaGCAAAGGGGGACTGCTCAGCAGTTATTCCTGTCCCAAGAAGAG +
Preference number: 1 (lower is better)
Translates to: LLASSQTSAHSDSQE*QRGTAQQLFLSQEE
Trigger: CTCTTCTTGGGACAGGAATAACTGCTGAGCAGTCCCCCTTTGCCACTCCTGGCTGTCTGAGTGGGCACTTGTCTGGCTGCTGGCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR TCA 90 bp ACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTaGGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAG +
Preference number: 1 (lower is better)
Translates to: TVCLSLQTSASFIHL*GDWLSSSQEGDDAQ
Trigger: CTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR GCA 90 bp ATGCAGCCACCTCCCTCAGGGCAATTCCTTGCCTTGGATCCTCACTaGACCTGCTTCACCAGCATCTTGGCTCTTCATCTCCCTACCCCC +
Preference number: 1 (lower is better)
Translates to: MQPPPSGQFLALDPH*TCFTSILALHLPTP
Trigger: GGGGGTAGGGAGATGAAGAGCCAAGATGCTGGTGAAGCAGGTGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGAGGGAGGTGGCTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR TCA 90 bp GCTTTCTTCCCTGCTCACGGTCTCAGATCTCCATACTCCTGGCTCTaGCCACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTG +
Preference number: 1 (lower is better)
Translates to: AFFPAHGLRSPYSWL*PPSSHPEETSHPSV
Trigger: CACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGAGCAGGGAAGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR TCA 90 bp ATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCTaGTGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCT +
Preference number: 1 (lower is better)
Translates to: ICFQPPQQQRVPNQL*CGGGVRNGCMLALA
Trigger: AGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR GCA 90 bp CCACCTCCCTCAGGGCAATTCCTTGCCTTGGATCCTCACTGCACCTaGTTCACCAGCATCTTGGCTCTTCATCTCCCTACCCCCAGAGAA +
Preference number: 1 (lower is better)
Translates to: PPPSGQFLALDPHCT*FTSILALHLPTPRE
Trigger: TTCTCTGGGGGTAGGGAGATGAAGAGCCAAGATGCTGGTGAAGCAGGTGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGAGGGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp CTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTaGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTT +
Preference number: 1 (lower is better)
Translates to: LPASPAAKGSQPALM*RWREEWLHVSTGFL
Trigger: AAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR CCA 90 bp TCAAACTGTGTTGCCACTGGAAGTCAGAGACGTGCTCAGATGCTCTaGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCA +
Preference number: 1 (lower is better)
Translates to: SNCVATGSQRRAQML*ALPGLRAPGKPSGP
Trigger: TGGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCTGACTTCCAGTGGCAACACAGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp CTCTACACCAGCCGAGAGGAACAAGGCTTCAGTGCAGTTGTGTGCTaGGGACAGCAGGACTCGTGTTTAAGTGTCAGAGGCTTAGAGGGG +
Preference number: 1 (lower is better)
Translates to: LYTSREEQGFSAVVC*GQQDSCLSVRGLEG
Trigger: CCCCTCTAAGCCTCTGACACTTAAACACGAGTCCTGCTGTCCCCAGCACACAACTGCACTGAAGCCTTGTTCCTCTCGGCTGGTGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 90 bp AACTGCCTTTCTCCATATGCAGCCACCTCCCTCAGGGCAATTCCTTaGCTTGGATCCTCACTGCACCTGCTTCACCAGCATCTTGGCTCT +
Preference number: 1 (lower is better)
Translates to: NCLSPYAATSLRAIP*LGSSLHLLHQHLGS
Trigger: AGAGCCAAGATGCTGGTGAAGCAGGTGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGAGGGAGGTGGCTGCATATGGAGAAAGGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 90 bp GAGCTCTACACCAGCCGAGAGGAACAAGGCTTCAGTGCAGTTGTGTaGTGGGGACAGCAGGACTCGTGTTTAAGTGTCAGAGGCTTAGAG +
Preference number: 1 (lower is better)
Translates to: ELYTSREEQGFSAVV*WGQQDSCLSVRGLE
Trigger: CTCTAAGCCTCTGACACTTAAACACGAGTCCTGCTGTCCCCAGCACACAACTGCACTGAAGCCTTGTTCCTCTCGGCTGGTGTAGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp TCAGAAAGTGACCCTAGAGAGACTGCCCCAAAGAGTGAAGGCCTCTaGGGAGCTCTGAGCAGGTCACTCTGGATCTTAGCCAACTCACCA +
Preference number: 1 (lower is better)
Translates to: SESDPRETAPKSEGL*GALSRSLWILANSP
Trigger: TGGTGAGTTGGCTAAGATCCAGAGTGACCTGCTCAGAGCTCCCCAGAGGCCTTCACTCTTTGGGGCAGTCTCTCTAGGGTCACTTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp CCTTTCTCCATATGCAGCCACCTCCCTCAGGGCAATTCCTTGCCTTaGATCCTCACTGCACCTGCTTCACCAGCATCTTGGCTCTTCATC +
Preference number: 1 (lower is better)
Translates to: PFSICSHLPQGNSLP*ILTAPASPASWLFI
Trigger: GATGAAGAGCCAAGATGCTGGTGAAGCAGGTGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGAGGGAGGTGGCTGCATATGGAGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp GCCCTGTTGCTTCAGACCAAATTCCCTCTACAGCCTGAAGCAAGCTaGCCTTGCCCACAGAGAACTGCCTTTCTCCATATGCAGCCACCT +
Preference number: 1 (lower is better)
Translates to: ALLLQTKFPLQPEAS*PCPQRTAFLHMQPP
Trigger: AGGTGGCTGCATATGGAGAAAGGCAGTTCTCTGTGGGCAAGGCCAGCTTGCTTCAGGCTGTAGAGGGAATTTGGTCTGAAGCAACAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 90 bp GGCTTTGGCCTTGACTGCATAAACATTTTGACCAGTCTGTACTCATaGCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAAAGCAG +
Preference number: 1 (lower is better)
Translates to: GFGLDCINILTSLYS*LRVGSATQPGPGKQ
Trigger: CTGCTTTCCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATGTTTATGCAGTCAAGGCCAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR GCA 90 bp TGTTTCACCACGTTCAAACTGTGTTGCCACTGGAAGTCAGAGACGTaGTCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAA +
Preference number: 1 (lower is better)
Translates to: CFTTFKLCCHWKSET*SDALGFAWTESTRE
Trigger: TTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCTGACTTCCAGTGGCAACACAGTTTGAACGTGGTGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR GCA 90 bp TTGCTTCAGACCAAATTCCCTCTACAGCCTGAAGCAAGCTGGCCTTaGCCACAGAGAACTGCCTTTCTCCATATGCAGCCACCTCCCTCA +
Preference number: 1 (lower is better)
Translates to: LLQTKFPLQPEASWP*PQRTAFLHMQPPPS
Trigger: TGAGGGAGGTGGCTGCATATGGAGAAAGGCAGTTCTCTGTGGGCAAGGCCAGCTTGCTTCAGGCTGTAGAGGGAATTTGGTCTGAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR TCA 90 bp CTGTTCAAGCAGGGAGGCTACTGGTATCTGCACACAACATGCAGATaGGCTCTACACCAGCCGAGAGGAACAAGGCTTCAGTGCAGTTGT +
Preference number: 1 (lower is better)
Translates to: LFKQGGYWYLHTTCR*ALHQPRGTRLQCSC
Trigger: ACAACTGCACTGAAGCCTTGTTCCTCTCGGCTGGTGTAGAGCTCATCTGCATGTTGTGTGCAGATACCAGTAGCCTCCCTGCTTGAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR TCA 90 bp AGCTGCAGCCCTGGGGACAGGTCACTTGAACTGGCAGCAGCTAAATaGAATCCTGCAACAGCACCTTCAAATCAGCCCTCATTCCCAAAA +
Preference number: 1 (lower is better)
Translates to: SCSPGDRSLELAAAK*NPATAPSNQPSFPK
Trigger: TTTTGGGAATGAGGGCTGATTTGAAGGTGCTGTTGCAGGATTTCATTTAGCTGCTGCCAGTTCAAGTGACCTGTCCCCAGGGCTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR TCA 90 bp TCTCCACGAGGCCCCAGAGAACAGTATGAAAACCGTGGAAGTAGGTaGCCTAAGGTCCCTTCCGCCTCTAAACATCAGGAATCCATGAAC +
Preference number: 1 (lower is better)
Translates to: SPRGPREQYENRGSR*PKVPSASKHQESMN
Trigger: GTTCATGGATTCCTGATGTTTAGAGGCGGAAGGGACCTTAGGTCACCTACTTCCACGGTTTTCATACTGTTCTCTGGGGCCTCGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 90 bp CAAAGGAGCATCCACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATaGCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTA +
Preference number: 1 (lower is better)
Translates to: QRSIHFPFPKRRLRG*HLPCASPSKHQPHL
Trigger: TAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTGGATGCTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR GCA 90 bp TCCTCTCTGTGTGGAGAGAGGGCGGGAAGGAGACCTCTAGTTGACTaGATAACCCAATCACATCTAATTCCATTTCTGCCCCCAGTTCTC +
Preference number: 1 (lower is better)
Translates to: SSLCGERAGRRPLVD*ITQSHLIPFLPPVL
Trigger: GAGAACTGGGGGCAGAAATGGAATTAGATGTGATTGGGTTATGCAGTCAACTAGAGGTCTCCTTCCCGCCCTCTCTCCACACAGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp AATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTGAACTaGCAGCAGCTAAATGAAATCCTGCAACAGCACCTTCAAATCAGC +
Preference number: 1 (lower is better)
Translates to: NQVDTAAALGTGHLN*QQLNEILQQHLQIS
Trigger: GCTGATTTGAAGGTGCTGTTGCAGGATTTCATTTAGCTGCTGCCAGTTCAAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 90 bp ATGTGGAAAAGAACTACACCCTGTTTCACCACGTTCAAACTGTGTTaGCACTGGAAGTCAGAGACGTGCTCAGATGCTCTGGGCTTTGCC +
Preference number: 1 (lower is better)
Translates to: MWKRTTPCFTTFKLC*HWKSETCSDALGFA
Trigger: GGCAAAGCCCAGAGCATCTGAGCACGTCTCTGACTTCCAGTGGCAACACAGTTTGAACGTGGTGAAACAGGGTGTAGTTCTTTTCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp AGAGTCAAGCATGGCCTCCCCAAGAGGGAGGGCAGGCACAAAACATaGATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCT +
Preference number: 1 (lower is better)
Translates to: RVKHGLPKREGRHKT*MPRLQSTNLTLLQP
Trigger: AGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCATCCATGTTTTGTGCCTGCCCTCCCTCTTGGGGAGGCCATGCTTGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp AAAAGAACTACACCCTGTTTCACCACGTTCAAACTGTGTTGCCACTaGAAGTCAGAGACGTGCTCAGATGCTCTGGGCTTTGCCTGGACT +
Preference number: 1 (lower is better)
Translates to: KRTTPCFTTFKLCCH*KSETCSDALGFAWT
Trigger: AGTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCTGACTTCCAGTGGCAACACAGTTTGAACGTGGTGAAACAGGGTGTAGTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR TCA 90 bp TGGGAACTCTTCAGAGAAGGAGGAATAGCTGCCAGGTCAGATCCCTaGCTGCTTTGCCCTCTTTTAGCCTGGGAGATTTTAGGAGCAAAA +
Preference number: 1 (lower is better)
Translates to: WELFREGGIAARSDP*LLCPLLAWEILGAK
Trigger: TTTTGCTCCTAAAATCTCCCAGGCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCTCTGAAGAGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR TCA 90 bp GGACTGAGGGTAGCTGAGATGGCACATTCTCCTTCCACAGAAGAATaGTTTCTTGTTTTCAAACGCCTGCTGGGTGGCACTTACGGCTTT +
Preference number: 1 (lower is better)
Translates to: GLRVAEMAHSPSTEE*FLVFKRLLGGTYGF
Trigger: AAAGCCGTAAGTGCCACCCAGCAGGCGTTTGAAAACAAGAAATCATTCTTCTGTGGAAGGAGAATGTGCCATCTCAGCTACCCTCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp ACAATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATaGTTTTCACAACTTCATATGAATACACAGACTGGGCTGCCTGGC +
Preference number: 1 (lower is better)
Translates to: TIVAVCRHDGHGTHS*FSQLHMNTQTGLPG
Trigger: GCCAGGCAGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 90 bp CACATTCTCCTTCCACAGAAGAATGATTTCTTGTTTTCAAACGCCTaGTGGGTGGCACTTACGGCTTTCACACTAGAACCAGCTCAGCTG +
Preference number: 1 (lower is better)
Translates to: HILLPQKNDFLFSNA*WVALTAFTLEPAQL
Trigger: CAGCTGAGCTGGTTCTAGTGTGAAAGCCGTAAGTGCCACCCAGCAGGCGTTTGAAAACAAGAAATCATTCTTCTGTGGAAGGAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp ATTCTCCTTCCACAGAAGAATGATTTCTTGTTTTCAAACGCCTGCTaGGTGGCACTTACGGCTTTCACACTAGAACCAGCTCAGCTGGCT +
Preference number: 1 (lower is better)
Translates to: ILLPQKNDFLFSNAC*VALTAFTLEPAQLA
Trigger: AGCCAGCTGAGCTGGTTCTAGTGTGAAAGCCGTAAGTGCCACCCAGCAGGCGTTTGAAAACAAGAAATCATTCTTCTGTGGAAGGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR TCA 90 bp TCATATGAATACACAGACTGGGCTGCCTGGCGGACTGAGGGTAGCTaGGATGGCACATTCTCCTTCCACAGAAGAATGATTTCTTGTTTT +
Preference number: 1 (lower is better)
Translates to: SYEYTDWAAWRTEGS*DGTFSFHRRMISCF
Trigger: AAAACAAGAAATCATTCTTCTGTGGAAGGAGAATGTGCCATCTCAGCTACCCTCAGTCCGCCAGGCAGCCCAGTCTGTGTATTCATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 90 bp GGGCTAGAGTTAACTTCAACAGGCATGGGATCTCCCAGCCTCATGTaGAAGCAGGCAAGTATATCAGGATATGCCTTTAATTCTCATCTT +
Preference number: 1 (lower is better)
Translates to: GLELTSTGMGSPSLM*KQASISGYAFNSHL
Trigger: AAGATGAGAATTAAAGGCATATCCTGATATACTTGCCTGCTTGCACATGAGGCTGGGAGATCCCATGCCTGTTGAAGTTAACTCTAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR TCA 90 bp AGGGATGCCCAACAGTGCTGTAGGGTAAAGAAAAATCTACCTCTGTaGAGAGCAAGAACTAGTATTGAAGTGACTAGATGCCACAGTCCT +
Preference number: 1 (lower is better)
Translates to: RDAQQCCRVKKNLPL*RARTSIEVTRCHSP
Trigger: AGGACTGTGGCATCTAGTCACTTCAATACTAGTTCTTGCTCTTCACAGAGGTAGATTTTTCTTTACCCTACAGCACTGTTGGGCATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp AGAACCACAGTGACAACCCAAATCCAGGGGCTCAACAACTGTTTGTaGGTGAAAATGACAGATTTATTCAACTTAAATGGTCACCGAGGC +
Preference number: 1 (lower is better)
Translates to: RTTVTTQIQGLNNCL*VKMTDLFNLNGHRG
Trigger: GCCTCGGTGACCATTTAAGTTGAATAAATCTGTCATTTTCACCCACAAACAGTTGTTGAGCCCCTGGATTTGGGTTGTCACTGTGGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 90 bp AAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATaGATAGTCACTTTGCTCCACAGCCCAGGGTCCACTTTAAATTCT +
Preference number: 1 (lower is better)
Translates to: KLNSWDSCHIIQKSK*IVTLLHSPGSTLNS
Trigger: AGAATTTAAAGTGGACCCTGGGCTGTGGAGCAAAGTGACTATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTaGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACC +
Preference number: 2 (lower is better)
Translates to: PRSHSKVHGPLGLPR*SGPVIGTAAWPLPT
Trigger: GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
3UTR-3UTR CCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGGCTCGGCAGTTACAGTaGGCCTGGCAACCCTTGGTC +
Preference number: 2 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVARQLQ*AWQPLV
Trigger: GACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGC...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGCAGCAGCTTGGCCACTaGCCACCCAGGTCACTGAGC +
Preference number: 2 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRQQLGH*PPRSLS
Trigger: GCTCAGTGACCTGGGTGGGCAGTGGCCAAGCTGCTG...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCAGCAGCTTGGCCACTaGCCACCCAGGTCACTGAGC +
Preference number: 2 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCQQLGH*PPRSLS
Trigger: GCTCAGTGACCTGGGTGGGCAGTGGCCAAGCTGCTG...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
3UTR-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCATAGGAACAGCAGCTTaGCCACTGCCCACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: TLPFQSARASRSAQVEWAIGTAA*PLPTQV
Trigger: GACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTAT...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
3UTR CAA 90 bp GGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTaGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAA +
Preference number: 2 (lower is better)
Translates to: GSAPRRREMMPRAVL*GNMLPASPAAKGSQ
Trigger: TTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTATAGGAACAGCAGCTTaGCCACTGCCCACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: GGSTLPFQSARASRSAQVIGTAA*PLPTQV
Trigger: GACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTAT...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
3UTR-3UTR CCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCGCTCGGCAGTTACAGTaGGCCTGGCAACCCTTGGTC +
Preference number: 2 (lower is better)
Translates to: SDALGFAWTESTREAFWAARQLQ*AWQPLV
Trigger: GACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGC...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCCAGCAGAGTCAAGCATaGCCTCCCCAAGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: SDALGFAWTESTREAFWAQQSQA*PPQEGG
Trigger: CCCTCCCTCTTGGGGAGGCCATGCTTGACTCTGCTG...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCACAGCAGCTTGGCCACTaGCCACCCAGGTCACTGAGC +
Preference number: 2 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTAQQLGH*PPRSLS
Trigger: GCTCAGTGACCTGGGTGGGCAGTGGCCAAGCTGCTG...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR CAA 90 bp TGTGTTGCCACTGGAAGTCAGAGACGTGCTCAGATGCTCTGGGCTTaGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCACGCCTT +
Preference number: 2 (lower is better)
Translates to: CVATGSQRRAQMLWA*PGLRAPGKPSGPRL
Trigger: AAGGCGTGGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCTGACTTCCAGTGGCAACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp GACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGTCCCTCAGTGTCACGTaGCAGCAGGCAGCTCGGCAG +
Preference number: 2 (lower is better)
Translates to: DTPCPWSGNCYQGEEEYRSLSVT*QQAARQ
Trigger: CTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGGA...CCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp TCCTCTCTGTGTGGAGAGAGGGCGGGAAGGAGACCTCTAGTTGACTGCATAACCCAGCAGCTTGGCCACTaGCCACCCAGGTCACTGAGC +
Preference number: 2 (lower is better)
Translates to: SSLCGERAGRRPLVDCITQQLGH*PPRSLS
Trigger: GCTCAGTGACCTGGGTGGGCAGTGGCCAAGCTGCTG...GGTTATGCAGTCAACTAGAGGTCTCCTTCCCGCCCTCTCTCCACACAGAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp ACGTGCTCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCCAGCAGCCAGACAAGTaGCCACTCAGACAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: TCSDALGFAWTESTREAFQQPDK*PLRQPG
Trigger: TCCTGGCTGTCTGAGTGGGCACTTGTCTGGCTGCTG...GAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCGCTCTGATGTGGCGGTaGCGTGAGGAATGGTTGCAT +
Preference number: 2 (lower is better)
Translates to: SDALGFAWTESTREAFWAALMWR*REEWLH
Trigger: ATGCAACCATTCCTCACGCCACCGCCACATCAGAGC...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp GACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGGACCAGGCCCCAGAATaGGGACCCAGGTGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: DTPCPWSGNCYQGEEEYRDQAPE*GPRCVW
Trigger: CCAGACACACCTGGGTCCCCATTCTGGGGCCTGGTC...CCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp CACCCAGGCATGCACAGAACCACCTTCCTGAGACACACCTTGCCCTaGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: HPGMHRTTFLRHTLP*VRELLPRGRGIQGR
Trigger: CCTGCCCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGTTCTGTGCATGCCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp GACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGGCTCCCATTCCAAAGTaGACGGGCCTCTCGGTCTGC +
Preference number: 2 (lower is better)
Translates to: DTPCPWSGNCYQGEEEYRAPIPK*TGLSVC
Trigger: GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGC...CCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCACTGGCTTTCTTCCCTaGTCACGGTCTCAGATCTCC +
Preference number: 2 (lower is better)
Translates to: SDALGFAWTESTREAFWATGFLP*SRSQIS
Trigger: GGAGATCTGAGACCGTGAGCAGGGAAGAAAGCCAGT...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCATAGGAACAGCAGCTTaGCCACTGCCCACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCIGTAA*PLPTQV
Trigger: GACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTAT...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTTCTGCCCAGGTTGAGTaGGCCTGTCATAGGAACAGC +
Preference number: 2 (lower is better)
Translates to: LLGNMLPASPAAKGSQPASAQVE*ACHRNS
Trigger: GCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGA...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCCGGTGGCGTGAGGAATaGTTGCATGTTAGCACTGGC +
Preference number: 2 (lower is better)
Translates to: SALGEYASSLPSSKGFPTRWREE*LHVSTG
Trigger: GCCAGTGCTAACATGCAACCATTCCTCACGCCACCG...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCAACCAGCTCTGATGTaGCGGTGGCGTGAGGAATGG +
Preference number: 2 (lower is better)
Translates to: HLSICEGTGSAPRRREMMQPALM*RWREEW
Trigger: CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTG...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR CAA 90 bp GAACTGCCTTTCTCCATATGCAGCCACCTCCCTCAGGGCAATTCCTaGCCTTGGATCCTCACTGCACCTGCTTCACCAGCATCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: ELPFSICSHLPQGNS*PWILTAPASPASWL
Trigger: GAGCCAAGATGCTGGTGAAGCAGGTGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGAGGGAGGTGGCTGCATATGGAGAAAGGCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGATAGGAACAGCAGCTTaGCCACTGCCCACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWIGTAA*PLPTQV
Trigger: GACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTAT...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCAATCTACAATCCAGTaGTGCATCCCAAATCTGTCA +
Preference number: 2 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVQSTIQ*CIPNLS
Trigger: TGACAGATTTGGGATGCACCACTGGATTGTAGATTG...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTACTGGCTTTCTTCCCTaGTCACGGTCTCAGATCTCC +
Preference number: 2 (lower is better)
Translates to: KGSQPALMWRWREEWLHVTGFLP*SRSQIS
Trigger: GGAGATCTGAGACCGTGAGCAGGGAAGAAAGCCAGT...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCGTCACTCTGTACAGGTaGTTCCACGCTCCCATTCCA +
Preference number: 2 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCVTLYR*FHAPIP
Trigger: TGGAATGGGAGCGTGGAACCACCTGTACAGAGTGAC...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGGTCACTCTGTACAGGTaGTTCCACGCTCCCATTCCA +
Preference number: 2 (lower is better)
Translates to: HLSICEGTGSAPRRREMMVTLYR*FHAPIP
Trigger: TGGAATGGGAGCGTGGAACCACCTGTACAGAGTGAC...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTCGGTGGCGTGAGGAATaGTTGCATGTTAGCACTGGC +
Preference number: 2 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASRWREE*LHVSTG
Trigger: GCCAGTGCTAACATGCAACCATTCCTCACGCCACCG...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGTCAGACAGCCAGGAGTaGCAAAGGGGGACTGCTCAG +
Preference number: 2 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKSDSQE*QRGTAQ
Trigger: CTGAGCAGTCCCCCTTTGCCACTCCTGGCTGTCTGA...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp GTGTCTGGGCTCAGGGCAGGCTTTGGCCTTGACTGCATAAACATTTaGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAG +
Preference number: 2 (lower is better)
Translates to: VSGLRAGFGLDCINI*TSLYSCLRVGSATQ
Trigger: CTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATGTTTATGCAGTCAAGGCCAAAGCCTGCCCTGAGCCCAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATTCCCTCAGTGTCACGTaGCAGCAGGCAGCTCGGCAG +
Preference number: 2 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDSLSVT*QQAARQ
Trigger: CTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGGA...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp GGCTGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTTGAGGCGAGAGGTAGTGGCAAAGGGGGACTaGTCAGCAGTTATTCCTGTC +
Preference number: 2 (lower is better)
Translates to: GCPEIRAAAKNGALRREVVAKGD*SAVIPV
Trigger: GACAGGAATAACTGCTGAGCAGTCCCCCTTTGCCAC...TACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp GGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACCAAGTGGCCCTTCACTGCAGTTACAGTGGGCCTaGCAACCCTTGGTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: GHVTSLRNPTKSPSGPSLQLQWA*QPLVFH
Trigger: ATGGAAGACCAAGGGTTGCCAGGCCCACTGTAACTG...CAGTGAAGGGCCACTTGGTGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGCGGTGGCGTGAGGAATaGTTGCATGTTAGCACTGGC +
Preference number: 2 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKRWREE*LHVSTG
Trigger: GCCAGTGCTAACATGCAACCATTCCTCACGCCACCG...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp ACGTGCTCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCATGATTGGTTTGGTTTaGGAACGGGGGATTTCTGGA +
Preference number: 2 (lower is better)
Translates to: TCSDALGFAWTESTREAFMIGLV*ERGISG
Trigger: TCCAGAAATCCCCCGTTCCCAAACCAAACCAATCAT...GAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AGACAACCTGGCAGCTCAAAGTCACAGTTCATGCCCTGTTGCTTCAGACCAAATGTGGCCCTTCACTGCTaGCCAGCAGCCAGACAAGTG +
Preference number: 2 (lower is better)
Translates to: RQPGSSKSQFMPCCFRPNVALHC*PAARQV
Trigger: CACTTGTCTGGCTGCTGGCCAGCAGTGAAGGGCCAC...ATTTGGTCTGAAGCAACAGGGCATGAACTGTGACTTTGAGCTGCCAGGTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAACAGCAGAGTCAAGCATaGCCTCCCCAAGAGGGAGGG +
Preference number: 2 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQQQSQA*PPQEGG
Trigger: CCCTCCCTCTTGGGGAGGCCATGCTTGACTCTGCTG...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp GGCTGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTTGAGGCGAGAGGTATTTCCCTGTGCTGGCTaGGGAAGAGATTGTTTAGGG +
Preference number: 2 (lower is better)
Translates to: GCPEIRAAAKNGALRREVFPCAG*GRDCLG
Trigger: CCCTAAACAATCTCTTCCTCAGCCAGCACAGGGAAA...TACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp GGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACCAAGTGGCCCTTCACTGTTTCCCTGTGCTGGCTaGGGAAGAGATTGTTTAGGG +
Preference number: 2 (lower is better)
Translates to: GHVTSLRNPTKSPSGPSLFPCAG*GRDCLG
Trigger: CCCTAAACAATCTCTTCCTCAGCCAGCACAGGGAAA...CAGTGAAGGGCCACTTGGTGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCATCTACAATCCAGTGGTaGATCCCAAATCTGTCACTC +
Preference number: 2 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTASTIQW*IPNLSL
Trigger: GAGTGACAGATTTGGGATGCACCACTGGATTGTAGA...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp AGAAGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTTGCCCTCTTTTAGCACTGGCTTTCTTCCCTaGTCACGGTCTCAGATCTCC +
Preference number: 2 (lower is better)
Translates to: RRRNSCQVRSLTALPSFSTGFLP*SRSQIS
Trigger: GGAGATCTGAGACCGTGAGCAGGGAAGAAAGCCAGT...GCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AGAAGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTTGCCCTCTTTTAGCGTCACTCTGTACAGGTaGTTCCACGCTCCCATTCCA +
Preference number: 2 (lower is better)
Translates to: RRRNSCQVRSLTALPSFSVTLYR*FHAPIP
Trigger: TGGAATGGGAGCGTGGAACCACCTGTACAGAGTGAC...GCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp GAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGGAAGATCCATGATTaGTTTGGTTTGGGAACGGGG +
Preference number: 2 (lower is better)
Translates to: ETHLALGQGTATKGKRNTGKIHD*FGLGTG
Trigger: CCCCGTTCCCAAACCAAACCAATCATGGATCTTCCC...TGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp CAATTCCTTGCCTTGGATCCTCACTGCACCTGCTTCACCAGCATCTaGGCTCTTCATCTCCCTACCCCCAGAGAAGCTTTCCATTTAGGA +
Preference number: 2 (lower is better)
Translates to: QFLALDPHCTCFTSI*ALHLPTPREAFHLG
Trigger: TCCTAAATGGAAAGCTTCTCTGGGGGTAGGGAGATGAAGAGCCAAGATGCTGGTGAAGCAGGTGCAGTGAGGATCCAAGGCAAGGAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp GAGATGAAGACAACCTGGCAGCTCAAAGTCACAGTTCATGCCCTGTaGCTTCAGACCAAATTCCCTCTACAGCCTGAAGCAAGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: EMKTTWQLKVTVHAL*LQTKFPLQPEASWP
Trigger: AGGCCAGCTTGCTTCAGGCTGTAGAGGGAATTTGGTCTGAAGCAACAGGGCATGAACTGTGACTTTGAGCTGCCAGGTTGTCTTCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTTCCCAGCCCCTCGCCTaGCTCAAAGGAGCATCCACT +
Preference number: 2 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWASQPLA*LKGAST
Trigger: AGTGGATGCTCCTTTGAGGCAGGCGAGGGGCTGGGA...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAATCTGCCCAGGTTGAGTaGGCCTGTCATAGGAACAGC +
Preference number: 2 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQSAQVE*ACHRNS
Trigger: GCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGA...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp TCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAAAGCACAATCTACAATCCAGTaGTGCATCCCAAATCTGTCA +
Preference number: 2 (lower is better)
Translates to: SVLMPEGGKCYTAWPRKAQSTIQ*CIPNLS
Trigger: TGACAGATTTGGGATGCACCACTGGATTGTAGATTG...TGCTTTCCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACAGTTACAGTGGGCCTaGCAACCCTTGGTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSQLQWA*QPLVFH
Trigger: ATGGAAGACCAAGGGTTGCCAGGCCCACTGTAACTG...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAACCACGGGGGACAACATaGCGGCTACCCACTCCCAGC +
Preference number: 2 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKPRGTT*RLPTPS
Trigger: GCTGGGAGTGGGTAGCCGTCATGTTGTCCCCCGTGG...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp GTTTTTGGACCATATCAAAGCTCACTGAGGAAAGGTGCCCTGAATCTCCTCAAGCGGTGGCGTGAGGAATaGTTGCATGTTAGCACTGGC +
Preference number: 2 (lower is better)
Translates to: VFGPYQSSLRKGALNLLKRWREE*LHVSTG
Trigger: GCCAGTGCTAACATGCAACCATTCCTCACGCCACCG...CTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAGCTTTGATATGGTCCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp GGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACCAAGTGGCCCTTCACTGATGATTGGTTTGGTTTaGGAACGGGGGATTTCTGGA +
Preference number: 2 (lower is better)
Translates to: GHVTSLRNPTKSPSGPSLMIGLV*ERGISG
Trigger: TCCAGAAATCCCCCGTTCCCAAACCAAACCAATCAT...CAGTGAAGGGCCACTTGGTGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AGAAGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTTGCCCTCTTTTAGCGAAAGGCTGATTGTATaGGACCTGCTCCCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: RRRNSCQVRSLTALPSFSERLIV*DLLPFP
Trigger: TGGAAAAGGGAGCAGGTCCCATACAATCAGCCTTTC...GCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp AGGCTGATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTaGGGAACGGGGGATTTCTGGAACCCTGAGTCTGGATTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: RLILPLKGKIHDWFG*GTGDFWNPESGFPC
Trigger: ACAGGGAAATCCAGACTCAGGGTTCCAGAAATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAATCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp AATGTGGAAAAGAACTACACCCTGTTTCACCACGTTCAAACTGTGTaGCCACTGGAAGTCAGAGACGTGCTCAGATGCTCTGGGCTTTGC +
Preference number: 2 (lower is better)
Translates to: NVEKNYTLFHHVQTV*PLEVRDVLRCSGLC
Trigger: GCAAAGCCCAGAGCATCTGAGCACGTCTCTGACTTCCAGTGGCAACACAGTTTGAACGTGGTGAAACAGGGTGTAGTTCTTTTCCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAGTTCCCAACCAGCTCTaGTGTGGCGGTGGCGTGAGG +
Preference number: 2 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKVPNQL*CGGGVR
Trigger: CCTCACGCCACCGCCACATCAGAGCTGGTTGGGAAC...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp GCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACATTCAGAAAGTGACCGACTGCCCCAAAGAGTaGAGGCCTCTGGGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: AGSLCLYTLGRRYIQKVTDCPKE*RPLGSS
Trigger: AGAGCTCCCCAGAGGCCTTCACTCTTTGGGGCAGTC...GGTCACTTTCTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGTCTACAATCCAGTGGTaGATCCCAAATCTGTCACTC +
Preference number: 2 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKSTIQW*IPNLSL
Trigger: GAGTGACAGATTTGGGATGCACCACTGGATTGTAGA...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCAGGAAATGCGTTCAGTaGTTGAACATCATGGTGAGG +
Preference number: 2 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLRKCVQ*LNIMVR
Trigger: CCTCACCATGATGTTCAAGCACTGAACGCATTTCCT...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTATAGGAACAGCAGCTTaGCCACTGCCCACCCAGGTC +
Preference number: 2 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTIIGTAA*PLPTQV
Trigger: GACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTAT...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTCTGCCCAGGTTGAGTaGGCCTGTCATAGGAACAGC +
Preference number: 2 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWSAQVE*ACHRNS
Trigger: GCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGA...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
3UTR-3UTR CCA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTAAGTGCTACACAGCCTaGCCCAGGAAAGCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: SSIRPTFSLPARLDDTECKCYTA*PRKAAP
Trigger: GGGGGCTGCTTTCCTGGGCCAGGCTGTGTAGCACTT...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCTGGATTTCCCTGTGCTaGCTGAGGAAGAGATTGTTT +
Preference number: 2 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLWISLC*LRKRLF
Trigger: AAACAATCTCTTCCTCAGCCAGCACAGGGAAATCCA...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCAGAAAGGCTGATTGTATaGGACCTGCTCCCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSERLIV*DLLPFP
Trigger: TGGAAAAGGGAGCAGGTCCCATACAATCAGCCTTTC...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTTCAGACAGCCAGGAGTaGCAAAGGGGGACTGCTCAG +
Preference number: 2 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTISDSQE*QRGTAQ
Trigger: CTGAGCAGTCCCCCTTTGCCACTCCTGGCTGTCTGA...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp AGTACTGGCTGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTaGAGGCGAGAGGTAGTTGTAATGACTACTGATGGGAACTCTTCA +
Preference number: 2 (lower is better)
Translates to: STGCPEIRAAAKNGA*RREVVVMTTDGNSS
Trigger: TGAAGAGTTCCCATCAGTAGTCATTACAACTACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCAGCCAGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp TGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATAGTCACTTaGCTCCACAGCCCAGGGTCCACTTTAAATTCTGCTGTTAGCCCT +
Preference number: 2 (lower is better)
Translates to: WDSCHIIQKSKWIVT*LHSPGSTLNSAVSP
Trigger: AGGGCTAACAGCAGAATTTAAAGTGGACCCTGGGCTGTGGAGCAAAGTGACTATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTGCTCTGATGTGGCGGTaGCGTGAGGAATGGTTGCAT +
Preference number: 2 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTIALMWR*REEWLH
Trigger: ATGCAACCATTCCTCACGCCACCGCCACATCAGAGC...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AGAAGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTTGCCCTCTTTTAGCGAGCCCAAGACAATCTaGGTCAAGTTAAAAATGGGA +
Preference number: 2 (lower is better)
Translates to: RRRNSCQVRSLTALPSFSEPKTI*VKLKMG
Trigger: TCCCATTTTTAACTTGACCCAGATTGTCTTGGGCTC...GCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACTCATTTATCCATCTGTaGGGGGACTGGCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYSFIHL*GDWLSS
Trigger: GGAGCTGAGCCAGTCCCCTCACAGATGGATAAATGA...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCATGTAACTCTAAAGGCTaGTTCTACCCCTTAAAGGGA +
Preference number: 2 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSCNSKG*FYPLKG
Trigger: TCCCTTTAAGGGGTAGAATCAGCCTTTAGAGTTACA...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAATCTACAATCCAGTGGTaGATCCCAAATCTGTCACTC +
Preference number: 2 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQSTIQW*IPNLSL
Trigger: GAGTGACAGATTTGGGATGCACCACTGGATTGTAGA...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTTACGAAGTCACCAAGTaGCCCTTCACTGCTGGCCAG +
Preference number: 2 (lower is better)
Translates to: SSIRPTFSLPARLDDTECYEVTK*PFTAGQ
Trigger: CTGGCCAGCAGTGAAGGGCCACTTGGTGACTTCGTA...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp GGTGGCACTTACGGCTTTCACACTAGAACCAGCTCAGCTGGCTCTTaGTGTTTGTATACTTTAGGTAGAAGGTACATTCAGAAAGTGACC +
Preference number: 2 (lower is better)
Translates to: GGTYGFHTRTSSAGS*CLYTLGRRYIQKVT
Trigger: GGTCACTTTCTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGTGTGAAAGCCGTAAGTGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAATTTCACAACTTCATATaGATACACAGACTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQFHNFI*IHRLGC
Trigger: GCAGCCCAGTCTGTGTATTCATATGAAGTTGTGAAA...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAATGCTCTTGGGGAATATaGTTCCAGCCTCCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKECSWGI*FQPPQQ
Trigger: CTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCA...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATGCTTCACCAGCATCTTaGCTCTTCATCTCCCTACCC +
Preference number: 2 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDASPAS*LFISLP
Trigger: GGGTAGGGAGATGAAGAGCCAAGATGCTGGTGAAGC...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp CTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACTTCATATATAGGAGCACTGACTaGCTCCTCTTTAGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: LCVDTMAMAHTHGFHNFIYRSTD*LLFRRK
Trigger: TTTTCTCCTAAAGAGGAGTCAGTCAGTGCTCCTATA...TATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAGTGGCAAAGGGGGACTaGTCAGCAGTTATTCCTGTC +
Preference number: 2 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKVAKGD*SAVIPV
Trigger: GACAGGAATAACTGCTGAGCAGTCCCCCTTTGCCAC...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp AGACAACCTGGCAGCTCAAAGTCACAGTTCATGCCCTGTTGCTTCAGACCAAATAGACCTCTAGTTGACTaGATAACCCAATCACATCTA +
Preference number: 2 (lower is better)
Translates to: RQPGSSKSQFMPCCFRPNRPLVD*ITQSHL
Trigger: TAGATGTGATTGGGTTATGCAGTCAACTAGAGGTCT...ATTTGGTCTGAAGCAACAGGGCATGAACTGTGACTTTGAGCTGCCAGGTTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAAGTCACTCTGTACAGGTaGTTCCACGCTCCCATTCCA +
Preference number: 2 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKEVTLYR*FHAPIP
Trigger: TGGAATGGGAGCGTGGAACCACCTGTACAGAGTGAC...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp ACTTACGGCTTTCACACTAGAACCAGCTCAGCTGGCTCTTTGTGTTaGTATACTTTAGGTAGAAGGTACATTCAGAAAGTGACCCTAGAG +
Preference number: 2 (lower is better)
Translates to: TYGFHTRTSSAGSLC*YTLGRRYIQKVTLE
Trigger: CTCTAGGGTCACTTTCTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGTGTGAAAGCCGTAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 90 bp AGGAGAACCACAGTGACAACCCAAATCCAGGGGCTCAACAACTGTTaGTGGGTGAAAATGACAGATTTATTCAACTTAAATGGTCACCGA +
Preference number: 2 (lower is better)
Translates to: RRTTVTTQIQGLNNC*WVKMTDLFNLNGHR
Trigger: TCGGTGACCATTTAAGTTGAATAAATCTGTCATTTTCACCCACAAACAGTTGTTGAGCCCCTGGATTTGGGTTGTCACTGTGGTTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATTCAAACACTTCTGTGTaGGAGGGAAAAGGGACGAAG +
Preference number: 2 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDSNTSV*EGKGTK
Trigger: CTTCGTCCCTTTTCCCTCTCACACAGAAGTGTTTGA...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp CTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACTTCATAAGACCTCTAGTTGACTaGATAACCCAATCACATCTA +
Preference number: 2 (lower is better)
Translates to: LCVDTMAMAHTHGFHNFIRPLVD*ITQSHL
Trigger: TAGATGTGATTGGGTTATGCAGTCAACTAGAGGTCT...TATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATTTCAGTGCAGTTGTGTaGTGGGGACAGCAGGACTCG +
Preference number: 2 (lower is better)
Translates to: NIPFISSTASEPHGLCFHFSAVV*WGQQDS
Trigger: CGAGTCCTGCTGTCCCCAGCACACAACTGCACTGAA...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAGGGAAGATCCATGATTaGTTTGGTTTGGGAACGGGG +
Preference number: 2 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKGKIHD*FGLGTG
Trigger: CCCCGTTCCCAAACCAAACCAATCATGGATCTTCCC...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp CTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACTTCATATTATATGTACAGCTATaGAGAGTTACGGTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: LCVDTMAMAHTHGFHNFILYVQL*RVTVPP
Trigger: AGGAGGAACCGTAACTCTCCATAGCTGTACATATAA...TATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR TCA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAAGGCAGGCTTTGGCCTTaGCTGCATAAACATTTTGAC +
Preference number: 2 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKEGRLWP*LHKHFD
Trigger: GTCAAAATGTTTATGCAGTCAAGGCCAAAGCCTGCC...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTAGTGTTTTAATTTGCTaGAGACTAGCCCACAGGAAC +
Preference number: 2 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTISVLIC*RLAHRN
Trigger: GTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACT...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACTTATATGTACAGCTATaGAGAGTTACGGTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYLYVQL*RVTVPP
Trigger: AGGAGGAACCGTAACTCTCCATAGCTGTACATATAA...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp GCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACATTCAGAAAGTGACCAAATCACTGAGGAAATaGGTTCAGTGCTTGAACATC +
Preference number: 2 (lower is better)
Translates to: AGSLCLYTLGRRYIQKVTKSLRK*VQCLNI
Trigger: GATGTTCAAGCACTGAACGCATTTCCTCAGTGATTT...GGTCACTTTCTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR GCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATGGAAGTGTTAGCAAATaGTACCATGTGGAACACTCA +
Preference number: 2 (lower is better)
Translates to: NIPFISSTASEPHGLCFHGSVSK*YHVEHS
Trigger: TGAGTGTTCCACATGGTAGCATTTGCTAACACTTCC...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGCATAGGAACAGCAGCTaGGCCACTGCCCACCCAGGT +
Preference number: 3 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRHRNSS*ATAHPG
Trigger: ACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTATG...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
3UTR CCA 72 bp CAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTaGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCC +
Preference number: 3 (lower is better)
Translates to: QSARASRSAQVE*ACHRNSSLATA
Trigger: GGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
3UTR-3UTR CAA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTCTCGGTCTGCCCAGGTaGAGTGGGCCTGTCATAGGA +
Preference number: 3 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGLGLPR*SGPVIG
Trigger: TCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR TCA 72 bp CCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTaGCAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: PPGRNKPSLSVT*QQAARQLQWAW
Trigger: CCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR TCA 72 bp GTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATaGTGCCCAGGGCAGTGCTCTTGGGGAATATGCTTC +
Preference number: 3 (lower is better)
Translates to: VRGLAQLLAGGR*CPGQCSWGICF
Trigger: GAAGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR CCA 72 bp GGAACCCTACGAAGTCACCAAGTGGCCCTTCACTGCTaGCCAGCAGCCAGACAAGTGCCCACTCAGACAGCC +
Preference number: 3 (lower is better)
Translates to: GTLRSHQVALHC*PAARQVPTQTA
Trigger: GGCTGTCTGAGTGGGCACTTGTCTGGCTGCTGGCCAGCAGTGAAGGGCCACTTGGTGACTTCGTAGGGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR TCA 72 bp AGAGACGTGCTCAGATGCTCTGGGCTTTGCCTGGACTaGGAGCACCAGGGAAGCCTTCTGGGCCACGCCTTA +
Preference number: 3 (lower is better)
Translates to: RDVLRCSGLCLD*EHQGSLLGHAL
Trigger: TAAGGCGTGGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp AAGTCAGAGACGTGCTCAGATGCTCTGGGCTTTGCCTaGACTGAGAGCACCAGGGAAGCCTTCTGGGCCACG +
Preference number: 3 (lower is better)
Translates to: KSETCSDALGFA*TESTREAFWAT
Trigger: CGTGGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCTGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp TTAGCCAACTCACCACAGATGCTGGGCTGGCGCCTCTaGAGCAAGGCACCCCTCAATACCAACCTTCCCGAG +
Preference number: 3 (lower is better)
Translates to: LANSPQMLGWRL*SKAPLNTNLPE
Trigger: CTCGGGAAGGTTGGTATTGAGGGGTGCCTTGCTCCAGAGGCGCCAGCCCAGCATCTGTGGTGAGTTGGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTCATAGGAACAGCAGCTaGGCCACTGCCCACCCAGGT +
Preference number: 3 (lower is better)
Translates to: KGSQPALMWRWREEWLHVHRNSS*ATAHPG
Trigger: ACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTATG...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR TCA 72 bp CAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCTaGTGTGGCGGTGGCGTGAGGAATGGTTGCATGTTA +
Preference number: 3 (lower is better)
Translates to: QPPQQQRVPNQL*CGGGVRNGCML
Trigger: TAACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR TCA 72 bp CCCCTCCTCGCTGAGAGCCCCTCTCTCCTAAGAGGCTaGGCTGATTCATACCCTGCACCTACGACACTGGAT +
Preference number: 3 (lower is better)
Translates to: PLLAESPSLLRG*ADSYPAPTTLD
Trigger: ATCCAGTGTCGTAGGTGCAGGGTATGAATCAGCTCAGCCTCTTAGGAGAGAGGGGCTCTCAGCGAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp AGCAGCCAGACAAGTGCCCACTCAGACAGCCAGGAGTaGCAAAGGGGGACTGCTCAGCAGTTATTCCTGTCC +
Preference number: 3 (lower is better)
Translates to: SSQTSAHSDSQE*QRGTAQQLFLS
Trigger: GGACAGGAATAACTGCTGAGCAGTCCCCCTTTGCCACTCCTGGCTGTCTGAGTGGGCACTTGTCTGGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp GTTGCCACTGGAAGTCAGAGACGTGCTCAGATGCTCTaGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCT +
Preference number: 3 (lower is better)
Translates to: VATGSQRRAQML*ALPGLRAPGKP
Trigger: AGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCTGACTTCCAGTGGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp GTTAGCCCTCACCTACTGCAATCAGGTGGATACAGCTaGAGCCCTGGGGACAGGTCACTTGAACTGGCAGCA +
Preference number: 3 (lower is better)
Translates to: VSPHLLQSGGYS*SPGDRSLELAA
Trigger: TGCTGCCAGTTCAAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAGGTGAGGGCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp TCCCCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTaGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACT +
Preference number: 3 (lower is better)
Translates to: SPAAKGSQPALM*RWREEWLHVST
Trigger: AGTGCTAACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR GCA 72 bp GGAGAGGCCTGTTCAAGCAGGGAGGCTACTGGTATCTaGACACAACATGCAGATGAGCTCTACACCAGCCGA +
Preference number: 3 (lower is better)
Translates to: GEACSSREATGI*TQHADELYTSR
Trigger: TCGGCTGGTGTAGAGCTCATCTGCATGTTGTGTGCAGATACCAGTAGCCTCCCTGCTTGAACAGGCCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp GCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTaGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTT +
Preference number: 3 (lower is better)
Translates to: AAKGSQPALMWR*REEWLHVSTGF
Trigger: AAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR CCA 72 bp ATATGCAGCCACCTCCCTCAGGGCAATTCCTTGCCTTaGATCCTCACTGCACCTGCTTCACCAGCATCTTGG +
Preference number: 3 (lower is better)
Translates to: ICSHLPQGNSLP*ILTAPASPASW
Trigger: CCAAGATGCTGGTGAAGCAGGTGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGAGGGAGGTGGCTGCATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp AGCCGAGAGGAACAAGGCTTCAGTGCAGTTGTGTGCTaGGGACAGCAGGACTCGTGTTTAAGTGTCAGAGGC +
Preference number: 3 (lower is better)
Translates to: SREEQGFSAVVC*GQQDSCLSVRG
Trigger: GCCTCTGACACTTAAACACGAGTCCTGCTGTCCCCAGCACACAACTGCACTGAAGCCTTGTTCCTCTCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp GGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCCATAGGAACAGCAGCTaGGCCACTGCCCACCCAGGT +
Preference number: 3 (lower is better)
Translates to: GCHLPCASPSKHQPHLSIHRNSS*ATAHPG
Trigger: ACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTATG...GATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCTGGCGTGAGGAATGGTaGCATGTTAGCACTGGCTTT +
Preference number: 3 (lower is better)
Translates to: SALGEYASSLPSSKGFPTWREEW*HVSTGF
Trigger: AAAGCCAGTGCTAACATGCAACCATTCCTCACGCCA...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp GGCTGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTTGAGGCGAGAGGTATTCCTGAGACACACCTaGCCCTTGGTCAGGGAACTG +
Preference number: 3 (lower is better)
Translates to: GCPEIRAAAKNGALRREVFLRHT*PLVREL
Trigger: CAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAA...TACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR TCA 72 bp CAGGGAGGCTACTGGTATCTGCACACAACATGCAGATaGGCTCTACACCAGCCGAGAGGAACAAGGCTTCAG +
Preference number: 3 (lower is better)
Translates to: QGGYWYLHTTCR*ALHQPRGTRLQ
Trigger: CTGAAGCCTTGTTCCTCTCGGCTGGTGTAGAGCTCATCTGCATGTTGTGTGCAGATACCAGTAGCCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp TCAGGGCAATTCCTTGCCTTGGATCCTCACTGCACCTaGTTCACCAGCATCTTGGCTCTTCATCTCCCTACC +
Preference number: 3 (lower is better)
Translates to: SGQFLALDPHCT*FTSILALHLPT
Trigger: GGTAGGGAGATGAAGAGCCAAGATGCTGGTGAAGCAGGTGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp ACCAGCCGAGAGGAACAAGGCTTCAGTGCAGTTGTGTaGTGGGGACAGCAGGACTCGTGTTTAAGTGTCAGA +
Preference number: 3 (lower is better)
Translates to: TSREEQGFSAVV*WGQQDSCLSVR
Trigger: TCTGACACTTAAACACGAGTCCTGCTGTCCCCAGCACACAACTGCACTGAAGCCTTGTTCCTCTCGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp CACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGGCAGAGATCCATGATTGGTTaGGTTTGGGAACGGGGGATT +
Preference number: 3 (lower is better)
Translates to: HLALGQGTATKGKRNTGQRSMIG*VWERGI
Trigger: AATCCCCCGTTCCCAAACCAAACCAATCATGGATCT...CTGCCCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR TCA 72 bp TACACAGACTGGGCTGCCTGGCGGACTGAGGGTAGCTaGGATGGCACATTCTCCTTCCACAGAAGAATGATT +
Preference number: 3 (lower is better)
Translates to: YTDWAAWRTEGS*DGTFSFHRRMI
Trigger: AATCATTCTTCTGTGGAAGGAGAATGTGCCATCTCAGCTACCCTCAGTCCGCCAGGCAGCCCAGTCTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp CCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTaGCTCTCCCTCCAAACATCAGCCTCATTTATCCAT +
Preference number: 3 (lower is better)
Translates to: PKEAPKGMPFTV*LSLQTSASFIH
Trigger: ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR GCA 72 bp ATCCACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATaGCATTTACCGTGTGCCTCTCCCTCCAAACATCAG +
Preference number: 3 (lower is better)
Translates to: IHFPFPKRRLRG*HLPCASPSKHQ
Trigger: CTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
3UTR TCA 72 bp GGCCCCAGAGAACAGTATGAAAACCGTGGAAGTAGGTaGCCTAAGGTCCCTTCCGCCTCTAAACATCAGGAA +
Preference number: 3 (lower is better)
Translates to: GPREQYENRGSR*PKVPSASKHQE
Trigger: TTCCTGATGTTTAGAGGCGGAAGGGACCTTAGGTCACCTACTTCCACGGTTTTCATACTGTTCTCTGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp ACACCCTGTTTCACCACGTTCAAACTGTGTTGCCACTaGAAGTCAGAGACGTGCTCAGATGCTCTGGGCTTT +
Preference number: 3 (lower is better)
Translates to: TPCFTTFKLCCH*KSETCSDALGF
Trigger: AAAGCCCAGAGCATCTGAGCACGTCTCTGACTTCCAGTGGCAACACAGTTTGAACGTGGTGAAACAGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp ACGCCCTTCCTAGGCCATGCCAGTGTTTTAATTTGCTaGAGACTAGCCCACAGGAACAATAGTGGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: TPFLGHASVLIC*RLAHRNNSGCV
Trigger: CACACAGCCACTATTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAGGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp CTTCAGACCAAATTCCCTCTACAGCCTGAAGCAAGCTaGCCTTGCCCACAGAGAACTGCCTTTCTCCATATG +
Preference number: 3 (lower is better)
Translates to: LQTKFPLQPEAS*PCPQRTAFLHM
Trigger: CATATGGAGAAAGGCAGTTCTCTGTGGGCAAGGCCAGCTTGCTTCAGGCTGTAGAGGGAATTTGGTCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp AGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATaGATAGTCACTTTGCTCCACAGCCCAGGGTCCACT +
Preference number: 3 (lower is better)
Translates to: SWDSCHIIQKSK*IVTLLHSPGST
Trigger: AGTGGACCCTGGGCTGTGGAGCAAAGTGACTATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTATGGCTGAGGAAGAGATaGTTTAGGGGACCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLWLRKR*FRGPGP
Trigger: GGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCA...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR TCA 72 bp CGACACTGGATTATAGCACTGGCAGGAGAACCACAGTaGCAACCCAAATCCAGGGGCTCAACAACTGTTTGT +
Preference number: 3 (lower is better)
Translates to: RHWIIALAGEPQ*QPKSRGSTTVC
Trigger: ACAAACAGTTGTTGAGCCCCTGGATTTGGGTTGTCACTGTGGTTCTCCTGCCAGTGCTATAATCCAGTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp AGAACTACACCCTGTTTCACCACGTTCAAACTGTGTTaGCACTGGAAGTCAGAGACGTGCTCAGATGCTCTG +
Preference number: 3 (lower is better)
Translates to: RTTPCFTTFKLC*HWKSETCSDAL
Trigger: CAGAGCATCTGAGCACGTCTCTGACTTCCAGTGGCAACACAGTTTGAACGTGGTGAAACAGGGTGTAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp TGTGGAGAGAGGGCGGGAAGGAGACCTCTAGTTGACTaGATAACCCAATCACATCTAATTCCATTTCTGCCC +
Preference number: 3 (lower is better)
Translates to: CGERAGRRPLVD*ITQSHLIPFLP
Trigger: GGGCAGAAATGGAATTAGATGTGATTGGGTTATGCAGTCAACTAGAGGTCTCCTTCCCGCCCTCTCTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp GATGAAGACAACCTGGCAGCTCAAAGTCACAGTTCATaGCCTGTTGCTTCAGACCAAATTCCCTCTACAGCC +
Preference number: 3 (lower is better)
Translates to: DEDNLAAQSHSS*PVASDQIPSTA
Trigger: GGCTGTAGAGGGAATTTGGTCTGAAGCAACAGGGCATGAACTGTGACTTTGAGCTGCCAGGTTGTCTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp CATGGCCTCCCCAAGAGGGAGGGCAGGCACAAAACATaGATGCCAAGATTACAAAGCACAAACCTAACTCTT +
Preference number: 3 (lower is better)
Translates to: HGLPKREGRHKT*MPRLQSTNLTL
Trigger: AAGAGTTAGGTTTGTGCTTTGTAATCTTGGCATCCATGTTTTGTGCCTGCCCTCCCTCTTGGGGAGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp TTCAAATCAGCCCTCATTCCCAAAAGATCAATAGAGGTCAGGGCTAGAGTTAACGGGCAATTCCTTGCCTaGGATCCTCACTGCACCTGC +
Preference number: 3 (lower is better)
Translates to: FKSALIPKRSIEVRARVNGQFLA*DPHCTC
Trigger: GCAGGTGCAGTGAGGATCCAAGGCAAGGAATTGCCC...GTTAACTCTAGCCCTGACCTCTATTGATCTTTTGGGAATGAGGGCTGATTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR TCA 72 bp TTCAGAGAAGGAGGAATAGCTGCCAGGTCAGATCCCTaGCTGCTTTGCCCTCTTTTAGCCTGGGAGATTTTA +
Preference number: 3 (lower is better)
Translates to: FREGGIAARSDP*LLCPLLAWEIL
Trigger: TAAAATCTCCCAGGCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp TACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTaGGAACGGGGGATTTCTGGAACCCTGAGTCTGGAT +
Preference number: 3 (lower is better)
Translates to: YPLKGRSMIGLV*ERGISGTLSLD
Trigger: ATCCAGACTCAGGGTTCCAGAAATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp AGGCTGATTCTACCCCTTAAAGGGAAGATCCATGATTaGTTTGGTTTGGGAACGGGGGATTTCTGGAACCCT +
Preference number: 3 (lower is better)
Translates to: RLILPLKGKIHD*FGLGTGDFWNP
Trigger: AGGGTTCCAGAAATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAATCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCAGACTGCATAAACATTTaGACCAGTCTGTACTCATGC +
Preference number: 3 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSDCINI*TSLYSC
Trigger: GCATGAGTACAGACTGGTCAAAATGTTTATGCAGTC...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp GCCTGGGAGATTTTAGGAGCAAAATCACTGAGGAAATaGGTTCAGTGCTTGAACATCATGGTGAGGCTCCTT +
Preference number: 3 (lower is better)
Translates to: AWEILGAKSLRK*VQCLNIMVRLL
Trigger: AAGGAGCCTCACCATGATGTTCAAGCACTGAACGCATTTCCTCAGTGATTTTGCTCCTAAAATCTCCCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp CAACTTAAATGGTCACCGAGGCTACAGCAGAACCAATaGTGTTACAATAGGCAAGCACTACTGTCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: QLKWSPRLQQNQ*CYNRQALLSAA
Trigger: TGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCTGCTGTAGCCTCGGTGACCATTTAAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp GCTGTGTGTAGACACGATGGCCATGGCACACACTCATaGTTTTCACAACTTCATATGAATACACAGACTGGG +
Preference number: 3 (lower is better)
Translates to: AVCRHDGHGTHS*FSQLHMNTQTG
Trigger: CCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR TCA 72 bp AAGAAAGGTAACGAGAGTGCCAGGATAGGAAAGTTCTaGGATGAAGACAACCTGGCAGCTCAAAGTCACAGT +
Preference number: 3 (lower is better)
Translates to: KKGNESARIGKF*DEDNLAAQSHS
Trigger: ACTGTGACTTTGAGCTGCCAGGTTGTCTTCATCTCAGAACTTTCCTATCCTGGCACTCTCGTTACCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp ATTTTAGGAGCAAAATCACTGAGGAAATGCGTTCAGTaGTTGAACATCATGGTGAGGCTCCTTGCCAAGGTC +
Preference number: 3 (lower is better)
Translates to: ILGAKSLRKCVQ*LNIMVRLLAKV
Trigger: GACCTTGGCAAGGAGCCTCACCATGATGTTCAAGCACTGAACGCATTTCCTCAGTGATTTTGCTCCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp TTAACTTCAACAGGCATGGGATCTCCCAGCCTCATGTaGAAGCAGGCAAGTATATCAGGATATGCCTTTAAT +
Preference number: 3 (lower is better)
Translates to: LTSTGMGSPSLM*KQASISGYAFN
Trigger: ATTAAAGGCATATCCTGATATACTTGCCTGCTTGCACATGAGGCTGGGAGATCCCATGCCTGTTGAAGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTCAGAAGAATGATTTCTaGTTTTCAAACGCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWAQKNDF*FSNACW
Trigger: CCAGCAGGCGTTTGAAAACAAGAAATCATTCTTCTG...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTAGCTCAGCTGGCTCTTaGTGTTTGTATACTTTAGGT +
Preference number: 3 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTISSAGS*CLYTLG
Trigger: ACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCT...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAGGAAAGTTTCCTTTTTaGAAGGCAGAGGAGGAGGAT +
Preference number: 3 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKGKFPF*KAEEED
Trigger: ATCCTCCTCCTCTGCCTTCAAAAAAGGAAACTTTCC...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR-3UTR CAA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAGACTGCATAAACATTTaGACCAGTCTGTACTCATGC +
Preference number: 3 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKDCINI*TSLYSC
Trigger: GCATGAGTACAGACTGGTCAAAATGTTTATGCAGTC...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR TCA 72 bp CAACAGTGCTGTAGGGTAAAGAAAAATCTACCTCTGTaGAGAGCAAGAACTAGTATTGAAGTGACTAGATGC +
Preference number: 3 (lower is better)
Translates to: QQCCRVKKNLPL*RARTSIEVTRC
Trigger: GCATCTAGTCACTTCAATACTAGTTCTTGCTCTTCACAGAGGTAGATTTTTCTTTACCCTACAGCACTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp GTGACAACCCAAATCCAGGGGCTCAACAACTGTTTGTaGGTGAAAATGACAGATTTATTCAACTTAAATGGT +
Preference number: 3 (lower is better)
Translates to: VTTQIQGLNNCL*VKMTDLFNLNG
Trigger: ACCATTTAAGTTGAATAAATCTGTCATTTTCACCCACAAACAGTTGTTGAGCCCCTGGATTTGGGTTGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CCA 72 bp CTCCTCTTTAGGAGAAAAGGGTTATATGTACAGCTATaGAGAGTTACGGTTCCTCCTTTAACAAAGGAAAAT +
Preference number: 3 (lower is better)
Translates to: LLFRRKGLYVQL*RVTVPPLTKEN
Trigger: ATTTTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTTTCTCCTAAAGAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR GCA 72 bp AAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAATaGTACCATGTGGAACACTCAACTTTATTTGCTTTA +
Preference number: 3 (lower is better)
Translates to: KPQGKELGSVSK*YHVEHSTLFAL
Trigger: TAAAGCAAATAAAGTTGAGTGTTCCACATGGTAGCATTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGGCGCTGGGCAGCGCCTaGGCCGCTGGGACGTCTCGT +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRALGSA*AAGTSR
Trigger: ACGAGACGTCCCAGCGGCTCAGGCGCTGCCCAGCGC...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCGCGCTGGGCAGCGCCTaGGCCGCTGGGACGTCTCGT +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSAALGSA*AAGTSR
Trigger: ACGAGACGTCCCAGCGGCTCAGGCGCTGCCCAGCGC...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCCCCCCGGCACTCTGGTaGGCTTCCCTAGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAPPALW*ASLGCR
Trigger: CCGACAGCCTAGGGAAGCCCACCAGAGTGCCGGGGG...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCCACGGGGGACAACATaGCGGCTACCCACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVPRGTT*RLPTPS
Trigger: GCTGGGAGTGGGTAGCCGTCATGTTGTCCCCCGTGG...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCCCCCCGGCACTCTGGTaGGCTTCCCTAGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPPPALW*ASLGCR
Trigger: CCGACAGCCTAGGGAAGCCCACCAGAGTGCCGGGGG...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
66% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGCAGTGGGCGGCCAGGTaGTCAGGAAGCCAACGGGTC +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRQWAAR*SGSQRV
Trigger: GACCCGTTGGCTTCCTGACCACCTGGCCGCCCACTG...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCCGCCCCCTCCTCGCTaGGAGCCCCTCTCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSPPPPR*EPLSPK
Trigger: CTTAGGAGAGAGGGGCTCTCAGCGAGGAGGGGGCGG...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCGAGCGCCGGTGCTCCTaGCACTTCTCGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAERRCS*HFSFRL
Trigger: CAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTC...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGGAGCGCCGGTGCTCCTaGCACTTCTCGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRERRCS*HFSFRL
Trigger: CAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTC...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCCAGGGCCAGCCAGGCTaGTCAGCTCTAGTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPQGQPG*SALVSA
Trigger: GGCGCTCACTAGAGCTGAGCAGCCTGGCTGGCCCTG...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGGCCAATGCCACAATCTaGGGGGTGCGGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGANATI*GVRSQP
Trigger: TGGCTGGGACCGCACCCCCCAGATTGTGGCATTGGC...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCGCTGGTGCCTGGGGCTaGGTATGGTGCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAAGAWG*VWCTAV
Trigger: GACAGCTGTGCACCATACCCAGCCCCAGGCACCAGC...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGGGGGATCATCAGGGCTaGTGCCTGGGGCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRGDHQG*CLGLGM
Trigger: CATACCCAGCCCCAGGCACCAGCCCTGATGATCCCC...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCCCGGCACTCTGGTaGGCTTCCCTAGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLPPALW*ASLGCR
Trigger: CCGACAGCCTAGGGAAGCCCACCAGAGTGCCGGGGG...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCATCATCGTCCAGGTaGCTGCGGGAAGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGPSSSR*LREGWS
Trigger: CGACCAGCCTTCCCGCAGCCACCTGGACGATGATGG...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCCAGTGGGCGGCCAGGTaGTCAGGAAGCCAACGGGTC +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPQWAAR*SGSQRV
Trigger: GACCCGTTGGCTTCCTGACCACCTGGCCGCCCACTG...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGGGGAACGTGTCAGGCTaGGAGTGCTGCCAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGGNVSG*ECCQGK
Trigger: CTTCCCTTGGCAGCACTCTCAGCCTGACACGTTCCC...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGGCCCACCCAGGTCACTaGGCTTCAGTTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRAHPGH*ASVGSG
Trigger: GCCACTTCCAACTGAAGCTCAGTGACCTGGGTGGGC...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGGTTCCCAACCAGCTCTaGTGTGGCGGTGGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWVPNQL*CGGGVR
Trigger: CCTCACGCCACCGCCACATCAGAGCTGGTTGGGAAC...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTCCGCCCCCTCCTCGCTaGGAGCCCCTCTCTCCTAAG +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATPPPPR*EPLSPK
Trigger: CTTAGGAGAGAGGGGCTCTCAGCGAGGAGGGGGCGG...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCGAGCGCCGGTGCTCCTaGCACTTCTCGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPERRCS*HFSFRL
Trigger: CAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTC...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGACATCGTCCAGGTGGCTaGGGGAAGGCTGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SRSQISILLALTTILPPGHRPGG*GKAGRG
Trigger: GCCCCGACCAGCCTTCCCGCAGCCACCTGGACGATG...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGCAGCAGCTTGGCCACTaGCCACCCAGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEQQLGH*PPRSLS
Trigger: GCTCAGTGACCTGGGTGGGCAGTGGCCAAGCTGCTG...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCTCCCAGCCCCTCGCCTaGCTCAAAGGAGCATCCACT +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWASQPLA*LKGAST
Trigger: AGTGGATGCTCCTTTGAGGCAGGCGAGGGGCTGGGA...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGTCCCAGCCCCTCGCCTaGCTCAAAGGAGCATCCACT +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGSQPLA*LKGAST
Trigger: AGTGGATGCTCCTTTGAGGCAGGCGAGGGGCTGGGA...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTGTCGTCCACAGGGGTaGTTGGGGATGGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWCRPQG*LGMGRA
Trigger: TGCCCTGCCCATCCCCAACCACCCCTGTGGACGACA...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCTGTCGTCCACAGGGGTaGTTGGGGATGGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPCRPQG*LGMGRA
Trigger: TGCCCTGCCCATCCCCAACCACCCCTGTGGACGACA...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCGCCTGGGGCTGGGTATaGTGCACAGCTGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTAWGWV*CTAVVH
Trigger: GTGGACGACAGCTGTGCACCATACCCAGCCCCAGGC...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCGCTGGTGCCTGGGGCTaGGTATGGTGCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPAGAWG*VWCTAV
Trigger: GACAGCTGTGCACCATACCCAGCCCCAGGCACCAGC...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCATCAGGGCTGGTGCCTaGGGCTGGGTATGGTGCACA +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAIRAGA*GWVWCT
Trigger: TGTGCACCATACCCAGCCCCAGGCACCAGCCCTGAT...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCGGGGATCATCAGGGCTaGTGCCTGGGGCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPGDHQG*CLGLGM
Trigger: CATACCCAGCCCCAGGCACCAGCCCTGATGATCCCC...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCACCACAGACCCCACTTaGGGCCTCTCGACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWATTDPT*GLSTRL
Trigger: AAGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGT...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCAAGTGCTACACAGCCTaGCCCAGGAAAGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAKCYTA*PRKAAP
Trigger: GGGGGCTGCTTTCCTGGGCCAGGCTGTGTAGCACTT...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGGTGGCCCTTCACTGCTaGCCAGCAGCCAGACAAGTG +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVVALHC*PAARQV
Trigger: CACTTGTCTGGCTGCTGGCCAGCAGTGAAGGGCCAC...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCGTGGCCCTTCACTGCTaGCCAGCAGCCAGACAAGTG +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAVALHC*PAARQV
Trigger: CACTTGTCTGGCTGCTGGCCAGCAGTGAAGGGCCAC...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGCAGCAGAGTCAAGCATaGCCTCCCCAAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRQQSQA*PPQEGG
Trigger: CCCTCCCTCTTGGGGAGGCCATGCTTGACTCTGCTG...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTCTGGTGCCTGTAGATaGCGGCAGGGATGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWSGACR*RQGCAS
Trigger: GGAAGCGCATCCCTGCCGTCATCTACAGGCACCAGA...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCTCTGGTGCCTGTAGATaGCGGCAGGGATGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPSGACR*RQGCAS
Trigger: GGAAGCGCATCCCTGCCGTCATCTACAGGCACCAGA...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCTGGTGCCTGTAGATaGCGGCAGGGATGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVESGACR*RQGCAS
Trigger: GGAAGCGCATCCCTGCCGTCATCTACAGGCACCAGA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCCCCGGATCTGGCATCTaGGTGCACAGCAACCGCAGA +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTPGSGI*VHSNRR
Trigger: TCTGCGGTTGCTGTGCACTCAGATGCCAGATCCGGG...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCGCCTGCCCGAAGAAGTaGCCACACGGAACATGTCCG +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPACPKK*PHGTCP
Trigger: CGGACATGTTCCGTGTGGTCACTTCTTCGGGCAGGC...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGGGGAACGTGTCAGGCTaGGAGTGCTGCCAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWGNVSG*ECCQGK
Trigger: CTTCCCTTGGCAGCACTCTCAGCCTGACACGTTCCC...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTACCTGGGGGCTGCTCTaGGGCCCTGTTTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGTWGLL*GPVFSL
Trigger: GAGACTGAAAACAGGGCCTCAGAGCAGCCCCCAGGT...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCACCTGGGGGCTGCTCTaGGGCCCTGTTTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTTWGLL*GPVFSL
Trigger: GAGACTGAAAACAGGGCCTCAGAGCAGCCCCCAGGT...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTACCTGGGGGCTGCTCTaGGGCCCTGTTTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVTWGLL*GPVFSL
Trigger: GAGACTGAAAACAGGGCCTCAGAGCAGCCCCCAGGT...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGGTTCCCAACCAGCTCTaGTGTGGCGGTGGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWVPNQL*CGGGVR
Trigger: CCTCACGCCACCGCCACATCAGAGCTGGTTGGGAAC...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGGGCTTTGCCTGGACTaGGAGCACCAGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVGLCLD*EHQGSL
Trigger: AAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCC...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGGAGCGCCGGTGCTCCTaGCACTTCTCGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWERRCS*HFSFRL
Trigger: CAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTC...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGTCTAGTGAGCGCCGGTaGTCCTGCCACTTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLSSERR*SCHFSF
Trigger: GAACGAGAAGTGGCAGGAGCACCGGCGCTCACTAGA...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGTCTAGTGAGCGCCGGTaGTCCTGCCACTTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGSSERR*SCHFSF
Trigger: GAACGAGAAGTGGCAGGAGCACCGGCGCTCACTAGA...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGTCCCCATTGGCGCAATaGCCATTGGGTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLSPLAQ*PLGVGY
Trigger: GTACCCCACACCCAATGGGCATTGCGCCAATGGGGA...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCAAGGCTGGTCGGGGCTaGTGGTTGCAGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTKAGRG*WLQMAF
Trigger: GAAGGCCATCTGCAACCAGCAGCCCCGACCAGCCTT...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTCACGGTCAGTGTCCCTaGAGTGGTGCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVHGQCP*SGASCW
Trigger: CCAGCAGGAAGCACCACTGCAGGGACACTGACCGTG...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGCAGCAGCTTGGCCACTaGCCACCCAGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWQQLGH*PPRSLS
Trigger: GCTCAGTGACCTGGGTGGGCAGTGGCCAAGCTGCTG...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGCTCCCATTCCAAAGTaGACGGGCCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVAPIPK*TGLSVC
Trigger: GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGC...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCGCTCCCATTCCAAAGTaGACGGGCCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTAPIPK*TGLSVC
Trigger: GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGC...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTCGCAGCCTCCTCCTTTaGCTCGGTTTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVRSLLL*LGLPQQ
Trigger: CTGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCG...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTCGCAGCCTCCTCCTTTaGCTCGGTTTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGRSLLL*LGLPQQ
Trigger: CTGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCG...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCCGCAGCCTCCTCCTTTaGCTCGGTTTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTRSLLL*LGLPQQ
Trigger: CTGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCG...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGGCCAATGCCACAATCTaGGGGGTGCGGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWANATI*GVRSQP
Trigger: TGGCTGGGACCGCACCCCCCAGATTGTGGCATTGGC...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACATCAGGGCTGGTGCCTaGGGCTGGGTATGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNIRAGA*GWVWCT
Trigger: TGTGCACCATACCCAGCCCCAGGCACCAGCCCTGAT...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGGATCATCAGGGCTaGTGCCTGGGGCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSGDHQG*CLGLGM
Trigger: CATACCCAGCCCCAGGCACCAGCCCTGATGATCCCC...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGGGGGATCATCAGGGCTaGTGCCTGGGGCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWGDHQG*CLGLGM
Trigger: CATACCCAGCCCCAGGCACCAGCCCTGATGATCCCC...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGAACTTCTCGTTCAGGCTaGGGTCGCTGCAGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: SRSQISILLALTTILPPGTSRSG*GRCSAG
Trigger: GCCGGCGCTGCAGCGACCCCAGCCTGAACGAGAAGT...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTACTTCTCGTTCAGGCTaGGGTCGCTGCAGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATTSRSG*GRCSAG
Trigger: GCCGGCGCTGCAGCGACCCCAGCCTGAACGAGAAGT...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCCCCCGGCACTCTGGTaGGCTTCCCTAGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNPPALW*ASLGCR
Trigger: CCGACAGCCTAGGGAAGCCCACCAGAGTGCCGGGGG...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGGGTGTGGGGTACATCTaGAGGGTGCTAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVGVGYI*RVLRPG
Trigger: CCCAGGTCTTAGCACCCTCCAGATGTACCCCACACC...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTCCATCATCGTCCAGGTaGCTGCGGGAAGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGPSSSR*LREGWS
Trigger: CGACCAGCCTTCCCGCAGCCACCTGGACGATGATGG...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTCAGTGGGCGGCCAGGTaGTCAGGAAGCCAACGGGTC +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATQWAAR*SGSQRV
Trigger: GACCCGTTGGCTTCCTGACCACCTGGCCGCCCACTG...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCTCTGGTGCCTGTAGATaGCGGCAGGGATGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCSGACR*RQGCAS
Trigger: GGAAGCGCATCCCTGCCGTCATCTACAGGCACCAGA...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCGTCCACAGCGGGCAATaGCAGCTCCATTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPVHSGQ*QLHCSG
Trigger: ACCAGAGCAATGGAGCTGTCATTGCCCGCTGTGGAC...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCCCGGATCTGGCATCTaGGTGCACAGCAACCGCAGA +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSPGSGI*VHSNRR
Trigger: TCTGCGGTTGCTGTGCACTCAGATGCCAGATCCGGG...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTCAGCTGACGGCTCAGTaGGTCCTTGCTCCTACCAGC +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGQLTAQ*VLAPTS
Trigger: GCTGGTAGGAGCAAGGACTCACTGAGCCGTCAGCTG...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGTGCAGATGGCCTTCCTaGGTGGCTATGCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLCRWPS*VAMQPL
Trigger: AAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCA...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCTGGCCTGACTCAATCTaGCGCAGGCGCTGTTGGATC +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTWPDSI*RRRCWI
Trigger: GATCCAACAGCGCCTGCGTCAGATTGAGTCAGGCCA...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTTTCCTGCTGGTGGCCTaGCTCAATCTGACGCAGGCG +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGFLLVA*LNLTQA
Trigger: CGCCTGCGTCAGATTGAGTCAGGCCACCAGCAGGAA...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCCCTGTGCTGGCTGAGGAAGAGATTGTTTAGGGGACCAGGCCCCAGAATGGGGCTTCCACTCCCCGACTaGAGGGGCCAGAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: SLCWLRKRLFRGPGPRMGLPLPD*RGQSTG
Trigger: GCCAGTACTCTGGCCCCTTCAGTCGGGGAGTGGAAG...CCCCATTCTGGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCAGCACAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCATTCCCTCTACAGCCTaGAGCAAGCTGGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPIPSTA*SKLALP
Trigger: GGGCAAGGCCAGCTTGCTTCAGGCTGTAGAGGGAAT...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTGGGGCTGGGTATGGTaGACAGCTGTCGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWWGWVW*TAVVHR
Trigger: CCTGTGGACGACAGCTGTGCACCATACCCAGCCCCA...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGGATCATCAGGGCTGGTaGCTGGGGCTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWDHQGW*LGLGMV
Trigger: CACCATACCCAGCCCCAGGCACCAGCCCTGATGATC...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGGATCATCAGGGCTGGTaGCTGGGGCTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLDHQGW*LGLGMV
Trigger: CACCATACCCAGCCCCAGGCACCAGCCCTGATGATC...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCAGGGCCAGCCAGGCTaGTCAGCTCTAGTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPAQGQPG*SALVSA
Trigger: GGCGCTCACTAGAGCTGAGCAGCCTGGCTGGCCCTG...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTCTCAGCTACTCCGGCTaGAACAGAAAGCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVLSYSG*NRKLGT
Trigger: GGTGCCGAGCTTTCTGTTGCAGCCGGAGTAGCTGAG...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCCTCAGCTACTCCGGCTaGAACAGAAAGCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPLSYSG*NRKLGT
Trigger: GGTGCCGAGCTTTCTGTTGCAGCCGGAGTAGCTGAG...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGCTGTATCTCAATGCCTaGCCTGTGGGCAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRLYLNA*PVGRFL
Trigger: GAGGAACCTGCCCACAGGGCAGGCATTGAGATACAG...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCCCAAGGGAAGTCCTATaGACCACAGACCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAPREVL*TTDPTW
Trigger: CCAAGTGGGGTCTGTGGTGCATAGGACTTCCCTTGG...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTTCCCCATTGGCGCAATaGCCATTGGGTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVSPLAQ*PLGVGY
Trigger: GTACCCCACACCCAATGGGCATTGCGCCAATGGGGA...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCTCCCCATTGGCGCAATaGCCATTGGGTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTSPLAQ*PLGVGY
Trigger: GTACCCCACACCCAATGGGCATTGCGCCAATGGGGA...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCAAGGCTGGTCGGGGCTaGTGGTTGCAGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SDALGFAWTESTREAFWAKAGRG*WLQMAF
Trigger: GAAGGCCATCTGCAACCAGCAGCCCCGACCAGCCTT...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTAAGGCTGGTCGGGGCTaGTGGTTGCAGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSKAGRG*WLQMAF
Trigger: GAAGGCCATCTGCAACCAGCAGCCCCGACCAGCCTT...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTGCAGTGGTGCTTCCTaGTGGCAAGCCAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWCSGAS*WQARRH
Trigger: GTGCCTTCTGGCTTGCCAGCAGGAAGCACCACTGCA...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGCAGTGGTGCTTCCTaGTGGCAAGCCAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVECSGAS*WQARRH
Trigger: GTGCCTTCTGGCTTGCCAGCAGGAAGCACCACTGCA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCGCTCCCATTCCAAAGTaGACGGGCCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SDALGFAWTESTREAFWAAPIPK*TGLSVC
Trigger: GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGC...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGCAATTCCTGCAGTGGTaGTTCCTGCTGGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLQFLQW*FLLASQ
Trigger: CTGGCTTGCCAGCAGGAAGCACCACTGCAGGAATTG...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCCCACCAGCTAACCTCTaGCTGTCCACAGCGGGCAAT +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPPPANL*LSTAGN
Trigger: ATTGCCCGCTGTGGACAGCCAGAGGTTAGCTGGTGG...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCACTTCTCGTTCAGGCTaGGGTCGCTGCAGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLTSRSG*GRCSAG
Trigger: GCCGGCGCTGCAGCGACCCCAGCCTGAACGAGAAGT...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGTCAATGCCTGCCCTGTaGGCAGGTTCCTCTACTCCA +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVSMPAL*AGSSTP
Trigger: TGGAGTAGAGGAACCTGCCCACAGGGCAGGCATTGA...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGACCACAGACCCCACTTaGGGCCTCTCGACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRTTDPT*GLSTRL
Trigger: AAGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGT...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCGGTGTGGGGTACATCTaGAGGGTGCTAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPGVGYI*RVLRPG
Trigger: CCCAGGTCTTAGCACCCTCCAGATGTACCCCACACC...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGTGGCGCAATGCCCATTaGGTGTGGGGTACATCTGGA +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVWRNAH*VWGTSG
Trigger: TCCAGATGTACCCCACACCCAATGGGCATTGCGCCA...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGGATGGCCTTCCTGAGTaGCTATGCAGCCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVDGLPE*LCSHLW
Trigger: CCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATC...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCGAGCTGGTCAGGTACTaGCTCTCCAGGCGACTCTTC +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTELVRY*LSRRLF
Trigger: GAAGAGTCGCCTGGAGAGCCAGTACCTGACCAGCTC...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACGAGCTGGTCAGGTACTaGCTCTCCAGGCGACTCTTC +
Preference number: 4 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNELVRY*LSRRLF
Trigger: GAAGAGTCGCCTGGAGAGCCAGTACCTGACCAGCTC...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTGAGCTGGTCAGGTACTaGCTCTCCAGGCGACTCTTC +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGELVRY*LSRRLF
Trigger: GAAGAGTCGCCTGGAGAGCCAGTACCTGACCAGCTC...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCAGTGTCCCTGCAGTaGTGCTTCCTGCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVESVSLQ*CFLLAS
Trigger: GCTTGCCAGCAGGAAGCACCACTGCAGGGACACTGA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGAAGAGTGAAGGCCTCTaGGGAGCTCTGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLKSEGL*GALSRS
Trigger: TGACCTGCTCAGAGCTCCCCAGAGGCCTTCACTCTT...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGCAGCCTGAAGCAAGCTaGCCTTGCCCACAGAGAACT +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRQPEAS*PCPQRT
Trigger: AGTTCTCTGTGGGCAAGGCCAGCTTGCTTCAGGCTG...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGAGTGCAGTTGTGTGCTaGGGACAGCAGGACTCGTGT +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLSAVVC*GQQDSC
Trigger: ACACGAGTCCTGCTGTCCCCAGCACACAACTGCACT...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTAGCTTTGAATGGGCCTaGAGGCTCCCTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVSFEWA*RLPLHE
Trigger: CTCGTGGAGAGGGAGCCTCCAGGCCCATTCAAAGCT...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGAATTGGAAAGGGCAATaGTGGCATCCTCGGCACGGC +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVENWKGQ*WHPRHG
Trigger: GCCGTGCCGAGGATGCCATCATTGCCCTTTCCAATT...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCGTCCACAGCGGGCAATaGCAGCTCCATTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSAVHSGQ*QLHCSG
Trigger: ACCAGAGCAATGGAGCTGTCATTGCCCGCTGTGGAC...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCCCCGGATCTGGCATCTaGGTGCACAGCAACCGCAGA +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSPGSGI*VHSNRR
Trigger: TCTGCGGTTGCTGTGCACTCAGATGCCAGATCCGGG...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCCGAGTTCTCCCCATaGCCACACCGGTCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVESEFSP*PHRSAN
Trigger: ATTTGCTGACCGGTGTGGTCATGGGGAGAACTCGGA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGGTGAAGTCCAATGGCTaGGGCCTCAGGTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEVKSNG*GLRCLP
Trigger: AGGAAGACACCTGAGGCCTCAGCCATTGGACTTCAC...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCGTGAAGTCCAATGGCTaGGGCCTCAGGTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTVKSNG*GLRCLP
Trigger: AGGAAGACACCTGAGGCCTCAGCCATTGGACTTCAC...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCAGTTCTGGGTCTTGGTaGAGTCCAATGGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPSSGSW*SPMAEA
Trigger: GGCCTCAGCCATTGGACTTCACCAAGACCCAGAACT...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACTGCAGATGGCCTTCCTaGGTGGCTATGCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNCRWPS*VAMQPL
Trigger: AAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCA...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGTGGCCTGACTCAATCTaGCGCAGGCGCTGTTGGATC +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRWPDSI*RRRCWI
Trigger: GATCCAACAGCGCCTGCGTCAGATTGAGTCAGGCCA...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTGTTCCCAACCAGCTCTaGTGTGGCGGTGGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASVPNQL*CGGGVR
Trigger: CCTCACGCCACCGCCACATCAGAGCTGGTTGGGAAC...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCCCACGGGGGACAACATaGCGGCTACCCACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCPRGTT*RLPTPS
Trigger: GCTGGGAGTGGGTAGCCGTCATGTTGTCCCCCGTGG...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCTTCCACTCCCCGACTaGAGGGGCCAGAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPALPLPD*RGQSTG
Trigger: GCCAGTACTCTGGCCCCTTCAGTCGGGGAGTGGAAG...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTGCAGGAGAACCACAGTaGCAACCCAAATCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGAGEPQ*QPKSRG
Trigger: GCCCCTGGATTTGGGTTGTCACTGTGGTTCTCCTGC...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCTCTGATTGGCCTGGATaGACTCAAGGCTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTSDWPG*TQGCAE
Trigger: CTCGGCACAGCCTTGAGTGCATCCAGGCCAATCAGA...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCTCTGATTGGCCTGGATaGACTCAAGGCTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPSDWPG*TQGCAE
Trigger: CTCGGCACAGCCTTGAGTGCATCCAGGCCAATCAGA...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTCATGCTCCCCTGGTCTaGACAGGTCTCCATGTTGCT +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGHAPLV*TGLHVA
Trigger: AGCAACATGGAGACCTGTGCAGACCAGGGGAGCATG...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGCAGGGCAGGTACACTaGACTCCACAGCATCAGGTT +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVAGQVH*TPQHQV
Trigger: AACCTGATGCTGTGGAGTGCAGTGTACCTGCCCTGC...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTCTAGTGAGCGCCGGTaGTCCTGCCACTTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPSSERR*SCHFSF
Trigger: GAACGAGAAGTGGCAGGAGCACCGGCGCTCACTAGA...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTCTCAGCTACTCCGGCTaGAACAGAAAGCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPLSYSG*NRKLGT
Trigger: GGTGCCGAGCTTTCTGTTGCAGCCGGAGTAGCTGAG...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCTCAGCTACTCCGGCTaGAACAGAAAGCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSALSYSG*NRKLGT
Trigger: GGTGCCGAGCTTTCTGTTGCAGCCGGAGTAGCTGAG...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCAAGATGTTCTCCATCTaGCCCTCAGCTACTCCGGCT +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAKMFSI*PSATPA
Trigger: AGCCGGAGTAGCTGAGGGGCAGATGGAGAACATCTT...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTCTGTATCTCAATGCCTaGCCTGTGGGCAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVLYLNA*PVGRFL
Trigger: GAGGAACCTGCCCACAGGGCAGGCATTGAGATACAG...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGTCTCTGGGGCACCATTaGACACAAGCCCCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGSLGHH*TQAPLY
Trigger: GTAAAGAGGGGCTTGTGTGCAATGGTGCCCCAGAGA...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTCTAAGACCTGGGGGCTaGTCTGAGGCCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGLRPGG*SEALFS
Trigger: TGAAAACAGGGCCTCAGAGCAGCCCCCAGGTCTTAG...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTCATCGTCCAGGTGGCTaGGGGAAGGCTGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASHRPGG*GKAGRG
Trigger: GCCCCGACCAGCCTTCCCGCAGCCACCTGGACGATG...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTGTGTACACTGACATaGCATCATCGTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVLCTLT*HHRPGG
Trigger: GCCACCTGGACGATGATGGCATGTCAGTGTACACAG...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCTGCAGTGGTGCTTCCTaGTGGCAAGCCAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSACSGAS*WQARRH
Trigger: GTGCCTTCTGGCTTGCCAGCAGGAAGCACCACTGCA...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCCAGCAGCTTGGCCACTaGCCACCCAGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: SALGEYASSLPSSKGFPTQQLGH*PPRSLS
Trigger: GCTCAGTGACCTGGGTGGGCAGTGGCCAAGCTGCTG...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGCCTTGGTCAGGGAACTaGTACCAAGGGGAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLPWSGN*YQGEEE
Trigger: TTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGG...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTGCCTTGGATCCTCACTaGACCTGCTTCACCAGCATC +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGALDPH*TCFTSI
Trigger: GATGCTGGTGAAGCAGGTGCAGTGAGGATCCAAGGC...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTTCAGTGCAGTTGTGTaGTGGGGACAGCAGGACTCG +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEFSAVV*WGQQDS
Trigger: CGAGTCCTGCTGTCCCCAGCACACAACTGCACTGAA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ACGTGCTCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCCGCAGCCTCCTCCTTTaGCTCGGTTTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: TCSDALGFAWTESTREAFRSLLL*LGLPQQ
Trigger: CTGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCG...GAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGGTTTGGGTAATACTCTaGGCATTCGCAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRVWVIL*AFAASS
Trigger: GGAGGAGGCTGCGAATGCCCAGAGTATTACCCAAAC...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTTGTCGTCCACAGGGGTaGTTGGGGATGGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASCRPQG*LGMGRA
Trigger: TGCCCTGCCCATCCCCAACCACCCCTGTGGACGACA...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTTGTCGTCCACAGGGGTaGTTGGGGATGGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPACRPQG*LGMGRA
Trigger: TGCCCTGCCCATCCCCAACCACCCCTGTGGACGACA...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACGCCTGGGGCTGGGTATaGTGCACAGCTGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNAWGWV*CTAVVH
Trigger: GTGGACGACAGCTGTGCACCATACCCAGCCCCAGGC...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCGCCTGGGGCTGGGTATaGTGCACAGCTGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: SALGEYASSLPSSKGFPTAWGWV*CTAVVH
Trigger: GTGGACGACAGCTGTGCACCATACCCAGCCCCAGGC...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTACTTCTCGTTCAGGCTaGGGTCGCTGCAGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVTSRSG*GRCSAG
Trigger: GCCGGCGCTGCAGCGACCCCAGCCTGAACGAGAAGT...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCTCAATGCCTGCCCTGTaGGCAGGTTCCTCTACTCCA +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPSMPAL*AGSSTP
Trigger: TGGAGTAGAGGAACCTGCCCACAGGGCAGGCATTGA...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTCAATGCCTGCCCTGTaGGCAGGTTCCTCTACTCCA +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGSMPAL*AGSSTP
Trigger: TGGAGTAGAGGAACCTGCCCACAGGGCAGGCATTGA...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCCTTGGTGAAGTCCAATaGCTGAGGCCTCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWALGEVQ*LRPQVS
Trigger: AGACACCTGAGGCCTCAGCCATTGGACTTCACCAAG...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCACGTTTGGTCCTCTaGTCTCAAAAGGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGPRLVL*SQKGLG
Trigger: CCCAAGTCCCTTTTGAGACCAGAGGACCAAACGTGG...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACAAGGGCTGGGTTCCATaGTCTGAGGAAGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNKGWVP*SEEACP
Trigger: AGGACAGGCTTCCTCAGACCATGGAACCCAGCCCTT...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCACCACAGACCCCACTTaGGGCCTCTCGACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSTTDPT*GLSTRL
Trigger: AAGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGT...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGAATGCCCATTGGGTGTaGGGTACATCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWNAHWV*GTSGGC
Trigger: GCACCCTCCAGATGTACCCCACACCCAATGGGCATT...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAATGCCCATTGGGTGTaGGGTACATCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPNAHWV*GTSGGC
Trigger: GCACCCTCCAGATGTACCCCACACCCAATGGGCATT...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGTACCAGCCTCCCCATTaGCGCAATGCCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRYQPPH*RNAHWV
Trigger: CACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTA...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCGATGGCCTTCCTGAGTaGCTATGCAGCCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTDGLPE*LCSHLW
Trigger: CCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATC...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCCCATCATCGTCCAGGTaGCTGCGGGAAGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: SALGEYASSLPSSKGFPTPSSSR*LREGWS
Trigger: CGACCAGCCTTCCCGCAGCCACCTGGACGATGATGG...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAAAGCACCATCATCGTCCAGGTaGCTGCGGGAAGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: SVLMPEGGKCYTAWPRKAPSSSR*LREGWS
Trigger: CGACCAGCCTTCCCGCAGCCACCTGGACGATGATGG...TGCTTTCCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCGAGCTGGTCAGGTACTaGCTCTCCAGGCGACTCTTC +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCELVRY*LSRRLF
Trigger: GAAGAGTCGCCTGGAGAGCCAGTACCTGACCAGCTC...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTATAGGAACAGCAGCTTaGCCACTGCCCACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGIGTAA*PLPTQV
Trigger: GACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTAT...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGGTCACTCTGTACAGGTaGTTCCACGCTCCCATTCCA +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRVTLYR*FHAPIP
Trigger: TGGAATGGGAGCGTGGAACCACCTGTACAGAGTGAC...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACTACGAAGTCACCAAGTaGCCCTTCACTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNYEVTK*PFTAGQ
Trigger: CTGGCCAGCAGTGAAGGGCCACTTGGTGACTTCGTA...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCGCTCTGGGCTTTGCCTaGACTGAGAGCACCAGGGAA +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSAALGFA*TESTRE
Trigger: TTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGC...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAGGTTCCTCTCTGTGTaGAGAGAGGGCGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRRFLSV*REGGKE
Trigger: CTCCTTCCCGCCCTCTCTCCACACAGAGAGGAACCT...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGAGCTTTGAATGGGCCTaGAGGCTCCCTCTCCACGAG +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWSFEWA*RLPLHE
Trigger: CTCGTGGAGAGGGAGCCTCCAGGCCCATTCAAAGCT...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 72 bp CATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTaGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: HSKVHGPLGLPR*SGPVIGTAAWP
Trigger: TGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGCGCTGGGCAGCGCCTaGGCCGCTGGGACGTCTCGT +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSALGSA*AAGTSR
Trigger: ACGAGACGTCCCAGCGGCTCAGGCGCTGCCCAGCGC...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGAATTGGAAAGGGCAATaGTGGCATCCTCGGCACGGC +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLNWKGQ*WHPRHG
Trigger: GCCGTGCCGAGGATGCCATCATTGCCCTTTCCAATT...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCTCCAGGCAGGCACTATaGGCTCTTGAGGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPSRQAL*ALEDSY
Trigger: GTAGCTATCCTCAAGAGCTCATAGTGCCTGCCTGGA...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGAGTCCACAGCGGGCAATaGCAGCTCCATTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SRSQISILLALTTILPPGVHSGQ*QLHCSG
Trigger: ACCAGAGCAATGGAGCTGTCATTGCCCGCTGTGGAC...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCCCCGGATCTGGCATCTaGGTGCACAGCAACCGCAGA +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLPGSGI*VHSNRR
Trigger: TCTGCGGTTGCTGTGCACTCAGATGCCAGATCCGGG...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCTCCGAGTTCTCCCCATaGCCACACCGGTCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSASEFSP*PHRSAN
Trigger: ATTTGCTGACCGGTGTGGTCATGGGGAGAACTCGGA...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCTCCGAGTTCTCCCCATaGCCACACCGGTCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCSEFSP*PHRSAN
Trigger: ATTTGCTGACCGGTGTGGTCATGGGGAGAACTCGGA...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTAGTTCTGGGTCTTGGTaGAGTCCAATGGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSSSGSW*SPMAEA
Trigger: GGCCTCAGCCATTGGACTTCACCAAGACCCAGAACT...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCTTCAGAAATGCCCTGTaGGAACAGAGGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAFRNAL*EQRPAH
Trigger: ATGAGCTGGCCTCTGTTCTCACAGGGCATTTCTGAA...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGGAACGTGTCAGGCTaGGAGTGCTGCCAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLGNVSG*ECCQGK
Trigger: CTTCCCTTGGCAGCACTCTCAGCCTGACACGTTCCC...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTCGTGTCTGTGTACACTaGCATGCCATCATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGRVCVH*HAIIVQ
Trigger: CTGGACGATGATGGCATGTCAGTGTACACAGACACG...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTTTCCTGCTGGTGGCCTaGCTCAATCTGACGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASFLLVA*LNLTQA
Trigger: CGCCTGCGTCAGATTGAGTCAGGCCACCAGCAGGAA...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCCCACAATTCCACGTTTaGTCAACACGGTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAPQFHV*STRSVS
Trigger: GGACACTGACCGTGTTGATCAAACGTGGAATTGTGG...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACGCCCACCCAGGTCACTaGGCTTCAGTTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNAHPGH*ASVGSG
Trigger: GCCACTTCCAACTGAAGCTCAGTGACCTGGGTGGGC...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAGGGCTTTGCCTGGACTaGGAGCACCAGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGGLCLD*EHQGSL
Trigger: AAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCC...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCGCAGGAGAACCACAGTaGCAACCCAAATCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSAGEPQ*QPKSRG
Trigger: GCCCCTGGATTTGGGTTGTCACTGTGGTTCTCCTGC...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTCTGATTGGCCTGGATaGACTCAAGGCTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPSDWPG*TQGCAE
Trigger: CTCGGCACAGCCTTGAGTGCATCCAGGCCAATCAGA...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCAGCAGGTGGTCGGATTaGGTTGTTCAGTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWASRWSD*VVQSLQ
Trigger: CTGAAGAGACTGAACAACGCAATCCGACCACCTGCT...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCATGCTCCCCTGGTCTaGACAGGTCTCCATGTTGCT +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSAHAPLV*TGLHVA
Trigger: AGCAACATGGAGACCTGTGCAGACCAGGGGAGCATG...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGAACCTTGAAGTTACATaGTCCCCTGGTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVNLEVT*SPGLHR
Trigger: CCTGTGCAGACCAGGGGAGCATGTAACTTCAAGGTT...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCAACCTTGAAGTTACATaGTCCCCTGGTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWANLEVT*SPGLHR
Trigger: CCTGTGCAGACCAGGGGAGCATGTAACTTCAAGGTT...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCTCCTTTGGCTCGGTTTaGCACAGCAGCTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPSFGSV*HSSCIG
Trigger: TCCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGA...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGATCTGGCATCTGAGTaGACAGCAACCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVDLASE*TATAET
Trigger: AGTCTCTGCGGTTGCTGTGCACTCAGATGCCAGATC...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCGCAGGGCAGGTACACTaGACTCCACAGCATCAGGTT +
Preference number: 4 (lower is better)
Translates to: SDALGFAWTESTREAFWAAGQVH*TPQHQV
Trigger: AACCTGATGCTGTGGAGTGCAGTGTACCTGCCCTGC...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCGCAGGGCAGGTACACTaGACTCCACAGCATCAGGTT +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCAGQVH*TPQHQV
Trigger: AACCTGATGCTGTGGAGTGCAGTGTACCTGCCCTGC...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGATCTAGTGAGCGCCGGTaGTCCTGCCACTTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SRSQISILLALTTILPPGSSERR*SCHFSF
Trigger: GAACGAGAAGTGGCAGGAGCACCGGCGCTCACTAGA...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGAAGATGTTCTCCATCTaGCCCTCAGCTACTCCGGCT +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEKMFSI*PSATPA
Trigger: AGCCGGAGTAGCTGAGGGGCAGATGGAGAACATCTT...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGTCTTTGGTGGCCTCCTaGAAGATGTTCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLSLVAS*KMFSIC
Trigger: GCAGATGGAGAACATCTTGCAGGAGGCCACCAAAGA...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTCTGTATCTCAATGCCTaGCCTGTGGGCAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGLYLNA*PVGRFL
Trigger: GAGGAACCTGCCCACAGGGCAGGCATTGAGATACAG...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTCTGTATCTCAATGCCTaGCCTGTGGGCAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPLYLNA*PVGRFL
Trigger: GAGGAACCTGCCCACAGGGCAGGCATTGAGATACAG...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCAAGGGAAGTCCTATaGACCACAGACCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLPREVL*TTDPTW
Trigger: CCAAGTGGGGTCTGTGGTGCATAGGACTTCCCTTGG...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCTAAGACCTGGGGGCTaGTCTGAGGCCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSALRPGG*SEALFS
Trigger: TGAAAACAGGGCCTCAGAGCAGCCCCCAGGTCTTAG...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCCTTCCTGAGTGGCTATaGAGCCACTTGTGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTLPEWL*SHLWCK
Trigger: CTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAG...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TCCCTGTGCTGGCTGAGGAAGAGATTGTTTAGGGGACCAGGCCCCAGAATGGGGTGCAGTGGTGCTTCCTaGTGGCAAGCCAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SLCWLRKRLFRGPGPRMGCSGAS*WQARRH
Trigger: GTGCCTTCTGGCTTGCCAGCAGGAAGCACCACTGCA...CCCCATTCTGGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCAGCACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGACTGGCTTTCTTCCCTaGTCACGGTCTCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVETGFLP*SRSQIS
Trigger: GGAGATCTGAGACCGTGAGCAGGGAAGAAAGCCAGT...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAGGCGCCTAAGGGGATaGCATTTACCGTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRRRLRG*HLPCAS
Trigger: AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCT...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGAGAGACGTGCTCAGATaGTCTGGGCTTTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLRDVLR*SGLCLD
Trigger: GTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCT...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCAGAGACGTGCTCAGATaGTCTGGGCTTTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SDALGFAWTESTREAFWARDVLR*SGLCLD
Trigger: GTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCT...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCCATGGTGAGGCTCCTTaGCAAGGTCTAGAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPHGEAP*QGLESE
Trigger: TTCCGACTCTAGACCTTGGCAAGGAGCCTCACCATG...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGTTGCCCACAGAGAACTaGCTTTCTCCATATGCAGCC +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVLPTEN*LSPYAA
Trigger: GGCTGCATATGGAGAAAGGCAGTTCTCTGTGGGCAA...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGGAAGCAAGCTGGCCTTaGCCACAGAGAACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEEASWP*PQRTAF
Trigger: AAAGGCAGTTCTCTGTGGGCAAGGCCAGCTTGCTTC...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTGGAACAAGGCTTCAGTaGAGTTGTGTGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGGTRLQ*SCVLGT
Trigger: TGTCCCCAGCACACAACTGCACTGAAGCCTTGTTCC...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGCGTTCCCACAATTCCTaGAGTGGTGCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRRSHNS*SGASCW
Trigger: CCAGCAGGAAGCACCACTGCAGGAATTGTGGGAACG...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGTTACATGCTCCCCTaGTCTGCACAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPSYMLP*SAQVSM
Trigger: CATGGAGACCTGTGCAGACCAGGGGAGCATGTAACT...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCCCACCAGCTAACCTCTaGCTGTCCACAGCGGGCAAT +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSPPANL*LSTAGN
Trigger: ATTGCCCGCTGTGGACAGCCAGAGGTTAGCTGGTGG...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTCCACCAGCTAACCTCTaGCTGTCCACAGCGGGCAAT +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATPPANL*LSTAGN
Trigger: ATTGCCCGCTGTGGACAGCCAGAGGTTAGCTGGTGG...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCGCTTCTGCGGTTGGATaGCTAAACTCTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPASAVG*LNSLLL
Trigger: CAGGAGCAGAGAGTTTAGCCATCCAACCGCAGAAGC...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCGCTTCTGCGGTTGGATaGCTAAACTCTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPASAVG*LNSLLL
Trigger: CAGGAGCAGAGAGTTTAGCCATCCAACCGCAGAAGC...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTGCCAATGCCACAATCTaGGGGGTGCGGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVANATI*GVRSQP
Trigger: TGGCTGGGACCGCACCCCCCAGATTGTGGCATTGGC...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGGCCAATGCCACAATCTaGGGGGTGCGGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMANATI*GVRSQP
Trigger: TGGCTGGGACCGCACCCCCCAGATTGTGGCATTGGC...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCATTTCCACGAGGACCTaGAAACCCTCTATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAISTRT*KPSMVR
Trigger: CCGAACCATAGAGGGTTTCCAGGTCCTCGTGGAAAT...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGATCAGGTTACGCACATaGCACACAGGGTACAGCACG +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEIRLRT*HTGYST
Trigger: CGTGCTGTACCCTGTGTGCCATGTGCGTAACCTGAT...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTATCAGGGCTGGTGCCTaGGGCTGGGTATGGTGCACA +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASIRAGA*GWVWCT
Trigger: TGTGCACCATACCCAGCCCCAGGCACCAGCCCTGAT...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCACTCTCCTCTTTGGTaGCCTCCTGCAAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGHSPLW*PPARCS
Trigger: AGAACATCTTGCAGGAGGCCACCAAAGAGGAGAGTG...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTAAGGGCTGGGTTCCATaGTCTGAGGAAGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGKGWVP*SEEACP
Trigger: AGGACAGGCTTCCTCAGACCATGGAACCCAGCCCTT...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGAAGGGCTGGGTTCCATaGTCTGAGGAAGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLKGWVP*SEEACP
Trigger: AGGACAGGCTTCCTCAGACCATGGAACCCAGCCCTT...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCACCACAGACCCCACTTaGGGCCTCTCGACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLTTDPT*GLSTRL
Trigger: AAGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGT...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCTGGCGCAATGCCCATTaGGTGTGGGGTACATCTGGA +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSAWRNAH*VWGTSG
Trigger: TCCAGATGTACCCCACACCCAATGGGCATTGCGCCA...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCAGTGGTGCTTCCTGCTaGCAAGCCAGAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCSGASC*QARRHC
Trigger: ACAGTGCCTTCTGGCTTGCCAGCAGGAAGCACCACT...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCCTGCTGGCTGGGAACTaGAACCTTCTGGTTACAACA +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWALLAGN*NLLVTT
Trigger: TGTTGTAACCAGAAGGTTCCAGTTCCCAGCCAGCAG...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGACTTGCATACTCGACTaGGTTCAAAGAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGTCILD*VQRAAG
Trigger: GCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGT...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCTCTGCCCAGGTTGAGTaGGCCTGTCATAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: SDALGFAWTESTREAFWASAQVE*ACHRNS
Trigger: GCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGA...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGGTCACTCTGTACAGGTaGTTCCACGCTCCCATTCCA +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEVTLYR*FHAPIP
Trigger: TGGAATGGGAGCGTGGAACCACCTGTACAGAGTGAC...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACGTCACTCTGTACAGGTaGTTCCACGCTCCCATTCCA +
Preference number: 4 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNVTLYR*FHAPIP
Trigger: TGGAATGGGAGCGTGGAACCACCTGTACAGAGTGAC...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTGCTCGGCAGTTACAGTaGGCCTGGCAACCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASARQLQ*AWQPLV
Trigger: GACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGC...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGGCTCTGATGTGGCGGTaGCGTGAGGAATGGTTGCAT +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLALMWR*REEWLH
Trigger: ATGCAACCATTCCTCACGCCACCGCCACATCAGAGC...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCCCTGTGCTGGCTGAGGAAGAGATTGTTTAGGGGACCAGGCCCCAGAATGGGGCAACCAGCTCTGATGTaGCGGTGGCGTGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: SLCWLRKRLFRGPGPRMGQPALM*RWREEW
Trigger: CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTG...CCCCATTCTGGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCAGCACAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGGGGAAGATCCATGATTaGTTTGGTTTGGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRGKIHD*FGLGTG
Trigger: CCCCGTTCCCAAACCAAACCAATCATGGATCTTCCC...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTGACACACCTTGCCCTTaGTCAGGGAACTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGDTPCP*SGNCYQ
Trigger: TTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCGACACACCTTGCCCTTaGTCAGGGAACTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTDTPCP*SGNCYQ
Trigger: TTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCGCTCTGGGCTTTGCCTaGACTGAGAGCACCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSALGFA*TESTRE
Trigger: TTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGC...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCCTGGGCTGGCGCCTCTaGAGCAAGGCACCCCTCAAT +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCLGWRL*SKAPLN
Trigger: ATTGAGGGGTGCCTTGCTCCAGAGGCGCCAGCCCAG...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGCCACCTGCTCCCAGCTaGCTTCAGAGAAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWPPAPS*LQRKSL
Trigger: CAGAGATTTTCTCTGAAGCCAGCTGGGAGCAGGTGG...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS-3UTR CCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTCCACCTGCTCCCAGCTaGCTTCAGAGAAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVPPAPS*LQRKSL
Trigger: CAGAGATTTTCTCTGAAGCCAGCTGGGAGCAGGTGG...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS-3UTR TCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATGCGCTGGGCAGCGCCTaGGCCGCTGGGACGTCTCGT +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDALGSA*AAGTSR
Trigger: ACGAGACGTCCCAGCGGCTCAGGCGCTGCCCAGCGC...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCGAGTCTCTTCATCCATaGCAAGAGGCCCAGATTAGG +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPESLHP*QEAQIR
Trigger: CCTAATCTGGGCCTCTTGTCATGGATGAAGAGACTC...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTTCCTGGGAAAGATCTaGTTGGCCTGGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWFLGKI*LAWMHS
Trigger: TGAGTGCATCCAGGCCAATCAGATCTTTCCCAGGAA...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTTCAAGGAAAGGAACCTaGAGATTCTCATCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVSRKGT*RFSSSR
Trigger: CCGGGAGGATGAGAATCTTCAGGTTCCTTTCCTTGA...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTCTGTGCTCTCTCCATaGAGTTCAAGGAAAGGAACC +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRSVLSP*SSRKGT
Trigger: GGTTCCTTTCCTTGAACTTCATGGAGAGAGCACAGA...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGCACTACCAGAAGCGCTaGTTTCAGAAGCACAGACAA +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLHYQKR*FQKHRQ
Trigger: TTGTCTGTGCTTCTGAAATCAGCGCTTCTGGTAGTG...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCACTACCAGAAGCGCTaGTTTCAGAAGCACAGACAA +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGHYQKR*FQKHRQ
Trigger: TTGTCTGTGCTTCTGAAATCAGCGCTTCTGGTAGTG...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCTTCAGAAATGCCCTGTaGGAACAGAGGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTFRNAL*EQRPAH
Trigger: ATGAGCTGGCCTCTGTTCTCACAGGGCATTTCTGAA...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTGGGAACGTGTCAGGCTaGGAGTGCTGCCAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVGNVSG*ECCQGK
Trigger: CTTCCCTTGGCAGCACTCTCAGCCTGACACGTTCCC...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGCAGCTGACGGCTCAGTaGGTCCTTGCTCCTACCAGC +
Preference number: 4 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKQLTAQ*VLAPTS
Trigger: GCTGGTAGGAGCAAGGACTCACTGAGCCGTCAGCTG...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGGGGAATATGCTCTCATAGCAGACAGCTaGCGGCTCAGTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSSQEGDDAQGSALGEYALIADS*RLSESL
Trigger: CAAGGACTCACTGAGCCGTCAGCTGTCTGCTATGAG...AGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTTCCCTCAGTGTCACGTaGCAGCAGGCAGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASSLSVT*QQAARQ
Trigger: CTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGGA...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCTCATTTATCCATCTGTaGGGGGACTGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SDALGFAWTESTREAFWASFIHL*GDWLSS
Trigger: GGAGCTGAGCCAGTCCCCTCACAGATGGATAAATGA...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTCATTTATCCATCTGTaGGGGGACTGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWSFIHL*GDWLSS
Trigger: GGAGCTGAGCCAGTCCCCTCACAGATGGATAAATGA...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGGACTGCCCCAAAGAGTaGAGGCCTCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMDCPKE*RPLGSS
Trigger: AGAGCTCCCCAGAGGCCTTCACTCTTTGGGGCAGTC...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGCAGGTGGTCGGATTaGGTTGTTCAGTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPSRWSD*VVQSLQ
Trigger: CTGAAGAGACTGAACAACGCAATCCGACCACCTGCT...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGGTTTGCCACAGCAGCTaGATAGGAGCGTGCATCCAA +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLVCHSS*IGACIQ
Trigger: TTGGATGCACGCTCCTATGCAGCTGCTGTGGCAAAC...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGTCCTTTGGCTCGGTTTaGCACAGCAGCTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLSFGSV*HSSCIG
Trigger: TCCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGA...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTACACAGTCAAGCCACTaGAGAAACACTGGGCAACGT +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGTQSSH*RNTGQR
Trigger: ACGTTGCCCAGTGTTTCTGCAGTGGCTTGACTGTGT...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGACTCAGCTACTCCGGCTaGAACAGAAAGCTCGGCACC +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGLSYSG*NRKLGT
Trigger: GGTGCCGAGCTTTCTGTTGCAGCCGGAGTAGCTGAG...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCTCTTTGGTGGCCTCCTaGAAGATGTTCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPSLVAS*KMFSIC
Trigger: GCAGATGGAGAACATCTTGCAGGAGGCCACCAAAGA...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCTCTTTGGTGGCCTCCTaGAAGATGTTCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPSLVAS*KMFSIC
Trigger: GCAGATGGAGAACATCTTGCAGGAGGCCACCAAAGA...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCCAGGTGTCTTCCTCCTaGTCTCCTTTTCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAQVSSS*SPFLRE
Trigger: CTCTCTTAGAAAAGGAGAGCAGGAGGAAGACACCTG...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCTCTGCTGTTCAGAAATaGCCTGTGAGAACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPSAVQK*PVRTEA
Trigger: GGCCTCTGTTCTCACAGGGCATTTCTGAACAGCAGA...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGACACTGAGCCCACTCTaGTGTTCAGAAATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVETLSPL*CSEMPC
Trigger: ACAGGGCATTTCTGAACAGCAGAGTGGGCTCAGTGT...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACACACTGAGCCCACTCTaGTGTTCAGAAATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNTLSPL*CSEMPC
Trigger: ACAGGGCATTTCTGAACAGCAGAGTGGGCTCAGTGT...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCACACTGAGCCCACTCTaGTGTTCAGAAATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPTLSPL*CSEMPC
Trigger: ACAGGGCATTTCTGAACAGCAGAGTGGGCTCAGTGT...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCTTCTATTCGAAACTaGTCCACAGGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVESSIRN*STGTSR
Trigger: CCTGGAGGTCCCTGTGGAGCAGTTTCGAATAGAAGA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTTCTCTGGGGCACCATTaGACACAAGCCCCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSSLGHH*TQAPLY
Trigger: GTAAAGAGGGGCTTGTGTGCAATGGTGCCCCAGAGA...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTGGCTCAGTGAGTCCTTaGTCCTACCAGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASGSVSP*SYQPPH
Trigger: ATGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCC...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCAGTTCAAGGTCAATaGTGGAGCTTGTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGPVQGQ*WSLWDV
Trigger: TACATCCCACAAGCTCCAGCATTGACCTTGAACTGG...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGGCTCCCATTCCAAAGTaGACGGGCCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMAPIPK*TGLSVC
Trigger: GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGC...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCACTGGCTTTCTTCCCTaGTCACGGTCTCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCTGFLP*SRSQIS
Trigger: GGAGATCTGAGACCGTGAGCAGGGAAGAAAGCCAGT...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTAGGCGCCTAAGGGGATaGCATTTACCGTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATRRLRG*HLPCAS
Trigger: AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCT...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTACCAGTCTGTACTCATaGCTGAGGGTGGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGTSLYS*LRVGSA
Trigger: AGCACTTCCCACCCTCAGGCATGAGTACAGACTGGT...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTCTCACTGAGGAAAGGTaGCCTGAATCTCCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGLTEER*PESPQG
Trigger: GCCTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAG...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCGCCCTTCCTAGGCCATaGCAGTGTTTTAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAALPRP*QCFNLL
Trigger: CAGCAAATTAAAACACTGGCATGGCCTAGGAAGGGC...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGGAAGCAAGCTGGCCTTaGCCACAGAGAACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLEASWP*PQRTAF
Trigger: AAAGGCAGTTCTCTGTGGGCAAGGCCAGCTTGCTTC...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACTCAGGTGGATACAGCTaGAGCCCTGGGGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNSGGYS*SPGDRS
Trigger: TGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGA...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTCAGGTGGATACAGCTaGAGCCCTGGGGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLSGGYS*SPGDRS
Trigger: TGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGA...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCTCCTGTTTATCCACCTaGTCCCAGCTGGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SDALGFAWTESTREAFWASCLST*SQLASE
Trigger: CTCTGAAGCCAGCTGGGAGCAGGTGGATAAACAGGA...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS-3UTR CCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGAAAGATCTGATTaGCCTGGATGCACTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEWERSD*PGCTQG
Trigger: GCCTTGAGTGCATCCAGGCCAATCAGATCTTTCCCA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTAGTTACATGCTCCCCTaGTCTGCACAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGSYMLP*SAQVSM
Trigger: CATGGAGACCTGTGCAGACCAGGGGAGCATGTAACT...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTGCTTCTGCGGTTGGATaGCTAAACTCTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPASAVG*LNSLLL
Trigger: CAGGAGCAGAGAGTTTAGCCATCCAACCGCAGAAGC...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGCGCAGCCTCCTCCTTTaGCTCGGTTTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKRSLLL*LGLPQQ
Trigger: CTGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCG...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGGTTTGGGTAATACTCTaGGCATTCGCAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLVWVIL*AFAASS
Trigger: GGAGGAGGCTGCGAATGCCCAGAGTATTACCCAAAC...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCCCAATTTCCCGGATCTaGCATCTGAGTGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPPISRI*HLSAQQ
Trigger: TTGCTGTGCACTCAGATGCCAGATCCGGGAAATTGG...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCATTTCCACGAGGACCTaGAAACCCTCTATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPISTRT*KPSMVR
Trigger: CCGAACCATAGAGGGTTTCCAGGTCCTCGTGGAAAT...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCACTGCAGAAACACTaGGCAACGTTCATTCAGATC +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGPLQKH*ATFIQI
Trigger: GATCTGAATGAACGTTGCCCAGTGTTTCTGCAGTGG...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTTTCCCCTCTCTCCTTaGCGTTGTTGCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEFPLSP*RCCTGM
Trigger: CATTCCTGTGCAACAACGCCAAGGAGAGAGGGGAAA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCATCAGGTTACGCACATaGCACACAGGGTACAGCACG +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCIRLRT*HTGYST
Trigger: CGTGCTGTACCCTGTGTGCCATGTGCGTAACCTGAT...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTATCAGGTTACGCACATaGCACACAGGGTACAGCACG +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGIRLRT*HTGYST
Trigger: CGTGCTGTACCCTGTGTGCCATGTGCGTAACCTGAT...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCCCCCGGCACTCTGGTaGGCTTCCCTAGGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIPPALW*ASLGCR
Trigger: CCGACAGCCTAGGGAAGCCCACCAGAGTGCCGGGGG...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTCACTCTCCTCTTTGGTaGCCTCCTGCAAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGHSPLW*PPARCS
Trigger: AGAACATCTTGCAGGAGGCCACCAAAGAGGAGAGTG...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCTCCACTCTCCTCTTTaGTGGCCTCCTGCAAGATGT +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSLHSPL*WPPARC
Trigger: ACATCTTGCAGGAGGCCACCAAAGAGGAGAGTGGAG...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGCTTGGTGAAGTCCAATaGCTGAGGCCTCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWLGEVQ*LRPQVS
Trigger: AGACACCTGAGGCCTCAGCCATTGGACTTCACCAAG...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCACGTTTGGTCCTCTaGTCTCAAAAGGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCPRLVL*SQKGLG
Trigger: CCCAAGTCCCTTTTGAGACCAGAGGACCAAACGTGG...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTTGTCTCTGAAGGGCTaGGTTCCATGGTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVELSLKG*VPWSEE
Trigger: TTCCTCAGACCATGGAACCCAGCCCTTCAGAGACAA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGACCACAGACCCCACTTaGGGCCTCTCGACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DTPCPWSGNCYQGEEEYRTTDPT*GLSTRL
Trigger: AAGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGT...CCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCCCTGTTTTCAGTCTCTaGGGCACCATTGCACACAAG +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPPVFSL*GTIAHK
Trigger: CTTGTGTGCAATGGTGCCCCAGAGACTGAAAACAGG...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTGGTGTGGGGTACATCTaGAGGGTGCTAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPAGVGYI*RVLRPG
Trigger: CCCAGGTCTTAGCACCCTCCAGATGTACCCCACACC...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCTACCAGCCTCCCCATTaGCGCAATGCCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: SALGEYASSLPSSKGFPTYQPPH*RNAHWV
Trigger: CACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTA...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCTTCCTTGAGTGTAAGTaGGCAGAGCTGCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAFLECK*AELQLI
Trigger: TATGAGCTGCAGCTCTGCCCACTTACACTCAAGGAA...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTCCTTGAGTGTAAGTaGGCAGAGCTGCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRFLECK*AELQLI
Trigger: TATGAGCTGCAGCTCTGCCCACTTACACTCAAGGAA...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGCAAAGAGCTGCTGGCTaGGAACTGGAACCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWQRAAG*ELEPSG
Trigger: ACCAGAAGGTTCCAGTTCCCAGCCAGCAGCTCTTTG...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACACTTGCATACTCGACTaGGTTCAAAGAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNTCILD*VQRAAG
Trigger: GCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGT...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCACTTGCATACTCGACTaGGTTCAAAGAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTTCILD*VQRAAG
Trigger: GCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGT...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTACTTGCATACTCGACTaGGTTCAAAGAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVTCILD*VQRAAG
Trigger: GCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGT...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCCAATGCTGGAGCTTGTaGGATGTAGGCTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTQCWSL*DVGCYS
Trigger: GCTATAGCAGCCTACATCCCACAAGCTCCAGCATTG...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGTTCAAGGTCAATGCTaGAGCTTGTGGGATGTAGGC +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVVQGQC*SLWDVG
Trigger: GCCTACATCCCACAAGCTCCAGCATTGACCTTGAAC...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACTCACTGAGCTTCAGTTaGAAGTGGCAGCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNSLSFS*KWQQWA
Trigger: AGCCCATTGCTGCCACTTCCAACTGAAGCTCAGTGA...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAAAGCAATAGGAACAGCAGCTTaGCCACTGCCCACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SVLMPEGGKCYTAWPRKAIGTAA*PLPTQV
Trigger: GACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTAT...TGCTTTCCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTGTCACTCTGTACAGGTaGTTCCACGCTCCCATTCCA +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPVTLYR*FHAPIP
Trigger: TGGAATGGGAGCGTGGAACCACCTGTACAGAGTGAC...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCGCTCGGCAGTTACAGTaGGCCTGGCAACCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCARQLQ*AWQPLV
Trigger: GACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGC...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAAAGCACAACCAGCTCTGATGTaGCGGTGGCGTGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: SVLMPEGGKCYTAWPRKAQPALM*RWREEW
Trigger: CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTG...TGCTTTCCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACCAAGTGGCCCTTCACTGGACCAGGCCCCAGAATaGGGACCCAGGTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GHVTSLRNPTKSPSGPSLDQAPE*GPRCVW
Trigger: CCAGACACACCTGGGTCCCCATTCTGGGGCCTGGTC...CAGTGAAGGGCCACTTGGTGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCGGAACGGGGGATTTCTaGAACCCTGAGTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTGTGDF*NPESGF
Trigger: AAATCCAGACTCAGGGTTCCAGAAATCCCCCGTTCC...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCCTCTCTGTGTGGAGAGAGGGCGGGAAGGAGACCTCTAGTTGACTGCATAACCGTGGCCCTTCACTGCTaGCCAGCAGCCAGACAAGTG +
Preference number: 4 (lower is better)
Translates to: SSLCGERAGRRPLVDCITVALHC*PAARQV
Trigger: CACTTGTCTGGCTGCTGGCCAGCAGTGAAGGGCCAC...GGTTATGCAGTCAACTAGAGGTCTCCTTCCCGCCCTCTCTCCACACAGAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTGAACTGCAGCAGAGTCAAGCATaGCCTCCCCAAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLQSGGYSCSPGDRSLELQQSQA*PPQEGG
Trigger: CCCTCCCTCTTGGGGAGGCCATGCTTGACTCTGCTG...CAGTTCAAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTACTCACCACAGATGCTaGGCTGGCGCCTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVTHHRC*AGASGA
Trigger: TGCTCCAGAGGCGCCAGCCCAGCATCTGTGGTGAGT...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTGAACTGACTCACCACAGATGCTaGGCTGGCGCCTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LLQSGGYSCSPGDRSLELTHHRC*AGASGA
Trigger: TGCTCCAGAGGCGCCAGCCCAGCATCTGTGGTGAGT...CAGTTCAAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 72 bp ACTGGAAGTCAGAGACGTGCTCAGATGCTCTGGGCTTaGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TGSQRRAQMLWA*PGLRAPGKPSG
Trigger: CCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCTGACTTCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCTGTGCTCTCTCCATaGAGTTCAAGGAAAGGAACC +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVESVLSP*SSRKGT
Trigger: GGTTCCTTTCCTTGAACTTCATGGAGAGAGCACAGA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGCTCGTTTTTAAACCTTaGAGTTACATGCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLLVFKP*SYMLPW
Trigger: CCAGGGGAGCATGTAACTTCAAGGTTTAAAAACGAG...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGACAAGCTTTGGCTACTaGCTGTACCAGATGCTCATC +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWTSFGY*LYQMLI
Trigger: GATGAGCATCTGGTACAGTCAGTAGCCAAAGCTTGT...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGACAAGCTTTGGCTACTaGCTGTACCAGATGCTCATC +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVETSFGY*LYQMLI
Trigger: GATGAGCATCTGGTACAGTCAGTAGCCAAAGCTTGT...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTAGCAACCGCAGAGACTaGAAACTCCTCCGAATAGAA +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGSNRRD*KLLRIE
Trigger: TTCTATTCGGAGGAGTTTTCAGTCTCTGCGGTTGCT...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACCAAGTGGCCCTTCACTGCCCGGATCTGGCATCTaGGTGCACAGCAACCGCAGA +
Preference number: 4 (lower is better)
Translates to: GHVTSLRNPTKSPSGPSLPGSGI*VHSNRR
Trigger: TCTGCGGTTGCTGTGCACTCAGATGCCAGATCCGGG...CAGTGAAGGGCCACTTGGTGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGCACTACCAGAAGCGCTaGTTTCAGAAGCACAGACAA +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEHYQKR*FQKHRQ
Trigger: TTGTCTGTGCTTCTGAAATCAGCGCTTCTGGTAGTG...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCAGCACGGCTTCTGACTaGGAGGAATACAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPSTASD*EEYSRF
Trigger: AAACCTACTGTATTCCTCTCAGTCAGAAGCCGTGCT...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGTTCAGAAATGCCCTGTaGGAACAGAGGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRFRNAL*EQRPAH
Trigger: ATGAGCTGGCCTCTGTTCTCACAGGGCATTTCTGAA...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCTTGGGGCCCACTTACTaGCTTCACCTTATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCLGPTY*LHLIFH
Trigger: GTGGAAGATAAGGTGAAGTCAGTAAGTGGGCCCCAA...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGCTGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTTGAGGCGAGAGGTAGGGAACGTGTCAGGCTaGGAGTGCTGCCAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GCPEIRAAAKNGALRREVGNVSG*ECCQGK
Trigger: CTTCCCTTGGCAGCACTCTCAGCCTGACACGTTCCC...TACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACTGCAGATGGCCTTCCTaGGTGGCTATGCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNCRWPS*VAMQPL
Trigger: AAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCA...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGTGGCCTGACTCAATCTaGCGCAGGCGCTGTTGGATC +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMWPDSI*RRRCWI
Trigger: GATCCAACAGCGCCTGCGTCAGATTGAGTCAGGCCA...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCCCTCAGTGTCACGTaGCAGCAGGCAGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPSLSVT*QQAARQ
Trigger: CTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGGA...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCTCCCTCAGTGTCACGTaGCAGCAGGCAGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSSLSVT*QQAARQ
Trigger: CTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGGA...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACCACGGGGGACAACATaGCGGCTACCCACTCCCAGC +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSPRGTT*RLPTPS
Trigger: GCTGGGAGTGGGTAGCCGTCATGTTGTCCCCCGTGG...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCACCCACAGACCCATGTaGTGGGAGGGATGCCCAACA +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCTHRPM*WEGCPT
Trigger: TGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGT...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGGGCCCACAAACTCTGTaGTCTCTCCATGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEGPQTL*SLHEVQ
Trigger: TTGAACTTCATGGAGAGAGCACAGAGTTTGTGGGCC...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGAGCAGGTGGTCGGATTaGGTTGTTCAGTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWSRWSD*VVQSLQ
Trigger: CTGAAGAGACTGAACAACGCAATCCGACCACCTGCT...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCTGGCATAGACCTCCATaGACCAAGCATGGTATGCAA +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPWHRPP*TKHGMQ
Trigger: TTGCATACCATGCTTGGTGCATGGAGGTCTATGCCA...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCATGCTCCCCTGGTCTaGACAGGTCTCCATGTTGCT +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNHAPLV*TGLHVA
Trigger: AGCAACATGGAGACCTGTGCAGACCAGGGGAGCATG...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGAACCTTGAAGTTACATaGTCCCCTGGTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWNLEVT*SPGLHR
Trigger: CCTGTGCAGACCAGGGGAGCATGTAACTTCAAGGTT...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGACTGACTGTACCAGATaGTCATCATCTGCATTTCGC +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGTDCTR*SSSAFR
Trigger: GCGAAATGCAGATGATGAGCATCTGGTACAGTCAGT...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGGATGGAGCCATTTTGTaGTTTCAAGAGCTGATAGCC +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGDGAIL*FQELIA
Trigger: GGCTATCAGCTCTTGAAAGCACAAAATGGCTCCATC...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTACACAGTCAAGCCACTaGAGAAACACTGGGCAACGT +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPTQSSH*RNTGQR
Trigger: ACGTTGCCCAGTGTTTCTGCAGTGGCTTGACTGTGT...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGACACAGTCAAGCCACTaGAGAAACACTGGGCAACGT +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLTQSSH*RNTGQR
Trigger: ACGTTGCCCAGTGTTTCTGCAGTGGCTTGACTGTGT...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGTCTCCTTGGCGTTGTTaGACAGGAATGTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVSPWRC*TGMFQT
Trigger: TGTTTGGAACATTCCTGTGCAACAACGCCAAGGAGA...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAGAGCGCCGGTGCTCCTaGCACTTCTCGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPERRCS*HFSFRL
Trigger: CAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTC...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTCTGCTGTTCAGAAATaGCCTGTGAGAACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWSAVQK*PVRTEA
Trigger: GGCCTCTGTTCTCACAGGGCATTTCTGAACAGCAGA...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCACACTGAGCCCACTCTaGTGTTCAGAAATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCTLSPL*CSEMPC
Trigger: ACAGGGCATTTCTGAACAGCAGAGTGGGCTCAGTGT...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTGAGGAAGCCTGTCCTTaGCACTATTTACAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGEEACP*HYLQGK
Trigger: CTTGCCTTGTAAATAGTGGCAAGGACAGGCTTCCTC...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGACCAAGGGAAGTCCTATaGACCACAGACCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGPREVL*TTDPTW
Trigger: CCAAGTGGGGTCTGTGGTGCATAGGACTTCCCTTGG...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCCCAAGGGAAGTCCTATaGACCACAGACCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLPREVL*TTDPTW
Trigger: CCAAGTGGGGTCTGTGGTGCATAGGACTTCCCTTGG...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCTGCAGCCACTTGTGGTaGAAGTTCCTTGAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTCSHLW*KFLECK
Trigger: CTTACACTCAAGGAACTTGCACCACAAGTGGCTGCA...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGAAAGTTTCTACTTCCTaGTGGTGGCCTGACTCAATC +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLKVSTS*WWPDSI
Trigger: GATTGAGTCAGGCCACCAGCAGGAAGTAGAAACTTT...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCCTCTCTGTGTGGAGAGAGGGCGGGAAGGAGACCTCTAGTTGACTGCATAACCTGCAGTGGTGCTTCCTaGTGGCAAGCCAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSLCGERAGRRPLVDCITCSGAS*WQARRH
Trigger: GTGCCTTCTGGCTTGCCAGCAGGAAGCACCACTGCA...GGTTATGCAGTCAACTAGAGGTCTCCTTCCCGCCCTCTCTCCACACAGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCCCAGTTCAAGGTCAATaGTGGAGCTTGTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPPVQGQ*WSLWDV
Trigger: TACATCCCACAAGCTCCAGCATTGACCTTGAACTGG...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCCCAGTTCAAGGTCAATaGTGGAGCTTGTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPPVQGQ*WSLWDV
Trigger: TACATCCCACAAGCTCCAGCATTGACCTTGAACTGG...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGTCTACAATCCAGTGGTaGATCCCAAATCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVSTIQW*IPNLSL
Trigger: GAGTGACAGATTTGGGATGCACCACTGGATTGTAGA...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACTGCTCTTGGGGAATATaGTTCCAGCCTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNCSWGI*FQPPQQ
Trigger: CTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCA...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCATGCCATTTACCGTGTaGCTCTCCCTCCAAACATCA +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTMPFTV*LSLQTS
Trigger: TGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCATGCCATTTACCGTGTaGCTCTCCCTCCAAACATCA +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPMPFTV*LSLQTS
Trigger: TGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGCAGCAGCCAGACAAGTaGCCACTCAGACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKQQPDK*PLRQPG
Trigger: TCCTGGCTGTCTGAGTGGGCACTTGTCTGGCTGCTG...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCCTCACTGAGGAAAGGTaGCCTGAATCTCCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSLTEER*PESPQG
Trigger: GCCTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAG...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACGTTCAAACTGTGTTaGCACTGGAAGTCAGAGACG +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPTFKLC*HWKSET
Trigger: CGTCTCTGACTTCCAGTGGCAACACAGTTTGAACGT...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGCCAGAGTACTGGCTaGCCTGAAATCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLGQSTG*PEIRAA
Trigger: TGCTGCTCTGATTTCAGGGCAGCCAGTACTCTGGCC...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGGAAAGATCTGATTaGCCTGGATGCACTCAAGGC +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPWERSD*PGCTQG
Trigger: GCCTTGAGTGCATCCAGGCCAATCAGATCTTTCCCA...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCGGATCAGCTGCTTCCTaGGAAAGATCTGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSAGSAAS*ERSDWP
Trigger: AGGCCAATCAGATCTTTCCCAGGAAGCAGCTGATCC...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCCAGAGGCACAAGCTTTaGCTACTGACTGTACCAGAT +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPQRHKL*LLTVPD
Trigger: ATCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTG...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGCAGAGGCACAAGCTTTaGCTACTGACTGTACCAGAT +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEQRHKL*LLTVPD
Trigger: ATCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTG...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCAAAGGTCTCCCCCATTaGGAAAGTCTCGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPKGLPH*ESLEKC
Trigger: ACACTTCTCGAGACTTTCCCAATGGGGGAGACCTTT...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGAAAGGTCTCCCCCATTaGGAAAGTCTCGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEKGLPH*ESLEKC
Trigger: ACACTTCTCGAGACTTTCCCAATGGGGGAGACCTTT...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCGCTTCTGCGGTTGGATaGCTAAACTCTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSASAVG*LNSLLL
Trigger: CAGGAGCAGAGAGTTTAGCCATCCAACCGCAGAAGC...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCCAATTTCCCGGATCTaGCATCTGAGTGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSPISRI*HLSAQQ
Trigger: TTGCTGTGCACTCAGATGCCAGATCCGGGAAATTGG...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGCCTGGAAACCCTCTATaGTTCGGTAATAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWPGNPL*FGNKGP
Trigger: TGGACCCTTATTACCGAACCATAGAGGGTTTCCAGG...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCTTTCCCCTCTCTCCTTaGCGTTGTTGCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSAFPLSP*RCCTGM
Trigger: CATTCCTGTGCAACAACGCCAAGGAGAGAGGGGAAA...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGGCTGGTGCCTGGGGCTaGGTATGGTGCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKAGAWG*VWCTAV
Trigger: GACAGCTGTGCACCATACCCAGCCCCAGGCACCAGC...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCGCTGGTGCCTGGGGCTaGGTATGGTGCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLAGAWG*VWCTAV
Trigger: GACAGCTGTGCACCATACCCAGCCCCAGGCACCAGC...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCGGGGATCATCAGGGCTaGTGCCTGGGGCTGGGTATG +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSGDHQG*CLGLGM
Trigger: CATACCCAGCCCCAGGCACCAGCCCTGATGATCCCC...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTGTTGTCACAGGCTGTaGTCAGATTGTCGTATGATC +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRCCHRL*SDCRMI
Trigger: GATCATACGACAATCTGACCACAGCCTGTGACAACA...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCACTTCTCGTTCAGGCTaGGGTCGCTGCAGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GCHLPCASPSKHQPHLSITSRSG*GRCSAG
Trigger: GCCGGCGCTGCAGCGACCCCAGCCTGAACGAGAAGT...GATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCCTCCACTCTCCTCTTTaGTGGCCTCCTGCAAGATGT +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSLHSPL*WPPARC
Trigger: ACATCTTGCAGGAGGCCACCAAAGAGGAGAGTGGAG...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGACTTGGTGAAGTCCAATaGCTGAGGCCTCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SRSQISILLALTTILPPGLGEVQ*LRPQVS
Trigger: AGACACCTGAGGCCTCAGCCATTGGACTTCACCAAG...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTAGCATCACCCAGTTCTaGGTCTTGGTGAAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGSITQF*VLVKSN
Trigger: ATTGGACTTCACCAAGACCCAGAACTGGGTGATGCT...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTAGCATCACCCAGTTCTaGGTCTTGGTGAAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVSITQF*VLVKSN
Trigger: ATTGGACTTCACCAAGACCCAGAACTGGGTGATGCT...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTCAGCTCATATCCAGATaGCTCCTCAGAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPQLISR*LLRAAS
Trigger: TGATGCTGCTCTGAGGAGCCATCTGGATATGAGCTG...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGCAGCTCATATCCAGATaGCTCCTCAGAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRQLISR*LLRAAS
Trigger: TGATGCTGCTCTGAGGAGCCATCTGGATATGAGCTG...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGGGGAATATGCTCCACGTTTGGTCCTCTaGTCTCAAAAGGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: SSSQEGDDAQGSALGEYAPRLVL*SQKGLG
Trigger: CCCAAGTCCCTTTTGAGACCAGAGGACCAAACGTGG...AGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGAACTGTCCACGTTTaGTCCTCTGGTCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPRTVHV*SSGLKR
Trigger: CCTTTTGAGACCAGAGGACCAAACGTGGACAGTTCT...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTTGTCTCTGAAGGGCTaGGTTCCATGGTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPLSLKG*VPWSEE
Trigger: TTCCTCAGACCATGGAACCCAGCCCTTCAGAGACAA...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCCTGTTTTCAGTCTCTaGGGCACCATTGCACACAAG +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSPVFSL*GTIAHK
Trigger: CTTGTGTGCAATGGTGCCCCAGAGACTGAAAACAGG...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCATGGCGCAATGCCCATTaGGTGTGGGGTACATCTGGA +
Preference number: 4 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTAWRNAH*VWGTSG
Trigger: TCCAGATGTACCCCACACCCAATGGGCATTGCGCCA...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCTACCAGCCTCCCCATTaGCGCAATGCCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCYQPPH*RNAHWV
Trigger: CACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTA...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTGAGCTGGTCAGGTACTaGCTCTCCAGGCGACTCTTC +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVELVRY*LSRRLF
Trigger: GAAGAGTCGCCTGGAGAGCCAGTACCTGACCAGCTC...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGGGAACTGGAACCTTCTaGTTACAACAACTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWGTGTF*LQQLEQ
Trigger: CTGCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCC...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGGGAACTGGAACCTTCTaGTTACAACAACTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEGTGTF*LQQLEQ
Trigger: CTGCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCC...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGGTTCAAGGTCAATGCTaGAGCTTGTGGGATGTAGGC +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRVQGQC*SLWDVG
Trigger: GCCTACATCCCACAAGCTCCAGCATTGACCTTGAAC...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTAGCTTCAGTTGGAAGTaGCAGCAATGGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVSFSWK*QQWAYP
Trigger: TGGATAAGCCCATTGCTGCCACTTCCAACTGAAGCT...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGATCTGCCCAGGTTGAGTaGGCCTGTCATAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGSAQVE*ACHRNS
Trigger: GCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGA...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTCAGTTACAGTGGGCCTaGCAACCCTTGGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATQLQWA*QPLVFH
Trigger: ATGGAAGACCAAGGGTTGCCAGGCCCACTGTAACTG...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGACGGTGGCGTGAGGAATaGTTGCATGTTAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGRWREE*LHVSTG
Trigger: GCCAGTGCTAACATGCAACCATTCCTCACGCCACCG...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCAACCAGCTCTGATGTaGCGGTGGCGTGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPQPALM*RWREEW
Trigger: CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTG...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCGACCAGGCCCCAGAATaGGGACCCAGGTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSDQAPE*GPRCVW
Trigger: CCAGACACACCTGGGTCCCCATTCTGGGGCCTGGTC...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCGAAAGGCTGATTGTATaGGACCTGCTCCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPERLIV*DLLPFP
Trigger: TGGAAAAGGGAGCAGGTCCCATACAATCAGCCTTTC...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGAAACTGTGTTGCCACTaGAAGTCAGAGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWKLCCH*KSETCS
Trigger: TGAGCACGTCTCTGACTTCCAGTGGCAACACAGTTT...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGAGGTTCCTCTCTGTGTaGAGAGAGGGCGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKRFLSV*REGGKE
Trigger: CTCCTTCCCGCCCTCTCTCCACACAGAGAGGAACCT...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCAGCCTGAAGCAAGCTaGCCTTGCCCACAGAGAACT +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPAQPEAS*PCPQRT
Trigger: AGTTCTCTGTGGGCAAGGCCAGCTTGCTTCAGGCTG...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGTGCAGTTGTGTGCTaGGGACAGCAGGACTCGTGT +
Preference number: 4 (lower is better)
Translates to: SALGEYASSLPSSKGFPTSAVVC*GQQDSC
Trigger: ACACGAGTCCTGCTGTCCCCAGCACACAACTGCACT...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCAAGCAGGGAGGCTACTaGTATCTGCACACAACATGC +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSAKQGGY*YLHTTC
Trigger: GCATGTTGTGTGCAGATACCAGTAGCCTCCCTGCTT...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ACGTGCTCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTTCCTGGGAAAGATCTaGTTGGCCTGGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: TCSDALGFAWTESTREAFFLGKI*LAWMHS
Trigger: TGAGTGCATCCAGGCCAATCAGATCTTTCCCAGGAA...GAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTTTCCTGGGAAAGATCTaGTTGGCCTGGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATFLGKI*LAWMHS
Trigger: TGAGTGCATCCAGGCCAATCAGATCTTTCCCAGGAA...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGATCCAGGCAGGCACTATaGGCTCTTGAGGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGSRQAL*ALEDSY
Trigger: GTAGCTATCCTCAAGAGCTCATAGTGCCTGCCTGGA...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCCAGGACCTGAAACTTaGTACACTTTCCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVPGPET*YTFQFF
Trigger: AAAGAACTGGAAAGTGTATCAAGTTTCAGGTCCTGG...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGCCAGGACCTGAAACTTaGTACACTTTCCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRPGPET*YTFQFF
Trigger: AAAGAACTGGAAAGTGTATCAAGTTTCAGGTCCTGG...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGCCAGGACCTGAAACTTaGTACACTTTCCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLPGPET*YTFQFF
Trigger: AAAGAACTGGAAAGTGTATCAAGTTTCAGGTCCTGG...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTTGCGCTTCCAGGACCTaGAACTTGATACACTTTCCA +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGCASRT*NLIHFP
Trigger: TGGAAAGTGTATCAAGTTTCAGGTCCTGGAAGCGCA...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGAAGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTTGCCCTCTTTTAGCTCTGGTGCCTGTAGATaGCGGCAGGGATGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RRRNSCQVRSLTALPSFSSGACR*RQGCAS
Trigger: GGAAGCGCATCCCTGCCGTCATCTACAGGCACCAGA...GCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGACAAGCTTTGGCTACTaGCTGTACCAGATGCTCATC +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWTSFGY*LYQMLI
Trigger: GATGAGCATCTGGTACAGTCAGTAGCCAAAGCTTGT...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCACAAGCTTTGGCTACTaGCTGTACCAGATGCTCATC +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSATSFGY*LYQMLI
Trigger: GATGAGCATCTGGTACAGTCAGTAGCCAAAGCTTGT...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TCCCTGTGCTGGCTGAGGAAGAGATTGTTTAGGGGACCAGGCCCCAGAATGGGGAGAAGTGTTCCTAGTTaGCAGCTTGCTGCCACTCGA +
Preference number: 4 (lower is better)
Translates to: SLCWLRKRLFRGPGPRMGRSVPS*QLAATR
Trigger: TCGAGTGGCAGCAAGCTGTCAACTAGGAACACTTCT...CCCCATTCTGGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCAGCACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTCTCCTCCGAATAGAATaGATGTTTGCCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGLLRIE*MFAIPI
Trigger: TATGGGGATGGCAAACATTCATTCTATTCGGAGGAG...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGAGCAACCGCAGAGACTaGAAACTCCTCCGAATAGAA +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLSNRRD*KLLRIE
Trigger: TTCTATTCGGAGGAGTTTTCAGTCTCTGCGGTTGCT...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCAGAAGCACAGACAAGTaGTGGAGCCATTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTRSTDK*WSHFVL
Trigger: AAGCACAAAATGGCTCCATCACTTGTCTGTGCTTCT...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGCACTACCAGAAGCGCTaGTTTCAGAAGCACAGACAA +
Preference number: 4 (lower is better)
Translates to: PAAKGSQPALMWRWREEWHYQKR*FQKHRQ
Trigger: TTGTCTGTGCTTCTGAAATCAGCGCTTCTGGTAGTG...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTGAACTGTCCGAGTTCTCCCCATaGCCACACCGGTCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LLQSGGYSCSPGDRSLELSEFSP*PHRSAN
Trigger: ATTTGCTGACCGGTGTGGTCATGGGGAGAACTCGGA...CAGTTCAAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGGGGAATATGCTGAACATGTCCGTTCCTaGGTATGCTTTTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SSSQEGDDAQGSALGEYAEHVRS*VCFSPL
Trigger: GAGAGGGGAAAAGCATACTCAGGAACGGACATGTTC...AGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAATACAGTAGGTTTTTaGAAGCCTTGTTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPNTVGF*KPCCLP
Trigger: GGGCAGGCAACAAGGCTTTCAAAAACCTACTGTATT...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCAATACAGTAGGTTTTTaGAAGCCTTGTTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPNTVGF*KPCCLP
Trigger: GGGCAGGCAACAAGGCTTTCAAAAACCTACTGTATT...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTAGCACGGCTTCTGACTaGGAGGAATACAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSSTASD*EEYSRF
Trigger: AAACCTACTGTATTCCTCTCAGTCAGAAGCCGTGCT...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCAGCACGGCTTCTGACTaGGAGGAATACAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSASTASD*EEYSRF
Trigger: AAACCTACTGTATTCCTCTCAGTCAGAAGCCGTGCT...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGAGTTCTGGGTCTTGGTaGAGTCCAATGGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: DTPCPWSGNCYQGEEEYRSSGSW*SPMAEA
Trigger: GGCCTCAGCCATTGGACTTCACCAAGACCCAGAACT...CCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCAGTTCTGGGTCTTGGTaGAGTCCAATGGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCSSGSW*SPMAEA
Trigger: GGCCTCAGCCATTGGACTTCACCAAGACCCAGAACT...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCCAGCTGACGGCTCAGTaGGTCCTTGCTCCTACCAGC +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSQLTAQ*VLAPTS
Trigger: GCTGGTAGGAGCAAGGACTCACTGAGCCGTCAGCTG...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCATAGCAGACAGCTaGCGGCTCAGTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPLIADS*RLSESL
Trigger: CAAGGACTCACTGAGCCGTCAGCTGTCTGCTATGAG...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCGTGTCTGTGTACACTaGCATGCCATCATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPARVCVH*HAIIVQ
Trigger: CTGGACGATGATGGCATGTCAGTGTACACAGACACG...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTGGCAGGCTTTGGCCTTaGCTGCATAAACATTTTGAC +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGGRLWP*LHKHFD
Trigger: GTCAAAATGTTTATGCAGTCAAGGCCAAAGCCTGCC...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGATTTCCCTGTGCTGGCTaGGGAAGAGATTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: SRSQISILLALTTILPPGFPCAG*GRDCLG
Trigger: CCCTAAACAATCTCTTCCTCAGCCAGCACAGGGAAA...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCGGGCTTTGCCTGGACTaGGAGCACCAGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLGLCLD*EHQGSL
Trigger: AAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCC...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAACCCACAGACCCATGTaGTGGGAGGGATGCCCAACA +
Preference number: 4 (lower is better)
Translates to: ETHLALGQGTATKGKRNTTHRPM*WEGCPT
Trigger: TGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGT...TGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCTCTGATTGGCCTGGATaGACTCAAGGCTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCSDWPG*TQGCAE
Trigger: CTCGGCACAGCCTTGAGTGCATCCAGGCCAATCAGA...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGCCCACAAACTCTGTaGTCTCTCCATGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSGPQTL*SLHEVQ
Trigger: TTGAACTTCATGGAGAGAGCACAGAGTTTGTGGGCC...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCTGGCATAGACCTCCATaGACCAAGCATGGTATGCAA +
Preference number: 4 (lower is better)
Translates to: SDALGFAWTESTREAFWAWHRPP*TKHGMQ
Trigger: TTGCATACCATGCTTGGTGCATGGAGGTCTATGCCA...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTCATGCTCCCCTGGTCTaGACAGGTCTCCATGTTGCT +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVHAPLV*TGLHVA
Trigger: AGCAACATGGAGACCTGTGCAGACCAGGGGAGCATG...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTACTGACTGTACCAGATaGTCATCATCTGCATTTCGC +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGTDCTR*SSSAFR
Trigger: GCGAAATGCAGATGATGAGCATCTGGTACAGTCAGT...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGAAGATCAAAAGCTTCTaGGGTTGGATGGCTAAACTC +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRKIKSF*GWMAKL
Trigger: GAGTTTAGCCATCCAACCGCAGAAGCTTTTGATCTT...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTGATCTGGCATCTGAGTaGACAGCAACCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASDLASE*TATAET
Trigger: AGTCTCTGCGGTTGCTGTGCACTCAGATGCCAGATC...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCTCCTTGGCGTTGTTaGACAGGAATGTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVESPWRC*TGMFQT
Trigger: TGTTTGGAACATTCCTGTGCAACAACGCCAAGGAGA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTGAACTGGCAGGGCAGGTACACTaGACTCCACAGCATCAGGTT +
Preference number: 4 (lower is better)
Translates to: LLQSGGYSCSPGDRSLELAGQVH*TPQHQV
Trigger: AACCTGATGCTGTGGAGTGCAGTGTACCTGCCCTGC...CAGTTCAAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCGCAGGGCAGGTACACTaGACTCCACAGCATCAGGTT +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCAGQVH*TPQHQV
Trigger: AACCTGATGCTGTGGAGTGCAGTGTACCTGCCCTGC...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTTCTAGTGAGCGCCGGTaGTCCTGCCACTTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASSSERR*SCHFSF
Trigger: GAACGAGAAGTGGCAGGAGCACCGGCGCTCACTAGA...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTGAGGCAGGGCCAGCCAGGCTaGTCAGCTCTAGTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: IYRVPLPPNISLIYPSVRQGQPG*SALVSA
Trigger: GGCGCTCACTAGAGCTGAGCAGCCTGGCTGGCCCTG...CCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACAAGATGTTCTCCATCTaGCCCTCAGCTACTCCGGCT +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNKMFSI*PSATPA
Trigger: AGCCGGAGTAGCTGAGGGGCAGATGGAGAACATCTT...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTCAGGTGTCTTCCTCCTaGTCTCCTTTTCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGQVSSS*SPFLRE
Trigger: CTCTCTTAGAAAAGGAGAGCAGGAGGAAGACACCTG...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCAGGTGTCTTCCTCCTaGTCTCCTTTTCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSQVSSS*SPFLRE
Trigger: CTCTCTTAGAAAAGGAGAGCAGGAGGAAGACACCTG...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCACCATAGCCAACTTTTaGATCTACTGGGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWATIANF*IYWDWK
Trigger: CTTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGT...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGGAGGAAGCCTGTCCTTaGCACTATTTACAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPREEACP*HYLQGK
Trigger: CTTGCCTTGTAAATAGTGGCAAGGACAGGCTTCCTC...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTGAGGAAGCCTGTCCTTaGCACTATTTACAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGEEACP*HYLQGK
Trigger: CTTGCCTTGTAAATAGTGGCAAGGACAGGCTTCCTC...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCTCTCTGGGGCACCATTaGACACAAGCCCCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: SALGEYASSLPSSKGFPTSLGHH*TQAPLY
Trigger: GTAAAGAGGGGCTTGTGTGCAATGGTGCCCCAGAGA...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCTGCAGCCACTTGTGGTaGAAGTTCCTTGAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSACSHLW*KFLECK
Trigger: CTTACACTCAAGGAACTTGCACCACAAGTGGCTGCA...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTTCCTGAGTGGCTATaGAGCCACTTGTGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASLPEWL*SHLWCK
Trigger: CTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAG...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCCTGTGTACACTGACATaGCATCATCGTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLLCTLT*HHRPGG
Trigger: GCCACCTGGACGATGATGGCATGTCAGTGTACACAG...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTGTGTACACTGACATaGCATCATCGTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASLCTLT*HHRPGG
Trigger: GCCACCTGGACGATGATGGCATGTCAGTGTACACAG...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCAAAGTTTCTACTTCCTaGTGGTGGCCTGACTCAATC +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTKVSTS*WWPDSI
Trigger: GATTGAGTCAGGCCACCAGCAGGAAGTAGAAACTTT...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTGCTATAGCAAGACTTaGATACTCGACTGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRCYSKT*ILDWVQ
Trigger: TTGAACCCAGTCGAGTATGCAAGTCTTGCTATAGCA...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCTACAATCCAGTGGTaGATCCCAAATCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVESTIQW*IPNLSL
Trigger: GAGTGACAGATTTGGGATGCACCACTGGATTGTAGA...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAGTGGCAAAGGGGGACTaGTCAGCAGTTATTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGVAKGD*SAVIPV
Trigger: GACAGGAATAACTGCTGAGCAGTCCCCCTTTGCCAC...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTCAGCAGCCAGACAAGTaGCCACTCAGACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASQQPDK*PLRQPG
Trigger: TCCTGGCTGTCTGAGTGGGCACTTGTCTGGCTGCTG...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTAGGAAATGCGTTCAGTaGTTGAACATCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGRKCVQ*LNIMVR
Trigger: CCTCACCATGATGTTCAAGCACTGAACGCATTTCCT...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGATTGAAGTGACTAGATaGCACAGTCCTGCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRIEVTR*HSPAVR
Trigger: TCTTACAGCAGGACTGTGGCATCTAGTCACTTCAAT...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTCAGGGCAATTCCTTaGCTTGGATCCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASLRAIP*LGSSLH
Trigger: GTGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGAG...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTCTGCCTTTCTCCATATaGAGCCACCTCCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASLPFSI*SHLPQG
Trigger: GCCCTGAGGGAGGTGGCTGCATATGGAGAAAGGCAG...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCTTAGCCCTCACCTACTaGAATCAGGTGGATACAGCT +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSALALTY*NQVDTA
Trigger: AGCTGTATCCACCTGATTGCAGTAGGTGAGGGCTAA...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGTTCAGTGCAGTTGTGTaGTGGGGACAGCAGGACTCG +
Preference number: 4 (lower is better)
Translates to: DTPCPWSGNCYQGEEEYRFSAVV*WGQQDS
Trigger: CGAGTCCTGCTGTCCCCAGCACACAACTGCACTGAA...CCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTCAGAGAAAATCTCTGTaGTGCAGCGAGACAAACAGT +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGQRKSL*CSETNS
Trigger: ACTGTTTGTCTCGCTGCAGCACAGAGATTTTCTCTG...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS-3UTR GCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCAATTCCTGCAGTGGTaGTTCCTGCTGGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMQFLQW*FLLASQ
Trigger: CTGGCTTGCCAGCAGGAAGCACCACTGCAGGAATTG...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTTGGGAAAGATCTGATTaGCCTGGATGCACTCAAGGC +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATWERSD*PGCTQG
Trigger: GCCTTGAGTGCATCCAGGCCAATCAGATCTTTCCCA...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCGGATCAGCTGCTTCCTaGGAAAGATCTGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSGSAAS*ERSDWP
Trigger: AGGCCAATCAGATCTTTCCCAGGAAGCAGCTGATCC...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCTTCTATTTTAGCAGGTaGTCGGATTGCGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: TLPFQSARASRSAQVEWAFYFSR*SDCVVQ
Trigger: CTGAACAACGCAATCCGACCACCTGCTAAAATAGAA...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCGTTGCTCTTTTTCACTaGCATAGACCTCCATGCACC +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSAVALFH*HRPPCT
Trigger: GGTGCATGGAGGTCTATGCCAGTGAAAAAGAGCAAC...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGGTTGCTCTTTTTCACTaGCATAGACCTCCATGCACC +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLVALFH*HRPPCT
Trigger: GGTGCATGGAGGTCTATGCCAGTGAAAAAGAGCAAC...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCAAGTTACATGCTCCCCTaGTCTGCACAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTASYMLP*SAQVSM
Trigger: CATGGAGACCTGTGCAGACCAGGGGAGCATGTAACT...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTAGTTACATGCTCCCCTaGTCTGCACAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASSYMLP*SAQVSM
Trigger: CATGGAGACCTGTGCAGACCAGGGGAGCATGTAACT...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCAAAAGCTTCTGCGGTTaGATGGCTAAACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPKSFCG*MAKLSA
Trigger: AGCAGAGAGTTTAGCCATCCAACCGCAGAAGCTTTT...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTGTTTGGGTAATACTCTaGGCATTCGCAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPAVWVIL*AFAASS
Trigger: GGAGGAGGCTGCGAATGCCCAGAGTATTACCCAAAC...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGCACAACTTCACAGTTTaGGTAATACTCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRHNFTV*VILWAF
Trigger: GAATGCCCAGAGTATTACCCAAACTGTGAAGTTGTG...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAATCAGGTTACGCACATaGCACACAGGGTACAGCACG +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGIRLRT*HTGYST
Trigger: CGTGCTGTACCCTGTGTGCCATGTGCGTAACCTGAT...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCCTCCACTCTCCTCTTTaGTGGCCTCCTGCAAGATGT +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLLHSPL*WPPARC
Trigger: ACATCTTGCAGGAGGCCACCAAAGAGGAGAGTGGAG...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTTGGTGAAGTCCAATaGCTGAGGCCTCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASLGEVQ*LRPQVS
Trigger: AGACACCTGAGGCCTCAGCCATTGGACTTCACCAAG...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTAGCATCACCCAGTTCTaGGTCTTGGTGAAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPSITQF*VLVKSN
Trigger: ATTGGACTTCACCAAGACCCAGAACTGGGTGATGCT...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGGTCTCAAAAGGGACTTaGGAAGGTAGCAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWVSKGT*EGSREH
Trigger: ATGTTCTCTGCTACCTTCCCAAGTCCCTTTTGAGAC...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTAGAACTGTCCACGTTTaGTCCTCTGGTCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPRTVHV*SSGLKR
Trigger: CCTTTTGAGACCAGAGGACCAAACGTGGACAGTTCT...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAGAACTGTCCACGTTTaGTCCTCTGGTCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRRTVHV*SSGLKR
Trigger: CCTTTTGAGACCAGAGGACCAAACGTGGACAGTTCT...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCAGAACTGTCCACGTTTaGTCCTCTGGTCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSARTVHV*SSGLKR
Trigger: CCTTTTGAGACCAGAGGACCAAACGTGGACAGTTCT...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGTTCCTTGAGTGTAAGTaGGCAGAGCTGCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRFLECK*AELQLI
Trigger: TATGAGCTGCAGCTCTGCCCACTTACACTCAAGGAA...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCTATGCAGCCACTTGTaGTGCAAGTTCCTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSLCSHL*CKFLEC
Trigger: ACACTCAAGGAACTTGCACCACAAGTGGCTGCATAG...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACAGTGGGCGGCCAGGTaGTCAGGAAGCCAACGGGTC +
Preference number: 4 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQQWAAR*SGSQRV
Trigger: GACCCGTTGGCTTCCTGACCACCTGGCCGCCCACTG...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTCAATGCTGGAGCTTGTaGGATGTAGGCTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATQCWSL*DVGCYS
Trigger: GCTATAGCAGCCTACATCCCACAAGCTCCAGCATTG...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGAAGTGGCAGCAATaGGCTTATCCAGTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPWKWQQ*AYPVQG
Trigger: ACCTTGAACTGGATAAGCCCATTGCTGCCACTTCCA...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGTGGAAGTGGCAGCAATaGGCTTATCCAGTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLWKWQQ*AYPVQG
Trigger: ACCTTGAACTGGATAAGCCCATTGCTGCCACTTCCA...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAGCTTCAGTTGGAAGTaGCAGCAATGGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRSFSWK*QQWAYP
Trigger: TGGATAAGCCCATTGCTGCCACTTCCAACTGAAGCT...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCAGCTTCAGTTGGAAGTaGCAGCAATGGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: SDALGFAWTESTREAFWASFSWK*QQWAYP
Trigger: TGGATAAGCCCATTGCTGCCACTTCCAACTGAAGCT...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTTCTGCCCAGGTTGAGTaGGCCTGTCATAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVSAQVE*ACHRNS
Trigger: GCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGA...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTGTCACTCTGTACAGGTaGTTCCACGCTCCCATTCCA +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASVTLYR*FHAPIP
Trigger: TGGAATGGGAGCGTGGAACCACCTGTACAGAGTGAC...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCTGGATTTCCCTGTGCTaGCTGAGGAAGAGATTGTTT +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPWISLC*LRKRLF
Trigger: AAACAATCTCTTCCTCAGCCAGCACAGGGAAATCCA...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCATGATTGGTTTGGTTTaGGAACGGGGGATTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPMIGLV*ERGISG
Trigger: TCCAGAAATCCCCCGTTCCCAAACCAAACCAATCAT...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTTCAGACAGCCAGGAGTaGCAAAGGGGGACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASSDSQE*QRGTAQ
Trigger: CTGAGCAGTCCCCCTTTGCCACTCCTGGCTGTCTGA...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACATCAGACAGCCAGGAGTaGCAAAGGGGGACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ETHLALGQGTATKGKRNTSDSQE*QRGTAQ
Trigger: CTGAGCAGTCCCCCTTTGCCACTCCTGGCTGTCTGA...TGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTTACGAAGTCACCAAGTaGCCCTTCACTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPYEVTK*PFTAGQ
Trigger: CTGGCCAGCAGTGAAGGGCCACTTGGTGACTTCGTA...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGCGTATCATAACCTCTTaGCACCTGTCACTAGGAAAT +
Preference number: 4 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRRIITS*HLSLGN
Trigger: ATTTCCTAGTGACAGGTGCCAAGAGGTTATGATACG...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCAAGAGTGAAGGCCTCTaGGGAGCTCTGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCKSEGL*GALSRS
Trigger: TGACCTGCTCAGAGCTCCCCAGAGGCCTTCACTCTT...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTAGCTGTAACTTGTTTTaGACTGCAGTTACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGSCNLF*TAVTEA
Trigger: GGCCTCTGTAACTGCAGTCCAAAACAAGTTACAGCT...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 72 bp TTCTCCATATGCAGCCACCTCCCTCAGGGCAATTCCTaGCCTTGGATCCTCACTGCACCTGCTTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: FSICSHLPQGNS*PWILTAPASPA
Trigger: TGCTGGTGAAGCAGGTGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGAGGGAGGTGGCTGCATATGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACGAGTCTCTTCATCCATaGCAAGAGGCCCAGATTAGG +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNESLHP*QEAQIR
Trigger: CCTAATCTGGGCCTCTTGTCATGGATGAAGAGACTC...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTCAAGGAAAGGAACCTaGAGATTCTCATCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLSRKGT*RFSSSR
Trigger: CCGGGAGGATGAGAATCTTCAGGTTCCTTTCCTTGA...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTTCTGTGCTCTCTCCATaGAGTTCAAGGAAAGGAACC +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATSVLSP*SSRKGT
Trigger: GGTTCCTTTCCTTGAACTTCATGGAGAGAGCACAGA...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCTCGTTTTTAAACCTTaGAGTTACATGCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSLVFKP*SYMLPW
Trigger: CCAGGGGAGCATGTAACTTCAAGGTTTAAAAACGAG...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCTCGTTTTTAAACCTTaGAGTTACATGCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCLVFKP*SYMLPW
Trigger: CCAGGGGAGCATGTAACTTCAAGGTTTAAAAACGAG...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTTCCAGGCAGGCACTATaGGCTCTTGAGGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVSRQAL*ALEDSY
Trigger: GTAGCTATCCTCAAGAGCTCATAGTGCCTGCCTGGA...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTTGCGCTTCCAGGACCTaGAACTTGATACACTTTCCA +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATCASRT*NLIHFP
Trigger: TGGAAAGTGTATCAAGTTTCAGGTCCTGGAAGCGCA...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCAAGAAGTGTTCCTAGTTaGCAGCTTGCTGCCACTCGA +
Preference number: 4 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTARSVPS*QLAATR
Trigger: TCGAGTGGCAGCAAGCTGTCAACTAGGAACACTTCT...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCTCCTCCGAATAGAATaGATGTTTGCCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCLLRIE*MFAIPI
Trigger: TATGGGGATGGCAAACATTCATTCTATTCGGAGGAG...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTAGAAGCACAGACAAGTaGTGGAGCCATTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPRSTDK*WSHFVL
Trigger: AAGCACAAAATGGCTCCATCACTTGTCTGTGCTTCT...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTAGAAGCACAGACAAGTaGTGGAGCCATTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSRSTDK*WSHFVL
Trigger: AAGCACAAAATGGCTCCATCACTTGTCTGTGCTTCT...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCAAGGAATGCTTCATTaGACTCAAAAGAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVQGMLH*TQKSKE
Trigger: TTCCTTGCTCTTTTGAGTTCAATGAAGCATTCCTTG...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGGCAGTTCAGAAATGCCCTGTaGGAACAGAGGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: HLALGQGTATKGKRNTGQFRNAL*EQRPAH
Trigger: ATGAGCTGGCCTCTGTTCTCACAGGGCATTTCTGAA...CTGCCCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTCTCATAGCAGACAGCTaGCGGCTCAGTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASLIADS*RLSESL
Trigger: CAAGGACTCACTGAGCCGTCAGCTGTCTGCTATGAG...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCATTCCTGCTGGTGGCCTaGCTCAATCTGACGCAGGCG +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSFLLVA*LNLTQA
Trigger: CGCCTGCGTCAGATTGAGTCAGGCCACCAGCAGGAA...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCTGTAACTCTAAAGGCTaGTTCTACCCCTTAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTCNSKG*FYPLKG
Trigger: TCCCTTTAAGGGGTAGAATCAGCCTTTAGAGTTACA...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTATAGGAGCACTGACTaGCTCCTCTTTAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWYRSTD*LLFRRK
Trigger: TTTTCTCCTAAAGAGGAGTCAGTCAGTGCTCCTATA...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCGAACTAGTATTGAAGTaGCTAGATGCCACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCELVLK*LDATVL
Trigger: CAGGACTGTGGCATCTAGTCACTTCAATACTAGTTC...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCATTCCCTCTACAGCCTaGAGCAAGCTGGCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLIPSTA*SKLALP
Trigger: GGGCAAGGCCAGCTTGCTTCAGGCTGTAGAGGGAAT...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCTTCTTCAACAGCATCTaGGCCTCATGGGTTATGTTT +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPFFNSI*ASWVMF
Trigger: AAACATAACCCATGAGGCTCAGATGCTGTTGAAGAA...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAAGATCAAAAGCTTCTaGGGTTGGATGGCTAAACTC +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPKIKSF*GWMAKL
Trigger: GAGTTTAGCCATCCAACCGCAGAAGCTTTTGATCTT...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGTCCTTTGGCTCGGTTTaGCACAGCAGCTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMSFGSV*HSSCIG
Trigger: TCCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGA...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTGATCTGGCATCTGAGTaGACAGCAACCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPDLASE*TATAET
Trigger: AGTCTCTGCGGTTGCTGTGCACTCAGATGCCAGATC...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCATGGGGCTGGGTATGGTaGACAGCTGTCGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSWGWVW*TAVVHR
Trigger: CCTGTGGACGACAGCTGTGCACCATACCCAGCCCCA...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATCAGGGCCAGCCAGGCTaGTCAGCTCTAGTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDQGQPG*SALVSA
Trigger: GGCGCTCACTAGAGCTGAGCAGCCTGGCTGGCCCTG...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCCAGGGCCAGCCAGGCTaGTCAGCTCTAGTGAGCGCC +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFQGQPG*SALVSA
Trigger: GGCGCTCACTAGAGCTGAGCAGCCTGGCTGGCCCTG...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CCTCACCTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTTCTGCTGTTCAGAAATaGCCTGTGAGAACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PHLLQSGGYSCSPGDRSLSAVQK*PVRTEA
Trigger: GGCCTCTGTTCTCACAGGGCATTTCTGAACAGCAGA...AAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCAACACTGAGCCCACTCTaGTGTTCAGAAATGCCCTGT +
Preference number: 4 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTATLSPL*CSEMPC
Trigger: ACAGGGCATTTCTGAACAGCAGAGTGGGCTCAGTGT...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTTCTTCTATTCGAAACTaGTCCACAGGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASSSIRN*STGTSR
Trigger: CCTGGAGGTCCCTGTGGAGCAGTTTCGAATAGAAGA...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACACCATAGCCAACTTTTaGATCTACTGGGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNTIANF*IYWDWK
Trigger: CTTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGT...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTTCTCTGGGGCACCATTaGACACAAGCCCCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPSLGHH*TQAPLY
Trigger: GTAAAGAGGGGCTTGTGTGCAATGGTGCCCCAGAGA...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGGGGAATATGCTTGCAGCCACTTGTGGTaGAAGTTCCTTGAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: SSSQEGDDAQGSALGEYACSHLW*KFLECK
Trigger: CTTACACTCAAGGAACTTGCACCACAAGTGGCTGCA...AGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTCATCGTCCAGGTGGCTaGGGGAAGGCTGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGHRPGG*GKAGRG
Trigger: GCCCCGACCAGCCTTCCCGCAGCCACCTGGACGATG...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAACATCGTCCAGGTGGCTaGGGGAAGGCTGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKHRPGG*GKAGRG
Trigger: GCCCCGACCAGCCTTCCCGCAGCCACCTGGACGATG...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCATCGTCCAGGTGGCTaGGGGAAGGCTGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWHRPGG*GKAGRG
Trigger: GCCCCGACCAGCCTTCCCGCAGCCACCTGGACGATG...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTCTGTGTACACTGACATaGCATCATCGTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVLCTLT*HHRPGG
Trigger: GCCACCTGGACGATGATGGCATGTCAGTGTACACAG...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCCCAGTTCAAGGTCAATaGTGGAGCTTGTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSPVQGQ*WSLWDV
Trigger: TACATCCCACAAGCTCCAGCATTGACCTTGAACTGG...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTATGCCATTTACCGTGTaGCTCTCCCTCCAAACATCA +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATMPFTV*LSLQTS
Trigger: TGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTAGGCGCCTAAGGGGATaGCATTTACCGTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASRRLRG*HLPCAS
Trigger: AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCT...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGACCAGTCTGTACTCATaGCTGAGGGTGGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: DTPCPWSGNCYQGEEEYRTSLYS*LRVGSA
Trigger: AGCACTTCCCACCCTCAGGCATGAGTACAGACTGGT...CCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCCAGCAGCCAGACAAGTaGCCACTCAGACAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSQQPDK*PLRQPG
Trigger: TCCTGGCTGTCTGAGTGGGCACTTGTCTGGCTGCTG...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGCCTTGGTCAGGGAACTaGTACCAAGGGGAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: DTPCPWSGNCYQGEEEYRPWSGN*YQGEEE
Trigger: TTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGG...CCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACGTGCTCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTTAGCCCTCACCTACTaGAATCAGGTGGATACAGCT +
Preference number: 4 (lower is better)
Translates to: TCSDALGFAWTESTREAFLALTY*NQVDTA
Trigger: AGCTGTATCCACCTGATTGCAGTAGGTGAGGGCTAA...GAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGCTACAGCAGAACCAATaGTGTTACAATAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVELQQNQ*CYNRQA
Trigger: TGCTTGCCTATTGTAACAGCATTGGTTCTGCTGTAG...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGGGAATCCATGAACCCTaGCTCTGGAAGATAAATAGT +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEGIHEP*LWKINS
Trigger: ACTATTTATCTTCCAGAGGCAGGGTTCATGGATTCC...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTCGTTCCCACAATTCCTaGAGTGGTGCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASRSHNS*SGASCW
Trigger: CCAGCAGGAAGCACCACTGCAGGAATTGTGGGAACG...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAGGATCAGCTGCTTCCTaGGAAAGATCTGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGGSAAS*ERSDWP
Trigger: AGGCCAATCAGATCTTTCCCAGGAAGCAGCTGATCC...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTTCTATTTTAGCAGGTaGTCGGATTGCGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWFYFSR*SDCVVQ
Trigger: CTGAACAACGCAATCCGACCACCTGCTAAAATAGAA...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCCCACCAGCTAACCTCTaGCTGTCCACAGCGGGCAAT +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSPPANL*LSTAGN
Trigger: ATTGCCCGCTGTGGACAGCCAGAGGTTAGCTGGTGG...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCATTTCCACGAGGACCTaGAAACCCTCTATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: SALGEYASSLPSSKGFPTISTRT*KPSMVR
Trigger: CCGAACCATAGAGGGTTTCCAGGTCCTCGTGGAAAT...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTATCAGGTTACGCACATaGCACACAGGGTACAGCACG +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVIRLRT*HTGYST
Trigger: CGTGCTGTACCCTGTGTGCCATGTGCGTAACCTGAT...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGACAACCTGGCAGCTCAAAGTCACAGTTCATGCCCTGTTGCTTCAGACCAAATGCTGGTGCCTGGGGCTaGGTATGGTGCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RQPGSSKSQFMPCCFRPNAGAWG*VWCTAV
Trigger: GACAGCTGTGCACCATACCCAGCCCCAGGCACCAGC...ATTTGGTCTGAAGCAACAGGGCATGAACTGTGACTTTGAGCTGCCAGGTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCTGTTGTCACAGGCTGTaGTCAGATTGTCGTATGATC +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCCCHRL*SDCRMI
Trigger: GATCATACGACAATCTGACCACAGCCTGTGACAACA...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGGCAGCAGCTCATATCCAGATaGCTCCTCAGAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: HLALGQGTATKGKRNTGQQLISR*LLRAAS
Trigger: TGATGCTGCTCTGAGGAGCCATCTGGATATGAGCTG...CTGCCCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCAGCTCATATCCAGATaGCTCCTCAGAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASQLISR*LLRAAS
Trigger: TGATGCTGCTCTGAGGAGCCATCTGGATATGAGCTG...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGAACTTTTGCATCTACTaGGATTGGAAGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLNFCIY*DWKNCF
Trigger: GAAGCAGTTCTTCCAATCCCAGTAGATGCAAAAGTT...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTAAGGGCTGGGTTCCATaGTCTGAGGAAGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASKGWVP*SEEACP
Trigger: AGGACAGGCTTCCTCAGACCATGGAACCCAGCCCTT...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTTGGCGCAATGCCCATTaGGTGTGGGGTACATCTGGA +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASWRNAH*VWGTSG
Trigger: TCCAGATGTACCCCACACCCAATGGGCATTGCGCCA...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTCTATGCAGCCACTTGTaGTGCAAGTTCCTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATLCSHL*CKFLEC
Trigger: ACACTCAAGGAACTTGCACCACAAGTGGCTGCATAG...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTGCTGGCTGGGAACTaGAACCTTCTGGTTACAACA +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASLLAGN*NLLVTT
Trigger: TGTTGTAACCAGAAGGTTCCAGTTCCCAGCCAGCAG...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTGTTCAAGGTCAATGCTaGAGCTTGTGGGATGTAGGC +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASVQGQC*SLWDVG
Trigger: GCCTACATCCCACAAGCTCCAGCATTGACCTTGAAC...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTCACTGAGCTTCAGTTaGAAGTGGCAGCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLSLSFS*KWQQWA
Trigger: AGCCCATTGCTGCCACTTCCAACTGAAGCTCAGTGA...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGTCTGCCCAGGTTGAGTaGGCCTGTCATAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWSAQVE*ACHRNS
Trigger: GCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGA...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGCAATCTACAATCCAGTaGTGCATCCCAAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: GSTLPFQSARASRSAQVEQSTIQ*CIPNLS
Trigger: TGACAGATTTGGGATGCACCACTGGATTGTAGATTG...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACCAAGTGGCCCTTCACTGGCTCTGATGTGGCGGTaGCGTGAGGAATGGTTGCAT +
Preference number: 4 (lower is better)
Translates to: GHVTSLRNPTKSPSGPSLALMWR*REEWLH
Trigger: ATGCAACCATTCCTCACGCCACCGCCACATCAGAGC...CAGTGAAGGGCCACTTGGTGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCCAACCAGCTCTGATGTaGCGGTGGCGTGAGGAATGG +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSQPALM*RWREEW
Trigger: CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTG...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGGCAGGGAACGGGGGATTTCTaGAACCCTGAGTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: HLALGQGTATKGKRNTGQGTGDF*NPESGF
Trigger: AAATCCAGACTCAGGGTTCCAGAAATCCCCCGTTCC...CTGCCCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTGACACACCTTGCCCTTaGTCAGGGAACTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVDTPCP*SGNCYQ
Trigger: TTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCGCTCTGGGCTTTGCCTaGACTGAGAGCACCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLALGFA*TESTRE
Trigger: TTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGC...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTCTGGGCTGGCGCCTCTaGAGCAAGGCACCCCTCAAT +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSLGWRL*SKAPLN
Trigger: ATTGAGGGGTGCCTTGCTCCAGAGGCGCCAGCCCAG...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGCTGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTTGAGGCGAGAGGTACAAACGCCTGCTGGGTaGCACTTACGGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: GCPEIRAAAKNGALRREVQTPAG*HLRLSH
Trigger: GTGTGAAAGCCGTAAGTGCCACCCAGCAGGCGTTTG...TACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTGCTTCACCAGCATCTTaGCTCTTCATCTCCCTACCC +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPASPAS*LFISLP
Trigger: GGGTAGGGAGATGAAGAGCCAAGATGCTGGTGAAGC...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTGAGATGAAGACAACCTaGCAGCTCAAAGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPEMKTT*QLKVTV
Trigger: AACTGTGACTTTGAGCTGCCAGGTTGTCTTCATCTC...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCAGCTGTAACTTGTTTTaGACTGCAGTTACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSASCNLF*TAVTEA
Trigger: GGCCTCTGTAACTGCAGTCCAAAACAAGTTACAGCT...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTTTCCTGGGAAAGATCTaGTTGGCCTGGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPFLGKI*LAWMHS
Trigger: TGAGTGCATCCAGGCCAATCAGATCTTTCCCAGGAA...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCCTCTTCAGCCACTCTTaGCACTGCTCAAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLLFSHS*HCSKVE
Trigger: TTCAACCTTTGAGCAGTGTCAAGAGTGGCTGAAGAG...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACTGCGCTTCCAGGACCTaGAACTTGATACACTTTCCA +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNCASRT*NLIHFP
Trigger: TGGAAAGTGTATCAAGTTTCAGGTCCTGGAAGCGCA...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCATGCGCTTCCAGGACCTaGAACTTGATACACTTTCCA +
Preference number: 4 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTACASRT*NLIHFP
Trigger: TGGAAAGTGTATCAAGTTTCAGGTCCTGGAAGCGCA...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTACAAGCTTTGGCTACTaGCTGTACCAGATGCTCATC +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASTSFGY*LYQMLI
Trigger: GATGAGCATCTGGTACAGTCAGTAGCCAAAGCTTGT...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TCCCTGTGCTGGCTGAGGAAGAGATTGTTTAGGGGACCAGGCCCCAGAATGGGGCTCCTCCGAATAGAATaGATGTTTGCCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: SLCWLRKRLFRGPGPRMGLLRIE*MFAIPI
Trigger: TATGGGGATGGCAAACATTCATTCTATTCGGAGGAG...CCCCATTCTGGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCAGCACAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTAGCAACCGCAGAGACTaGAAACTCCTCCGAATAGAA +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASSNRRD*KLLRIE
Trigger: TTCTATTCGGAGGAGTTTTCAGTCTCTGCGGTTGCT...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGGGGAATATGCTAGAAGCACAGACAAGTaGTGGAGCCATTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SSSQEGDDAQGSALGEYARSTDK*WSHFVL
Trigger: AAGCACAAAATGGCTCCATCACTTGTCTGTGCTTCT...AGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGCAAGGAATGCTTCATTaGACTCAAAAGAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWQGMLH*TQKSKE
Trigger: TTCCTTGCTCTTTTGAGTTCAATGAAGCATTCCTTG...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGGCCTGCCCGAAGAAGTaGCCACACGGAACATGTCCG +
Preference number: 4 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLACPKK*PHGTCP
Trigger: CGGACATGTTCCGTGTGGTCACTTCTTCGGGCAGGC...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGAAATACAGTAGGTTTTTaGAAGCCTTGTTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SRSQISILLALTTILPPGNTVGF*KPCCLP
Trigger: GGGCAGGCAACAAGGCTTTCAAAAACCTACTGTATT...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCAGCACGGCTTCTGACTaGGAGGAATACAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLSTASD*EEYSRF
Trigger: AAACCTACTGTATTCCTCTCAGTCAGAAGCCGTGCT...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGAGTTCTGGGTCTTGGTaGAGTCCAATGGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKSSGSW*SPMAEA
Trigger: GGCCTCAGCCATTGGACTTCACCAAGACCCAGAACT...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTGAGGTTCCTGCTGGTGGCCTaGCTCAATCTGACGCAGGCG +
Preference number: 4 (lower is better)
Translates to: IYRVPLPPNISLIYPSVRFLLVA*LNLTQA
Trigger: CGCCTGCGTCAGATTGAGTCAGGCCACCAGCAGGAA...CCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTGAGGGCCCACCCAGGTCACTaGGCTTCAGTTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: IYRVPLPPNISLIYPSVRAHPGH*ASVGSG
Trigger: GCCACTTCCAACTGAAGCTCAGTGACCTGGGTGGGC...CCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATGTTCCCAACCAGCTCTaGTGTGGCGGTGGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDVPNQL*CGGGVR
Trigger: CCTCACGCCACCGCCACATCAGAGCTGGTTGGGAAC...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCTGTAACTCTAAAGGCTaGTTCTACCCCTTAAAGGGA +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSACNSKG*FYPLKG
Trigger: TCCCTTTAAGGGGTAGAATCAGCCTTTAGAGTTACA...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTTCAAACACTTCTGTGTaGGAGGGAAAAGGGACGAAG +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPASNTSV*EGKGTK
Trigger: CTTCGTCCCTTTTCCCTCTCACACAGAAGTGTTTGA...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CCTCACCTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTTCAAACACTTCTGTGTaGGAGGGAAAAGGGACGAAG +
Preference number: 4 (lower is better)
Translates to: PHLLQSGGYSCSPGDRSLSNTSV*EGKGTK
Trigger: CTTCGTCCCTTTTCCCTCTCACACAGAAGTGTTTGA...AAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGAAGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTTGCCCTCTTTTAGCCGGACTGAGGGTAGCTaGGATGGCACATTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RRRNSCQVRSLTALPSFSRTEGS*DGTFSF
Trigger: GAAGGAGAATGTGCCATCTCAGCTACCCTCAGTCCG...GCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTAGGATAGGAAAGTTCTaGGATGAAGACAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATRIGKF*DEDNLA
Trigger: TGCCAGGTTGTCTTCATCTCAGAACTTTCCTATCCT...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCACACAACATGCAGATaGGCTCTACACCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWHTTCR*ALHQPR
Trigger: TCTCGGCTGGTGTAGAGCTCATCTGCATGTTGTGTG...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCCTCTCTGTGTGGAGAGAGGGCGGGAAGGAGACCTCTAGTTGACTGCATAACCTCTCTCCTAAGAGGCTaGGCTGATTCATACCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSLCGERAGRRPLVDCITSLLRG*ADSYPA
Trigger: TGCAGGGTATGAATCAGCTCAGCCTCTTAGGAGAGA...GGTTATGCAGTCAACTAGAGGTCTCCTTCCCGCCCTCTCTCCACACAGAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAATCTAATAAAGCTTTaGATGGGCCTGGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGNLIKL*MGLEAP
Trigger: GGGAGCCTCCAGGCCCATTCAAAGCTTTATTAGATT...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGGTCTCTTCATCCAAATaGAGTTTGTCCCAAGAACTT +
Preference number: 4 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWVSSSK*SLSQEL
Trigger: AAGTTCTTGGGACAAACTTCATTTGGATGAAGAGAC...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323630.9
CDS-3UTR TCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGAGACAAACAGTTCTaGTCCAGATTGCTTTCCGAG +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASRDKQF*SRLLSE
Trigger: CTCGGAAAGCAATCTGGATCAGAACTGTTTGTCTCG...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS-3UTR GCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTAGCAGGTGGTCGGATTaGGTTGTTCAGTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPSRWSD*VVQSLQ
Trigger: CTGAAGAGACTGAACAACGCAATCCGACCACCTGCT...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTTGGCATAGACCTCCATaGACCAAGCATGGTATGCAA +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPAWHRPP*TKHGMQ
Trigger: TTGCATACCATGCTTGGTGCATGGAGGTCTATGCCA...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGATGGCATAGACCTCCATaGACCAAGCATGGTATGCAA +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGWHRPP*TKHGMQ
Trigger: TTGCATACCATGCTTGGTGCATGGAGGTCTATGCCA...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACGTGCTCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCAGCTGCATAGGAGCGTaGATCCAAGATCAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: TCSDALGFAWTESTREAFSCIGA*IQDQKL
Trigger: AAGCTTTTGATCTTGGATGCACGCTCCTATGCAGCT...GAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGAGATGGAGCCATTTTGTaGTTTCAAGAGCTGATAGCC +
Preference number: 4 (lower is better)
Translates to: SRSQISILLALTTILPPGDGAIL*FQELIA
Trigger: GGCTATCAGCTCTTGAAAGCACAAAATGGCTCCATC...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGATCTCCTTGGCGTTGTTaGACAGGAATGTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: SRSQISILLALTTILPPGSPWRC*TGMFQT
Trigger: TGTTTGGAACATTCCTGTGCAACAACGCCAAGGAGA...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAATGGGGCTGGGTATGGTaGACAGCTGTCGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQWGWVW*TAVVHR
Trigger: CCTGTGGACGACAGCTGTGCACCATACCCAGCCCCA...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGATCATCAGGGCTGGTaGCTGGGGCTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSDHQGW*LGLGMV
Trigger: CACCATACCCAGCCCCAGGCACCAGCCCTGATGATC...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCTCTTTGGTGGCCTCCTaGAAGATGTTCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCSLVAS*KMFSIC
Trigger: GCAGATGGAGAACATCTTGCAGGAGGCCACCAAAGA...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCTCTGCTGTTCAGAAATaGCCTGTGAGAACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCSAVQK*PVRTEA
Trigger: GGCCTCTGTTCTCACAGGGCATTTCTGAACAGCAGA...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGTCTTCTATTCGAAACTaGTCCACAGGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DTPCPWSGNCYQGEEEYRSSIRN*STGTSR
Trigger: CCTGGAGGTCCCTGTGGAGCAGTTTCGAATAGAAGA...CCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCTTCCTCCCTACCCTCTaGAATCTCTTCTATTCGAAA +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCFLPTL*NLFYSK
Trigger: TTTCGAATAGAAGAGATTGCAGAGGGTAGGGAGGAA...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTTGCAGCCACTTGTGGTaGAAGTTCCTTGAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPACSHLW*KFLECK
Trigger: CTTACACTCAAGGAACTTGCACCACAAGTGGCTGCA...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTCTTCCTGAGTGGCTATaGAGCCACTTGTGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASLPEWL*SHLWCK
Trigger: CTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAG...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGTTGTGGGATGTAGGCTaGTATAGCAAGACTTGCATA +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLLWDVG*YSKTCI
Trigger: TATGCAAGTCTTGCTATAGCAGCCTACATCCCACAA...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCCAGTTCAAGGTCAATaGTGGAGCTTGTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNPVQGQ*WSLWDV
Trigger: TACATCCCACAAGCTCCAGCATTGACCTTGAACTGG...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATCAGCAGCTTGGCCACTaGCCACCCAGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDQQLGH*PPRSLS
Trigger: GCTCAGTGACCTGGGTGGGCAGTGGCCAAGCTGCTG...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGACAACCTGGCAGCTCAAAGTCACAGTTCATGCCCTGTTGCTTCAGACCAAATGCTCCCATTCCAAAGTaGACGGGCCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RQPGSSKSQFMPCCFRPNAPIPK*TGLSVC
Trigger: GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGC...ATTTGGTCTGAAGCAACAGGGCATGAACTGTGACTTTGAGCTGCCAGGTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGACTGGCTTTCTTCCCTaGTCACGGTCTCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWTGFLP*SRSQIS
Trigger: GGAGATCTGAGACCGTGAGCAGGGAAGAAAGCCAGT...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTGAGGTCCCAGCCCCTCGCCTaGCTCAAAGGAGCATCCACT +
Preference number: 4 (lower is better)
Translates to: IYRVPLPPNISLIYPSVRSQPLA*LKGAST
Trigger: AGTGGATGCTCCTTTGAGGCAGGCGAGGGGCTGGGA...CCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGGTGGCAAAGGGGGACTaGTCAGCAGTTATTCCTGTC +
Preference number: 4 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWVAKGD*SAVIPV
Trigger: GACAGGAATAACTGCTGAGCAGTCCCCCTTTGCCAC...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCTTGGTCAGGGAACTaGTACCAAGGGGAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWPWSGN*YQGEEE
Trigger: TTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGG...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAACGTTCAAACTGTGTTaGCACTGGAAGTCAGAGACG +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGTFKLC*HWKSET
Trigger: CGTCTCTGACTTCCAGTGGCAACACAGTTTGAACGT...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCATCTCCCAGCCTCATGTaGAAGCAGGCAAGTATATCA +
Preference number: 4 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTASPSLM*KQASIS
Trigger: TGATATACTTGCCTGCTTGCACATGAGGCTGGGAGA...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CCTCACCTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTGAGGCTACTGGTATCTaGACACAACATGCAGATGAG +
Preference number: 4 (lower is better)
Translates to: PHLLQSGGYSCSPGDRSLEATGI*TQHADE
Trigger: CTCATCTGCATGTTGTGTGCAGATACCAGTAGCCTC...AAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCAGAAAATCTCTGTGCTaGAGCGAGACAAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSARKSLC*SETNSS
Trigger: AGAACTGTTTGTCTCGCTGCAGCACAGAGATTTTCT...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS-3UTR CCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTTCCATGCACCAAGCATaGTATGCAAATGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSSMHQA*YANEKR
Trigger: TCTCTTCTCATTTGCATACCATGCTTGGTGCATGGA...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTGTTGCTCTTTTTCACTaGCATAGACCTCCATGCACC +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPAVALFH*HRPPCT
Trigger: GGTGCATGGAGGTCTATGCCAGTGAAAAAGAGCAAC...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACGTTGCTCTTTTTCACTaGCATAGACCTCCATGCACC +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNVALFH*HRPPCT
Trigger: GGTGCATGGAGGTCTATGCCAGTGAAAAAGAGCAAC...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCCAGAGGCACAAGCTTTaGCTACTGACTGTACCAGAT +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLQRHKL*LLTVPD
Trigger: ATCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTG...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAAAGGTCTCCCCCATTaGGAAAGTCTCGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGKGLPH*ESLEKC
Trigger: ACACTTCTCGAGACTTTCCCAATGGGGGAGACCTTT...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCCTGGAAACCCTCTATaGTTCGGTAATAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPAPGNPL*FGNKGP
Trigger: TGGACCCTTATTACCGAACCATAGAGGGTTTCCAGG...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCCCTGGAAACCCTCTATaGTTCGGTAATAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLPGNPL*FGNKGP
Trigger: TGGACCCTTATTACCGAACCATAGAGGGTTTCCAGG...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGTTTCCCCTCTCTCCTTaGCGTTGTTGCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMFPLSP*RCCTGM
Trigger: CATTCCTGTGCAACAACGCCAAGGAGAGAGGGGAAA...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCGCCTGGGGCTGGGTATaGTGCACAGCTGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFAWGWV*CTAVVH
Trigger: GTGGACGACAGCTGTGCACCATACCCAGCCCCAGGC...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTGTTGTCACAGGCTGTaGTCAGATTGTCGTATGATC +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSCCHRL*SDCRMI
Trigger: GATCATACGACAATCTGACCACAGCCTGTGACAACA...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTCACTCTCCTCTTTGGTaGCCTCCTGCAAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVHSPLW*PPARCS
Trigger: AGAACATCTTGCAGGAGGCCACCAAAGAGGAGAGTG...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGCACTCTCCTCTTTGGTaGCCTCCTGCAAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKHSPLW*PPARCS
Trigger: AGAACATCTTGCAGGAGGCCACCAAAGAGGAGAGTG...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCAAGCATCACCCAGTTCTaGGTCTTGGTGAAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTASITQF*VLVKSN
Trigger: ATTGGACTTCACCAAGACCCAGAACTGGGTGATGCT...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTTGCATCTACTGGGATTaGAAGAACTGCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASCIYWD*KNCFLP
Trigger: AGGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCA...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAACTTTTGCATCTACTaGGATTGGAAGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPNFCIY*DWKNCF
Trigger: GAAGCAGTTCTTCCAATCCCAGTAGATGCAAAAGTT...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGTTGTCTCTGAAGGGCTaGGTTCCATGGTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMLSLKG*VPWSEE
Trigger: TTCCTCAGACCATGGAACCCAGCCCTTCAGAGACAA...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGACTATGCAGCCACTTGTaGTGCAAGTTCCTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGLCSHL*CKFLEC
Trigger: ACACTCAAGGAACTTGCACCACAAGTGGCTGCATAG...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTACAGTGGGCGGCCAGGTaGTCAGGAAGCCAACGGGTC +
Preference number: 4 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLQWAAR*SGSQRV
Trigger: GACCCGTTGGCTTCCTGACCACCTGGCCGCCCACTG...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAGTGGTGCTTCCTGCTaGCAAGCCAGAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSSGASC*QARRHC
Trigger: ACAGTGCCTTCTGGCTTGCCAGCAGGAAGCACCACT...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCAGGAACTGGAACCTTCTaGTTACAACAACTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTAGTGTF*LQQLEQ
Trigger: CTGCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCC...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGCTGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTTGAGGCGAGAGGTACAAAGAGCTGCTGGCTaGGAACTGGAACCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GCPEIRAAAKNGALRREVQRAAG*ELEPSG
Trigger: ACCAGAAGGTTCCAGTTCCCAGCCAGCAGCTCTTTG...TACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATATAGGAACAGCAGCTTaGCCACTGCCCACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHIGTAA*PLPTQV
Trigger: GACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTAT...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCCGGTGGCGTGAGGAATaGTTGCATGTTAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSRWREE*LHVSTG
Trigger: GCCAGTGCTAACATGCAACCATTCCTCACGCCACCG...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCGAGCCCAAGACAATCTaGGTCAAGTTAAAAATGGGA +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSAEPKTI*VKLKMG
Trigger: TCCCATTTTTAACTTGACCCAGATTGTCTTGGGCTC...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGATGGATTTCCCTGTGCTaGCTGAGGAAGAGATTGTTT +
Preference number: 4 (lower is better)
Translates to: SRSQISILLALTTILPPGWISLC*LRKRLF
Trigger: AAACAATCTCTTCCTCAGCCAGCACAGGGAAATCCA...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTGAACTGGGAACGGGGGATTTCTaGAACCCTGAGTCTGGATTT +
Preference number: 4 (lower is better)
Translates to: LLQSGGYSCSPGDRSLELGTGDF*NPESGF
Trigger: AAATCCAGACTCAGGGTTCCAGAAATCCCCCGTTCC...CAGTTCAAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTGGGAAGATCCATGATTaGTTTGGTTTGGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVGKIHD*FGLGTG
Trigger: CCCCGTTCCCAAACCAAACCAATCATGGATCTTCCC...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTGAGGCAGCAGAGTCAAGCATaGCCTCCCCAAGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: IYRVPLPPNISLIYPSVRQQSQA*PPQEGG
Trigger: CCCTCCCTCTTGGGGAGGCCATGCTTGACTCTGCTG...CCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCGTATCATAACCTCTTaGCACCTGTCACTAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCRIITS*HLSLGN
Trigger: ATTTCCTAGTGACAGGTGCCAAGAGGTTATGATACG...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGCTGAGCAGGTCACTCTaGATCTTAGCCAACTCACCA +
Preference number: 4 (lower is better)
Translates to: DTPCPWSGNCYQGEEEYRLSRSL*ILANSP
Trigger: TGGTGAGTTGGCTAAGATCCAGAGTGACCTGCTCAG...CCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCCATGAACCCTGCCTCTaGAAGATAAATAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: SALGEYASSLPSSKGFPTHEPCL*KINSDP
Trigger: GGGGTCACTATTTATCTTCCAGAGGCAGGGTTCATG...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 72 bp ATGCACAGAACCACCTTCCTGAGACACACCTTGCCCTaGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATA +
Preference number: 4 (lower is better)
Translates to: MHRTTFLRHTLP*VRELLPRGRGI
Trigger: TATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGTTCTGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGGAGTCTCTTCATCCATaGCAAGAGGCCCAGATTAGG +
Preference number: 4 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWESLHP*QEAQIR
Trigger: CCTAATCTGGGCCTCTTGTCATGGATGAAGAGACTC...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGTCAAGGAAAGGAACCTaGAGATTCTCATCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWSRKGT*RFSSSR
Trigger: CCGGGAGGATGAGAATCTTCAGGTTCCTTTCCTTGA...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCTGCGCTTCCAGGACCTaGAACTTGATACACTTTCCA +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCCASRT*NLIHFP
Trigger: TGGAAAGTGTATCAAGTTTCAGGTCCTGGAAGCGCA...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTGAGGGTCCACAGCGGGCAATaGCAGCTCCATTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: IYRVPLPPNISLIYPSVRVHSGQ*QLHCSG
Trigger: ACCAGAGCAATGGAGCTGTCATTGCCCGCTGTGGAC...CCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAAAGCAAGAAGCACAGACAAGTaGTGGAGCCATTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SVLMPEGGKCYTAWPRKARSTDK*WSHFVL
Trigger: AAGCACAAAATGGCTCCATCACTTGTCTGTGCTTCT...TGCTTTCCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCAAGGAATGCTTCATTaGACTCAAAAGAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSQGMLH*TQKSKE
Trigger: TTCCTTGCTCTTTTGAGTTCAATGAAGCATTCCTTG...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGAACATGTCCGTTCCTaGGTATGCTTTTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: ETHLALGQGTATKGKRNTEHVRS*VCFSPL
Trigger: GAGAGGGGAAAAGCATACTCAGGAACGGACATGTTC...TGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATGCCTGCCCGAAGAAGTaGCCACACGGAACATGTCCG +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDACPKK*PHGTCP
Trigger: CGGACATGTTCCGTGTGGTCACTTCTTCGGGCAGGC...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCAGTGAAGTCCAATGGCTaGGGCCTCAGGTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSVKSNG*GLRCLP
Trigger: AGGAAGACACCTGAGGCCTCAGCCATTGGACTTCAC...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGTTGGGGCCCACTTACTaGCTTCACCTTATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWLGPTY*LHLIFH
Trigger: GTGGAAGATAAGGTGAAGTCAGTAAGTGGGCCCCAA...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTTTGGGGCCCACTTACTaGCTTCACCTTATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASLGPTY*LHLIFH
Trigger: GTGGAAGATAAGGTGAAGTCAGTAAGTGGGCCCCAA...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGCAGATGGCCTTCCTaGGTGGCTATGCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: GCHLPCASPSKHQPHLSICRWPS*VAMQPL
Trigger: AAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCA...GATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGCGTGTCTGTGTACACTaGCATGCCATCATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKRVCVH*HAIIVQ
Trigger: CTGGACGATGATGGCATGTCAGTGTACACAGACACG...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTTGGCCTGACTCAATCTaGCGCAGGCGCTGTTGGATC +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSWPDSI*RRRCWI
Trigger: GATCCAACAGCGCCTGCGTCAGATTGAGTCAGGCCA...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCACAATTCCACGTTTaGTCAACACGGTCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWPQFHV*STRSVS
Trigger: GGACACTGACCGTGTTGATCAAACGTGGAATTGTGG...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333027.7
CDS-3UTR GCA 90 bp CTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTGAACTGGGCCCACAAACTCTGTaGTCTCTCCATGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LLQSGGYSCSPGDRSLELGPQTL*SLHEVQ
Trigger: TTGAACTTCATGGAGAGAGCACAGAGTTTGTGGGCC...CAGTTCAAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTGGCCCACAAACTCTGTaGTCTCTCCATGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPGPQTL*SLHEVQ
Trigger: TTGAACTTCATGGAGAGAGCACAGAGTTTGTGGGCC...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTGCATAGGAGCGTaGATCCAAGATCAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SALGEYASSLPSSKGFPTSCIGA*IQDQKL
Trigger: AAGCTTTTGATCTTGGATGCACGCTCCTATGCAGCT...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCTCCTTTGGCTCGGTTTaGCACAGCAGCTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSSFGSV*HSSCIG
Trigger: TCCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGA...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGAATAGAATGAATGTTTaGCATCCCCATAAACACAAC +
Preference number: 4 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGNRMNV*HPHKHN
Trigger: GTTGTGTTTATGGGGATGGCAAACATTCATTCTATT...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAGATCTGGCATCTGAGTaGACAGCAACCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPDLASE*TATAET
Trigger: AGTCTCTGCGGTTGCTGTGCACTCAGATGCCAGATC...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCAGATGGAGCCATTTTGTaGTTTCAAGAGCTGATAGCC +
Preference number: 4 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTADGAIL*FQELIA
Trigger: GGCTATCAGCTCTTGAAAGCACAAAATGGCTCCATC...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTCTCCTTGGCGTTGTTaGACAGGAATGTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLSPWRC*TGMFQT
Trigger: TGTTTGGAACATTCCTGTGCAACAACGCCAAGGAGA...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATTGGGGCTGGGTATGGTaGACAGCTGTCGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDWGWVW*TAVVHR
Trigger: CCTGTGGACGACAGCTGTGCACCATACCCAGCCCCA...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGCAGGTGTCTTCCTCCTaGTCTCCTTTTCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKQVSSS*SPFLRE
Trigger: CTCTCTTAGAAAAGGAGAGCAGGAGGAAGACACCTG...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTTCCTCCCTACCCTCTaGAATCTCTTCTATTCGAAA +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSFLPTL*NLFYSK
Trigger: TTTCGAATAGAAGAGATTGCAGAGGGTAGGGAGGAA...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCCAAGGGAAGTCCTATaGACCACAGACCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHPREVL*TTDPTW
Trigger: CCAAGTGGGGTCTGTGGTGCATAGGACTTCCCTTGG...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGTGCAGCCACTTGTGGTaGAAGTTCCTTGAGTGTAAG +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMCSHLW*KFLECK
Trigger: CTTACACTCAAGGAACTTGCACCACAAGTGGCTGCA...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAAAGTTTCTACTTCCTaGTGGTGGCCTGACTCAATC +
Preference number: 4 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGKVSTS*WWPDSI
Trigger: GATTGAGTCAGGCCACCAGCAGGAAGTAGAAACTTT...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACGTGCTCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTTGTGGGATGTAGGCTaGTATAGCAAGACTTGCATA +
Preference number: 4 (lower is better)
Translates to: TCSDALGFAWTESTREAFLWDVG*YSKTCI
Trigger: TATGCAAGTCTTGCTATAGCAGCCTACATCCCACAA...GAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATTGCTCTTGGGGAATATaGTTCCAGCCTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHCSWGI*FQPPQQ
Trigger: CTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCA...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCAGGCGCCTAAGGGGATaGCATTTACCGTGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIRRLRG*HLPCAS
Trigger: AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCT...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTGGCACAAAACATGGATaGCAAGATTACAAAGCACAA +
Preference number: 4 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGGTKHG*QDYKAQ
Trigger: TTGTGCTTTGTAATCTTGGCATCCATGTTTTGTGCC...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTAGACCTCTAGTTGACTaGATAACCCAATCACATCTA +
Preference number: 4 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSRPLVD*ITQSHL
Trigger: TAGATGTGATTGGGTTATGCAGTCAACTAGAGGTCT...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGGCCAGTGTTTTAATTTaGTGGAGACTAGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKASVLI*WRLAHR
Trigger: CCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGC...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGAACAGCTGGGACTCCTaGCACATTATCCAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKNSWDS*HIIQKS
Trigger: GGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTT...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAACAGCTGGGACTCCTaGCACATTATCCAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVNSWDS*HIIQKS
Trigger: GGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTT...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGAGTTCTGATCCAGATTaGTTTCCGAGTCGGGGATTG +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMSSDPD*FPSRGL
Trigger: CAATCCCCGACTCGGAAAGCAATCTGGATCAGAACT...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS-3UTR CCA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGATTCTATTTTAGCAGGTaGTCGGATTGCGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SRSQISILLALTTILPPGFYFSR*SDCVVQ
Trigger: CTGAACAACGCAATCCGACCACCTGCTAAAATAGAA...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTTTCTATTTTAGCAGGTaGTCGGATTGCGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATFYFSR*SDCVVQ
Trigger: CTGAACAACGCAATCCGACCACCTGCTAAAATAGAA...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCAAAAAGCTTCTGCGGTTaGATGGCTAAACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTAKSFCG*MAKLSA
Trigger: AGCAGAGAGTTTAGCCATCCAACCGCAGAAGCTTTT...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTGCCTGGGGCTGGGTATaGTGCACAGCTGTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGAWGWV*CTAVVH
Trigger: GTGGACGACAGCTGTGCACCATACCCAGCCCCAGGC...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGGCAGTGTTGTCACAGGCTGTaGTCAGATTGTCGTATGATC +
Preference number: 4 (lower is better)
Translates to: HLALGQGTATKGKRNTGQCCHRL*SDCRMI
Trigger: GATCATACGACAATCTGACCACAGCCTGTGACAACA...CTGCCCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCCTCCACTCTCCTCTTTaGTGGCCTCCTGCAAGATGT +
Preference number: 4 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLLHSPL*WPPARC
Trigger: ACATCTTGCAGGAGGCCACCAAAGAGGAGAGTGGAG...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGAGCATCACCCAGTTCTaGGTCTTGGTGAAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: DTPCPWSGNCYQGEEEYRSITQF*VLVKSN
Trigger: ATTGGACTTCACCAAGACCCAGAACTGGGTGATGCT...CCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTTGCATCTACTGGGATTaGAAGAACTGCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPCIYWD*KNCFLP
Trigger: AGGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCA...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAAAGCAGTCTCAAAAGGGACTTaGGAAGGTAGCAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: SVLMPEGGKCYTAWPRKAVSKGT*EGSREH
Trigger: ATGTTCTCTGCTACCTTCCCAAGTCCCTTTTGAGAC...TGCTTTCCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGTCTCAAAAGGGACTTaGGAAGGTAGCAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLVSKGT*EGSREH
Trigger: ATGTTCTCTGCTACCTTCCCAAGTCCCTTTTGAGAC...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGGTGTGGGGTACATCTaGAGGGTGCTAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSGVGYI*RVLRPG
Trigger: CCCAGGTCTTAGCACCCTCCAGATGTACCCCACACC...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGACAACCTGGCAGCTCAAAGTCACAGTTCATGCCCTGTTGCTTCAGACCAAATGGTGTGGGGTACATCTaGAGGGTGCTAAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: RQPGSSKSQFMPCCFRPNGVGYI*RVLRPG
Trigger: CCCAGGTCTTAGCACCCTCCAGATGTACCCCACACC...ATTTGGTCTGAAGCAACAGGGCATGAACTGTGACTTTGAGCTGCCAGGTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCAATGCCCATTGGGTGTaGGGTACATCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GCHLPCASPSKHQPHLSINAHWV*GTSGGC
Trigger: GCACCCTCCAGATGTACCCCACACCCAATGGGCATT...GATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCTGGCGCAATGCCCATTaGGTGTGGGGTACATCTGGA +
Preference number: 4 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIWRNAH*VWGTSG
Trigger: TCCAGATGTACCCCACACCCAATGGGCATTGCGCCA...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCGATGGCCTTCCTGAGTaGCTATGCAGCCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIDGLPE*LCSHLW
Trigger: CCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATC...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCCGACTCTTCAGCTCCTaGACTTGTTTCTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSRLFSS*TCFFKV
Trigger: AACTTTGAAGAAACAAGTCCAGGAGCTGAAGAGTCG...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACCAAGTGGCCCTTCACTGCTGCTGGCTGGGAACTaGAACCTTCTGGTTACAACA +
Preference number: 4 (lower is better)
Translates to: GHVTSLRNPTKSPSGPSLLLAGN*NLLVTT
Trigger: TGTTGTAACCAGAAGGTTCCAGTTCCCAGCCAGCAG...CAGTGAAGGGCCACTTGGTGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACATCACTGAGCTTCAGTTaGAAGTGGCAGCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: ETHLALGQGTATKGKRNTSLSFS*KWQQWA
Trigger: AGCCCATTGCTGCCACTTCCAACTGAAGCTCAGTGA...TGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCCAATCTACAATCCAGTaGTGCATCCCAAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSQSTIQ*CIPNLS
Trigger: TGACAGATTTGGGATGCACCACTGGATTGTAGATTG...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCACAGTTACAGTGGGCCTaGCAACCCTTGGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPQLQWA*QPLVFH
Trigger: ATGGAAGACCAAGGGTTGCCAGGCCCACTGTAACTG...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACTTCATAGCTCGGCAGTTACAGTaGGCCTGGCAACCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LCVDTMAMAHTHGFHNFIARQLQ*AWQPLV
Trigger: GACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGC...TATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTCAGACAGCCAGGAGTaGCAAAGGGGGACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLSDSQE*QRGTAQ
Trigger: CTGAGCAGTCCCCCTTTGCCACTCCTGGCTGTCTGA...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATTACGAAGTCACCAAGTaGCCCTTCACTGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHYEVTK*PFTAGQ
Trigger: CTGGCCAGCAGTGAAGGGCCACTTGGTGACTTCGTA...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCGCAAATGCTACCATGTaGAACACTCAACTTTATTTG +
Preference number: 4 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPANATM*NTQLYL
Trigger: CAAATAAAGTTGAGTGTTCCACATGGTAGCATTTGC...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCATGGCACACACTCATaGTTTTCACAACTTCATATG +
Preference number: 4 (lower is better)
Translates to: CTGGSTLPFQSARASRSAHGTHS*FSQLHM
Trigger: CATATGAAGTTGTGAAAACCATGAGTGTGTGCCATG...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAAAGCAGAGATGAAGACAACCTaGCAGCTCAAAGTCACAGTT +
Preference number: 4 (lower is better)
Translates to: SVLMPEGGKCYTAWPRKAEMKTT*QLKVTV
Trigger: AACTGTGACTTTGAGCTGCCAGGTTGTCTTCATCTC...TGCTTTCCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCATCCAAAAGTCCAAATaGATAGTCACTTTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCIQKSK*IVTLLH
Trigger: GTGGAGCAAAGTGACTATCCATTTGGACTTTTGGAT...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAAAATTGGAAAGGGCAATaGTGGCATCCTCGGCACGGC +
Preference number: 4 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQNWKGQ*WHPRHG
Trigger: GCCGTGCCGAGGATGCCATCATTGCCCTTTCCAATT...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTCTCTTCAGCCACTCTTaGCACTGCTCAAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASLFSHS*HCSKVE
Trigger: TTCAACCTTTGAGCAGTGTCAAGAGTGGCTGAAGAG...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATTCCAGGCAGGCACTATaGGCTCTTGAGGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHSRQAL*ALEDSY
Trigger: GTAGCTATCCTCAAGAGCTCATAGTGCCTGCCTGGA...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCCAGGACCTGAAACTTaGTACACTTTCCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSLCTGGSTLPFQSARASPGPET*YTFQFF
Trigger: AAAGAACTGGAAAGTGTATCAAGTTTCAGGTCCTGG...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGGCCTGCCCGAAGAAGTaGCCACACGGAACATGTCCG +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWACPKK*PHGTCP
Trigger: CGGACATGTTCCGTGTGGTCACTTCTTCGGGCAGGC...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCAATACAGTAGGTTTTTaGAAGCCTTGTTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCNTVGF*KPCCLP
Trigger: GGGCAGGCAACAAGGCTTTCAAAAACCTACTGTATT...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGGTGAAGTCCAATGGCTaGGGCCTCAGGTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLVKSNG*GLRCLP
Trigger: AGGAAGACACCTGAGGCCTCAGCCATTGGACTTCAC...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCTTGGGGCCCACTTACTaGCTTCACCTTATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLLGPTY*LHLIFH
Trigger: GTGGAAGATAAGGTGAAGTCAGTAAGTGGGCCCCAA...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCAGCTGACGGCTCAGTaGGTCCTTGCTCCTACCAGC +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWQLTAQ*VLAPTS
Trigger: GCTGGTAGGAGCAAGGACTCACTGAGCCGTCAGCTG...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTCTCATAGCAGACAGCTaGCGGCTCAGTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSLIADS*RLSESL
Trigger: CAAGGACTCACTGAGCCGTCAGCTGTCTGCTATGAG...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGGCCCACCCAGGTCACTaGGCTTCAGTTGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWAHPGH*ASVGSG
Trigger: GCCACTTCCAACTGAAGCTCAGTGACCTGGGTGGGC...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGACCTGCACGACTAGATaGCACAGAATGTGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKTCTTR*HRMWKR
Trigger: TCTTTTCCACATTCTGTGTCATCTAGTCGTGCAGGT...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTAGTTGTAATGACTACTaGTGGGAACTCTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SRSAQVEWACHRNSSLATSCNDY*WELFRE
Trigger: TTCTCTGAAGAGTTCCCATCAGTAGTCATTACAACT...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGAGGATAGGAAAGTTCTaGGATGAAGACAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKRIGKF*DEDNLA
Trigger: TGCCAGGTTGTCTTCATCTCAGAACTTTCCTATCCT...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAATCTGATTGGCCTGGATaGACTCAAGGCTGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQSDWPG*TQGCAE
Trigger: CTCGGCACAGCCTTGAGTGCATCCAGGCCAATCAGA...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAAACCTTGAAGTTACATaGTCCCCTGGTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPNLEVT*SPGLHR
Trigger: CCTGTGCAGACCAGGGGAGCATGTAACTTCAAGGTT...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTACTGACTGTACCAGATaGTCATCATCTGCATTTCGC +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPTDCTR*SSSAFR
Trigger: GCGAAATGCAGATGATGAGCATCTGGTACAGTCAGT...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAAAGCAAAGATCAAAAGCTTCTaGGGTTGGATGGCTAAACTC +
Preference number: 4 (lower is better)
Translates to: SVLMPEGGKCYTAWPRKAKIKSF*GWMAKL
Trigger: GAGTTTAGCCATCCAACCGCAGAAGCTTTTGATCTT...TGCTTTCCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGAGCTGCATAGGAGCGTaGATCCAAGATCAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMSCIGA*IQDQKL
Trigger: AAGCTTTTGATCTTGGATGCACGCTCCTATGCAGCT...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCTCCTTTGGCTCGGTTTaGCACAGCAGCTGCATAGGA +
Preference number: 4 (lower is better)
Translates to: KGMPFTVCLSLQTSASFISFGSV*HSSCIG
Trigger: TCCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGA...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTAATAGAATGAATGTTTaGCATCCCCATAAACACAAC +
Preference number: 4 (lower is better)
Translates to: GGSTLPFQSARASRSAQVNRMNV*HPHKHN
Trigger: GTTGTGTTTATGGGGATGGCAAACATTCATTCTATT...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCCAGTTTCACAAGGAATaGTTCATTGAACTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTQFHKE*FIELKR
Trigger: TCTTTTGAGTTCAATGAAGCATTCCTTGTGAAACTG...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCCAGTTTCACAAGGAATaGTTCATTGAACTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPQFHKE*FIELKR
Trigger: TCTTTTGAGTTCAATGAAGCATTCCTTGTGAAACTG...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTGGGGCTGGGTATGGTaGACAGCTGTCGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGWGWVW*TAVVHR
Trigger: CCTGTGGACGACAGCTGTGCACCATACCCAGCCCCA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTGATCATCAGGGCTGGTaGCTGGGGCTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGDHQGW*LGLGMV
Trigger: CACCATACCCAGCCCCAGGCACCAGCCCTGATGATC...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCAGGTGTCTTCCTCCTaGTCTCCTTTTCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWQVSSS*SPFLRE
Trigger: CTCTCTTAGAAAAGGAGAGCAGGAGGAAGACACCTG...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTAAGGCTGGTCGGGGCTaGTGGTTGCAGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGKAGRG*WLQMAF
Trigger: GAAGGCCATCTGCAACCAGCAGCCCCGACCAGCCTT...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTCACGGTCAGTGTCCCTaGAGTGGTGCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGHGQCP*SGASCW
Trigger: CCAGCAGGAAGCACCACTGCAGGGACACTGACCGTG...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACTGCTATAGCAAGACTTaGATACTCGACTGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNCYSKT*ILDWVQ
Trigger: TTGAACCCAGTCGAGTATGCAAGTCTTGCTATAGCA...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTTCTACAATCCAGTGGTaGATCCCAAATCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPSTIQW*IPNLSL
Trigger: GAGTGACAGATTTGGGATGCACCACTGGATTGTAGA...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTTGCTCTTGGGGAATATaGTTCCAGCCTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSCSWGI*FQPPQQ
Trigger: CTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCA...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCACCAGTCTGTACTCATaGCTGAGGGTGGGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: KGMPFTVCLSLQTSASFITSLYS*LRVGSA
Trigger: AGCACTTCCCACCCTCAGGCATGAGTACAGACTGGT...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCATGGTGAGGCTCCTTaGCAAGGTCTAGAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHHGEAP*QGLESE
Trigger: TTCCGACTCTAGACCTTGGCAAGGAGCCTCACCATG...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAAGCCTTGGATCCTCACTaGACCTGCTTCACCAGCATC +
Preference number: 4 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQALDPH*TCFTSI
Trigger: GATGCTGGTGAAGCAGGTGCAGTGAGGATCCAAGGC...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTCAGGGCAATTCCTTaGCTTGGATCCTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHLRAIP*LGSSLH
Trigger: GTGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGAG...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATCTGCCTTTCTCCATATaGAGCCACCTCCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDLPFSI*SHLPQG
Trigger: GCCCTGAGGGAGGTGGCTGCATATGGAGAAAGGCAG...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGCTGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTTGAGGCGAGAGGTAAGTTCTGATCCAGATTaGTTTCCGAGTCGGGGATTG +
Preference number: 4 (lower is better)
Translates to: GCPEIRAAAKNGALRREVSSDPD*FPSRGL
Trigger: CAATCCCCGACTCGGAAAGCAATCTGGATCAGAACT...TACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401950.7
CDS-3UTR GCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCATCCTGTTTATCCACCTaGTCCCAGCTGGCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSSCLST*SQLASE
Trigger: CTCTGAAGCCAGCTGGGAGCAGGTGGATAAACAGGA...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS-3UTR GCA 90 bp AGACAACCTGGCAGCTCAAAGTCACAGTTCATGCCCTGTTGCTTCAGACCAAATCGTTCCCACAATTCCTaGAGTGGTGCTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RQPGSSKSQFMPCCFRPNRSHNS*SGASCW
Trigger: CCAGCAGGAAGCACCACTGCAGGAATTGTGGGAACG...ATTTGGTCTGAAGCAACAGGGCATGAACTGTGACTTTGAGCTGCCAGGTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401950.7
CDS-3UTR CCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAGGATCAGCTGCTTCCTaGGAAAGATCTGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPGSAAS*ERSDWP
Trigger: AGGCCAATCAGATCTTTCCCAGGAAGCAGCTGATCC...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCTTCTATTTTAGCAGGTaGTCGGATTGCGTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SALGEYASSLPSSKGFPTFYFSR*SDCVVQ
Trigger: CTGAACAACGCAATCCGACCACCTGCTAAAATAGAA...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTCCATGCACCAAGCATaGTATGCAAATGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLSMHQA*YANEKR
Trigger: TCTCTTCTCATTTGCATACCATGCTTGGTGCATGGA...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGAAAAGCTTCTGCGGTTaGATGGCTAAACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMKSFCG*MAKLSA
Trigger: AGCAGAGAGTTTAGCCATCCAACCGCAGAAGCTTTT...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCACAACTTCACAGTTTaGGTAATACTCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: LLGNMLPASPAAKGSQPAHNFTV*VILWAF
Trigger: GAATGCCCAGAGTATTACCCAAACTGTGAAGTTGTG...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCCAATGCCACAATCTaGGGGGTGCGGTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVANATI*GVRSQP
Trigger: TGGCTGGGACCGCACCCCCCAGATTGTGGCATTGGC...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AGAAGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTTGCCCTCTTTTAGCTTTCCCCTCTCTCCTTaGCGTTGTTGCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: RRRNSCQVRSLTALPSFSFPLSP*RCCTGM
Trigger: CATTCCTGTGCAACAACGCCAAGGAGAGAGGGGAAA...GCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTAATCAGGGCTGGTGCCTaGGGCTGGGTATGGTGCACA +
Preference number: 4 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLIRAGA*GWVWCT
Trigger: TGTGCACCATACCCAGCCCCAGGCACCAGCCCTGAT...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTATCAGGGCTGGTGCCTaGGGCTGGGTATGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWAIRAGA*GWVWCT
Trigger: TGTGCACCATACCCAGCCCCAGGCACCAGCCCTGAT...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ACGTGCTCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCAACTTTTGCATCTACTaGGATTGGAAGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: TCSDALGFAWTESTREAFNFCIY*DWKNCF
Trigger: GAAGCAGTTCTTCCAATCCCAGTAGATGCAAAAGTT...GAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGGGGAATATGCTAACTTTTGCATCTACTaGGATTGGAAGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSSQEGDDAQGSALGEYANFCIY*DWKNCF
Trigger: GAAGCAGTTCTTCCAATCCCAGTAGATGCAAAAGTT...AGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATTGTCTCTGAAGGGCTaGGTTCCATGGTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPLSLKG*VPWSEE
Trigger: TTCCTCAGACCATGGAACCCAGCCCTTCAGAGACAA...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCCCTGTTTTCAGTCTCTaGGGCACCATTGCACACAAG +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSPVFSL*GTIAHK
Trigger: CTTGTGTGCAATGGTGCCCCAGAGACTGAAAACAGG...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGAAGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTTGCCCTCTTTTAGCCCTGTTTTCAGTCTCTaGGGCACCATTGCACACAAG +
Preference number: 4 (lower is better)
Translates to: RRRNSCQVRSLTALPSFSPVFSL*GTIAHK
Trigger: CTTGTGTGCAATGGTGCCCCAGAGACTGAAAACAGG...GCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTTTTTGGACCATATCAAAGCTCACTGAGGAAAGGTGCCCTGAATCTCCTCAAGTACCAGCCTCCCCATTaGCGCAATGCCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: VFGPYQSSLRKGALNLLKYQPPH*RNAHWV
Trigger: CACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTA...CTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAGCTTTGATATGGTCCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCTACCAGCCTCCCCATTaGCGCAATGCCCATTGGGTG +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFYQPPH*RNAHWV
Trigger: CACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTA...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTCCATCATCGTCCAGGTaGCTGCGGGAAGGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTIPSSSR*LREGWS
Trigger: CGACCAGCCTTCCCGCAGCCACCTGGACGATGATGG...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCCTCTCTGTGTGGAGAGAGGGCGGGAAGGAGACCTCTAGTTGACTGCATAACCTCTGGTTACAACAACTaGAGCAGAATACGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSLCGERAGRRPLVDCITSGYNN*SRIRSH
Trigger: GTGGGAACGTATTCTGCTCCAGTTGTTGTAACCAGA...GGTTATGCAGTCAACTAGAGGTCTCCTTCCCGCCCTCTCTCCACACAGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCACTTGCATACTCGACTaGGTTCAAAGAGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSTCILD*VQRAAG
Trigger: GCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGT...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCATAGGAACAGCAGCTTaGCCACTGCCCACCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFIGTAA*PLPTQV
Trigger: GACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTAT...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CCTCACCTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTCAATCTACAATCCAGTaGTGCATCCCAAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: PHLLQSGGYSCSPGDRSLQSTIQ*CIPNLS
Trigger: TGACAGATTTGGGATGCACCACTGGATTGTAGATTG...AAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACGACCAGGCCCCAGAATaGGGACCCAGGTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYDQAPE*GPRCVW
Trigger: CCAGACACACCTGGGTCCCCATTCTGGGGCCTGGTC...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACCAAGTGGCCCTTCACTGAAACTGTGTTGCCACTaGAAGTCAGAGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GHVTSLRNPTKSPSGPSLKLCCH*KSETCS
Trigger: TGAGCACGTCTCTGACTTCCAGTGGCAACACAGTTT...CAGTGAAGGGCCACTTGGTGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCTTTTCAAACGCCTGCTaGGTGGCACTTACGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLFSNAC*VALTAF
Trigger: GAAAGCCGTAAGTGCCACCCAGCAGGCGTTTGAAAA...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCAGCTTCACCAGCATCTTaGCTCTTCATCTCCCTACCC +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSASPAS*LFISLP
Trigger: GGGTAGGGAGATGAAGAGCCAAGATGCTGGTGAAGC...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCCCTGTGCTGGCTGAGGAAGAGATTGTTTAGGGGACCAGGCCCCAGAATGGGGATCCAAAAGTCCAAATaGATAGTCACTTTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLCWLRKRLFRGPGPRMGIQKSK*IVTLLH
Trigger: GTGGAGCAAAGTGACTATCCATTTGGACTTTTGGAT...CCCCATTCTGGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCAGCACAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGAAGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTTGCCCTCTTTTAGCCTGCACCTACGACACTaGATTATAGCACTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRRNSCQVRSLTALPSFSLHLRH*IIALAG
Trigger: TCCTGCCAGTGCTATAATCCAGTGTCGTAGGTGCAG...GCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCTCTGTGCTCTCTCCATaGAGTTCAAGGAAAGGAACC +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSSVLSP*SSRKGT
Trigger: GGTTCCTTTCCTTGAACTTCATGGAGAGAGCACAGA...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCACTCTTCAGCCACTCTTaGCACTGCTCAAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPLFSHS*HCSKVE
Trigger: TTCAACCTTTGAGCAGTGTCAAGAGTGGCTGAAGAG...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGACAACCTGGCAGCTCAAAGTCACAGTTCATGCCCTGTTGCTTCAGACCAAATTCCAGGCAGGCACTATaGGCTCTTGAGGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: RQPGSSKSQFMPCCFRPNSRQAL*ALEDSY
Trigger: GTAGCTATCCTCAAGAGCTCATAGTGCCTGCCTGGA...ATTTGGTCTGAAGCAACAGGGCATGAACTGTGACTTTGAGCTGCCAGGTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGAGCAACCGCAGAGACTaGAAACTCCTCCGAATAGAA +
Preference number: 4 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKSNRRD*KLLRIE
Trigger: TTCTATTCGGAGGAGTTTTCAGTCTCTGCGGTTGCT...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACGCCTGCCCGAAGAAGTaGCCACACGGAACATGTCCG +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYACPKK*PHGTCP
Trigger: CGGACATGTTCCGTGTGGTCACTTCTTCGGGCAGGC...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATGTGAAGTCCAATGGCTaGGGCCTCAGGTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDVKSNG*GLRCLP
Trigger: AGGAAGACACCTGAGGCCTCAGCCATTGGACTTCAC...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACACCTGGGGGCTGCTCTaGGGCCCTGTTTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYTWGLL*GPVFSL
Trigger: GAGACTGAAAACAGGGCCTCAGAGCAGCCCCCAGGT...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGCAGCTGACGGCTCAGTaGGTCCTTGCTCCTACCAGC +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVQLTAQ*VLAPTS
Trigger: GCTGGTAGGAGCAAGGACTCACTGAGCCGTCAGCTG...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GTTTTTGGACCATATCAAAGCTCACTGAGGAAAGGTGCCCTGAATCTCCTCAAGCTCATAGCAGACAGCTaGCGGCTCAGTGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VFGPYQSSLRKGALNLLKLIADS*RLSESL
Trigger: CAAGGACTCACTGAGCCGTCAGCTGTCTGCTATGAG...CTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAGCTTTGATATGGTCCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGTTCCTGCTGGTGGCCTaGCTCAATCTGACGCAGGCG +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVFLLVA*LNLTQA
Trigger: CGCCTGCGTCAGATTGAGTCAGGCCACCAGCAGGAA...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp GAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAACCTGCACGACTAGATaGCACAGAATGTGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: ETHLALGQGTATKGKRNTTCTTR*HRMWKR
Trigger: TCTTTTCCACATTCTGTGTCATCTAGTCGTGCAGGT...TGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTGAACTGTATAGGAGCACTGACTaGCTCCTCTTTAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LLQSGGYSCSPGDRSLELYRSTD*LLFRRK
Trigger: TTTTCTCCTAAAGAGGAGTCAGTCAGTGCTCCTATA...CAGTTCAAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCCTGGCAGCAGCTAAATaGAATCCTGCAACAGCACCT +
Preference number: 4 (lower is better)
Translates to: GCHLPCASPSKHQPHLSILAAAK*NPATAP
Trigger: AGGTGCTGTTGCAGGATTTCATTTAGCTGCTGCCAG...GATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTCACACAACATGCAGATaGGCTCTACACCAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSHTTCR*ALHQPR
Trigger: TCTCGGCTGGTGTAGAGCTCATCTGCATGTTGTGTG...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAAATCTAATAAAGCTTTaGATGGGCCTGGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPNLIKL*MGLEAP
Trigger: GGGAGCCTCCAGGCCCATTCAAAGCTTTATTAGATT...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATGGCATAGACCTCCATaGACCAAGCATGGTATGCAA +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPWHRPP*TKHGMQ
Trigger: TTGCATACCATGCTTGGTGCATGGAGGTCTATGCCA...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGAATAGAATGAATGTTTaGCATCCCCATAAACACAAC +
Preference number: 4 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLNRMNV*HPHKHN
Trigger: GTTGTGTTTATGGGGATGGCAAACATTCATTCTATT...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AGACAACCTGGCAGCTCAAAGTCACAGTTCATGCCCTGTTGCTTCAGACCAAATAAGATGTTCTCCATCTaGCCCTCAGCTACTCCGGCT +
Preference number: 4 (lower is better)
Translates to: RQPGSSKSQFMPCCFRPNKMFSI*PSATPA
Trigger: AGCCGGAGTAGCTGAGGGGCAGATGGAGAACATCTT...ATTTGGTCTGAAGCAACAGGGCATGAACTGTGACTTTGAGCTGCCAGGTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTAAGATGTTCTCCATCTaGCCCTCAGCTACTCCGGCT +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSKMFSI*PSATPA
Trigger: AGCCGGAGTAGCTGAGGGGCAGATGGAGAACATCTT...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTCTTTGGTGGCCTCCTaGAAGATGTTCTCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GCHLPCASPSKHQPHLSISLVAS*KMFSIC
Trigger: GCAGATGGAGAACATCTTGCAGGAGGCCACCAAAGA...GATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCTTCCTCCCTACCCTCTaGAATCTCTTCTATTCGAAA +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCFLPTL*NLFYSK
Trigger: TTTCGAATAGAAGAGATTGCAGAGGGTAGGGAGGAA...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTTTCCTCCCTACCCTCTaGAATCTCTTCTATTCGAAA +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVFLPTL*NLFYSK
Trigger: TTTCGAATAGAAGAGATTGCAGAGGGTAGGGAGGAA...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAGAGGAAGCCTGTCCTTaGCACTATTTACAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPEEACP*HYLQGK
Trigger: CTTGCCTTGTAAATAGTGGCAAGGACAGGCTTCCTC...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTTCTCTGGGGCACCATTaGACACAAGCCCCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSSLGHH*TQAPLY
Trigger: GTAAAGAGGGGCTTGTGTGCAATGGTGCCCCAGAGA...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GTTTTTGGACCATATCAAAGCTCACTGAGGAAAGGTGCCCTGAATCTCCTCAAGCTAAGACCTGGGGGCTaGTCTGAGGCCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VFGPYQSSLRKGALNLLKLRPGG*SEALFS
Trigger: TGAAAACAGGGCCTCAGAGCAGCCCCCAGGTCTTAG...CTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAGCTTTGATATGGTCCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTATCCCCATTGGCGCAATaGCCATTGGGTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLSPLAQ*PLGVGY
Trigger: GTACCCCACACCCAATGGGCATTGCGCCAATGGGGA...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCCCCATTGGCGCAATaGCCATTGGGTGTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGSPLAQ*PLGVGY
Trigger: GTACCCCACACCCAATGGGCATTGCGCCAATGGGGA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTAGGCTCAGTGAGTCCTTaGTCCTACCAGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLGSVSP*SYQPPH
Trigger: ATGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCC...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACTTCATAAGAGACGTGCTCAGATaGTCTGGGCTTTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LCVDTMAMAHTHGFHNFIRDVLR*SGLCLD
Trigger: GTCCAGGCAAAGCCCAGAGCATCTGAGCACGTCTCT...TATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCACGTTCAAACTGTGTTaGCACTGGAAGTCAGAGACG +
Preference number: 4 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLTFKLC*HWKSET
Trigger: CGTCTCTGACTTCCAGTGGCAACACAGTTTGAACGT...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCATTGTTTTCAAACGCCTaGTGGGTGGCACTTACGGCT +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSLFSNA*WVALTA
Trigger: AGCCGTAAGTGCCACCCAGCAGGCGTTTGAAAACAA...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGATCCTCACTGCACCTaGTTCACCAGCATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSDPHCT*FTSILA
Trigger: AGCCAAGATGCTGGTGAAGCAGGTGCAGTGAGGATC...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAGAGGCTACTGGTATCTaGACACAACATGCAGATGAG +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPEATGI*TQHADE
Trigger: CTCATCTGCATGTTGTGTGCAGATACCAGTAGCCTC...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCTACAGCAGAACCAATaGTGTTACAATAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMLQQNQ*CYNRQA
Trigger: TGCTTGCCTATTGTAACAGCATTGGTTCTGCTGTAG...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCATGGGAAAGATCTGATTaGCCTGGATGCACTCAAGGC +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSWERSD*PGCTQG
Trigger: GCCTTGAGTGCATCCAGGCCAATCAGATCTTTCCCA...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGTCCATGCACCAAGCATaGTATGCAAATGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMSMHQA*YANEKR
Trigger: TCTCTTCTCATTTGCATACCATGCTTGGTGCATGGA...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTCCACCAGCTAACCTCTaGCTGTCCACAGCGGGCAAT +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGPPANL*LSTAGN
Trigger: ATTGCCCGCTGTGGACAGCCAGAGGTTAGCTGGTGG...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAAAAGGTCTCCCCCATTaGGAAAGTCTCGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPKGLPH*ESLEKC
Trigger: ACACTTCTCGAGACTTTCCCAATGGGGGAGACCTTT...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAAGTTTGGGTAATACTCTaGGCATTCGCAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQVWVIL*AFAASS
Trigger: GGAGGAGGCTGCGAATGCCCAGAGTATTACCCAAAC...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGGTTTGGGTAATACTCTaGGCATTCGCAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLVWVIL*AFAASS
Trigger: GGAGGAGGCTGCGAATGCCCAGAGTATTACCCAAAC...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCATTTCCACGAGGACCTaGAAACCCTCTATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: GCHLPCASPSKHQPHLSIISTRT*KPSMVR
Trigger: CCGAACCATAGAGGGTTTCCAGGTCCTCGTGGAAAT...GATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATTCAATGCCTGCCCTGTaGGCAGGTTCCTCTACTCCA +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDSMPAL*AGSSTP
Trigger: TGGAGTAGAGGAACCTGCCCACAGGGCAGGCATTGA...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAACTTTTGCATCTACTaGGATTGGAAGAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SALGEYASSLPSSKGFPTNFCIY*DWKNCF
Trigger: GAAGCAGTTCTTCCAATCCCAGTAGATGCAAAAGTT...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTTTTTGGACCATATCAAAGCTCACTGAGGAAAGGTGCCCTGAATCTCCTCAAGGATGGCCTTCCTGAGTaGCTATGCAGCCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: VFGPYQSSLRKGALNLLKDGLPE*LCSHLW
Trigger: CCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATC...CTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAGCTTTGATATGGTCCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCGACTCTTCAGCTCCTaGACTTGTTTCTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPRLFSS*TCFFKV
Trigger: AACTTTGAAGAAACAAGTCCAGGAGCTGAAGAGTCG...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCAGTGTCCCTGCAGTaGTGCTTCCTGCTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGSVSLQ*CFLLAS
Trigger: GCTTGCCAGCAGGAAGCACCACTGCAGGGACACTGA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCGGAACTGGAACCTTCTaGTTACAACAACTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSGTGTF*LQQLEQ
Trigger: CTGCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCC...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCTGCTGGCTGGGAACTaGAACCTTCTGGTTACAACA +
Preference number: 4 (lower is better)
Translates to: KGMPFTVCLSLQTSASFILLAGN*NLLVTT
Trigger: TGTTGTAACCAGAAGGTTCCAGTTCCCAGCCAGCAG...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACAAAGAGCTGCTGGCTaGGAACTGGAACCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQQRAAG*ELEPSG
Trigger: ACCAGAAGGTTCCAGTTCCCAGCCAGCAGCTCTTTG...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCAATGCTGGAGCTTGTaGGATGTAGGCTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHQCWSL*DVGCYS
Trigger: GCTATAGCAGCCTACATCCCACAAGCTCCAGCATTG...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTGCTCGGCAGTTACAGTaGGCCTGGCAACCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTIARQLQ*AWQPLV
Trigger: GACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGC...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCGCTCTGATGTGGCGGTaGCGTGAGGAATGGTTGCAT +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFALMWR*REEWLH
Trigger: ATGCAACCATTCCTCACGCCACCGCCACATCAGAGC...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGGAGCCCAAGACAATCTaGGTCAAGTTAAAAATGGGA +
Preference number: 4 (lower is better)
Translates to: HLSICEGTGSAPRRREMMEPKTI*VKLKMG
Trigger: TCCCATTTTTAACTTGACCCAGATTGTCTTGGGCTC...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TTCAAATCAGCCCTCATTCCCAAAAGATCAATAGAGGTCAGGGCTAGAGTTAACAAGTGCTACACAGCCTaGCCCAGGAAAGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: FKSALIPKRSIEVRARVNKCYTA*PRKAAP
Trigger: GGGGGCTGCTTTCCTGGGCCAGGCTGTGTAGCACTT...GTTAACTCTAGCCCTGACCTCTATTGATCTTTTGGGAATGAGGGCTGATTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCGTATCATAACCTCTTaGCACCTGTCACTAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPRIITS*HLSLGN
Trigger: ATTTCCTAGTGACAGGTGCCAAGAGGTTATGATACG...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CAA 72 bp AGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTaGCCCTCTTTTAGCCTGGGAGATTTTAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: RRNSCQVRSLTA*PSFSLGDFRSK
Trigger: TTTGCTCCTAAAATCTCCCAGGCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CCTCACCTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTTTCTTTCCCTTATGGTaGAGTCAAATGAAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: PHLLQSGGYSCSPGDRSLFFPLW*SQMKFV
Trigger: GACAAACTTCATTTGACTTCACCATAAGGGAAAGAA...AAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAGGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACGTCCACAGCGGGCAATaGCAGCTCCATTGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYVHSGQ*QLHCSG
Trigger: ACCAGAGCAATGGAGCTGTCATTGCCCGCTGTGGAC...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCCTCCTCCGAATAGAATaGATGTTTGCCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSLLRIE*MFAIPI
Trigger: TATGGGGATGGCAAACATTCATTCTATTCGGAGGAG...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTCAAGGAATGCTTCATTaGACTCAAAAGAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KGSQPALMWRWREEWLHVQGMLH*TQKSKE
Trigger: TTCCTTGCTCTTTTGAGTTCAATGAAGCATTCCTTG...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAATTGGGGCCCACTTACTaGCTTCACCTTATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQLGPTY*LHLIFH
Trigger: GTGGAAGATAAGGTGAAGTCAGTAAGTGGGCCCCAA...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTGCAGATGGCCTTCCTaGGTGGCTATGCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGCRWPS*VAMQPL
Trigger: AAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCCGTGTCTGTGTACACTaGCATGCCATCATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFRVCVH*HAIIVQ
Trigger: CTGGACGATGATGGCATGTCAGTGTACACAGACACG...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATTCATTTATCCATCTGTaGGGGGACTGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDSFIHL*GDWLSS
Trigger: GGAGCTGAGCCAGTCCCCTCACAGATGGATAAATGA...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCAGGCAGGCTTTGGCCTTaGCTGCATAAACATTTTGAC +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSGRLWP*LHKHFD
Trigger: GTCAAAATGTTTATGCAGTCAAGGCCAAAGCCTGCC...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACATTCTTCAACAGCATCTaGGCCTCATGGGTTATGTTT +
Preference number: 4 (lower is better)
Translates to: ETHLALGQGTATKGKRNTFFNSI*ASWVMF
Trigger: AAACATAACCCATGAGGCTCAGATGCTGTTGAAGAA...TGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGGGGAATATGCTAATAGAATGAATGTTTaGCATCCCCATAAACACAAC +
Preference number: 4 (lower is better)
Translates to: SSSQEGDDAQGSALGEYANRMNV*HPHKHN
Trigger: GTTGTGTTTATGGGGATGGCAAACATTCATTCTATT...AGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCGATGGAGCCATTTTGTaGTTTCAAGAGCTGATAGCC +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSDGAIL*FQELIA
Trigger: GGCTATCAGCTCTTGAAAGCACAAAATGGCTCCATC...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCTCTCCTTGGCGTTGTTaGACAGGAATGTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLSPWRC*TGMFQT
Trigger: TGTTTGGAACATTCCTGTGCAACAACGCCAAGGAGA...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTGATCATCAGGGCTGGTaGCTGGGGCTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: SSIRPTFSLPARLDDTECDHQGW*LGLGMV
Trigger: CACCATACCCAGCCCCAGGCACCAGCCCTGATGATC...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTGAGGTCTTCTATTCGAAACTaGTCCACAGGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IYRVPLPPNISLIYPSVRSSIRN*STGTSR
Trigger: CCTGGAGGTCCCTGTGGAGCAGTTTCGAATAGAAGA...CCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCTAAGACCTGGGGGCTaGTCTGAGGCCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWLRPGG*SEALFS
Trigger: TGAAAACAGGGCCTCAGAGCAGCCCCCAGGTCTTAG...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTCTAAGACCTGGGGGCTaGTCTGAGGCCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGLRPGG*SEALFS
Trigger: TGAAAACAGGGCCTCAGAGCAGCCCCCAGGTCTTAG...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGGCTCAGTGAGTCCTTaGTCCTACCAGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVGSVSP*SYQPPH
Trigger: ATGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCC...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATCTTCCTGAGTGGCTATaGAGCCACTTGTGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDLPEWL*SHLWCK
Trigger: CTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAG...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GTTTTTGGACCATATCAAAGCTCACTGAGGAAAGGTGCCCTGAATCTCCTCAAGACTGGCTTTCTTCCCTaGTCACGGTCTCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: VFGPYQSSLRKGALNLLKTGFLP*SRSQIS
Trigger: GGAGATCTGAGACCGTGAGCAGGGAAGAAAGCCAGT...CTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAGCTTTGATATGGTCCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCGGCACAAAACATGGATaGCAAGATTACAAAGCACAA +
Preference number: 4 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCGTKHG*QDYKAQ
Trigger: TTGTGCTTTGTAATCTTGGCATCCATGTTTTGTGCC...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GGCTGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTTGAGGCGAGAGGTAAGGGATGCCCAACAGTaGTGTAGGGTAAAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: GCPEIRAAAKNGALRREVRDAQQ*CRVKKN
Trigger: ATTTTTCTTTACCCTACAGCACTGTTGGGCATCCCT...TACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCGCCCTTCCTAGGCCATaGCAGTGTTTTAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIALPRP*QCFNLL
Trigger: CAGCAAATTAAAACACTGGCATGGCCTAGGAAGGGC...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGGATCAGCTGCTTCCTaGGAAAGATCTGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSGSAAS*ERSDWP
Trigger: AGGCCAATCAGATCTTTCCCAGGAAGCAGCTGATCC...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GTTTTTGGACCATATCAAAGCTCACTGAGGAAAGGTGCCCTGAATCTCCTCAAGAGTTACATGCTCCCCTaGTCTGCACAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: VFGPYQSSLRKGALNLLKSYMLP*SAQVSM
Trigger: CATGGAGACCTGTGCAGACCAGGGGAGCATGTAACT...CTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAGCTTTGATATGGTCCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCCACTGCAGAAACACTaGGCAACGTTCATTCAGATC +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHPLQKH*ATFIQI
Trigger: GATCTGAATGAACGTTGCCCAGTGTTTCTGCAGTGG...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAATGTCGTCCACAGGGGTaGTTGGGGATGGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKCRPQG*LGMGRA
Trigger: TGCCCTGCCCATCCCCAACCACCCCTGTGGACGACA...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACTTCATACTTGGTGAAGTCCAATaGCTGAGGCCTCAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: LCVDTMAMAHTHGFHNFILGEVQ*LRPQVS
Trigger: AGACACCTGAGGCCTCAGCCATTGGACTTCACCAAG...TATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCTGCATCTACTGGGATTaGAAGAACTGCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KGMPFTVCLSLQTSASFICIYWD*KNCFLP
Trigger: AGGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCA...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGGTCTCAAAAGGGACTTaGGAAGGTAGCAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKVSKGT*EGSREH
Trigger: ATGTTCTCTGCTACCTTCCCAAGTCCCTTTTGAGAC...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCAGAACTGTCCACGTTTaGTCCTCTGGTCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GCHLPCASPSKHQPHLSIRTVHV*SSGLKR
Trigger: CCTTTTGAGACCAGAGGACCAAACGTGGACAGTTCT...GATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGAAGGGCTGGGTTCCATaGTCTGAGGAAGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWKGWVP*SEEACP
Trigger: AGGACAGGCTTCCTCAGACCATGGAACCCAGCCCTT...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTCGACTCTTCAGCTCCTaGACTTGTTTCTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASRLFSS*TCFFKV
Trigger: AACTTTGAAGAAACAAGTCCAGGAGCTGAAGAGTCG...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTTCAAGGTCAATGCTaGAGCTTGTGGGATGTAGGC +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSVQGQC*SLWDVG
Trigger: GCCTACATCCCACAAGCTCCAGCATTGACCTTGAAC...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGGAAGTGGCAGCAATaGGCTTATCCAGTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: GCHLPCASPSKHQPHLSIWKWQQ*AYPVQG
Trigger: ACCTTGAACTGGATAAGCCCATTGCTGCCACTTCCA...GATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATCAGTTACAGTGGGCCTaGCAACCCTTGGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDQLQWA*QPLVFH
Trigger: ATGGAAGACCAAGGGTTGCCAGGCCCACTGTAACTG...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTGCTCTGATGTGGCGGTaGCGTGAGGAATGGTTGCAT +
Preference number: 4 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWAALMWR*REEWLH
Trigger: ATGCAACCATTCCTCACGCCACCGCCACATCAGAGC...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CCTCACCTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTGCAAATGCTACCATGTaGAACACTCAACTTTATTTG +
Preference number: 4 (lower is better)
Translates to: PHLLQSGGYSCSPGDRSLANATM*NTQLYL
Trigger: CAAATAAAGTTGAGTGTTCCACATGGTAGCATTTGC...AAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAGGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 72 bp AAGAACTACACCCTGTTTCACCACGTTCAAACTGTGTaGCCACTGGAAGTCAGAGACGTGCTCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: KNYTLFHHVQTV*PLEVRDVLRCS
Trigger: AGAGCATCTGAGCACGTCTCTGACTTCCAGTGGCAACACAGTTTGAACGTGGTGAAACAGGGTGTAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CAA 72 bp TGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTaGAGGCGAGAGGTAGTTGTAATGACTACTGATGGG +
Preference number: 4 (lower is better)
Translates to: CPEIRAAAKNGA*RREVVVMTTDG
Trigger: CCCATCAGTAGTCATTACAACTACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCTCAAGGAAAGGAACCTaGAGATTCTCATCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFSRKGT*RFSSSR
Trigger: CCGGGAGGATGAGAATCTTCAGGTTCCTTTCCTTGA...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGAATTGGAAAGGGCAATaGTGGCATCCTCGGCACGGC +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVNWKGQ*WHPRHG
Trigger: GCCGTGCCGAGGATGCCATCATTGCCCTTTCCAATT...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp CTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACTTCATAGAACATGTCCGTTCCTaGGTATGCTTTTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LCVDTMAMAHTHGFHNFIEHVRS*VCFSPL
Trigger: GAGAGGGGAAAAGCATACTCAGGAACGGACATGTTC...TATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATAATACAGTAGGTTTTTaGAAGCCTTGTTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHNTVGF*KPCCLP
Trigger: GGGCAGGCAACAAGGCTTTCAAAAACCTACTGTATT...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAAACCTGGGGGCTGCTCTaGGGCCCTGTTTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKETWGLL*GPVFSL
Trigger: GAGACTGAAAACAGGGCCTCAGAGCAGCCCCCAGGT...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATTGGCCTGACTCAATCTaGCGCAGGCGCTGTTGGATC +
Preference number: 4 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDWPDSI*RRRCWI
Trigger: GATCCAACAGCGCCTGCGTCAGATTGAGTCAGGCCA...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCTTTCCCTGTGCTGGCTaGGGAAGAGATTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFFPCAG*GRDCLG
Trigger: CCCTAAACAATCTCTTCCTCAGCCAGCACAGGGAAA...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCAAAGGAGACCTCTAGTTaGCTGCATAACCCAATCACA +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSKETSS*LHNPIT
Trigger: TGTGATTGGGTTATGCAGTCAACTAGAGGTCTCCTT...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAGACTGCCCCAAAGAGTaGAGGCCTCTGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKDCPKE*RPLGSS
Trigger: AGAGCTCCCCAGAGGCCTTCACTCTTTGGGGCAGTC...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGCGGACTGAGGGTAGCTaGGATGGCACATTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVRTEGS*DGTFSF
Trigger: GAAGGAGAATGTGCCATCTCAGCTACCCTCAGTCCG...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGTTTCACAACTTCATATaGATACACAGACTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKFHNFI*IHRLGC
Trigger: GCAGCCCAGTCTGTGTATTCATATGAAGTTGTGAAA...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACCATGCTCCCCTGGTCTaGACAGGTCTCCATGTTGCT +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYHAPLV*TGLHVA
Trigger: AGCAACATGGAGACCTGTGCAGACCAGGGGAGCATG...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAAGTTTGCCACAGCAGCTaGATAGGAGCGTGCATCCAA +
Preference number: 4 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKVCHSS*IGACIQ
Trigger: TTGGATGCACGCTCCTATGCAGCTGCTGTGGCAAAC...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTGTTTGCCACAGCAGCTaGATAGGAGCGTGCATCCAA +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGVCHSS*IGACIQ
Trigger: TTGGATGCACGCTCCTATGCAGCTGCTGTGGCAAAC...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCACACAGTCAAGCCACTaGAGAAACACTGGGCAACGT +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFTQSSH*RNTGQR
Trigger: ACGTTGCCCAGTGTTTCTGCAGTGGCTTGACTGTGT...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCTGTGTACACTGACATaGCATCATCGTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWLCTLT*HHRPGG
Trigger: GCCACCTGGACGATGATGGCATGTCAGTGTACACAG...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAAGTGGCAAAGGGGGACTaGTCAGCAGTTATTCCTGTC +
Preference number: 4 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKVAKGD*SAVIPV
Trigger: GACAGGAATAACTGCTGAGCAGTCCCCCTTTGCCAC...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAACTCACTGAGGAAAGGTaGCCTGAATCTCCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKLTEER*PESPQG
Trigger: GCCTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAG...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTGGCCAGAGTACTGGCTaGCCTGAAATCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTIGQSTG*PEIRAA
Trigger: TGCTGCTCTGATTTCAGGGCAGCCAGTACTCTGGCC...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCTCCATGCACCAAGCATaGTATGCAAATGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSSMHQA*YANEKR
Trigger: TCTCTTCTCATTTGCATACCATGCTTGGTGCATGGA...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTAGCTTCTGCGGTTGGATaGCTAAACTCTCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLASAVG*LNSLLL
Trigger: CAGGAGCAGAGAGTTTAGCCATCCAACCGCAGAAGC...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCAAAAGCTTCTGCGGTTaGATGGCTAAACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GCHLPCASPSKHQPHLSIKSFCG*MAKLSA
Trigger: AGCAGAGAGTTTAGCCATCCAACCGCAGAAGCTTTT...GATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCCCAATTTCCCGGATCTaGCATCTGAGTGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFPISRI*HLSAQQ
Trigger: TTGCTGTGCACTCAGATGCCAGATCCGGGAAATTGG...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GTTTTTGGACCATATCAAAGCTCACTGAGGAAAGGTGCCCTGAATCTCCTCAAGCCAATTTCCCGGATCTaGCATCTGAGTGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: VFGPYQSSLRKGALNLLKPISRI*HLSAQQ
Trigger: TTGCTGTGCACTCAGATGCCAGATCCGGGAAATTGG...CTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAGCTTTGATATGGTCCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGCCTGGAAACCCTCTATaGTTCGGTAATAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLPGNPL*FGNKGP
Trigger: TGGACCCTTATTACCGAACCATAGAGGGTTTCCAGG...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAACCACTGCAGAAACACTaGGCAACGTTCATTCAGATC +
Preference number: 4 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQPLQKH*ATFIQI
Trigger: GATCTGAATGAACGTTGCCCAGTGTTTCTGCAGTGG...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATGTCTCAAAAGGGACTTaGGAAGGTAGCAGAGAACAT +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHVSKGT*EGSREH
Trigger: ATGTTCTCTGCTACCTTCCCAAGTCCCTTTTGAGAC...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTCCACGTTTGGTCCTCTaGTCTCAAAAGGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGPRLVL*SQKGLG
Trigger: CCCAAGTCCCTTTTGAGACCAGAGGACCAAACGTGG...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACTTCATACCTGTTTTCAGTCTCTaGGGCACCATTGCACACAAG +
Preference number: 4 (lower is better)
Translates to: LCVDTMAMAHTHGFHNFIPVFSL*GTIAHK
Trigger: CTTGTGTGCAATGGTGCCCCAGAGACTGAAAACAGG...TATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGAATGCCCATTGGGTGTaGGGTACATCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVNAHWV*GTSGGC
Trigger: GCACCCTCCAGATGTACCCCACACCCAATGGGCATT...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTAATGCCCATTGGGTGTaGGGTACATCTGGAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTINAHWV*GTSGGC
Trigger: GCACCCTCCAGATGTACCCCACACCCAATGGGCATT...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGATGGCCTTCCTGAGTaGCTATGCAGCCACTTGTGG +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVDGLPE*LCSHLW
Trigger: CCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATC...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACAGTGGTGCTTCCTGCTaGCAAGCCAGAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYSGASC*QARRHC
Trigger: ACAGTGCCTTCTGGCTTGCCAGCAGGAAGCACCACT...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCAAAGAGCTGCTGGCTaGGAACTGGAACCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWQRAAG*ELEPSG
Trigger: ACCAGAAGGTTCCAGTTCCCAGCCAGCAGCTCTTTG...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGAGCTTCAGTTGGAAGTaGCAGCAATGGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLSFSWK*QQWAYP
Trigger: TGGATAAGCCCATTGCTGCCACTTCCAACTGAAGCT...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCCAATCTACAATCCAGTaGTGCATCCCAAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSQSTIQ*CIPNLS
Trigger: TGACAGATTTGGGATGCACCACTGGATTGTAGATTG...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTCGGTGGCGTGAGGAATaGTTGCATGTTAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTIRWREE*LHVSTG
Trigger: GCCAGTGCTAACATGCAACCATTCCTCACGCCACCG...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAAAGTGCTACACAGCCTaGCCCAGGAAAGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKKCYTA*PRKAAP
Trigger: GGGGGCTGCTTTCCTGGGCCAGGCTGTGTAGCACTT...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATGGGAAGATCCATGATTaGTTTGGTTTGGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDGKIHD*FGLGTG
Trigger: CCCCGTTCCCAAACCAAACCAATCATGGATCTTCCC...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACCAAGTGGCCCTTCACTGTTTATTCAACTTAAATaGTCACCGAGGCTACAGCAG +
Preference number: 4 (lower is better)
Translates to: GHVTSLRNPTKSPSGPSLFIQLK*SPRLQQ
Trigger: CTGCTGTAGCCTCGGTGACCATTTAAGTTGAATAAA...CAGTGAAGGGCCACTTGGTGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTTCCTGGGAAAGATCTaGTTGGCCTGGATGCACTCA +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGFLGKI*LAWMHS
Trigger: TGAGTGCATCCAGGCCAATCAGATCTTTCCCAGGAA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATTCTGTGCTCTCTCCATaGAGTTCAAGGAAAGGAACC +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDSVLSP*SSRKGT
Trigger: GGTTCCTTTCCTTGAACTTCATGGAGAGAGCACAGA...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGAGAAGTGTTCCTAGTTaGCAGCTTGCTGCCACTCGA +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWRSVPS*QLAATR
Trigger: TCGAGTGGCAGCAAGCTGTCAACTAGGAACACTTCT...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCAGCAACCGCAGAGACTaGAAACTCCTCCGAATAGAA +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFSNRRD*KLLRIE
Trigger: TTCTATTCGGAGGAGTTTTCAGTCTCTGCGGTTGCT...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTGAACATGTCCGTTCCTaGGTATGCTTTTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGEHVRS*VCFSPL
Trigger: GAGAGGGGAAAAGCATACTCAGGAACGGACATGTTC...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGCGTGTCTGTGTACACTaGCATGCCATCATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVRVCVH*HAIIVQ
Trigger: CTGGACGATGATGGCATGTCAGTGTACACAGACACG...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATTCCCTCAGTGTCACGTaGCAGCAGGCAGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHSLSVT*QQAARQ
Trigger: CTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGGA...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTTTCCCTGTGCTGGCTaGGGAAGAGATTGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGFPCAG*GRDCLG
Trigger: CCCTAAACAATCTCTTCCTCAGCCAGCACAGGGAAA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATTGTAACTCTAAAGGCTaGTTCTACCCCTTAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHCNSKG*FYPLKG
Trigger: TCCCTTTAAGGGGTAGAATCAGCCTTTAGAGTTACA...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCCAGGTCAGATCCCTaGCTGCTTTGCCCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVARSDP*LLCPLL
Trigger: TAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGC...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGAGTTGTAATGACTACTaGTGGGAACTCTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKSCNDY*WELFRE
Trigger: TTCTCTGAAGAGTTCCCATCAGTAGTCATTACAACT...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATTTTCACAACTTCATATaGATACACAGACTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHFHNFI*IHRLGC
Trigger: GCAGCCCAGTCTGTGTATTCATATGAAGTTGTGAAA...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTCTGGCAGCAGCTAAATaGAATCCTGCAACAGCACCT +
Preference number: 4 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWALAAAK*NPATAP
Trigger: AGGTGCTGTTGCAGGATTTCATTTAGCTGCTGCCAG...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTATCTGGTCCTGCCCTTaGGAAATCTTGTCAGTAATC +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSIWSCP*EILSVI
Trigger: GATTACTGACAAGATTTCTCAAGGGCAGGACCAGAT...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTATCTCTCCTAAGAGGCTaGGCTGATTCATACCCTGCA +
Preference number: 4 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLSLLRG*ADSYPA
Trigger: TGCAGGGTATGAATCAGCTCAGCCTCTTAGGAGAGA...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTAAGCAGGTGGTCGGATTaGGTTGTTCAGTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLSRWSD*VVQSLQ
Trigger: CTGAAGAGACTGAACAACGCAATCCGACCACCTGCT...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTAACCTTGAAGTTACATaGTCCCCTGGTCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGNLEVT*SPGLHR
Trigger: CCTGTGCAGACCAGGGGAGCATGTAACTTCAAGGTT...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGAGCTGCATAGGAGCGTaGATCCAAGATCAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLSCIGA*IQDQKL
Trigger: AAGCTTTTGATCTTGGATGCACGCTCCTATGCAGCT...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGATCTGGCATCTGAGTaGACAGCAACCGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVDLASE*TATAET
Trigger: AGTCTCTGCGGTTGCTGTGCACTCAGATGCCAGATC...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGATGGAGCCATTTTGTaGTTTCAAGAGCTGATAGCC +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSDGAIL*FQELIA
Trigger: GGCTATCAGCTCTTGAAAGCACAAAATGGCTCCATC...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTCTTCTATTCGAAACTaGTCCACAGGGACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWSSIRN*STGTSR
Trigger: CCTGGAGGTCCCTGTGGAGCAGTTTCGAATAGAAGA...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAGGCTCAGTGAGTCCTTaGTCCTACCAGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKGSVSP*SYQPPH
Trigger: ATGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCC...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAAGGCTCAGTGAGTCCTTaGTCCTACCAGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKEGSVSP*SYQPPH
Trigger: ATGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCC...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TTCAAATCAGCCCTCATTCCCAAAAGATCAATAGAGGTCAGGGCTAGAGTTAACCTTCCTGAGTGGCTATaGAGCCACTTGTGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: FKSALIPKRSIEVRARVNLPEWL*SHLWCK
Trigger: CTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAG...GTTAACTCTAGCCCTGACCTCTATTGATCTTTTGGGAATGAGGGCTGATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCATGCTATAGCAAGACTTaGATACTCGACTGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSCYSKT*ILDWVQ
Trigger: TTGAACCCAGTCGAGTATGCAAGTCTTGCTATAGCA...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCATTGTGGGATGTAGGCTaGTATAGCAAGACTTGCATA +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSLWDVG*YSKTCI
Trigger: TATGCAAGTCTTGCTATAGCAGCCTACATCCCACAA...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAAAGGAAATGCGTTCAGTaGTTGAACATCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQRKCVQ*LNIMVR
Trigger: CCTCACCATGATGTTCAAGCACTGAACGCATTTCCT...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTGTTTTCAAACGCCTaGTGGGTGGCACTTACGGCT +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWLFSNA*WVALTA
Trigger: AGCCGTAAGTGCCACCCAGCAGGCGTTTGAAAACAA...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATGCCAGTGTTTTAATTTaGTGGAGACTAGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDASVLI*WRLAHR
Trigger: CCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGC...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACGATCCTCACTGCACCTaGTTCACCAGCATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYDPHCT*FTSILA
Trigger: AGCCAAGATGCTGGTGAAGCAGGTGCAGTGAGGATC...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACAGAGAAAATCTCTGTaGTGCAGCGAGACAAACAGT +
Preference number: 4 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQQRKSL*CSETNS
Trigger: ACTGTTTGTCTCGCTGCAGCACAGAGATTTTCTCTG...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401950.7
CDS-3UTR CCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTGGGAAAGATCTGATTaGCCTGGATGCACTCAAGGC +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGWERSD*PGCTQG
Trigger: GCCTTGAGTGCATCCAGGCCAATCAGATCTTTCCCA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCACAACTTCACAGTTTaGGTAATACTCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIHNFTV*VILWAF
Trigger: GAATGCCCAGAGTATTACCCAAACTGTGAAGTTGTG...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCACTCTCCTCTTTGGTaGCCTCCTGCAAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWHSPLW*PPARCS
Trigger: AGAACATCTTGCAGGAGGCCACCAAAGAGGAGAGTG...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTCTCCACTCTCCTCTTTaGTGGCCTCCTGCAAGATGT +
Preference number: 4 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTILHSPL*WPPARC
Trigger: ACATCTTGCAGGAGGCCACCAAAGAGGAGAGTGGAG...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATTCAATGCCTGCCCTGTaGGCAGGTTCCTCTACTCCA +
Preference number: 4 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDSMPAL*AGSSTP
Trigger: TGGAGTAGAGGAACCTGCCCACAGGGCAGGCATTGA...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTCAGCTCATATCCAGATaGCTCCTCAGAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWAQLISR*LLRAAS
Trigger: TGATGCTGCTCTGAGGAGCCATCTGGATATGAGCTG...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACTTCATATGCATCTACTGGGATTaGAAGAACTGCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LCVDTMAMAHTHGFHNFICIYWD*KNCFLP
Trigger: AGGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCA...TATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCGACTCTTCAGCTCCTaGACTTGTTTCTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHRLFSS*TCFFKV
Trigger: AACTTTGAAGAAACAAGTCCAGGAGCTGAAGAGTCG...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCGACTCTTCAGCTCCTaGACTTGTTTCTTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIRLFSS*TCFFKV
Trigger: AACTTTGAAGAAACAAGTCCAGGAGCTGAAGAGTCG...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCACTGAGCTTCAGTTaGAAGTGGCAGCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGSLSFS*KWQQWA
Trigger: AGCCCATTGCTGCCACTTCCAACTGAAGCTCAGTGA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCAATCTACAATCCAGTaGTGCATCCCAAATCTGTCA +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHQSTIQ*CIPNLS
Trigger: TGACAGATTTGGGATGCACCACTGGATTGTAGATTG...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCCATGGCACACACTCATaGTTTTCACAACTTCATATG +
Preference number: 4 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLHGTHS*FSQLHM
Trigger: CATATGAAGTTGTGAAAACCATGAGTGTGTGCCATG...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCTTTATTCAACTTAAATaGTCACCGAGGCTACAGCAG +
Preference number: 4 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLFIQLK*SPRLQQ
Trigger: CTGCTGTAGCCTCGGTGACCATTTAAGTTGAATAAA...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTCTGCACCTACGACACTaGATTATAGCACTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWALHLRH*IIALAG
Trigger: TCCTGCCAGTGCTATAATCCAGTGTCGTAGGTGCAG...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTTCAAGGAAAGGAACCTaGAGATTCTCATCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTISRKGT*RFSSSR
Trigger: CCGGGAGGATGAGAATCTTCAGGTTCCTTTCCTTGA...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAAATTGGAAAGGGCAATaGTGGCATCCTCGGCACGGC +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKNWKGQ*WHPRHG
Trigger: GCCGTGCCGAGGATGCCATCATTGCCCTTTCCAATT...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCTCTTCAGCCACTCTTaGCACTGCTCAAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWLFSHS*HCSKVE
Trigger: TTCAACCTTTGAGCAGTGTCAAGAGTGGCTGAAGAG...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAATCCGAGTTCTCCCCATaGCCACACCGGTCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKESEFSP*PHRSAN
Trigger: ATTTGCTGACCGGTGTGGTCATGGGGAGAACTCGGA...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCAAGGAATGCTTCATTaGACTCAAAAGAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHQGMLH*TQKSKE
Trigger: TTCCTTGCTCTTTTGAGTTCAATGAAGCATTCCTTG...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGAACATGTCCGTTCCTaGGTATGCTTTTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVEHVRS*VCFSPL
Trigger: GAGAGGGGAAAAGCATACTCAGGAACGGACATGTTC...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTTCATTTATCCATCTGTaGGGGGACTGGCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSIRPTFSLPARLDDTECSFIHL*GDWLSS
Trigger: GGAGCTGAGCCAGTCCCCTCACAGATGGATAAATGA...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTGCCAGGTCAGATCCCTaGCTGCTTTGCCCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: SSIRPTFSLPARLDDTECARSDP*LLCPLL
Trigger: TAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGC...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTAACATCAGGAATCCATaGACCCTGCCTCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGNIRNP*TLPLED
Trigger: ATCTTCCAGAGGCAGGGTTCATGGATTCCTGATGTT...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATACTGACTGTACCAGATaGTCATCATCTGCATTTCGC +
Preference number: 4 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDTDCTR*SSSAFR
Trigger: GCGAAATGCAGATGATGAGCATCTGGTACAGTCAGT...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTGTTTGCCACAGCAGCTaGATAGGAGCGTGCATCCAA +
Preference number: 4 (lower is better)
Translates to: SSIRPTFSLPARLDDTECVCHSS*IGACIQ
Trigger: TTGGATGCACGCTCCTATGCAGCTGCTGTGGCAAAC...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGACACAGTCAAGCCACTaGAGAAACACTGGGCAACGT +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVTQSSH*RNTGQR
Trigger: ACGTTGCCCAGTGTTTCTGCAGTGGCTTGACTGTGT...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTCAGTTTCACAAGGAATaGTTCATTGAACTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASQFHKE*FIELKR
Trigger: TCTTTTGAGTTCAATGAAGCATTCCTTGTGAAACTG...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACTCTGCTGTTCAGAAATaGCCTGTGAGAACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYSAVQK*PVRTEA
Trigger: GGCCTCTGTTCTCACAGGGCATTTCTGAACAGCAGA...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAAACCATAGCCAACTTTTaGATCTACTGGGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQTIANF*IYWDWK
Trigger: CTTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGT...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTGAGGTTGTGGGATGTAGGCTaGTATAGCAAGACTTGCATA +
Preference number: 4 (lower is better)
Translates to: IYRVPLPPNISLIYPSVRLWDVG*YSKTCI
Trigger: TATGCAAGTCTTGCTATAGCAGCCTACATCCCACAA...CCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGATGCCATTTACCGTGTaGCTCTCCCTCCAAACATCA +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWMPFTV*LSLQTS
Trigger: TGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATTCCCAGCCCCTCGCCTaGCTCAAAGGAGCATCCACT +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHSQPLA*LKGAST
Trigger: AGTGGATGCTCCTTTGAGGCAGGCGAGGGGCTGGGA...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCAAGACCTCTAGTTGACTaGATAACCCAATCACATCTA +
Preference number: 4 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSRPLVD*ITQSHL
Trigger: TAGATGTGATTGGGTTATGCAGTCAACTAGAGGTCT...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGAGAAAATCTCTGTGCTaGAGCGAGACAAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLRKSLC*SETNSS
Trigger: AGAACTGTTTGTCTCGCTGCAGCACAGAGATTTTCT...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS-3UTR GCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAACAATTCCTGCAGTGGTaGTTCCTGCTGGCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKQFLQW*FLLASQ
Trigger: CTGGCTTGCCAGCAGGAAGCACCACTGCAGGAATTG...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAAGTTGCTCTTTTTCACTaGCATAGACCTCCATGCACC +
Preference number: 4 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKVALFH*HRPPCT
Trigger: GGTGCATGGAGGTCTATGCCAGTGAAAAAGAGCAAC...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTCAGAGGCACAAGCTTTaGCTACTGACTGTACCAGAT +
Preference number: 4 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWAQRHKL*LLTVPD
Trigger: ATCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTG...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCAGAGGCACAAGCTTTaGCTACTGACTGTACCAGAT +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWQRHKL*LLTVPD
Trigger: ATCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTG...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCCACTGCAGAAACACTaGGCAACGTTCATTCAGATC +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWPLQKH*ATFIQI
Trigger: GATCTGAATGAACGTTGCCCAGTGTTTCTGCAGTGG...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTACCACTGCAGAAACACTaGGCAACGTTCATTCAGATC +
Preference number: 4 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLPLQKH*ATFIQI
Trigger: GATCTGAATGAACGTTGCCCAGTGTTTCTGCAGTGG...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGTTTCCCCTCTCTCCTTaGCGTTGTTGCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVFPLSP*RCCTGM
Trigger: CATTCCTGTGCAACAACGCCAAGGAGAGAGGGGAAA...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TTCAAATCAGCCCTCATTCCCAAAAGATCAATAGAGGTCAGGGCTAGAGTTAACTTGTCTCTGAAGGGCTaGGTTCCATGGTCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: FKSALIPKRSIEVRARVNLSLKG*VPWSEE
Trigger: TTCCTCAGACCATGGAACCCAGCCCTTCAGAGACAA...GTTAACTCTAGCCCTGACCTCTATTGATCTTTTGGGAATGAGGGCTGATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAAGTGGTGCTTCCTGCTaGCAAGCCAGAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKSGASC*QARRHC
Trigger: ACAGTGCCTTCTGGCTTGCCAGCAGGAAGCACCACT...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGGGAACTGGAACCTTCTaGTTACAACAACTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWGTGTF*LQQLEQ
Trigger: CTGCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCC...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACCAATGCTGGAGCTTGTaGGATGTAGGCTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYQCWSL*DVGCYS
Trigger: GCTATAGCAGCCTACATCCCACAAGCTCCAGCATTG...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCAAGGTCAATGCTaGAGCTTGTGGGATGTAGGC +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVVQGQC*SLWDVG
Trigger: GCCTACATCCCACAAGCTCCAGCATTGACCTTGAAC...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAATGGAAGTGGCAGCAATaGGCTTATCCAGTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKWKWQQ*AYPVQG
Trigger: ACCTTGAACTGGATAAGCCCATTGCTGCCACTTCCA...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAAGAGCCCAAGACAATCTaGGTCAAGTTAAAAATGGGA +
Preference number: 4 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQEPKTI*VKLKMG
Trigger: TCCCATTTTTAACTTGACCCAGATTGTCTTGGGCTC...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATTTATATGTACAGCTATaGAGAGTTACGGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHLYVQL*RVTVPP
Trigger: AGGAGGAACCGTAACTCTCCATAGCTGTACATATAA...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAAAGTGTTTTAATTTGCTaGAGACTAGCCCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQSVLIC*RLAHRN
Trigger: GTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACT...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TTCAAATCAGCCCTCATTCCCAAAAGATCAATAGAGGTCAGGGCTAGAGTTAACCTCTTCAGCCACTCTTaGCACTGCTCAAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: FKSALIPKRSIEVRARVNLFSHS*HCSKVE
Trigger: TTCAACCTTTGAGCAGTGTCAAGAGTGGCTGAAGAG...GTTAACTCTAGCCCTGACCTCTATTGATCTTTTGGGAATGAGGGCTGATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGCTCGTTTTTAAACCTTaGAGTTACATGCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWLVFKP*SYMLPW
Trigger: CCAGGGGAGCATGTAACTTCAAGGTTTAAAAACGAG...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR TCA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTACTCGTTTTTAAACCTTaGAGTTACATGCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLLVFKP*SYMLPW
Trigger: CCAGGGGAGCATGTAACTTCAAGGTTTAAAAACGAG...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATTTCAGAAATGCCCTGTaGGAACAGAGGCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDFRNAL*EQRPAH
Trigger: ATGAGCTGGCCTCTGTTCTCACAGGGCATTTCTGAA...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGGAACTAGTATTGAAGTaGCTAGATGCCACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWELVLK*LDATVL
Trigger: CAGGACTGTGGCATCTAGTCACTTCAATACTAGTTC...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAACCTAAGAGGCTGAGCTaGTTCATACCCTGCACCTAC +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKPKRLS*FIPCTY
Trigger: GTAGGTGCAGGGTATGAATCAGCTCAGCCTCTTAGG...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTGGCCCACAAACTCTGTaGTCTCTCCATGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTIGPQTL*SLHEVQ
Trigger: TTGAACTTCATGGAGAGAGCACAGAGTTTGTGGGCC...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTAACTGACTGTACCAGATaGTCATCATCTGCATTTCGC +
Preference number: 4 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLTDCTR*SSSAFR
Trigger: GCGAAATGCAGATGATGAGCATCTGGTACAGTCAGT...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCAAGATCAAAAGCTTCTaGGGTTGGATGGCTAAACTC +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFKIKSF*GWMAKL
Trigger: GAGTTTAGCCATCCAACCGCAGAAGCTTTTGATCTT...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGAGCTGCATAGGAGCGTaGATCCAAGATCAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWSCIGA*IQDQKL
Trigger: AAGCTTTTGATCTTGGATGCACGCTCCTATGCAGCT...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAAGTTTGCCACAGCAGCTaGATAGGAGCGTGCATCCAA +
Preference number: 4 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKEVCHSS*IGACIQ
Trigger: TTGGATGCACGCTCCTATGCAGCTGCTGTGGCAAAC...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp CTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACTTCATAACCATAGCCAACTTTTaGATCTACTGGGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: LCVDTMAMAHTHGFHNFITIANF*IYWDWK
Trigger: CTTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGT...TATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGAGGAAGCCTGTCCTTaGCACTATTTACAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVEEACP*HYLQGK
Trigger: CTTGCCTTGTAAATAGTGGCAAGGACAGGCTTCCTC...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTAAAGTTTCTACTTCCTaGTGGTGGCCTGACTCAATC +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGKVSTS*WWPDSI
Trigger: GATTGAGTCAGGCCACCAGCAGGAAGTAGAAACTTT...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAAAAAGTTTCTACTTCCTaGTGGTGGCCTGACTCAATC +
Preference number: 4 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKKVSTS*WWPDSI
Trigger: GATTGAGTCAGGCCACCAGCAGGAAGTAGAAACTTT...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCTGCTATAGCAAGACTTaGATACTCGACTGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFCYSKT*ILDWVQ
Trigger: TTGAACCCAGTCGAGTATGCAAGTCTTGCTATAGCA...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAAGGCACAAAACATGGATaGCAAGATTACAAAGCACAA +
Preference number: 4 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQGTKHG*QDYKAQ
Trigger: TTGTGCTTTGTAATCTTGGCATCCATGTTTTGTGCC...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACTCTCCCAGCCTCATGTaGAAGCAGGCAAGTATATCA +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYSPSLM*KQASIS
Trigger: TGATATACTTGCCTGCTTGCACATGAGGCTGGGAGA...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGAAAAGCTTCTGCGGTTaGATGGCTAAACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWKSFCG*MAKLSA
Trigger: AGCAGAGAGTTTAGCCATCCAACCGCAGAAGCTTTT...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGTTCCTTGAGTGTAAGTaGGCAGAGCTGCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVFLECK*AELQLI
Trigger: TATGAGCTGCAGCTCTGCCCACTTACACTCAAGGAA...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGCTATGCAGCCACTTGTaGTGCAAGTTCCTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVLCSHL*CKFLEC
Trigger: ACACTCAAGGAACTTGCACCACAAGTGGCTGCATAG...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAATCTGGTTACAACAACTaGAGCAGAATACGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKSGYNN*SRIRSH
Trigger: GTGGGAACGTATTCTGCTCCAGTTGTTGTAACCAGA...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCTGGTTACAACAACTaGAGCAGAATACGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGSGYNN*SRIRSH
Trigger: GTGGGAACGTATTCTGCTCCAGTTGTTGTAACCAGA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTCTGGTTACAACAACTaGAGCAGAATACGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWSGYNN*SRIRSH
Trigger: GTGGGAACGTATTCTGCTCCAGTTGTTGTAACCAGA...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACAGCTTCAGTTGGAAGTaGCAGCAATGGGCTTATCCA +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYSFSWK*QQWAYP
Trigger: TGGATAAGCCCATTGCTGCCACTTCCAACTGAAGCT...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp ATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTGAGGTTATATGTACAGCTATaGAGAGTTACGGTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IYRVPLPPNISLIYPSVRLYVQL*RVTVPP
Trigger: AGGAGGAACCGTAACTCTCCATAGCTGTACATATAA...CCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATCTGAGCAGGTCACTCTaGATCTTAGCCAACTCACCA +
Preference number: 4 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDLSRSL*ILANSP
Trigger: TGGTGAGTTGGCTAAGATCCAGAGTGACCTGCTCAG...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTTTTTCAAACGCCTGCTaGGTGGCACTTACGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SSIRPTFSLPARLDDTECFSNAC*VALTAF
Trigger: GAAAGCCGTAAGTGCCACCCAGCAGGCGTTTGAAAA...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTCATAGAGAATCTCAGTaGATTAAGGCAGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSHRESQ*IKAAVT
Trigger: AGTTACAGCTGCCTTAATCCACTGAGATTCTCTATG...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATAAGCAGGGAGGCTACTaGTATCTGCACACAACATGC +
Preference number: 4 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDKQGGY*YLHTTC
Trigger: GCATGTTGTGTGCAGATACCAGTAGCCTCCCTGCTT...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGCATGAACCCTGCCTCTaGAAGATAAATAGTGACCCC +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVHEPCL*KINSDP
Trigger: GGGGTCACTATTTATCTTCCAGAGGCAGGGTTCATG...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAAAGAAGTGTTCCTAGTTaGCAGCTTGCTGCCACTCGA +
Preference number: 4 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKERSVPS*QLAATR
Trigger: TCGAGTGGCAGCAAGCTGTCAACTAGGAACACTTCT...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATAGCACGGCTTCTGACTaGGAGGAATACAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDSTASD*EEYSRF
Trigger: AAACCTACTGTATTCCTCTCAGTCAGAAGCCGTGCT...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTGGCAGGCTTTGGCCTTaGCTGCATAAACATTTTGAC +
Preference number: 4 (lower is better)
Translates to: SSIRPTFSLPARLDDTECGRLWP*LHKHFD
Trigger: GTCAAAATGTTTATGCAGTCAAGGCCAAAGCCTGCC...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTACCTGCACGACTAGATaGCACAGAATGTGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTITCTTR*HRMWKR
Trigger: TCTTTTCCACATTCTGTGTCATCTAGTCGTGCAGGT...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTAAAGATCAAAAGCTTCTaGGGTTGGATGGCTAAACTC +
Preference number: 4 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLKIKSF*GWMAKL
Trigger: GAGTTTAGCCATCCAACCGCAGAAGCTTTTGATCTT...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTGCTATAGCAAGACTTaGATACTCGACTGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWCYSKT*ILDWVQ
Trigger: TTGAACCCAGTCGAGTATGCAAGTCTTGCTATAGCA...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGTCTACAATCCAGTGGTaGATCCCAAATCTGTCACTC +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVSTIQW*IPNLSL
Trigger: GAGTGACAGATTTGGGATGCACCACTGGATTGTAGA...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATTGCTCTTGGGGAATATaGTTCCAGCCTCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHCSWGI*FQPPQQ
Trigger: CTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCA...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGATTGAAGTGACTAGATaGCACAGTCCTGCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWIEVTR*HSPAVR
Trigger: TCTTACAGCAGGACTGTGGCATCTAGTCACTTCAAT...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAATCCATGCACCAAGCATaGTATGCAAATGAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKSMHQA*YANEKR
Trigger: TCTCTTCTCATTTGCATACCATGCTTGGTGCATGGA...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATAAAGGTCTCCCCCATTaGGAAAGTCTCGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDKGLPH*ESLEKC
Trigger: ACACTTCTCGAGACTTTCCCAATGGGGGAGACCTTT...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTCACAACTTCACAGTTTaGGTAATACTCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGHNFTV*VILWAF
Trigger: GAATGCCCAGAGTATTACCCAAACTGTGAAGTTGTG...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTTTCCTTGAGTGTAAGTaGGCAGAGCTGCAGCTCATA +
Preference number: 4 (lower is better)
Translates to: SSIRPTFSLPARLDDTECFLECK*AELQLI
Trigger: TATGAGCTGCAGCTCTGCCCACTTACACTCAAGGAA...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGTCTGGTTACAACAACTaGAGCAGAATACGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVSGYNN*SRIRSH
Trigger: GTGGGAACGTATTCTGCTCCAGTTGTTGTAACCAGA...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CCA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATGAAAGGCTGATTGTATaGGACCTGCTCCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDERLIV*DLLPFP
Trigger: TGGAAAAGGGAGCAGGTCCCATACAATCAGCCTTTC...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATCAAACGCCTGCTGGGTaGCACTTACGGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHQTPAG*HLRLSH
Trigger: GTGTGAAAGCCGTAAGTGCCACCCAGCAGGCGTTTG...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 72 bp TGTACATCAGACCCAAGAAACCCGTATCATAACCTCTaGGCACCTGTCACTAGGAAATGCACAATCTTCAAT +
Preference number: 4 (lower is better)
Translates to: CTSDPRNPYHNL*APVTRKCTIFN
Trigger: ATTGAAGATTGTGCATTTCCTAGTGACAGGTGCCAAGAGGTTATGATACGGGTTTCTTGGGTCTGATGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
3UTR CAA 72 bp TACGGCTTTCACACTAGAACCAGCTCAGCTGGCTCTTaGTGTTTGTATACTTTAGGTAGAAGGTACATTCAG +
Preference number: 4 (lower is better)
Translates to: YGFHTRTSSAGS*CLYTLGRRYIQ
Trigger: CTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGTGTGAAAGCCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTCTCCTCCGAATAGAATaGATGTTTGCCATCCCCATA +
Preference number: 4 (lower is better)
Translates to: SSIRPTFSLPARLDDTECLLRIE*MFAIPI
Trigger: TATGGGGATGGCAAACATTCATTCTATTCGGAGGAG...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp TTCAAATCAGCCCTCATTCCCAAAAGATCAATAGAGGTCAGGGCTAGAGTTAACTATAGGAGCACTGACTaGCTCCTCTTTAGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: FKSALIPKRSIEVRARVNYRSTD*LLFRRK
Trigger: TTTTCTCCTAAAGAGGAGTCAGTCAGTGCTCCTATA...GTTAACTCTAGCCCTGACCTCTATTGATCTTTTGGGAATGAGGGCTGATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATCCTAAGAGGCTGAGCTaGTTCATACCCTGCACCTAC +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHPKRLS*FIPCTY
Trigger: GTAGGTGCAGGGTATGAATCAGCTCAGCCTCTTAGG...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGTTGTGGGATGTAGGCTaGTATAGCAAGACTTGCATA +
Preference number: 4 (lower is better)
Translates to: KINLQSSGASQICHSVQVLWDVG*YSKTCI
Trigger: TATGCAAGTCTTGCTATAGCAGCCTACATCCCACAA...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR GCA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGAAATCACTGAGGAAATaGGTTCAGTGCTTGAACATC +
Preference number: 4 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWKSLRK*VQCLNI
Trigger: GATGTTCAAGCACTGAACGCATTTCCTCAGTGATTT...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTAAATCACTGAGGAAATaGGTTCAGTGCTTGAACATC +
Preference number: 4 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGKSLRK*VQCLNI
Trigger: GATGTTCAAGCACTGAACGCATTTCCTCAGTGATTT...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATGGAACAAGGCTTCAGTaGAGTTGTGTGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHGTRLQ*SCVLGT
Trigger: TGTCCCCAGCACACAACTGCACTGAAGCCTTGTTCC...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACGGAATCCATGAACCCTaGCTCTGGAAGATAAATAGT +
Preference number: 4 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYGIHEP*LWKINS
Trigger: ACTATTTATCTTCCAGAGGCAGGGTTCATGGATTCC...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAACCTGGAAACCCTCTATaGTTCGGTAATAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKEPGNPL*FGNKGP
Trigger: TGGACCCTTATTACCGAACCATAGAGGGTTTCCAGG...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAATGGAAGTGGCAGCAATaGGCTTATCCAGTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKWKWQQ*AYPVQG
Trigger: ACCTTGAACTGGATAAGCCCATTGCTGCCACTTCCA...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAAAACTGTGTTGCCACTaGAAGTCAGAGACGTGCTCA +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKKLCCH*KSETCS
Trigger: TGAGCACGTCTCTGACTTCCAGTGGCAACACAGTTT...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp TTCAAATCAGCCCTCATTCCCAAAAGATCAATAGAGGTCAGGGCTAGAGTTAACAGTGTTTTAATTTGCTaGAGACTAGCCCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: FKSALIPKRSIEVRARVNSVLIC*RLAHRN
Trigger: GTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACT...GTTAACTCTAGCCCTGACCTCTATTGATCTTTTGGGAATGAGGGCTGATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAACATAGAGAATCTCAGTaGATTAAGGCAGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKHRESQ*IKAAVT
Trigger: AGTTACAGCTGCCTTAATCCACTGAGATTCTCTATG...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACATTCAGAAAGTGACCTTCCTCCCTACCCTCTaGAATCTCTTCTATTCGAAA +
Preference number: 4 (lower is better)
Translates to: AGSLCLYTLGRRYIQKVTFLPTL*NLFYSK
Trigger: TTTCGAATAGAAGAGATTGCAGAGGGTAGGGAGGAA...GGTCACTTTCTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACATTCAGAAAGTGACCGGAAGTGTTAGCAAATaGTACCATGTGGAACACTCA +
Preference number: 4 (lower is better)
Translates to: AGSLCLYTLGRRYIQKVTGSVSK*YHVEHS
Trigger: TGAGTGTTCCACATGGTAGCATTTGCTAACACTTCC...GGTCACTTTCTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTAGGGATGCCCAACAGTaGTGTAGGGTAAAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: SSIRPTFSLPARLDDTECRDAQQ*CRVKKN
Trigger: ATTTTTCTTTACCCTACAGCACTGTTGGGCATCCCT...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATTTGCCCACAGAGAACTaGCTTTCTCCATATGCAGCC +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHLPTEN*LSPYAA
Trigger: GGCTGCATATGGAGAAAGGCAGTTCTCTGTGGGCAA...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATCACAACTTCACAGTTTaGGTAATACTCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDHNFTV*VILWAF
Trigger: GAATGCCCAGAGTATTACCCAAACTGTGAAGTTGTG...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATCAATGCTGGAGCTTGTaGGATGTAGGCTGCTATAGC +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHQCWSL*DVGCYS
Trigger: GCTATAGCAGCCTACATCCCACAAGCTCCAGCATTG...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATTCACTGAGCTTCAGTTaGAAGTGGCAGCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHSLSFS*KWQQWA
Trigger: AGCCCATTGCTGCCACTTCCAACTGAAGCTCAGTGA...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAATGATTGGTTTGGTTTaGGAACGGGGGATTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKMIGLV*ERGISG
Trigger: TCCAGAAATCCCCCGTTCCCAAACCAAACCAATCAT...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAACCAGGACCTGAAACTTaGTACACTTTCCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKEPGPET*YTFQFF
Trigger: AAAGAACTGGAAAGTGTATCAAGTTTCAGGTCCTGG...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAAGGAAGTGTTAGCAAATaGTACCATGTGGAACACTCA +
Preference number: 4 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKEGSVSK*YHVEHS
Trigger: TGAGTGTTCCACATGGTAGCATTTGCTAACACTTCC...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATTGCATCTACTGGGATTaGAAGAACTGCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHCIYWD*KNCFLP
Trigger: AGGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCA...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATCTATGCAGCCACTTGTaGTGCAAGTTCCTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHLCSHL*CKFLEC
Trigger: ACACTCAAGGAACTTGCACCACAAGTGGCTGCATAG...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
3UTR CAA 72 bp TTTCACACTAGAACCAGCTCAGCTGGCTCTTTGTGTTaGTATACTTTAGGTAGAAGGTACATTCAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: FHTRTSSAGSLC*YTLGRRYIQKV
Trigger: CACTTTCTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGTGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATAAGGAGACCTCTAGTTaGCTGCATAACCCAATCACA +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHKETSS*LHNPIT
Trigger: TGTGATTGGGTTATGCAGTCAACTAGAGGTCTCCTT...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR TCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATATCTGGTCCTGCCCTTaGGAAATCTTGTCAGTAATC +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHIWSCP*EILSVI
Trigger: GATTACTGACAAGATTTCTCAAGGGCAGGACCAGAT...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CCA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATTGGATTTCCCTGTGCTaGCTGAGGAAGAGATTGTTT +
Preference number: 4 (lower is better)
Translates to: NIPFISSTASEPHGLCFHWISLC*LRKRLF
Trigger: AAACAATCTCTTCCTCAGCCAGCACAGGGAAATCCA...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACATTCAGAAAGTGACCAATAGAATGAATGTTTaGCATCCCCATAAACACAAC +
Preference number: 4 (lower is better)
Translates to: AGSLCLYTLGRRYIQKVTNRMNV*HPHKHN
Trigger: GTTGTGTTTATGGGGATGGCAAACATTCATTCTATT...GGTCACTTTCTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp GCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACATTCAGAAAGTGACCCAGTTTCACAAGGAATaGTTCATTGAACTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: AGSLCLYTLGRRYIQKVTQFHKE*FIELKR
Trigger: TCTTTTGAGTTCAATGAAGCATTCCTTGTGAAACTG...GGTCACTTTCTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR GCA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAACAGTTTCACAAGGAATaGTTCATTGAACTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKQFHKE*FIELKR
Trigger: TCTTTTGAGTTCAATGAAGCATTCCTTGTGAAACTG...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS GCA 90 bp CCAGGGCCAGCCAGGCTGCTCAGCTCTAGTGAGCGCCGGTGCTCCTaGCACTTCTCGTTCAGGCTGGGGTCGCTGCAGCGCCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PGPARLLSSSERRCS*HFSFRLGSLQRRLA
Trigger: GGCCAGCCGGCGCTGCAGCGACCCCAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTCACTAGAGCTGAGCAGCCTGGCTGGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000492087.1
CDS-3UTR CAA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGCACCACAGACCCCACTaGGGGCCTCTCGACCAGGCT +
Preference number: 5 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWHHRPH*GPLDQA
Trigger: AGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGTG...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS CCA 90 bp GCCTGGGGCTGGGTATGGTGCACAGCTGTCGTCCACAGGGGTGGTTaGGGATGGGCAGGGCAGGTACACTGCACTCCACAGCATCAGGTT +
Preference number: 5 (lower is better)
Translates to: AWGWVWCTAVVHRGG*GWAGQVHCTPQHQV
Trigger: AACCTGATGCTGTGGAGTGCAGTGTACCTGCCCTGCCCATCCCCAACCACCCCTGTGGACGACAGCTGTGCACCATACCCAGCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000492087.1
CDS CCA 90 bp GCTCCTGCCACTTCTCGTTCAGGCTGGGGTCGCTGCAGCGCCGGCTaGCCAGAGGCACTGTGTTGTCACAGGCTGTGGTCAGATTGTCGT +
Preference number: 5 (lower is better)
Translates to: APATSRSGWGRCSAG*PEALCCHRLWSDCR
Trigger: ACGACAATCTGACCACAGCCTGTGACAACACAGTGCCTCTGGCCAGCCGGCGCTGCAGCGACCCCAGCCTGAACGAGAAGTGGCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000492087.1
CDS-3UTR CAA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGTCGCAGCCTCCTCCTTaGGCTCGGTTTGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVSQPPP*ARFATA
Trigger: TGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCGA...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGTCGCAGCCTCCTCCTTaGGCTCGGTTTGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGSQPPP*ARFATA
Trigger: TGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCGA...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCCTACCAGCCTCCCCATaGGCGCAATGCCCATTGGGT +
Preference number: 5 (lower is better)
Translates to: TLPFQSARASRSAQVEWALPASP*AQCPLG
Trigger: ACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTAG...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCATAGGAACAGCAGCTaGGCCACTGCCCACCCAGGT +
Preference number: 5 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVHRNSS*ATAHPG
Trigger: ACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTATG...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS CCA 90 bp GGCTGGGTATGGTGCACAGCTGTCGTCCACAGGGGTGGTTGGGGATaGGCAGGGCAGGTACACTGCACTCCACAGCATCAGGTTACGCAC +
Preference number: 5 (lower is better)
Translates to: GWVWCTAVVHRGGWG*AGQVHCTPQHQVTH
Trigger: GTGCGTAACCTGATGCTGTGGAGTGCAGTGTACCTGCCCTGCCCATCCCCAACCACCCCTGTGGACGACAGCTGTGCACCATACCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000492087.1
CDS CCA 90 bp TGCCATCATCGTCCAGGTGGCTGCGGGAAGGCTGGTCGGGGCTGCTaGTTGCAGATGGCCTTCCTGAGTGGCTATGCAGCCACTTGTGGT +
Preference number: 5 (lower is better)
Translates to: CHHRPGGCGKAGRGC*LQMAFLSGYAATCG
Trigger: ACCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCAACCAGCAGCCCCGACCAGCCTTCCCGCAGCCACCTGGACGATGATGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCTCGCAGCCTCCTCCTTaGGCTCGGTTTGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPSQPPP*ARFATA
Trigger: TGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCGA...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACGCCTCTCGACCAGGCTaGTCTCTGAAGGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNASRPG*SLKGWV
Trigger: AACCCAGCCCTTCAGAGACAAGCCTGGTCGAGAGGC...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTCACCACAGACCCCACTaGGGGCCTCTCGACCAGGCT +
Preference number: 5 (lower is better)
Translates to: SRSAQVEWACHRNSSLATHHRPH*GPLDQA
Trigger: AGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGTG...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 90 bp CGGCTCAGTGAGTCCTTGCTCCTACCAGCCTCCCCATTGGCGCAATaGCCATTGGGTGTGGGGTACATCTGGAGGGTGCTAAGACCTGGG +
Preference number: 5 (lower is better)
Translates to: RLSESLLLPASPLAQ*PLGVGYIWRVLRPG
Trigger: CCCAGGTCTTAGCACCCTCCAGATGTACCCCACACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 90 bp ACATGCCATCATCGTCCAGGTGGCTGCGGGAAGGCTGGTCGGGGCTaGTGGTTGCAGATGGCCTTCCTGAGTGGCTATGCAGCCACTTGT +
Preference number: 5 (lower is better)
Translates to: TCHHRPGGCGKAGRG*WLQMAFLSGYAATC
Trigger: ACAAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCAACCAGCAGCCCCGACCAGCCTTCCCGCAGCCACCTGGACGATGATGGCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 90 bp CAATCTGACGCAGGCGCTGTTGGATCGTGTCTGTGTACACTGACATaGCATCATCGTCCAGGTGGCTGCGGGAAGGCTGGTCGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: QSDAGAVGSCLCTLT*HHRPGGCGKAGRGC
Trigger: GCAGCCCCGACCAGCCTTCCCGCAGCCACCTGGACGATGATGGCATGTCAGTGTACACAGACACGATCCAACAGCGCCTGCGTCAGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGGGTGGTCGGATTGCGTaGTTCAGTCTCTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLGGRIA*FSLFSH
Trigger: GTGGCTGAAGAGACTGAACAACGCAATCCGACCACC...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGTTCCTAGTTGACAGCTaGCTGCCACTCGATCGGGAG +
Preference number: 5 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGFLVDS*LPLDRE
Trigger: CTCCCGATCGAGTGGCAGCAAGCTGTCAACTAGGAA...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTCTACCAGCCTCCCCATaGGCGCAATGCCCATTGGGT +
Preference number: 5 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPLPASP*AQCPLG
Trigger: ACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTAG...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGACGGCTCAGTGAGTCCTaGCTCCTACCAGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SRSQISILLALTTILPPGRLSES*LLPASP
Trigger: TGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCCG...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGCTGACGCAGGCGCTGTaGGATCGTGTCTGTGTACAC +
Preference number: 5 (lower is better)
Translates to: GSTLPFQSARASRSAQVELTQAL*DRVCVH
Trigger: GTGTACACAGACACGATCCAACAGCGCCTGCGTCAG...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCTCGGTCTGCCCAGGTaGAGTGGGCCTGTCATAGGA +
Preference number: 5 (lower is better)
Translates to: CTGGSTLPFQSARASRSALGLPR*SGPVIG
Trigger: TCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACGGGCAATTCCTTGCCTaGGATCCTCACTGCACCTGC +
Preference number: 5 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNGQFLA*DPHCTC
Trigger: GCAGGTGCAGTGAGGATCCAAGGCAAGGAATTGCCC...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGCCTCAGGGCAATTCCTaGCCTTGGATCCTCACTGCA +
Preference number: 5 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLPQGNS*PWILTA
Trigger: TGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGAGG...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS GCA 90 bp GTTACTGACAGGAGATGGGCCATCCAGCTGGAGCCAGCAGAGCCATaGTGGGGGCAGCAAGAGTCACAAGGACCACATCAGCTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: VTDRRWAIQLEPAEP*WGQQESQGPHQLQW
Trigger: CCACTGGAGCTGATGTGGTCCTTGTGACTCTTGCTGCCCCCAGCATGGCTCTGCTGGCTCCAGCTGGATGGCCCATCTCCTGTCAGTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491251.1
CDS CCA 90 bp CTGAGAGTGCTGCCAAGGGAAGTCCTATGCACCACAGACCCCACTTaGGGCCTCTCGACCAGGCTTGTCTCTGAAGGGCTGGGTTCCATG +
Preference number: 5 (lower is better)
Translates to: LRVLPREVLCTTDPT*GLSTRLVSEGLGSM
Trigger: CATGGAACCCAGCCCTTCAGAGACAAGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGTGCATAGGACTTCCCTTGGCAGCACTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTaGCCACTGCCCACCCAGGTCACTGAGCTTCAGTTGGAAGTGGCA +
Preference number: 5 (lower is better)
Translates to: LGLPRLSGPVIGTAA*PLPTQVTELQLEVA
Trigger: TGCCACTTCCAACTGAAGCTCAGTGACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS-3UTR CAA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGGTGGTCGGATTGCGTaGTTCAGTCTCTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GGSTLPFQSARASRSAQVGGRIA*FSLFSH
Trigger: GTGGCTGAAGAGACTGAACAACGCAATCCGACCACC...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGGAAAGGTCTCCCCCATaGGGAAAGTCTCGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRERSPP*GKSREV
Trigger: CACTTCTCGAGACTTTCCCAATGGGGGAGACCTTTC...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTCTCCTTTGGCTCGGTTaGCCACAGCAGCTGCATAGG +
Preference number: 5 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPLLWLG*PQQLHR
Trigger: CCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGAG...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCTCCTTTGGCTCGGTTaGCCACAGCAGCTGCATAGG +
Preference number: 5 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLLLWLG*PQQLHR
Trigger: CCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGAG...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTTCGCAGCCTCCTCCTTaGGCTCGGTTTGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: SRSAQVEWACHRNSSLATSQPPP*ARFATA
Trigger: TGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCGA...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCGCAGCCTCCTCCTTaGGCTCGGTTTGCCACAGCA +
Preference number: 5 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSSQPPP*ARFATA
Trigger: TGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCGA...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTACTCCACTCTCCTCTTaGGTGGCCTCCTGCAAGATG +
Preference number: 5 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGTPLSS*VASCKM
Trigger: CATCTTGCAGGAGGCCACCAAAGAGGAGAGTGGAGT...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGACTCCACTCTCCTCTTaGGTGGCCTCCTGCAAGATG +
Preference number: 5 (lower is better)
Translates to: GSTLPFQSARASRSAQVETPLSS*VASCKM
Trigger: CATCTTGCAGGAGGCCACCAAAGAGGAGAGTGGAGT...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCCACCACAGACCCCACTaGGGGCCTCTCGACCAGGCT +
Preference number: 5 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCHHRPH*GPLDQA
Trigger: AGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGTG...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTCTGACGCAGGCGCTGTaGGATCGTGTCTGTGTACAC +
Preference number: 5 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGLTQAL*DRVCVH
Trigger: GTGTACACAGACACGATCCAACAGCGCCTGCGTCAG...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCTGACGCAGGCGCTGTaGGATCGTGTCTGTGTACAC +
Preference number: 5 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSLTQAL*DRVCVH
Trigger: GTGTACACAGACACGATCCAACAGCGCCTGCGTCAG...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCCATAGGAACAGCAGCTaGGCCACTGCCCACCCAGGT +
Preference number: 5 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSHRNSS*ATAHPG
Trigger: ACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTATG...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTCATAGGAACAGCAGCTaGGCCACTGCCCACCCAGGT +
Preference number: 5 (lower is better)
Translates to: SRSAQVEWACHRNSSLATHRNSS*ATAHPG
Trigger: ACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTATG...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTCAGATGCTCTGGGCTTaGCCTGGACTGAGAGCACCA +
Preference number: 5 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPQMLWA*PGLRAP
Trigger: TGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTG...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS GCA 90 bp GGCTGGTCGGGGCTGCTGGTTGCAGATGGCCTTCCTGAGTGGCTATaGAGCCACTTGTGGTGCAAGTTCCTTGAGTGTAAGTGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GWSGLLVADGLPEWL*SHLWCKFLECKWAE
Trigger: CTCTGCCCACTTACACTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCAACCAGCAGCCCCGACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTCTCCTTTGGCTCGGTTaGCCACAGCAGCTGCATAGG +
Preference number: 5 (lower is better)
Translates to: SRSAQVEWACHRNSSLATLLWLG*PQQLHR
Trigger: CCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGAG...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCCTCTCCTTGGCGTTGTaGCACAGGAATGTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: TLPFQSARASRSAQVEWALSLAL*HRNVPN
Trigger: GTTTGGAACATTCCTGTGCAACAACGCCAAGGAGAG...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCCCTCTCTCCTTGGCGTaGTTGCACAGGAATGTTCCA +
Preference number: 5 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPPLSLA*LHRNVP
Trigger: TGGAACATTCCTGTGCAACAACGCCAAGGAGAGAGG...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGACTCCACTCTCCTCTTaGGTGGCCTCCTGCAAGATG +
Preference number: 5 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLTPLSS*VASCKM
Trigger: CATCTTGCAGGAGGCCACCAAAGAGGAGAGTGGAGT...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGTTGCATCTACTGGGATaGGAAGAACTGCTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGLHLLG*EELLPP
Trigger: GGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCAA...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCAGCCTCTCGACCAGGCTaGTCTCTGAAGGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTAASRPG*SLKGWV
Trigger: AACCCAGCCCTTCAGAGACAAGCCTGGTCGAGAGGC...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTCACCACAGACCCCACTaGGGGCCTCTCGACCAGGCT +
Preference number: 5 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASHHRPH*GPLDQA
Trigger: AGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGTG...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGCGGCTCAGTGAGTCCTaGCTCCTACCAGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKRLSES*LLPASP
Trigger: TGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCCG...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCTGTGGTGCAAGTTCCTaGAGTGTAAGTGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPCGASS*SVSGQS
Trigger: GCTCTGCCCACTTACACTCAAGGAACTTGCACCACA...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCTGGCTATGCAGCCACTaGTGGTGCAAGTTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPWLCSH*WCKFLE
Trigger: CTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCA...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCGGTCAATGCTGGAGCTaGTGGGATGTAGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPGQCWS*WDVGCY
Trigger: ATAGCAGCCTACATCCCACAAGCTCCAGCATTGACC...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCGGTCAATGCTGGAGCTaGTGGGATGTAGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTGQCWS*WDVGCY
Trigger: ATAGCAGCCTACATCCCACAAGCTCCAGCATTGACC...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp AGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGGGGAATATGCTAAGGCTTCAGTGCAGTaGTGTGCTGGGGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: SSSQEGDDAQGSALGEYAKASVQ*CAGDSR
Trigger: CCTGCTGTCCCCAGCACACAACTGCACTGAAGCCTT...AGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS TCA 90 bp TCCAGATGGCTCCTCAGAGCAGCATCACCCAGTTCTGGGTCTTGGTaGAGTCCAATGGCTGAGGCCTCAGGTGTCTTCCTCCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SRWLLRAASPSSGSW*SPMAEASGVFLLLS
Trigger: GGAGAGCAGGAGGAAGACACCTGAGGCCTCAGCCATTGGACTTCACCAAGACCCAGAACTGGGTGATGCTGCTCTGAGGAGCCATCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 90 bp TTCCTTGAGTGTAAGTGGGCAGAGCTGCAGCTCATAGCAGACAGCTaGCGGCTCAGTGAGTCCTTGCTCCTACCAGCCTCCCCATTGGCG +
Preference number: 5 (lower is better)
Translates to: FLECKWAELQLIADS*RLSESLLLPASPLA
Trigger: CGCCAATGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCCGTCAGCTGTCTGCTATGAGCTGCAGCTCTGCCCACTTACACTCAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp AAAACAGATGGGACCAGGTTACTGACAGGAGATGGGCCATCCAGCTaGAGCCAGCAGAGCCATGCTGGGGGCAGCAAGAGTCACAAGGAC +
Preference number: 5 (lower is better)
Translates to: KTDGTRLLTGDGPSS*SQQSHAGGSKSHKD
Trigger: GTCCTTGTGACTCTTGCTGCCCCCAGCATGGCTCTGCTGGCTCCAGCTGGATGGCCCATCTCCTGTCAGTAACCTGGTCCCATCTGTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491251.1
CDS-3UTR CAA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTCCTCTCTCCTTGGCGTaGTTGCACAGGAATGTTCCA +
Preference number: 5 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGPLSLA*LHRNVP
Trigger: TGGAACATTCCTGTGCAACAACGCCAAGGAGAGAGG...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGTTTTTGAAAGCCTTGTaGCCTGCCCGAAGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGFLKAL*PARRSD
Trigger: GTCACTTCTTCGGGCAGGCAACAAGGCTTTCAAAAA...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTTGCATCTACTGGGATaGGAAGAACTGCTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWLHLLG*EELLPP
Trigger: GGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCAA...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGGCCTCTCGACCAGGCTaGTCTCTGAAGGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKASRPG*SLKGWV
Trigger: AACCCAGCCCTTCAGAGACAAGCCTGGTCGAGAGGC...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CACCATCCTCCCACCCGGAAGAAACAAGCCATCCCTCAGTGTCACGTGACAGCATTGGCGCAATGCCCATaGGGTGTGGGGTACATCTGG +
Preference number: 5 (lower is better)
Translates to: HHPPTRKKQAIPQCHVTALAQCP*GVGYIW
Trigger: CCAGATGTACCCCACACCCAATGGGCATTGCGCCAA...TGCTGTCACGTGACACTGAGGGATGGCTTGTTTCTTCCGGGTGGGAGGATGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCTGTGGTGCAAGTTCCTaGAGTGTAAGTGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: SDALGFAWTESTREAFWACGASS*SVSGQS
Trigger: GCTCTGCCCACTTACACTCAAGGAACTTGCACCACA...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCTGGCTATGCAGCCACTaGTGGTGCAAGTTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: CTGGSTLPFQSARASRSAWLCSH*WCKFLE
Trigger: CTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCA...GGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCCTGACGCAGGCGCTGTaGGATCGTGTCTGTGTACAC +
Preference number: 5 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLLTQAL*DRVCVH
Trigger: GTGTACACAGACACGATCCAACAGCGCCTGCGTCAG...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCCCCACAATTCCACGTTaGATCAACACGGTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPPTIPR*INTVSV
Trigger: GACACTGACCGTGTTGATCAAACGTGGAATTGTGGG...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTTGGCGTGAGGAATGGTaGCATGTTAGCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: GGSTLPFQSARASRSAQVWREEW*HVSTGF
Trigger: AAAGCCAGTGCTAACATGCAACCATTCCTCACGCCA...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCTGGCGTGAGGAATGGTaGCATGTTAGCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPWREEW*HVSTGF
Trigger: AAAGCCAGTGCTAACATGCAACCATTCCTCACGCCA...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCAGACACACCTTGCCCTaGGTCAGGGAACTGCTACCA +
Preference number: 5 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSRHTLP*VRELLP
Trigger: TGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCT...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTAGATCCCTGACTGCTTaGCCCTCTTTTAGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSRSLTA*PSFSLG
Trigger: TCCCAGGCTAAAAGAGGGCAAAGCAGTCAGGGATCT...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGTGCTTCACCAGCATCTaGGCTCTTCATCTCCCTACC +
Preference number: 5 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLCFTSI*ALHLPT
Trigger: GGTAGGGAGATGAAGAGCCAAGATGCTGGTGAAGCA...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS CCA 90 bp AAGAGAGGGTCCTCTTTACCCTCCTGTATCTCAATGCCTGCCCTGTaGGCAGGTTCCTCTACTCCACTCTCCTCTTTGGTGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: KRGSSLPSCISMPAL*AGSSTPLSSLVASC
Trigger: GCAGGAGGCCACCAAAGAGGAGAGTGGAGTAGAGGAACCTGCCCACAGGGCAGGCATTGAGATACAGGAGGGTAAAGAGGACCCTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp CAGACCCCACTTGGGGCCTCTCGACCAGGCTTGTCTCTGAAGGGCTaGGTTCCATGGTCTGAGGAAGCCTGTCCTTGCCACTATTTACAA +
Preference number: 5 (lower is better)
Translates to: QTPLGASRPGLSLKG*VPWSEEACPCHYLQ
Trigger: TTGTAAATAGTGGCAAGGACAGGCTTCCTCAGACCATGGAACCCAGCCCTTCAGAGACAAGCCTGGTCGAGAGGCCCCAAGTGGGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGCACAGGTCTCCATGTaGCTCTTTTTCACTGGCATA +
Preference number: 5 (lower is better)
Translates to: GGSTLPFQSARASRSAQVAQVSM*LFFTGI
Trigger: TATGCCAGTGAAAAAGAGCAACATGGAGACCTGTGC...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTACTTCTCATTGATGTaGGAAATCCTCCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRYFSLM*EILQAL
Trigger: CAACGCCTGGAGGATTTCCAACATCAATGAGAAGTA...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGTACTTCTCATTGATGTaGGAAATCCTCCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: GTGSAPRRREMMPRAVLLYFSLM*EILQAL
Trigger: CAACGCCTGGAGGATTTCCAACATCAATGAGAAGTA...CAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTTCCTAGTTGACAGCTaGCTGCCACTCGATCGGGAG +
Preference number: 5 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLFLVDS*LPLDRE
Trigger: CTCCCGATCGAGTGGCAGCAAGCTGTCAACTAGGAA...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCGAAAGGTCTCCCCCATaGGGAAAGTCTCGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSERSPP*GKSREV
Trigger: CACTTCTCGAGACTTTCCCAATGGGGGAGACCTTTC...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCTGCTCCTGAAGCATTaGACAGAGAAGAATCGAACT +
Preference number: 5 (lower is better)
Translates to: PRSHSKVHGPLGLPRLSGLLLKH*TEKNRT
Trigger: AGTTCGATTCTTCTCTGTCAAATGCTTCAGGAGCAG...CCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp AAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTCTCCTTTGGCTCGGTTaGCCACAGCAGCTGCATAGG +
Preference number: 5 (lower is better)
Translates to: KGSQPALMWRWREEWLHVLLWLG*PQQLHR
Trigger: CCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGAG...AACATGCAACCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGCTCTCCTTGGCGTTGTaGCACAGGAATGTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: DQSVLMPEGGKCYTAWPRLSLAL*HRNVPN
Trigger: GTTTGGAACATTCCTGTGCAACAACGCCAAGGAGAG...CCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTCTCTCCTTGGCGTTGTaGCACAGGAATGTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPLSLAL*HRNVPN
Trigger: GTTTGGAACATTCCTGTGCAACAACGCCAAGGAGAG...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCCCTGTGCTGGCTGAGGAAGAGATTGTTTAGGGGACCAGGCCCCAGAATGGGGCCTCTCTCCTTGGCGTaGTTGCACAGGAATGTTCCA +
Preference number: 5 (lower is better)
Translates to: SLCWLRKRLFRGPGPRMGPLSLA*LHRNVP
Trigger: TGGAACATTCCTGTGCAACAACGCCAAGGAGAGAGG...CCCCATTCTGGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCAGCACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGGGCCGAATACAGTAGGTTTTaGAAAGCCTTGTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: TLPFQSARASRSAQVEWAEYSRF*KALLPA
Trigger: GGCAGGCAACAAGGCTTTCAAAAACCTACTGTATTC...GGCCCACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCAGGCTGTGGTCAGATaGTCGTATGATCTAGTCTTT +
Preference number: 5 (lower is better)
Translates to: CEGTGSAPRRREMMPRAVQAVVR*SYDLVF
Trigger: AAAGACTAGATCATACGACAATCTGACCACAGCCTG...CACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGCAGGCTGTGGTCAGATaGTCGTATGATCTAGTCTTT +
Preference number: 5 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRQAVVR*SYDLVF
Trigger: AAAGACTAGATCATACGACAATCTGACCACAGCCTG...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAACTCCACTCTCCTCTTaGGTGGCCTCCTGCAAGATG +
Preference number: 5 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGTPLSS*VASCKM
Trigger: CATCTTGCAGGAGGCCACCAAAGAGGAGAGTGGAGT...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCTTGCATCTACTGGGATaGGAAGAACTGCTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: SDALGFAWTESTREAFWALHLLG*EELLPP
Trigger: GGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCAA...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCTTGCATCTACTGGGATaGGAAGAACTGCTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCLHLLG*EELLPP
Trigger: GGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCAA...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCTTGGCGCAATGCCCATaGGGTGTGGGGTACATCTGG +
Preference number: 5 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCLAQCP*GVGYIW
Trigger: CCAGATGTACCCCACACCCAATGGGCATTGCGCCAA...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTTTGGCGCAATGCCCATaGGGTGTGGGGTACATCTGG +
Preference number: 5 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPLAQCP*GVGYIW
Trigger: CCAGATGTACCCCACACCCAATGGGCATTGCGCCAA...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTGACGCAGGCGCTGTaGGATCGTGTCTGTGTACAC +
Preference number: 5 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPLTQAL*DRVCVH
Trigger: GTGTACACAGACACGATCCAACAGCGCCTGCGTCAG...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACACATAGGAACAGCAGCTaGGCCACTGCCCACCCAGGT +
Preference number: 5 (lower is better)
Translates to: ETHLALGQGTATKGKRNTHRNSS*ATAHPG
Trigger: ACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTATG...TGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTAGATCCATGATTGGTTaGGTTTGGGAACGGGGGATT +
Preference number: 5 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGRSMIG*VWERGI
Trigger: AATCCCCCGTTCCCAAACCAAACCAATCATGGATCT...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGAGATCCATGATTGGTTaGGTTTGGGAACGGGGGATT +
Preference number: 5 (lower is better)
Translates to: GSTLPFQSARASRSAQVERSMIG*VWERGI
Trigger: AATCCCCCGTTCCCAAACCAAACCAATCATGGATCT...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTGCTAAAAATGGAGCCTaGAGGCGAGAGGTAGTTGTA +
Preference number: 5 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGAKNGA*RREVVV
Trigger: TACAACTACCTCTCGCCTCAAGGCTCCATTTTTAGC...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CCCTCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACTGCCAGTGTTTTAATTaGCTGGAGACTAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: PSVSRDSRQLGSYSGPGNCQCFN*LETSPQ
Trigger: CTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCA...GTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGGGGAATATGCTTTTCCGAGTCGGGGATaGAAGTCACCTCATCCCCAA +
Preference number: 5 (lower is better)
Translates to: SSSQEGDDAQGSALGEYAFPSRG*KSPHPQ
Trigger: TTGGGGATGAGGTGACTTCAATCCCCGACTCGGAAA...AGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS GCA 90 bp TGGGCATTCGCAGCCTCCTCCTTTGGCTCGGTTTGCCACAGCAGCTaGATAGGAGCGTGCATCCAAGATCAAAAGCTTCTGCGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: WAFAASSFGSVCHSS*IGACIQDQKLLRLD
Trigger: ATCCAACCGCAGAAGCTTTTGATCTTGGATGCACGCTCCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCGAATGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp CTTGGGGCCTCTCGACCAGGCTTGTCTCTGAAGGGCTGGGTTCCATaGTCTGAGGAAGCCTGTCCTTGCCACTATTTACAAGGCAAGATC +
Preference number: 5 (lower is better)
Translates to: LGASRPGLSLKGWVP*SEEACPCHYLQGKI
Trigger: GATCTTGCCTTGTAAATAGTGGCAAGGACAGGCTTCCTCAGACCATGGAACCCAGCCCTTCAGAGACAAGCCTGGTCGAGAGGCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp CAGCTTGGCCACTGCCCACCCAGGTCACTGAGCTTCAGTTGGAAGTaGCAGCAATGGGCTTATCCAGTTCAAGGTCAATGCTGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: QLGHCPPRSLSFSWK*QQWAYPVQGQCWSL
Trigger: CAAGCTCCAGCATTGACCTTGAACTGGATAAGCCCATTGCTGCCACTTCCAACTGAAGCTCAGTGACCTGGGTGGGCAGTGGCCAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS-3UTR CAA 90 bp CTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGGCACAGGTCTCCATGTaGCTCTTTTTCACTGGCATA +
Preference number: 5 (lower is better)
Translates to: LGLPRLSGPVIGTAAWPLAQVSM*LFFTGI
Trigger: TATGCCAGTGAAAAAGAGCAACATGGAGACCTGTGC...CAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGCACAGGTCTCCATGTaGCTCTTTTTCACTGGCATA +
Preference number: 5 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSAQVSM*LFFTGI
Trigger: TATGCCAGTGAAAAAGAGCAACATGGAGACCTGTGC...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGCTGCTCCTGAAGCATTaGACAGAGAAGAATCGAACT +
Preference number: 5 (lower is better)
Translates to: GSTLPFQSARASRSAQVELLLKH*TEKNRT
Trigger: AGTTCGATTCTTCTCTGTCAAATGCTTCAGGAGCAG...CTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGACACAACTTCACAGTTaGGGTAATACTCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRTQLHS*GNTLGI
Trigger: AATGCCCAGAGTATTACCCAAACTGTGAAGTTGTGT...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTTTTTTGAAAGCCTTGTaGCCTGCCCGAAGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGFLKAL*PARRSD
Trigger: GTCACTTCTTCGGGCAGGCAACAAGGCTTTCAAAAA...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTGAATACAGTAGGTTTTaGAAAGCCTTGTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: RWFHAPIPKCTGLSVCPGEYSRF*KALLPA
Trigger: GGCAGGCAACAAGGCTTTCAAAAACCTACTGTATTC...ACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCCAGGCTGTGGTCAGATaGTCGTATGATCTAGTCTTT +
Preference number: 5 (lower is better)
Translates to: VQVVPRSHSKVHGPLGLPQAVVR*SYDLVF
Trigger: AAAGACTAGATCATACGACAATCTGACCACAGCCTG...GGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAGCCTCTCGACCAGGCTaGTCTCTGAAGGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPASRPG*SLKGWV
Trigger: AACCCAGCCCTTCAGAGACAAGCCTGGTCGAGAGGC...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGCTACCAGCCTCCCCATaGGCGCAATGCCCATTGGGT +
Preference number: 5 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKLPASP*AQCPLG
Trigger: ACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTAG...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCGGCTCAGTGAGTCCTaGCTCCTACCAGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHRLSES*LLPASP
Trigger: TGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCCG...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTTGGCTATGCAGCCACTaGTGGTGCAAGTTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: LSLCTGGSTLPFQSARASWLCSH*WCKFLE
Trigger: CTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCA...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGGCAGGGTCAATGCTGGAGCTaGTGGGATGTAGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: HLALGQGTATKGKRNTGQGQCWS*WDVGCY
Trigger: ATAGCAGCCTACATCCCACAAGCTCCAGCATTGACC...CTGCCCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCGGAAAGTTTCCTTTTTaGAAGGCAGAGGAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTGKFPF*KAEEED
Trigger: ATCCTCCTCCTCTGCCTTCAAAAAAGGAAACTTTCC...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCACCAAGTGGCCCTTCACTGTGGCTGAGGAAGAGATaGTTTAGGGGACCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: GHVTSLRNPTKSPSGPSLWLRKR*FRGPGP
Trigger: GGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCA...CAGTGAAGGGCCACTTGGTGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCCATGATTGGTTTGGTTaGGGAACGGGGGATTTCTGG +
Preference number: 5 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSHDWFG*GTGDFW
Trigger: CCAGAAATCCCCCGTTCCCAAACCAAACCAATCATG...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTAGATCCATGATTGGTTaGGTTTGGGAACGGGGGATT +
Preference number: 5 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGRSMIG*VWERGI
Trigger: AATCCCCCGTTCCCAAACCAAACCAATCATGGATCT...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATGTGGCGGTGGCGTGAGGAATGGTTGCATGTTAGCACTGGCTTTCTTCCCTGCAGACACACCTTGCCCTaGGTCAGGGAACTGCTACCA +
Preference number: 5 (lower is better)
Translates to: MWRWREEWLHVSTGFLPCRHTLP*VRELLP
Trigger: TGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCT...GCAGGGAAGAAAGCCAGTGCTAACATGCAACCATTCCTCACGCCACCGCCACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTTTCCTGAGACACACCTaGCCCTTGGTCAGGGAACTG +
Preference number: 5 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPFLRHT*PLVREL
Trigger: CAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAA...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGTTCCTGAGACACACCTaGCCCTTGGTCAGGGAACTG +
Preference number: 5 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKFLRHT*PLVREL
Trigger: CAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAA...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ACGTGCTCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCCACGTTCAAACTGTGTaGCCACTGGAAGTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: TCSDALGFAWTESTREAFHVQTV*PLEVRD
Trigger: GTCTCTGACTTCCAGTGGCAACACAGTTTGAACGTG...GAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGAGCACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTCACGTTCAAACTGTGTaGCCACTGGAAGTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: SRSAQVEWACHRNSSLATHVQTV*PLEVRD
Trigger: GTCTCTGACTTCCAGTGGCAACACAGTTTGAACGTG...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTATCTGGTCCTGCCCTaGAGAAATCTTGTCAGTAAT +
Preference number: 5 (lower is better)
Translates to: QVVPRSHSKVHGPLGLPRYLVLP*RNLVSN
Trigger: ATTACTGACAAGATTTCTCAAGGGCAGGACCAGATA...CCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS TCA 90 bp CTTTACATTCGGCTAAAGGCAAGGCACAAGGGGAACGTGTCAGGCTaGGAGTGCTGCCAAGGGAAGTCCTATGCACCACAGACCCCACTT +
Preference number: 5 (lower is better)
Translates to: LYIRLKARHKGNVSG*ECCQGKSYAPQTPL
Trigger: AAGTGGGGTCTGTGGTGCATAGGACTTCCCTTGGCAGCACTCTCAGCCTGACACGTTCCCCTTGTGCCTTGCCTTTAGCCGAATGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 90 bp CTGGTTGCAGATGGCCTTCCTGAGTGGCTATGCAGCCACTTGTGGTaGAAGTTCCTTGAGTGTAAGTGGGCAGAGCTGCAGCTCATAGCA +
Preference number: 5 (lower is better)
Translates to: LVADGLPEWLCSHLW*KFLECKWAELQLIA
Trigger: TGCTATGAGCTGCAGCTCTGCCCACTTACACTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp CTGCTGGTTGCAGATGGCCTTCCTGAGTGGCTATGCAGCCACTTGTaGTGCAAGTTCCTTGAGTGTAAGTGGGCAGAGCTGCAGCTCATA +
Preference number: 5 (lower is better)
Translates to: LLVADGLPEWLCSHL*CKFLECKWAELQLI
Trigger: TATGAGCTGCAGCTCTGCCCACTTACACTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCAACCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCGAAATCCTCCAGGCGTaGTTCATATCAAAACCCATC +
Preference number: 5 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCEILQA*FISKPI
Trigger: GATGGGTTTTGATATGAACAACGCCTGGAGGATTTC...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTACTTCTCATTGATGTaGGAAATCCTCCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPYFSLM*EILQAL
Trigger: CAACGCCTGGAGGATTTCCAACATCAATGAGAAGTA...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACTCAGAGGCACAAGCTTaGGCTACTGACTGTACCAGA +
Preference number: 5 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNSEAQA*ATDCTR
Trigger: TCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTGA...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTTCAGAGGCACAAGCTTaGGCTACTGACTGTACCAGA +
Preference number: 5 (lower is better)
Translates to: LSLCTGGSTLPFQSARASSEAQA*ATDCTR
Trigger: TCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTGA...AGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTGAAAGGTCTCCCCCATaGGGAAAGTCTCGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPERSPP*GKSREV
Trigger: CACTTCTCGAGACTTTCCCAATGGGGGAGACCTTTC...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTAGTGATGGAGCCATTTaGTGCTTTCAAGAGCTGATA +
Preference number: 5 (lower is better)
Translates to: GGSTLPFQSARASRSAQVSDGAI*CFQELI
Trigger: TATCAGCTCTTGAAAGCACAAAATGGCTCCATCACT...AACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCAGTGATGGAGCCATTTaGTGCTTTCAAGAGCTGATA +
Preference number: 5 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPSDGAI*CFQELI
Trigger: TATCAGCTCTTGAAAGCACAAAATGGCTCCATCACT...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTACCATAGCCAACTTTaGCATCTACTGGGATTGGAA +
Preference number: 5 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWYHSQL*HLLGLE
Trigger: TTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGTA...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAACTTCATACACCACAGACCCCACTaGGGGCCTCTCGACCAGGCT +
Preference number: 5 (lower is better)
Translates to: LCVDTMAMAHTHGFHNFIHHRPH*GPLDQA
Trigger: AGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGTG...TATGAAGTTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCTTGGCGCAATGCCCATaGGGTGTGGGGTACATCTGG +
Preference number: 5 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLLAQCP*GVGYIW
Trigger: CCAGATGTACCCCACACCCAATGGGCATTGCGCCAA...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACCCTTCAGCTCCTGGACTaGTTTCTTCAAAGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: LPRLSGPVIGTAAWPLPTLQLLD*FLQSFY
Trigger: GTAGAAACTTTGAAGAAACAAGTCCAGGAGCTGAAG...GGTGGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTCGGTCTGCCCAGGTaGAGTGGGCCTGTCATAGGA +
Preference number: 5 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHLGLPR*SGPVIG
Trigger: TCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTGGAAAGTTTCCTTTTTaGAAGGCAGAGGAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: CHVTAGSSAVTVGLATLGGKFPF*KAEEED
Trigger: ATCCTCCTCCTCTGCCTTCAAAAAAGGAAACTTTCC...ACCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGCTGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTTGAGGCGAGAGGTAAGACACACCTTGCCCTaGGTCAGGGAACTGCTACCA +
Preference number: 5 (lower is better)
Translates to: GCPEIRAAAKNGALRREVRHTLP*VRELLP
Trigger: TGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCT...TACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCATCTGTAGCTTTCCTTaGCCAAAGGTCAGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: SDALGFAWTESTREAFWAICSFP*PKVSFP
Trigger: TGGGAAACTGACCTTTGGCAAAGGAAAGCTACAGAT...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTACTGCAATCAGGTGGATACAGCTGCAGCCCTGGGGACAGGTCACTTGAACTGTGCTTCACCAGCATCTaGGCTCTTCATCTCCCTACC +
Preference number: 5 (lower is better)
Translates to: LLQSGGYSCSPGDRSLELCFTSI*ALHLPT
Trigger: GGTAGGGAGATGAAGAGCCAAGATGCTGGTGAAGCA...CAGTTCAAGTGACCTGTCCCCAGGGCTGCAGCTGTATCCACCTGATTGCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTTGGTTTAATAGCCAGAGATaGTTTAACAGGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: VSRDSRQLGSYSGPGNPWFNSQR*FNRSSS
Trigger: GCTGGAGGACCTGTTAAACAATCTCTGGCTATTAAA...CCAAGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS CCA 90 bp TTGACAGCTTGCTGCCACTCGATCGGGAGTCAGAGGCACAAGCTTTaGCTACTGACTGTACCAGATGCTCATCATCTGCATTTCGCCAGC +
Preference number: 5 (lower is better)
Translates to: LTACCHSIGSQRHKL*LLTVPDAHHLHFAS
Trigger: GCTGGCGAAATGCAGATGATGAGCATCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTGACTCCCGATCGAGTGGCAGCAAGCTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS CCA 90 bp TCCTCAGAGCAGCATCACCCAGTTCTGGGTCTTGGTGAAGTCCAATaGCTGAGGCCTCAGGTGTCTTCCTCCTGCTCTCCTTTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: SSEQHHPVLGLGEVQ*LRPQVSSSCSPFLR
Trigger: TCTTAGAAAAGGAGAGCAGGAGGAAGACACCTGAGGCCTCAGCCATTGGACTTCACCAAGACCCAGAACTGGGTGATGCTGCTCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp CACTGCCCACCCAGGTCACTGAGCTTCAGTTGGAAGTGGCAGCAATaGGCTTATCCAGTTCAAGGTCAATGCTGGAGCTTGTGGGATGTA +
Preference number: 5 (lower is better)
Translates to: HCPPRSLSFSWKWQQ*AYPVQGQCWSLWDV
Trigger: TACATCCCACAAGCTCCAGCATTGACCTTGAACTGGATAAGCCCATTGCTGCCACTTCCAACTGAAGCTCAGTGACCTGGGTGGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS-3UTR CAA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCGGTGGTCGGATTGCGTaGTTCAGTCTCTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSGGRIA*FSLFSH
Trigger: GTGGCTGAAGAGACTGAACAACGCAATCCGACCACC...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGAAGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTTGCCCTCTTTTAGCGGTGGTCGGATTGCGTaGTTCAGTCTCTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: RRRNSCQVRSLTALPSFSGGRIA*FSLFSH
Trigger: GTGGCTGAAGAGACTGAACAACGCAATCCGACCACC...GCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCGCACAGGTCTCCATGTaGCTCTTTTTCACTGGCATA +
Preference number: 5 (lower is better)
Translates to: SALGEYASSLPSSKGFPTAQVSM*LFFTGI
Trigger: TATGCCAGTGAAAAAGAGCAACATGGAGACCTGTGC...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCACGGTCTCAGATCTCCATACTCCTGGCTCTGACCACCATCCTCCCACCCGGACTGCTCCTGAAGCATTaGACAGAGAAGAATCGAACT +
Preference number: 5 (lower is better)
Translates to: SRSQISILLALTTILPPGLLLKH*TEKNRT
Trigger: AGTTCGATTCTTCTCTGTCAAATGCTTCAGGAGCAG...TCCGGGTGGGAGGATGGTGGTCAGAGCCAGGAGTATGGAGATCTGAGACCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCACACAACTTCACAGTTaGGGTAATACTCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: SDALGFAWTESTREAFWATQLHS*GNTLGI
Trigger: AATGCCCAGAGTATTACCCAAACTGTGAAGTTGTGT...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CCAGCAGCAAAGGGTTCCCAACCAGCTCTGATGTGGCGGTGGCGTGAGGAATGGAGTGATGGAGCCATTTaGTGCTTTCAAGAGCTGATA +
Preference number: 5 (lower is better)
Translates to: PAAKGSQPALMWRWREEWSDGAI*CFQELI
Trigger: TATCAGCTCTTGAAAGCACAAAATGGCTCCATCACT...CCATTCCTCACGCCACCGCCACATCAGAGCTGGTTGGGAACCCTTTGCTGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTGCCCACAAGGAATGCTTCATaGAACTCAAAAGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: GLPRLSGPVIGTAAWPLPTRNAS*NSKEQG
Trigger: TCCTTGCTCTTTTGAGTTCAATGAAGCATTCCTTGT...GGGCAGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCGAATACAGTAGGTTTTaGAAAGCCTTGTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: ALGEYASSLPSSKGFPTSEYSRF*KALLPA
Trigger: GGCAGGCAACAAGGCTTTCAAAAACCTACTGTATTC...GCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCTACCATAGCCAACTTTaGCATCTACTGGGATTGGAA +
Preference number: 5 (lower is better)
Translates to: LYRWFHAPIPKCTGLSVCYHSQL*HLLGLE
Trigger: TTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGTA...GCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCCGGCTCAGTGAGTCCTaGCTCCTACCAGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFRLSES*LLPASP
Trigger: TGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCCG...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTCTTCAGCTCCTGGACTaGTTTCTTCAAAGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSLQLLD*FLQSFY
Trigger: GTAGAAACTTTGAAGAAACAAGTCCAGGAGCTGAAG...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TCCTCTCTGTGTGGAGAGAGGGCGGGAAGGAGACCTCTAGTTGACTGCATAACCCCCACAATTCCACGTTaGATCAACACGGTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SSLCGERAGRRPLVDCITPTIPR*INTVSV
Trigger: GACACTGACCGTGTTGATCAAACGTGGAATTGTGGG...GGTTATGCAGTCAACTAGAGGTCTCCTTCCCGCCCTCTCTCCACACAGAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333027.7
CDS-3UTR CAA 90 bp TCAGTGTCACGTGACAGCAGGCAGCTCGGCAGTTACAGTGGGCCTGGCAACCCTGACTGCATAAACATTTaGACCAGTCTGTACTCATGC +
Preference number: 5 (lower is better)
Translates to: SVSRDSRQLGSYSGPGNPDCINI*TSLYSC
Trigger: GCATGAGTACAGACTGGTCAAAATGTTTATGCAGTC...AGGGTTGCCAGGCCCACTGTAACTGCCGAGCTGCCTGCTGTCACGTGACACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCCCTCAGGGCAATTCCTaGCCTTGGATCCTCACTGCA +
Preference number: 5 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSPQGNS*PWILTA
Trigger: TGCAGTGAGGATCCAAGGCAAGGAATTGCCCTGAGG...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCAGATGCTCTGGGCTTTGCCTGGACTGAGAGCACCAGGGAAGCCTTCTGGGCCTTTAATAGCCAGAGATaGTTTAACAGGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SDALGFAWTESTREAFWAFNSQR*FNRSSS
Trigger: GCTGGAGGACCTGTTAAACAATCTCTGGCTATTAAA...GGCCCAGAAGGCTTCCCTGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGAAATGGATAGTCACTTaGCTCCACAGCCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWKWIVT*LHSPGS
Trigger: GGACCCTGGGCTGTGGAGCAAAGTGACTATCCATTT...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS TCA 90 bp AGAAAGGTCTCCCCCATTGGGAAAGTCTCGAGAAGTGTTCCTAGTTaGCAGCTTGCTGCCACTCGATCGGGAGTCAGAGGCACAAGCTTT +
Preference number: 5 (lower is better)
Translates to: RKVSPIGKVSRSVPS*QLAATRSGVRGTSF
Trigger: AAAGCTTGTGCCTCTGACTCCCGATCGAGTGGCAGCAAGCTGTCAACTAGGAACACTTCTCGAGACTTTCCCAATGGGGGAGACCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS TCA 90 bp CACCGGCCGCTGATCCTGATCCACAGCATGCACTACCAGAAGCGCTaGTTTCAGAAGCACAGACAAGTGATGGAGCCATTTTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: HRPLILIHSMHYQKR*FQKHRQVMEPFCAF
Trigger: GAAAGCACAAAATGGCTCCATCACTTGTCTGTGCTTCTGAAATCAGCGCTTCTGGTAGTGCATGCTGTGGATCAGGATCAGCGGCCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 90 bp GGTCTTGGTGAAGTCCAATGGCTGAGGCCTCAGGTGTCTTCCTCCTaGTCTCCTTTTCTAAGAGAGGGTCCTCTTTACCCTCCTGTATCT +
Preference number: 5 (lower is better)
Translates to: GLGEVQWLRPQVSSS*SPFLREGPLYPPVS
Trigger: AGATACAGGAGGGTAAAGAGGACCCTCTCTTAGAAAAGGAGAGCAGGAGGAAGACACCTGAGGCCTCAGCCATTGGACTTCACCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 90 bp GGTCAATGCTGGAGCTTGTGGGATGTAGGCTGCTATAGCAAGACTTaGATACTCGACTGGGTTCAAAGAGCTGCTGGCTGGGAACTGGAA +
Preference number: 5 (lower is better)
Translates to: GQCWSLWDVGCYSKT*ILDWVQRAAGWELE
Trigger: TTCCAGTTCCCAGCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGTCTTGCTATAGCAGCCTACATCCCACAAGCTCCAGCATTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS-3UTR CAA 90 bp CACTTTCCTTTCCCAAAGAGGCGCCTAAGGGGATGCCATTTACCGTGTGCCTCTTCAGAGGCACAAGCTTaGGCTACTGACTGTACCAGA +
Preference number: 5 (lower is better)
Translates to: HFPFPKRRLRGCHLPCASSEAQA*ATDCTR
Trigger: TCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTGA...AGAGGCACACGGTAAATGGCATCCCCTTAGGCGCCTCTTTGGGAAAGGAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCTCGGTCTGCCCAGGTTGAGTGGGCCTGTCATAGGAACAGCAGCTTGGCCACTAGTGATGGAGCCATTTaGTGCTTTCAAGAGCTGATA +
Preference number: 5 (lower is better)
Translates to: SRSAQVEWACHRNSSLATSDGAI*CFQELI
Trigger: TATCAGCTCTTGAAAGCACAAAATGGCTCCATCACT...AGTGGCCAAGCTGCTGTTCCTATGACAGGCCCACTCAACCTGGGCAGACCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGGCTGTGGTCAGATaGTCGTATGATCTAGTCTTT +
Preference number: 5 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNQAVVR*SYDLVF
Trigger: AAAGACTAGATCATACGACAATCTGACCACAGCCTG...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCACTCCACTCTCCTCTTaGGTGGCCTCCTGCAAGATG +
Preference number: 5 (lower is better)
Translates to: KGMPFTVCLSLQTSASFITPLSS*VASCKM
Trigger: CATCTTGCAGGAGGCCACCAAAGAGGAGAGTGGAGT...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCCCTGTGCTGGCTGAGGAAGAGATTGTTTAGGGGACCAGGCCCCAGAATGGGGTACCATAGCCAACTTTaGCATCTACTGGGATTGGAA +
Preference number: 5 (lower is better)
Translates to: SLCWLRKRLFRGPGPRMGYHSQL*HLLGLE
Trigger: TTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGTA...CCCCATTCTGGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCAGCACAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATCTACCAGCCTCCCCATaGGCGCAATGCCCATTGGGT +
Preference number: 5 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDLPASP*AQCPLG
Trigger: ACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTAG...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGCTCCTCGCAGGAGGGAGATGATGCCCAGGGCAGTGCTCTTGGGGAATATGCTCTTCAGCTCCTGGACTaGTTTCTTCAAAGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: SSSQEGDDAQGSALGEYALQLLD*FLQSFY
Trigger: GTAGAAACTTTGAAGAAACAAGTCCAGGAGCTGAAG...AGCATATTCCCCAAGAGCACTGCCCTGGGCATCATCTCCCTCCTGCGAGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAGGTCAATGCTGGAGCTaGTGGGATGTAGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPGQCWS*WDVGCY
Trigger: ATAGCAGCCTACATCCCACAAGCTCCAGCATTGACC...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GTTTTTGGACCATATCAAAGCTCACTGAGGAAAGGTGCCCTGAATCTCCTCAAGCTCGGTCTGCCCAGGTaGAGTGGGCCTGTCATAGGA +
Preference number: 5 (lower is better)
Translates to: VFGPYQSSLRKGALNLLKLGLPR*SGPVIG
Trigger: TCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG...CTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAGCTTTGATATGGTCCAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACATGGCGTGAGGAATGGTaGCATGTTAGCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: ETHLALGQGTATKGKRNTWREEW*HVSTGF
Trigger: AAAGCCAGTGCTAACATGCAACCATTCCTCACGCCA...TGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTTGGCTGAGGAAGAGATaGTTTAGGGGACCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSWLRKR*FRGPGP
Trigger: GGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCA...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAATGGCTGAGGAAGAGATaGTTTAGGGGACCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQWLRKR*FRGPGP
Trigger: GGGGCCTGGTCCCCTAAACAATCTCTTCCTCAGCCA...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCGGTCTGCCCAGGTTGAGTGATTTAAGGCTGTTTTaGGACCATATCAAAGCTCAC +
Preference number: 5 (lower is better)
Translates to: VPRSHSKVHGPLGLPRLSDLRLF*DHIKAH
Trigger: GTGAGCTTTGATATGGTCCAAAAACAGCCTTAAATC...ACTCAACCTGGGCAGACCGAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAAGATCCCTGACTGCTTaGCCCTCTTTTAGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPRSLTA*PSFSLG
Trigger: TCCCAGGCTAAAAGAGGGCAAAGCAGTCAGGGATCT...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGGGCAATTCCTTGCCTaGGATCCTCACTGCACCTGC +
Preference number: 5 (lower is better)
Translates to: DAIYRVPLPPNISLIYPSGQFLA*DPHCTC
Trigger: GCAGGTGCAGTGAGGATCCAAGGCAAGGAATTGCCC...AGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCAAATGGATAGTCACTTaGCTCCACAGCCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLKWIVT*LHSPGS
Trigger: GGACCCTGGGCTGTGGAGCAAAGTGACTATCCATTT...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAAAAGGCTTCAGTGCAGTaGTGTGCTGGGGACAGCAGG +
Preference number: 5 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQKASVQ*CAGDSR
Trigger: CCTGCTGTCCCCAGCACACAACTGCACTGAAGCCTT...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAAATCTAATAAAGCTTaGAATGGGCCTGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: SALGEYASSLPSSKGFPTKSNKA*NGPGGS
Trigger: GGAGCCTCCAGGCCCATTCAAAGCTTTATTAGATTT...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ACCACCTTCCTGAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAAATCTAATAAAGCTTaGAATGGGCCTGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: TTFLRHTLPLVRELLPRGKSNKA*NGPGGS
Trigger: GGAGCCTCCAGGCCCATTCAAAGCTTTATTAGATTT...TCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS TCA 90 bp CAGGGTACAGCACGGCTTCTGACTGAGAGGAATACAGTAGGTTTTTaGAAGCCTTGTTGCCTGCCCGAAGAAGTGACCACACGGAACATG +
Preference number: 5 (lower is better)
Translates to: QGTARLLTERNTVGF*KPCCLPEEVTTRNM
Trigger: CATGTTCCGTGTGGTCACTTCTTCGGGCAGGCAACAAGGCTTTCAAAAACCTACTGTATTCCTCTCAGTCAGAAGCCGTGCTGTACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 90 bp CTCCTGGACTTGTTTCTTCAAAGTTTCTACTTCCTGCTGGTGGCCTaGCTCAATCTGACGCAGGCGCTGTTGGATCGTGTCTGTGTACAC +
Preference number: 5 (lower is better)
Translates to: LLDLFLQSFYFLLVA*LNLTQALLDRVCVH
Trigger: GTGTACACAGACACGATCCAACAGCGCCTGCGTCAGATTGAGTCAGGCCACCAGCAGGAAGTAGAAACTTTGAAGAAACAAGTCCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 90 bp GTTTATCCACCTGCTCCCAGCTGGCTTCAGAGAAAATCTCTGTGCTaGAGCGAGACAAACAGTTCTGATCCAGATTGCTTTCCGAGTCGG +
Preference number: 5 (lower is better)
Translates to: VYPPAPSWLQRKSLC*SETNSSDPDCFPSR
Trigger: CCGACTCGGAAAGCAATCTGGATCAGAACTGTTTGTCTCGCTGCAGCACAGAGATTTTCTCTGAAGCCAGCTGGGAGCAGGTGGATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS CCA 90 bp AGCTTGTGGGATGTAGGCTGCTATAGCAAGACTTGCATACTCGACTaGGTTCAAAGAGCTGCTGGCTGGGAACTGGAACCTTCTGGTTAC +
Preference number: 5 (lower is better)
Translates to: SLWDVGCYSKTCILD*VQRAAGWELEPSGY
Trigger: GTAACCAGAAGGTTCCAGTTCCCAGCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGTCTTGCTATAGCAGCCTACATCCCACAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS-3UTR CAA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTTCCTAGTTGACAGCTaGCTGCCACTCGATCGGGAG +
Preference number: 5 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLFLVDS*LPLDRE
Trigger: CTCCCGATCGAGTGGCAGCAAGCTGTCAACTAGGAA...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATGAAAGGTCTCCCCCATaGGGAAAGTCTCGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHERSPP*GKSREV
Trigger: CACTTCTCGAGACTTTCCCAATGGGGGAGACCTTTC...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATCTGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTGCTCCTGAAGCATTaGACAGAGAAGAATCGAACT +
Preference number: 5 (lower is better)
Translates to: ICHSVQVVPRSHSKVHGPLLLKH*TEKNRT
Trigger: AGTTCGATTCTTCTCTGTCAAATGCTTCAGGAGCAG...AGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGTTTTTGAAAGCCTTGTaGCCTGCCCGAAGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWFLKAL*PARRSD
Trigger: GTCACTTCTTCGGGCAGGCAACAAGGCTTTCAAAAA...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGCTGCCCTGAAATCAGAGCAGCAGCTAAAAATGGAGCCTTGAGGCGAGAGGTATTTTTGAAAGCCTTGTaGCCTGCCCGAAGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: GCPEIRAAAKNGALRREVFLKAL*PARRSD
Trigger: GTCACTTCTTCGGGCAGGCAACAAGGCTTTCAAAAA...TACCTCTCGCCTCAAGGCTCCATTTTTAGCTGCTGCTCTGATTTCAGGGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TGTCACTCTGTACAGGTGGTTCCACGCTCCCATTCCAAAGTGCACGGGCCTCTCTACCATAGCCAACTTTaGCATCTACTGGGATTGGAA +
Preference number: 5 (lower is better)
Translates to: CHSVQVVPRSHSKVHGPLYHSQL*HLLGLE
Trigger: TTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGTA...GAGAGGCCCGTGCACTTTGGAATGGGAGCGTGGAACCACCTGTACAGAGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGGCCTCTCGACCAGGCTaGTCTCTGAAGGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWASRPG*SLKGWV
Trigger: AACCCAGCCCTTCAGAGACAAGCCTGGTCGAGAGGC...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGCGGCTCAGTGAGTCCTaGCTCCTACCAGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: KINLQSSGASQICHSVQVRLSES*LLPASP
Trigger: TGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCCG...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCTGTGGTGCAAGTTCCTaGAGTGTAAGTGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KGMPFTVCLSLQTSASFICGASS*SVSGQS
Trigger: GCTCTGCCCACTTACACTCAAGGAACTTGCACCACA...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCAGCTCTTCAGCTCCTGGACTaGTTTCTTCAAAGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: LLGNMLPASPAAKGSQPALQLLD*FLQSFY
Trigger: GTAGAAACTTTGAAGAAACAAGTCCAGGAGCTGAAG...AGCTGGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAACATAGGAACAGCAGCTaGGCCACTGCCCACCCAGGT +
Preference number: 5 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKHRNSS*ATAHPG
Trigger: ACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCTATG...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCTGGCGTGAGGAATGGTaGCATGTTAGCACTGGCTTT +
Preference number: 5 (lower is better)
Translates to: RGCHLPCASPSKHQPHLSWREEW*HVSTGF
Trigger: AAAGCCAGTGCTAACATGCAACCATTCCTCACGCCA...GGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCGTATCATAACCTCTaGGCACCTGTCACTAGGAAA +
Preference number: 5 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWPYHNL*APVTRK
Trigger: TTTCCTAGTGACAGGTGCCAAGAGGTTATGATACGG...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGGGCAGCAGAAGAATGATTTCTaGTTTTCAAACGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: HLALGQGTATKGKRNTGQQKNDF*FSNACW
Trigger: CCAGCAGGCGTTTGAAAACAAGAAATCATTCTTCTG...CTGCCCTGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS TCA 90 bp TGTTTCTTCAAAGTTTCTACTTCCTGCTGGTGGCCTGACTCAATCTaGCGCAGGCGCTGTTGGATCGTGTCTGTGTACACTGACATGCCA +
Preference number: 5 (lower is better)
Translates to: CFFKVSTSCWWPDSI*RRRCWIVSVYTDMP
Trigger: TGGCATGTCAGTGTACACAGACACGATCCAACAGCGCCTGCGTCAGATTGAGTCAGGCCACCAGCAGGAAGTAGAAACTTTGAAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 90 bp CTGGCTTCAGAGAAAATCTCTGTGCTGCAGCGAGACAAACAGTTCTaGTCCAGATTGCTTTCCGAGTCGGGGATTGAAGTCACCTCATCC +
Preference number: 5 (lower is better)
Translates to: LASEKISVLQRDKQF*SRLLSESGIEVTSS
Trigger: GGATGAGGTGACTTCAATCCCCGACTCGGAAAGCAATCTGGATCAGAACTGTTTGTCTCGCTGCAGCACAGAGATTTTCTCTGAAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS TCA 90 bp AATGAGGATCAAGAGCAAGCACCCAGCTGGAATACCCAACAGGGCTaGCAGGATCTCCACAAAGAAGCAGCACCAATGGATACAGGTCTA +
Preference number: 5 (lower is better)
Translates to: NEDQEQAPSWNTQQG*QDLHKEAAPMDTGL
Trigger: TAGACCTGTATCCATTGGTGCTGCTTCTTTGTGGAGATCCTGTCAGCCCTGTTGGGTATTCCAGCTGGGTGCTTGCTCTTGATCCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492087.1
CDS GCA 90 bp TTTTGCATCTACTGGGATTGGAAGAACTGCTTCCTCCCTACCCTCTaGAATCTCTTCTATTCGAAACTGCTCCACAGGGACCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: FCIYWDWKNCFLPTL*NLFYSKLLHRDLQG
Trigger: TCCCTGGAGGTCCCTGTGGAGCAGTTTCGAATAGAAGAGATTGCAGAGGGTAGGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp CATGCTCCCCTGGTCTGCACAGGTCTCCATGTTGCTCTTTTTCACTaGCATAGACCTCCATGCACCAAGCATGGTATGCAAATGAGAAGA +
Preference number: 5 (lower is better)
Translates to: HAPLVCTGLHVALFH*HRPPCTKHGMQMRR
Trigger: TCTTCTCATTTGCATACCATGCTTGGTGCATGGAGGTCTATGCCAGTGAAAAAGAGCAACATGGAGACCTGTGCAGACCAGGGGAGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp TCATCCCCAAAGTCTCCATTAAAGTGTAGGGAGCTGGTCAGGTACTaGCTCTCCAGGCGACTCTTCAGCTCCTGGACTTGTTTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SSPKSPLKCRELVRY*LSRRLFSSWTCFFK
Trigger: TTTGAAGAAACAAGTCCAGGAGCTGAAGAGTCGCCTGGAGAGCCAGTACCTGACCAGCTCCCTACACTTTAATGGAGACTTTGGGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp AGACTTGCATACTCGACTGGGTTCAAAGAGCTGCTGGCTGGGAACTaGAACCTTCTGGTTACAACAACTGGAGCAGAATACGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: RLAYSTGFKELLAGN*NLLVTTTGAEYVPT
Trigger: TGTGGGAACGTATTCTGCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCCCAGCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CCA 90 bp TGGCAGCAATGGGCTTATCCAGTTCAAGGTCAATGCTGGAGCTTGTaGGATGTAGGCTGCTATAGCAAGACTTGCATACTCGACTGGGTT +
Preference number: 5 (lower is better)
Translates to: WQQWAYPVQGQCWSL*DVGCYSKTCILDWV
Trigger: AACCCAGTCGAGTATGCAAGTCTTGCTATAGCAGCCTACATCCCACAAGCTCCAGCATTGACCTTGAACTGGATAAGCCCATTGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS-3UTR CAA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCTCAGAGGCACAAGCTTaGGCTACTGACTGTACCAGA +
Preference number: 5 (lower is better)
Translates to: KGMPFTVCLSLQTSASFISEAQA*ATDCTR
Trigger: TCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTGA...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GTTTTTGGACCATATCAAAGCTCACTGAGGAAAGGTGCCCTGAATCTCCTCAAGTTCCTAGTTGACAGCTaGCTGCCACTCGATCGGGAG +
Preference number: 5 (lower is better)
Translates to: VFGPYQSSLRKGALNLLKFLVDS*LPLDRE
Trigger: CTCCCGATCGAGTGGCAGCAAGCTGTCAACTAGGAA...CTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAGCTTTGATATGGTCCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAAGAAAGGTCTCCCCCATaGGGAAAGTCTCGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQERSPP*GKSREV
Trigger: CACTTCTCGAGACTTTCCCAATGGGGGAGACCTTTC...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCACCCACAGACCCATGTGATGGGAGGGATGCCCAACAGTGCTGTAGGGTAAAGACACAACTTCACAGTTaGGGTAATACTCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: SPTDPCDGRDAQQCCRVKTQLHS*GNTLGI
Trigger: AATGCCCAGAGTATTACCCAAACTGTGAAGTTGTGT...CTTTACCCTACAGCACTGTTGGGCATCCCTCCCATCACATGGGTCTGTGGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGCCCAGGAAAGCAACAAGGAATGCTTCATaGAACTCAAAAGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: SVLMPEGGKCYTAWPRKATRNAS*NSKEQG
Trigger: TCCTTGCTCTTTTGAGTTCAATGAAGCATTCCTTGT...TGCTTTCCTGGGCCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CAGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACACAAGGAATGCTTCATaGAACTCAAAAGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: QCSWGICFQPPQQQRVPNTRNAS*NSKEQG
Trigger: TCCTTGCTCTTTTGAGTTCAATGAAGCATTCCTTGT...GTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGCTACCAGCCTCCCCATaGGCGCAATGCCCATTGGGT +
Preference number: 5 (lower is better)
Translates to: KINLQSSGASQICHSVQVLPASP*AQCPLG
Trigger: ACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTAG...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGGGTCAATGCTGGAGCTaGTGGGATGTAGGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLGQCWS*WDVGCY
Trigger: ATAGCAGCCTACATCCCACAAGCTCCAGCATTGACC...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACCTCGGTCTGCCCAGGTaGAGTGGGCCTGTCATAGGA +
Preference number: 5 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYLGLPR*SGPVIG
Trigger: TCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGCTCGGTCTGCCCAGGTaGAGTGGGCCTGTCATAGGA +
Preference number: 5 (lower is better)
Translates to: KINLQSSGASQICHSVQVLGLPR*SGPVIG
Trigger: TCCTATGACAGGCCCACTCAACCTGGGCAGACCGAG...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp GGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCATGATTGGTTTGGTTaGGGAACGGGGGATTTCTGG +
Preference number: 5 (lower is better)
Translates to: GMPFTVCLSLQTSASFIHHDWFG*GTGDFW
Trigger: CCAGAAATCCCCCGTTCCCAAACCAAACCAATCATG...ATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGTGCTCTTGGGGAATATGCTTCCAGCCTCCCCAGCAGCAAAGGGTTCCCAACCGATTTAAGGCTGTTTTaGGACCATATCAAAGCTCAC +
Preference number: 5 (lower is better)
Translates to: SALGEYASSLPSSKGFPTDLRLF*DHIKAH
Trigger: GTGAGCTTTGATATGGTCCAAAAACAGCCTTAAATC...GGTTGGGAACCCTTTGCTGCTGGGGAGGCTGGAAGCATATTCCCCAAGAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTACAGATGCTCTGGGCTTaGCCTGGACTGAGAGCACCA +
Preference number: 5 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLQMLWA*PGLRAP
Trigger: TGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTG...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGAAGGAGGAATAGCTGCCAGGTCAGATCCCTGACTGCTTTGCCCTCTTTTAGCCCGTATCATAACCTCTaGGCACCTGTCACTAGGAAA +
Preference number: 5 (lower is better)
Translates to: RRRNSCQVRSLTALPSFSPYHNL*APVTRK
Trigger: TTTCCTAGTGACAGGTGCCAAGAGGTTATGATACGG...GCTAAAAGAGGGCAAAGCAGTCAGGGATCTGACCTGGCAGCTATTCCTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CATTTATCCATCTGTGAGGGGACTGGCTCAGCTCCTCGCAGGAGGGAGATGATGAGCTCAGCTGGCTCTTaGTGTTTGTATACTTTAGGT +
Preference number: 5 (lower is better)
Translates to: HLSICEGTGSAPRRREMMSSAGS*CLYTLG
Trigger: ACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCT...CATCATCTCCCTCCTGCGAGGAGCTGAGCCAGTCCCCTCACAGATGGATAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCACAGTTCATGCCCTGTaGCTTCAGACCAAATTCCCT +
Preference number: 5 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLTVHAL*LQTKFP
Trigger: AGGGAATTTGGTCTGAAGCAACAGGGCATGAACTGT...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTGAGGTTTCCGAGTCGGGGATaGAAGTCACCTCATCCCCAA +
Preference number: 5 (lower is better)
Translates to: IYRVPLPPNISLIYPSVRFPSRG*KSPHPQ
Trigger: TTGGGGATGAGGTGACTTCAATCCCCGACTCGGAAA...CCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS GCA 90 bp GCTTATCCAGTTCAAGGTCAATGCTGGAGCTTGTGGGATGTAGGCTaGTATAGCAAGACTTGCATACTCGACTGGGTTCAAAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: AYPVQGQCWSLWDVG*YSKTCILDWVQRAA
Trigger: AGCAGCTCTTTGAACCCAGTCGAGTATGCAAGTCTTGCTATAGCAGCCTACATCCCACAAGCTCCAGCATTGACCTTGAACTGGATAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CCA 90 bp ACACGGAACATGTCCGTTCCTGAGTATGCTTTTCCCCTCTCTCCTTaGCGTTGTTGCACAGGAATGTTCCAAACAGGCAGGAATAGGTAT +
Preference number: 5 (lower is better)
Translates to: TRNMSVPEYAFPLSP*RCCTGMFQTGRNRY
Trigger: ATACCTATTCCTGCCTGTTTGGAACATTCCTGTGCAACAACGCCAAGGAGAGAGGGGAAAAGCATACTCAGGAACGGACATGTTCCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp CAAAGAGCTGCTGGCTGGGAACTGGAACCTTCTGGTTACAACAACTaGAGCAGAATACGTTCCCACAATTCCACGTTTGATCAACACGGT +
Preference number: 5 (lower is better)
Translates to: QRAAGWELEPSGYNN*SRIRSHNSTFDQHG
Trigger: ACCGTGTTGATCAAACGTGGAATTGTGGGAACGTATTCTGCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCCCAGCCAGCAGCTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000406629.1
CDS-3UTR CAA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTTCCTAGTTGACAGCTaGCTGCCACTCGATCGGGAG +
Preference number: 5 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGFLVDS*LPLDRE
Trigger: CTCCCGATCGAGTGGCAGCAAGCTGTCAACTAGGAA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTCTCCTTTGGCTCGGTTaGCCACAGCAGCTGCATAGG +
Preference number: 5 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTILLWLG*PQQLHR
Trigger: CCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGAG...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGCTCTCCTTGGCGTTGTaGCACAGGAATGTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLLSLAL*HRNVPN
Trigger: GTTTGGAACATTCCTGTGCAACAACGCCAAGGAGAG...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCCCTCTCTCCTTGGCGTaGTTGCACAGGAATGTTCCA +
Preference number: 5 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFPLSLA*LHRNVP
Trigger: TGGAACATTCCTGTGCAACAACGCCAAGGAGAGAGG...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAATTGCATCTACTGGGATaGGAAGAACTGCTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQLHLLG*EELLPP
Trigger: GGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCAA...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCCGTATCATAACCTCTaGGCACCTGTCACTAGGAAA +
Preference number: 5 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIPYHNL*APVTRK
Trigger: TTTCCTAGTGACAGGTGCCAAGAGGTTATGATACGG...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACAGCTGGCTCTTTGTGTTaGTATACTTTAGGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: ETHLALGQGTATKGKRNTAGSLC*YTLGRR
Trigger: CCTTCTACCTAAAGTATACAAACACAAAGAGCCAGC...TGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GAGACACACCTTGCCCTTGGTCAGGGAACTGCTACCAAGGGGAAGAGGAATACACAGAAGAATGATTTCTaGTTTTCAAACGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: ETHLALGQGTATKGKRNTQKNDF*FSNACW
Trigger: CCAGCAGGCGTTTGAAAACAAGAAATCATTCTTCTG...TGTATTCCTCTTCCCCTTGGTAGCAGTTCCCTGACCAAGGGCAAGGTGTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS GCA 90 bp GAAGCGCTGATTTCAGAAGCACAGACAAGTGATGGAGCCATTTTGTaGTTTCAAGAGCTGATAGCCAATTTCCCGGATCTGGCATCTGAG +
Preference number: 5 (lower is better)
Translates to: EALISEAQTSDGAIL*FQELIANFPDLASE
Trigger: CTCAGATGCCAGATCCGGGAAATTGGCTATCAGCTCTTGAAAGCACAAAATGGCTCCATCACTTGTCTGTGCTTCTGAAATCAGCGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp CTGCATAGGAGCGTGCATCCAAGATCAAAAGCTTCTGCGGTTGGATaGCTAAACTCTCTGCTCCTGAAGCATTTGACAGAGAAGAATCGA +
Preference number: 5 (lower is better)
Translates to: LHRSVHPRSKASAVG*LNSLLLKHLTEKNR
Trigger: TCGATTCTTCTCTGTCAAATGCTTCAGGAGCAGAGAGTTTAGCCATCCAACCGCAGAAGCTTTTGATCTTGGATGCACGCTCCTATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 90 bp TATAGCAAGACTTGCATACTCGACTGGGTTCAAAGAGCTGCTGGCTaGGAACTGGAACCTTCTGGTTACAACAACTGGAGCAGAATACGT +
Preference number: 5 (lower is better)
Translates to: YSKTCILDWVQRAAG*ELEPSGYNNWSRIR
Trigger: ACGTATTCTGCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCCCAGCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGTCTTGCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CCA 90 bp ATACCCAACAGGGCTGACAGGATCTCCACAAAGAAGCAGCACCAATaGATACAGGTCTATCCCAAGAGGACCAATACAGGACTAGACATT +
Preference number: 5 (lower is better)
Translates to: IPNRADRISTKKQHQ*IQVYPKRTNTGLDI
Trigger: AATGTCTAGTCCTGTATTGGTCCTCTTGGGATAGACCTGTATCCATTGGTGCTGCTTCTTTGTGGAGATCCTGTCAGCCCTGTTGGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492087.1
CDS-3UTR CAA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCGAAATCCTCCAGGCGTaGTTCATATCAAAACCCATC +
Preference number: 5 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIEILQA*FISKPI
Trigger: GATGGGTTTTGATATGAACAACGCCTGGAGGATTTC...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAAGTGATGGAGCCATTTaGTGCTTTCAAGAGCTGATA +
Preference number: 5 (lower is better)
Translates to: GDAIYRVPLPPNISLIYPSDGAI*CFQELI
Trigger: TATCAGCTCTTGAAAGCACAAAATGGCTCCATCACT...TGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CATTTTGACCAGTCTGTACTCATGCCTGAGGGTGGGAAGTGCTACACAGCCTGGACAAGGAATGCTTCATaGAACTCAAAAGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: HFDQSVLMPEGGKCYTAWTRNAS*NSKEQG
Trigger: TCCTTGCTCTTTTGAGTTCAATGAAGCATTCCTTGT...CCAGGCTGTGTAGCACTTCCCACCCTCAGGCATGAGTACAGACTGGTCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCGAATACAGTAGGTTTTaGAAAGCCTTGTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIEYSRF*KALLPA
Trigger: GGCAGGCAACAAGGCTTTCAAAAACCTACTGTATTC...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCAGGCTGTGGTCAGATaGTCGTATGATCTAGTCTTT +
Preference number: 5 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIQAVVR*SYDLVF
Trigger: AAAGACTAGATCATACGACAATCTGACCACAGCCTG...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CAAGGCACCCCTCAATACCAACCTTCCCGAGGGAGGAACAGCATAACATATCTCTACCATAGCCAACTTTaGCATCTACTGGGATTGGAA +
Preference number: 5 (lower is better)
Translates to: QGTPQYQPSRGRNSITYLYHSQL*HLLGLE
Trigger: TTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGTA...GAGATATGTTATGCTGTTCCTCCCTCGGGAAGGTTGGTATTGAGGGGTGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACATTCAGAAAGTGACCTTGGCGCAATGCCCATaGGGTGTGGGGTACATCTGG +
Preference number: 5 (lower is better)
Translates to: AGSLCLYTLGRRYIQKVTLAQCP*GVGYIW
Trigger: CCAGATGTACCCCACACCCAATGGGCATTGCGCCAA...GGTCACTTTCTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTGGCTATGCAGCCACTaGTGGTGCAAGTTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGWLCSH*WCKFLE
Trigger: CTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTTGGCTATGCAGCCACTaGTGGTGCAAGTTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWAWLCSH*WCKFLE
Trigger: CTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCA...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATCATGATTGGTTTGGTTaGGGAACGGGGGATTTCTGG +
Preference number: 5 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDHDWFG*GTGDFW
Trigger: CCAGAAATCCCCCGTTCCCAAACCAAACCAATCATG...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATCAGATGCTCTGGGCTTaGCCTGGACTGAGAGCACCA +
Preference number: 5 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDQMLWA*PGLRAP
Trigger: TGGTGCTCTCAGTCCAGGCAAAGCCCAGAGCATCTG...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGTGAGGGCTAAAAATGGAGCCTaGAGGCGAGAGGTAGTTGTA +
Preference number: 5 (lower is better)
Translates to: IYRVPLPPNISLIYPSVRAKNGA*RREVVV
Trigger: TACAACTACCTCTCGCCTCAAGGCTCCATTTTTAGC...CCTCACAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGTCCTCACCATGATCCACCCTGTCACCAGTTAGCAGCTTTCAGCAGAGTCAAGGCTGGCTCTTTGTGTTaGTATACTTTAGGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: SPHHDPPCHQLAAFSRVKAGSLC*YTLGRR
Trigger: CCTTCTACCTAAAGTATACAAACACAAAGAGCCAGC...CTTGACTCTGCTGAAAGCTGCTAACTGGTGACAGGGTGGATCATGGTGAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCCATCTGACAGTTCATGCCCTGTaGCTTCAGACCAAATTCCCT +
Preference number: 5 (lower is better)
Translates to: MPFTVCLSLQTSASFIHLTVHAL*LQTKFP
Trigger: AGGGAATTTGGTCTGAAGCAACAGGGCATGAACTGT...CAGATGGATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TGCCCTGAATCTCCTCAAGGCCATGTCACTTCTCTAAGGAACCCTACGAAGTCAGGGCTCAACAACTGTTaGTGGGTGAAAATGACAGAT +
Preference number: 5 (lower is better)
Translates to: CPESPQGHVTSLRNPTKSGLNNC*WVKMTD
Trigger: ATCTGTCATTTTCACCCACAAACAGTTGTTGAGCCC...TGACTTCGTAGGGTTCCTTAGAGAAGTGACATGGCCTTGAGGAGATTCAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS TCA 90 bp ACAGCATGCACTACCAGAAGCGCTGATTTCAGAAGCACAGACAAGTaGTGGAGCCATTTTGTGCTTTCAAGAGCTGATAGCCAATTTCCC +
Preference number: 5 (lower is better)
Translates to: TACTTRSADFRSTDK*WSHFVLSRADSQFP
Trigger: GGGAAATTGGCTATCAGCTCTTGAAAGCACAAAATGGCTCCATCACTTGTCTGTGCTTCTGAAATCAGCGCTTCTGGTAGTGCATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp TTCAAATCAGCCCTCATTCCCAAAAGATCAATAGAGGTCAGGGCTAGAGTTAACTGTGGTGCAAGTTCCTaGAGTGTAAGTGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: FKSALIPKRSIEVRARVNCGASS*SVSGQS
Trigger: GCTCTGCCCACTTACACTCAAGGAACTTGCACCACA...GTTAACTCTAGCCCTGACCTCTATTGATCTTTTGGGAATGAGGGCTGATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAAGGAAAGTTTCCTTTTTaGAAGGCAGAGGAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQGKFPF*KAEEED
Trigger: ATCCTCCTCCTCTGCCTTCAAAAAAGGAAACTTTCC...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTTCCTAGGCCATGCCAGTGTTTTAATTTGCTGGAGACTAGCCCACAGGAACAAGGAAAGTTTCCTTTTTaGAAGGCAGAGGAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: LPRPCQCFNLLETSPQEQGKFPF*KAEEED
Trigger: ATCCTCCTCCTCTGCCTTCAAAAAAGGAAACTTTCC...TTGTTCCTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCATGGCCTAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAGGGGATGCCATTTACCGTGTGCCTCTCCCTCCAAACATCAGCCTCATTTATCGACTGCATAAACATTTaGACCAGTCTGTACTCATGC +
Preference number: 5 (lower is better)
Translates to: KGMPFTVCLSLQTSASFIDCINI*TSLYSC
Trigger: GCATGAGTACAGACTGGTCAAAATGTTTATGCAGTC...GATAAATGAGGCTGATGTTTGGAGGGAGAGGCACACGGTAAATGGCATCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTTTCCTGAGACACACCTaGCCCTTGGTCAGGGAACTG +
Preference number: 5 (lower is better)
Translates to: SSIRPTFSLPARLDDTECFLRHT*PLVREL
Trigger: CAGTTCCCTGACCAAGGGCAAGGTGTGTCTCAGGAA...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATGCCAAGATTACAAAGCACAAACCTAACTCTTCTCCAACCTTCCCCACACCTACACGTTCAAACTGTGTaGCCACTGGAAGTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: MPRLQSTNLTLLQPSPHLHVQTV*PLEVRD
Trigger: GTCTCTGACTTCCAGTGGCAACACAGTTTGAACGTG...TAGGTGTGGGGAAGGTTGGAGAAGAGTTAGGTTTGTGCTTTGTAATCTTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GTTTTTGGACCATATCAAAGCTCACTGAGGAAAGGTGCCCTGAATCTCCTCAAGTGCCAGTGTTTTAATTaGCTGGAGACTAGCCCACAG +
Preference number: 5 (lower is better)
Translates to: VFGPYQSSLRKGALNLLKCQCFN*LETSPQ
Trigger: CTGTGGGCTAGTCTCCAGCAAATTAAAACACTGGCA...CTTGAGGAGATTCAGGGCACCTTTCCTCAGTGAGCTTTGATATGGTCCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp ATAGTGGCTGTGTGTAGACACGATGGCCATGGCACACACTCATGGTTTTCACAAGGGCTCAACAACTGTTaGTGGGTGAAAATGACAGAT +
Preference number: 5 (lower is better)
Translates to: IVAVCRHDGHGTHSWFSQGLNNC*WVKMTD
Trigger: ATCTGTCATTTTCACCCACAAACAGTTGTTGAGCCC...TTGTGAAAACCATGAGTGTGTGCCATGGCCATCGTGTCTACACACAGCCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAAGGTGGTCGGATTGCGTaGTTCAGTCTCTTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKGGRIA*FSLFSH
Trigger: GTGGCTGAAGAGACTGAACAACGCAATCCGACCACC...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAGGGACGAAGAGGGGATAAACCACAGGGCAAAGAATTAGGAAGTGTTAGCAAAGCACAGGTCTCCATGTaGCTCTTTTTCACTGGCATA +
Preference number: 5 (lower is better)
Translates to: KGRRGDKPQGKELGSVSKAQVSM*LFFTGI
Trigger: TATGCCAGTGAAAAAGAGCAACATGGAGACCTGTGC...TTTGCTAACACTTCCTAATTCTTTGCCCTGTGGTTTATCCCCTCTTCGTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGTCAGAGGCACAAGCTTaGGCTACTGACTGTACCAGA +
Preference number: 5 (lower is better)
Translates to: KINLQSSGASQICHSVQVSEAQA*ATDCTR
Trigger: TCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTGA...CACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp ATTCTACCCCTTAAAGGGAAGATCCATGATTGGTTTGGTTTGGGAACGGGGGATCTGCTCCTGAAGCATTaGACAGAGAAGAATCGAACT +
Preference number: 5 (lower is better)
Translates to: ILPLKGKIHDWFGLGTGDLLLKH*TEKNRT
Trigger: AGTTCGATTCTTCTCTGTCAAATGCTTCAGGAGCAG...ATCCCCCGTTCCCAAACCAAACCAATCATGGATCTTCCCTTTAAGGGGTAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TTCAAATCAGCCCTCATTCCCAAAAGATCAATAGAGGTCAGGGCTAGAGTTAACCTCTCCTTGGCGTTGTaGCACAGGAATGTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: FKSALIPKRSIEVRARVNLSLAL*HRNVPN
Trigger: GTTTGGAACATTCCTGTGCAACAACGCCAAGGAGAG...GTTAACTCTAGCCCTGACCTCTATTGATCTTTTGGGAATGAGGGCTGATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp GCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACATTCAGAAAGTGACCCCTCTCTCCTTGGCGTaGTTGCACAGGAATGTTCCA +
Preference number: 5 (lower is better)
Translates to: AGSLCLYTLGRRYIQKVTPLSLA*LHRNVP
Trigger: TGGAACATTCCTGTGCAACAACGCCAAGGAGAGAGG...GGTCACTTTCTGAATGTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATTGTGGTGCAAGTTCCTaGAGTGTAAGTGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDCGASS*SVSGQS
Trigger: GCTCTGCCCACTTACACTCAAGGAACTTGCACCACA...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTCGGAAAGTTTCCTTTTTaGAAGGCAGAGGAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: SIYNPVVHPKSVTLYRWFGKFPF*KAEEED
Trigger: ATCCTCCTCCTCTGCCTTCAAAAAAGGAAACTTTCC...GAACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 90 bp CAGCAACCGCAGAGACTGAAAACTCCTCCGAATAGAATGAATGTTTaGCATCCCCATAAACACAACTTCACAGTTTGGGTAATACTCTGG +
Preference number: 5 (lower is better)
Translates to: QQPQRLKTPPNRMNV*HPHKHNFTVWVILW
Trigger: CCAGAGTATTACCCAAACTGTGAAGTTGTGTTTATGGGGATGGCAAACATTCATTCTATTCGGAGGAGTTTTCAGTCTCTGCGGTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTGAAATCCTCCAGGCGTaGTTCATATCAAAACCCATC +
Preference number: 5 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGEILQA*FISKPI
Trigger: GATGGGTTTTGATATGAACAACGCCTGGAGGATTTC...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTGAAATCCTCCAGGCGTaGTTCATATCAAAACCCATC +
Preference number: 5 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWAEILQA*FISKPI
Trigger: GATGGGTTTTGATATGAACAACGCCTGGAGGATTTC...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTTACTTCTCATTGATGTaGGAAATCCTCCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGYFSLM*EILQAL
Trigger: CAACGCCTGGAGGATTTCCAACATCAATGAGAAGTA...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp ACTAGAACCAGCTCAGCTGGCTCTTTGTGTTTGTATACTTTAGGTAGAAGGTACTACTTCTCATTGATGTaGGAAATCCTCCAGGCGTTG +
Preference number: 5 (lower is better)
Translates to: TRTSSAGSLCLYTLGRRYYFSLM*EILQAL
Trigger: CAACGCCTGGAGGATTTCCAACATCAATGAGAAGTA...GTACCTTCTACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCTGGTTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTACACAACTTCACAGTTaGGGTAATACTCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWATQLHS*GNTLGI
Trigger: AATGCCCAGAGTATTACCCAAACTGTGAAGTTGTGT...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTACACAACTTCACAGTTaGGGTAATACTCTGGGCATT +
Preference number: 5 (lower is better)
Translates to: NQSTIQWCIPNLSLCTGGTQLHS*GNTLGI
Trigger: AATGCCCAGAGTATTACCCAAACTGTGAAGTTGTGT...ACCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS-3UTR CAA 90 bp CCATGGCACACACTCATGGTTTTCACAACTTCATATGAATACACAGACTGGGCTAGCTCAGCTGGCTCTTaGTGTTTGTATACTTTAGGT +
Preference number: 5 (lower is better)
Translates to: PWHTLMVFTTSYEYTDWASSAGS*CLYTLG
Trigger: ACCTAAAGTATACAAACACAAAGAGCCAGCTGAGCT...AGCCCAGTCTGTGTATTCATATGAAGTTGTGAAAACCATGAGTGTGTGCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAATCAATCTACAATCCAGTGGTGCATCCCAAATCTGTCACTCTGTACAGGTGGTATCTGGTCCTGCCCTaGAGAAATCTTGTCAGTAAT +
Preference number: 5 (lower is better)
Translates to: KSIYNPVVHPKSVTLYRWYLVLP*RNLVSN
Trigger: ATTACTGACAAGATTTCTCAAGGGCAGGACCAGATA...CCACCTGTACAGAGTGACAGATTTGGGATGCACCACTGGATTGTAGATTGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp CTAGAAATTAAACAGCTGGGACTCCTGCCACATTATCCAAAAGTCCAAATGGATGAAATCCTCCAGGCGTaGTTCATATCAAAACCCATC +
Preference number: 5 (lower is better)
Translates to: LEIKQLGLLPHYPKVQMDEILQA*FISKPI
Trigger: GATGGGTTTTGATATGAACAACGCCTGGAGGATTTC...ATCCATTTGGACTTTTGGATAATGTGGCAGGAGTCCCAGCTGTTTAATTTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAAGGGTTATATGTACAGCTATGGAGAGTTACGGTTCCTCCTTTAACAAAGGAAGAATACAGTAGGTTTTaGAAAGCCTTGTTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: KGLYVQLWRVTVPPLTKEEYSRF*KALLPA
Trigger: GGCAGGCAACAAGGCTTTCAAAAACCTACTGTATTC...TTCCTTTGTTAAAGGAGGAACCGTAACTCTCCATAGCTGTACATATAACCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp TCTTCAATTAGACCAACTTTTTCCCTACCTGCACGACTAGATGACACAGAATGTGACTGCATAAACATTTaGACCAGTCTGTACTCATGC +
Preference number: 5 (lower is better)
Translates to: SSIRPTFSLPARLDDTECDCINI*TSLYSC
Trigger: GCATGAGTACAGACTGGTCAAAATGTTTATGCAGTC...ACATTCTGTGTCATCTAGTCGTGCAGGTAGGGAAAAAGTTGGTCTAATTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AGAACCAATGCTGTTACAATAGGCAAGCACTACTGTCAGCAGCAACATACCATTGATTTAAGGCTGTTTTaGGACCATATCAAAGCTCAC +
Preference number: 5 (lower is better)
Translates to: RTNAVTIGKHYCQQQHTIDLRLF*DHIKAH
Trigger: GTGAGCTTTGATATGGTCCAAAAACAGCCTTAAATC...AATGGTATGTTGCTGCTGACAGTAGTGCTTGCCTATTGTAACAGCATTGGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AAAAGAGCTAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAACTTCAGCTCCTGGACTaGTTTCTTCAAAGTTTCTAC +
Preference number: 5 (lower is better)
Translates to: KRAKSCKHLFTLYIRPKKLQLLD*FLQSFY
Trigger: GTAGAAACTTTGAAGAAACAAGTCCAGGAGCTGAAG...TTTCTTGGGTCTGATGTACAGTGTGAATAAATGCTTGCAGCTCTTAGCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000401950.7
CDS-3UTR CAA 90 bp AACATACCATTTATTTCTTCAACAGCATCTGAGCCTCATGGGTTATGTTTTCATATCTGTAGCTTTCCTTaGCCAAAGGTCAGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: NIPFISSTASEPHGLCFHICSFP*PKVSFP
Trigger: TGGGAAACTGACCTTTGGCAAAGGAAAGCTACAGAT...ATGAAAACATAACCCATGAGGCTCAGATGCTGTTGAAGAAATAAATGGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000401950.7
CDS TCA 90 bp GCCATATCTGCTAGCATAATCACAATGAAAGTACAAAGACCAAGGTaGACAGGCAGAAAAGCTCAAGGAAACAATATTGATCTTAAAAAG +
Preference number: 5 (lower is better)
Translates to: AISASIITMKVQRPR*TGRKAQGNNIDLKK
Trigger: CTTTTTAAGATCAATATTGTTTCCTTGAGCTTTTCTGCCTGTTCACCTTGGTCTTTGTACTTTCATTGTGATTATGCTAGCAGATATGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480776.1
CDS CCA 72 bp GTGAGCGCCGGTGCTCCTGCCACTTCTCGTTCAGGCTaGGGTCGCTGCAGCGCCGGCTGGCCAGAGGCACTG +
Preference number: 6 (lower is better)
Translates to: VSAGAPATSRSG*GRCSAGWPEAL
Trigger: CAGTGCCTCTGGCCAGCCGGCGCTGCAGCGACCCCAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000492087.1
CDS GCA 72 bp GCCAGGCTGCTCAGCTCTAGTGAGCGCCGGTGCTCCTaGCACTTCTCGTTCAGGCTGGGGTCGCTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: ARLLSSSERRCS*HFSFRLGSLQR
Trigger: GCGCTGCAGCGACCCCAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTCACTAGAGCTGAGCAGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000492087.1
CDS GCA 72 bp GGGCCAGCCAGGCTGCTCAGCTCTAGTGAGCGCCGGTaGTCCTGCCACTTCTCGTTCAGGCTGGGGTCGCTG +
Preference number: 6 (lower is better)
Translates to: GPARLLSSSERR*SCHFSFRLGSL
Trigger: CAGCGACCCCAGCCTGAACGAGAAGTGGCAGGAGCACCGGCGCTCACTAGAGCTGAGCAGCCTGGCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000492087.1
CDS CAA 72 bp CCAGGTGGCTGCGGGAAGGCTGGTCGGGGCTGCTGGTaGCAGATGGCCTTCCTGAGTGGCTATGCAGCCACT +
Preference number: 6 (lower is better)
Translates to: PGGCGKAGRGCW*QMAFLSGYAAT
Trigger: AGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCAACCAGCAGCCCCGACCAGCCTTCCCGCAGCCACCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp CATCGTCCAGGTGGCTGCGGGAAGGCTGGTCGGGGCTaGTGGTTGCAGATGGCCTTCCTGAGTGGCTATGCA +
Preference number: 6 (lower is better)
Translates to: HRPGGCGKAGRG*WLQMAFLSGYA
Trigger: TGCATAGCCACTCAGGAAGGCCATCTGCAACCAGCAGCCCCGACCAGCCTTCCCGCAGCCACCTGGACGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 72 bp ACTTCTCGTTCAGGCTGGGGTCGCTGCAGCGCCGGCTaGCCAGAGGCACTGTGTTGTCACAGGCTGTGGTCA +
Preference number: 6 (lower is better)
Translates to: TSRSGWGRCSAG*PEALCCHRLWS
Trigger: TGACCACAGCCTGTGACAACACAGTGCCTCTGGCCAGCCGGCGCTGCAGCGACCCCAGCCTGAACGAGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000492087.1
CDS CAA 90 bp CATCATCGTCCAGGTGGCTGCGGGAAGGCTGGTCGGGGCTGCTGGTaGCAGATGGCCTTCCTGAGTGGCTATGCAGCCACTTGTGGTGCA +
Preference number: 6 (lower is better)
Translates to: HHRPGGCGKAGRGCW*QMAFLSGYAATCGA
Trigger: TGCACCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCAACCAGCAGCCCCGACCAGCCTTCCCGCAGCCACCTGGACGATGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 72 bp TGGTGCACAGCTGTCGTCCACAGGGGTGGTTGGGGATaGGCAGGGCAGGTACACTGCACTCCACAGCATCAG +
Preference number: 6 (lower is better)
Translates to: WCTAVVHRGGWG*AGQVHCTPQHQ
Trigger: CTGATGCTGTGGAGTGCAGTGTACCTGCCCTGCCCATCCCCAACCACCCCTGTGGACGACAGCTGTGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000492087.1
CDS CCA 72 bp CCATTGGCGCAATGCCCATTGGGTGTGGGGTACATCTaGAGGGTGCTAAGACCTGGGGGCTGCTCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: PLAQCPLGVGYI*RVLRPGGCSEA
Trigger: GGCCTCAGAGCAGCCCCCAGGTCTTAGCACCCTCCAGATGTACCCCACACCCAATGGGCATTGCGCCAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp CACAGGGGTGGTTGGGGATGGGCAGGGCAGGTACACTaGACTCCACAGCATCAGGTTACGCACATGGCACAC +
Preference number: 6 (lower is better)
Translates to: HRGGWGWAGQVH*TPQHQVTHMAH
Trigger: GTGTGCCATGTGCGTAACCTGATGCTGTGGAGTGCAGTGTACCTGCCCTGCCCATCCCCAACCACCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000492087.1
CDS CCA 72 bp CTTGGGGCCTCTCGACCAGGCTTGTCTCTGAAGGGCTaGGTTCCATGGTCTGAGGAAGCCTGTCCTTGCCAC +
Preference number: 6 (lower is better)
Translates to: LGASRPGLSLKG*VPWSEEACPCH
Trigger: GTGGCAAGGACAGGCTTCCTCAGACCATGGAACCCAGCCCTTCAGAGACAAGCCTGGTCGAGAGGCCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 72 bp CTGCCAAGGGAAGTCCTATGCACCACAGACCCCACTTaGGGCCTCTCGACCAGGCTTGTCTCTGAAGGGCTG +
Preference number: 6 (lower is better)
Translates to: LPREVLCTTDPT*GLSTRLVSEGL
Trigger: CAGCCCTTCAGAGACAAGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGTGCATAGGACTTCCCTTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 72 bp GCACCACAGACCCCACTTGGGGCCTCTCGACCAGGCTaGTCTCTGAAGGGCTGGGTTCCATGGTCTGAGGAA +
Preference number: 6 (lower is better)
Translates to: APQTPLGASRPG*SLKGWVPWSEE
Trigger: TTCCTCAGACCATGGAACCCAGCCCTTCAGAGACAAGCCTGGTCGAGAGGCCCCAAGTGGGGTCTGTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 72 bp CGGCTCAGTGAGTCCTTGCTCCTACCAGCCTCCCCATaGGCGCAATGCCCATTGGGTGTGGGGTACATCTGG +
Preference number: 6 (lower is better)
Translates to: RLSESLLLPASP*AQCPLGVGYIW
Trigger: CCAGATGTACCCCACACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 72 bp AGAGCTGCAGCTCATAGCAGACAGCTGACGGCTCAGTaGGTCCTTGCTCCTACCAGCCTCCCCATTGGCGCA +
Preference number: 6 (lower is better)
Translates to: RAAAHSRQLTAQ*VLAPTSLPIGA
Trigger: TGCGCCAATGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCCGTCAGCTGTCTGCTATGAGCTGCAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 72 bp CTGACGCAGGCGCTGTTGGATCGTGTCTGTGTACACTaGCATGCCATCATCGTCCAGGTGGCTGCGGGAAGG +
Preference number: 6 (lower is better)
Translates to: LTQALLDRVCVH*HAIIVQVAAGR
Trigger: CCTTCCCGCAGCCACCTGGACGATGATGGCATGTCAGTGTACACAGACACGATCCAACAGCGCCTGCGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp GAGTCCTTGCTCCTACCAGCCTCCCCATTGGCGCAATaGCCATTGGGTGTGGGGTACATCTGGAGGGTGCTA +
Preference number: 6 (lower is better)
Translates to: ESLLLPASPLAQ*PLGVGYIWRVL
Trigger: TAGCACCCTCCAGATGTACCCCACACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTAGGAGCAAGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp GCAGGCGCTGTTGGATCGTGTCTGTGTACACTGACATaGCATCATCGTCCAGGTGGCTGCGGGAAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: AGAVGSCLCTLT*HHRPGGCGKAG
Trigger: ACCAGCCTTCCCGCAGCCACCTGGACGATGATGGCATGTCAGTGTACACAGACACGATCCAACAGCGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 72 bp GGCTCAGTGAGTCCTTGCTCCTACCAGCCTCCCCATTaGCGCAATGCCCATTGGGTGTGGGGTACATCTGGA +
Preference number: 6 (lower is better)
Translates to: GSVSPCSYQPPH*RNAHWVWGTSG
Trigger: TCCAGATGTACCCCACACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTAGGAGCAAGGACTCACTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 90 bp GGGCTGCTGGTTGCAGATGGCCTTCCTGAGTGGCTATGCAGCCACTaGTGGTGCAAGTTCCTTGAGTGTAAGTGGGCAGAGCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: GLLVADGLPEWLCSH*WCKFLECKWAELQL
Trigger: GAGCTGCAGCTCTGCCCACTTACACTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCAACCAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 72 bp TGTAAGTGGGCAGAGCTGCAGCTCATAGCAGACAGCTaGCGGCTCAGTGAGTCCTTGCTCCTACCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: CKWAELQLIADS*RLSESLLLPAS
Trigger: GGAGGCTGGTAGGAGCAAGGACTCACTGAGCCGTCAGCTGTCTGCTATGAGCTGCAGCTCTGCCCACTTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 72 bp ACTCTGGGCATTCGCAGCCTCCTCCTTTGGCTCGGTTaGCCACAGCAGCTGCATAGGAGCGTGCATCCAAGA +
Preference number: 6 (lower is better)
Translates to: TLGIRSLLLWLG*PQQLHRSVHPR
Trigger: TCTTGGATGCACGCTCCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCGAATGCCCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 72 bp TTGCTCCTACCAGCCTCCCCATTGGCGCAATGCCCATaGGGTGTGGGGTACATCTGGAGGGTGCTAAGACCT +
Preference number: 6 (lower is better)
Translates to: LLLPASPLAQCP*GVGYIWRVLRP
Trigger: AGGTCTTAGCACCCTCCAGATGTACCCCACACCCAATGGGCATTGCGCCAATGGGGAGGCTGGTAGGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 72 bp CTCCTCAGAGCAGCATCACCCAGTTCTGGGTCTTGGTaGAGTCCAATGGCTGAGGCCTCAGGTGTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LLRAASPSSGSW*SPMAEASGVFL
Trigger: GAGGAAGACACCTGAGGCCTCAGCCATTGGACTTCACCAAGACCCAGAACTGGGTGATGCTGCTCTGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 72 bp AGGAACAGCAGCTTGGCCACTGCCCACCCAGGTCACTaGGCTTCAGTTGGAAGTGGCAGCAATGGGCTTATC +
Preference number: 6 (lower is better)
Translates to: RNSSLATAHPGH*ASVGSGSNGLI
Trigger: GATAAGCCCATTGCTGCCACTTCCAACTGAAGCTCAGTGACCTGGGTGGGCAGTGGCCAAGCTGCTGTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS GCA 72 bp TGGGCGGCCAGGTGGTCAGGAAGCCAACGGGTCATCTaGAAAACAGATGGGACCAGGTTACTGACAGGAGAT +
Preference number: 6 (lower is better)
Translates to: WAARWSGSQRVI*KTDGTRLLTGD
Trigger: ATCTCCTGTCAGTAACCTGGTCCCATCTGTTTTGCAGATGACCCGTTGGCTTCCTGACCACCTGGCCGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491251.1
CDS CCA 72 bp TGTGGGCAGGTTCCTCTACTCCACTCTCCTCTTTGGTaGCCTCCTGCAAGATGTTCTCCATCTGCCCCTCAG +
Preference number: 6 (lower is better)
Translates to: CGQVPLLHSPLW*PPARCSPSAPQ
Trigger: CTGAGGGGCAGATGGAGAACATCTTGCAGGAGGCCACCAAAGAGGAGAGTGGAGTAGAGGAACCTGCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 72 bp CAGCATCACCCAGTTCTGGGTCTTGGTGAAGTCCAATaGCTGAGGCCTCAGGTGTCTTCCTCCTGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: QHHPVLGLGEVQ*LRPQVSSSCSP
Trigger: AGGAGAGCAGGAGGAAGACACCTGAGGCCTCAGCCATTGGACTTCACCAAGACCCAGAACTGGGTGATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 72 bp TCCCCCATTGGGAAAGTCTCGAGAAGTGTTCCTAGTTaGCAGCTTGCTGCCACTCGATCGGGAGTCAGAGGC +
Preference number: 6 (lower is better)
Translates to: SPIGKVSRSVPS*QLAATRSGVRG
Trigger: GCCTCTGACTCCCGATCGAGTGGCAGCAAGCTGTCAACTAGGAACACTTCTCGAGACTTTCCCAATGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS GCA 72 bp GCAGCCTCCTCCTTTGGCTCGGTTTGCCACAGCAGCTaGATAGGAGCGTGCATCCAAGATCAAAAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: AASSFGSVCHSS*IGACIQDQKLL
Trigger: CAGAAGCTTTTGATCTTGGATGCACGCTCCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp GATGGCCTTCCTGAGTGGCTATGCAGCCACTTGTGGTaGAAGTTCCTTGAGTGTAAGTGGGCAGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: DGLPEWLCSHLW*KFLECKWAELQ
Trigger: CTGCAGCTCTGCCCACTTACACTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp GGGCTGCTGGTTGCAGATGGCCTTCCTGAGTGGCTATaGAGCCACTTGTGGTGCAAGTTCCTTGAGTGTAAG +
Preference number: 6 (lower is better)
Translates to: GLLVADGLPEWL*SHLWCKFLECK
Trigger: CTTACACTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCAACCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp AGAATACGTTCCCACAATTCCTGCAGTGGTGCTTCCTaGTGGCAAGCCAGAAGGCACTGTCGCACGCATAGC +
Preference number: 6 (lower is better)
Translates to: RIRSHNSCSGAS*WQARRHCRTHS
Trigger: GCTATGCGTGCGACAGTGCCTTCTGGCTTGCCAGCAGGAAGCACCACTGCAGGAATTGTGGGAACGTATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000351488.7
ENST00000401950.7
ENST00000491251.1
CDS CCA 72 bp ATGCCCTGTGAGAACAGAGGCCAGCTCATATCCAGATaGCTCCTCAGAGCAGCATCACCCAGTTCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: MPCENRGQLISR*LLRAASPSSGS
Trigger: AGACCCAGAACTGGGTGATGCTGCTCTGAGGAGCCATCTGGATATGAGCTGGCCTCTGTTCTCACAGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 72 bp GCAGATGGCCTTCCTGAGTGGCTATGCAGCCACTTGTaGTGCAAGTTCCTTGAGTGTAAGTGGGCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: ADGLPEWLCSHL*CKFLECKWAEL
Trigger: CAGCTCTGCCCACTTACACTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp TTTGGCTCGGTTTGCCACAGCAGCTGCATAGGAGCGTaGATCCAAGATCAAAAGCTTCTGCGGTTGGATGGC +
Preference number: 6 (lower is better)
Translates to: FGSVCHSSCIGA*IQDQKLLRLDG
Trigger: GCCATCCAACCGCAGAAGCTTTTGATCTTGGATGCACGCTCCTATGCAGCTGCTGTGGCAAACCGAGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 72 bp CACTGCCCACCCAGGTCACTGAGCTTCAGTTGGAAGTaGCAGCAATGGGCTTATCCAGTTCAAGGTCAATGC +
Preference number: 6 (lower is better)
Translates to: HCPPRSLSFSWK*QQWAYPVQGQC
Trigger: GCATTGACCTTGAACTGGATAAGCCCATTGCTGCCACTTCCAACTGAAGCTCAGTGACCTGGGTGGGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CAA 72 bp GCCAGAGGCACTGTGTTGTCACAGGCTGTGGTCAGATaGTCGTATGATCTAGTCTTTGGTAGCCGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: ARGTVLSQAVVR*SYDLVFGSRLR
Trigger: CCTGAGCCGGCTACCAAAGACTAGATCATACGACAATCTGACCACAGCCTGTGACAACACAGTGCCTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000492087.1
CDS CAA 72 bp GTTGCAGATGGCCTTCCTGAGTGGCTATGCAGCCACTaGTGGTGCAAGTTCCTTGAGTGTAAGTGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: VADGLPEWLCSH*WCKFLECKWAE
Trigger: CTCTGCCCACTTACACTCAAGGAACTTGCACCACAAGTGGCTGCATAGCCACTCAGGAAGGCCATCTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 90 bp GTTGACAGCTTGCTGCCACTCGATCGGGAGTCAGAGGCACAAGCTTaGGCTACTGACTGTACCAGATGCTCATCATCTGCATTTCGCCAG +
Preference number: 6 (lower is better)
Translates to: VDSLLPLDRESEAQA*ATDCTRCSSSAFRQ
Trigger: CTGGCGAAATGCAGATGATGAGCATCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTGACTCCCGATCGAGTGGCAGCAAGCTGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS CAA 90 bp TCTCCCCCATTGGGAAAGTCTCGAGAAGTGTTCCTAGTTGACAGCTaGCTGCCACTCGATCGGGAGTCAGAGGCACAAGCTTTGGCTACT +
Preference number: 6 (lower is better)
Translates to: SPPLGKSREVFLVDS*LPLDRESEAQALAT
Trigger: AGTAGCCAAAGCTTGTGCCTCTGACTCCCGATCGAGTGGCAGCAAGCTGTCAACTAGGAACACTTCTCGAGACTTTCCCAATGGGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS CAA 90 bp TTGGGTAATACTCTGGGCATTCGCAGCCTCCTCCTTTGGCTCGGTTaGCCACAGCAGCTGCATAGGAGCGTGCATCCAAGATCAAAAGCT +
Preference number: 6 (lower is better)
Translates to: LGNTLGIRSLLLWLG*PQQLHRSVHPRSKA
Trigger: AGCTTTTGATCTTGGATGCACGCTCCTATGCAGCTGCTGTGGCAAACCGAGCCAAAGGAGGAGGCTGCGAATGCCCAGAGTATTACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 72 bp CAAGAGCAAGCACCCAGCTGGAATACCCAACAGGGCTaGCAGGATCTCCACAAAGAAGCAGCACCAATGGAT +
Preference number: 6 (lower is better)
Translates to: QEQAPSWNTQQG*QDLHKEAAPMD
Trigger: ATCCATTGGTGCTGCTTCTTTGTGGAGATCCTGTCAGCCCTGTTGGGTATTCCAGCTGGGTGCTTGCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492087.1
CDS GCA 72 bp GAAGTCCAATGGCTGAGGCCTCAGGTGTCTTCCTCCTaGTCTCCTTTTCTAAGAGAGGGTCCTCTTTACCCT +
Preference number: 6 (lower is better)
Translates to: EVQWLRPQVSSS*SPFLREGPLYP
Trigger: AGGGTAAAGAGGACCCTCTCTTAGAAAAGGAGAGCAGGAGGAAGACACCTGAGGCCTCAGCCATTGGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp TGGAGCTTGTGGGATGTAGGCTGCTATAGCAAGACTTaGATACTCGACTGGGTTCAAAGAGCTGCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: WSLWDVGCYSKT*ILDWVQRAAGW
Trigger: CCAGCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGTCTTGCTATAGCAGCCTACATCCCACAAGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS GCA 72 bp AGCCAACGGGTCATCTCTGTGTCCTGTTTATCCACCTaGTCCCAGCTGGCTTCAGAGAAAATCTCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: SQRVISVSCLST*SQLASEKISVL
Trigger: CAGCACAGAGATTTTCTCTGAAGCCAGCTGGGAGCAGGTGGATAAACAGGACACAGAGATGACCCGTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS CCA 72 bp TGCTGCCACTCGATCGGGAGTCAGAGGCACAAGCTTTaGCTACTGACTGTACCAGATGCTCATCATCTGCAT +
Preference number: 6 (lower is better)
Translates to: CCHSIGSQRHKL*LLTVPDAHHLH
Trigger: ATGCAGATGATGAGCATCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTGACTCCCGATCGAGTGGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS CCA 72 bp TCTCGACCAGGCTTGTCTCTGAAGGGCTGGGTTCCATaGTCTGAGGAAGCCTGTCCTTGCCACTATTTACAA +
Preference number: 6 (lower is better)
Translates to: SRPGLSLKGWVP*SEEACPCHYLQ
Trigger: TTGTAAATAGTGGCAAGGACAGGCTTCCTCAGACCATGGAACCCAGCCCTTCAGAGACAAGCCTGGTCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 72 bp CCCAGGTCACTGAGCTTCAGTTGGAAGTGGCAGCAATaGGCTTATCCAGTTCAAGGTCAATGCTGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: PRSLSFSWKWQQ*AYPVQGQCWSL
Trigger: CAAGCTCCAGCATTGACCTTGAACTGGATAAGCCCATTGCTGCCACTTCCAACTGAAGCTCAGTGACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CAA 72 bp TTGCTGCCACTCGATCGGGAGTCAGAGGCACAAGCTTaGGCTACTGACTGTACCAGATGCTCATCATCTGCA +
Preference number: 6 (lower is better)
Translates to: LLPLDRESEAQA*ATDCTRCSSSA
Trigger: TGCAGATGATGAGCATCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTGACTCCCGATCGAGTGGCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS CAA 72 bp TTGGGAAAGTCTCGAGAAGTGTTCCTAGTTGACAGCTaGCTGCCACTCGATCGGGAGTCAGAGGCACAAGCT +
Preference number: 6 (lower is better)
Translates to: LGKSREVFLVDS*LPLDRESEAQA
Trigger: AGCTTGTGCCTCTGACTCCCGATCGAGTGGCAGCAAGCTGTCAACTAGGAACACTTCTCGAGACTTTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS TCA 72 bp ACTCGATCGGGAGTCAGAGGCACAAGCTTTGGCTACTaGCTGTACCAGATGCTCATCATCTGCATTTCGCCA +
Preference number: 6 (lower is better)
Translates to: TRSGVRGTSFGY*LYQMLIICISP
Trigger: TGGCGAAATGCAGATGATGAGCATCTGGTACAGTCAGTAGCCAAAGCTTGTGCCTCTGACTCCCGATCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS CCA 72 bp ATGTCCGTTCCTGAGTATGCTTTTCCCCTCTCTCCTTaGCGTTGTTGCACAGGAATGTTCCAAACAGGCAGG +
Preference number: 6 (lower is better)
Translates to: MSVPEYAFPLSP*RCCTGMFQTGR
Trigger: CCTGCCTGTTTGGAACATTCCTGTGCAACAACGCCAAGGAGAGAGGGGAAAAGCATACTCAGGAACGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 72 bp ACTTGCATACTCGACTGGGTTCAAAGAGCTGCTGGCTaGGAACTGGAACCTTCTGGTTACAACAACTGGAGC +
Preference number: 6 (lower is better)
Translates to: TCILDWVQRAAG*ELEPSGYNNWS
Trigger: GCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCCCAGCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CCA 72 bp GATGTAGGCTGCTATAGCAAGACTTGCATACTCGACTaGGTTCAAAGAGCTGCTGGCTGGGAACTGGAACCT +
Preference number: 6 (lower is better)
Translates to: DVGCYSKTCILD*VQRAAGWELEP
Trigger: AGGTTCCAGTTCCCAGCCAGCAGCTCTTTGAACCCAGTCGAGTATGCAAGTCTTGCTATAGCAGCCTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CCA 72 bp GCTGGCTGGGAACTGGAACCTTCTGGTTACAACAACTaGAGCAGAATACGTTCCCACAATTCCTGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: AGWELEPSGYNN*SRIRSHNSCSG
Trigger: ACCACTGCAGGAATTGTGGGAACGTATTCTGCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCCCAGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323630.9
ENST00000351488.7
ENST00000401950.7
ENST00000491251.1
CDS CAA 72 bp AGTTACATGCTCCCCTGGTCTGCACAGGTCTCCATGTaGCTCTTTTTCACTGGCATAGACCTCCATGCACCA +
Preference number: 6 (lower is better)
Translates to: SYMLPWSAQVSM*LFFTGIDLHAP
Trigger: TGGTGCATGGAGGTCTATGCCAGTGAAAAAGAGCAACATGGAGACCTGTGCAGACCAGGGGAGCATGTAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 90 bp GGGAAGGTAGCAGAGAACATGACTGTGAGGTACCATAGCCAACTTTaGCATCTACTGGGATTGGAAGAACTGCTTCCTCCCTACCCTCTG +
Preference number: 6 (lower is better)
Translates to: GKVAENMTVRYHSQL*HLLGLEELLPPYPL
Trigger: CAGAGGGTAGGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGTACCTCACAGTCATGTTCTCTGCTACCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 90 bp AAGTGGCAGCAATGGGCTTATCCAGTTCAAGGTCAATGCTGGAGCTaGTGGGATGTAGGCTGCTATAGCAAGACTTGCATACTCGACTGG +
Preference number: 6 (lower is better)
Translates to: KWQQWAYPVQGQCWS*WDVGCYSKTCILDW
Trigger: CCAGTCGAGTATGCAAGTCTTGCTATAGCAGCCTACATCCCACAAGCTCCAGCATTGACCTTGAACTGGATAAGCCCATTGCTGCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS TCA 72 bp GGGCAACGTTCATTCAGATCATCCGAGTTCTCCCCATaGCCACACCGGTCAGCAAATTTATGGCCAAAATCC +
Preference number: 6 (lower is better)
Translates to: GQRSFRSSEFSP*PHRSANLWPKS
Trigger: GGATTTTGGCCATAAATTTGCTGACCGGTGTGGTCATGGGGAGAACTCGGATGATCTGAATGAACGTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp AAGTGGCAGCAATGGGCTTATCCAGTTCAAGGTCAATaGTGGAGCTTGTGGGATGTAGGCTGCTATAGCAAG +
Preference number: 6 (lower is better)
Translates to: KWQQWAYPVQGQ*WSLWDVGCYSK
Trigger: CTTGCTATAGCAGCCTACATCCCACAAGCTCCAGCATTGACCTTGAACTGGATAAGCCCATTGCTGCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS GCA 72 bp CCTGCTCCCAGCTGGCTTCAGAGAAAATCTCTGTGCTaGAGCGAGACAAACAGTTCTGATCCAGATTGCTTT +
Preference number: 6 (lower is better)
Translates to: PAPSWLQRKSLC*SETNSSDPDCF
Trigger: AAAGCAATCTGGATCAGAACTGTTTGTCTCGCTGCAGCACAGAGATTTTCTCTGAAGCCAGCTGGGAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS CCA 72 bp TACTCGACTGGGTTCAAAGAGCTGCTGGCTGGGAACTaGAACCTTCTGGTTACAACAACTGGAGCAGAATAC +
Preference number: 6 (lower is better)
Translates to: YSTGFKELLAGN*NLLVTTTGAEY
Trigger: GTATTCTGCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCCCAGCCAGCAGCTCTTTGAACCCAGTCGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CCA 72 bp TGGCAGCAATGGGCTTATCCAGTTCAAGGTCAATGCTaGAGCTTGTGGGATGTAGGCTGCTATAGCAAGACT +
Preference number: 6 (lower is better)
Translates to: WQQWAYPVQGQC*SLWDVGCYSKT
Trigger: AGTCTTGCTATAGCAGCCTACATCCCACAAGCTCCAGCATTGACCTTGAACTGGATAAGCCCATTGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CAA 72 bp GAAGAATCGAACTCCACGTCAGAAAGGTCTCCCCCATaGGGAAAGTCTCGAGAAGTGTTCCTAGTTGACAGC +
Preference number: 6 (lower is better)
Translates to: EESNSTSERSPP*GKSREVFLVDS
Trigger: GCTGTCAACTAGGAACACTTCTCGAGACTTTCCCAATGGGGGAGACCTTTCTGACGTGGAGTTCGATTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS CAA 90 bp TTTGACAGAGAAGAATCGAACTCCACGTCAGAAAGGTCTCCCCCATaGGGAAAGTCTCGAGAAGTGTTCCTAGTTGACAGCTTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: FDREESNSTSERSPP*GKSREVFLVDSLLP
Trigger: TGGCAGCAAGCTGTCAACTAGGAACACTTCTCGAGACTTTCCCAATGGGGGAGACCTTTCTGACGTGGAGTTCGATTCTTCTCTGTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS TCA 72 bp CTGATCCTGATCCACAGCATGCACTACCAGAAGCGCTaGTTTCAGAAGCACAGACAAGTGATGGAGCCATTT +
Preference number: 6 (lower is better)
Translates to: LILIHSMHYQKR*FQKHRQVMEPF
Trigger: AAATGGCTCCATCACTTGTCTGTGCTTCTGAAATCAGCGCTTCTGGTAGTGCATGCTGTGGATCAGGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 72 bp GAGAAAATCTCTGTGCTGCAGCGAGACAAACAGTTCTaGTCCAGATTGCTTTCCGAGTCGGGGATTGAAGTC +
Preference number: 6 (lower is better)
Translates to: EKISVLQRDKQF*SRLLSESGIEV
Trigger: GACTTCAATCCCCGACTCGGAAAGCAATCTGGATCAGAACTGTTTGTCTCGCTGCAGCACAGAGATTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323630.9
ENST00000401950.7
CDS GCA 72 bp GTTCAAGGTCAATGCTGGAGCTTGTGGGATGTAGGCTaGTATAGCAAGACTTGCATACTCGACTGGGTTCAA +
Preference number: 6 (lower is better)
Translates to: VQGQCWSLWDVG*YSKTCILDWVQ
Trigger: TTGAACCCAGTCGAGTATGCAAGTCTTGCTATAGCAGCCTACATCCCACAAGCTCCAGCATTGACCTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CCA 72 bp AGCGTGCATCCAAGATCAAAAGCTTCTGCGGTTGGATaGCTAAACTCTCTGCTCCTGAAGCATTTGACAGAG +
Preference number: 6 (lower is better)
Translates to: SVHPRSKASAVG*LNSLLLKHLTE
Trigger: CTCTGTCAAATGCTTCAGGAGCAGAGAGTTTAGCCATCCAACCGCAGAAGCTTTTGATCTTGGATGCACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 72 bp GCTGGCTGGGAACTGGAACCTTCTGGTTACAACAACTaGAGCAGAATACGTTCCCACAATTCCACGTTTGAT +
Preference number: 6 (lower is better)
Translates to: AGWELEPSGYNN*SRIRSHNSTFD
Trigger: ATCAAACGTGGAATTGTGGGAACGTATTCTGCTCCAGTTGTTGTAACCAGAAGGTTCCAGTTCCCAGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333027.7
ENST00000406629.1
CDS CCA 72 bp TGGGCTTATCCAGTTCAAGGTCAATGCTGGAGCTTGTaGGATGTAGGCTGCTATAGCAAGACTTGCATACTC +
Preference number: 6 (lower is better)
Translates to: WAYPVQGQCWSL*DVGCYSKTCIL
Trigger: GAGTATGCAAGTCTTGCTATAGCAGCCTACATCCCACAAGCTCCAGCATTGACCTTGAACTGGATAAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CCA 72 bp CAGTGGAATGAAGTTTCTAACTGTAAGCCACTGGATTaGCCCAACTCAGGGAGAGTCCAAAAAGCCGGCAAA +
Preference number: 6 (lower is better)
Translates to: QWNEVSNCKPLD*PNSGRVQKAGK
Trigger: TTTGCCGGCTTTTTGGACTCTCCCTGAGTTGGGCCAATCCAGTGGCTTACAGTTAGAAACTTCATTCCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487907.1
CDS CAA 72 bp GCGGTTGGATGGCTAAACTCTCTGCTCCTGAAGCATTaGACAGAGAAGAATCGAACTCCACGTCAGAAAGGT +
Preference number: 6 (lower is better)
Translates to: AVGWLNSLLLKH*TEKNRTPRQKG
Trigger: ACCTTTCTGACGTGGAGTTCGATTCTTCTCTGTCAAATGCTTCAGGAGCAGAGAGTTTAGCCATCCAACCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000487907.1
CDS CAA 72 bp GTGAGGTACCATAGCCAACTTTTGCATCTACTGGGATaGGAAGAACTGCTTCCTCCCTACCCTCTGCAATCT +
Preference number: 6 (lower is better)
Translates to: VRYHSQLLHLLG*EELLPPYPLQS
Trigger: AGATTGCAGAGGGTAGGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGTACCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 72 bp GCAGAGAACATGACTGTGAGGTACCATAGCCAACTTTaGCATCTACTGGGATTGGAAGAACTGCTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: AENMTVRYHSQL*HLLGLEELLPP
Trigger: GGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGTACCTCACAGTCATGTTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 90 bp CCAGAAGCGCTGATTTCAGAAGCACAGACAAGTGATGGAGCCATTTaGTGCTTTCAAGAGCTGATAGCCAATTTCCCGGATCTGGCATCT +
Preference number: 6 (lower is better)
Translates to: PEALISEAQTSDGAI*CFQELIANFPDLAS
Trigger: AGATGCCAGATCCGGGAAATTGGCTATCAGCTCTTGAAAGCACAAAATGGCTCCATCACTTGTCTGTGCTTCTGAAATCAGCGCTTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 72 bp CAATGGGCTTATCCAGTTCAAGGTCAATGCTGGAGCTaGTGGGATGTAGGCTGCTATAGCAAGACTTGCATA +
Preference number: 6 (lower is better)
Translates to: QWAYPVQGQCWS*WDVGCYSKTCI
Trigger: TATGCAAGTCTTGCTATAGCAGCCTACATCCCACAAGCTCCAGCATTGACCTTGAACTGGATAAGCCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000491251.1
CDS CAA 90 bp AACATGACTGTGAGGTACCATAGCCAACTTTTGCATCTACTGGGATaGGAAGAACTGCTTCCTCCCTACCCTCTGCAATCTCTTCTATTC +
Preference number: 6 (lower is better)
Translates to: NMTVRYHSQLLHLLG*EELLPPYPLQSLLF
Trigger: GAATAGAAGAGATTGCAGAGGGTAGGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCAAAAGTTGGCTATGGTACCTCACAGTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS TCA 72 bp ACTACCAGAAGCGCTGATTTCAGAAGCACAGACAAGTaGTGGAGCCATTTTGTGCTTTCAAGAGCTGATAGC +
Preference number: 6 (lower is better)
Translates to: TTRSADFRSTDK*WSHFVLSRADS
Trigger: GCTATCAGCTCTTGAAAGCACAAAATGGCTCCATCACTTGTCTGTGCTTCTGAAATCAGCGCTTCTGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp ATAGCCAACTTTTGCATCTACTGGGATTGGAAGAACTaGTTCCTCCCTACCCTCTGCAATCTCTTCTATTCG +
Preference number: 6 (lower is better)
Translates to: IANFCIYWDWKN*FLPTLCNLFYS
Trigger: CGAATAGAAGAGATTGCAGAGGGTAGGGAGGAAGCAGTTCTTCCAATCCCAGTAGATGCAAAAGTTGGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CCA 72 bp TATTTCAGTGGAATGAAGTTTCTAACTGTAAGCCACTaGATTGGCCCAACTCAGGGAGAGTCCAAAAAGCCG +
Preference number: 6 (lower is better)
Translates to: YFSGMKFLTVSH*IGPTQGESKKP
Trigger: CGGCTTTTTGGACTCTCCCTGAGTTGGGCCAATCCAGTGGCTTACAGTTAGAAACTTCATTCCACTGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487907.1
CDS GCA 72 bp CTCCATGTTGCTCTTTTTCACTGGCATAGACCTCCATaGACCAAGCATGGTATGCAAATGAGAAGAGATCTT +
Preference number: 6 (lower is better)
Translates to: LHVALFHWHRPP*TKHGMQMRRDL
Trigger: AAGATCTCTTCTCATTTGCATACCATGCTTGGTGCATGGAGGTCTATGCCAGTGAAAAAGAGCAACATGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
ENST00000415511.1
CDS GCA 72 bp ATTTCAGAAGCACAGACAAGTGATGGAGCCATTTTGTaGTTTCAAGAGCTGATAGCCAATTTCCCGGATCTG +
Preference number: 6 (lower is better)
Translates to: ISEAQTSDGAIL*FQELIANFPDL
Trigger: CAGATCCGGGAAATTGGCTATCAGCTCTTGAAAGCACAAAATGGCTCCATCACTTGTCTGTGCTTCTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS CAA 72 bp TTGTACTTCTCATTGATGTTGGAAATCCTCCAGGCGTaGTTCATATCAAAACCCATCCTCTCCACCTCGTTT +
Preference number: 6 (lower is better)
Translates to: LYFSLMLEILQA*FISKPILSTSF
Trigger: AAACGAGGTGGAGAGGATGGGTTTTGATATGAACAACGCCTGGAGGATTTCCAACATCAATGAGAAGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1
CDS GCA 72 bp CAGAGACTGAAAACTCCTCCGAATAGAATGAATGTTTaGCATCCCCATAAACACAACTTCACAGTTTGGGTA +
Preference number: 6 (lower is better)
Translates to: QRLKTPPNRMNV*HPHKHNFTVWV
Trigger: TACCCAAACTGTGAAGTTGTGTTTATGGGGATGGCAAACATTCATTCTATTCGGAGGAGTTTTCAGTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323630.9
ENST00000333027.7
ENST00000351488.7
ENST00000401950.7
ENST00000406629.1